BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015614
(403 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147837952|emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]
Length = 1071
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/401 (72%), Positives = 336/401 (83%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
M V + K TMIC PLM QSVEQ++ +M++AK EGAD+VE+RLD INNF P +DLEIIL
Sbjct: 1 MDDVGVLKKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIIL 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
KPLPV+IVYRPKW GG YEGDEH RLEALHLAE LGADY+DFELKVAS+ LGKQ
Sbjct: 61 RNKPLPVMIVYRPKWEGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQ 120
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
S +R IVSC +D TP EDL V+ +Q+TGAD+IKLV + +ITEI +IF LLSHCQ
Sbjct: 121 HSSSRTIVSCYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQ 180
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV 240
+P+IAYS+G+RG +SQ+L KF G LVYGS++G+PV GLPT+ESLR+ YKV++IN DTKV
Sbjct: 181 MPLIAYSIGDRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKV 240
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FGLISKPVGHSKGPILHNP FRHVNYNGIYVPM VDDLK+FFS YSSPDFAGFSVG PYK
Sbjct: 241 FGLISKPVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYK 300
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EAV FCDE+HPLAQ+I AVNTI+RRPSDGKLIGYNTDCEASITAIEDA++ERG NG A
Sbjct: 301 EAVTGFCDELHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEA 360
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
SPL G+ FVL GAGGAGRALAFGA+SRGA++VIFD+DF
Sbjct: 361 PLNSPLTGKQFVLVGAGGAGRALAFGARSRGAQLVIFDLDF 401
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/403 (50%), Positives = 276/403 (68%), Gaps = 8/403 (1%)
Query: 3 VVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK 62
V + N T +C PLM +VEQ+L+ M +AK GAD+VEIRLDC+ NF P +DL+I++ +
Sbjct: 555 VSGVRSNPTFLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQ 614
Query: 63 KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS 122
PLP L+ YRP W GG YEGDE+KR +AL LA +LGA Y+D EL+VA Y
Sbjct: 615 SPLPTLVTYRPIWEGGQYEGDENKRQDALRLAMELGASYIDVELEVAHEFNNSIYGKKPQ 674
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP 182
+ IVS + TPS E +G LV+R+QA+GADI+K+ + DIT++AR+ Q+ H QVP
Sbjct: 675 NFKVIVSSHNFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVP 734
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKV 240
IA +GERGL+S+LLSPKF G L YG+L+ + G PT + L Y I DTKV
Sbjct: 735 TIAIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKV 794
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF-AGFSVGFPY 299
+G+I KPVGHSK P+L N F+ V N +YV + VDD++KFF+TYS+PDF +G S P+
Sbjct: 795 YGIIGKPVGHSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPH 854
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KE +K D + P+A+ I A+N I+R+P DGKL +NTD +I AIED ++E NG+
Sbjct: 855 KEVAIKCMDTIDPIARKIGAINNIVRKP-DGKLTAFNTDYIGAIEAIEDGLRE---SNGS 910
Query: 360 A-SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
+ + GSPLAG++FV+ GAGGAG++LA+GAK +GARVV+ + F
Sbjct: 911 SPAVGSPLAGKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTF 953
>gi|225451144|ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic [Vitis vinifera]
gi|298204989|emb|CBI34296.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/401 (72%), Positives = 336/401 (83%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
M V + K TMIC PLM QSVEQ++ +M++AK EGAD+VE+RLD INNF P +DLEIIL
Sbjct: 1 MDDVGVLKKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIIL 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
KPLPV+IVYRPKW GG YEGDEH RLEALHLAE LGADY+DFELKVAS+ LGKQ
Sbjct: 61 RNKPLPVMIVYRPKWEGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQ 120
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
S +R IVSC +D TP EDL V+ +Q+TGAD+IKLV + +ITEI +IF LLSHCQ
Sbjct: 121 HSSSRTIVSCYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQ 180
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV 240
+P+IAYS+G+RG +SQ+L KF G LVYGS++G+PV GLPT+ESLR+ YKV++IN DTKV
Sbjct: 181 MPLIAYSIGDRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKV 240
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FGLISKPVGHSKGPILHNP FRHVNYNGIYVPM VDDLK+FFS YSSPDFAGFSVG PYK
Sbjct: 241 FGLISKPVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYK 300
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EAV FCDE+HPLAQ+I AVNTI+RRPSDGKLIGYNTDCEASITAIEDA++ERG NG A
Sbjct: 301 EAVTGFCDELHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEA 360
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
SPL G+ FVL GAGGAGRALAFGA+SRGA++VIFD+DF
Sbjct: 361 PLNSPLTGKQFVLVGAGGAGRALAFGARSRGAQLVIFDLDF 401
>gi|255542470|ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548259|gb|EEF49750.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 519
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 288/401 (71%), Positives = 344/401 (85%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
MG V ++ M+C PLMAQSVEQ++S+MY AK +GADVVE+RLD I+NFQP +DL+ IL
Sbjct: 1 MGSVGELTSSVMVCTPLMAQSVEQMISDMYNAKTQGADVVEVRLDYIDNFQPPQDLQAIL 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
KPLPV+IVYRPK GGLYEGDE RLEAL LA LGADYVDFELKVAS+++G+ +H
Sbjct: 61 RNKPLPVIIVYRPKSEGGLYEGDEPTRLEALRLAYVLGADYVDFELKVASDLIGELKGTH 120
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
+G++ IVSC ++ + P++E+L LV+ MQATGADIIKLV + N+ITE+ RIF L+ HCQ
Sbjct: 121 HTGSKVIVSCYVNGDMPTKENLSQLVASMQATGADIIKLVSTANNITELDRIFHLILHCQ 180
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV 240
VPIIAYSVGERGL+SQLLSPKF G+L+YGS++G+ + GLPT++SLR+ YKV +IN+DTKV
Sbjct: 181 VPIIAYSVGERGLISQLLSPKFGGSLLYGSMEGSSIPGLPTLDSLREAYKVAYINSDTKV 240
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FGL+SKPV HSKGP+LHNPTFRH NYNG YVPMFVDDLK+FFS YSSPDFAGFSVGFPYK
Sbjct: 241 FGLVSKPVSHSKGPLLHNPTFRHANYNGTYVPMFVDDLKEFFSVYSSPDFAGFSVGFPYK 300
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EAV++FCDEVHPLA++I AVNTIIRRP DGKLIG+NTDCEA+ITAIEDA+KE+GY +G
Sbjct: 301 EAVVEFCDEVHPLAKSIGAVNTIIRRPGDGKLIGHNTDCEAAITAIEDALKEQGYMDGRT 360
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
S SPL GR FVL GAGGAGRALAFGAKSRGAR+VIFDID
Sbjct: 361 SSNSPLTGRQFVLVGAGGAGRALAFGAKSRGARIVIFDIDL 401
>gi|224130894|ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222838117|gb|EEE76482.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 518
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/401 (70%), Positives = 341/401 (85%), Gaps = 1/401 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
MG V + N+ M+CAPLMAQSVEQ++ +M+ AKA+GADVVE+RLDCI+ FQP +DLE I+
Sbjct: 1 MGSVGVLTNSVMVCAPLMAQSVEQMVIDMHSAKAQGADVVEVRLDCISKFQPRQDLETII 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
KPLPV+IVYRPKW GG YEGDEH+RLEAL LA DLGADY+D ELKVAS ++ + + H
Sbjct: 61 RNKPLPVIIVYRPKWEGGQYEGDEHRRLEALRLANDLGADYIDLELKVASELIWELKNKH 120
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
Q+G + IVS L+ TPS+E+L +LV+ MQAT ADIIK+V + +DITE+ RIF LLSHC+
Sbjct: 121 QNGGKVIVSSYLNGATPSKENLSHLVATMQATEADIIKVVSNADDITEMERIFHLLSHCE 180
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV 240
VP +AYSVGERGL+SQLL PKF GALVYGS++G + GLPT++SLR+ YKV+ IN+DTKV
Sbjct: 181 VPAVAYSVGERGLISQLLCPKFGGALVYGSMEGNSIPGLPTLDSLREAYKVDCINSDTKV 240
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FGL+SKPVGHSKGP+LHNPT RHVN+NGIYVPMFVDDLKKFF Y+SPDFAG+SVGFPYK
Sbjct: 241 FGLVSKPVGHSKGPLLHNPTLRHVNFNGIYVPMFVDDLKKFFDVYASPDFAGYSVGFPYK 300
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EAV++FCDEVHPLA+ I AVNTIIRRP DGKLIGYNTDCE SITAIEDA++++ Y NG
Sbjct: 301 EAVVQFCDEVHPLAKCIGAVNTIIRRPCDGKLIGYNTDCEGSITAIEDALRDQKYVNGR- 359
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
S SPLAG+ FV+ GAGGAGRA+A GAKSRGAR++IFDID
Sbjct: 360 SLNSPLAGKQFVVVGAGGAGRAIAVGAKSRGARLIIFDIDL 400
>gi|224125426|ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222857959|gb|EEE95506.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 518
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 279/401 (69%), Positives = 338/401 (84%), Gaps = 1/401 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
MG I N+TM+CAPLMA+SVEQ++ +M A+A+GAD VE+RLD IN+FQP +DLE I+
Sbjct: 1 MGRAGILANSTMVCAPLMARSVEQMVIDMQSAEAQGADAVEVRLDYINSFQPSQDLETII 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
KPLPV+IVYRP+W GG YEGDEH RLEAL LA +LGADY+D ELKVAS+++ + + H
Sbjct: 61 RNKPLPVIIVYRPRWEGGQYEGDEHTRLEALRLAHELGADYIDVELKVASDLVREVKNKH 120
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
Q+G + IVS L TPS+EDL +LV+ MQAT ADIIK+V + NDITE+ RIF LLSH Q
Sbjct: 121 QTGGKVIVSSYLSGATPSKEDLSHLVASMQATKADIIKVVSNANDITELDRIFHLLSHMQ 180
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV 240
VP +AYS+GERGL+SQLL PKF GALVYG+++G + GLPT++SLR+ YKVE+IN+DTKV
Sbjct: 181 VPAVAYSLGERGLISQLLCPKFGGALVYGAMEGNSIPGLPTLDSLREAYKVENINSDTKV 240
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FGL+SKPV HSKGPILHNP FRH N+NGIYVPMFVDDLK+FF Y+SPDFAG+SVGFPYK
Sbjct: 241 FGLVSKPVSHSKGPILHNPAFRHANFNGIYVPMFVDDLKEFFEVYASPDFAGYSVGFPYK 300
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EAV++FCDEVHPLA++I AVNTIIR+PSDGKLIGYNTDCE SI +IEDA+K++ Y NG A
Sbjct: 301 EAVVQFCDEVHPLAKSIGAVNTIIRKPSDGKLIGYNTDCEGSIASIEDALKDQRYING-A 359
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
S SPLAG+ FV+ GAGGAGRA+A GAKSRGARV+IFDID
Sbjct: 360 SLNSPLAGKQFVVVGAGGAGRAIAVGAKSRGARVIIFDIDL 400
>gi|356504076|ref|XP_003520825.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 524
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/406 (69%), Positives = 328/406 (80%), Gaps = 5/406 (1%)
Query: 1 MGVVNITKNTTMICAPLMAQ---SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLE 57
MG + K++ M+CA + S EQ+++ M+QAKAEGAD+VE+RLDCI NF DL+
Sbjct: 1 MGSNQVWKHSVMVCAAITTHQYVSAEQIVNGMHQAKAEGADIVELRLDCITNFHSHHDLK 60
Query: 58 IILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGK 115
IIL KPLPVLIV RPKW GGLYEGDE+KRLEAL LA +L AD++D ELK AS + L +
Sbjct: 61 IILQNKPLPVLIVNRPKWEGGLYEGDENKRLEALQLAVELSADFIDVELKAASCLPTLVE 120
Query: 116 QYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQL 175
+H S + IVSC +D TP E L LV MQATGADIIKLV DITEI RIF L
Sbjct: 121 HMRNHNSHGKIIVSCYVDGTTPPHEVLLQLVELMQATGADIIKLVTLAADITEIKRIFSL 180
Query: 176 LSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235
+CQVP+IAYSVGERGL+SQLLSPKF G VYGSL G P+ GLP+++S+++ YK+EH+N
Sbjct: 181 FLYCQVPLIAYSVGERGLISQLLSPKFGGFFVYGSLAGNPIPGLPSLDSIQEAYKLEHVN 240
Query: 236 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSV 295
ADTKVFGLISKPV HS+GPILHNP+F+ VNYNGIYVPMFVDDLKKFFSTY SPDF+GFSV
Sbjct: 241 ADTKVFGLISKPVSHSRGPILHNPSFKDVNYNGIYVPMFVDDLKKFFSTYPSPDFSGFSV 300
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
G PYKE V++FCDEVHPLAQ+I AVNTIIRRP DGKL+GYNTDCEA+ITAIEDA+ E G
Sbjct: 301 GIPYKEEVLRFCDEVHPLAQSIGAVNTIIRRPRDGKLVGYNTDCEAAITAIEDALIEHGC 360
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
+G AS GSPLAGR+FVL GAGGAG+ALAFGAKSRGAR+VIFDIDF
Sbjct: 361 NDGEASLGSPLAGRLFVLVGAGGAGKALAFGAKSRGARLVIFDIDF 406
>gi|57920902|gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 2
[Nicotiana tabacum]
Length = 521
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/404 (68%), Positives = 324/404 (80%), Gaps = 4/404 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
MG V + KN+ M+CAPLMA SVEQ++ M QAKA+GAD+VEIRLD INNFQP KDL+++L
Sbjct: 1 MGSVGLLKNSAMVCAPLMAPSVEQLVHGMLQAKAQGADLVEIRLDGINNFQPQKDLQVLL 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDE---HKRLEALHLAEDLGADYVDFELKVASNILGKQY 117
PLPVLIVYRP W G +E D+ HK+LE L A++LGADY++ +LK+AS+ K+
Sbjct: 61 NNNPLPVLIVYRPIWEGNEFEEDDDHIHKQLEVLRWAKELGADYIELDLKIASDFTKKEK 120
Query: 118 SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLS 177
SG + I SC +D T S+EDL +V+ MQ+TGADI+K+V + NDITE+ ++F LLS
Sbjct: 121 PRWSSGCKVIASCFVDNVT-SKEDLSQVVAHMQSTGADILKIVTNANDITELEKMFHLLS 179
Query: 178 HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD 237
HCQVP+IAYS+GERGL+SQLL PKF LVYGSL V GLPT+ SLRQ Y V+ ++ D
Sbjct: 180 HCQVPLIAYSLGERGLISQLLGPKFGSVLVYGSLDCNAVPGLPTLGSLRQAYGVDFMDTD 239
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 297
TKVFGLISKPVGHSKGPILHNPTFRHV YNGIYVPMFVDDLK+FF YSSPDFAGFSVG
Sbjct: 240 TKVFGLISKPVGHSKGPILHNPTFRHVGYNGIYVPMFVDDLKEFFRVYSSPDFAGFSVGI 299
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
PYKEAV+ FCDEV PLA++I AVNTII+RP DGKLIGYNTDCEASITAIEDA+K G N
Sbjct: 300 PYKEAVVSFCDEVDPLAKSIGAVNTIIQRPCDGKLIGYNTDCEASITAIEDALKVNGLTN 359
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
G A SPLAG++FVL GAGGAGRALAFGAKSR A +VIFDIDF
Sbjct: 360 GAAFLPSPLAGKLFVLVGAGGAGRALAFGAKSRRAEIVIFDIDF 403
>gi|356573042|ref|XP_003554674.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 524
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/406 (64%), Positives = 318/406 (78%), Gaps = 5/406 (1%)
Query: 1 MGVVNITKNTTMICAPLMAQ---SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLE 57
MG K++ M+CAP+ Q SVEQ+ ++MYQAKAE AD+VE+RLDCI NF P +L+
Sbjct: 1 MGSNQDWKHSVMVCAPITTQQSVSVEQIANDMYQAKAEDADIVEVRLDCITNFHPXHELK 60
Query: 58 IILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGK 115
IL KPLPVLIV +PKW GGLYEGDE+ +LEAL LA +LGAD+++ +LK AS + L +
Sbjct: 61 TILQNKPLPVLIVNQPKWEGGLYEGDENMQLEALQLAVELGADFIEVQLKAASCLPTLVE 120
Query: 116 QYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQL 175
+H S + IVSC +D P +E+L LV MQ T ADIIKLV DITEI +IF L
Sbjct: 121 HKRNHNSHGKIIVSCYVDGIIPPQEELLQLVELMQGTEADIIKLVTHAADITEIIKIFSL 180
Query: 176 LSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235
+CQVP+IAYSVGERGL+SQLLS KF G VY SL G P+ GLP+++++++ YK+EH+
Sbjct: 181 FPYCQVPLIAYSVGERGLISQLLSQKFGGFFVYESLAGNPIPGLPSLDNIQEAYKLEHVK 240
Query: 236 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSV 295
ADTKVFGLISKP+ HSKGPILHNP FRH+NYNGIYVPMFVDDLK+FF+TY PDF+GF V
Sbjct: 241 ADTKVFGLISKPISHSKGPILHNPPFRHINYNGIYVPMFVDDLKEFFNTYPCPDFSGFIV 300
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
G PYKE +++FCDEVHPLAQ+I AVNTIIRR GKL+GYNT CEA+ITAIEDA+ E G
Sbjct: 301 GIPYKEEILRFCDEVHPLAQSIGAVNTIIRRARHGKLVGYNTHCEAAITAIEDALIEHGC 360
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
+G AS GSPLAGR+FVL GAGGAG ALAFG+KSRGA +VIFDI+F
Sbjct: 361 NDGGASLGSPLAGRLFVLVGAGGAGIALAFGSKSRGALLVIFDINF 406
>gi|255559348|ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223540079|gb|EEF41656.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 515
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/395 (57%), Positives = 299/395 (75%), Gaps = 2/395 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N ++C PL ++ ++LS M +A+ EGAD+VE+R+D ++ F +E ++ + LP
Sbjct: 4 QNNLLVCTPLECETAGEMLSCMEKARGEGADLVELRVDSMS-FSHISQVEKLIKLRTLPA 62
Query: 68 LIVYRPKWAGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
++ +RPK + GD K L+ L LA DL ++V+ E +VAS++ +Y ++S +
Sbjct: 63 IVSFRPKTSKISSNGDSKKTCLQVLSLALDLDVEFVEMEYEVASDVSMAEYIYNRSSGKL 122
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
IVS ++ PS E LG L++ +Q+TGAD+IKLV +V+ IT++A +F++L+HCQVP+IA
Sbjct: 123 IVSSYVNGGKPSAEKLGNLIANLQSTGADVIKLVINVDYITDLAPVFKMLAHCQVPLIAL 182
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK 246
+VG RGL+SQLL PKF G LVYGSL+ V G+PT+ SLR YK+E+IN+DTKVFGLIS
Sbjct: 183 AVGSRGLISQLLGPKFGGFLVYGSLRDKAVPGMPTLFSLRHVYKLEYINSDTKVFGLISN 242
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
PVGHSKGPILHNP FRH YNGIYVPM VDD+K+FF TY+S DFAGFSVG P+KEA +
Sbjct: 243 PVGHSKGPILHNPAFRHTGYNGIYVPMQVDDIKEFFRTYTSTDFAGFSVGIPHKEAAVSC 302
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
CDEVHPLA++I AVNTI+RRP+DGKL+GYNTDCEASITAIEDA++ER N A SPL
Sbjct: 303 CDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCEASITAIEDALRERRPTNRGALDTSPL 362
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
AG+ FVL GAGGAGRALAFGA SRGARVV+F+ +F
Sbjct: 363 AGKTFVLIGAGGAGRALAFGASSRGARVVVFNRNF 397
>gi|116787099|gb|ABK24375.1| unknown [Picea sitchensis]
Length = 514
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/401 (55%), Positives = 289/401 (72%), Gaps = 10/401 (2%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ +N ++C+PLMA++VE++LS M AK GAD +EIRLDC+N + DLE +L + L
Sbjct: 1 MAQNGFLVCSPLMAETVEEMLSQMQHAKDVGADCIEIRLDCLNGYAT-TDLEQLLKARVL 59
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P ++ YR K GG YE DE KRL+ L LA +LGAD++D EL+VA + + + S +
Sbjct: 60 PTIVTYRLKSEGGKYEVDEKKRLDTLRLAHELGADFIDVELQVAFDFVSRIKDKKSSNCK 119
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS ++ TPS EDL +LV MQ+TGADI+K+V + +IT+++R+FQL+ HCQVPIIA
Sbjct: 120 IIVSNHISGRTPSTEDLSHLVVNMQSTGADILKIVTTATNITDVSRVFQLIPHCQVPIIA 179
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVF 241
G+RGL+SQLL PKF G L+YGS+ TP G P + L YK+ +N+DTKVF
Sbjct: 180 CVTGDRGLISQLLGPKFGGYLIYGSIGSGKDSTP--GQPKLADLTGHYKIGRLNSDTKVF 237
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
G+I+ PVGHSKGPILHN FR +NG+YVP+ VD+L F YS+PDFAGFSVG P+KE
Sbjct: 238 GVIANPVGHSKGPILHNQAFRDAGFNGVYVPLLVDNLADFLKVYSAPDFAGFSVGIPHKE 297
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTA 360
A + CDEV PLAQ+I AVNTI+RR SDGKLIGYNTDCE +I+AIED +K E G N +
Sbjct: 298 AAVTCCDEVQPLAQSIGAVNTIVRRQSDGKLIGYNTDCEGAISAIEDGLKGETGSINSGS 357
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
S SPLAGR FVL GAGGAGRALAFGAK RGA V+I + ++
Sbjct: 358 S--SPLAGRTFVLVGAGGAGRALAFGAKQRGAHVIIANRNY 396
>gi|224128592|ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222861143|gb|EEE98685.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 504
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/395 (54%), Positives = 292/395 (73%), Gaps = 13/395 (3%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
KN ++C PL ++ ++LS+M +A+ EGAD+ E+RLD ++ F ++E ++ ++ LP
Sbjct: 4 KNNLLVCTPLECETAGEMLSSMKRAETEGADLTELRLDSLS-FSHNSEVEKLIKQRTLPS 62
Query: 68 LIVYRPKWAGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
++ +R + + D L+ L LA DL ++V+ + +VAS +Y ++S T+
Sbjct: 63 IVSFRLEPSRISSNKDRKNTCLQVLRLAFDLNVEFVEMDYEVASEDDMAEYVYNRSNTKL 122
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
IVS ++ PS E+LGYL++ MQ+TGAD++KLV V IT++A +F +L+HCQ+P+IA
Sbjct: 123 IVSSYVNGRKPSAEELGYLIACMQSTGADVLKLVLDVEKITDLAPVFTMLTHCQIPLIAL 182
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK 246
+VG RGL+SQLL PKF G LVYGSL V G+PT+ SLRQ YK+E+INADTKVFGLIS
Sbjct: 183 AVGSRGLISQLLGPKFGGFLVYGSLSDKAVPGMPTLLSLRQIYKLEYINADTKVFGLISN 242
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
PVGHSKGP+LHNP FRH YNGIYVPM VDD+K+FF TY+S DFAGFSVG P+KEA +
Sbjct: 243 PVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEAAVGC 302
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
CDEVHPLA++I AVNTI+RRP+DGKL+GYNTDC+ASI+AIEDA+ SPL
Sbjct: 303 CDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDALT-----------ASPL 351
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
+G+ FVL GAGGAGRALAFGAKSRGARV+IF+ ++
Sbjct: 352 SGKTFVLIGAGGAGRALAFGAKSRGARVIIFNRNY 386
>gi|225451146|ref|XP_002270188.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic [Vitis vinifera]
gi|298204990|emb|CBI34297.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/403 (50%), Positives = 277/403 (68%), Gaps = 8/403 (1%)
Query: 3 VVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK 62
V + N T++C PLM +VEQ+L+ M +AK GAD+VEIRLDC+ NF P +DL+I++ +
Sbjct: 15 VSGVRSNPTLLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQ 74
Query: 63 KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS 122
PLP L+ YRP W GG YEGDE+KR +AL LA +LGA Y+D EL+VA Y
Sbjct: 75 SPLPTLVTYRPIWEGGQYEGDENKRQDALRLAMELGASYIDVELEVAHEFNNSIYGKKPQ 134
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP 182
+ IVS + TPS E +G LV+R+QA+GADI+K+ + DIT++AR+ Q+ H QVP
Sbjct: 135 NFKVIVSSHNFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVP 194
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKV 240
IA +GERGL+S+LLSPKF G L YG+L+ + G PT + L Y I DTKV
Sbjct: 195 TIAIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKV 254
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF-AGFSVGFPY 299
+G+I KPVGHSK P+L N F+ V N +YV + VDD++KFF+TYS+PDF +G S P+
Sbjct: 255 YGIIGKPVGHSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPH 314
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KE +K D + P+A+ I A+N I+R+P DGKL +NTD +I AIED ++E NG+
Sbjct: 315 KEVAIKCMDTIDPIARKIGAINNIVRKP-DGKLTAFNTDYIGAIEAIEDGLRE---SNGS 370
Query: 360 A-SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
+ + GSPLAG++FV+ GAGGAG++LA+GAK +GARVV+ + F
Sbjct: 371 SPAVGSPLAGKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTF 413
>gi|148906893|gb|ABR16592.1| unknown [Picea sitchensis]
gi|148907829|gb|ABR17039.1| unknown [Picea sitchensis]
Length = 518
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/396 (52%), Positives = 285/396 (71%), Gaps = 3/396 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N ++C PL+ QS+E++LS M A+ GAD VE+R+D + NF P DL+ +L + +P
Sbjct: 6 QNDCLLCIPLVGQSMEEMLSQMELARIHGADCVELRIDHVRNFNPRVDLDTLLKARTMPA 65
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
++ YRPKW GG YEGDE KRL+ L LA +LGADY+D EL+VAS+ + + + ++ I
Sbjct: 66 IVTYRPKWEGGAYEGDEGKRLDVLRLAMELGADYIDVELQVASDFIKSISNKKRENSKII 125
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS EDLG LV+R+Q+TGADI+K+ + DIT++ARIF++L++CQVPI+A
Sbjct: 126 VSNHNYQFTPSLEDLGLLVARIQSTGADIVKIATTATDITDVARIFRVLAYCQVPILALV 185
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S+LL PKF G L +GSL+ G T+ + YK+ + DTKVFGLI
Sbjct: 186 MSERGLISRLLCPKFGGYLTFGSLEAGKESAPGQATLADMLNIYKIRGLGRDTKVFGLIG 245
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
PV HSKGP LHN F + ++ IYVP VDD+K+F YSSPDFAGFSV P+KEA ++
Sbjct: 246 NPVSHSKGPTLHNRAFGEIGFDAIYVPFLVDDIKEFLKVYSSPDFAGFSVTIPHKEAALE 305
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDEV P+A++I AVNTI+RR SDGKLIGYNTD +I+AIEDA+K + + G + SP
Sbjct: 306 CCDEVDPIARSIGAVNTIVRRQSDGKLIGYNTDSVGAISAIEDALKGK-HNYGDWTHSSP 364
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
LAG++F++ GAGGAG+ALAFGAK +GARVVI + ++
Sbjct: 365 LAGKLFLIVGAGGAGKALAFGAKQKGARVVIANRNY 400
>gi|58047529|gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans
regia]
Length = 508
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/388 (53%), Positives = 277/388 (71%), Gaps = 4/388 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++CAP+MA+SV++++ NM +AK AD+VEIRLD + +F P DL+ I+ PLP L
Sbjct: 1 TLVCAPIMAESVDKMVINMNKAKQGDADLVEIRLDSLKSFNPSNDLKTIIKASPLPTLFT 60
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRPKW GG Y+GDE KRL+AL LA + GADY+D EL+VA Y ++ IVS
Sbjct: 61 YRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVACEFNDSIYGRKPENSKVIVSS 120
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TPS EDLG LV+R+QATGADI+K+ + +I ++ARIFQ+ H QVPII +GE
Sbjct: 121 HNYQDTPSAEDLGNLVARIQATGADIVKIATTALEIADVARIFQITVHSQVPIIGIVMGE 180
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RG +S++L PKF G L +G+++ V G PT++ L Y + I DTKVFG+I KPV
Sbjct: 181 RGFMSRILCPKFGGFLTFGTIESGIVSAPGQPTMKDLLHLYNLRRIGPDTKVFGIIGKPV 240
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
HSK PIL+N F+ V +NG+Y+P+ VDD+ F TYSS DFAGFS P+KEA +K CD
Sbjct: 241 HHSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTYSSTDFAGFSCTIPHKEAALKCCD 300
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
EV P+A++I AVN IIRRP+DGKL+GYNTD +I+AIED + RG N + + SPLAG
Sbjct: 301 EVDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGL--RGSHNSSNTADSPLAG 358
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVI 396
++FV+ GAGGAG+ALA+GAK +GARVVI
Sbjct: 359 KLFVVIGAGGAGKALAYGAKEKGARVVI 386
>gi|302795227|ref|XP_002979377.1| hypothetical protein SELMODRAFT_233322 [Selaginella moellendorffii]
gi|300153145|gb|EFJ19785.1| hypothetical protein SELMODRAFT_233322 [Selaginella moellendorffii]
Length = 498
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/393 (54%), Positives = 284/393 (72%), Gaps = 9/393 (2%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
M+CAPL+A+SVE++L + AKA GADVVE+R+D IN+FQPG DL ++ + LPV+I Y
Sbjct: 1 MLCAPLVAESVEEMLHQIKAAKASGADVVELRVDYINSFQPGVDLPRLIEGRVLPVIITY 60
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG-TRFIVSC 130
RP W GGLYEGDE R+ AL LA +L AD++D EL+VA + + Q S S TR IVS
Sbjct: 61 RPNWEGGLYEGDEAARVAALSLAIELQADFIDVELQVAEDFIASQSSKRSSSSTRIIVSN 120
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E++G LV+RMQATGADIIK V + N++ + A +F++L+H QVP IA +G+
Sbjct: 121 HNYHTTPSSEEIGRLVARMQATGADIIKFVTTANNVVDSANVFRVLAHTQVPTIALVMGQ 180
Query: 191 RGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S+LLSPKF G L +G+L G PT+ L +TY++ ++ DT+V+G+I PV
Sbjct: 181 KGLISRLLSPKFGGFLTFGTLSSGKESAPGQPTLTDLVRTYRLREMDCDTRVYGIIGNPV 240
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
GHSKGP LHNP F + YN +Y+P VD+L +F S YS+PDF GFSV P+KE +K CD
Sbjct: 241 GHSKGPYLHNPAFEAIGYNAVYLPFLVDNLAEFLSVYSAPDFGGFSVTIPFKEDALKCCD 300
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
EV A+AI AVNTIIRR +DGK +GYNTDCEA+I+AIED ++E GY PL+G
Sbjct: 301 EVESSAKAIGAVNTIIRR-ADGKFVGYNTDCEAAISAIEDGVRESGYHG-----SQPLSG 354
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
++ V+ GAGGAG+ALAFGAK RGARVVI + +F
Sbjct: 355 KLCVVIGAGGAGKALAFGAKHRGARVVIANRNF 387
>gi|359477446|ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Vitis vinifera]
Length = 522
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/396 (53%), Positives = 282/396 (71%), Gaps = 7/396 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
++KN+T+IC P+M +++E+++ +M +AK GAD+VE+RLD + F P +DLE+++ K PL
Sbjct: 6 MSKNSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPL 65
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRPKW GG YEGDE+ R +AL LA +LGADYVD ELKVA + + +
Sbjct: 66 PTLFTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFK 125
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VP 182
IVS + TPS EDLG LV +QATGADI+K+ + +IT++ARIFQ+ H Q VP
Sbjct: 126 VIVSSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVSSVP 185
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKV 240
+I +GERGL+S++L PKF+G L +GSL+ V G PT++ L Y + DTKV
Sbjct: 186 VIGLVMGERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKV 245
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FG+I KPV HSK P L+N F+ V +NG+YV + VDD+ KFF TYS+ DFAGFS P+K
Sbjct: 246 FGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTIPHK 305
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EA +K CDEV P+A++I AVN IIRRPSDGKL GYNTD +I+AIED +++ + T+
Sbjct: 306 EAALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTS 365
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
GSPLAG++FV+ GAGGAG+ALA+GAK +GARVVI
Sbjct: 366 --GSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVI 399
>gi|356495945|ref|XP_003516831.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 527
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/395 (53%), Positives = 286/395 (72%), Gaps = 12/395 (3%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
KN T+IC P+M +SVE++ ++ +AKA GAD+VEIRLD + F P +DL + + LP+
Sbjct: 17 KNATLICVPIMGESVEKMEIDVDKAKAGGADLVEIRLDSLKTFDPYRDLNAFIQHRSLPL 76
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSG 123
L YRPKW GG+Y+GDE+KRL+AL LA +LGADY+D EL+VA +I GK ++
Sbjct: 77 LFTYRPKWEGGMYDGDENKRLDALRLAMELGADYIDIELQVAHEFYDSIRGKTFNK---- 132
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPI 183
T+ IVS + TPS EDLG LV+R+QATGADI+K+ + DIT++AR+FQ++ H QVP
Sbjct: 133 TKVIVSSHNYQLTPSIEDLGNLVARIQATGADIVKIATTALDITDVARMFQIMVHSQVPF 192
Query: 184 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVF 241
I +G+RGL+S++LS KF G L +G+L+ V G PT++ L Y + + DTKVF
Sbjct: 193 IGLVMGDRGLISRILSAKFGGYLTFGTLESGVVSAPGQPTLKDLLYLYNLRQLAPDTKVF 252
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
G+I KPVGHSK PIL N F+ + NG+Y+ + VDDL F TYSS DF GFSV P+KE
Sbjct: 253 GIIGKPVGHSKSPILFNEVFKSIGLNGVYLFLLVDDLANFLRTYSSTDFVGFSVTIPHKE 312
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
+K CDEV P+A++I AVN I+RRP+DGKLIGYNTD +ITAIE+ + RG NG+++
Sbjct: 313 TALKCCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTDYVGAITAIENGL--RGKHNGSST 370
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
SPLAG++FV+ GAGGAG+ALA+GAK++GARVVI
Sbjct: 371 TISPLAGKLFVVIGAGGAGKALAYGAKAKGARVVI 405
>gi|147837950|emb|CAN60561.1| hypothetical protein VITISV_034024 [Vitis vinifera]
Length = 531
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/396 (51%), Positives = 277/396 (69%), Gaps = 5/396 (1%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+IC P+MA SV+Q+L + +AK G D+VEIRLD + NF P +DL+ ++ + PLP
Sbjct: 21 RNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQSPLPT 80
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L+ YRP W GG Y+GDE KRL+AL LA +LGADY+D EL+VA + + I
Sbjct: 81 LVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFINSIQGKTSGKVKII 140
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS E+LG LV+R+QATGADI+K+ + DIT+ ARIFQ+L+H QVP I +
Sbjct: 141 VSSHNYQNTPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHSQVPTIGIA 200
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S++LS KF L +GSL+ V G PTV+ L Y I DTKV G+I
Sbjct: 201 MAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPDTKVHGVIG 260
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KP+GHSK P L+N F+ V +NGIY+P+ VD +K F +TYSSPDF G+S P+KE ++
Sbjct: 261 KPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTIPHKEDGLR 320
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDE+ P+AQAI A++ +IRRP+DGKL+GYN D +I AIE+ ++ NGT S GSP
Sbjct: 321 CCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA---SNGTTSVGSP 377
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
LAG++FV+ GAGGAG+ALA+G K +GARVV+ + F
Sbjct: 378 LAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTF 413
>gi|302817344|ref|XP_002990348.1| hypothetical protein SELMODRAFT_269650 [Selaginella moellendorffii]
gi|300141910|gb|EFJ08617.1| hypothetical protein SELMODRAFT_269650 [Selaginella moellendorffii]
Length = 536
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/401 (53%), Positives = 286/401 (71%), Gaps = 13/401 (3%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N TM+CAPL+A+SVE++L + AKA GADVVE+R+D IN+FQP DL ++ + LPV
Sbjct: 23 QNGTMLCAPLVAESVEEMLHQIKAAKASGADVVELRVDYINSFQPRVDLPRLIEGRVLPV 82
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG-TRF 126
+I YRP W GGLYEGDE R+ AL LA +L AD++D EL+VA + + Q S S TR
Sbjct: 83 IITYRPNWEGGLYEGDEAARVAALSLAIELQADFIDVELQVAEDFIASQSSKRSSSSTRI 142
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VP 182
IVS + TPS E++G LV+RMQATGADIIK V + N++ + A +F++L+H Q VP
Sbjct: 143 IVSNHNYHTTPSSEEIGRLVARMQATGADIIKFVTTANNVVDSANVFRVLAHTQLSLKVP 202
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKV 240
IA +G++GL+S+LLSPKF G L +G+L G PT+ L +TY++ ++ DT+V
Sbjct: 203 TIALVMGQKGLISRLLSPKFGGFLTFGTLSSGKESAPGQPTLTDLVRTYRLREMDCDTRV 262
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
+G+I PVGHSKGP LHNP F + YN +Y+P VD+L +F S YS+PDF GFSV P+K
Sbjct: 263 YGIIGNPVGHSKGPYLHNPAFEAIGYNAVYLPFLVDNLAEFLSVYSAPDFGGFSVTIPFK 322
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E +K CDEV A+AI AVNTIIRR +DGK +GYNTDCEA+I+AIED ++E GY
Sbjct: 323 EDALKCCDEVESSAKAIGAVNTIIRR-ADGKFVGYNTDCEAAISAIEDGVRESGYHG--- 378
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
PL+G++ V+ GAGGAG+ALAFGAK RGARVVI + +F
Sbjct: 379 --SQPLSGKLCVVIGAGGAGKALAFGAKHRGARVVIANRNF 417
>gi|225451148|ref|XP_002270232.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Vitis vinifera]
Length = 531
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/396 (51%), Positives = 277/396 (69%), Gaps = 5/396 (1%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+IC P+MA SV+Q+L + +AK G D+VEIRLD + NF P +DL+ ++ + PLP
Sbjct: 21 RNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQSPLPT 80
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L+ YRP W GG Y+GDE KRL+AL LA +LGADY+D EL+VA + + I
Sbjct: 81 LVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFINSIQGKTSGNVKII 140
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + +PS E+LG LV+R+QATGADI+K+ + DIT+ ARIFQ+L+H QVP I +
Sbjct: 141 VSSHNYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHSQVPTIGIA 200
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S++LS KF L +GSL+ V G PTV+ L Y I DTKV G+I
Sbjct: 201 MAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPDTKVHGVIG 260
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KP+GHSK P L+N F+ V +NGIY+P+ VD +K F +TYSSPDF G+S P+KE ++
Sbjct: 261 KPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTIPHKEDGLR 320
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDE+ P+AQAI A++ +IRRP+DGKL+GYN D +I AIE+ ++ NGT S GSP
Sbjct: 321 CCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA---SNGTTSVGSP 377
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
LAG++FV+ GAGGAG+ALA+G K +GARVV+ + F
Sbjct: 378 LAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTF 413
>gi|255542472|ref|XP_002512299.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548260|gb|EEF49751.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 524
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/401 (50%), Positives = 266/401 (66%), Gaps = 8/401 (1%)
Query: 5 NITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP 64
++ + T++C PLM +V+Q+L M +A ADVVEIRLDC+ N P +DLEI++ + P
Sbjct: 10 SVQSSPTLLCTPLMGTTVDQMLLEMRKATEISADVVEIRLDCLRNLNPRQDLEILIKQSP 69
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
LP L+ YRP W GG YEGDE KR +AL A LGA+YVD EL+VA Y
Sbjct: 70 LPTLVTYRPIWEGGQYEGDETKRQDALRFAMQLGANYVDVELEVAHEFNNSIYGKKPDNF 129
Query: 125 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPII 184
+ IVS + TPS E + LV+R+QATGADI+K+ + DIT+ ARIFQ++ HCQVP+I
Sbjct: 130 KVIVSSHNFHNTPSSEAIANLVARIQATGADIVKIATTALDITDCARIFQIMVHCQVPVI 189
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFG 242
+GERGL+S+LLSPKF G L YG+L+ + G PT + L Y I DTKV+G
Sbjct: 190 GIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIRPDTKVYG 249
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-GFSVGFPYKE 301
+I KPVGHSK P+L N F+ V N +YV VDD++KFFSTYSS DFA G S P+KE
Sbjct: 250 IIGKPVGHSKSPLLFNAAFKSVGLNAVYVHFLVDDVEKFFSTYSSVDFASGCSCTIPHKE 309
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
+K DE+ P+A+ I A+N IIRRP D L+ YNTD +I AIED ++E NG
Sbjct: 310 VALKCMDEIDPIAKKIGAINNIIRRP-DATLMAYNTDYIGAIDAIEDGLREL---NGAVP 365
Query: 362 FG-SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
G SPLAG++FV+ GAGGAG++LA+GA +GARVV+ + F
Sbjct: 366 AGTSPLAGKLFVVLGAGGAGKSLAYGAAQKGARVVVANRTF 406
>gi|298204991|emb|CBI34298.3| unnamed protein product [Vitis vinifera]
Length = 600
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/396 (51%), Positives = 277/396 (69%), Gaps = 5/396 (1%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+IC P+MA SV+Q+L + +AK G D+VEIRLD + NF P +DL+ ++ + PLP
Sbjct: 90 RNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQSPLPT 149
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L+ YRP W GG Y+GDE KRL+AL LA +LGADY+D EL+VA + + I
Sbjct: 150 LVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFINSIQGKTSGNVKII 209
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + +PS E+LG LV+R+QATGADI+K+ + DIT+ ARIFQ+L+H QVP I +
Sbjct: 210 VSSHNYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHSQVPTIGIA 269
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S++LS KF L +GSL+ V G PTV+ L Y I DTKV G+I
Sbjct: 270 MAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPDTKVHGVIG 329
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KP+GHSK P L+N F+ V +NGIY+P+ VD +K F +TYSSPDF G+S P+KE ++
Sbjct: 330 KPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTIPHKEDGLR 389
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDE+ P+AQAI A++ +IRRP+DGKL+GYN D +I AIE+ ++ NGT S GSP
Sbjct: 390 CCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA---SNGTTSVGSP 446
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
LAG++FV+ GAGGAG+ALA+G K +GARVV+ + F
Sbjct: 447 LAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTF 482
>gi|224107417|ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222863514|gb|EEF00645.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 538
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/398 (51%), Positives = 272/398 (68%), Gaps = 4/398 (1%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
MG + +N T+IC P+MA SV+++ M +AK+ GAD+VEIRLD + +F P D++ ++
Sbjct: 21 MGSGGVRRNPTLICTPIMADSVDKMAILMAEAKSVGADLVEIRLDSLKDFNPNSDIKTLI 80
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
PLP L YRP W GG Y GDE RL+AL LA +LGADY+D ELKVA +
Sbjct: 81 LHSPLPTLFTYRPMWEGGQYNGDEKPRLDALRLAMELGADYIDVELKVAHEFNELLRGNK 140
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
+ IVS + TPS E+LG LV+R+QA GADI+K+ + DI+++ARIFQ+ H Q
Sbjct: 141 PGKCKLIVSSHNYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVARIFQITVHSQ 200
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT 238
VPII +GERGL+S++L KF G L +G+L+ V G PT++ L Y I DT
Sbjct: 201 VPIIGLVMGERGLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLYNFRLIGPDT 260
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KVFG+I KPVGHSK P+L N F+ V NG+YV + VDD+ +F TYSS DFAGFS P
Sbjct: 261 KVFGIIGKPVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTYSSTDFAGFSCTIP 320
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE K CDEVHP+A++I AVN IIRR +DGKL GYNTD +I+AIE+ + R +N
Sbjct: 321 HKEDAAKCCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGL--RASQNV 378
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
+ + GSPLAG++FV+ GAGGAG+ALA+GAK +GARVVI
Sbjct: 379 SNTVGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVI 416
>gi|255551621|ref|XP_002516856.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223543944|gb|EEF45470.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 539
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/397 (51%), Positives = 275/397 (69%), Gaps = 4/397 (1%)
Query: 2 GVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILT 61
GV + KN T+ICAP+MA SV+++L N+ +AK GAD+VEIRLD + F D++ ++T
Sbjct: 23 GVGGLRKNPTLICAPIMADSVDKMLINLVKAKENGADLVEIRLDSLKTFNASDDIKTLIT 82
Query: 62 KKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQ 121
+ PLP L YRPKW GG Y+GDE++RL+AL LA +LGADY+D ELKVA +
Sbjct: 83 RSPLPTLFTYRPKWEGGEYDGDENERLDALRLAMELGADYIDVELKVAHKFNDSIRGNKP 142
Query: 122 SGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV 181
+ + IVS + TPS EDLG LV+ +QA GADI+K+ + DIT++ARIFQ+ H QV
Sbjct: 143 AKCKVIVSSHNYHNTPSVEDLGNLVADIQAAGADIVKIATTALDITDVARIFQITVHSQV 202
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTK 239
PII +GERGL+S++L KF G L +G+L+ V G P ++ L Y I DTK
Sbjct: 203 PIIGIVMGERGLISRILCAKFGGYLTFGTLESGIVSAPGQPMIKDLLDLYNFRQIGPDTK 262
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
V+G+I KPVGHSK P+L+N F+ V +NG+YV + VDD+ F T+SS DFAGFS P+
Sbjct: 263 VYGIIGKPVGHSKSPVLYNEAFKSVGFNGVYVHLLVDDIASFLQTFSSTDFAGFSCTIPH 322
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA + CD + +A++I AVN IIRR DGKL GYNTD + +ITAIE+ + R +N +
Sbjct: 323 KEAAVDCCDGIDSVARSIGAVNCIIRRQRDGKLFGYNTDYDGAITAIEEGL--RVSQNIS 380
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
+ SPLAG++FV+ GAGGAG+ALA+GAK +GA+VVI
Sbjct: 381 GAADSPLAGKLFVVIGAGGAGKALAYGAKQKGAKVVI 417
>gi|397911046|gb|AFO68799.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
Length = 490
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/392 (51%), Positives = 273/392 (69%), Gaps = 15/392 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
+ICAP+M +SV+ +L M +AK GAD+VE+RLD I NF P KDL+ ++ + PLP LI Y
Sbjct: 1 LICAPVMGESVDDMLMEMRKAKEYGADLVEVRLDYIKNFSPRKDLDTLIRECPLPTLITY 60
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RPKW GGLYEGDE+KRL+AL +A +LG DY+D EL+VA + ++ + IVS +
Sbjct: 61 RPKWEGGLYEGDENKRLDALRVAMELGVDYIDIELQVAHEFIHSVHAKKPEKFKIIVSSH 120
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TPS ED+G LV+R+QATGADI+K+ + +IT++AR+FQ++ H QVPII +GER
Sbjct: 121 NYQSTPSVEDIGDLVARIQATGADIVKIATTALEITDVARMFQIIVHSQVPIIGLVMGER 180
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
GL+S+LL PKF G L +G+++ + G PT++ L Y I DTKVFG+I KPV
Sbjct: 181 GLMSRLLCPKFGGYLTFGAIEAGKLSAPGQPTIKDLLDKYNFRQIGPDTKVFGVIGKPVS 240
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
SK P+L+N F+ + YNG+YV VDD+ KF TY SPDFAGFS P+KEA +++ DE
Sbjct: 241 QSKSPLLYNNAFKSIGYNGVYVQFLVDDIAKFLKTYPSPDFAGFSCTMPHKEAALEYLDE 300
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ P+A+ I AVN I+RR SDGKL GYNTD +I+AIED ++ S LAG+
Sbjct: 301 IDPIAKLIGAVNCIVRR-SDGKLSGYNTDYFGAISAIEDGLR------------SLLAGK 347
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
+FV+ GAGGAG+ALAFGAK +GARVVI + F
Sbjct: 348 LFVVIGAGGAGKALAFGAKEKGARVVIANRTF 379
>gi|297736925|emb|CBI26126.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/371 (54%), Positives = 263/371 (70%), Gaps = 4/371 (1%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87
+M +AK GAD+VE+RLD + F P +DLE+++ K PLP L YRPKW GG YEGDE+ R
Sbjct: 4 DMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLPTLFTYRPKWEGGQYEGDENSR 63
Query: 88 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 147
+AL LA +LGADYVD ELKVA + + + IVS + TPS EDLG LV
Sbjct: 64 RDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGNLVV 123
Query: 148 RMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALV 207
+QATGADI+K+ + +IT++ARIFQ+ H QVP+I +GERGL+S++L PKF+G L
Sbjct: 124 SIQATGADIVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSGYLT 183
Query: 208 YGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+GSL+ V G PT++ L Y + DTKVFG+I KPV HSK P L+N F+ V
Sbjct: 184 FGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVG 243
Query: 266 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 325
+NG+YV + VDD+ KFF TYS+ DFAGFS P+KEA +K CDEV P+A++I AVN IIR
Sbjct: 244 FNGVYVHLLVDDIAKFFHTYSAADFAGFSCTIPHKEAALKCCDEVSPVAKSIGAVNCIIR 303
Query: 326 RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
RPSDGKL GYNTD +I+AIED +++ + T+ GSPLAG++FV+ GAGGAG+ALA+
Sbjct: 304 RPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTS--GSPLAGKLFVVIGAGGAGKALAY 361
Query: 386 GAKSRGARVVI 396
GAK +GARVVI
Sbjct: 362 GAKEKGARVVI 372
>gi|449448440|ref|XP_004141974.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 529
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/398 (48%), Positives = 272/398 (68%), Gaps = 4/398 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
I++N+T+IC P+M++S+++++ ++ +A GAD+VEIRLD + F P +DL++++ + PL
Sbjct: 17 ISRNSTLICVPIMSESIDKMIVDVKKAGENGADIVEIRLDALKIFNPHEDLKLLIKESPL 76
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRP W GG Y+GDE++RL+ L LA LGADY+D EL+VA + + +
Sbjct: 77 PTLFTYRPNWEGGQYDGDENQRLDVLRLAMKLGADYIDVELQVAREFIDSIQQEKPNNFK 136
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + +TPS EDLG LV+ +QATGADI+K+ + DIT++AR+FQ+L + QVPII
Sbjct: 137 VIVSNHNYKKTPSLEDLGSLVAEIQATGADIVKIATTALDITDVARMFQVLVYSQVPIIG 196
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+ +RG + +LL PK+ G L +G+L+ V G PT++ L Y HI DTKVFG+
Sbjct: 197 LVMKDRGFICRLLCPKYGGYLTFGTLEEGIVSAPGQPTIKDLLNLYNFRHIGPDTKVFGI 256
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I PVG SK P L+N F+ V + IYVP+ VDD KF TYSS D GFSV P+KEAV
Sbjct: 257 IGNPVGDSKLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAV 316
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
K+CDEV +A+A AVN ++RR SDGKL GYNTDC +I+AIED + G N + +
Sbjct: 317 FKYCDEVDSVAKATGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGL--LGLHNDSFAVS 374
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
S LAG++ V+ GAGG G+A+A+GAK +GAR+VI + F
Sbjct: 375 SRLAGKLVVVIGAGGVGKAVAYGAKQKGARIVIANRSF 412
>gi|388521847|gb|AFK48985.1| unknown [Medicago truncatula]
Length = 515
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/398 (50%), Positives = 282/398 (70%), Gaps = 16/398 (4%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLPV 67
N T+IC P+M ++++++++++ +AK GAD+VEIRLD + F P +DL + + LP
Sbjct: 2 NATLICVPIMGETIQKMIADIQKAKLNGADLVEIRLDSLKTFNPSQDLNTFMQQHHSLPF 61
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSG 123
L YRPKW GG+YEGDE++RL+AL LA +L ADY+D ELKVA +I GK Y+
Sbjct: 62 LFTYRPKWEGGMYEGDENQRLDALRLAMELEADYIDIELKVAHQFYDSIRGKTYNK---- 117
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-- 181
T+ IVS + +TPS EDLG LV+R+QATGADI+K+ + +IT++AR+F+++ H QV
Sbjct: 118 TKVIVSSHNYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFEIMVHSQVRH 177
Query: 182 -PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT 238
P I +G+RGL+S++L KF G L +G+L+ V G PT++ L Y I DT
Sbjct: 178 VPFIGLVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPDT 237
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KV+G++ KPV HSK PIL N F+ + ++G++V + VDDL F TYSS DF GFSV P
Sbjct: 238 KVYGIVGKPVSHSKSPILFNEAFKTIGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIP 297
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KEA +K CDEV P+A++I AVN ++RRP+DGKLIGYNTD +I+AIED ++ + +G
Sbjct: 298 HKEAALKCCDEVDPVAKSIGAVNCVVRRPTDGKLIGYNTDYVGAISAIEDGLRGKHIDSG 357
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
TA SPLAG++FV+ GAGGAG+ALA+GAK +GAR+VI
Sbjct: 358 TAV--SPLAGKLFVVIGAGGAGKALAYGAKEKGARIVI 393
>gi|297833382|ref|XP_002884573.1| EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata]
gi|297330413|gb|EFH60832.1| EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata]
Length = 603
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/398 (51%), Positives = 273/398 (68%), Gaps = 2/398 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
+G +I KN ++ICAP+MA S+++++ ++A GAD+VEIRLD + +F P +DL+ I+
Sbjct: 84 IGSQDIVKNPSLICAPVMADSIDKMVIETFKAHELGADLVEIRLDWLKDFNPIEDLKTII 143
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
K PLP L YRPKW GG YEGDE++R + L LA +LGADYVD EL+VAS+ +
Sbjct: 144 KKSPLPTLFTYRPKWEGGQYEGDENERQDVLRLAMELGADYVDVELQVASDFIKSIDGKK 203
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
R IVS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S Q
Sbjct: 204 PESFRVIVSSHNYQNTPSVEDLNDLVARIQQTGADIVKIATTAVDIADVARMFHITSSAQ 263
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT 238
P I +GERGL+S++L KF G L +G+L + V G PT++ L Y I DT
Sbjct: 264 GPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDT 323
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KV+G+I KPV HSK PI+HN F+ V++ G+YV + VD+L F YSS DFAGFS P
Sbjct: 324 KVYGIIGKPVSHSKSPIVHNQAFKSVDFKGVYVHLLVDNLASFLQAYSSSDFAGFSCTIP 383
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KEA ++ CDEV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G +
Sbjct: 384 HKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRRSGDPSS 443
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
S SPLAG+ V+ GAGGAG+ALA+GAK +GA+VVI
Sbjct: 444 GPSSSSPLAGKTVVVIGAGGAGKALAYGAKEKGAKVVI 481
>gi|397911050|gb|AFO68801.1| shikimate dehydrogenase, partial [Gunnera manicata]
Length = 377
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/386 (51%), Positives = 268/386 (69%), Gaps = 14/386 (3%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
IC PL A+SV+++L M +AK G D+VE+RLD + +F P +DLE ++ + PLP + +R
Sbjct: 2 ICVPLTAESVDEMLIGMRKAKESGVDLVEVRLDFLKSFNPPQDLEFLIKECPLPTIFTFR 61
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
PKW GG Y+G+E+KRL+AL LA +LGADY+D EL+VA + + IVS +
Sbjct: 62 PKWEGGQYDGEENKRLDALRLAMELGADYIDVELQVAREFNNSISAKKPEKFKVIVSSHN 121
Query: 133 DCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERG 192
TPS EDLG LV+++QATGADI+K+ + DIT++ARIFQ+ H QVPII +GERG
Sbjct: 122 YENTPSVEDLGNLVAKIQATGADIVKIATTALDITDVARIFQITVHSQVPIIGLVMGERG 181
Query: 193 LVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGH 250
L+S+LL PKF G L + +L+ V G PT+ L Y I DTKVFG+I KPVGH
Sbjct: 182 LISRLLCPKFGGYLTFATLEAGKVSAPGQPTINDLLNVYNFRLIGPDTKVFGIIGKPVGH 241
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310
SK P+L+N F+ + +NG+YV + VDD+ KF TYSS DF GFSV P+KE +K C+EV
Sbjct: 242 SKSPLLYNSAFKSIGFNGVYVHLLVDDIAKFLQTYSSTDFVGFSVTIPHKENAVKCCNEV 301
Query: 311 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 370
P+A++I AVN II+R SDGKL GYNTD +I+AIED ++ SPLAG++
Sbjct: 302 DPVAKSIEAVNCIIKRQSDGKLFGYNTDYVGAISAIEDGLR------------SPLAGKL 349
Query: 371 FVLAGAGGAGRALAFGAKSRGARVVI 396
FV+ GAGGAG+ALA+GAK++GARVVI
Sbjct: 350 FVVIGAGGAGKALAYGAKAKGARVVI 375
>gi|224125422|ref|XP_002319582.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222857958|gb|EEE95505.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 521
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/398 (50%), Positives = 278/398 (69%), Gaps = 7/398 (1%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+ICAP+MA+SV+Q+L M +AK GADV E+R+D + NF P DLE ++ + PLP
Sbjct: 11 RNSTLICAPIMAESVDQMLVQMKRAKELGADVAEVRVDFLKNFSPRNDLEALIKQCPLPT 70
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
LI YRPKW GG Y+GDE+KR +AL +A +LGAD++D ELKVA + I
Sbjct: 71 LITYRPKWEGGQYDGDENKRQKALQIAMELGADFIDIELKVAQEFYNFIQGKKPEKVKII 130
Query: 128 VSC-NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
VS N +C TPS E++G LV+R+QATGADI+K+ + DIT+ AR+F ++ + QVP+I
Sbjct: 131 VSSHNYEC-TPSIEEIGDLVARIQATGADIVKVATTALDITDNARMFHIIVNLQVPMIGL 189
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+GERGL+S++L+ K+ L +GS++ V G PTV+ L + Y + I ADTKV G+I
Sbjct: 190 VMGERGLMSRVLAAKYGAFLTFGSIEAGVVSAPGQPTVKDLLELYNLRQIEADTKVHGVI 249
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
P+GHSK P L+N F+ V +NGIY+P+ VD + + STYSSPDFAG+S P+KE +
Sbjct: 250 GNPIGHSKSPHLYNAAFKSVGFNGIYLPLLVDSVANYISTYSSPDFAGYSYTIPHKEDGL 309
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
K CDEV P+A+ I A++ +IRRP DGKL GYN D +I AIE+A+ G NG + S
Sbjct: 310 KCCDEVDPIAKEIGAISCMIRRPDDGKLKGYNVDYLGAIAAIEEAL---GASNGAPASVS 366
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
PLAG++FV+ GAGGAG+ALA+GA +GARVV+ + +G
Sbjct: 367 PLAGKLFVVMGAGGAGKALAYGAYEKGARVVVANRTYG 404
>gi|195641452|gb|ACG40194.1| shikimate dehydrogenase [Zea mays]
Length = 540
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/400 (52%), Positives = 269/400 (67%), Gaps = 5/400 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KP 64
+T+ TM+C P A++ ++ + + A A GADV E+RLDC+ F P +DL +IL K +P
Sbjct: 17 VTRPRTMVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFTPRRDLPVILAKPRP 76
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
LP L+ YRPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA +
Sbjct: 77 LPALVTYRPKWEGGEYEGDDDSRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNC 136
Query: 125 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPII 184
+ IVS + TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQVPII
Sbjct: 137 KLIVSSHNYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQVPII 196
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINADTKVFG 242
+ +RG +S++L PK+ G L +GSLK PT L Y + I DTKVFG
Sbjct: 197 GLLMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVFG 256
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEA 302
+I KPVGHSK PILHN FR V +N +YVP VDDL KF TYSSPDFAGFS P+KEA
Sbjct: 257 IIGKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEA 316
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
++ CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED IK T
Sbjct: 317 AVRCCDEVDPIARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKA-SESEPTDPD 374
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
SPLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F
Sbjct: 375 KSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFA 414
>gi|281193024|gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]
Length = 526
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/393 (50%), Positives = 271/393 (68%), Gaps = 7/393 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ KN T+ICAP+MA SV+Q+L M +AK GAD+V +R+D + +F P D++ ++ + PL
Sbjct: 17 MRKNQTLICAPIMADSVDQMLILMQKAKTSGADLVGVRVDSLKSFNPRPDIDALIKQCPL 76
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRP W GG Y GDE RL+AL LA +LGADY+D ELK + + + +
Sbjct: 77 PTLFTYRPTWEGGQYAGDEMSRLDALRLAMELGADYIDVELKAIDEFNNALHGNKSAKCK 136
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + TPS EDLG LV+R+QA+GADI+K + DIT++AR+FQ+ H QVPIIA
Sbjct: 137 LIVSSHNYESTPSAEDLGNLVARIQASGADIVKFATTAQDITDVARVFQITVHSQVPIIA 196
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+GE+GL+S++L PKF G L +G+L+ V G PTVE L Y + DTK+FG+
Sbjct: 197 MVMGEKGLMSRILCPKFGGYLTFGTLEMGKVSAPGQPTVEDLLNLYNFRQLGPDTKIFGI 256
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I KPV HSK P+L+N +FR V +NG+++ + VDD+ FF TYSS DFAGFS P+KEA
Sbjct: 257 IGKPVSHSKPPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYSSLDFAGFSCTIPHKEAA 316
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ C E+ P A+AI AVN IIRRP DGKL G NTD +I+AIE+ ++ G + + G
Sbjct: 317 LDCCAEIDPTAKAIGAVNCIIRRP-DGKLFGCNTDYIGAISAIEEGLQ--GSQPSIS--G 371
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
SPLAG++FV+ GAGGAG+A+A+GAK +GARVVI
Sbjct: 372 SPLAGKLFVVIGAGGAGKAIAYGAKEKGARVVI 404
>gi|76782194|gb|ABA54867.1| putative 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Fagus sylvatica]
Length = 536
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/401 (51%), Positives = 275/401 (68%), Gaps = 18/401 (4%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
I KN T++CAP+MA+SV++++ NM +AK GAD+VEIRLD + +F P DL+ ++ + PL
Sbjct: 22 IRKNPTLVCAPIMAESVDKMVINMDKAKQGGADLVEIRLDSLKSFNPNGDLKTLIKECPL 81
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRPKW GG Y+GDE KRL+AL LA + GADY+D EL+VA Y +
Sbjct: 82 PTLFTYRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVAQEFNESIYGKKPEMFK 141
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VP 182
IVS + TPS EDLG LV+R+QATGADI+K + +IT++ARIFQ++ H Q VP
Sbjct: 142 VIVSSHNYQNTPSVEDLGNLVARIQATGADIVKFATTALEITDVARIFQIIVHSQVSSVP 201
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKV 240
IIA +GERG +S++L PKF G L +G+++ V G P ++ L Y I DTKV
Sbjct: 202 IIAIVMGERGFISRILCPKFGGFLSFGTIESGIVSAPGQPIMKDLLHLYNFRQIGPDTKV 261
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD-----FAGFSV 295
FG+I KPVGHSK PIL+N F+ V +NG+YV L + + SPD FAGFS+
Sbjct: 262 FGIIGKPVGHSKSPILYNEAFKSVGFNGVYV------LSWWMTCKISPDLLILRFAGFSI 315
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KEA +K CDEV P+A++I AVN I+RR +DGK+ GYNTD +I+AIED + RG
Sbjct: 316 TIPHKEAALKCCDEVDPVAKSIGAVNCIVRRSTDGKIFGYNTDYVGAISAIEDGL--RGS 373
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
KN + + SPLAG++FV+ GAGGAG+ALA+GAK +GARVVI
Sbjct: 374 KNISYAADSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVI 414
>gi|212274689|ref|NP_001130790.1| shikimate dehydrogenase1 [Zea mays]
gi|194690122|gb|ACF79145.1| unknown [Zea mays]
gi|413916608|gb|AFW56540.1| shikimate dehydrogenase [Zea mays]
Length = 543
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/403 (51%), Positives = 269/403 (66%), Gaps = 8/403 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KP 64
+T+ TM+C P A++ ++ + + A A GADV E+RLDC+ F P +DL +IL K +P
Sbjct: 17 VTRPRTMVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRP 76
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
LP L+ YRPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA +
Sbjct: 77 LPALVTYRPKWEGGEYEGDDESRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNC 136
Query: 125 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---V 181
+ IVS + TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ V
Sbjct: 137 KLIVSSHNYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQV 196
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTK 239
PII + +RG +S++L PK+ G L +GSLK PT L Y + I DTK
Sbjct: 197 PIIGLVMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTK 256
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
VFG+I KPVGHSK PILHN FR V +N +YVP VDDL KF TYSSPDFAGFS P+
Sbjct: 257 VFGIIGKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPH 316
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA ++ CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED IK T
Sbjct: 317 KEAAVRCCDEVDPVARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKA-SESEPT 374
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
SPLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F
Sbjct: 375 DPDKSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFA 417
>gi|413916609|gb|AFW56541.1| hypothetical protein ZEAMMB73_391045 [Zea mays]
gi|413916610|gb|AFW56542.1| hypothetical protein ZEAMMB73_391045 [Zea mays]
Length = 534
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/403 (51%), Positives = 269/403 (66%), Gaps = 8/403 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KP 64
+T+ TM+C P A++ ++ + + A A GADV E+RLDC+ F P +DL +IL K +P
Sbjct: 17 VTRPRTMVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRP 76
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
LP L+ YRPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA +
Sbjct: 77 LPALVTYRPKWEGGEYEGDDESRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNC 136
Query: 125 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---V 181
+ IVS + TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ V
Sbjct: 137 KLIVSSHNYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQV 196
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTK 239
PII + +RG +S++L PK+ G L +GSLK PT L Y + I DTK
Sbjct: 197 PIIGLVMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTK 256
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
VFG+I KPVGHSK PILHN FR V +N +YVP VDDL KF TYSSPDFAGFS P+
Sbjct: 257 VFGIIGKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPH 316
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA ++ CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED IK T
Sbjct: 317 KEAAVRCCDEVDPVARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKA-SESEPT 374
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
SPLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F
Sbjct: 375 DPDKSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFA 417
>gi|242085728|ref|XP_002443289.1| hypothetical protein SORBIDRAFT_08g016970 [Sorghum bicolor]
gi|241943982|gb|EES17127.1| hypothetical protein SORBIDRAFT_08g016970 [Sorghum bicolor]
Length = 541
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 206/397 (51%), Positives = 264/397 (66%), Gaps = 10/397 (2%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLIV 70
M+C P A++ ++ + A A GADV E+RLDC+ F P +DL +IL K +PLP L+
Sbjct: 23 MVCVPATARAPREMAEELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRPLPALVT 82
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRPKW GG YEGD+ R EAL LA +LGA+YVD E KVA + + IVS
Sbjct: 83 YRPKWEGGEYEGDDESRFEALLLAMELGAEYVDVEFKVADKFMKLISGKKPDNCKLIVSS 142
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYS 187
+ TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII
Sbjct: 143 HNYENTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLV 202
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLIS 245
+ +RG +S++L PK+ G L +GSLK PT L Y + I DTKVFG+I
Sbjct: 203 MNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINVYNIRQIGPDTKVFGIIG 262
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KPVGHSK PILHN FR V N +YVP VDDL KF +TYSSPDFAGFS P+KEA ++
Sbjct: 263 KPVGHSKSPILHNEAFRSVGSNAVYVPFLVDDLAKFLNTYSSPDFAGFSCTIPHKEAAVR 322
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED I+ T S SP
Sbjct: 323 CCDEVDPIARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIRA---SEQTDSDTSP 378
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
LAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F
Sbjct: 379 LAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFA 415
>gi|46371086|gb|AAS90325.1| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 1
[Nicotiana tabacum]
Length = 569
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/393 (49%), Positives = 273/393 (69%), Gaps = 7/393 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+T+N T+ICAP+MA +V+Q+L+ M +AK GAD+VE+RLD + +F P D++ I+ + PL
Sbjct: 17 MTRNETLICAPIMADTVDQMLNLMQKAKISGADLVEVRLDSLKSFNPQSDIDTIIKQSPL 76
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRP W GG Y GDE RL+AL +A +LGADY+D ELK + + + +
Sbjct: 77 PTLFTYRPTWEGGQYAGDEVSRLDALRVAMELGADYIDVELKAIDEFNTALHGNKSAKCK 136
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + TPS E+LG LV+R+QA+GADI+K + DI ++AR+FQ+ H QVPIIA
Sbjct: 137 VIVSSHNYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDVARVFQITVHSQVPIIA 196
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+GE+GL+S++L PKF G L +G+L+ V G PT++ L Y + DT++FG+
Sbjct: 197 MVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLNIYNFRQLGPDTRIFGI 256
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I KPV HSK P+L+N FR V +NG+Y+P+ VDD+ FF TYSS DFAG +V P+KEA+
Sbjct: 257 IGKPVSHSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSSLDFAGSAVTIPHKEAI 316
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ CDE++P A+ I AVN ++ R DGKL G NTD +I+AIE+A++ + + G
Sbjct: 317 VDCCDELNPTAKVIGAVNCVVSR-LDGKLFGCNTDYVGAISAIEEALQ----GSQPSMSG 371
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
SPLAG++FV+ GAGGAG+ALA+GAK +GARVVI
Sbjct: 372 SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVI 404
>gi|535771|gb|AAA34069.1| dehydroquinate dehydratase/shikimate dehydrogenase, partial
[Nicotiana tabacum]
Length = 579
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/393 (49%), Positives = 274/393 (69%), Gaps = 7/393 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+T+N T+ICAP+MA +V+Q+L+ M +AK GAD+VE+RLD + +F P D++ I+ + PL
Sbjct: 27 MTRNETLICAPIMADTVDQMLNLMQKAKISGADLVEVRLDSLKSFNPQSDIDTIIKQSPL 86
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRP W GG Y GDE RL+AL +A +LGADY+D ELK + + + +
Sbjct: 87 PTLFTYRPTWEGGQYAGDEVSRLDALRVAMELGADYIDVELKAIDEFNTALHGNKSAKCK 146
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + TPS E+LG LV+R+QA+GADI+K + DI ++AR+FQ+ H QVPIIA
Sbjct: 147 VIVSSHNYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDVARVFQITVHSQVPIIA 206
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+GE+GL+S++L PKF G L +G+L+ V G PT++ L Y + DT++FG+
Sbjct: 207 MVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLNIYNFRQLGPDTRIFGI 266
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I KPV HSK P+L+N FR V +NG+Y+P+ VDD+ FF TYSS DFAG +V P+KEA+
Sbjct: 267 IGKPVSHSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSSLDFAGSAVTIPHKEAI 326
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ CDE++P A+ I AVN ++ R DGKL G NTD +I+AIE+A++ G + + G
Sbjct: 327 VDCCDELNPTAKVIGAVNCVVSR-LDGKLFGCNTDYVGAISAIEEALQ--GSQPSMS--G 381
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
SPLAG++FV+ GAGGAG+ALA+GAK +GARVVI
Sbjct: 382 SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVI 414
>gi|45773760|gb|AAS76684.1| At3g06350 [Arabidopsis thaliana]
Length = 603
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 202/398 (50%), Positives = 272/398 (68%), Gaps = 2/398 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
+G +I KN ++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+
Sbjct: 84 IGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTII 143
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
K PLP L YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS +
Sbjct: 144 KKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKK 203
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
+ IVS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S Q
Sbjct: 204 PGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQ 263
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT 238
VP I +GERGL+S++L KF G L +G+L + V G PT++ L Y I DT
Sbjct: 264 VPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDT 323
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KV+G+I KPV HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P
Sbjct: 324 KVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIP 383
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KEA ++ CDEV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G +
Sbjct: 384 HKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSS 443
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
S SPLA + V+ GAGGAG+ALA+GAK +GA+VVI
Sbjct: 444 VPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVI 481
>gi|15230703|ref|NP_187286.1| Shikimate dehydrogenase [Arabidopsis thaliana]
gi|75207269|sp|Q9SQT8.1|DHQSD_ARATH RecName: Full=Bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic; Short=DHQ-SDH protein;
AltName: Full=DHQase-SORase; AltName: Full=Protein
EMBRYO DEFECTIVE 3004; Includes: RecName:
Full=Dehydroquinate dehydratase; Short=DHQ; Includes:
RecName: Full=Shikimate dehydrogenase; Short=SDH; Flags:
Precursor
gi|6437552|gb|AAF08579.1|AC011623_12 putative dehydroquinase shikimate dehydrogenase [Arabidopsis
thaliana]
gi|332640860|gb|AEE74381.1| Shikimate dehydrogenase [Arabidopsis thaliana]
Length = 603
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 202/398 (50%), Positives = 272/398 (68%), Gaps = 2/398 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
+G +I KN ++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+
Sbjct: 84 IGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTII 143
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
K PLP L YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS +
Sbjct: 144 KKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKK 203
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
+ IVS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S Q
Sbjct: 204 PGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQ 263
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT 238
VP I +GERGL+S++L KF G L +G+L + V G PT++ L Y I DT
Sbjct: 264 VPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDT 323
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KV+G+I KPV HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P
Sbjct: 324 KVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIP 383
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KEA ++ CDEV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G +
Sbjct: 384 HKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSS 443
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
S SPLA + V+ GAGGAG+ALA+GAK +GA+VVI
Sbjct: 444 VPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVI 481
>gi|109157947|pdb|2GPT|A Chain A, Crystal Structure Of Arabidopsis Dehydroquinate
Dehydratase- Shikimate Dehydrogenase In Complex With
Tartrate And Shikimate
Length = 523
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/391 (51%), Positives = 268/391 (68%), Gaps = 2/391 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
KN ++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+ K PLP
Sbjct: 2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + I
Sbjct: 62 LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLV 181
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+GERGL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I
Sbjct: 182 MGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KPV HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++
Sbjct: 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQ 301
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDEV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G + S SP
Sbjct: 302 CCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSP 361
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
LA + V+ GAGGAG+ALA+GAK +GA+VVI
Sbjct: 362 LASKTVVVIGAGGAGKALAYGAKEKGAKVVI 392
>gi|449503035|ref|XP_004161812.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/393 (49%), Positives = 266/393 (67%), Gaps = 5/393 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
I +N++++C P+MA S + ++++ +AK GAD+VEIRLD + F DL ++ + PL
Sbjct: 28 IKRNSSLVCVPIMADSADLMIADARKAKTSGADLVEIRLDSLKIFNQQTDLGTLVKECPL 87
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRPKW GG Y+GDE++RLE L L +LGADYVD EL+VA + +
Sbjct: 88 PTLFTYRPKWEGGQYDGDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCK 147
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + ETPS +DLG LV+R+Q +GADI+K+ + DIT+++RIF ++ H QVP+I
Sbjct: 148 VIVSSHNYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIG 207
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+GERGL+S++L KF G L + +L+ V G PT++ L Y I DTKV+G+
Sbjct: 208 LVMGERGLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGI 267
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I KPVGHSK P+L N F+ + +NG+YV VDD+ F TYSS DFAGFS P+KEA
Sbjct: 268 IGKPVGHSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAA 327
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
KFCDEV P+A++I AVN I+RR DGK GYNTD +I+AIE+ K +G G+ G
Sbjct: 328 AKFCDEVDPVAKSIGAVNCIVRR-HDGKFCGYNTDYVGAISAIEE--KLQGDYTGSPLSG 384
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
SPL GR+FV+ GAGGAG+ALA+GAK +GA+V+I
Sbjct: 385 SPLFGRLFVVIGAGGAGKALAYGAKEKGAKVMI 417
>gi|449461453|ref|XP_004148456.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/393 (49%), Positives = 265/393 (67%), Gaps = 5/393 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
I +N++++C P+MA S + ++++ +AK GAD+VEIRLD + F DL ++ + PL
Sbjct: 28 IKRNSSLVCVPIMADSADLMIADARKAKTSGADLVEIRLDSLKIFNQQTDLGTLVKECPL 87
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRPKW GG Y+GDE++RLE L L +LGADYVD EL+VA + +
Sbjct: 88 PTLFTYRPKWEGGQYDGDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCK 147
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + ETPS +DLG LV+R+Q +GADI+K+ + DIT+++RIF ++ H QVP+I
Sbjct: 148 VIVSSHNYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIG 207
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+GERGL+S++L KF G L + +L+ V G PT++ L Y I DTKV+G+
Sbjct: 208 LVMGERGLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGI 267
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I KPVGHSK P+L N F+ + +NG+YV VDD+ F TYSS DFAGFS P+KEA
Sbjct: 268 IGKPVGHSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAA 327
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
KFCDEV P+A+ I AVN I+RR DGK GYNTD +I+AIE+ K +G G+ G
Sbjct: 328 AKFCDEVDPVAKVIXAVNCIVRR-HDGKFCGYNTDYVGAISAIEE--KLQGDYTGSPLSG 384
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
SPL GR+FV+ GAGGAG+ALA+GAK +GA+V+I
Sbjct: 385 SPLFGRLFVVIGAGGAGKALAYGAKEKGAKVMI 417
>gi|350537731|ref|NP_001234051.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
gi|3169883|gb|AAC17991.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
gi|3169888|gb|AAC17993.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
Length = 545
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 200/412 (48%), Positives = 271/412 (65%), Gaps = 26/412 (6%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ KN T+ICAP+MA SV+Q+L M +AK GAD+VE+R+D + +F P D++ ++ + PL
Sbjct: 17 MRKNQTLICAPIMADSVDQMLILMQKAKISGADLVEVRVDSLKSFNPRPDIDTLIKQCPL 76
Query: 66 PVLIVYR-------------------PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFEL 106
P L Y P W GG Y GDE RL+AL LA +LGADY+D EL
Sbjct: 77 PTLFTYSYVLGVGQGILLIRYYKGIGPTWEGGQYAGDEKSRLDALRLAMELGADYIDVEL 136
Query: 107 KVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDI 166
K + + + + IVS + TPS EDLG LV+R+QA+GADI+K + DI
Sbjct: 137 KAIGEFNNALHGNKSAKCKLIVSSHNYESTPSAEDLGNLVARIQASGADIVKFATTAQDI 196
Query: 167 TEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVES 224
T++AR+FQ+ H QVPIIA +GE+GL+S++L PKF G L +G+L+ V G PTVE
Sbjct: 197 TDVARVFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTVED 256
Query: 225 LRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST 284
L Y + DTK+FG+I KPV HSK P+L+N +FR V +NG+++ + VDD+ FF T
Sbjct: 257 LLNLYNFRQLGPDTKIFGIIGKPVSHSKSPLLYNESFRSVGFNGVFMHLLVDDIANFFRT 316
Query: 285 YSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASIT 344
YSS DFAGFS P+KEA + C E+ P A+AI AVN IIRRP DGKL G NTD +I+
Sbjct: 317 YSSLDFAGFSCTIPHKEAALDCCAEIDPTAKAIGAVNCIIRRP-DGKLFGCNTDYIGAIS 375
Query: 345 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
AIE+ ++ G + + GSPLAG++FV+ GAGGAG+A+A+GAK +GARVVI
Sbjct: 376 AIEEGLQ--GSQPSIS--GSPLAGKLFVVIGAGGAGKAIAYGAKEKGARVVI 423
>gi|160877702|pdb|2O7Q|A Chain A, Crystal Structure Of The A. Thaliana
Dhq-Dehydroshikimate-Sdh- Shikimate-Nadp(H)
gi|160877703|pdb|2O7S|A Chain A, Crystal Structure Of The A. Thaliana
Dhq-dehydroshikimate-sdh- Shikimate-nadp(h)
Length = 523
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 199/391 (50%), Positives = 267/391 (68%), Gaps = 2/391 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
KN ++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+ K PLP
Sbjct: 2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + I
Sbjct: 62 LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLV 181
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+GERGL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I
Sbjct: 182 MGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KPV HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++
Sbjct: 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQ 301
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDEV PLA++I AVNTI+RR SDGKL+GYNTD SI+AIED ++ G + S SP
Sbjct: 302 XCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDXIGSISAIEDGLRSSGDPSSVPSSSSP 361
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
LA + V+ GAGGAG+ALA+GAK +GA+VVI
Sbjct: 362 LASKTVVVIGAGGAGKALAYGAKEKGAKVVI 392
>gi|58041010|gb|AAW63134.1| dehydroquinate dehydratase/shikimate dehydrogenase [Arabidopsis
thaliana]
Length = 510
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 198/388 (51%), Positives = 266/388 (68%), Gaps = 2/388 (0%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+ K PLP L
Sbjct: 1 SLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLFT 60
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + IVS
Sbjct: 61 YRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSS 120
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I +GE
Sbjct: 121 HNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVMGE 180
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RGL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I KPV
Sbjct: 181 RGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKPV 240
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++ CD
Sbjct: 241 SHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCD 300
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
EV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G + S SPLA
Sbjct: 301 EVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLAS 360
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVI 396
+ V+ GAGGAG+ALA+GAK +GA+VVI
Sbjct: 361 KTVVVIGAGGAGKALAYGAKEKGAKVVI 388
>gi|259479224|dbj|BAI40147.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Diospyros
kaki]
Length = 508
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 186/387 (48%), Positives = 259/387 (66%), Gaps = 4/387 (1%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MICAP+MA++ EQ+L M +AK GAD+VEIR+D + +F P + LE+++ + PLP +I Y
Sbjct: 1 MICAPVMAETAEQMLGQMRKAKELGADLVEIRIDYLKSFSPQQHLEVLIKQSPLPTIITY 60
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP W GG Y+GDE +R LH A +LGADY+D ELKVA + IVS +
Sbjct: 61 RPTWEGGQYDGDESRRQATLHQAMELGADYIDIELKVADEFFSSIQERSPKRPKVIVSSH 120
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TPS E++G + +R+QATGADI+K+ + DIT+ ARI QL++H QVP I ++GER
Sbjct: 121 NYENTPSAEEIGNIAARIQATGADIVKIATTALDITDSARILQLIAHSQVPTIGLAMGER 180
Query: 192 GLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
GL+S++L KF G L +G+L+ G PT+ L Y I DTKV G+I P+G
Sbjct: 181 GLISRILCAKFGGFLTFGALESGIHSAPGQPTLRDLLDLYNFRQIEPDTKVHGVIGNPIG 240
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
HSK P L+N F+ +NGIY+P+ VD++ F +TYSSPDF G+S P+K A ++ CDE
Sbjct: 241 HSKSPHLYNTAFKKAAFNGIYLPLLVDNVANFLNTYSSPDFTGYSYTIPHKMAGLECCDE 300
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
V P+A+AI A++ +I++PSDGKLIGYN D +I AIE+ + + + SPLAGR
Sbjct: 301 VDPIAKAIGAISCMIKKPSDGKLIGYNVDYLGAIAAIEEGLGGSSSASNGSV--SPLAGR 358
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVVI 396
+FV+ GAGGA +ALA+G K +GARVV+
Sbjct: 359 LFVVIGAGGAAKALAYGGKEKGARVVV 385
>gi|357151512|ref|XP_003575813.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 549
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 202/398 (50%), Positives = 267/398 (67%), Gaps = 10/398 (2%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLI 69
T++C P A++ ++ + + A A GADV E+RLD ++ F P +DL +L K + LP L+
Sbjct: 22 TLLCVPATARAPREMAAEVAAAAALGADVAELRLDRLSGFAPRRDLPALLAKPRALPALV 81
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
YRPKW GG Y+GD+ R EAL LA +LGA+YVD ELKVA + + IVS
Sbjct: 82 TYRPKWEGGEYDGDDEPRFEALQLAMELGAEYVDIELKVADKFMKFMSGKKPEKCKLIVS 141
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAY 186
+ TPS E+LG L++++QATGADI+K+ + +I +++R+FQ+L HCQ VPII
Sbjct: 142 SHNYDNTPSAEELGSLLAQIQATGADIVKIATTATEIVDVSRMFQILVHCQEKQVPIIGL 201
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLI 244
+ +RG +S++L PKF G L +GSL KG PT L Y + I DT+VFG+I
Sbjct: 202 VMNDRGFISRVLCPKFGGYLTFGSLAKGKESAPAQPTAADLINVYNIRQIGPDTRVFGII 261
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
KPVGHSK PILHN FR V + +YVP VDDL +F +TYSSPDFAGFS P+KEA +
Sbjct: 262 GKPVGHSKSPILHNEAFRSVGMDAVYVPFLVDDLARFLTTYSSPDFAGFSCTIPHKEAAV 321
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ CDEV P+A+ I AVNTI+RR SDGKL+GYNTD +I+AIED I+ T S S
Sbjct: 322 RCCDEVDPIARDIGAVNTIVRR-SDGKLVGYNTDYVGAISAIEDGIRA---SQSTHSTAS 377
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
PLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F
Sbjct: 378 PLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFA 415
>gi|397911052|gb|AFO68802.1| shikimate dehydrogenase, partial [Gunnera manicata]
Length = 355
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/368 (48%), Positives = 247/368 (67%), Gaps = 15/368 (4%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
++C PLM +V+Q+L M +AK GAD+VEIRLDC+ F PG+ L I++ + PLP L+ Y
Sbjct: 1 LLCTPLMGTTVDQMLLEMRKAKDIGADLVEIRLDCLRTFNPGQVLNILIKQCPLPTLVTY 60
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP W GG YEGDE+KR +AL LA +LGA YVD EL+VA++ + G + IVS +
Sbjct: 61 RPVWEGGQYEGDENKRQDALRLAMELGAAYVDIELEVANDFNNSIAAKKPDGFKIIVSSH 120
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TPS E +G LV+R+QATGADI+K+ + DIT+ ARIFQ+ + Q+P+I +GER
Sbjct: 121 NFHNTPSLEGIGNLVARIQATGADIVKIATTALDITDCARIFQITVNSQIPMIGIVMGER 180
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
GL+S++LSPKF G L +G+L+ + G PT + L + Y IN DTKV+G+I KPVG
Sbjct: 181 GLISRILSPKFGGYLTFGALEAGAISAPGQPTAKDLVELYNFRLINPDTKVYGIIGKPVG 240
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
HSK P+L N +++ + N +YV + VDD++KFF+TYS+ DF GFS P+KEA +K E
Sbjct: 241 HSKSPLLFNESWKSIGLNSVYVHLLVDDVEKFFATYSALDFFGFSCTIPHKEAALKCMAE 300
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ P+A+ I A+N I++RP DGK YNTD +I IED ++ SPLAG+
Sbjct: 301 IDPIAKKIGAINNIVKRP-DGKFKAYNTDYIGAIAGIEDELR------------SPLAGK 347
Query: 370 MFVLAGAG 377
+FV+ GAG
Sbjct: 348 LFVVLGAG 355
>gi|255542474|ref|XP_002512300.1| 3-dehydroquinate dehydratase, putative [Ricinus communis]
gi|223548261|gb|EEF49752.1| 3-dehydroquinate dehydratase, putative [Ricinus communis]
Length = 368
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 240/346 (69%), Gaps = 2/346 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+ICAP+MA+SV+ +L + +AK GAD+VEIR+D + NF P +DLEI++ + LP
Sbjct: 21 RNSTLICAPVMAKSVDGMLVQINKAKELGADLVEIRVDFLENFSPIQDLEILIKQSALPT 80
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
LI YRPKW G Y+GDE KR EAL LA +LG+D++D ELKVA + I
Sbjct: 81 LITYRPKWEVGEYDGDESKRQEALRLAIELGSDFIDVELKVAPEFFNSIQGKKPEKVKII 140
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS E++ LV+++Q+TGADI+K+ + DIT+ AR+FQ+L H QVP+I
Sbjct: 141 VSSHNYENTPSVEEIANLVAKIQSTGADIVKVATTALDITDNARMFQVLVHAQVPMIGIV 200
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S++L+ KF G L +GS++ V G PT+ L Y + I ADTKV G+I
Sbjct: 201 MAERGLMSRILAAKFGGFLTFGSIEAGVVSAPGQPTITDLLDLYNLRQIGADTKVHGVIG 260
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
P+GHSK P L+N F+ V +NGIY+P+ VD++ + STYSS DF G+S P+KEA +K
Sbjct: 261 NPIGHSKSPHLYNSAFKSVRFNGIYLPLLVDNVANYISTYSSSDFVGYSYTIPHKEAGLK 320
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
CDEV P+AQAI A++ +IRRPSDGKL+GYN D +I AIE+A++
Sbjct: 321 CCDEVDPIAQAIGAISCMIRRPSDGKLMGYNVDYLGAIGAIEEALR 366
>gi|222617206|gb|EEE53338.1| hypothetical protein OsJ_36349 [Oryza sativa Japonica Group]
Length = 531
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 201/398 (50%), Positives = 267/398 (67%), Gaps = 10/398 (2%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLI 69
T++C P A++ ++ + A A GADV E+RLD + F P +DL ++L + +PLP L+
Sbjct: 20 TLLCVPATARAPREMAAEFAAAAALGADVAELRLDRLAGFAPRRDLPVLLAQPRPLPALV 79
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
YRPKW GG YEGD+ R EAL LA ++GA+YVD ELKVA + + IVS
Sbjct: 80 TYRPKWEGGEYEGDDEPRFEALLLAMEMGAEYVDIELKVADKFMKLISGKKPETCKLIVS 139
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAY 186
+ TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII
Sbjct: 140 SHNFENTPSTEELENLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGL 199
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLI 244
+ +RG +S++L PKF G L +GSL KG PTV L Y ++ I DTKV+G+I
Sbjct: 200 VMNDRGFISRVLCPKFGGYLTFGSLEKGKESAPAQPTVTDLINVYNIKQIGPDTKVYGII 259
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
KPVGHSK PILHN FR V N +YVP VDDL F +TYSSP+FAGFS P+KEA +
Sbjct: 260 GKPVGHSKSPILHNEAFRSVGLNAVYVPFLVDDLANFLNTYSSPEFAGFSCTIPHKEAAV 319
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ CDEV P+A+ I AVNTIIR+P +GKL+GYNTD +I+AIED I+ T + S
Sbjct: 320 RCCDEVDPIAKDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIRA---SQPTDTTTS 375
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
PLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F
Sbjct: 376 PLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFA 413
>gi|218186992|gb|EEC69419.1| hypothetical protein OsI_38581 [Oryza sativa Indica Group]
Length = 531
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/398 (50%), Positives = 268/398 (67%), Gaps = 10/398 (2%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLI 69
T++C P A++ ++ + + A A GADV E+RLD + F P +DL ++L + +PLP L+
Sbjct: 20 TLLCVPATARAPREMAAELAAAAALGADVAELRLDRLAGFAPRRDLPVLLAQPRPLPALV 79
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
YRPKW GG YEGD+ R EAL LA ++GA+YVD ELKVA + + IVS
Sbjct: 80 TYRPKWEGGEYEGDDEPRFEALLLAMEMGAEYVDIELKVADKFMKLISGKKPETCKLIVS 139
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAY 186
+ TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII
Sbjct: 140 SHNFENTPSTEELENLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGL 199
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLI 244
+ +RG +S++L PKF G L +GSL KG PTV L Y ++ I DTKV+G+I
Sbjct: 200 VMNDRGFISRVLCPKFGGYLTFGSLEKGKESAPAQPTVTDLINVYNIKQIGPDTKVYGII 259
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
KPVGHSK PILHN FR V N +YVP VDDL F +TYSSP+FAGFS P+KEA +
Sbjct: 260 GKPVGHSKSPILHNEAFRSVGLNAVYVPFLVDDLANFLNTYSSPEFAGFSCTIPHKEAAV 319
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ CDEV P+A+ I AVNTIIR+P +GKL+GYNTD +I+AIED I+ T + S
Sbjct: 320 RCCDEVDPIAKDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIRA---SQPTDTTTS 375
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
PLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F
Sbjct: 376 PLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFA 413
>gi|326502876|dbj|BAJ99066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 532
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 204/398 (51%), Positives = 263/398 (66%), Gaps = 10/398 (2%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLI 69
T+IC P A++ + + + A A GAD+ E+RLD + F P +DL +L K + LP L+
Sbjct: 22 TLICVPATARAPRDMAAEVAAAAALGADLAELRLDRLAGFAPRRDLPALLAKPRTLPTLV 81
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
YRPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA + + IVS
Sbjct: 82 TYRPKWEGGEYEGDDEPRFEALQLAMELGAEYVDIELKVADKFIKFMSGKKPENCKLIVS 141
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAY 186
+ TPS E+L L++++QATGADI+K+ + +I +++R+FQ+L HCQ VPII
Sbjct: 142 SHNYDNTPSAEELASLLAQIQATGADIVKIATTATEIVDVSRMFQILVHCQEKQVPIIGL 201
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLI 244
+ +RG +S++L PKF G L +GSL KG PT L Y + I DTKVFG+I
Sbjct: 202 VMNDRGFISRVLCPKFGGYLTFGSLEKGKESAAAQPTAADLINVYNIRQIGPDTKVFGII 261
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
PVGHSK PILHN FR V + +YVP VDDL KF STYSSPDFAGFS P+KEA +
Sbjct: 262 GNPVGHSKSPILHNEAFRSVGLHAVYVPFLVDDLAKFLSTYSSPDFAGFSCTIPHKEAAV 321
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ CDEV P+A+ I AVNTIIR+P DGKL+GYNTD +I+AIED I+ T S S
Sbjct: 322 RCCDEVDPIARDIGAVNTIIRKP-DGKLVGYNTDYVGAISAIEDGIRA---TQPTHSTTS 377
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
PLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F
Sbjct: 378 PLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFA 415
>gi|54290768|dbj|BAD61389.1| putative dehydroquinate dehydratase [Oryza sativa Japonica Group]
Length = 657
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/392 (49%), Positives = 266/392 (67%), Gaps = 7/392 (1%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCI-NNFQPGKDLEIILTKKPLP 66
+ T++C PL+A++VE + ++ A A GAD+VEIRLD I + F+P +DL +L PLP
Sbjct: 82 EEMTLLCVPLVARTVEAMRADAAAAAAAGADLVEIRLDFIGSKFRPREDLPRLLRGCPLP 141
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
++ YRP W GG YEGD+ R EAL LA +LG +YVD ELKVA + Y S +
Sbjct: 142 AIVTYRPNWEGGQYEGDDATRFEALRLAMELGVNYVDIELKVADKFISFIYGSKPEKCKL 201
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
IVS + TPS E+L LV+R+QA GADI+K+ + NDI +++++FQ++ HCQVP+I
Sbjct: 202 IVSAHNYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQVPMIGL 261
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPV--LGLPTVESLRQTYKVEHINADTKVFGLI 244
+GE+GL+S++LSPKF G L +GSL T V G PTVE L Y + I DTKV G+I
Sbjct: 262 VMGEKGLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIYDIRRIGPDTKVLGVI 321
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
+ PV SK P+LHN + V YN +Y+P+ D++ +F STYSSPDF+GFS P+K +
Sbjct: 322 ANPVKQSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAV 381
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ C E P+A++I A++TIIRRP DGKL+GYN D +I AIED I G KN +
Sbjct: 382 QCCHEHDPVAKSIGAISTIIRRP-DGKLLGYNNDYIGAICAIEDGIGGPGSKNAAV---T 437
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
PLAGR+ V+ GAGGAG+A+A+GAK +GAR+V+
Sbjct: 438 PLAGRLLVVVGAGGAGKAIAYGAKEKGARIVV 469
>gi|115436640|ref|NP_001043078.1| Os01g0375200 [Oryza sativa Japonica Group]
gi|113532609|dbj|BAF04992.1| Os01g0375200, partial [Oryza sativa Japonica Group]
Length = 572
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/388 (49%), Positives = 264/388 (68%), Gaps = 6/388 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL++++VE + ++ A A GAD+VEIRLD I F+P + L +L PLP L+
Sbjct: 65 TLLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPLPALVT 124
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG Y+GD+ R EAL LA +LG DYVD ELKVA + S + IVS
Sbjct: 125 YRPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSS 184
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E+L LV+R+QA G+DI+K+ + +DI +++R+FQ++ HCQVP+I +GE
Sbjct: 185 HNYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMGE 244
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S++LSPKF G L +G+L T + G PTV+ L Y + I DTKV GLI+ PV
Sbjct: 245 KGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPV 304
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ DDL +F STYSSPDF+GFS P+K ++ C
Sbjct: 305 KQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCH 364
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ SPLAG
Sbjct: 365 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAI---SPLAG 420
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVI 396
R+ V+ GAGGAG+A+A+GAK +GARVV+
Sbjct: 421 RLVVVVGAGGAGKAIAYGAKEKGARVVV 448
>gi|54290767|dbj|BAD61388.1| putative dehydroquinate dehydratase [Oryza sativa Japonica Group]
gi|125570444|gb|EAZ11959.1| hypothetical protein OsJ_01832 [Oryza sativa Japonica Group]
Length = 509
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/388 (49%), Positives = 264/388 (68%), Gaps = 6/388 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL++++VE + ++ A A GAD+VEIRLD I F+P + L +L PLP L+
Sbjct: 2 TLLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPLPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG Y+GD+ R EAL LA +LG DYVD ELKVA + S + IVS
Sbjct: 62 YRPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E+L LV+R+QA G+DI+K+ + +DI +++R+FQ++ HCQVP+I +GE
Sbjct: 122 HNYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMGE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S++LSPKF G L +G+L T + G PTV+ L Y + I DTKV GLI+ PV
Sbjct: 182 KGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ DDL +F STYSSPDF+GFS P+K ++ C
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCH 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ SPLAG
Sbjct: 302 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAI---SPLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVI 396
R+ V+ GAGGAG+A+A+GAK +GARVV+
Sbjct: 358 RLVVVVGAGGAGKAIAYGAKEKGARVVV 385
>gi|357475825|ref|XP_003608198.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
gi|355509253|gb|AES90395.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
Length = 506
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 188/395 (47%), Positives = 268/395 (67%), Gaps = 28/395 (7%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLPV 67
N +IC P+M ++++++++++ +AK GAD+VEIRLD + F P +DL + + LP
Sbjct: 2 NAMLICVPIMGETIQKMIADIQKAKLNGADLVEIRLDSLKTFNPSQDLNTFMQQHHSLPF 61
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSG 123
L YRPKW GG+Y+GDE++RL+AL LA +L ADY+D ELKVA +I GK Y+
Sbjct: 62 LFTYRPKWEGGMYDGDENQRLDALQLAMELEADYIDVELKVAHQFYDSIRGKTYNK---- 117
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPI 183
T+ IVS + +TPS EDLG LV+R+QATGADI+K+ + +IT++AR+FQ++ H QVP
Sbjct: 118 TKVIVSSHNYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFQIMVHSQVPF 177
Query: 184 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVF 241
I +G+RGL+S++L KF G L +G+L+ V G PT++ L Y I +TKVF
Sbjct: 178 IGLVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPNTKVF 237
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
G++ KP + ++G++V + VDDL F TYSS DF GFSV P+KE
Sbjct: 238 GIVGKPT---------------IGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKE 282
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
A +K CDEV P+A++I VN ++RRP+DGKLIGYNTD +I+AIED + RG N + +
Sbjct: 283 AALKCCDEVDPVAKSIGVVNCVVRRPTDGKLIGYNTDYVGAISAIEDGL--RGKHNDSGT 340
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
SPL G++FV+ GAGGAG+ALA+GAK +GAR+VI
Sbjct: 341 AVSPLVGKLFVVIGAGGAGKALAYGAKEKGARIVI 375
>gi|414877458|tpg|DAA54589.1| TPA: hypothetical protein ZEAMMB73_882303 [Zea mays]
Length = 401
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/394 (47%), Positives = 260/394 (65%), Gaps = 6/394 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL+ ++VE+++++ A A G D+VEIRLD I F+P + L +L PLP L+
Sbjct: 2 TLLCVPLVGRTVEEMITDAAAAAATGGDMVEIRLDFIQGFRPREHLPPLLRGCPLPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG YEGD+ R E L LA +LG DYVD ELKVA + + IVS
Sbjct: 62 YRPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFIAGHKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E++ LV+ +QA GADI+K+ + DI +++R+FQ++ HCQVP+I + E
Sbjct: 122 HNYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPV--LGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S++L+PKF G L +G L T G PTVE L Y ++ I DTK+ GLI+ PV
Sbjct: 182 KGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLIANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ D+L F TYSSPDF+GFS P+K ++ CD
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCD 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ SPLAG
Sbjct: 302 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAVI---SPLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
R+ V+ GAGGAG+A+A+GAK +GARVVI + +G
Sbjct: 358 RLIVVVGAGGAGKAIAYGAKEKGARVVIANRTYG 391
>gi|226499578|ref|NP_001152357.1| LOC100285997 [Zea mays]
gi|195655441|gb|ACG47188.1| shikimate biosynthesis protein aroDE [Zea mays]
gi|414877457|tpg|DAA54588.1| TPA: shikimate biosynthesis protein aroDE [Zea mays]
Length = 509
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/388 (48%), Positives = 257/388 (66%), Gaps = 6/388 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL+ ++VE+++++ A A G D+VEIRLD I F+P + L +L PLP L+
Sbjct: 2 TLLCVPLVGRTVEEMITDAAAAAATGGDMVEIRLDFIQGFRPREHLPPLLRGCPLPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG YEGD+ R E L LA +LG DYVD ELKVA + + IVS
Sbjct: 62 YRPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFIAGHKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E++ LV+ +QA GADI+K+ + DI +++R+FQ++ HCQVP+I + E
Sbjct: 122 HNYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPV--LGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S++L+PKF G L +G L T G PTVE L Y ++ I DTK+ GLI+ PV
Sbjct: 182 KGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLIANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ D+L F TYSSPDF+GFS P+K ++ CD
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCD 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ SPLAG
Sbjct: 302 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAVI---SPLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVI 396
R+ V+ GAGGAG+A+A+GAK +GARVVI
Sbjct: 358 RLIVVVGAGGAGKAIAYGAKEKGARVVI 385
>gi|242053027|ref|XP_002455659.1| hypothetical protein SORBIDRAFT_03g018040 [Sorghum bicolor]
gi|241927634|gb|EES00779.1| hypothetical protein SORBIDRAFT_03g018040 [Sorghum bicolor]
Length = 509
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/388 (48%), Positives = 258/388 (66%), Gaps = 6/388 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL+ ++VE+++++ A A G D+VEIRLD I F+P + L + PLP L+
Sbjct: 2 TLLCVPLVGRTVEEMIADAAAAAATGGDMVEIRLDFIQGFRPREHLPPLFRSCPLPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG YEGD+ R E L LA +LG DYVD ELKVA + + IVS
Sbjct: 62 YRPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFISGHKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E++ LV+R+QA GADI+K+ + DI +++R+FQ++ HCQVP+I + E
Sbjct: 122 HNYEYTPSCEEITNLVARIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPV--LGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RGL+S++L+PKF G L +G L T G PTVE L Y ++ I DTKV GLI+ PV
Sbjct: 182 RGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLNIYNIKCIGPDTKVLGLIANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ D+L F TYSSPDF+GFS P+K ++ CD
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCD 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ + SPLAG
Sbjct: 302 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAS---SPLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVI 396
R+ V+ GAGGAG+A+A+GAK +GARVVI
Sbjct: 358 RLVVVVGAGGAGKAIAYGAKEKGARVVI 385
>gi|356574916|ref|XP_003555589.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 630
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/393 (45%), Positives = 265/393 (67%), Gaps = 2/393 (0%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ +N+T+ICA A+SVE+++ M + K GAD+VE RLD +N+F P + L ++ +PL
Sbjct: 115 VRRNSTLICASTSAESVEEMVFEMVKGKELGADLVEARLDFLNDFHPTQHLPSLINNRPL 174
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P+LI YRP W GG Y+GDE +R +AL LA +LG+++VD ELKVA +
Sbjct: 175 PILITYRPIWEGGEYDGDESQRQDALRLAIELGSEFVDVELKVADEFYKSIGGKKAESVK 234
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + TPS E++G L +R+QATGAD++K+ + DIT+ AR+FQ+L H QVP+I
Sbjct: 235 IIVSSHNLESTPSVEEIGNLAARIQATGADVVKIATTALDITDCARLFQVLVHSQVPMIG 294
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
++GE+G +S++L KF G L +GS++ + G T++ L Y I TKV G+
Sbjct: 295 IAMGEKGFISRVLCAKFGGFLTFGSIEAGAISAPGQTTIKELLDLYNFRQIGVGTKVHGV 354
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I P+GHSK P L+NP F+ V ++GIY+P+ +D++ F +TYSSPDF G+S P+K+
Sbjct: 355 IGNPIGHSKSPHLYNPAFKSVGFDGIYLPLLIDNVSDFLNTYSSPDFVGYSYTIPHKQNG 414
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
++ CDEV P+A+AI A++ +I+RP+DG+LIGYN D +I AIE+ + + + S
Sbjct: 415 LRCCDEVDPIAKAIGAISCMIKRPNDGRLIGYNFDYLGAIAAIEERLHLQDSNGRSISGC 474
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
SPL G++FV+ GAGGAG+ALA+G K +GARVV+
Sbjct: 475 SPLYGKLFVVMGAGGAGKALAYGGKEKGARVVV 507
>gi|218188248|gb|EEC70675.1| hypothetical protein OsI_01994 [Oryza sativa Indica Group]
Length = 509
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 191/388 (49%), Positives = 263/388 (67%), Gaps = 6/388 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL++++VE + ++ A A GAD+VEIRLD I F+P + L +L P+P L+
Sbjct: 2 TLLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPIPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG Y+GD+ R EAL LA +LG DYVD ELKVA + S + IVS
Sbjct: 62 YRPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E+L LV+R+QA G+DI+K+ + +DI +++R+FQ++ HCQVP+I + E
Sbjct: 122 HNYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMSE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S++LSPKF G L +G+L T + G PTV+ L Y + I DTKV GLI+ PV
Sbjct: 182 KGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ DDL +F STYSSPDF+GFS P+K ++ C
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCH 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ SPLAG
Sbjct: 302 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAI---SPLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVI 396
R+ V+ GAGGAG+A+A+GAK +GARVV+
Sbjct: 358 RLVVVVGAGGAGKAIAYGAKEKGARVVV 385
>gi|357132175|ref|XP_003567707.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 509
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/388 (48%), Positives = 255/388 (65%), Gaps = 6/388 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL+A++VE++ ++ A A G D+VEIRLD I F+P + L +L PLP L+
Sbjct: 2 TLLCVPLVARTVEEMETDAAAAAAAGGDLVEIRLDFIEGFRPREHLPRLLHGCPLPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG Y+GD+ R E L LA +LGA YVD ELKVA + + IVS
Sbjct: 62 YRPNWEGGRYDGDDATRFETLRLAMELGAVYVDIELKVADKFINFLSGYKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E+L LV+R+QA GADI+K+ + DI +++R+FQ++ HCQVP+I + E
Sbjct: 122 HNYESTPSCEELANLVARIQAVGADIVKVATTATDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPV--LGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RGL+S++LSPKF G L +G L T G PTVE L Y + I DTKV GL++ PV
Sbjct: 182 RGLMSRVLSPKFGGYLTFGILDTTKTSASGQPTVEELLDIYNIRSIGPDTKVLGLVANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + V Y+ +Y+P+ DDL +F TYSSPDF+GFS P+K + C
Sbjct: 242 KQSKSPILHNKCLQSVGYDAVYLPLLADDLARFLDTYSSPDFSGFSCSLPFKVDAVHCCH 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E +A++I A+NTIIR+P DGKL+GYNTD +I+AIED I G K+ SPLAG
Sbjct: 302 EHDTVAKSIGAINTIIRKP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAV---SPLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVI 396
R+ V+ GAGGAG+A+A+GAK +GARVV+
Sbjct: 358 RLIVVVGAGGAGKAIAYGAKKKGARVVV 385
>gi|168017409|ref|XP_001761240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687580|gb|EDQ73962.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 519
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/393 (45%), Positives = 259/393 (65%), Gaps = 7/393 (1%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
+IC PL A++V+++L + AK GADV E+R+D I+ F DL ++L KPLPV++
Sbjct: 8 LICVPLTAKTVKKMLFQLELAKESGADVAELRVDLISGFDAAADLPVLLKDKPLPVIVTP 67
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R KW GG Y+G E R + L +A DLGADY+D ELKVA + + S + T I+ N
Sbjct: 68 RAKWEGGEYKGSEESRQDILRMAYDLGADYIDVELKVAGGFIQELRSRGKDSTTKIIVSN 127
Query: 132 LDCE-TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ + TPS+E++ + +M ATG DI+K V + DIT++A++F LS + P I ++G
Sbjct: 128 HNWDFTPSDEEIHATIEQMWATGGDIVKYVTTAQDITDVAQVFHFLSESKGPTIGLAMGP 187
Query: 191 RGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
G++S+LL+PKF G L +G+L KG G PTV+ L + Y+V+ ++ DT V+G+I KPV
Sbjct: 188 AGMISRLLAPKFGGYLTFGALCKGQESAPGQPTVQDLIEVYRVKSMDRDTMVYGVIGKPV 247
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
HSKGP+LHN F +N N +YVP+ VDD KF + ++ PDF GFSV PYKE +K CD
Sbjct: 248 YHSKGPVLHNKGFEELNLNKVYVPLLVDDFNKFMNVFNRPDFHGFSVTIPYKEDALKLCD 307
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
V A+ I AVNT++R + G+ GYNTDCE +++AIE ++ G N +PL G
Sbjct: 308 RVENAAKIIGAVNTVVRE-TTGEYQGYNTDCEGALSAIEKGLRHSGLANNDE---TPLKG 363
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
++FV+ GAGGAG+ALA+GAK R ARVV+ + ++
Sbjct: 364 KLFVVIGAGGAGKALAYGAKERHARVVVANRNY 396
>gi|356577650|ref|XP_003556937.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 479
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/356 (49%), Positives = 241/356 (67%), Gaps = 23/356 (6%)
Query: 63 KPLPVLIVYR-------PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SN 111
+P P+L+ R PK GG+Y+G E+KRL+AL LA +LGADYVD +L+VA +
Sbjct: 15 EPRPLLVYRRRNKTQQGPKLEGGMYDGGENKRLDALRLAMELGADYVDVQLQVAYEFYDS 74
Query: 112 ILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIAR 171
I GK ++ T+ IVS + TPS EDLG LV+R+QATGADI+K+ + DIT++AR
Sbjct: 75 IRGKTFNK----TKVIVSSHNYQLTPSMEDLGNLVARIQATGADIVKIATTALDITDVAR 130
Query: 172 IFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTY 229
+FQ++ H QVP I G+RGL+S +L KF G + +G+L+ V G PT++ L Y
Sbjct: 131 MFQIMVHSQVPFIGLVCGDRGLISHILCAKFGGYVTFGTLESRVVSASGQPTLKDLLYLY 190
Query: 230 KVEHIN----ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY 285
+ ++ DTKVFG+I KPV HSK PIL N F+ + NG+YV + VDDL F Y
Sbjct: 191 NLRQLSNKLTPDTKVFGIIGKPVSHSKSPILFNEVFKSIGLNGVYVFLLVDDLANFLRAY 250
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
SS +F GF V P+KEA +K CDEV P+A++I AVN I+RRP+DGKLIGYNTD ++TA
Sbjct: 251 SSTEFVGFGVTIPHKEAAIKCCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTDYVGAVTA 310
Query: 346 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
IED + RG NG+++ SPLA ++FV+ GA AG+ALA+GAK++GARVVI + F
Sbjct: 311 IEDGL--RGKHNGSSTTISPLASKLFVVIGADVAGKALAYGAKAKGARVVIANRTF 364
>gi|7488788|pir||S48698 3-dehydroquinate dehydratase (EC 4.2.1.10) / shikimate
5-dehydrogenase (EC 1.1.1.25) precursor - garden pea
(fragment)
Length = 325
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/328 (49%), Positives = 225/328 (68%), Gaps = 11/328 (3%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLP 66
KN T+IC P+M ++VE+++ ++ +AK GAD+VEIRLD ++ F P +DL + + LP
Sbjct: 2 KNATLICVPIMGETVEKMVVDIQKAKLNGADLVEIRLDSLSTFNPHQDLNTFIQQHHSLP 61
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQS 122
L YRP W GG Y+GDE++RL+AL LA +LGADYVD ELKVA +I GK ++
Sbjct: 62 FLFTYRPIWEGGKYDGDENRRLDALRLAVELGADYVDIELKVAHEFYDSIRGKMFNK--- 118
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP 182
T+ IVS + TPS EDLG LV+R+QATGADI+K+ + +IT++AR+FQ+L H QVP
Sbjct: 119 -TKVIVSSHNYQYTPSVEDLGDLVARIQATGADIVKIATTAVEITDVARMFQILVHSQVP 177
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKV 240
I +G+RGLVS++L KF G L +G+L+ V G PT++ L Y + +TKV
Sbjct: 178 FIGLVMGDRGLVSRVLCAKFGGYLTFGTLESGVVSAPGQPTIKDLLHLYNFRQLGPETKV 237
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
+G+I KPV HSK PIL N F+ V +NG++V + VDDL F TYSS DF GFSV P+K
Sbjct: 238 YGIIGKPVSHSKSPILFNEAFKTVGFNGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHK 297
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPS 328
E+ +K CDEV P+A++I AVN I+R P+
Sbjct: 298 ESALKCCDEVDPVAKSIGAVNXIVRXPT 325
>gi|125525997|gb|EAY74111.1| hypothetical protein OsI_01996 [Oryza sativa Indica Group]
Length = 455
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/327 (50%), Positives = 223/327 (68%), Gaps = 6/327 (1%)
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP W GG YEGD+ R EAL LA +LG +YVD ELKVA + Y S + IVS +
Sbjct: 4 RPNWEGGQYEGDDATRFEALRLAMELGVNYVDIELKVADKFISFIYGSKPEKCKLIVSAH 63
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TPS E+L LV+R+QA GADI+K+ + NDI +++++FQ++ HCQVP+I +GE+
Sbjct: 64 NYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQVPMIGLVMGEK 123
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
GL+S++LSPKF G L +GSL T V G PTVE L Y + I DTKV G+I+ PV
Sbjct: 124 GLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELLDIYNIRRIGPDTKVLGVIANPVK 183
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
SK P+LHN + V YN +Y+P+ D++ +F STYSSPDF+GFS P+K ++ C +
Sbjct: 184 QSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQCCHK 243
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
P+A++I A++TIIRRP DGKL+GYN D +I+AIED I G KN +PLAGR
Sbjct: 244 HDPVAKSIGAISTIIRRP-DGKLVGYNNDYIGAISAIEDGIGGPGSKNAAV---TPLAGR 299
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVVI 396
+ V+ GAGGAG+A+A+GAK +GAR+V+
Sbjct: 300 LLVVVGAGGAGKAIAYGAKEKGARIVV 326
>gi|449531177|ref|XP_004172564.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like, partial [Cucumis
sativus]
Length = 328
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
I++N+T+IC P+M++S+++++ ++ +A GAD+VEIRLD + F P +DL++++ + PL
Sbjct: 17 ISRNSTLICVPIMSESIDKMIVDVKKAGENGADIVEIRLDALKIFNPHEDLKLLIKESPL 76
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRP W GG Y+GDE++RL+ L LA LGADY+D EL+VA + + +
Sbjct: 77 PTLFTYRPNWEGGQYDGDENQRLDVLRLAMKLGADYIDVELQVAREFIDSIQQEKPNNFK 136
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + +TPS EDLG LV+ +QATGADI+K+ + DIT++AR+FQ+L + QVPII
Sbjct: 137 VIVSNHNYKKTPSLEDLGSLVAEIQATGADIVKIATTALDITDVARMFQVLVYSQVPIIG 196
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+ +RG + +LL PK+ G L +G+L+ V G PT++ L Y HI DTKVFG+
Sbjct: 197 LVMKDRGFICRLLCPKYGGYLTFGTLEEGIVSAPGQPTIKDLLNLYNFRHIGPDTKVFGI 256
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I PVG SK P L+N F+ V + IYVP+ VDD KF TYSS D GFSV P+KEAV
Sbjct: 257 IGNPVGDSKLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAV 316
Query: 304 MKFCDEVHPLAQ 315
K+CDEV +A+
Sbjct: 317 FKYCDEVDSVAK 328
>gi|226494502|ref|NP_001140289.1| uncharacterized protein LOC100272333 [Zea mays]
gi|194698862|gb|ACF83515.1| unknown [Zea mays]
gi|414878214|tpg|DAA55345.1| TPA: hypothetical protein ZEAMMB73_777854 [Zea mays]
Length = 532
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/357 (46%), Positives = 229/357 (64%), Gaps = 10/357 (2%)
Query: 52 PGKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVAS 110
P +DL ++L + + LPV++ YRP W GG Y G++ R EAL LA +LGA+YVD E KVA
Sbjct: 61 PCRDLPVLLAQPRSLPVIVTYRPNWEGGQYAGEDEPRFEALLLAMELGAEYVDVEFKVAD 120
Query: 111 NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIA 170
+ + I+S TPS +L LV++++ATGADI+K+ + DI + +
Sbjct: 121 KFMKYLSGKKPQNCKLIISAYDYKTTPSVHELLNLVAQIRATGADIVKIETTAADIVDTS 180
Query: 171 RIFQLLSHC---QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESL 225
R+FQ+L+HC QVPII E G +S+++ K+ G L + SL+ PTV L
Sbjct: 181 RMFQVLAHCHEKQVPIIGLVRKEHGFISRIICAKYGGYLTFASLENGKESTTEQPTVADL 240
Query: 226 RQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY 285
YK+ I DTKVFG+I PV HSK PI+ N FR V ++ +++P DDL +F T+
Sbjct: 241 INKYKIRQIGPDTKVFGIIGNPVSHSKSPIVQNQAFRSVGFDAVFLPFLSDDLVQFLYTF 300
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
S+PD+AGFS P+KE ++ CD+V P+A+ I A+NTIIRRP DGKL+GYNTD +I+A
Sbjct: 301 SAPDYAGFSCTMPHKETALRCCDDVDPIARDIGAINTIIRRP-DGKLVGYNTDYSGAISA 359
Query: 346 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402
IED I+ T S SPLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F
Sbjct: 360 IEDGIRA---SQPTDSITSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFA 413
>gi|224128596|ref|XP_002320371.1| predicted protein [Populus trichocarpa]
gi|222861144|gb|EEE98686.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/225 (69%), Positives = 184/225 (81%), Gaps = 9/225 (4%)
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTK 239
Q+P+IA +VG RGL+SQLL PKF G LVYGSL V G+PT+ SLRQ YK+E+INADTK
Sbjct: 1 QIPLIALAVGSRGLISQLLGPKFGGFLVYGSLSDKAVPGMPTLLSLRQIYKLEYINADTK 60
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
VFGLIS PVGHSKGP+LHNP FRH YNGIYVPM VDD+K+FF TY+S DFAGFSVG P+
Sbjct: 61 VFGLISNPVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPH 120
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA + CDEVHPLA++I AVNTI+RRP+DGKL+GYNTDC+ASI+AIEDA+ GT
Sbjct: 121 KEAAVGCCDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDAL------TGT 174
Query: 360 ASF---GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
SPL+G+ FVL GAGGAGRALAFGAKSRGARV+IF+ ++
Sbjct: 175 KLIILVPSPLSGKTFVLIGAGGAGRALAFGAKSRGARVIIFNRNY 219
>gi|194694678|gb|ACF81423.1| unknown [Zea mays]
Length = 428
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 164/312 (52%), Positives = 208/312 (66%), Gaps = 7/312 (2%)
Query: 96 DLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGAD 155
+LGA+YVD ELKVA + + IVS + TPS E+L LV+++QATGAD
Sbjct: 2 ELGAEYVDVELKVADKFMKLISGRKPDNCKLIVSSHNYETTPSSEELANLVAQIQATGAD 61
Query: 156 IIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSVGERGLVSQLLSPKFNGALVYGSLK 212
I+K+ + +I ++A++FQ+L HCQ VPII + +RG +S++L PK+ G L +GSLK
Sbjct: 62 IVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLVMNDRGFISRVLCPKYGGFLTFGSLK 121
Query: 213 G--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY 270
PT L Y + I DTKVFG+I KPVGHSK PILHN FR V +N +Y
Sbjct: 122 KGKESAPAQPTAADLINLYNIRQIGPDTKVFGIIGKPVGHSKSPILHNEAFRSVGFNAVY 181
Query: 271 VPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG 330
VP VDDL KF TYSSPDFAGFS P+KEA ++ CDEV P+A+ I AVNTI+RRP DG
Sbjct: 182 VPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAVRCCDEVDPVARDIGAVNTIVRRP-DG 240
Query: 331 KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR 390
KL+GYNTD +I+AIED IK T SPLAGR+FV+ GAGGAG+ALA+GAK +
Sbjct: 241 KLVGYNTDYVGAISAIEDGIKA-SESEPTDPDKSPLAGRLFVVIGAGGAGKALAYGAKEK 299
Query: 391 GARVVIFDIDFG 402
GARVVI + F
Sbjct: 300 GARVVIANRTFA 311
>gi|302842835|ref|XP_002952960.1| hypothetical protein VOLCADRAFT_82062 [Volvox carteri f.
nagariensis]
gi|300261671|gb|EFJ45882.1| hypothetical protein VOLCADRAFT_82062 [Volvox carteri f.
nagariensis]
Length = 564
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 240/403 (59%), Gaps = 23/403 (5%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
IC + A V++ ++ + +A A G D++E+RLD + +F P + L+ I + PLP ++ YR
Sbjct: 24 ICTSVTATKVDEFIAEIQEAAASGVDIIELRLDFLTDFDPEQHLQRITSSCPLPYIVTYR 83
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS-----GTRFI 127
P W GG Y+G E +RL L +A +GA YVD E K + + Q T+ I
Sbjct: 84 PVWEGGKYDGPEPERLAVLKMAALMGAPYVDVEFKASPYFFAGETGWSQGRAVPLSTKVI 143
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
+S + +TP L L S M+A GADI+KL NDIT+ AR+ LL P+IA S
Sbjct: 144 LSYHDFQQTPEPAVLDRLASAMRAAGADIVKLAAMANDITDAARMLDLLRKKDGPMIALS 203
Query: 188 VGERGLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLIS 245
+GE+G + +LL+ K+ G L + ++ + G P + L + +TKV+G+I
Sbjct: 204 MGEKGQIVRLLAAKYGGYLTFAAMSPERASAPGQPDIGKLAGLFGYRRQGPETKVYGIIG 263
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGFPYKEAVM 304
PV HSK P++HN F+HV ++G+YVP+ VDDL++F + + DFAGFSV P+KEA +
Sbjct: 264 NPVSHSKSPLIHNTAFQHVGFDGVYVPLLVDDLERFLTAFKDHEDFAGFSVTIPHKEAAL 323
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG- 363
+ EV P+A+ I AVNT++R+P DG G+NTD A+I+AIE + + G A+ G
Sbjct: 324 RLATEVDPVARQIGAVNTLVRQP-DGSFKGFNTDWLAAISAIEHGV---AGEPGRAAAGA 379
Query: 364 ----------SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
SPL G+ V+ GAGGAGRALAFGA ++GARVVI
Sbjct: 380 VEEAPVAGGKSPLQGKTVVVIGAGGAGRALAFGAATKGARVVI 422
>gi|159472414|ref|XP_001694346.1| dehydroquinate dehydratase [Chlamydomonas reinhardtii]
gi|158277009|gb|EDP02779.1| dehydroquinate dehydratase [Chlamydomonas reinhardtii]
Length = 554
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 217/368 (58%), Gaps = 10/368 (2%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
+ IC + A +VE L+ + +A A G D++E+RLD + +F P + LE I+ PLP ++
Sbjct: 35 SYICTSVTATTVESFLAEIQEAAASGVDIIELRLDFLTDFDPEQHLEKIIKACPLPYIVT 94
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG YEG E +RL L +A +GA YVD E K + + S T+ I+S
Sbjct: 95 YRPVWEGGKYEGPEPERLAVLKMAALMGAPYVDVEFKASPYFFADPHEVPLS-TKVILSY 153
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TP L L + M+ GADI+KL NDI + AR+ LL + P+IA S+GE
Sbjct: 154 HDFKQTPDAAVLNKLATAMRQAGADIVKLAAMANDIGDAARMLDLLRNKDGPMIALSMGE 213
Query: 191 RGLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RG + +LL+ K+ G L + ++ + G P + L + +A TKVFG+I PV
Sbjct: 214 RGQIVRLLAAKYGGHLTFAAMSPERASAPGQPDIGRLAGLFNYRKQSAATKVFGIIGNPV 273
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGFPYK--EAVMK 305
SK P++HN F+H+ ++G+YVP+ VDDL++F + + DFAGFSV P+K EA ++
Sbjct: 274 AQSKSPLIHNTAFQHIGFDGVYVPLLVDDLERFLAAFKDYDDFAGFSVTIPHKVREAALR 333
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
+V P+A I AVNT+IR+ +DG GYNTD EA+I+AIE + GT + SP
Sbjct: 334 AAKDVDPVAAQIGAVNTLIRQ-ADGSFKGYNTDWEAAISAIERGLAGNA---GTPAAESP 389
Query: 366 LAGRMFVL 373
L GR V+
Sbjct: 390 LKGRTVVV 397
>gi|356533611|ref|XP_003535355.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 455
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/400 (39%), Positives = 246/400 (61%), Gaps = 13/400 (3%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ +N+T ICA A+ VE+ + M +AK GAD+VE RLD + +F P + + ++ +PL
Sbjct: 17 VRRNSTPICASTTAEWVEEKVFEMVKAKELGADLVEARLDFLKDFHPAQHHQSLINNRPL 76
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKV--ASNILGKQYSSHQSG 123
P+LI YRP GG +GDE +R +AL A +LG+++VD + + +I GK+ S
Sbjct: 77 PILITYRPIXEGGESDGDESQRQDALRQAIELGSEFVDDDRAKGGSXSIGGKKPES---- 132
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL-----SH 178
+ IVS + TPS E++G L +R+QA+GAD++K+ + D T I +F +
Sbjct: 133 VKIIVSSHNLERTPSVEEIGNLAARIQASGADVVKIATTAFDNTXILNLFMKIFKKXXKK 192
Query: 179 CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINA 236
QVP+I ++ G+ +L KF G L +GS++ + G T++ L Y I
Sbjct: 193 KQVPMIGIAMRXEGIFVTVLCAKFGGFLTFGSVEAGAISAPGQXTIKELLDLYNFRQIGV 252
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
TKV G + P+ SK P L+N TF+ V ++G+Y+P+ VD++ F +TYSSPDF G++
Sbjct: 253 GTKVHGAVGNPISDSKSPHLYNATFKSVGFDGVYLPLLVDNVSDFLNTYSSPDFVGYNYT 312
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P KE ++ CDE+ P+A+AI A++ +I+RP+DGKL+G N D +I AIE+ + +
Sbjct: 313 IPPKENGLRCCDEIDPIAKAIGAISCMIKRPNDGKLLGNNFDYLGAIAAIEERLHLQDSN 372
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
+ S SPL G++FV+ GAGGAG+A+A+G K +GARVV+
Sbjct: 373 RRSISGCSPLCGKLFVVMGAGGAGKAIAYGGKEKGARVVV 412
>gi|255070969|ref|XP_002507566.1| dehydroquinate dehydratase [Micromonas sp. RCC299]
gi|226522841|gb|ACO68824.1| dehydroquinate dehydratase [Micromonas sp. RCC299]
Length = 517
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/395 (38%), Positives = 231/395 (58%), Gaps = 17/395 (4%)
Query: 18 MAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAG 77
MA+++E++ +A GAD+VE+R+D + +F +D+ ++L +P ++ YRP W G
Sbjct: 1 MAEALEEI----DEAIVAGADIVELRIDFLRDFIAARDVRVLLDACSVPCIVTYRPTWEG 56
Query: 78 GLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS--HQSGTRFIVSCNLDCE 135
G Y+GDE RL L A +LGA YVD EL+ A + + +S T+ I+S + +
Sbjct: 57 GQYKGDEQHRLSVLWTAVELGAAYVDCELRAAGHFFAAAPNGVRERSTTKIILSSHNYDD 116
Query: 136 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP----IIAYSVGER 191
PSE +L + ++ GADI+K+ V DIT+IAR+ LL+ + I +GE
Sbjct: 117 VPSEVELDEIHAQCVVAGADIVKIAAMVKDITQIARLENLLARAKSATGHKTIVLGMGEA 176
Query: 192 GLVSQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G VS+LL+ KF L +G+L+ G PT+ LR Y+++ + +TKV G+I P+
Sbjct: 177 GQVSRLLAAKFGSFLTFGALRSGAESAPGQPTLSQLRDIYRLQKQSTNTKVMGVIGNPIS 236
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST--YSSPDFAGFSVGFPYKEAVMKFC 307
SK P+LHN + + YVP+ V D++KF ST + S F GFSV P+KE+ + C
Sbjct: 237 QSKSPVLHNISLEAAGLDACYVPLLVSDIRKFLSTPLFVSDSFTGFSVTIPHKESAVMCC 296
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
+E+ P+A+ I AVNT++R P +GK GYNTD A++ AIE A + L
Sbjct: 297 EELDPVAKKIGAVNTLVRLP-NGKFKGYNTDYSAAVRAIERAYTSH-LDGDMRDSETILR 354
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF 401
G+ V+ GAGGAGR+LAFGA +GA +++I + F
Sbjct: 355 GKTIVVVGAGGAGRSLAFGAAFKGAGKIIIANRSF 389
>gi|386813870|ref|ZP_10101094.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403367|dbj|GAB63975.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 492
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 223/392 (56%), Gaps = 21/392 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++A ++E L ++ +A +E AD+VE+R+D I + +L+ +L PV++
Sbjct: 1 MICVPIIADNLEDALKDIAEA-SEVADIVELRIDYIKDL----NLKRLLKGCIKPVIVTN 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP GG + G E R+ L LA +L DY+D E + ++ T+ IVS +
Sbjct: 56 RPVREGGKFTGSEEDRISLLKLAVELQVDYIDVEHDSIQKV------NNTGKTKRIVSYH 109
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
+TP +DL + R++ +GADIIK+V N IT+ +I+QLL +P I++ +GE
Sbjct: 110 NFDKTP--DDLTGIFQRLKQSGADIIKIVPYANGITDNVKIYQLLQQVDMPTISFCMGEY 167
Query: 192 GLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G++S++L KF L + SL+ G ++ L TY V + T ++GLI PV
Sbjct: 168 GIISRILYKKFGSYLTFASLQSGKESAPGQVSIHELLNTYHVRRQDKHTSIYGLIGNPVS 227
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
HS P +HN F+ + ++ IYVP VD + F + D G+SV P+KE+VM D
Sbjct: 228 HSISPAIHNTLFKEMGFHNIYVPFKVDTIGNFIREFRGLDIKGYSVTIPHKESVMGHLDG 287
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ +A+ I AVNTI+ R DG+LIG+NTDCEA++ +ED +G A+ L G+
Sbjct: 288 IDQIAKKIGAVNTIVNR--DGRLIGFNTDCEAAVRVLEDI----NNVSGMAAKAGSLQGK 341
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
L GAGG RA+AFG K R A++ IF+ ++
Sbjct: 342 KVTLFGAGGVARAIAFGLKEREAQITIFNRNY 373
>gi|303272087|ref|XP_003055405.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463379|gb|EEH60657.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 493
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 162/390 (41%), Positives = 226/390 (57%), Gaps = 15/390 (3%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP-GKDLEIILTKKPLPVLIVYRPKW 75
++A +V + L+ + +A A GAD+VE+R+D I GKDL +L + P+P ++ YRP W
Sbjct: 1 VIAPTVAEALTEIDEAVAGGADIVELRVDFIPTLDADGKDLTAMLERCPVPCIVTYRPTW 60
Query: 76 AGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYS--SHQSGTRFIVSCNLD 133
GG Y G+E RL AL A +LGA YVD EL A S T+ I+S +
Sbjct: 61 EGGQYAGEEEPRLAALWKAVELGAAYVDCELLAAERFFAAAPPGIKDASATKIILSSHDY 120
Query: 134 CETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC---QVPIIAYSVGE 190
PS ++L + +R A GAD++K+ V DI ++ R+ LL + I +GE
Sbjct: 121 DAVPSYDELAEIRARCVAAGADVVKIAAMVKDIVDVTRLQTLLEDAAGSRQDTIVLGMGE 180
Query: 191 RGLVSQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
G VS+LL+ KF L +G+L+ G PT+ LR Y+V TKV G+I P+
Sbjct: 181 AGQVSRLLAAKFGSFLTFGALRAGAESAPGQPTLRQLRDLYRVPTQTRATKVMGVIGNPI 240
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFF--STYSSPDFAGFSVGFPYKEAVMKF 306
SK P LHNP+ + YVP+ V+D++ F +T+ D+ GFSV P+KEA ++
Sbjct: 241 AQSKSPALHNPSLAAAGVDACYVPLLVNDIEAFLKSATFGGDDYVGFSVTIPHKEAALRC 300
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
CDEV P+A I AVNT+++RP DG GYNTD A+I AIE A+ K GTAS G L
Sbjct: 301 CDEVDPVAAEIGAVNTLVKRP-DGTFKGYNTDYVAAIDAIEAAMNA---KRGTAS-GEVL 355
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ V+ GAGGAGR LAFGAK +GA V++
Sbjct: 356 RGKTVVVVGAGGAGRGLAFGAKFKGADVIV 385
>gi|145352721|ref|XP_001420686.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580921|gb|ABO98979.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 526
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 163/402 (40%), Positives = 236/402 (58%), Gaps = 22/402 (5%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP----GKDLEIILTKK 63
K TT + AP ++E L ++ A +GADVVE+R+D + + G +E ++
Sbjct: 10 KLTTSVIAP----NLELALRDVDDAVRKGADVVELRVDFLRDDAARGTLGDAIEALIKAS 65
Query: 64 PLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS---H 120
P+PV++ RP W GG +GDE RLEAL A + GA YVD E A + ++
Sbjct: 66 PVPVIVTNRPTWEGGQDDGDESARLEALWRAHECGAAYVDCEALAAERFFAAKPATATLR 125
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC- 179
T+ I+S + ETP++E L + ++ GADI+K+ N + ++AR+ +LL
Sbjct: 126 NGKTKIILSSHNYDETPNDEILAEIHAKCVRLGADIVKMASVCNAVEDVARLEKLLRTKG 185
Query: 180 -QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINA 236
++ I + E G VS+LL+ KF L +G+++ G P +E LR Y+V A
Sbjct: 186 REIETIVLGMSEHGQVSRLLAAKFGSFLTFGAIRRGEESAPGQPLLEELRDLYRVPTQTA 245
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST--YSSPDFAGFS 294
TKV G+I P+GHSK P LHNP + YVP+ V D+K F ++ + S DF GFS
Sbjct: 246 ATKVMGVIGNPIGHSKSPALHNPCLAAAGVDACYVPLLVKDIKTFLASPLFGSKDFVGFS 305
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+KE ++ C EV P+A+ I AVNT++R+P DG L GYNTD A+I AIE+A+++
Sbjct: 306 VTIPHKEDALECCAEVDPVAKQIGAVNTLVRQP-DGSLKGYNTDYVAAIEAIENAMEK-- 362
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
K G A+ S LAG+ V+ GAGGAG+ALAFGAK +GA VVI
Sbjct: 363 -KTGVAAAKS-LAGKTVVVIGAGGAGKALAFGAKFKGANVVI 402
>gi|91200495|emb|CAJ73543.1| similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Candidatus Kuenenia stuttgartiensis]
Length = 499
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 223/392 (56%), Gaps = 16/392 (4%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N MIC P++A + + +M + ++ AD VE+R+D I++ +L IL K PV
Sbjct: 2 QNKPMICVPIVANNNNDAIHDM-ECASKIADAVELRIDYIHDL----NLRQILGKCTKPV 56
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQ-SGTRF 126
++ RP GG + G E +RL+ L A L ADYVD E N+ + S T+
Sbjct: 57 IVTNRPVREGGKFRGTEEERLQLLKQAIQLQADYVDIEHDSIRNVKKNGNALFAASKTKI 116
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
IVS + ETP E+L + + + +GADI+K+V N IT+ +I+QLL ++PII++
Sbjct: 117 IVSYHNFRETP--ENLSEIYNTLFQSGADIVKIVTHANSITDNIKIYQLLQQSKIPIISF 174
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLI 244
+GE G++S++L F L + SL+ G +E L Y +++ N T V+GLI
Sbjct: 175 CMGEYGIISRILYKIFGSYLTFASLQKGKESAPGQINIEELLNRYNIKNQNKHTAVYGLI 234
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
PV HS P++HN F+ + N +YVP VD++ +F S + + +G+SV P+KE+++
Sbjct: 235 GNPVSHSISPVIHNALFKEIGMNCVYVPFKVDEIGRFISEFKKLNISGYSVTIPHKESII 294
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ D+ P+A+ I AVNT++ + + +LIG+NTD EA++T + + G+ A F +
Sbjct: 295 NYLDDADPIAKKIGAVNTVVNK--NNRLIGFNTDLEAAVTVLAEVANVSGHTAADACFKN 352
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
+ + GAGG RA+AFG K GA + +
Sbjct: 353 ----KHVTIIGAGGVARAIAFGLKMYGADITL 380
>gi|326526517|dbj|BAJ97275.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/266 (46%), Positives = 167/266 (62%), Gaps = 2/266 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
++ T++C PL+ ++VE++ + A A G D+VEIRLD I F+P +DL +L PLPV
Sbjct: 6 EDMTLLCVPLVGRTVEEMKIDAAAAAAAGGDLVEIRLDYIEGFRPREDLPRLLHSCPLPV 65
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L+ YRP W GG YEGD+ R E L LA +LG DYVD ELKVA + + + I
Sbjct: 66 LVTYRPNWEGGRYEGDDATRFETLSLAMELGVDYVDIELKVADKFVDFLSGTKPDKCKLI 125
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS E+L LV+R+Q GADI+K+ + DI +++R+FQ++ HCQVP+I
Sbjct: 126 VSSHNYESTPSCEELANLVARIQEVGADIVKVATTATDIVDVSRMFQVMVHCQVPMIGLV 185
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S++LSPKF G L +G L T G PT+E L Y + I DTKV GLI+
Sbjct: 186 MSERGLMSRVLSPKFGGYLTFGILDATKTSAPGQPTLEELLDIYNIRCIGPDTKVLGLIA 245
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV 271
PV SK PILHN + V YN + V
Sbjct: 246 NPVKQSKSPILHNKCLQSVGYNAMQV 271
>gi|192758420|gb|ACF05190.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Spirogyra
varians]
Length = 520
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 239/398 (60%), Gaps = 20/398 (5%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVL 68
N ++CA L ++VE++ S + ++K+EGAD VEIRLD I+ F+ L+ + + P ++
Sbjct: 4 NPCIVCAELTGKNVEEIKSQICRSKSEGADAVEIRLDLIHGFE----LDQLSSLIPSDII 59
Query: 69 IV--YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
V YR K E E +L ALH A +LG+D+V+ + ++A K +S +
Sbjct: 60 SVVSYRSK------EVSEDLKLAALHKAVELGSDFVEVDYELAEKFFSKPLGGAKS--KI 111
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
IV+ TP ++L L ++++ T ADI+K++ + NDI++ A+IF+ L + P I++
Sbjct: 112 IVASFNYESTPPVDELIALAAKLKETKADIVKIITAANDISDTAKIFKFLDTTKTPTISF 171
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLI 244
++ RG +S+LL+PKFN L Y L K LPTV Y+++ + +KVFG++
Sbjct: 172 ALAARGEISRLLAPKFNSFLTYAYLDDKSGSAQELPTVYDAVHVYQIKRLTRQSKVFGVV 231
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF-AGFSVGFPYKEAV 303
P+ S+G +L+N N++GIY+P VDD++ FF T++ PD AG SV P+++
Sbjct: 232 GNPISQSRGYLLYNAGMIAKNFDGIYLPFLVDDVRLFFKTFNMPDLIAGTSVTAPHRQIA 291
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
M DEV P A+AI AV+ I+RRP DG +IGYN D A+I A+E + E + G A
Sbjct: 292 MDCIDEVDPAAKAIGAVSAILRRP-DGTMIGYNMDWGAAIYAVEQGLLE--HSGGKAEGK 348
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
PL G + VLAGAGGAGR LA+G K +G +++ D+D
Sbjct: 349 GPLEGVLLVLAGAGGAGRGLAYGVKEKGGYLLVADLDL 386
>gi|308810206|ref|XP_003082412.1| putative dehydroquinate dehydratase (ISS) [Ostreococcus tauri]
gi|116060880|emb|CAL57358.1| putative dehydroquinate dehydratase (ISS) [Ostreococcus tauri]
Length = 809
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 238/405 (58%), Gaps = 32/405 (7%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKD-LEIILTKKPLP 66
K TT + AP SV L ++ +A GADVVE+R+D + + G++ E +L K P
Sbjct: 298 KLTTSVVAP----SVPIALLDVEEAIELGADVVELRMDFLE--RRGREATEALLRKCERP 351
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG--- 123
++ RP W GG +GDE +RL++L A +LGA YVD EL A + S +SG
Sbjct: 352 AIVTNRPIWEGGRNDGDEDERLDSLWEAYELGAAYVDCELLAAERFFARAPDSFKSGGNG 411
Query: 124 -TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV- 181
T+ I+S + ETPS+ +L + + A GADI+K+ +I ++ R+ +LL
Sbjct: 412 KTKIILSSHNYEETPSDVELAKIHAACVAAGADIVKIACVCKEIEDVERLERLLRERGGE 471
Query: 182 -PIIAYSVGERGLVSQLLSPKFNGALVYGSLK-------GTPVLGLPTVESLRQTYKVEH 233
IA + E G VS+LL+ KF L +G+++ G P+LG LR Y+V
Sbjct: 472 KETIALGMSEHGQVSRLLAAKFGSYLTFGAIRRGAESAPGQPLLG-----ELRDMYRVPT 526
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST--YSSPDFA 291
+ TKV G+I P+GHSK P LHNP N + YVP+ V D+K+F ++ + S DF
Sbjct: 527 QTSSTKVMGVIGNPIGHSKSPALHNPCLAAANVDACYVPLLVKDIKQFLASPLFGSEDFV 586
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+KEA ++ C EV P+A+ I AVNT++R+P DG L GYNTD A+I AIE A++
Sbjct: 587 GFSVTIPHKEAALEACAEVDPVAKQIGAVNTLVRQP-DGSLKGYNTDYAAAIDAIEVAME 645
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
+ K GT + L G+ V+ GAGGAG+ALAFGAK +GA V+I
Sbjct: 646 K---KTGTPA-AKALEGKTVVVIGAGGAGKALAFGAKFKGANVII 686
>gi|262181541|gb|ACY29661.1| 3-dehydroquinate dehydratase 01 [Vitis vinifera]
Length = 222
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 148/210 (70%), Gaps = 3/210 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
++KN+T+IC P+M +++E+++ +M +AK GAD+VE+RLD + F P +DLE+++ K PL
Sbjct: 6 MSKNSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPL 65
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRPKW GG YEGDE+ R +AL LA +LGADYVD ELKVA + + +
Sbjct: 66 PTLFTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFK 125
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VP 182
IVS + TPS EDLG LV +QATGADI+K+ + +IT++ARIFQ+ H Q VP
Sbjct: 126 VIVSSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVSSVP 185
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLK 212
+I +GERGL+S++L PKF+G L +GSL+
Sbjct: 186 VIGLVMGERGLISRILCPKFSGYLTFGSLE 215
>gi|307109521|gb|EFN57759.1| hypothetical protein CHLNCDRAFT_143054 [Chlorella variabilis]
Length = 375
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 163/281 (58%), Gaps = 4/281 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T +C L+A +VE +L+ +A+ GAD+VE+RLD + F P DL +L PLP ++
Sbjct: 21 THLCTSLVAPTVEGMLAEAQEAEQNGADIVELRLDYLQQFAPEADLSRLLQACPLPAIVT 80
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG Y+G E +RL AL LA GA YVD ELKVA + +G IVS
Sbjct: 81 YRPTWEGGKYDGPEPQRLAALRLAALSGAAYVDVELKVAPAFFAG--TQPWAGGAVIVSS 138
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ T SEE+L LV R GADI+K NDIT+ R+ +L C VP IA ++GE
Sbjct: 139 HDYERTASEEELMALVERCHGAGADIVKFATMANDITDAHRVLSVLRRCPVPCIALAMGE 198
Query: 191 RGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RG +S+LL+PK+ G L +G+L G PT++ L Y ++ DT V G++ PV
Sbjct: 199 RGQISRLLAPKYGGFLTFGALSPDRASAPGQPTLQQLSGMYGLKQQRRDTAVLGIVGNPV 258
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD 289
HS+ P +HN R NG+YVP+ VDD+ F +T++ D
Sbjct: 259 SHSRSPAIHNAALRQAGLNGVYVPLLVDDMPSFLATFTGED 299
>gi|384250424|gb|EIE23903.1| shikimate 5-dehydrogenase, partial [Coccomyxa subellipsoidea C-169]
Length = 514
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 195/351 (55%), Gaps = 20/351 (5%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINN---FQPGKDLEIIL---TKKPLPVLIV 70
+ A +V ++ + + GADVVE+R+D + + F P L +L LP ++
Sbjct: 2 VTADTVNGAIAEIREVADFGADVVELRMDFLKDIDLFNPAAFLNPLLDACNAVRLPAIVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG------- 123
+RP W GG Y+G E RL L A LGA YVD E A+ + +G
Sbjct: 62 FRPNWEGGQYDGPEPLRLAVLKYAAVLGAPYVDVEYLAANFFFASECMHAGTGEGEVPLT 121
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQL--LSHCQV 181
T+ I+S + ETPS+E L LV M GADI K+ + I + AR+ L S +
Sbjct: 122 TKVILSHHDYDETPSDEILEALVKEMFKGGADIAKIATTAQRIEDSARMLALPGKSSGER 181
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINADTK 239
P+IA ++GE+GL S++L+PKF G L +G+L G PTV LRQ Y++++ ++ TK
Sbjct: 182 PVIALAMGEKGLTSRVLAPKFGGYLTFGALSPAKASAPGQPTVTELRQLYRLQNQSSATK 241
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
VFG++ PV HS+ P LHN + +YVP+ VD+L+ F Y P F+G S+ P+
Sbjct: 242 VFGIVGNPVSHSRSPALHNAALAAAGLDAVYVPLLVDELRPFLDAY--PSFSGISITIPH 299
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
K A ++ D+ P+A I A NT++R+P G L YNTD A+I+A+E A+
Sbjct: 300 KLAALECADDADPVAARIGAANTLVRQPG-GGLKAYNTDWSAAISAVEAAL 349
>gi|357512135|ref|XP_003626356.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
gi|355501371|gb|AES82574.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
Length = 224
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 141/241 (58%), Gaps = 46/241 (19%)
Query: 119 SHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSH 178
+H + I SC +D TP E+L LV+ MQATG DIIKLV DITEI RIF L +
Sbjct: 8 NHNIHGKIIASCFVDGITPPTEELLQLVALMQATGTDIIKLVAHAADITEITRIFSLFPY 67
Query: 179 CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT 238
CQVP+IAYS+GE GL+SQ L PKF G V GSL P+ GLP++ SL++ YK+EH+NA+T
Sbjct: 68 CQVPLIAYSIGESGLISQFLCPKFGGFFVCGSLARNPIPGLPSLHSLQEAYKLEHVNANT 127
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
+VFGLIS S A
Sbjct: 128 EVFGLIS----------------------------------------SQNQLATAK---- 143
Query: 299 YKEAVMKFCDEVHPLAQAI--AAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
YKE V++FCDE+HPLAQ + AVNTI R P DGKL+GYNTDCEASITAIEDA+ Y
Sbjct: 144 YKEEVLRFCDEIHPLAQLVLYRAVNTITREPRDGKLVGYNTDCEASITAIEDALIGNSYY 203
Query: 357 N 357
N
Sbjct: 204 N 204
>gi|451981182|ref|ZP_21929555.1| Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Nitrospina gracilis 3/211]
gi|451761592|emb|CCQ90808.1| Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Nitrospina gracilis 3/211]
Length = 495
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 213/393 (54%), Gaps = 35/393 (8%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL-EIILTKKPLPVLIV 70
MIC P++ ++++ L ++ A + AD +E RLD I PG DL +I P ++
Sbjct: 1 MICVPIVGPTMDRALEDI-DACRKVADFIEFRLDLI----PGHDLPRLIEAAGDTPYIVT 55
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
R K GG + G E +R+ + A +LGA Y+D E +L + ++ ++ I+S
Sbjct: 56 NRAKMDGGQFPGTEEERVAVIKQAIELGAMYIDIETSTPPELL-RSVLENKGKSKAILSH 114
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC---QVPIIAYS 187
+ T + D Y + M AD++K++ D+++ R+ QLLS +V +IA+
Sbjct: 115 HDFTRTDDKVDALYEL--MTQMPADVLKIITYAQDLSDNLRLLQLLSRARRDEVKLIAFC 172
Query: 188 VGERGLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGL 243
+GE+G VS++LSP + G L +GSL + P G +L+ Y+V +N D+K+FG+
Sbjct: 173 MGEKGEVSRILSPMYGGWLTFGSLDRGKESAP--GQIPATTLKHIYRVNELNLDSKIFGV 230
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I PV S G ++HN F +N +YVP +V L +FF+TY + F G SV P+KE +
Sbjct: 231 IGDPVNKSMGYLIHNRAFSELNLPNVYVPFWVKSLTRFFNTYQA-YFTGLSVTMPFKEDI 289
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
MK + + PLAQ I AVNT++R +D +GYNTD +++A+ A+ E
Sbjct: 290 MKHMNRIDPLAQKIGAVNTVVREGND--WVGYNTDVTGALSALT-AVTE----------- 335
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
L G ++ GAGG +A+ G +GA + +
Sbjct: 336 --LKGTRVLIIGAGGTAKAIGHGVTEQGAALTL 366
>gi|449017210|dbj|BAM80612.1| fusion protein of 3-dehydroquinate dehydratase and shikimate
5-dehydrogenase [Cyanidioschyzon merolae strain 10D]
Length = 542
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 199/376 (52%), Gaps = 22/376 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
+IC + A S E+ +++MY+A+ GAD+VE R D + G+ E ++ ++PLP++ Y
Sbjct: 11 LICTSITANSAEEAIADMYEARRAGADLVEFRADYLAE---GESWERVVDQRPLPMVFTY 67
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFEL------KVASNILGKQYSSHQSGTR 125
RP GGL + ++H+R+ L A G +YVD EL ++ ++ Q + R
Sbjct: 68 RPVCEGGLSDMNDHERVRLLQRAVQHGVEYVDVELANMDLFRMPESV---QLQDASTRPR 124
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--QVPI 183
IVS + +E +L + + + ATGADI K+ +D+ + AR+F LL P
Sbjct: 125 LIVSYHSFTRPLTEAELAEIYTAIVATGADICKIAMMCHDLCDNARLFALLKRTAGSKPT 184
Query: 184 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKV 240
IA +GE G +S++L+ KF A++ + P +E L Y+ +N DT V
Sbjct: 185 IAIGMGEYGQISRVLAAKFGPAMLTFTTLSEARASAPGQFRIEELIDHYRFHSLNPDTTV 244
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSVGF 297
+G+I PV HS P +HN F N +Y+P V D L+KF T + G SV
Sbjct: 245 YGVIGAPVRHSMSPRIHNHAFGLCRLNHVYLPFLVQDGSKLQKFLDTMTQFGLRGASVTI 304
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K+ +M+ DE+ +A+ I AVNTI+ P G+ GYNTD +A++ A+ + + G +
Sbjct: 305 PHKQRIMECLDELDDVAKQIGAVNTIVVDPLTGRRKGYNTDWQAAVDAVSETLMP-GIEQ 363
Query: 358 GTASFGSPLAGRMFVL 373
G A + L R VL
Sbjct: 364 GQARL-TALQRRHVVL 378
>gi|452825796|gb|EME32791.1| bifunctional 3-hydroquinate dehydratase/shikimate 5-dehydrogenase
[Galdieria sulphuraria]
Length = 521
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 200/368 (54%), Gaps = 15/368 (4%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
++C P+ AQ V++ + +A+ GAD+VE+RLD +++ + +DL + +P +
Sbjct: 5 LLCVPITAQYVKEAFEQIKEAQRLGADLVELRLDLLDSTEEWEDL---VKHCFVPKIATC 61
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP W GG Y G E +RL L A LG +YVD EL+ + K + H T+ I+S +
Sbjct: 62 RPHWEGGNYNGSESRRLSILSEACKLGCEYVDVELEAITR-FEKPSNCH---TKLILSRH 117
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
L S ++L S M + AD+IK+ +++I + +F ++ +VP IA +GE
Sbjct: 118 LWNRPFSHQELANTYSSMLSNQADVIKVACKIDNIEQCEILFHFIAASKVPCIALGMGEA 177
Query: 192 GLVSQLLSPKFNGALVYGSL-KGTPVL-GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G +S++L+ ++ L + SL KG G + Q Y+++ +++ TK++G++ PV
Sbjct: 178 GQISRILAGRYGAFLTFASLSKGKESAPGQIELNDCIQMYRLKSLSSSTKLYGVVGNPVA 237
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
HS P +HN F ++ + +Y P+ V+D + + F G SV P+KE ++ DE
Sbjct: 238 HSMSPAIHNLAFASLSLDCVYCPLAVEDFGSCWKMLNEMGFMGLSVTIPHKETAKRYVDE 297
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA-IKERG---YKNGTASFGSP 365
+ LA I A+NT+++ K GYNTDC A+++AIED I +R + T SF +
Sbjct: 298 LDGLALKIGAINTMVKLERGWK--GYNTDCLAAVSAIEDGLIAQRSSSELSHRTNSFSTQ 355
Query: 366 LAGRMFVL 373
+ VL
Sbjct: 356 AGAKPLVL 363
>gi|283781777|ref|YP_003372532.1| shikimate 5-dehydrogenase [Pirellula staleyi DSM 6068]
gi|283440230|gb|ADB18672.1| shikimate 5-dehydrogenase [Pirellula staleyi DSM 6068]
Length = 495
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 194/367 (52%), Gaps = 28/367 (7%)
Query: 36 GADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAE 95
GA +VE+RLD I + +L +L ++P PV+I R + GG + E +R L A
Sbjct: 26 GAQLVELRLDYIMS---DVNLRRLLPERPTPVVITVRRQRDGGRWSRSEDQRQVLLRQAI 82
Query: 96 DLGADYVDFELKVASNI--LGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATG 153
G +YVD E +A +I GK T+ IVS + ETP E+L L RM
Sbjct: 83 ASGVEYVDLEEDIAGSIPRFGK--------TKRIVSYHNFQETP--ENLAALHERMSKLD 132
Query: 154 ADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKG 213
ADI+K+ + ++ R+ QL+ ++P +A ++GE G S++L KF L Y +
Sbjct: 133 ADIVKIATMAHTPSDTTRLVQLMKGAKIPTVAIAMGEIGTPSRILGGKFGSPLTYAAFSS 192
Query: 214 TPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV 271
L G + E +R Y + INADT+VFG+++ PVGHS P+LHN FR ++ N +Y+
Sbjct: 193 DRELAPGQLSYEQMRAVYHYDDINADTEVFGVVADPVGHSMSPLLHNAAFRALSMNRVYL 252
Query: 272 PMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSD 329
P+ V + L KF G SV P+KE V++ + IAA NT+I + +
Sbjct: 253 PLRVPREHLAKFLQDCPELGIKGLSVTIPHKEEVIQHLVKTDDATTEIAACNTVIWK--E 310
Query: 330 GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
GK +GYNTD AS+ +I+ G S LAG+ +L GAGG +A+A G +
Sbjct: 311 GKPVGYNTDYRASMASIDRLF-------GGDEKQSGLAGKTALLLGAGGVSKAIACGLRR 363
Query: 390 RGARVVI 396
RG VVI
Sbjct: 364 RGCDVVI 370
>gi|115436644|ref|NP_001043080.1| Os01g0375500 [Oryza sativa Japonica Group]
gi|113532611|dbj|BAF04994.1| Os01g0375500 [Oryza sativa Japonica Group]
gi|222618473|gb|EEE54605.1| hypothetical protein OsJ_01836 [Oryza sativa Japonica Group]
Length = 321
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 146/211 (69%), Gaps = 6/211 (2%)
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+GE+GL+S++LSPKF G L +GSL T V G PTVE L Y + I DTKV G+I+
Sbjct: 1 MGEKGLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIYDIRRIGPDTKVLGVIA 60
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
PV SK P+LHN + V YN +Y+P+ D++ +F STYSSPDF+GFS P+K ++
Sbjct: 61 NPVKQSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQ 120
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
C E P+A++I A++TIIRRP DGKL+GYN D +I AIED I G KN +P
Sbjct: 121 CCHEHDPVAKSIGAISTIIRRP-DGKLLGYNNDYIGAICAIEDGIGGPGSKNAAV---TP 176
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
LAGR+ V+ GAGGAG+A+A+GAK +GAR+V+
Sbjct: 177 LAGRLLVVVGAGGAGKAIAYGAKEKGARIVV 207
>gi|320102191|ref|YP_004177782.1| shikimate 5-dehydrogenase [Isosphaera pallida ATCC 43644]
gi|319749473|gb|ADV61233.1| shikimate 5-dehydrogenase [Isosphaera pallida ATCC 43644]
Length = 527
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 190/390 (48%), Gaps = 25/390 (6%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
IC L ++ A GA +VE+RLDC+ DL+ IL + P ++ R
Sbjct: 4 ICVILGRGRHAALIQEWKDAADAGAQLVELRLDCLRR---DIDLKRILANRYSPCVVTIR 60
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGKQYSSHQSGTRFIVSC 130
GG++ DE +R L A +G DYVD E +A I GK + I+S
Sbjct: 61 RGRDGGIWRQDEERRQRLLREAIVMGVDYVDIEADIAKEIRRFGK--------VKRIISY 112
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ ETP E L ++ +M ADI+K+ I + A + + S VP IA ++GE
Sbjct: 113 HNFKETPKE--LPDIIQKMATLDADIVKVATIATSIQDAAFVLKTASEAPVPTIAIAMGE 170
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
G +++L K+ L Y S GLP L++ Y+ E I++ T+V+G+I PV
Sbjct: 171 VGFFTRILGAKYGAPLTYASFNPDRSFAPGLPNFRDLKRDYRFEKIDSATEVYGVIGDPV 230
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
S P++HN F H N +YVP V + L FF + G SV P+KEA+ +
Sbjct: 231 AQSLSPMVHNAIFEHYGQNKVYVPFKVAEGKLPTFFESLDFLKLKGLSVTIPHKEAIRQH 290
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
DE + + + NT+ RP DG +G+NTD A I +EDA+ G N SPL
Sbjct: 291 LDEEDDIVETTGSCNTVEIRP-DGTRVGHNTDYPAVIETLEDALG--GRPNPAL---SPL 344
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ +L GAGG R++A+ GA V I
Sbjct: 345 EGKQALLVGAGGVARSIAYALTRHGAGVTI 374
>gi|32474293|ref|NP_867287.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Rhodopirellula baltica SH 1]
gi|417304128|ref|ZP_12091163.1| shikimate 5-dehydrogenase [Rhodopirellula baltica WH47]
gi|32444831|emb|CAD74833.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Rhodopirellula baltica SH 1]
gi|327539589|gb|EGF26198.1| shikimate 5-dehydrogenase [Rhodopirellula baltica WH47]
Length = 496
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 192/390 (49%), Gaps = 25/390 (6%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC L +++++ +GA +VE+RLD I+ DL+ +L +P PV+
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISR---AVDLKRLLNDRPGPVVATV 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TP E+L L M A ADI+K+ N ++ R+ L + ++P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 366
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ ++ GAGG RA+A+G + R V I
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTI 370
>gi|449134129|ref|ZP_21769633.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula europaea 6C]
gi|448887232|gb|EMB17617.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula europaea 6C]
Length = 496
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 192/390 (49%), Gaps = 25/390 (6%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC L +++++ +GA +VE+RLD I+ DL+ +L +P PV+
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISR---AVDLKRLLNDRPGPVVATV 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TP E+L L M A ADI+K+ N ++ R+ L + ++P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 366
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ ++ GAGG RA+A+G + R V I
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTI 370
>gi|440716706|ref|ZP_20897210.1| protein containing Quinate/shikimate 5-dehydrogenase domain protein
[Rhodopirellula baltica SWK14]
gi|436438203|gb|ELP31763.1| protein containing Quinate/shikimate 5-dehydrogenase domain protein
[Rhodopirellula baltica SWK14]
Length = 496
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 192/390 (49%), Gaps = 25/390 (6%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC L +++++ +GA +VE+RLD I+ DL+ +L +P PV+
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISR---AVDLKRLLNDRPGPVVATV 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TP E+L L M A ADI+K+ N ++ R+ L + ++P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 366
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ ++ GAGG RA+A+G + R V I
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTI 370
>gi|421613663|ref|ZP_16054736.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula baltica SH28]
gi|408495622|gb|EKK00208.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula baltica SH28]
Length = 496
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 191/390 (48%), Gaps = 25/390 (6%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC L +++++ +GA +VE+RLD I+ DL+ +L +P PV+
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISR---AVDLKRLLNDRPGPVVATV 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TP E+L L M A ADI+K+ N ++ R+ L + +P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNANIPTIGICMGEI 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 366
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ ++ GAGG RA+A+G + R V I
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTI 370
>gi|430743501|ref|YP_007202630.1| shikimate 5-dehydrogenase [Singulisphaera acidiphila DSM 18658]
gi|430015221|gb|AGA26935.1| shikimate 5-dehydrogenase [Singulisphaera acidiphila DSM 18658]
Length = 497
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 200/389 (51%), Gaps = 22/389 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC L + +A A G ++VE+RLDC+ +P DL+ IL +P P++
Sbjct: 1 MICVTLGRGRHASLAEEWKEAAAAGVELVELRLDCLRR-EP--DLKRILANRPTPLVFTI 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R GG++ G E +R + L A LG DYVD E+ +A I +++ T+ IVS +
Sbjct: 58 RRGVDGGIWRGSEDRRQQLLREAIALGVDYVDLEMDIAPKI--RRFGK----TKRIVSYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
+TP+E L + + AD++K+ + + R+ L + VP + ++GE
Sbjct: 112 NLKKTPAE--LIEIAEQCDEMDADVVKIATKAESLADALRVLSLGTRAVVPTVTIAMGEL 169
Query: 192 GLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G +++L K+ Y + + T G+PT + L+ Y + INA+T+V+ +I P+
Sbjct: 170 GFFTRVLGAKYKAPFTYAGINPERTFAPGMPTFQVLKNDYAYDMINAETEVYAVIGDPIE 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
S P +HN FRH+ N + VP+ + L+ + GFSV P+KE ++K
Sbjct: 230 QSLSPAIHNAAFRHLGLNKVLVPLLIPAGTLEASLKELEVLNIQGFSVTIPHKEELVKLL 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
D+ + + NT++ + GK IG+NTD A++ +E + G K G A SPL
Sbjct: 290 DQKDGAVERTGSCNTLVFQ--KGKKIGHNTDYRAAMDTLEAGMG--GLKEGGA---SPLM 342
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGARVVI 396
+ ++ GAGGA R+++FG RGA V I
Sbjct: 343 DKQVLILGAGGAARSISFGCSRRGASVTI 371
>gi|384247564|gb|EIE21050.1| aldolase [Coccomyxa subellipsoidea C-169]
Length = 528
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 214/400 (53%), Gaps = 24/400 (6%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINN---FQPGKDLEIIL---TKKPLPVLIV 70
+ A +V+ L+ + +A GAD+VE+RLD + + P LE +L LP L+
Sbjct: 4 VTADTVDGALAEIGEAAHLGADLVELRLDFLTDIDLLDPTPMLERMLGACETALLPALVT 63
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+RP W GG Y G + RL L A GA Y+D E A + + S T I+S
Sbjct: 64 FRPMWEGGQYSGPDLPRLAVLKAAAGAGAQYIDVEHLAAGSFFSSE-GEVPSSTAVIISH 122
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP----IIAY 186
+ ETPS+E L LV M GADI K+ + + + AR+ L + P +IA
Sbjct: 123 HNYSETPSDEALEALVEDMFDEGADIAKIATTAKCVEDSARMLALPG--KAPGGWLVIAL 180
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLI 244
++GE GL ++LL+PKF G L++G+L + G T+ LR+ Y+V DTKVFG++
Sbjct: 181 AMGEAGLPTRLLAPKFGGYLIFGALSAEESSATGQSTIAELRRLYRVHSQTEDTKVFGIV 240
Query: 245 SKPVGHSKGP----ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
P +GP +LHN + IYVP+ DDL+ + P F+GF + P++
Sbjct: 241 DSPAAAVRGPPWSAVLHNAALAAAGMDTIYVPLCADDLRSCLDAF--PCFSGFCLTAPHQ 298
Query: 301 E-AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
A ++ DE A I A +T ++R +DG+L YNT+ A+++A+E A+ G+
Sbjct: 299 VLAALECADEADRSAARIGAADT-LQRQTDGRLQAYNTEWAAAVSALEAALGGAWCNAGS 357
Query: 360 ASFG-SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
G S L G+ V+ GAGGAGRALAFG +GARV++ D
Sbjct: 358 PQKGESALRGKCVVVVGAGGAGRALAFGVVEKGARVIVCD 397
>gi|262181533|gb|ACY29657.1| 3-dehydroquinate dehydratase 02 [Vitis vinifera]
Length = 187
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 121/185 (65%), Gaps = 2/185 (1%)
Query: 96 DLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGAD 155
+LGADYVD ELKVA + + + IVS + TPS EDLG LV +QATGAD
Sbjct: 2 ELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGNLVVSIQATGAD 61
Query: 156 IIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTP 215
I+K+ + +IT++ARIFQ+ H QVP+I +GERGL+S++L PKF+G L +GSL+
Sbjct: 62 IVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGI 121
Query: 216 VL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM 273
V G PT++ L Y + DTKVFG+I KPV HSK P L+N F+ V +NG+YV +
Sbjct: 122 VSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHL 181
Query: 274 FVDDL 278
VDD+
Sbjct: 182 LVDDI 186
>gi|87311736|ref|ZP_01093851.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Blastopirellula marina DSM 3645]
gi|87285520|gb|EAQ77439.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Blastopirellula marina DSM 3645]
Length = 495
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 197/392 (50%), Gaps = 30/392 (7%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC + + +++ G +VE+RLD IN L+ +L +P PVL+
Sbjct: 1 MICVSIGRGRHKHIIAEHRHLVDLGVKLVELRLDYINGT---IKLKRLLNDRPGPVLVTC 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R + GG + G E +R L A GADYVD E +A+NI +Y + T+ I+S +
Sbjct: 58 RREQDGGRWAGMEAERQMVLRTAIVDGADYVDIEEDIAANI--PRYGT----TKRIISYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
ETP+ D+ + RM DI+KL N + R+ +L VP IA +G+
Sbjct: 112 NFRETPA--DIEEIHERMCKLDPDIVKLATMANSPHDNIRMLKLAQRNNVPTIALCMGDM 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G +++L K+ + Y + L G + +R+ Y + INA+T+++G+I+ P+G
Sbjct: 170 GTPTRILGAKYGVPITYSTYSNERTLAPGQIGYQQMREVYGYDQINAETEIYGVIADPIG 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD-----FAGFSVGFPYKEAVM 304
HS P LHN FR N Y+P V ++ +++ D G SV P+KE ++
Sbjct: 230 HSLSPQLHNACFRDQGSNRCYLPFRVP--REHLASFIQEDCPALEIKGLSVTIPHKETIV 287
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ + + Q I A NT++ +G G+N+DC+A++ ++ A+ + +
Sbjct: 288 RMIKKPNAAVQGIGAANTVLF--DEGGPSGFNSDCDAALASLSTALPQ--------DVAN 337
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
P + ++ G+GG +A+A+G K+RG V+I
Sbjct: 338 PYENKTALVLGSGGVAKAIAWGLKNRGVDVII 369
>gi|390986545|gb|AFM35792.1| hypothetical protein, partial [Oryza eichingeri]
Length = 156
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Query: 197 LLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGP 254
+L PKF G L +GSL KG PT L Y + I DTKV+G+I KPVGHSK P
Sbjct: 1 VLCPKFGGFLTFGSLEKGKESAPAQPTATDLINVYNIRQIGPDTKVYGIIGKPVGHSKSP 60
Query: 255 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
ILHN FR V N +YVP VDDL F +TYSS +FAGFS P+KEA ++ CDEV P+A
Sbjct: 61 ILHNEAFRSVGLNAVYVPFLVDDLSNFLNTYSSTEFAGFSCTIPHKEAAVRCCDEVDPIA 120
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
+ I AVNTIIR+P +GKL+GYNTD +I+AIED I+
Sbjct: 121 KDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIR 156
>gi|255291825|dbj|BAH89264.1| putative 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
fragment [Diospyros kaki]
Length = 188
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT--PVLGLPTVESLRQTYKVEHINADTK 239
P I ++GERGL+S++L KF G L +G+L+ G PT+ L Y I DTK
Sbjct: 1 PTIGLAMGERGLISRILCAKFGGFLTFGALESGIHSAPGQPTLRDLLDLYNFRQIGPDTK 60
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
V G+I P+GHSK P L+N F+ +NGIY+P+ VD++ F +TYSSPDF G+S P+
Sbjct: 61 VHGVIGNPIGHSKSPHLYNTAFKKAAFNGIYLPLLVDNVANFLNTYSSPDFTGYSYTIPH 120
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
K A ++ CDEV P+A+AI A++ +I++PSDGKLIGYN D +I AIE+ + + +
Sbjct: 121 KMAGLECCDEVDPIAKAIGAISCVIKKPSDGKLIGYNVDYLGAIAAIEEGLGGS--SSAS 178
Query: 360 ASFGSPLAGR 369
SPLAGR
Sbjct: 179 NGSVSPLAGR 188
>gi|242085730|ref|XP_002443290.1| hypothetical protein SORBIDRAFT_08g016980 [Sorghum bicolor]
gi|241943983|gb|EES17128.1| hypothetical protein SORBIDRAFT_08g016980 [Sorghum bicolor]
Length = 164
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 111/163 (68%), Gaps = 3/163 (1%)
Query: 190 ERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
E+G +S++L K+ G L + SL KG G PTV L YK+ I DTKVFG+I P
Sbjct: 3 EQGFISRILCAKYGGYLTFASLEKGKESAPGQPTVSDLINKYKIRQIGPDTKVFGIIGNP 62
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
V HSK PI+ N FR V ++ +++P DDL +F ST+S+PD+AGFS P+KE ++ C
Sbjct: 63 VNHSKSPIVQNQAFRSVGFDAVFLPFLSDDLVEFLSTFSAPDYAGFSCTMPHKETALRCC 122
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
D+V P+A+ I A+NTIIRRP DGKL+GYNTD +I+AIED +
Sbjct: 123 DDVDPIARDIGAINTIIRRP-DGKLVGYNTDYSGAISAIEDGL 164
>gi|406829999|ref|ZP_11089593.1| 3-dehydroquinate dehydratase [Schlesneria paludicola DSM 18645]
Length = 492
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 195/390 (50%), Gaps = 28/390 (7%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC + +++ + GA +VE+R+D + D+ +L +P PV++
Sbjct: 1 MICVSIARTRHRMMIAEHHALAERGAQLVELRIDWLAR---DPDVPRLLKDRPTPVIVTC 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R GG + G E R+ L A GADYVD E +AS+I +Y T+ IVS +
Sbjct: 58 RRAQDGGKWRGTEEARIRLLRTAIVSGADYVDLEDDIASSI--PRYGK----TKRIVSHH 111
Query: 132 LDCETPSE-EDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
TP E++ ++ M DIIK+V N ++ R+ +L+ ++P +A+ +G+
Sbjct: 112 DFNGTPDHIEEVWAEIAEM---NPDIIKVVTLANSPSDCVRMLKLVKDAKIPTVAFCMGD 168
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
G+ S++ K Y + + G + + ++ Y E INA T++FG+I P+
Sbjct: 169 FGVWSRVACGKLGSPFTYATFSQDREVAPGQLSFQDMKHIYHYETINAKTQLFGVIGDPI 228
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
GHS P+LHN R + +NG+YVP+ V D L + + + DF G SV P+KEAV+
Sbjct: 229 GHSLSPLLHNEAMRKIGFNGVYVPLRVARDQLTQTLADLETLDFRGLSVTIPHKEAVLAK 288
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
+ I A NT+ R SD + +NTD +A++ +++ A+ G L
Sbjct: 289 FPRCEEFVRQIGAANTLF-RGSDNQWQSFNTDYQAALDSVKLALPT----------GDTL 337
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ +L GAGGA RA+ G G +VI
Sbjct: 338 EGKRVLLLGAGGAARAIGMGITRAGGALVI 367
>gi|325110056|ref|YP_004271124.1| 3-dehydroquinate dehydratase [Planctomyces brasiliensis DSM 5305]
gi|324970324|gb|ADY61102.1| 3-dehydroquinate dehydratase; shikimate dehydrogenase [Planctomyces
brasiliensis DSM 5305]
Length = 496
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 187/389 (48%), Gaps = 22/389 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC + ++ + + GA +VE+RLD + + D+ ++L +P +I
Sbjct: 1 MICVSVGRTRLKMMRAEHEALSRAGAQLVELRLDWLKHVN---DISLLLKDRPTATVITC 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R G + G E +R + L A G ++VD E+ +A +I +Y TR IVS +
Sbjct: 58 RRAEDQGKWRGSEDERQKLLRAAIVDGVEFVDIEVDIAKSI--PRYGK----TRRIVSYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
ETP ++L + ++ A+ D+ K+V N + R+ +L++ ++P + + +GE
Sbjct: 112 NFEETP--DNLEEIHKQIAASDPDVAKIVTMANSPADGVRMLELVAKSKIPTVGFCMGEF 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
GL +++L K+ Y S L G + + + Y+ + I+ DT+VFG++ P+
Sbjct: 170 GLFTRVLCTKYGAPFTYASFSSERELAPGQISFREMLELYRHDQIDVDTRVFGVLGDPIA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P LHN F N +Y+P + + + + GFS+ P+KE ++
Sbjct: 230 HSYSPRLHNDAFEAEKINAVYLPFRISEQHFEDSMRALRRLNTEGFSITIPHKERIVTQA 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
D A+ I A NT+ R G NTD EA++TA+ A K+ G+ G
Sbjct: 290 DHTDDDAKEIGAANTLYRN-QKGIWFATNTDFEAAMTALRQATKKAGWPEGG------FK 342
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGARVVI 396
R ++ GAGG RA+ G G ++V+
Sbjct: 343 DRKVLILGAGGVARAIGHGVVRGGGQLVV 371
>gi|383765626|ref|YP_005444607.1| 3-dehydroquinate dehydratase/shikimate dehydrogenase [Phycisphaera
mikurensis NBRC 102666]
gi|381385894|dbj|BAM02710.1| 3-dehydroquinate dehydratase/shikimate dehydrogenase [Phycisphaera
mikurensis NBRC 102666]
Length = 528
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 196/408 (48%), Gaps = 37/408 (9%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKD-LEIILTKKPLPVLI 69
T++C P+ + L+ +A GAD+VE R D F +D L ++ LP ++
Sbjct: 2 TLLCCPITVNDADDALAACGRAAEAGADLVEFRCD---RFTDDRDALARLVADASLPCIV 58
Query: 70 VYRPKWAGGLYEGDEHKRLEALHL--AEDLGADYVDFE-LKVASNILGKQYSSHQSGTR- 125
R GG + G E R+ L + Y+DFE ++A+ G++ + TR
Sbjct: 59 TLRHASEGGGFSGLESLRVGLLLFLSQQPRPPAYLDFEHARLAALSAGERADLEDAATRC 118
Query: 126 -FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPII 184
I+S + P++ D +++ G ++K ++ + + + F+L+ P
Sbjct: 119 GLILSTHDFAGRPADLDR-RVLAMADTPGVRVLKAAWAARSLRDNLQAFELIERRLAPTA 177
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSL---KGTPVLGLPTVESLRQTYKVEHINADTKVF 241
A +G+ GL S++L+ KF G + + + GT G PT+ LR Y+ + I T+V+
Sbjct: 178 ALCMGDAGLPSRVLARKFGGFVTFAAADRASGT-APGQPTIAELRDLYRWDAIGPATRVY 236
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY---SSPDFAGFS 294
G+I PVGHSK P LHN F ++G+Y+PM + + LK S + S F G S
Sbjct: 237 GVIGDPVGHSKSPALHNAGFDASGFDGVYLPMPIPAGYEHLKATLSAWLDHGSLRFRGAS 296
Query: 295 VGFPYKEAVMKFCDE----VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
V P+K +++F +E + PLA I A NT+I DG L NTDC+A++ + A+
Sbjct: 297 VTIPHKADLLRFAEERGATIDPLAARIGAANTLIVG-EDGALAVRNTDCDAALGVVRRAL 355
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
G + G + GAGG RA+ G G RV +F+
Sbjct: 356 GGVGLR-----------GAAVAVLGAGGVSRAVVAGFADAGCRVTVFN 392
>gi|149175942|ref|ZP_01854559.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Planctomyces maris DSM 8797]
gi|148845096|gb|EDL59442.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Planctomyces maris DSM 8797]
Length = 498
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 183/390 (46%), Gaps = 23/390 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC + + V+ +GA++VE+RLD I D+ ++ +P PV+I
Sbjct: 1 MICVSIGRTRHKMVMMEHRSLAEKGAELVELRLDWIART---PDVNRLIKDRPTPVVITC 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R G + E +R L A +YVD E +A I + R I N
Sbjct: 58 RRPEDKGRWNKTEEQRQALLRTAIVSEVEYVDIEDDIAGTI-----PRYGKTKRIISHHN 112
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
D ETP +DL + + M DI+KLV N + R+ QL+++ +VP I + +GE
Sbjct: 113 FD-ETP--DDLEEIHAAMCKKDPDIVKLVTMANSPGDSVRMLQLVANAKVPTIGFCMGEY 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G++S++L K+ Y + L G + + Y+ + I +T V+G+I P+
Sbjct: 170 GVISRILCGKYGSPFTYATFSRERELAPGQLAFSEMSRIYRYDEIGPETPVYGVIGDPIA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P++HN F+H + +Y+P + D LK+ + + G+SV P+K ++
Sbjct: 230 HSLSPLIHNLAFKHDKLDAVYLPFRIPKDRLKETLKEFEWLNVQGYSVTIPHKAGALELA 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGK-LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
DE ++ + NT+ + D K NTD +A++ +I + +G + P+
Sbjct: 290 DEADEASKKMGVANTLFK--DDKKAWQARNTDYDAALDSIRLGLDPQG-----KATADPI 342
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ +L GAGG RA+ G + G + I
Sbjct: 343 NGKQVLLLGAGGVSRAIGAGIVAAGGVLTI 372
>gi|296122090|ref|YP_003629868.1| 3-dehydroquinate dehydratase [Planctomyces limnophilus DSM 3776]
gi|296014430|gb|ADG67669.1| 3-dehydroquinate dehydratase, type I [Planctomyces limnophilus DSM
3776]
Length = 517
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 181/349 (51%), Gaps = 24/349 (6%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAE-GADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+ IC + ++ Q++ +QA A+ GA++VE+R+D ++ D++ +L +P P ++
Sbjct: 3 SQICVGI-GRTRHQMMIAEHQALAQKGAELVELRVDYLSR---TPDMKRLLADRPTPTIV 58
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
R G + G E +R L A GADYVD E +A I ++Y T+ I+S
Sbjct: 59 TCRRVADRGRFRGTEEERQTILRTAILSGADYVDIEADIAPQI--RRYGK----TKRIIS 112
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 189
+ +TP +DL ++M AD++K+V N + R+ +L+ QVP + + +G
Sbjct: 113 HHDFDQTP--DDLEEKYAQMCKLDADLVKIVTMANRAEDCVRMLKLVEGAQVPTVGFCMG 170
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKP 247
E+G+++++L F Y + L G + + +R+ ++ E I T + G++ P
Sbjct: 171 EKGMLTRVLCGAFGSPFTYATFNKERELAPGQFSFDEMRKMFRYEQITRKTILLGVLGDP 230
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
V HS P+LHN R ++G+Y+P+ V +L + Y F G+S P+KE+V++
Sbjct: 231 VAHSLSPLLHNTLMRKAGFDGVYLPLRVSASELSETLDAYEQLGFTGYSATIPHKESVLQ 290
Query: 306 ---FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
CD+ +AI A NT+ R + G NTD +A++ AI +K
Sbjct: 291 KYPMCDD---FVRAIGAANTVYRDQA-GHWACSNTDYQAALDAILSGLK 335
>gi|424513634|emb|CCO66256.1| predicted protein [Bathycoccus prasinos]
Length = 562
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 169/346 (48%), Gaps = 37/346 (10%)
Query: 38 DVVEIRLDCINNF----------QPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87
D+VE+R+D + G+ +E +P ++ +RP W GG +GDE R
Sbjct: 42 DIVELRVDFLEKSIRSDERKMKEAIGQLVEACEKVAKIPCVVTFRPTWEGGQDDGDEETR 101
Query: 88 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT-----RFIVSCNLDCE-TPSEED 141
L L GA YVD EL +A K + G + ++ + + E TPS +
Sbjct: 102 LRCLWEGFRAGATYVDCEL-LAIERFAKAKPDERDGVIKGPGQMLICSSHEYELTPSLDV 160
Query: 142 LGYLVSRMQATGA----DIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSVGERGLV 194
L L + + A DI K+ DI ++ R+ ++L + P + E GL+
Sbjct: 161 L--LKEKYEKIRANDMCDIAKIACVCQDINDVGRLAKVLEKARGDGYPCAVLGMSEHGLI 218
Query: 195 SQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINA-DTKVFGLISKPVGHS 251
S+LL+ K L +GS++ G PT+ L + Y+V +TK+ G++ P+ S
Sbjct: 219 SRLLATKLGSYLTFGSIRAGFESAPGQPTLRDLSELYRVNTSQTRETKILGVMGNPIAQS 278
Query: 252 KGPILHNPTFRHVNYNG-IYVPMFVDDLKKFFSTYS-----SPDFAGFSVGFPYKEAVMK 305
K P LHN + YVP+ V D +F S + D+ GFSV P+KE+ +K
Sbjct: 279 KSPQLHNKALISAKVDDKCYVPLLVKDFAEFVENESLFNNKNNDWVGFSVTIPHKESALK 338
Query: 306 FCDE-VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
FC E V P+A+ I AVNT++R+ DG GYNTD A+I AIE A+
Sbjct: 339 FCGENVDPVAKQIGAVNTLVRQ-KDGSFRGYNTDYVAAIGAIEKAL 383
>gi|347755767|ref|YP_004863331.1| shikimate 5-dehydrogenase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588285|gb|AEP12815.1| shikimate 5-dehydrogenase [Candidatus Chloracidobacterium
thermophilum B]
Length = 514
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 191/409 (46%), Gaps = 45/409 (11%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVL 68
MIC P+ A + + +L+ + A A AD +E+RLD ++N + L +L ++P PV+
Sbjct: 1 MICTPIAASTPDDLLAALPVAAAA-ADWLELRLDALHNLSVEAVLRALHHVLPRRPRPVV 59
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIV 128
+ +RP+ GG + RL H A A+ D E + + +L H R +V
Sbjct: 60 VTFRPREQGGFRDLSHADRLRFWHSALTTPAEAFDLETDLIAQLLPTYPPDHPVWARVVV 119
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--------- 179
S + TP+ D+ A +KL VN ++ R+F L+
Sbjct: 120 SHHDFQATPA--DIHAFALAHFPPHAGTVKLAVKVNQPDDVCRLFDWLTGTPSATPSTWQ 177
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGS-LKGTPVL-GLPTVESLRQTYKVEHINAD 237
++P+ +G G+++++L P + Y + G V G T LR+T+++ ++
Sbjct: 178 KIPV---GMGGLGVLTRILGPAYGARWTYSTGHDGRAVAPGQLTATELRETFRLSSLDRH 234
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP------- 288
T V GL+ PV HS LHN F H+ N +Y+P+ V DDL F P
Sbjct: 235 TIVAGLLGCPVAHSLSKDLHNAAFAHLGLNWVYIPVEVSPDDLAPFLRDAIHPRTRRLPW 294
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G+SV P+K A++ + D + A + AVNTI+ S +LIG NTD ++
Sbjct: 295 TVGGYSVTLPHKVAILPYLDRLTATAARVGAVNTILV--SGQELIGDNTDVAGAM----- 347
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
R + A G P+A + GAGGA +A+ G + GA+V +F
Sbjct: 348 ----RPLQQRFAVEGEPVA-----VLGAGGAAQAVVCGLVAAGAQVTVF 387
>gi|337292890|emb|CCB90890.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic [Waddlia chondrophila 2032/99]
Length = 456
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 186/392 (47%), Gaps = 56/392 (14%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
+C P+ A+++ + L + A A+++E+RLD +++ P E++ + PV+ YR
Sbjct: 3 VCVPITARTLPEALKEISFA-CSIAEMIELRLDYLDHPSPEGINELVQACEK-PVIATYR 60
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
K L L A D GADYVD E + ++ R I S +L
Sbjct: 61 KKNPVPL-----------LKAALDAGADYVDVE----------EINTSLPLERCIYSIHL 99
Query: 133 DCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLS-HCQVPIIAYSVGER 191
ETP E+L M+A+GA IIK+V + + I LL + + +IA+ +GE+
Sbjct: 100 Q-ETPPLEEL---YQSMKASGAAIIKIVPTARSFIDNIAILNLLKKYPEDRLIAFCMGEK 155
Query: 192 GLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
GL+S+ +P + +G++ K P G P LR+ +K + +T + G+I P
Sbjct: 156 GLLSRYFAPAYGSFCTFGAIAEGKKSAP--GQPLATHLRK-WKAQ---VNTTLCGVIGDP 209
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
+ HS P +H + N +++P +DL K G +V P+KE+V+
Sbjct: 210 ITHSLSPAIHQAAYEADGLNFLFLPFHTTKEDLPKILDLMRQFPLKGLAVTIPHKESVIP 269
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
DEV AQAI AVNTII GKL GYNTD ++ ++ +
Sbjct: 270 MLDEVDVEAQAIGAVNTIINH--GGKLTGYNTDVFGAVQPLQKR--------------TD 313
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
L G+ + G GGA +A A+G + G+ V +F
Sbjct: 314 LRGKRVAILGNGGAAKAFAYGLQKEGSVVTLF 345
>gi|320106134|ref|YP_004181724.1| shikimate 5-dehydrogenase [Terriglobus saanensis SP1PR4]
gi|319924655|gb|ADV81730.1| shikimate 5-dehydrogenase [Terriglobus saanensis SP1PR4]
Length = 706
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 182/394 (46%), Gaps = 28/394 (7%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQ--PGKDLEIILTKKPLPVLIV 70
+C P+ A++ ++L + E +E+RLD + Q G+ L+ L+ +PL +I
Sbjct: 21 VCVPIAAKNAGEMLDRAAEVGRE-TPFLELRLDSLEKPQLVTGR-LKQFLSDRPLITMIA 78
Query: 71 Y-RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIV 128
R K GG + G +++E L + G VD E++ A + +G ++
Sbjct: 79 TCRRKANGGDFAGSAEEQMEHLLASAKSGCQIVDMEVETAEALKATALDKLRDAGCVVML 138
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL-SHCQ-VPIIAY 186
S + TP DL + RM D K+V + + + ++ LL H + ++A
Sbjct: 139 SFHDFKGTP---DLDAVYDRMAKFSPDFYKIVPTAKSLPDNLKVTALLEKHAEDANVVAL 195
Query: 187 SVGERGLVSQLLSPKFNGALVYG--SLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLI 244
++G G+++++L P+F +G ++ G +L + Y+++ I A T+++G+
Sbjct: 196 AMGNFGVLTRILGPRFGSVFTFGAATVGEETAPGQVAARTLTELYRMDGIEASTRIYGVA 255
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
PV S P++ N FR N +YV + D+K G SV P K ++
Sbjct: 256 GSPVTSSLSPLMINTAFRRETVNAVYVALETGDVKDLLKVMEKLPIHGVSVTMPLKTDIL 315
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
++ PL+ I A NT++R DGKL G+NTD + +E +
Sbjct: 316 AHLEKTDPLSAKIGACNTVVRA-QDGKLYGFNTDVGGIVGPLERRV-------------- 360
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL G ++ GAGG RA FG K +GA V I +
Sbjct: 361 PLRGAKVLVLGAGGVARAAVFGLKDKGAEVSILN 394
>gi|381179077|ref|ZP_09887939.1| Shikimate dehydrogenase substrate binding domain protein [Treponema
saccharophilum DSM 2985]
gi|380769025|gb|EIC03002.1| Shikimate dehydrogenase substrate binding domain protein [Treponema
saccharophilum DSM 2985]
Length = 502
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 198/405 (48%), Gaps = 43/405 (10%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LPV 67
++C L +++++ + + + D+VE+R DC+ +D + + P +P
Sbjct: 5 LVCLCLTGKTIDEDV-RIAEEYIRYIDMVELRADCLE-----EDERLNIRDFPSLVKVPC 58
Query: 68 LIVYRPKWAGGLYEGDEHKR----LEALHLA-EDLGAD--YVDFELKVASNILGKQYSSH 120
L+ R GG YE E R AL A ED + YVDFE + G Q ++
Sbjct: 59 LLTIRRVADGGKYEEGEASRSMLFARALAFADEDKRKNFAYVDFEDDFI--VPGLQDAAL 116
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEIARIFQLLS 177
GTR I S + D P + ++ +S+M+ TG +I K+ F S++DIT++ + LS
Sbjct: 117 AFGTRIIRSFH-DMNNPVK-NIAQRLSKMRMTGFEIPKIAFMPKSLSDITDLFKEASALS 174
Query: 178 HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGS----LKGTPVLGLPTVESLRQTYKVEH 233
+ I A S GL +++L+ +FN L + S ++ LG SL Y+
Sbjct: 175 GTEQIICAMSAF--GLPTRVLAQRFNSYLSFTSPAELMENVKGLGHVDPVSLSSLYRFRS 232
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+++T++FG+ P+ + P +HN F N +YVP + ++ F ++ GF
Sbjct: 233 IDSETRLFGITGFPLVATSSPKIHNTIFGENEMNAVYVPFKAEKAEEAFEFANTMGVCGF 292
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE ++ D V Q + A NT++R DGK +G+NTDC E AIKE
Sbjct: 293 SVTVPHKETIIPLLDSVDKGVQEMGACNTVVR--EDGKWLGFNTDC----IGFELAIKEF 346
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
++ L+G + GAGGA +A+ + K+ GA IF+
Sbjct: 347 TGRDS-------LSGMKVSVIGAGGAAKAIVYALKNLGADACIFN 384
>gi|297621526|ref|YP_003709663.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Waddlia chondrophila WSU 86-1044]
gi|297376827|gb|ADI38657.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Waddlia chondrophila WSU 86-1044]
Length = 456
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 186/392 (47%), Gaps = 56/392 (14%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
+C P+ A+++ + L + A A+++E+RLD +++ P E++ + PV+ YR
Sbjct: 3 VCVPITARTLPEALKEISFA-CSIAEMIELRLDYLDHPSPEGINELVQACEK-PVIATYR 60
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
K L L A D GADYVD E + ++ R I S +L
Sbjct: 61 KKNPVPL-----------LKAALDAGADYVDVE----------EINTSLPLERCIYSIHL 99
Query: 133 DCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLS-HCQVPIIAYSVGER 191
ETP E+L M+A+GA IIK+V + + I LL + + +IA+ +GE+
Sbjct: 100 Q-ETPPLEEL---YQSMKASGAAIIKIVPTARSFIDNIAILNLLKKYPEDRLIAFCMGEK 155
Query: 192 GLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
GL+S+ +P + +G++ K P G P LR+ +K + +T + G+I P
Sbjct: 156 GLLSRYFAPAYGSFCTFGAIAEGKKSAP--GQPLATHLRK-WKAQ---VNTTLCGVIGDP 209
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
+ HS P +H + N +++P +DL K G +V P+KE+V+
Sbjct: 210 ITHSLSPAIHQAAYEADGLNFLFLPFHTTKEDLPKILDLMRQFPLRGLAVTVPHKESVIP 269
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
DEV AQAI AVNTII GKL GYNTD ++ ++ +
Sbjct: 270 MLDEVDVEAQAIGAVNTIINH--GGKLTGYNTDVFGAVQPLQKR--------------TD 313
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
L G+ + G GGA +A A+G + G+ V +F
Sbjct: 314 LRGKRVAILGNGGAAKAFAYGLQKEGSVVTLF 345
>gi|116626199|ref|YP_828355.1| shikimate dehydrogenase [Candidatus Solibacter usitatus Ellin6076]
gi|116229361|gb|ABJ88070.1| shikimate dehydrogenase / 3-dehydroquinate dehydratase [Candidatus
Solibacter usitatus Ellin6076]
Length = 509
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 187/397 (47%), Gaps = 31/397 (7%)
Query: 7 TKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII---LTKK 63
T++ IC L V +L + + G +E RLD ++N P K E I L +
Sbjct: 4 TRSLPRICIALGLPDVPTLLDHARREAEAGEVFLEFRLDYLSN--PCKGAEAIGKFLEEF 61
Query: 64 PLPVLIVY-RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS 122
P +L+ R G + G ++L L LA GA +D E++ A I + + +
Sbjct: 62 PECILLATCRRHQNHGKFNGSIEEQLAVLDLAVRNGAHAIDVEIETA-EIAQDRLNQFRG 120
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP 182
T+ IVS + TP + + V ++QA I+ +D + + + L+ +V
Sbjct: 121 RTQVIVSYHNFEATPPMDTVVNRVMKVQADAYKIVSTARKPSDNVRVLAVAKALTKHRVI 180
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGS---LKGTPVLGLPTVESLRQTYKVEHINADTK 239
++A +GE G +++LSP F G Y + +GT G + LR Y+VE + K
Sbjct: 181 VLA--MGELGFPTRVLSPVFGGVFTYAAPIYAEGTAA-GQVSARYLRHLYRVEKLGKSAK 237
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGF 297
++G+I+ P+ HS P +HN F+ + +Y+P V L+ FFS + +GFSV
Sbjct: 238 IYGVIADPIRHSISPAVHNRAFQSRRVDAVYLPFLVAPACLRDFFSLAAKLPLSGFSVTI 297
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K+ ++++ D V PLA+ I AVNT+ R+ GK G NTD + +K
Sbjct: 298 PHKQKIIRYLDIVDPLARRIGAVNTVWRKA--GKWRGTNTDAAGVTGPLSRLLK------ 349
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARV 394
++ ++ G GGA R+ A GA++
Sbjct: 350 --------ISKASVLIVGNGGAARSAACALSDAGAKI 378
>gi|386346035|ref|YP_006044284.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6578]
gi|339411002|gb|AEJ60567.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6578]
Length = 491
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 185/395 (46%), Gaps = 30/395 (7%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
+C L ++ E+ + + + E D+VE+R DC++ + L + LP ++ R
Sbjct: 5 VCLSLTGRTKEEAEEQLARWR-EKVDLVEVRADCMDE-SAWEGLGEWASGLGLPAILTLR 62
Query: 73 PKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
GG +EG E EAL L G YVD E A ++ + + G I S +
Sbjct: 63 SDRDGGFFEGTEDVHDEALGELVRQGGWAYVDVEAWAADWLVDE---VRRRGMHVIRSRH 119
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIK----LVFSVNDITEIARIFQLLSHCQVPIIAY- 186
+ P EDL + + ++ G ++ ++ D+ + R+ + ++ +P +Y
Sbjct: 120 VMDGVP--EDLEHWM--VETAGQGLVPKAACMLGGTEDLLRLVRLHRRITAEGLPPGSYI 175
Query: 187 --SVGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKVEHINADTKVFGL 243
+G G+ S++LS + L + S G T G + Y+V ++ T +FG+
Sbjct: 176 LLGMGPYGVPSRILSLAWGSLLTFSSDPGRTAAPGHLDPGVMADLYRVRELSESTVLFGV 235
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I PV HS+ P LHNP +R + +Y+P+ VDDL F G SV P+KE V
Sbjct: 236 IGNPVLHSRSPHLHNPVYRREGMDAVYLPIQVDDLTSFMDLADELSLQGLSVTIPHKEGV 295
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ F P+ QA+ + NT++RR DG G +TD E + + + I A G
Sbjct: 296 IPFLTVRDPVVQAVGSCNTMVRR--DGGWFGTSTDVEGFLRPLREEI---------ARGG 344
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
P+ VL GAGGA RA+ +G G RV++ +
Sbjct: 345 DPVMKAAVVL-GAGGAARAVVYGLVQEGFRVLVLN 378
>gi|338733093|ref|YP_004671566.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Simkania negevensis Z]
gi|336482476|emb|CCB89075.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic [Simkania negevensis Z]
Length = 493
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 160/331 (48%), Gaps = 25/331 (7%)
Query: 38 DVVEIRLDCINNFQPGKDLEIILTKK---PLPVLIVYRPKWAGGLYEGDEHKRLEALHLA 94
+ +E+RLD + KDLE + K LPV+ R K GG ++G E +R L
Sbjct: 25 EAIELRLDLL------KDLEHVSKLKSLCKLPVIFTLRKKAQGGEFQGSEQEREAKLLEL 78
Query: 95 EDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA 154
L DYVD E V + K HQS + C+ + ++L ++++M A
Sbjct: 79 LTLKPDYVDLEFDVDPSFAKK---VHQSFPDVAIICSYHDFDKTPDNLENVLTQMTQMRA 135
Query: 155 DIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSVGERGLVSQLLSPKFNGALVYGSL 211
I K+ N + R+ + + + + S+G G ++++L+P + L Y SL
Sbjct: 136 SIYKIATFANSSLDSLRMLSFILQKRREGISLAGMSMGPHGDITRILAPIVDSLLTYTSL 195
Query: 212 ----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYN 267
K P G V++L + Y+ +N TKV+ LI PV S G HN F+ + N
Sbjct: 196 SSEEKTAP--GQVPVDTLEKIYRFSTLNQQTKVYALIGDPVEQSIGHFAHNTLFKKLKEN 253
Query: 268 GIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 325
+YV + V +++ FF + F GFSV P KE V + D ++P A+ I A+NT+
Sbjct: 254 AVYVKILVRSEEVGPFFQLLKTLPFHGFSVTMPLKEKVGEHLDHINPQAKKIGAINTL-- 311
Query: 326 RPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
++G+ G+NTD ++ AIE+ + G K
Sbjct: 312 NLNEGRWEGFNTDASGALDAIEEKRQVAGKK 342
>gi|168699805|ref|ZP_02732082.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Gemmata obscuriglobus UQM 2246]
Length = 520
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 166/341 (48%), Gaps = 18/341 (5%)
Query: 23 EQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEG 82
+ V++ + +A GA +E+RLD + D + + K P + R GG + G
Sbjct: 16 KMVVAELQEAVKRGAKFIELRLDFLAK---AVDFKRLTPLKQCPWVATLRRPADGGRFSG 72
Query: 83 DEHKRLEALHLAEDLGA-DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEED 141
+E +R+ + A GA ++VD E +A + +Y + IVS + ETP+ +
Sbjct: 73 NEQERMMIIRQAIASGAFEWVDLETDIAGAV--PRYGK----VKRIVSYHNTAETPA--N 124
Query: 142 LGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPK 201
L + + M AD+ K+ + ++A++ L P +A+ +G+ G ++ L+ K
Sbjct: 125 LDDIFADMLKQDADVYKIAVAAQSPADVAKVLHLQRTAPKPTVAFCMGDIGQPTRFLALK 184
Query: 202 FNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNP 259
F +Y + + GLP+ + R TY V+ I ADT++FG++ PVGHS P+LHN
Sbjct: 185 FGAPWIYAAFNKERGIAPGLPSFDEFRTTYPVQEITADTQIFGVLGDPVGHSLSPLLHNH 244
Query: 260 TFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317
+R + N +Y+P V L + Y G+SV P+KEA + P
Sbjct: 245 MYRKLGVNALYLPFQVPRGQLSQALEVYGQIPVRGYSVTIPHKEAAAALAKQAEPTVPFT 304
Query: 318 AAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+ NT++RR DG NTD A + +++ + ++ K+G
Sbjct: 305 GSANTLVRR-DDGAFAAANTDLGAILDSLKAHLAQKS-KDG 343
>gi|397911048|gb|AFO68800.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
Length = 246
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 102/142 (71%), Gaps = 12/142 (8%)
Query: 255 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
+L+N F+ V ++G+YV + VDD+ KF TYSSPDF GFS P+KEA + DE+ P+A
Sbjct: 1 LLYNQAFKSVGFDGVYVHLLVDDITKFLRTYSSPDFVGFSCTIPHKEAALGCLDEIDPVA 60
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
++I AVN IIR PSDGKL GYNTD +I+AIED ++ SPLAG++FV+
Sbjct: 61 KSIGAVNCIIRSPSDGKLSGYNTDYFGAISAIEDGLQ------------SPLAGKLFVVI 108
Query: 375 GAGGAGRALAFGAKSRGARVVI 396
GAGGAG+ALA+GAK +GAR+VI
Sbjct: 109 GAGGAGKALAYGAKEKGARIVI 130
>gi|147837951|emb|CAN60562.1| hypothetical protein VITISV_034025 [Vitis vinifera]
Length = 124
Score = 130 bits (328), Expect = 1e-27, Method: Composition-based stats.
Identities = 56/102 (54%), Positives = 78/102 (76%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+IC P+MA SV+Q+L + +AK G D+VEIRLD + NF P +DL+ ++ + PLP
Sbjct: 21 RNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQSPLPT 80
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA 109
L+ YRP W GG Y+GDE KRL+AL LA +LGADY+D EL+V+
Sbjct: 81 LVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVS 122
>gi|307718011|ref|YP_003873543.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6192]
gi|306531736|gb|ADN01270.1| 3-dehydroquinate dehydratase, type 1 [Spirochaeta thermophila DSM
6192]
Length = 491
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 183/391 (46%), Gaps = 22/391 (5%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
+C L ++ ++ + + + + E D++E+R DC++ + + L + LP ++ R
Sbjct: 5 VCLSLTGRTRKEAETQLARWREE-VDLLEVRADCMDEGE-WEGLGEWASGLGLPAILTLR 62
Query: 73 PKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
GG +EG E EAL L G YVD E A ++ + + + G I S +
Sbjct: 63 SDRDGGFFEGTEDVHDEALGELIRQGGWAYVDVEAWAADWLVDE---ARRRGMYVIRSRH 119
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY---SV 188
+ P + + + + Q ++ D+ + R+ + L+ +P +Y +
Sbjct: 120 VMDGVPEDLEDWMVETVGQGLVPKAACMLGGTEDLLRLVRLHRRLTARGLPPGSYILLGM 179
Query: 189 GERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
G G+ +++LS + L + S G T G + Y+V ++ T +FG+I P
Sbjct: 180 GPYGVPTRILSLAWGSLLTFTSDPGRTAAPGHLDPGVMADLYRVRELSESTVLFGVIGNP 239
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
V HS+ P LHNP +R + +Y+P+ VD+L F G SV P+KE V+ F
Sbjct: 240 VLHSRSPHLHNPVYRREGMDAVYLPIQVDELASFMDLADELPLQGLSVTIPHKEGVIPFL 299
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
P+ QA+ + NT++RR DG G +TD E + + + I A G P+
Sbjct: 300 TVCDPVVQAVGSCNTMVRR--DGGWFGTSTDVEGFLRPLREEI---------ARGGDPVM 348
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
VL GAGGA RA+ +G G RV++ +
Sbjct: 349 KAAVVL-GAGGAARAVVYGLVQEGFRVLVLN 378
>gi|110729183|gb|ABG88186.1| CPC-1 [Cucumis sativus]
Length = 130
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Query: 252 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311
K P L+N F+ V + IYVP+ VDD KF TYSS D GFSV P+KEAV K+CDEV
Sbjct: 1 KLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAVFKYCDEVD 60
Query: 312 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 370
P+A+A AVN ++RR SDGKL GYNTDC +I+AIED + G N + + S LAG++
Sbjct: 61 PVAKATGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGL--LGLHNDSFAVSSRLAGKL 117
>gi|94971136|ref|YP_593184.1| 3-dehydroquinate dehydratase [Candidatus Koribacter versatilis
Ellin345]
gi|94553186|gb|ABF43110.1| 3-dehydroquinate dehydratase / shikimate dehydrogenase [Candidatus
Koribacter versatilis Ellin345]
Length = 613
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 161/354 (45%), Gaps = 19/354 (5%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGA----DVVEIRLDCINNFQPGKDL---EIILTKKPL 65
+C ++ + E+++ AKAEG +E RLD + N P L + +L +P
Sbjct: 19 VCVAVIGATPEEMI-----AKAEGIIRENPFLEFRLDYLTN--PAAALPKVKRLLETRPD 71
Query: 66 PVLI-VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
V+I R GG ++G +LE L A G +D EL+ A ++ + +
Sbjct: 72 AVIIGTCRRAVNGGKFKGSASAQLEILAKAAAAGCQLLDVELETAESVKASELQKLREAA 131
Query: 125 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPII 184
I+S + T +D+ + ++ ++ S+ D ++ + + H +I
Sbjct: 132 SIILSFHDFKATKKLDDILARMVKIHVEYYKVVSTATSLYDNVQMMKFLEKHGH-DYWLI 190
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFG 242
+GE+G++S++LS + + + G T LR T++++H++A T V+G
Sbjct: 191 GLCMGEQGIISRVLSVRAGSVFTFAAASAGEETAPGQVTYRDLRSTFRIDHVDAATHVYG 250
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEA 302
+ PV HS P + N FR N NG+Y+ + + G S+ P+KE
Sbjct: 251 VAGDPVAHSLSPAMMNLAFRRENVNGVYLALHTKKTDDLMACIRDIPLRGLSITMPHKEE 310
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
++K L + I AVNTI+ R DGKL G+NTD + + D I G K
Sbjct: 311 MVKHLANTDDLVRKIGAVNTIV-RAQDGKLYGFNTDVAGIVGPLSDRITVTGAK 363
>gi|295660620|ref|XP_002790866.1| pentafunctional AROM polypeptide [Paracoccidioides sp. 'lutzii' Pb01]
gi|327507665|sp|C1H8L1.1|ARO1_PARBA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|226281118|gb|EEH36684.1| pentafunctional AROM polypeptide [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1523
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 176/392 (44%), Gaps = 46/392 (11%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWA 76
SN+ + G+D VE+R+D + + Q P D + ++ ++ +P++ R K
Sbjct: 985 SNILKEVTLGSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQ 1044
Query: 77 GGLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + D + L+ LA +G+++VD EL +L + + G I++ + D E
Sbjct: 1045 GGRFPDDAYDAALRLYCLAIRMGSEFVDLELSFPEQLL--RTVTEMKGFSKIIASHHDPE 1102
Query: 136 TPSEEDLGYLVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVG 189
G + D+IKLV + + A + + + + VP+IA ++G
Sbjct: 1103 GLLSWANGSWIQIYNKALQYGDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMG 1162
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKP 247
+G +S++L NG + S G P P S R+ K + + K F +I KP
Sbjct: 1163 YKGQLSRIL----NGFMTPVSHPGLPFKAAPGQLSAREIRKGLSLMGEIKAKKFAVIGKP 1218
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVD---DLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
V S+ P +HN F+ + Y + D D+K+F SPDF G SV P K +M
Sbjct: 1219 VSSSRSPAMHNALFKQMGLPHTYGRIETDNPEDVKEFIR---SPDFGGASVTIPLKLDIM 1275
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPS-------DGKLIGYNTDCEASITAIEDAIKERGYKN 357
DE+ P A+ I AVNTI+ P+ +LIG NTD + + + DA
Sbjct: 1276 PLLDEIAPEAEMIGAVNTIVSVPAAPGDKSQSSRLIGRNTDWQGMVRCLSDA-------- 1327
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
G S +P ++ G GG RA F S
Sbjct: 1328 GAYSAATPTTSSAGLIIGGGGTARAAIFALNS 1359
>gi|327507667|sp|C0S433.1|ARO1_PARBP RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|225681904|gb|EEH20188.1| pentafunctional AROM polypeptide [Paracoccidioides brasiliensis Pb03]
Length = 1603
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 40/389 (10%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWA 76
SN+ + G+D VE+R+D + + Q P D + ++ ++ +P++ R K
Sbjct: 1074 SNILKEVTLGSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQ 1133
Query: 77 GGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + D + L+ LA +G+++VD EL +L + + G I++ + D E
Sbjct: 1134 GGRFPDDAYDAALQLYRLAIRMGSEFVDLELSFPKQLL--RTVTEMKGFSKIIASHHDPE 1191
Query: 136 TPSEEDLGYLVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVG 189
G + D+IKLV + + A + + + + VP+IA ++G
Sbjct: 1192 GLLSWANGSWIQIYNKALQYGDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMG 1251
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKP 247
+G +S++L NG + S P P S R+ K + + K F +I KP
Sbjct: 1252 YKGQLSRIL----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLMGEIKAKKFAVIGKP 1307
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
V S+ P +HN F+ + Y + D+++ SPDF G SV P K +M
Sbjct: 1308 VSSSRSPAMHNALFKQMGLPHTYGRIETDNVEDVKEFILSPDFGGASVTIPLKLDIMPLL 1367
Query: 308 DEVHPLAQAIAAVNTIIRRPS-------DGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
DE+ P A+ I AVNTI+ P+ +LIG NTD + + + DA G
Sbjct: 1368 DEIAPEAEMIGAVNTIVSVPAAPGDKFQSSRLIGRNTDWQGMVRCLSDA--------GAY 1419
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
S +P ++ G GG RA F S
Sbjct: 1420 SAATPTTSSAGLIIGGGGTARAAIFALNS 1448
>gi|327507666|sp|C1FYJ9.1|ARO1_PARBD RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|226289074|gb|EEH44586.1| pentafunctional AROM polypeptide [Paracoccidioides brasiliensis Pb18]
Length = 1538
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 40/389 (10%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWA 76
SN+ + G+D VE+R+D + + Q P D + ++ ++ +P++ R K
Sbjct: 985 SNILKEVTLGSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQ 1044
Query: 77 GGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + D + L+ LA +G+++VD EL +L + + G I++ + D E
Sbjct: 1045 GGRFPDDAYDAALQLYRLAIRMGSEFVDLELSFPEQLL--RTVTEMKGFSKIIASHHDPE 1102
Query: 136 TPSEEDLGYLVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVG 189
G + D+IKLV + + A + + + + VP+IA ++G
Sbjct: 1103 GLLSWANGSWIQIYNKALQYGDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMG 1162
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKP 247
+G +S++L NG + S P P S R+ K + + K F +I KP
Sbjct: 1163 YKGQLSRIL----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLMGEIKAKKFAVIGKP 1218
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
V S+ P +HN F+ + Y + D+++ SPDF G SV P K +M
Sbjct: 1219 VSSSRSPAMHNALFKQMGLPHTYGRIETDNVEDVKEFILSPDFGGASVTIPLKLDIMPLL 1278
Query: 308 DEVHPLAQAIAAVNTIIRRPS-------DGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
DE+ P A+ I AVNTI+ P+ +LIG NTD + + + DA G
Sbjct: 1279 DEIAPEAEMIGAVNTIVSVPAAPGDKSQSSRLIGRNTDWQGMVRCLSDA--------GAY 1330
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
S +P ++ G GG RA F S
Sbjct: 1331 SAATPTTSSAGLIIGGGGTARAAIFALNS 1359
>gi|325971052|ref|YP_004247243.1| 3-dehydroquinate dehydratase [Sphaerochaeta globus str. Buddy]
gi|324026290|gb|ADY13049.1| 3-dehydroquinate dehydratase [Sphaerochaeta globus str. Buddy]
Length = 494
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 186/406 (45%), Gaps = 46/406 (11%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LPV 67
M+C L ++E+ + + + + + E+RLD ++ D + I + P +PV
Sbjct: 1 MLCLTLTGSTLEENRA-LVERNRKWISLAELRLDYLH-----PDEQKIASSFPSTVDVPV 54
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFE-------LKVASNILGKQYSSH 120
++ R GG E +RL+ L+ A YVD E LK + ++
Sbjct: 55 ILTLRRSSDGGSCTLSEKQRLQLLYEAAKGDFAYVDIEDDVKKTDLKFKDPLFEQKVDLE 114
Query: 121 QSGTRFIVSC-----NLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEIARI 172
QS + + N +C P+ D+ +S++ A G DI K+ S+ D+ + R+
Sbjct: 115 QSLKQRHIKIIRSYHNFEC-VPA--DIFGRISKLAAKG-DIPKVAVTPKSMMDVITLFRV 170
Query: 173 FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE 232
Q L++ + I+ +GE G+ +++L K L + S G + +++ Y+ +
Sbjct: 171 EQELANLKEKIVI-GMGEYGICTRILYKKCGSFLSFCS-DSQAAPGHLSAQTMSTLYRAD 228
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAG 292
++ T +FG+I PV H+ P +HNP F + YN +YVP VD ++ FF G
Sbjct: 229 KLDEKTHIFGIIGNPVYHTASPKIHNPGFEAIRYNAVYVPFLVDSVRAFFKLAEMLQIHG 288
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
FSV P+K +V + + + I + NT++R + K G NTD + I + + +
Sbjct: 289 FSVTVPHKRSVQPYLGRITREVKQIGSCNTVVRIQNMWK--GTNTDYYGFLAPISEQLGK 346
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
KN ++ GAGGA RA+ + + G +V I +
Sbjct: 347 GEIKNA-------------LVVGAGGAARAVVWALHNHGVKVTILN 379
>gi|315040954|ref|XP_003169854.1| pentafunctional AROM polypeptide [Arthroderma gypseum CBS 118893]
gi|311345816|gb|EFR05019.1| pentafunctional AROM polypeptide [Arthroderma gypseum CBS 118893]
Length = 1571
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 171/392 (43%), Gaps = 42/392 (10%)
Query: 24 QVLSNMYQAKAEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRP 73
Q N+ QA + G+D VE+R+D + + + + + ++ LP++ R
Sbjct: 1063 QPCGNILQAASFGSDAVELRVDLLKDPSSTSGIPSVNYVAEQISFLRSQVSLPLIFTIRT 1122
Query: 74 KWAGGLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
K GGL+ + L+ LA +G++++D E+ N+L + G I++ +
Sbjct: 1123 KAQGGLFPDNAFDEALGLYKLAIRMGSEFIDLEISFPDNLL--HVVTEMKGFSKIIASHH 1180
Query: 133 DCETPSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAY 186
D G + D+IKL+ + + + Q S + VPIIA
Sbjct: 1181 DVNGQLSWSNGSWIQYYNKALQHGDVIKLIGVAKSLDDNLSLKQFKSWAEKSYPVPIIAI 1240
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGL 243
++G++G +S++L NG + S P P + + +RQ + D K F L
Sbjct: 1241 NMGDKGRLSRIL----NGFMTPVSHPALPFKAAPGQISAKEIRQALTLMG-ELDAKKFAL 1295
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
KP+ S+ P LHN F + Y + DD+ S +F G SV P KE +
Sbjct: 1296 FGKPISASRSPALHNTLFAQAGFPHEYGRLETDDVGDVKEFIRSEEFGGASVTIPLKEHI 1355
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGT 359
M+ DE+ P A+ I AVNTI+ +G KL+G+NTD + ++DA G
Sbjct: 1356 MELLDEISPEAKIIGAVNTIVPAFEEGKKSRKLVGFNTDWQGMARCLKDA--------GA 1407
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
G ++ G+GG RA + S G
Sbjct: 1408 MYLKK---GESALIIGSGGTARAAIYSLHSMG 1436
>gi|327507649|sp|C5G8R4.1|ARO1_AJEDR RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|239607236|gb|EEQ84223.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis ER-3]
Length = 1597
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 173/385 (44%), Gaps = 46/385 (11%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIIASHHDPKGELSWANGS 1193
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV + + A + + + + VPIIA ++G++G +S++L
Sbjct: 1194 WIQFYNKALQYGDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDKGQLSRML 1253
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPIL 256
NG + S P P S R+ K + + +K F +I PV S+ P +
Sbjct: 1254 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKSKKFAVIGNPVSASRSPAM 1309
Query: 257 HNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 313
HN FR + IY + +D +KKF SPDF G S+ P K +M DE+ P
Sbjct: 1310 HNALFRQMGLPHIYGTLETEDPEIVKKFIR---SPDFGGASITIPLKLDIMPLLDEIAPE 1366
Query: 314 AQAIAAVNTIIRRP-------SDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
A +I AVNTI+ P +LIG NTD + + + DA G +P
Sbjct: 1367 AVSIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA--------GAYPAATPT 1418
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRG 391
++ G GG RA F +S G
Sbjct: 1419 TTSAGLVIGGGGTARAAIFALQSMG 1443
>gi|322436187|ref|YP_004218399.1| shikimate 5-dehydrogenase [Granulicella tundricola MP5ACTX9]
gi|321163914|gb|ADW69619.1| shikimate 5-dehydrogenase [Granulicella tundricola MP5ACTX9]
Length = 571
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 150/336 (44%), Gaps = 26/336 (7%)
Query: 77 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCE 135
GG Y+G LE L A + G VD EL+ A + + IVS + +
Sbjct: 81 GGRYKGSAASELEILVEAANSGFQIVDLELESAEALKSAGIDKIRATSAGLIVSWHDFEK 140
Query: 136 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--QVPIIAYSVGERGL 193
TP DL + +R+ D +K+V + +T+ ++ + + + I+ +G+ G+
Sbjct: 141 TP---DLDKVYARIAPFEPDFVKIVPTAQCLTDNVKLMRFIERMSDEASIVGVCMGDSGI 197
Query: 194 VSQLLSPKFNGALVYG--SLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHS 251
+S++L + + ++ G +L +TY++ ++A TKV+G+ PV S
Sbjct: 198 ISRVLGVRAGSTFTFAAATVGEETAPGQILARTLLETYRIAEVDAATKVYGVAGDPVNKS 257
Query: 252 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311
P++ N FR N +Y+ + D+ G S+ P+K+++M
Sbjct: 258 LSPLMMNTAFRRETVNAVYLALQATDVTDLVKLIQEIPIQGVSITMPHKQSIMAHLAHTD 317
Query: 312 PLAQAIAAVNTIIRRPSD----GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
PL+ I A NT++R P KL G+NTD + + ++ I+ +G K
Sbjct: 318 PLSAKIGACNTVLRVPPSAGEPAKLYGFNTDVQGILIPLQKRIELKGAKA---------- 367
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFGT 403
++ GAGG+ RA F + +GA V I + T
Sbjct: 368 ----LVLGAGGSARAAVFALRDKGAEVFILNRTLET 399
>gi|261200843|ref|XP_002626822.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis SLH14081]
gi|327507650|sp|C5JKE6.1|ARO1_AJEDS RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|239593894|gb|EEQ76475.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis SLH14081]
Length = 1597
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 172/385 (44%), Gaps = 46/385 (11%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIIASHHDPKGELSWANGS 1193
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV + + A + + + + VPIIA ++G++G +S++L
Sbjct: 1194 WIQFYNKALQYGDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDKGQLSRML 1253
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPIL 256
NG + S P P S R+ K + + +K F +I PV S+ P +
Sbjct: 1254 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKSKKFAVIGNPVSASRSPAM 1309
Query: 257 HNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 313
HN FR + Y + +D +KKF SPDF G S+ P K +M DE+ P
Sbjct: 1310 HNALFRQMGLPHTYGTLETEDPEIVKKFIR---SPDFGGASITIPLKLDIMPLLDEIAPE 1366
Query: 314 AQAIAAVNTIIRRP-------SDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
A +I AVNTI+ P +LIG NTD + + + DA G +P
Sbjct: 1367 AVSIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA--------GAYPAATPT 1418
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRG 391
++ G GG RA F +S G
Sbjct: 1419 TTSAGLVIGGGGTARAAIFALQSMG 1443
>gi|327351195|gb|EGE80052.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 1597
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 172/385 (44%), Gaps = 46/385 (11%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIIASHHDPKGELSWANGS 1193
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV + + A + + + + VPIIA ++G++G +S++L
Sbjct: 1194 WIQFYNKALQYGDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDKGQLSRML 1253
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPIL 256
NG + S P P S R+ K + + +K F +I PV S+ P +
Sbjct: 1254 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKSKKFAVIGNPVSASRSPAM 1309
Query: 257 HNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 313
HN FR + Y + +D +KKF SPDF G S+ P K +M DE+ P
Sbjct: 1310 HNALFRQMGLPHTYGTLETEDPEIVKKFIR---SPDFGGASITIPLKLDIMPLLDEIAPE 1366
Query: 314 AQAIAAVNTIIRRP-------SDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
A +I AVNTI+ P +LIG NTD + + + DA G +P
Sbjct: 1367 AVSIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA--------GAYPAATPT 1418
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRG 391
++ G GG RA F +S G
Sbjct: 1419 TTSAGLVIGGGGTARAAIFALQSMG 1443
>gi|258563398|ref|XP_002582444.1| pentafunctional AROM polypeptide [Uncinocarpus reesii 1704]
gi|327507674|sp|C4JYG6.1|ARO1_UNCRE RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|237907951|gb|EEP82352.1| pentafunctional AROM polypeptide [Uncinocarpus reesii 1704]
Length = 1580
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 173/383 (45%), Gaps = 42/383 (10%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + ++ P D + I+ ++ +P++ R K GG + D H
Sbjct: 1067 GSDAVELRVDLLVDPSSSSEMPSVDYVAEQISILRSRVSVPLVFTIRTKSQGGRFPDDAH 1126
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D G
Sbjct: 1127 NAALDLYRLAIRMGSEFVDLEVTFPEYVL--RAVTEMKGVSKIIASHHDVANRLSWRNGS 1184
Query: 145 LVS--RMQATGADIIKLVFSVNDITE-IA----RIFQLLSHCQVPIIAYSVGERGLVSQL 197
DIIKLV + + + IA +I+ +H +P+IA ++GERG +S++
Sbjct: 1185 WTQFYNKALQYGDIIKLVGIASQLDDNIALREFKIWAKKAH-DIPVIAINMGERGRLSRI 1243
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPI 255
L NG + S P P S ++ + + ++K F ++ KP+ S+ P
Sbjct: 1244 L----NGFMTPVSHPKLPFKAAPGQLSAKEIREGLSLMGEIESKKFAIVGKPISASRSPA 1299
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
LHN F V +Y + DD++ +PDF G S+ P K +M DE+ P A+
Sbjct: 1300 LHNALFADVGLPHVYGRLETDDVQNVKDLIHAPDFGGASITIPLKLDIMPLLDEIAPEAK 1359
Query: 316 AIAAVNTII---RRPSDGK----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ R P D K LIGYNTD + + + G ++ P G
Sbjct: 1360 VIGAVNTIVPAPREPGDVKKGPRLIGYNTDWQGMVQCL-----RHGGAVSPSTSNDPAPG 1414
Query: 369 RMFVLAGAGGAGRALAFGAKSRG 391
++ G GG RA S G
Sbjct: 1415 ---LVIGGGGTARAAIHALHSMG 1434
>gi|296813541|ref|XP_002847108.1| pentafunctional AROM polypeptide [Arthroderma otae CBS 113480]
gi|327507651|sp|C5FQ73.1|ARO1_ARTOC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238842364|gb|EEQ32026.1| pentafunctional AROM polypeptide [Arthroderma otae CBS 113480]
Length = 1571
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 169/388 (43%), Gaps = 35/388 (9%)
Query: 24 QVLSNMYQAKAEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRP 73
Q+ +++ +A G+D +E+R+D + + + + + + P++ R
Sbjct: 1064 QLSADILRAATFGSDAIELRVDLLKDPSSTSGVPSVGYVAEQMSFLRSHASQPLIFTIRT 1123
Query: 74 KWAGGLYEGDE-HKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
K GG + D K LE LA +G+++VD EL +++L + G I++ +
Sbjct: 1124 KAQGGQFPDDAVDKALELYKLAIRMGSEFVDLELSFPNDLL--HAVTEMKGFSKIIASHH 1181
Query: 133 DCETPSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAY 186
D + G + DIIKL+ + + Q S + VPIIA
Sbjct: 1182 DVNSQLSWSNGSWIQYYNKALQHGDIIKLIGVAKTFEDNMALQQFKSWAEKSYPVPIIAI 1241
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK 246
++G +G +S++L+ +F + + +L G + + +RQ + D K F L K
Sbjct: 1242 NMGNKGRLSRILN-RFMTPVSHPALPFKAAPGQVSAKDIRQALTLMG-ELDAKKFALFGK 1299
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
P+ S+ P LHN F + Y + D + S DF G SV P KE +M
Sbjct: 1300 PISASRSPALHNALFTQAGFPHDYGLLETDKAENVEKFIRSDDFGGASVTIPLKEQIMGL 1359
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDG---KLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
DE+ P A+ I AVNTI+ G +LIGYNTD + ++DA G
Sbjct: 1360 LDEISPEAKIIGAVNTIVPITVSGRPPRLIGYNTDWQGMARCLKDA--------GAICSN 1411
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ G + G+GG RA + S G
Sbjct: 1412 N---GESALTIGSGGTARAAIYSLHSMG 1436
>gi|330836654|ref|YP_004411295.1| 3-dehydroquinate dehydratase [Sphaerochaeta coccoides DSM 17374]
gi|329748557|gb|AEC01913.1| 3-dehydroquinate dehydratase [Sphaerochaeta coccoides DSM 17374]
Length = 485
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 165/344 (47%), Gaps = 14/344 (4%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
M+C L +++ + +S Y+ + VE+RLD + + + + + P+P+++
Sbjct: 1 MLCLTLTGRTLLENISQ-YERNKDWVGAVELRLDYLEESE-ARLAGSLPEQFPVPMILTC 58
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGA-DYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
R + GGL E KRL + D GA YVD E + + + + G R I S
Sbjct: 59 RRESDGGLCTSTERKRLSLMKEVLDRGAFAYVDLEDDLKKT--EAEQLARRKGIRIIRSH 116
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--QVPIIAYSV 188
+ P+ D+ ++R+ A G DI KL + + + ++ R+F++ I +
Sbjct: 117 HDFSGMPA--DIYARMARILAKG-DIPKLAVTPHTVEDVIRLFRIKDEIPGSTEKIVIGM 173
Query: 189 GERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISK 246
G G+ +++L K ++++ + + G+ + L + Y + ++A+T++FG+I
Sbjct: 174 GVLGIPTRILYRKIGSSMMFCCDEAAESVAPGMLSARVLSEVYGADKVDAETEIFGIIGN 233
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
PV S P++HNP FR + N IY VD ++ FF D GFSV P+K V+ +
Sbjct: 234 PVSQSASPLIHNPGFRAIKKNAIYSLFPVDAVRPFFRLADVLDIRGFSVTVPFKRDVIPY 293
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
+ + I + NT++R K G NTD ++ + AI
Sbjct: 294 LGTISREVKQIGSCNTVVRVKDLWK--GINTDYHGFLSQLMPAI 335
>gi|325090339|gb|EGC43649.1| 3-dehydroquinate synthase [Ajellomyces capsulatus H88]
Length = 1574
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 173/384 (45%), Gaps = 44/384 (11%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1055 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRASVPLVFTIRTKGQGGRFPDDAY 1114
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1115 DAALQLYRLAVRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIIASHHDPKGQLSWVNGS 1172
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV I + + + + + VPIIA ++G++G +S++L
Sbjct: 1173 WIQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNVPIIAINMGDKGQLSRML 1232
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYK----VEHINADTKVFGLISKPVGHSKGP 254
NG + S P P S R+ K + I A K F +I PV S+ P
Sbjct: 1233 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKA--KKFAVIGNPVSASRSP 1286
Query: 255 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
+HN FR + Y + D+ + SPDF G SV P K ++M DE+ P A
Sbjct: 1287 AMHNTLFRQMGLPHTYGTLETDNPEVAKEFIRSPDFGGASVTIPLKLSIMPLLDEIAPEA 1346
Query: 315 QAIAAVNTIIRRP--SDGK-----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
+I AVNTI+ P DGK LIG+NTD + + + DA TAS G
Sbjct: 1347 MSIGAVNTIVCAPPAPDGKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAG---- 1402
Query: 368 GRMFVLAGAGGAGRALAFGAKSRG 391
++ G GG RA F ++ G
Sbjct: 1403 ----LVIGGGGTARAAIFALQNMG 1422
>gi|327507647|sp|C6HCG7.1|ARO1_AJECH RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|240278751|gb|EER42257.1| pentafunctional AROM polypeptide [Ajellomyces capsulatus H143]
Length = 1595
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 173/384 (45%), Gaps = 44/384 (11%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1076 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRASVPLVFTIRTKGQGGRFPDDAY 1135
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1136 DAALQLYRLAVRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIIASHHDPKGQLSWVNGS 1193
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV I + + + + + VPIIA ++G++G +S++L
Sbjct: 1194 WIQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNVPIIAINMGDKGQLSRML 1253
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYK----VEHINADTKVFGLISKPVGHSKGP 254
NG + S P P S R+ K + I A K F +I PV S+ P
Sbjct: 1254 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKA--KKFAVIGNPVSASRSP 1307
Query: 255 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
+HN FR + Y + D+ + SPDF G SV P K ++M DE+ P A
Sbjct: 1308 AMHNTLFRQMGLPHTYGTLETDNPEVAKEFIRSPDFGGASVTIPLKLSIMPLLDEIAPEA 1367
Query: 315 QAIAAVNTIIRRP--SDGK-----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
+I AVNTI+ P DGK LIG+NTD + + + DA TAS G
Sbjct: 1368 MSIGAVNTIVCAPPAPDGKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAG---- 1423
Query: 368 GRMFVLAGAGGAGRALAFGAKSRG 391
++ G GG RA F ++ G
Sbjct: 1424 ----LVIGGGGTARAAIFALQNMG 1443
>gi|374313118|ref|YP_005059548.1| shikimate 5-dehydrogenase [Granulicella mallensis MP5ACTX8]
gi|358755128|gb|AEU38518.1| shikimate 5-dehydrogenase [Granulicella mallensis MP5ACTX8]
Length = 592
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 135/297 (45%), Gaps = 11/297 (3%)
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS-HQSGTR 125
V+ R K GG +EG L+ L A + G VD EL+ + ++G
Sbjct: 74 VIATCRCKENGGRFEGSNTGALDVLLKAAESGFQLVDIELEAIEKLPKTTMDRLREAGAA 133
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----V 181
I+S + + +DL + +R++ D IK+V + +++ + + L +
Sbjct: 134 VIISHH---DFHGTKDLDAVYNRIEPFAPDFIKVVPTAKSLSDNLTLMRFLERMEDRSKS 190
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTK 239
I+ +GE G++S++L + A + + G +L + Y+++ ++A TK
Sbjct: 191 SIVGICMGEAGIISRVLGLRAGSAFTFAAANAGEETAPGQIAARTLIEDYRIDQVDAATK 250
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
V+G+ P+ S P++ N FR N +Y+ + + F G SV P
Sbjct: 251 VYGVAGNPIRSSLSPLMMNTAFRRETVNAVYLALQATKVDDLFKLVREIPIQGLSVTMPL 310
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
KEA+M + PL+ I AVNT++ R DGK G+NTD + +E + +G K
Sbjct: 311 KEAIMPLLERTDPLSAKIGAVNTVL-RAQDGKFYGFNTDVAGIVGPLERRLSLKGAK 366
>gi|374315064|ref|YP_005061492.1| shikimate 5-dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
gi|359350708|gb|AEV28482.1| shikimate 5-dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
Length = 497
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 184/402 (45%), Gaps = 35/402 (8%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
M+C L ++E+ + + + + + + E+RLD +N + ++ + +PV++
Sbjct: 1 MLCLTLTGSTLEEDRALVVKNR-KWISLAELRLDYLNP-EEQEEAAVFPNMVDIPVILTL 58
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQ------SGTR 125
R GG E +RL+ L+ YVD E + L + S + S R
Sbjct: 59 RRVSDGGRCTLGEKQRLQLLYNTAKGDFAYVDIEEDIKKCDLKFKESGTEIKVDLESSLR 118
Query: 126 F----IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEIARIFQLLSH 178
I+ D E + G+ +S++ A G DI K+ S+ D+ + R+ Q L
Sbjct: 119 MRNIKIIRSYHDFEKVPADIYGH-ISKLAAKG-DIPKIAVTPKSMIDVISLFRVQQELQG 176
Query: 179 CQVPIIAYSVGERGLVSQLLSPKFNGALVY--GSLKGTPVLGLPTVESLRQTYKVEHINA 236
+ II +G+ G+ +++L K L + S + P G + +++ + Y+ + ++
Sbjct: 177 IKDKIII-GMGDFGIPTRILYKKCGSMLTFCTDSSEKVPAPGQLSAQTMSELYRSDKLDD 235
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
T ++G+I PV H+ P++HNP F ++YN +YVP VD ++ FF GFSV
Sbjct: 236 RTHIYGIIGNPVYHTSSPLIHNPGFLAIHYNAVYVPFLVDSVRAFFKLAEMLQIHGFSVT 295
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K V + + + I A NT+ R + K G NTD + I + + +
Sbjct: 296 VPHKRDVQPYLGRITREVKQIGACNTVTRIQNMWK--GTNTDYYGFLAPIAEEVSK---- 349
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
GT ++ GAGGA RA+ + + G +V + +
Sbjct: 350 -GTIHSA--------LVIGAGGASRAVIWALHNHGVKVTVIN 382
>gi|303317582|ref|XP_003068793.1| 3-dehydroquinate synthase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|327507658|sp|C5PA86.1|ARO1_COCP7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|240108474|gb|EER26648.1| 3-dehydroquinate synthase, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 1589
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 167/374 (44%), Gaps = 42/374 (11%)
Query: 36 GADVVEIRLDCINNFQPGKDL----------EIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + D+ ++ ++ LP++ R K GG + D H
Sbjct: 1071 GSDAVELRVDLLVDPSSANDIPSVDYVAEQISMLRSRVSLPLVFTIRTKSQGGRFPDDAH 1130
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE---TPSEED 141
L+ LA +G+++VD E+ +IL + + G I++ + D + +
Sbjct: 1131 DAALDLYRLAVRMGSEFVDLEVTFPEHIL--RAVTEMKGFSKIIASHHDVSGSLSWANGS 1188
Query: 142 LGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
G ++ G DIIKLV + + + + + Q +P+IA ++GE+G +S++
Sbjct: 1189 WGQFYNKALQYG-DIIKLVGVAKCLDDNIALRKFKTWAQDAHEIPVIAINMGEKGRLSRI 1247
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPI 255
L NG + S P P S + K + + + F + KPV S+ P
Sbjct: 1248 L----NGFMTPVSHPKLPFKAAPGQLSAQDIRKGLSLMGEIEPRKFAIFGKPVSASRSPA 1303
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN F V Y + D+++ +PDF G SV P K +M DE+ P AQ
Sbjct: 1304 MHNALFAQVGLPHAYSRLETDNVEDVREFIHAPDFGGASVTIPLKLDIMPLLDEISPEAQ 1363
Query: 316 AIAAVNTII---RRPSD----GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ R P D +LIGYNTD + + + R K + SF
Sbjct: 1364 VIGAVNTIVPIPRGPGDMTGYPRLIGYNTDWQGMVRCL------RHGKAISPSFADTAVP 1417
Query: 369 RMFVLAGAGGAGRA 382
+ + G GG RA
Sbjct: 1418 GLVI--GGGGTARA 1429
>gi|225873819|ref|YP_002755278.1| 3-dehydroquinate dehydratase [Acidobacterium capsulatum ATCC 51196]
gi|225794474|gb|ACO34564.1| 3-dehydroquinate dehydratase, type I domain/shikimate
5-dehydrogenase domain protein [Acidobacterium
capsulatum ATCC 51196]
Length = 800
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 178/395 (45%), Gaps = 26/395 (6%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG--KDLEIILTKKPLPVL 68
+ +C + A S ++++ +A E +E RLD + N + + + + +
Sbjct: 75 SRVCVAIAASSPDELIEKAREAAREN-PFLEFRLDYLPNPAAAISRIQQFLYELGEVTAI 133
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS-GTRFI 127
R + GG ++G ++ L A G D +D E++ A + + + +S G I
Sbjct: 134 ATCRREPNGGKFKGSIEAEIQILEKAIAAGCDLIDIEIETAEKLKAAELARIRSLGAALI 193
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ--VPIIA 185
+S + + + DL + ++Q D +K+V + + + + L ++
Sbjct: 194 ISYH---DFKATRDLDRMFEKIQRYSPDFVKMVSTATCLADNLAMMHFLERSSDAANVVG 250
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTV--ESLRQTYKVEHINADTKVFGL 243
+GE+GL+S++L + + S + G + +L + ++++ ++ T+V+G+
Sbjct: 251 ICMGEQGLISRVLGVRAGSVFTFASAQAGEETGPGQIAARTLHEIFRIDQVSPATRVYGV 310
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
+ PV HS P++HN FR N +++P+ + L G +V P+K +
Sbjct: 311 VGNPVMHSLSPLIHNLAFRRETVNAVFLPLQANTLSDVLRLVKEVPLHGLAVTMPFKGEI 370
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+K L++ I A NT++ R DG L G+NTD A + +E +
Sbjct: 371 LKHLTNTDALSEKIGACNTVV-RALDGNLYGFNTDVAAVVRPLERRL------------- 416
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL ++ GAGGA RA FG K +GA V I +
Sbjct: 417 -PLRDARVLVIGAGGAARAAVFGLKDKGADVTIVN 450
>gi|320038786|gb|EFW20721.1| 3-dehydroquinate synthase [Coccidioides posadasii str. Silveira]
Length = 1445
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 167/374 (44%), Gaps = 42/374 (11%)
Query: 36 GADVVEIRLDCINNFQPGKDL----------EIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + D+ ++ ++ LP++ R K GG + D H
Sbjct: 1071 GSDAVELRVDLLVDPSSANDIPSVDYVAEQISMLRSRVSLPLVFTIRTKSQGGRFPDDAH 1130
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE---TPSEED 141
L+ LA +G+++VD E+ +IL + + G I++ + D + +
Sbjct: 1131 DAALDLYRLAVRMGSEFVDLEVTFPEHIL--RAVTEMKGFSKIIASHHDVSGSLSWANGS 1188
Query: 142 LGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
G ++ G DIIKLV + + + + + Q +P+IA ++GE+G +S++
Sbjct: 1189 WGQFYNKALQYG-DIIKLVGVAKCLDDNIALRKFKTWAQDAHEIPVIAINMGEKGRLSRI 1247
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPI 255
L NG + S P P S + K + + + F + KPV S+ P
Sbjct: 1248 L----NGFMTPVSHPKLPFKAAPGQLSAQDIRKGLSLMGEIEPRKFAIFGKPVSASRSPA 1303
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN F V Y + D+++ +PDF G SV P K +M DE+ P AQ
Sbjct: 1304 MHNALFAQVGLPHAYSRLETDNVEDVREFIHAPDFGGASVTIPLKLDIMPLLDEISPEAQ 1363
Query: 316 AIAAVNTII---RRPSD----GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ R P D +LIGYNTD + + + R K + SF
Sbjct: 1364 VIGAVNTIVPIPRGPGDMTGYPRLIGYNTDWQGMVRCL------RHGKAISPSFADTAVP 1417
Query: 369 RMFVLAGAGGAGRA 382
+ + G GG RA
Sbjct: 1418 GLVI--GGGGTARA 1429
>gi|346976957|gb|EGY20409.1| pentafunctional AROM polypeptide [Verticillium dahliae VdLs.17]
Length = 1574
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 169/379 (44%), Gaps = 43/379 (11%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
G+D VE+R+D + + P + + + + +P++ R GG + ++H + +L+
Sbjct: 1071 GSDAVELRVDLLQDQTPESVARQVSALRSAAGMPIIFTLRTVSQGGRFPDEDHTQALSLY 1130
Query: 93 -LAEDLGADYVDFE-------LKVASNILGKQ--YSSHQSGTRFIVSCNLDCETPSEEDL 142
LA +G +++D E L+ +N+ G+ +SH R ++S TP
Sbjct: 1131 ILALRMGVEFIDLEMTWPEHILQTVTNLKGRSRIIASHHD-PRGVLSWKNGSWTP----- 1184
Query: 143 GYLVSRMQATGADIIKLV---FSVNDITEIARI-FQLLSHCQVPIIAYSVGERGLVSQLL 198
+R G+ +IKLV S+ D ++AR +L+ PIIA ++G G +S++L
Sbjct: 1185 --FYNRALQWGS-VIKLVGTAQSMEDNYDLARFKSDMLASHPTPIIALNMGALGKLSRVL 1241
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPIL 256
NG L S P P S + + + N D + F L KP+ S+ P L
Sbjct: 1242 ----NGFLTPVSHPALPFKAAPGQLSAAEIRRALFLLGNIDAQSFYLFGKPISKSRSPAL 1297
Query: 257 HNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316
HN F Y + D + + PDF G SV P K VM D+V A+
Sbjct: 1298 HNSLFDLTGLPHKYGLVETDQADEVAAVIREPDFGGASVTIPLKLDVMPLLDQVSESAKV 1357
Query: 317 IAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFV 372
I AVNTII P DG +L+G NTD + +E GT + + +
Sbjct: 1358 IGAVNTIIPIPLDGSQKRRLLGDNTDWRGMVHCLESIGVASESTAGTTTASA-------L 1410
Query: 373 LAGAGGAGRALAFGAKSRG 391
+ G+GG RA F KS G
Sbjct: 1411 VIGSGGTTRAAIFALKSHG 1429
>gi|302509946|ref|XP_003016933.1| repressor protein [Arthroderma benhamiae CBS 112371]
gi|291180503|gb|EFE36288.1| repressor protein [Arthroderma benhamiae CBS 112371]
Length = 1571
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 171/388 (44%), Gaps = 42/388 (10%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPKWAG 77
N+ QA + G+ VE+R+D + + + + + ++ LP++ R K G
Sbjct: 1066 NILQAASFGSHAVELRVDLLKDPSSTSAIPSISYVAEQISFLRSQASLPLIFTIRTKAQG 1125
Query: 78 GLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
GL+ + + L LA +G+++VD E+ N+L + G I++ + D
Sbjct: 1126 GLFPDSAVDEALGLYKLAIRMGSEFVDLEISFPDNLL--HAVTEIKGFSKIIASHHDVNG 1183
Query: 137 PSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGE 190
G + D+IKL+ + + + Q + + +PIIA ++G
Sbjct: 1184 QLSWSNGSWIQYYNKALQYGDVIKLIGVAKSLDDNLTLQQFKAWAERSYPIPIIAINMGN 1243
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKP 247
+G +S++L NG + S P P + + +RQ + D K F L KP
Sbjct: 1244 KGRLSRIL----NGFMTPVSHPALPFKAAPGQLSAKEIRQALTLMG-ELDAKEFALFGKP 1298
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
+ S+ P LHN F + Y + D+++ S +F G SV P KE +M+
Sbjct: 1299 ISASRSPALHNTLFAEAGFPHEYGRLETDNVEDVKEFIYSEEFGGASVTIPLKERIMELL 1358
Query: 308 DEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
DE+ P A+ I AVNTI+ +G KL+GYNTD + ++DA KNG ++
Sbjct: 1359 DEISPEAKIIGAVNTIVPVIEEGKATRKLVGYNTDWQGMARCLKDA-GAIYLKNGESA-- 1415
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ G+GG RA + S G
Sbjct: 1416 --------LTIGSGGTARAAVYSLHSMG 1435
>gi|302663763|ref|XP_003023519.1| repressor protein [Trichophyton verrucosum HKI 0517]
gi|291187522|gb|EFE42901.1| repressor protein [Trichophyton verrucosum HKI 0517]
Length = 1600
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 171/388 (44%), Gaps = 42/388 (10%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPKWAG 77
N+ QA + G+ VE+R+D + + + + + ++ LP++ R K G
Sbjct: 1066 NILQAASFGSHAVELRVDLLKDPSSTSAIPSISYVAEQISFLRSQVSLPLIFTIRTKAQG 1125
Query: 78 GLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
GL+ + L+ LA +G+++VD E+ N+L + G I++ + D
Sbjct: 1126 GLFPDNAVDEALGLYKLAIRMGSEFVDLEISFPDNLL--HAVTEIKGFSKIIASHHDVNG 1183
Query: 137 PSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGE 190
G + D+IKL+ + + + Q + + +PIIA ++G
Sbjct: 1184 QLSWSNGSWIQYYNKALQYGDVIKLIGVAKSLDDNLTLQQFKAWAERSYPIPIIAINMGN 1243
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKP 247
+G +S++L NG + S P P + + +RQ + D K F L KP
Sbjct: 1244 KGRLSRIL----NGFMTPVSHPALPFKAAPGQLSAKEIRQALTLMG-ELDAKEFALFGKP 1298
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
+ S+ P LHN F + Y + D+++ S +F G SV P KE +M+
Sbjct: 1299 ISASRSPALHNTLFAEAGFPHEYGRLETDNVEDVKEFIYSEEFGGASVTIPLKERIMELL 1358
Query: 308 DEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
DE+ P A+ I AVNTI+ +G KL+GYNTD + ++DA KNG ++
Sbjct: 1359 DEISPEAKIIGAVNTIVPIIEEGKATRKLVGYNTDWQGMARCLKDA-GAIYLKNGESA-- 1415
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ G+GG RA + S G
Sbjct: 1416 --------LTIGSGGTARAAVYSLHSMG 1435
>gi|392870671|gb|EAS32492.2| pentafunctional AROM polypeptide [Coccidioides immitis RS]
Length = 1589
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 167/374 (44%), Gaps = 42/374 (11%)
Query: 36 GADVVEIRLDCINNFQPGKDL----------EIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + D+ ++ ++ LP++ R K GG + D H
Sbjct: 1071 GSDAVELRVDLLVDPSSANDIPSVDYVAEQISMLRSRVSLPLVFTIRTKSQGGRFPDDAH 1130
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE---TPSEED 141
L+ LA +G+++VD E+ ++L + + G I++ + D + +
Sbjct: 1131 DAALDLYRLAVRMGSEFVDLEVTFPEHML--RAVTEMKGFSKIIASHHDVSGSLSWANGS 1188
Query: 142 LGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
G ++ G DIIKLV + + + + + Q +P+IA ++GE+G +S++
Sbjct: 1189 WGQFYNKALQYG-DIIKLVGVAKCLDDNIALRKFKTWAQDAREIPVIAINMGEKGRLSRI 1247
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPI 255
L NG + S P P S + K + + + F + KPV S+ P
Sbjct: 1248 L----NGFMTPVSHPKLPFKAAPGQLSAQDIRKGLSLMGEIEPRKFAIFGKPVSASRSPT 1303
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN F V Y + D+++ +PDF G SV P K +M DE+ P AQ
Sbjct: 1304 MHNALFAQVGLPHAYSRLETDNVEDVREFIHAPDFGGASVTIPLKLDIMPLLDEISPEAQ 1363
Query: 316 AIAAVNTII---RRPSD----GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ R P D +LIGYNTD + + + R K + SF
Sbjct: 1364 VIGAVNTIVPIPRGPGDMTGHPRLIGYNTDWQGMVRCL------RRGKAISPSFADTAVP 1417
Query: 369 RMFVLAGAGGAGRA 382
+ + G GG RA
Sbjct: 1418 GLVI--GGGGTARA 1429
>gi|119186687|ref|XP_001243950.1| hypothetical protein CIMG_03391 [Coccidioides immitis RS]
Length = 1543
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 167/374 (44%), Gaps = 42/374 (11%)
Query: 36 GADVVEIRLDCINNFQPGKDL----------EIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + D+ ++ ++ LP++ R K GG + D H
Sbjct: 1025 GSDAVELRVDLLVDPSSANDIPSVDYVAEQISMLRSRVSLPLVFTIRTKSQGGRFPDDAH 1084
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE---TPSEED 141
L+ LA +G+++VD E+ ++L + + G I++ + D + +
Sbjct: 1085 DAALDLYRLAVRMGSEFVDLEVTFPEHML--RAVTEMKGFSKIIASHHDVSGSLSWANGS 1142
Query: 142 LGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
G ++ G DIIKLV + + + + + Q +P+IA ++GE+G +S++
Sbjct: 1143 WGQFYNKALQYG-DIIKLVGVAKCLDDNIALRKFKTWAQDAREIPVIAINMGEKGRLSRI 1201
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPI 255
L NG + S P P S + K + + + F + KPV S+ P
Sbjct: 1202 L----NGFMTPVSHPKLPFKAAPGQLSAQDIRKGLSLMGEIEPRKFAIFGKPVSASRSPT 1257
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN F V Y + D+++ +PDF G SV P K +M DE+ P AQ
Sbjct: 1258 MHNALFAQVGLPHAYSRLETDNVEDVREFIHAPDFGGASVTIPLKLDIMPLLDEISPEAQ 1317
Query: 316 AIAAVNTII---RRPSD----GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ R P D +LIGYNTD + + + R K + SF
Sbjct: 1318 VIGAVNTIVPIPRGPGDMTGHPRLIGYNTDWQGMVRCL------RRGKAISPSFADTAVP 1371
Query: 369 RMFVLAGAGGAGRA 382
+ + G GG RA
Sbjct: 1372 GLVI--GGGGTARA 1383
>gi|327507646|sp|C0NL63.1|ARO1_AJECG RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|225560322|gb|EEH08604.1| pentafunctional AROM polypeptide [Ajellomyces capsulatus G186AR]
Length = 1595
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 172/384 (44%), Gaps = 44/384 (11%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1076 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRTSVPLVFTIRTKGQGGRFPDDAY 1135
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1136 DAALQLYRLAVRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIITSHHDPKGQLSWVNGS 1193
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV I + + + + + VPIIA ++G++G +S++L
Sbjct: 1194 WIQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNVPIIAINMGDKGQLSRML 1253
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYK----VEHINADTKVFGLISKPVGHSKGP 254
NG + S P P S R+ K + I A K F +I PV S+ P
Sbjct: 1254 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKA--KKFAVIGNPVSASRSP 1307
Query: 255 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
+HN FR + Y + D+ + SP F G SV P K ++M DE+ P A
Sbjct: 1308 AMHNTLFRQMGLPHTYGTLETDNPEVAKEFIRSPGFGGASVTIPLKISIMPLLDEIAPEA 1367
Query: 315 QAIAAVNTIIRRP--SDGK-----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
+I AVNTI+ P DGK LIG+NTD + + + DA TAS G
Sbjct: 1368 MSIGAVNTIVCAPPAPDGKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAG---- 1423
Query: 368 GRMFVLAGAGGAGRALAFGAKSRG 391
++ G GG RA F ++ G
Sbjct: 1424 ----LVIGGGGTARAAIFALQNMG 1443
>gi|33236917|gb|AAP99004.1| shikimate 5-dehydrogenase [Chlamydophila pneumoniae TW-183]
Length = 503
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 28/339 (8%)
Query: 10 TTMICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ M+CA P ++ +Q+L +++ D++E+RLD IN ++L ++T
Sbjct: 25 SVMLCATVSGPSFCEAKQQILKSLHLV-----DIIELRLDLINELD-DQELHTLITTAQN 78
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P+L + K E ++ L+ L ++D ++ + L SH +
Sbjct: 79 PILTFRQHK------EMSTALWIQKLYSLAKLEPKWMDIDVSLPKTALQTIRKSH-PKIK 131
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
I+S + D EDL + + M AT A+I K+V S + +E + P
Sbjct: 132 LILSYHTD----KNEDLDAIYNEMLATPAEIYKIVLSPENSSEALNYIKKARLLPKPSTV 187
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+G GL S++LSP + A+ Y + P + G P +E L +Y ++ + ++GL
Sbjct: 188 LCMGTHGLPSRVLSPLISNAMNYAAGISAPQVAPGQPKLEELL-SYNYSKLSEKSHIYGL 246
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
I PV S + HN ++ N Y+ P+ + ++ FFS F+G SV P K
Sbjct: 247 IGDPVDRSISHLSHNFLLSKLSLNATYIKFPVTIGEVVTFFSAIRDLPFSGLSVTMPLKT 306
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCE 340
A+ D + AQ ++NT++ R + K++GYNTD E
Sbjct: 307 AIFDHVDALDASAQLCESINTLVFR--NQKILGYNTDGE 343
>gi|384449779|ref|YP_005662381.1| shikimate dehydrogenase [Chlamydophila pneumoniae LPCoLN]
gi|269302837|gb|ACZ32937.1| shikimate dehydrogenase family protein [Chlamydophila pneumoniae
LPCoLN]
Length = 477
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 157/337 (46%), Gaps = 28/337 (8%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
M+CA P ++ +Q+L +++ D++E+RLD IN ++L ++T P+
Sbjct: 1 MLCATVSGPSFCEAKQQILKSLHLV-----DIIELRLDLINELD-DQELHTLITTAQNPI 54
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L + K E ++ L+ L ++D ++ + L SH + I
Sbjct: 55 LTFRQHK------EMSTALWIQKLYSLAKLEPKWMDIDVSLPKTALQTIRKSH-PKIKLI 107
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
+S + D EDL + + M AT A+I K+V S + +E + P
Sbjct: 108 LSYHTD----KNEDLDAIYNEMLATPAEIYKIVLSPENSSEALNYIKKARLLPKPSTVLC 163
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+G GL S++LSP + A+ Y + P + G P +E L +Y ++ + ++GLI
Sbjct: 164 MGTHGLPSRVLSPLISNAMNYAAGISAPQVAPGQPKLEELL-SYNYSKLSEKSHIYGLIG 222
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
PV S + HN ++ N Y+ P+ + ++ FFS F+G SV P K A+
Sbjct: 223 DPVDRSISHLSHNFLLSKLSLNATYIKFPVTIGEVVTFFSAIRDLPFSGLSVTMPLKTAI 282
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCE 340
D + AQ ++NT++ R + K++GYNTD E
Sbjct: 283 FDHVDALDASAQLCESINTLVFR--NQKILGYNTDGE 317
>gi|15618943|ref|NP_225229.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila pneumoniae CWL029]
gi|15836566|ref|NP_301090.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila pneumoniae J138]
gi|16751990|ref|NP_445356.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila pneumoniae AR39]
gi|161484681|ref|NP_877347.2| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila pneumoniae TW-183]
gi|9087140|sp|Q9Z6M4.1|ARODE_CHLPN RecName: Full=Shikimate biosynthesis protein AroDE; Includes:
RecName: Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; AltName: Full=Type I DHQase;
Includes: RecName: Full=Shikimate dehydrogenase
gi|4377368|gb|AAD19172.1| Shikimate 5-Dehyrogenase [Chlamydophila pneumoniae CWL029]
gi|7189731|gb|AAF38612.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pneumoniae AR39]
gi|8979408|dbj|BAA99242.1| shikimate 5-dehydrogenase [Chlamydophila pneumoniae J138]
Length = 477
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 157/337 (46%), Gaps = 28/337 (8%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
M+CA P ++ +Q+L +++ D++E+RLD IN ++L ++T P+
Sbjct: 1 MLCATVSGPSFCEAKQQILKSLHLV-----DIIELRLDLINELD-DQELHTLITTAQNPI 54
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L + K E ++ L+ L ++D ++ + L SH + I
Sbjct: 55 LTFRQHK------EMSTALWIQKLYSLAKLEPKWMDIDVSLPKTALQTIRKSH-PKIKLI 107
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
+S + D EDL + + M AT A+I K+V S + +E + P
Sbjct: 108 LSYHTD----KNEDLDAIYNEMLATPAEIYKIVLSPENSSEALNYIKKARLLPKPSTVLC 163
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+G GL S++LSP + A+ Y + P + G P +E L +Y ++ + ++GLI
Sbjct: 164 MGTHGLPSRVLSPLISNAMNYAAGISAPQVAPGQPKLEELL-SYNYSKLSEKSHIYGLIG 222
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
PV S + HN ++ N Y+ P+ + ++ FFS F+G SV P K A+
Sbjct: 223 DPVDRSISHLSHNFLLSKLSLNATYIKFPVTIGEVVTFFSAIRDLPFSGLSVTMPLKTAI 282
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCE 340
D + AQ ++NT++ R + K++GYNTD E
Sbjct: 283 FDHVDALDASAQLCESINTLVFR--NQKILGYNTDGE 317
>gi|330444737|ref|YP_004377724.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pecorum E58]
gi|328807847|gb|AEB42020.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pecorum E58]
Length = 480
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 171/398 (42%), Gaps = 41/398 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
++CA P +Q+ +Q+L ++ D +E+R+D ++ P L +L P+
Sbjct: 4 LLCATINGPTFSQAKQQILDSL-----PFVDSIELRVDSLSTLSPSA-LSFLLAMAKAPI 57
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L +P+ GL +++ +L L Y+D +++ + L K S+
Sbjct: 58 LTYKKPQ---GLSSSAWVEKILSL---AALSPTYLDVDIQFPQDALRKIRLSYPD----- 106
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
+ L T + ED ++ +M +T A K+V + R A
Sbjct: 107 IKIILSHHTETYEDPHHIYHKMHSTPAHYYKIVTYSETPLQTLRFVHAARSLPPQATALC 166
Query: 188 VGERGLVSQLLSPKFNGALVY--GSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLIS 245
+GE L S++LSP A+ Y G G P ++ L Y ++++ + +++ LI
Sbjct: 167 LGEHSLASRVLSPLMGNAMNYAAGRHASPAAPGQPHLDDLL-AYNYKNLSQEAEIYALIG 225
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
PV S I HN F + Y+ P+ + L +FF + F G SV P K V
Sbjct: 226 NPVDRSPSHITHNKFFSKLLIKASYIKIPLSPEQLTEFFIILRTLPFRGLSVTMPLKVPV 285
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
M + D + P AQ AVNTI+ + L GYNTD + + + + G A
Sbjct: 286 MDYMDILDPSAQLCGAVNTILFH--EDVLYGYNTDGQGAFNLL--------VRKGVA--- 332
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
+ + + GAGGA R+LA GA + IF+ F
Sbjct: 333 --IKNKHVAILGAGGAARSLAVTLAHHGAYIHIFNRTF 368
>gi|222618472|gb|EEE54604.1| hypothetical protein OsJ_01835 [Oryza sativa Japonica Group]
Length = 176
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 72/109 (66%)
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP W GG YEGD+ R EAL LA +LG +YVD ELKVA + Y S + IVS +
Sbjct: 4 RPNWEGGQYEGDDATRFEALRLAMELGVNYVDIELKVADKFISFIYGSKPEKCKLIVSAH 63
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
TPS E+L LV+R+QA GADI+K+ + NDI +++++FQ++ HCQ
Sbjct: 64 NYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQ 112
>gi|218779608|ref|YP_002430926.1| shikimate 5-dehydrogenase [Desulfatibacillum alkenivorans AK-01]
gi|218760992|gb|ACL03458.1| shikimate 5-dehydrogenase [Desulfatibacillum alkenivorans AK-01]
Length = 274
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 16/166 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAG 292
IN+ T+++ + PV HS P +HN F H+ N Y+ V D++ + D G
Sbjct: 4 EINSLTRLYAVFGDPVAHSLSPAMHNRAFTHIGENAAYMAFRVKDVQGAVRAIRAFDMGG 63
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
SV P+K +VM+ DEV A+A+ AVNTI+ G+LIG N+DC ++ AI++
Sbjct: 64 ASVTIPHKISVMEHLDEVDETARAMGAVNTIVN--DQGRLIGKNSDCLGAVKAIQEK--- 118
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
+P+ G+ V+ GAGGA RA+ +G K GARV I +
Sbjct: 119 -----------TPVKGKDVVVIGAGGAARAVIYGLKQEGARVTIVN 153
>gi|327302676|ref|XP_003236030.1| 3-dehydroquinate synthase [Trichophyton rubrum CBS 118892]
gi|326461372|gb|EGD86825.1| 3-dehydroquinate synthase [Trichophyton rubrum CBS 118892]
Length = 1570
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 170/385 (44%), Gaps = 36/385 (9%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPKWAG 77
N+ Q + G+ VE+R+D + + + + + ++ LP++ R K G
Sbjct: 1066 NILQRASFGSHAVELRVDLLKDPTSTSAIPSINYVAEQISFLRSQVSLPLIFTIRTKAQG 1125
Query: 78 GLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
GL+ + L+ LA +G+D++D E+ N+L + G I++ + D
Sbjct: 1126 GLFPDNAVDEALGLYKLAIRMGSDFIDLEISFPDNLL--HAVTEIKGYSKIIASHHDVNG 1183
Query: 137 PSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGE 190
G + D+IKL+ + + + Q + + +P+IA ++G
Sbjct: 1184 QLSWSNGSWIQYYNKALQYGDVIKLIGVAESLDDNLALQQFKAWAERSYPIPMIAINMGN 1243
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGH 250
+G +S++L+ +F + + +L G + + +RQ + D K F L KP+
Sbjct: 1244 KGRLSRILN-RFMTPVSHPALPFKAAPGQLSAKEIRQALTLMG-ELDAKEFALFGKPISA 1301
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310
S+ P LHN F + Y + D+++ + S +F G SV P KE +M+ DE+
Sbjct: 1302 SRSPALHNTLFAEAGFPHEYGRLETDNVEDVKESIYSEEFGGASVTIPLKERIMELLDEI 1361
Query: 311 HPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
P A+ I AVNTI+ +G KL+GYNTD + ++DA G
Sbjct: 1362 SPEAKIIGAVNTIVPIVEEGKATRKLVGYNTDWQGMARCLKDA--------GAIYLKK-- 1411
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRG 391
G + G+GG RA + S G
Sbjct: 1412 -GESALTIGSGGTARAAIYSLHSMG 1435
>gi|338176104|ref|YP_004652914.1| shikimate biosynthesis protein AroDE [Parachlamydia acanthamoebae
UV-7]
gi|336480462|emb|CCB87060.1| shikimate biosynthesis protein AroDE [Parachlamydia acanthamoebae
UV-7]
Length = 674
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 147/317 (46%), Gaps = 14/317 (4%)
Query: 37 ADVVEIRLDCINNFQPGKDLEI--ILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLA 94
AD+VE+RLD N LE+ I + +P++ R + GG + E R+E ++
Sbjct: 25 ADLVELRLDLFVNVDETSLLELKSIFS---IPMIFTLRSQAQGGNFNQSEESRVEHIYRL 81
Query: 95 EDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA 154
L Y+D E + +++ + SS + I+S + ETP E+ +L + MQ A
Sbjct: 82 AALKPFYLDLESHMPEDVV-RDISSLHPEIQLILSYHNLQETP--ENFDHLYADMQKIPA 138
Query: 155 DIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT 214
K+ + + R+ + +I S+G G +S++L P N + SL
Sbjct: 139 HFYKIAVTAKSSVDTMRLLVWSKNQNAKLIPISMGPNGQISRILGPIVNHPFTFASLDED 198
Query: 215 PV--LGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV- 271
P LG + + L + Y+ + + T ++GLI PV S HN + +YV
Sbjct: 199 PKNPLGQLSAKLLIEQYRYRTLTSQTAIYGLIGDPVNLSISDETHNAVLAACGMDAVYVK 258
Query: 272 -PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG 330
P+ +L F + G SV P K+++M F D + A+ I AVNT+ + +
Sbjct: 259 IPVKSTELSPFLELAKALPIRGLSVTMPLKKSIMSFIDHLDVKAEKIGAVNTL--QFKED 316
Query: 331 KLIGYNTDCEASITAIE 347
++ G+NTD ++ A+E
Sbjct: 317 QIYGFNTDGMGAMEALE 333
>gi|50555858|ref|XP_505337.1| YALI0F12639p [Yarrowia lipolytica]
gi|74632651|sp|Q6C1X5.1|ARO1_YARLI RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|49651207|emb|CAG78144.1| YALI0F12639p [Yarrowia lipolytica CLIB122]
Length = 1556
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 174/408 (42%), Gaps = 70/408 (17%)
Query: 25 VLSNMYQAKAEGADVVEIRLDCINNFQ---PGKD-----LEIILTKKPLPVLIVYRPKWA 76
+ + M + +EG +E+R+D +N P ++ L I+ LP+L R K
Sbjct: 1057 IAATMLPSLSEGCSALELRVDLLNENDEAIPSEEYVLSQLAILRQNVDLPILYTVRTKAQ 1116
Query: 77 GGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILG---------KQYSSHQSGTRF 126
GG + D+ L L +L + +D EL + ++ K SH
Sbjct: 1117 GGRFPDDKPVELANLVNLGLKTAVELLDVELTYPAELVSSVGASRGYTKLLGSHHDFPGA 1176
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV-----FSVNDITEIARIFQLLSHCQV 181
+ +L+ E + +R +A D++KLV FS N E R +H
Sbjct: 1177 LNWSSLEWEN--------MYARAEAVPVDVVKLVGMAKSFSDNFALENFR----EAHTSS 1224
Query: 182 PIIAYSVGERGLVSQ----LLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHI 234
P++A ++G G +S+ LL+P + L PV P +VE + QT +
Sbjct: 1225 PLLAINMGSHGQLSRVTNTLLTPVTHADL--------PVAAAPGQLSVEEINQTRSTIGM 1276
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST----YSSPDF 290
F ++ P+GHSK PILHN F+ + Y DD + + +
Sbjct: 1277 FNKNLSFFIVGTPIGHSKSPILHNTMFKKLGLPYEYSRFKTDDAAAVNAKARALLAQGNL 1336
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G SV P K+ ++ F DEV PLAQ I AVNTII P +G L G NTD
Sbjct: 1337 GGISVTIPLKQDIIPFLDEVSPLAQQIGAVNTIIPGP-NGTLKGDNTDI----------- 1384
Query: 351 KERGYKNGTASFGS-PLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVI 396
G N FG+ L + ++ GAGG A G +S G A+++I
Sbjct: 1385 --LGLVNALTRFGANSLDKKTALIVGAGGTSLAAVHGLRSLGFAKILI 1430
>gi|328857285|gb|EGG06402.1| hypothetical protein MELLADRAFT_74837 [Melampsora larici-populina
98AG31]
Length = 1581
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 172/386 (44%), Gaps = 46/386 (11%)
Query: 26 LSNMYQAKAEGADVVEIRLDCINNFQPG-------------KDLEIILTKKPLPVLIVYR 72
LSN Q G D VE+R+D +++ + + + LP++ R
Sbjct: 1083 LSNFNQLTT-GCDAVELRVDLLSSAGKTPQASTVPSLHFIRRQVAALRRLTTLPIIFTVR 1141
Query: 73 PKWAGGLY--EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
GG + +G E + E L L G +YVD EL + ++ +Q + + G ++
Sbjct: 1142 TDGQGGKFPGQGSEKEYFELLELGLRTGCEYVDVELGHSPELI-RQLGAKK-GHSLLIGS 1199
Query: 131 NLDCETPSEEDLGYLVSRMQATG--ADIIKLVFSVNDITE-IARIFQLLSHCQV---PII 184
D + + S+ QA ADI+KLV + + +A + +H P+I
Sbjct: 1200 YHDFAGKLSWNSKEMESKYQAIRKYADIVKLVTVAKSMDDNLALLNFRATHSSTSFPPLI 1259
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKV--EHINADTKVFG 242
++G G +S++LSP + L + L G T ++Q + +H ++ F
Sbjct: 1260 TINMGLEGQMSRILSPVLS-PLTHELLPEPAAPGQLTYNQIQQALDLLGQH---PSRQFW 1315
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNG-IYVPMFVDDLKK--FFSTYSSPDFAGFSVGFPY 299
L P+GHS+ P++HN +F ++ +Y PM D L K + +PDF G SV P
Sbjct: 1316 LFGNPIGHSRSPLMHNTSFEALSLRSHVYSPMETDTLDKESVKAVLRAPDFGGASVTIPL 1375
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
K V+ DE+ A+ + AVNTIIRR KLIG NTD A T I ++ T
Sbjct: 1376 KLEVLSLMDELTDEAREVGAVNTIIRR--GDKLIGDNTDWYAIATLIRRSLPADPTVRAT 1433
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAF 385
A ++ GAGG RA +
Sbjct: 1434 A-----------LVVGAGGTSRAAVY 1448
>gi|384107652|ref|ZP_10008550.1| Shikimate 5-dehydrogenase [Treponema sp. JC4]
gi|383870508|gb|EID86110.1| Shikimate 5-dehydrogenase [Treponema sp. JC4]
Length = 498
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 170/359 (47%), Gaps = 36/359 (10%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL----PV 67
+IC L +++E+ + + Q + DV+E+R D ++ ++ ++++ K P P
Sbjct: 5 LICMTLTGKTIEEDI-KLSQKYEKFCDVLELRADHLD-----ENEQLLIRKFPALVKKPC 58
Query: 68 LIVYRPKWAGGLYEGDEHKRL----EALHLAE---DLGADYVDFELKVASNILGKQYSSH 120
++ R GGL+ G++ R AL A+ YVDFE +I Q ++
Sbjct: 59 ILTIRRDSDGGLWTGNDFSRTNLFGRALAFADPDKKRNFAYVDFEEDY--HIPSIQDAAM 116
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQ---LLS 177
G R I SC+ T +L M+ TG +I K+ F ++++ +F L++
Sbjct: 117 AFGVRIIRSCH--NMTEPIHNLRKRCDAMRKTGYEIPKIAFMPKTLSDVVNLFHESSLMT 174
Query: 178 HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLK----GTPVLGLPTVESLRQTYKVEH 233
+ ++A +G G+ S++L+ N + Y S + T +G L Y +
Sbjct: 175 NYDHILVA--MGAEGMPSRILTSISNSYMTYTSPQETADKTASIGHIDPVVLNDLYNFKG 232
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T++FG+ P+ + P +HN +RH + +Y P+ + + + D G
Sbjct: 233 ISKSTQLFGITGWPLVKTSSPEIHNMGYRHHGIDAVYFPIRSQLISESLNFAEQLDVKGM 292
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
SV P+KE+V+ + E+ P I A NT++R+ + K IGYNTDC T E A+ E
Sbjct: 293 SVTIPFKESVLYYLHELSPEVMQIGACNTVVRK--NYKWIGYNTDC----TGFERALLE 345
>gi|302418918|ref|XP_003007290.1| pentafunctional AROM polypeptide [Verticillium albo-atrum VaMs.102]
gi|327507675|sp|C9SE96.1|ARO1_VERA1 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|261354892|gb|EEY17320.1| pentafunctional AROM polypeptide [Verticillium albo-atrum VaMs.102]
Length = 1574
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 169/375 (45%), Gaps = 35/375 (9%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
G+D VE+R+D + + P + + + + +P++ R GG + +H + +L+
Sbjct: 1071 GSDAVELRVDLLQDQTPESVARQVSALRSAAGMPIIFTLRTVSQGGCFPDADHTQALSLY 1130
Query: 93 -LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLV---SR 148
LA +G +++D E+ +IL Q ++ G I++ + D G +R
Sbjct: 1131 ILALRMGVEFIDLEMTWPEHIL--QTVTNLKGRSRIIASHHDPRGELSWKNGSWTPFYNR 1188
Query: 149 MQATGADIIKLV---FSVNDITEIARI-FQLLSHCQVPIIAYSVGERGLVSQLL----SP 200
G+ +IKLV S+ D ++AR +L+ P+IA ++G G +S++L +P
Sbjct: 1189 ALQWGS-VIKLVGTAQSMEDNYDLARFKSDMLASHPTPVIALNMGALGKLSRVLNGFLTP 1247
Query: 201 KFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPT 260
+ AL + + G L E R + + +INA + F L KP+ S+ P LHN
Sbjct: 1248 VSHPALPFKAAPGQ----LSAAEIRRALFLLGNINAQS--FHLFGKPISKSRSPALHNSL 1301
Query: 261 FRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAV 320
F Y + D + + PDF G SV P K VM DEV A+ I AV
Sbjct: 1302 FNLTGLPHKYGLVETDQADEVAAVIREPDFGGASVTIPLKLDVMPLLDEVSESAKVIGAV 1361
Query: 321 NTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGA 376
NTII P DG +L+G NTD + +E + + ++ G+
Sbjct: 1362 NTIIPMPLDGSQKRRLLGDNTDWRGMVHCLESI-------GVASESTASTTTASALVIGS 1414
Query: 377 GGAGRALAFGAKSRG 391
GG RA F KS G
Sbjct: 1415 GGTTRAAIFALKSHG 1429
>gi|62185307|ref|YP_220092.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila abortus S26/3]
gi|424825347|ref|ZP_18250334.1| bifunctional 3-dehydroquinate dehydrogenase/shikimate dehydrogenase
protein [Chlamydophila abortus LLG]
gi|62148374|emb|CAH64141.1| shikimate 5-dehydrogenase [Chlamydophila abortus S26/3]
gi|333410446|gb|EGK69433.1| bifunctional 3-dehydroquinate dehydrogenase/shikimate dehydrogenase
protein [Chlamydophila abortus LLG]
Length = 477
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 172/396 (43%), Gaps = 43/396 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+DC+ + + ++ L KKP+
Sbjct: 1 MLCATISGPTFAEAKQQLLHSL-----PLVDSIELRIDCLLSLSSNELKHLVSLAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R L LAE L +Y+D + L K ++
Sbjct: 56 TL-----RKHTSLSEIAWIER--TLQLAE-LQPEYLDIDKDFPKEALAKIQKNYPK---- 103
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
+ L + + E + L M A K+ + T+ R Q+ H
Sbjct: 104 -IKIILSYHSETSEHIPNLCKEMLRQQAHHYKIAITSTKSTDTLRCIQIKKHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++A+ +++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGIHAPKVAPGQLSIEDLL-AYNYTNLSAEARIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K A
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLAPYELNEFFSLTRDLPFGGLSVTMPFKTA 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ + K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFH--NNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL + G+GGA +A+A GA++ IF+
Sbjct: 327 NIPLQNMHVGIVGSGGAAKAIATTFAYSGAQISIFN 362
>gi|302309374|ref|NP_986731.2| AGR066Wp [Ashbya gossypii ATCC 10895]
gi|327507749|sp|Q74ZZ1.2|ARO1_ASHGO RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|299788329|gb|AAS54555.2| AGR066Wp [Ashbya gossypii ATCC 10895]
Length = 1577
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 179/408 (43%), Gaps = 68/408 (16%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAE--GADVVEIRLDCINNFQPG---KDLEII-LT 61
K +T +C + + +L M + K G + VE+R+D + N+ K L + L
Sbjct: 1065 KRSTFVCL-----TFQNLLPEMERIKEAVYGCEAVEVRVDHLENYSQDFVLKQLTALRLA 1119
Query: 62 KKPLPVLIVYRPKWAGGLYEGDEHKRLE-ALHLAEDLGADYVDFELKVAS----NILGKQ 116
LP++ R K GG + +++ LE L + G +++D EL + S IL K+
Sbjct: 1120 TDSLPIVFTIRTKKQGGKFLDNDYSTLEDLLTVGLKAGVEFLDLELTLPSPIHQRILNKR 1179
Query: 117 YSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL 176
Y + G+ S E P E + ++ A D IK V + + + +
Sbjct: 1180 YKTRIIGSHHDFSGEFSWEHPEWE---HRYAQALAMQVDAIKFVATAKGFGDNLSLEEFR 1236
Query: 177 S-HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235
S H P+IA ++ E G +S++L N L + P P +LRQ + +
Sbjct: 1237 SKHTDKPLIAINMRECGKLSRVL----NTILTPITSDVLPQAAAPGQLTLRQ---INELY 1289
Query: 236 ADT-----KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--------LKKFF 282
A K ++ P+GHS+ PILHN YN + +P D +KK
Sbjct: 1290 ASIGGLRPKKMFVVGSPIGHSRSPILHN-----TGYNSLGLPYTFDKFETDSAEIVKK-- 1342
Query: 283 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 342
S S D G +V P K+ +M++ DE+ A+ I AVNTII + DG+ IG+NTD
Sbjct: 1343 SLLSREDLGGIAVTIPLKQDIMQYLDELTDSAKCIGAVNTIIPK-KDGRFIGHNTDW--- 1398
Query: 343 ITAIEDAIKERGYKNGTASFGSP----LAGRMFVLAGAGGAGRALAFG 386
G KN + G P AG ++ G+GG RA A+
Sbjct: 1399 ----------LGIKNSLIANGVPEHVNTAG---LIVGSGGTARAAAYA 1433
>gi|154276498|ref|XP_001539094.1| 3-dehydroquinate synthase [Ajellomyces capsulatus NAm1]
gi|327507648|sp|A6R8Q8.1|ARO1_AJECN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|150414167|gb|EDN09532.1| 3-dehydroquinate synthase [Ajellomyces capsulatus NAm1]
Length = 1538
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 170/384 (44%), Gaps = 44/384 (11%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 992 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRTSVPLVFTIRTKGQGGRFPDDAY 1051
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1052 DAALQLYRLAVRMGSEFVDLEISFPEQLL--RTVTEMKGFSTIIASHHDPKGQLSWVNGS 1109
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV I + + + + + +PIIA ++G++G +S++L
Sbjct: 1110 WIQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNIPIIAINMGDKGQLSRML 1169
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYK----VEHINADTKVFGLISKPVGHSKGP 254
NG + S P P S R+ K + I A K F +I PV S+ P
Sbjct: 1170 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKA--KKFAVIGNPVSASRSP 1223
Query: 255 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
+HN FR + Y + D+ + SP F G SV P K ++M DE+ P A
Sbjct: 1224 AMHNTLFRQMGLPHTYGTLETDNPEVAKEFIRSPGFGGASVTIPLKLSIMPLLDEIAPEA 1283
Query: 315 QAIAAVNTIIRRP-------SDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
+I AVNTI+ P +LIG+NTD + + + DA TAS G
Sbjct: 1284 MSIGAVNTIVCAPPAPDSKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAG---- 1339
Query: 368 GRMFVLAGAGGAGRALAFGAKSRG 391
++ G GG RA F ++ G
Sbjct: 1340 ----LVIGGGGTARAAIFALQNMG 1359
>gi|374109982|gb|AEY98887.1| FAGR066Wp [Ashbya gossypii FDAG1]
Length = 1577
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 179/408 (43%), Gaps = 68/408 (16%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAE--GADVVEIRLDCINNFQPG---KDLEII-LT 61
K +T +C + + +L M + K G + VE+R+D + N+ K L + L
Sbjct: 1065 KRSTFVCL-----TFQNLLPEMERIKEAVYGCEAVEVRVDHLENYSQDFVLKQLTALRLA 1119
Query: 62 KKPLPVLIVYRPKWAGGLYEGDEHKRLE-ALHLAEDLGADYVDFELKVAS----NILGKQ 116
LP++ R K GG + +++ LE L + G +++D EL + S IL K+
Sbjct: 1120 TDSLPIVFTIRTKKQGGKFLDNDYSTLEDLLTVGLKAGVEFLDLELTLPSPIHQRILNKR 1179
Query: 117 YSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL 176
Y + G+ S E P E + ++ A D IK V + + + +
Sbjct: 1180 YKTRIIGSHHDFSGEFSWEHPEWE---HRYAQALAMQVDAIKFVATAKGFGDNLSLEEFR 1236
Query: 177 S-HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235
S H P+IA ++ E G +S++L N L + P P +LRQ + +
Sbjct: 1237 SKHTDKPLIAINMRECGKLSRVL----NTILTPITSDVLPQAAAPGQLTLRQ---INELY 1289
Query: 236 ADT-----KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--------LKKFF 282
A K ++ P+GHS+ PILHN YN + +P D +KK
Sbjct: 1290 ASIGGLRPKKMFVVGSPIGHSRSPILHN-----TGYNSLGLPYTFDKFETDSAEIVKK-- 1342
Query: 283 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 342
S S D G +V P K+ +M++ DE+ A+ I AVNTII + DG+ IG+NTD
Sbjct: 1343 SLLSREDLGGIAVTIPLKQDIMQYLDELTDSAKCIGAVNTIIPK-KDGRFIGHNTDW--- 1398
Query: 343 ITAIEDAIKERGYKNGTASFGSP----LAGRMFVLAGAGGAGRALAFG 386
G KN + G P AG ++ G+GG RA A+
Sbjct: 1399 ----------LGIKNSLIANGVPEHVNTAG---LIVGSGGTARAAAYA 1433
>gi|453086579|gb|EMF14621.1| Pentafunctional AroM protein [Mycosphaerella populorum SO2202]
Length = 1559
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 180/405 (44%), Gaps = 48/405 (11%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCI---------NNFQPG---KDLEIILTKKP 64
L + +++Q++ + + G+D +E+R+D + +++PG + + ++
Sbjct: 1034 LTSPTIQQIVPILPEVTM-GSDAIELRVDLLVDPDKEPGETHWRPGFLSEQVALLRASTT 1092
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL--GADYVDFELKVASNILGKQYS-SHQ 121
LP++ R GG + + ++ AL+ AE L G D+VD EL A + K+Y SH+
Sbjct: 1093 LPLIFTLRSVSQGGQFPDEATEQAIALY-AEGLRMGFDFVDLELTAAPEL--KEYVLSHR 1149
Query: 122 SGTRFIVSCN-----LDCETPSEEDLGYLVSRMQATGADIIKLV-----FSVNDITEIAR 171
I S + L +EE + + Q DI+KL+ ND + +
Sbjct: 1150 KMCTIISSHHDPKGQLSWADGAEEWRAHFDAARQY--GDIVKLIGVAKDSDANDDLKAFK 1207
Query: 172 IFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKV 231
+P+IA ++GE G +S++ NG + S PV P S + KV
Sbjct: 1208 KTVAKEFPHLPVIAMNMGELGKMSRVT----NGFMTPVSHPALPVKAAPGQVSAAEIRKV 1263
Query: 232 EHINAD--TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD 289
I + K F L KPV S+ P LHN F IY D SP+
Sbjct: 1264 LGIVGEIPAKKFYLFGKPVQQSRSPALHNTLFNLTGLPHIYGTHETDQASSAADIIRSPE 1323
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII-RRPSDGK--LIGYNTDCEASITAI 346
F G SV P K +M D + P AQ I AVNTI+ + S GK L+G+NTD + + A+
Sbjct: 1324 FGGASVTIPLKLDIMPLLDAIDPAAQTIGAVNTIVPTKSSSGKNMLVGHNTDWQGMVLAL 1383
Query: 347 EDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+A G S + ++ ++ G GG RA + K+ G
Sbjct: 1384 RNA--------GAQSTPAAVSREAGMVVGGGGTARAAIYALKNMG 1420
>gi|255941492|ref|XP_002561515.1| Pc16g12160 [Penicillium chrysogenum Wisconsin 54-1255]
gi|327507668|sp|B6HAA7.1|ARO1_PENCW RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|211586138|emb|CAP93886.1| Pc16g12160 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1586
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 171/383 (44%), Gaps = 49/383 (12%)
Query: 36 GADVVEIRLDCINNFQPGKD------------LEIILTKKPLPVLIVYRPKWAGGLYEGD 83
G+D VE+R+D + + P D + ++ + LPV+ R K GG + D
Sbjct: 1075 GSDAVELRVDLLKD--PAVDGDIPSIDYVNEQMSLLRRRTTLPVIFTIRTKSQGGRFPDD 1132
Query: 84 EHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
H ++ LA G ++VD E+ +L + + + ++ I S + T S ++
Sbjct: 1133 AHDAAMQLYRLAFRCGCEFVDLEIAFPDAML-RAVTEMKGYSKIIASHHDPKGTLSWANM 1191
Query: 143 GYLVSRMQATG-ADIIKLVFSVN--DITEIARIFQLLSH--CQVPIIAYSVGERGLVSQL 197
++ S +A D+IKLV N D R F+ + VP+IA ++G+ G +S++
Sbjct: 1192 SWIPSYNRALEYGDVIKLVGVANTLDDNNALRKFKTWAEEAHDVPLIAINMGDSGQLSRI 1251
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKPVGHSKGPI 255
L NG + S P P S + + + + K F + PV S+ P
Sbjct: 1252 L----NGFMTPVSHPSLPFKAAPGQLSAAEIRRGLSLMGEIKAQKFAIFGSPVSGSRSPA 1307
Query: 256 LHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312
LHN F + Y + V+D+K F +PDF G SV P K +M DEV
Sbjct: 1308 LHNTLFAKMGLPHDYSRLETTKVEDVKDFIR---APDFGGASVTIPLKLDIMPLLDEVAQ 1364
Query: 313 LAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
A+ I AVNTI+R S+G +LIGYNTD + I + +A G T S +
Sbjct: 1365 EAEIIGAVNTIVRV-SNGNNPPRLIGYNTDWQGMIRCMRNA----GVYGSTGSQSA---- 1415
Query: 369 RMFVLAGAGGAGRALAFGAKSRG 391
V+ G GG RA F + G
Sbjct: 1416 ---VVIGGGGTARAAIFALHNMG 1435
>gi|282891758|ref|ZP_06300239.1| hypothetical protein pah_c197o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498342|gb|EFB40680.1| hypothetical protein pah_c197o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 674
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 146/317 (46%), Gaps = 14/317 (4%)
Query: 37 ADVVEIRLDCINNFQPGKDLEI--ILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLA 94
AD+VE+RLD N LE+ I + +P++ R + GG + E R+E ++
Sbjct: 25 ADLVELRLDLFVNVDETSLLELKSIFS---IPMIFTLRSQAQGGNFNQSEESRVEHIYRL 81
Query: 95 EDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA 154
L Y+D E + +++ + SS + I+S + ETP E+ +L + MQ A
Sbjct: 82 AALKPFYLDLESHMPEDVV-RDISSLHPEIQLILSYHNLQETP--ENFDHLYTDMQKIPA 138
Query: 155 DIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT 214
K+ + + R+ + +I S+G G + ++L P N + SL
Sbjct: 139 HFYKIAVTAKSSVDTMRLLVWSKNQNAKLIPISMGPNGQIGRILGPIVNHPFTFASLDED 198
Query: 215 PV--LGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV- 271
P LG + + L + Y+ + + T ++GLI PV S HN + +YV
Sbjct: 199 PKNPLGQLSAKLLIEQYRYRTLTSQTAIYGLIGDPVNLSISDETHNAVLAACGMDAVYVK 258
Query: 272 -PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG 330
P+ +L F + G SV P K+++M F D + A+ I AVNT+ + +
Sbjct: 259 IPVKSTELSPFLELAKALPIRGLSVTMPLKKSIMSFIDHLDVKAEKIGAVNTL--QFKED 316
Query: 331 KLIGYNTDCEASITAIE 347
++ G+NTD ++ A+E
Sbjct: 317 QIYGFNTDGMGAMEALE 333
>gi|326479819|gb|EGE03829.1| pentafunctional AROM polypeptide [Trichophyton equinum CBS 127.97]
Length = 1570
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 168/388 (43%), Gaps = 42/388 (10%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPKWAG 77
N+ QA + G+ VE+R+D + + + + + ++ LP++ R K G
Sbjct: 1066 NILQAVSFGSHAVELRVDLLKDPSSTSAIPSISYVAEQISFLRSQVSLPLIFTIRTKAQG 1125
Query: 78 GLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
GL+ + L+ LA +G+++VD E+ N+L + G I++ + D
Sbjct: 1126 GLFPDNAVDEALGLYKLAIRMGSEFVDLEISFPDNLL--HAVTEIKGFSKIIASHHDVNG 1183
Query: 137 PSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGE 190
G + D+IKL+ + + + Q + + +PIIA ++G
Sbjct: 1184 QLSWANGSWIQYYNKALQYGDVIKLIGVAKSLGDNMALQQFKAWAEKSYPIPIIAINMGN 1243
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKP 247
+G +S++L NG + S P P + + +RQ + D K F L KP
Sbjct: 1244 KGRLSRIL----NGFMTPVSHPALPFKAAPGQLSAKEIRQALTLIG-ELDAKEFALFGKP 1298
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
+ S+ P LHN F + Y + D+++ S +F G SV P KE +M+
Sbjct: 1299 ISASRSPALHNTLFAEAGFPHEYGRLETDNVEDVKEFIYSEEFGGASVTIPLKERIMELL 1358
Query: 308 DEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
DE+ P A+ I AVNTI+ +G KL+GYNTD + ++DA G
Sbjct: 1359 DEISPEAKIIGAVNTIVPIIEEGKATRKLVGYNTDWQGMARCLKDA--------GAIYLK 1410
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRG 391
G + G+GG RA + S G
Sbjct: 1411 K---GESALTIGSGGTARAAIYSLHSMG 1435
>gi|429853054|gb|ELA28153.1| pentafunctional arom polypeptide [Colletotrichum gloeosporioides Nara
gc5]
Length = 1556
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 163/371 (43%), Gaps = 28/371 (7%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEAL 91
G+D VE+R D + ++ P + + ++ + +P++ R GG + + + LE
Sbjct: 1055 GSDAVELRADLLQDYSPEFVARQVALLRSVADVPIIFTLRTMAQGGKFPDEAFDQGLELY 1114
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
A +G +++D E+ + ++ + + +R I S + T S ++ + +A
Sbjct: 1115 QKASRMGVEFIDVEMTLPEKVI-QAVVERKGRSRIIASHHDPHGTLSWKNGSWTPFYNKA 1173
Query: 152 -TGADIIKLV---FSVNDITEIARI-FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGAL 206
D+IKLV S+ D ++AR ++L+ + PIIA ++G G +S++L NG L
Sbjct: 1174 LQWGDVIKLVGTAQSLEDNYDLARFKSEMLASHRTPIIALNMGSAGKLSRVL----NGCL 1229
Query: 207 VYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPILHNPTFRHV 264
S P P S + K + D K F L KP+ S+ P LHN F V
Sbjct: 1230 TPVSHPDLPFKAAPGQLSAAEIRKALSLLGGIDPKSFYLFGKPISASRSPALHNSLFDLV 1289
Query: 265 NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII 324
Y D +PDF G SV P K +M DEV A+ I AVNTII
Sbjct: 1290 GLPHKYWRKETDVAADLRDIIRAPDFGGASVTIPLKLDIMNEIDEVSEAARVIGAVNTII 1349
Query: 325 RRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAG 380
G KL+G NTD + A++ GT + S ++ G+GG
Sbjct: 1350 PVSGSGQDGAKLVGDNTDWLGMVYALQ--------SEGTTARSSSGVQHAAMVIGSGGTT 1401
Query: 381 RALAFGAKSRG 391
RA F S G
Sbjct: 1402 RAAIFALHSLG 1412
>gi|423417741|ref|ZP_17394830.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-1]
gi|401106912|gb|EJQ14869.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-1]
Length = 277
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ KE
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAI 147
>gi|229019559|ref|ZP_04176375.1| Shikimate dehydrogenase [Bacillus cereus AH1273]
gi|229025800|ref|ZP_04182199.1| Shikimate dehydrogenase [Bacillus cereus AH1272]
gi|228735508|gb|EEL86104.1| Shikimate dehydrogenase [Bacillus cereus AH1272]
gi|228741725|gb|EEL91909.1| Shikimate dehydrogenase [Bacillus cereus AH1273]
Length = 277
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ KE
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAI 147
>gi|423389348|ref|ZP_17366574.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-3]
gi|401641439|gb|EJS59156.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-3]
Length = 277
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ KE
Sbjct: 63 TPHKVAIMEYLDEVAPLAKQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAI 147
>gi|190347323|gb|EDK39572.2| hypothetical protein PGUG_03670 [Meyerozyma guilliermondii ATCC 6260]
Length = 1210
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 176/384 (45%), Gaps = 33/384 (8%)
Query: 26 LSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEG 82
+S+ +A G D VE+R+D + ++ + II +P++ R GG
Sbjct: 710 VSDKLEAVTAGCDAVELRVDLLEDYSSTFVAEQTAIIRKYLNIPIIFTVRTVSQGGKIPD 769
Query: 83 DEHKRLEALHL-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEED 141
++ + +E L L A LG Y+D +L S + K S++ T+ I S + S ++
Sbjct: 770 EDLETIERLSLLAIKLGVVYLDLQLTYPSKTIDKILSAN-VFTKIIASFHDPKREFSWKE 828
Query: 142 LGYLVSRMQAT--GADIIKLV---FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQ 196
+ QA GADI+KLV SV D ++ QL H P+IA ++GE+G +S+
Sbjct: 829 PEWDNRFQQAINIGADIVKLVGSAQSVQDNIDLESFRQL--HTSRPLIAINMGEQGKLSR 886
Query: 197 LLSPKFNGALVYGSLKGTPVLGLPTVESLRQ-TYKVEHINADTKVFGLISKPVGHSKGPI 255
+L+P + +L G TV + ++ ++A K F +I KP+ HS+ P
Sbjct: 887 VLNPVLT-PVTSDTLTEKAAPGQLTVSEINGIANQIGLLSA--KSFWVIGKPIQHSRSPP 943
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFST-YSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
LHN ++ + + DD KK F DF G ++ P K +MK+ DE+ A
Sbjct: 944 LHNAGYKCLGLPHKFDRFESDDAKKVFEKLMKKSDFGGLAITMPLKLDIMKYVDELSEAA 1003
Query: 315 QAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS-PLAGRMF 371
+ I AVNT+ +++ + +G NTD G N A FG+ + +
Sbjct: 1004 KTIGAVNTVCSVKKDNHQIFVGDNTDW-------------VGISNSFAKFGAYGSSTQCG 1050
Query: 372 VLAGAGGAGRALAFGAKSRGARVV 395
++ G GG RA F G + +
Sbjct: 1051 LVVGGGGTSRAAVFALHQMGCKKI 1074
>gi|146416639|ref|XP_001484289.1| hypothetical protein PGUG_03670 [Meyerozyma guilliermondii ATCC 6260]
Length = 1210
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 176/384 (45%), Gaps = 33/384 (8%)
Query: 26 LSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEG 82
+S+ +A G D VE+R+D + ++ + II +P++ R GG
Sbjct: 710 VSDKLEAVTAGCDAVELRVDLLEDYSSTFVAEQTAIIRKYLNIPIIFTVRTVSQGGKIPD 769
Query: 83 DEHKRLEALHL-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEED 141
++ + +E L L A LG Y+D +L S + K S++ T+ I S + S ++
Sbjct: 770 EDLETIERLSLLAIKLGVVYLDLQLTYPSKTIDKILSANVF-TKIIASFHDPKREFSWKE 828
Query: 142 LGYLVSRMQAT--GADIIKLVFS---VNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQ 196
+ QA GADI+KLV S V D ++ QL H P+IA ++GE+G +S+
Sbjct: 829 PEWDNRFQQAINIGADIVKLVGSAQLVQDNIDLESFRQL--HTSRPLIAINMGEQGKLSR 886
Query: 197 LLSPKFNGALVYGSLKGTPVLGLPTVESLRQ-TYKVEHINADTKVFGLISKPVGHSKGPI 255
+L+P + +L G TV + ++ ++A K F +I KP+ HS+ P
Sbjct: 887 VLNPVLT-PVTSDTLTEKAAPGQLTVSEINGIANQIGLLSA--KSFWVIGKPIQHSRSPP 943
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFST-YSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
LHN ++ + + DD KK F DF G ++ P K +MK+ DE+ A
Sbjct: 944 LHNAGYKCLGLPHKFDRFESDDAKKVFEKLMKKSDFGGLAITMPLKLDIMKYVDELSEAA 1003
Query: 315 QAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS-PLAGRMF 371
+ I AVNT+ +++ + +G NTD G N A FG+ + +
Sbjct: 1004 KTIGAVNTVCLVKKDNHQIFVGDNTDW-------------VGISNSFAKFGAYGSSTQCG 1050
Query: 372 VLAGAGGAGRALAFGAKSRGARVV 395
++ G GG RA F G + +
Sbjct: 1051 LVVGGGGTSRAAVFALHQMGCKKI 1074
>gi|339500912|ref|YP_004698947.1| 3-dehydroquinate dehydratase [Spirochaeta caldaria DSM 7334]
gi|338835261|gb|AEJ20439.1| 3-dehydroquinate dehydratase [Spirochaeta caldaria DSM 7334]
Length = 498
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 185/401 (46%), Gaps = 60/401 (14%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LPVL 68
+C L +++ + L + + +A DVVE+R+D ++ D + + P +P +
Sbjct: 4 VCLCLTGKTIVKDLELVDRYRAY-IDVVELRVDFLD-----PDERFYIRRFPALAGIPTI 57
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLG-AD--------YVDFELKVASNILGKQYSS 119
+ R K GG ++ E R+ + LA L AD YVD E + ++ + ++
Sbjct: 58 LTVRRKIDGGNFKEGEGARI--VLLAAGLAFADTDQRRNFAYVDLEEDL--DVPSLEEAA 113
Query: 120 HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC 179
GT+ I S + +E+L + ++ TG +I K+ ++ ++AR+F++
Sbjct: 114 RTFGTKIIRSYH--NFHGVDENLEQKLRSLRRTGDEIAKVAVMPHNYDDVARLFKVADST 171
Query: 180 Q-VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPT-------------VESL 225
+ + I ++G G+ +++L+ + L + S P+ + + +L
Sbjct: 172 KDMEKILIAMGPHGVSTRILAERLGSHLSFTS----PIAEIESDSEIQVAGPGQLDPRTL 227
Query: 226 RQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY 285
TY+ +N TKV+G+I P+ + P +HN + + N +Y+P V DL FF+
Sbjct: 228 VDTYRFRSLNHKTKVYGIIGYPLSATASPQIHNEGYSRLKMNAVYIPFPVQDLSSFFNLA 287
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
+ + G SV P+KEAV+ +C + P I + NT++R P YNTD +
Sbjct: 288 ETLNIQGLSVTIPHKEAVLTYCSQRSPEVDRIGSCNTLVRAPQG--WAAYNTDAQ----- 340
Query: 346 IEDAIKERGYKNGTASF-GSP-LAGRMFVLAGAGGAGRALA 384
G+ + F G P L + + GAGG +A+A
Sbjct: 341 --------GFSDSLLEFIGKPNLLFKRVTIIGAGGVAKAVA 373
>gi|320585990|gb|EFW98669.1| dehydroquinase class 1 [Grosmannia clavigera kw1407]
Length = 1584
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 168/376 (44%), Gaps = 35/376 (9%)
Query: 36 GADVVEIRLDCINNFQPGK-DLEIILTK---KPLPVLIVYRPKWAGGLY-EGDEHKRLEA 90
GAD VE+R+D + +F ++ L + K LP++ R GG + + D + L
Sbjct: 1080 GADAVELRVDLLESFAVDSVSTQVALLRSVAKKLPIIFTVRTVSQGGRFPDADTDQALAL 1139
Query: 91 LHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQ 150
+A +G +YVD E+ + +++ + + + TR I S + T S + G++ +
Sbjct: 1140 YRIAIRMGIEYVDLEMTMPDHVI-EAVTKSKGKTRIIASHHDPKGTLSWRNGGWMPHFNK 1198
Query: 151 A-TGADIIKLV---FSVNDITEIA--RIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
A DIIKL+ S+ D +A + L +H + P+IA ++G +G +S++L NG
Sbjct: 1199 ALQHGDIIKLIGVARSMEDNFAVAAFKTRMLATHAK-PMIALNMGSQGKLSRVL----NG 1253
Query: 205 ALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPILHNPTFR 262
L S P P S R+ + + D + F L P+ S+ P LH F
Sbjct: 1254 FLTPVSHPDLPFAAAPGQLSAREIRQALSLIGDLEQRRFVLFGMPIAKSRSPALHQALFD 1313
Query: 263 HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
Y + SPDF G SV P K VM DEV A+AI AVNT
Sbjct: 1314 LTGLPHTYGLAETSSVADVLPIVRSPDFGGASVTIPLKLDVMDVVDEVTEAARAIGAVNT 1373
Query: 323 IIR-------RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
II + +LIG NTD I A+ A ER + +A AG ++ G
Sbjct: 1374 IIPVAASKGGKAGGARLIGDNTDWRGMIHALRGAGVERPSTSQSA------AG---LVVG 1424
Query: 376 AGGAGRALAFGAKSRG 391
+GG RA + + G
Sbjct: 1425 SGGTTRAAVYALHALG 1440
>gi|94263740|ref|ZP_01287547.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
gi|93455840|gb|EAT06003.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
Length = 273
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 16/163 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T+V+G+I PV HS P++HN F N Y+P D + + + AG
Sbjct: 4 IDGQTEVYGIIGNPVRHSLSPLIHNAAFAACGLNKAYLPFPALDAAAAVAALRALEIAGV 63
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+K+AVM D++ P+A AI AVNTI+R+ DG+L GYNTD + A+E +
Sbjct: 64 SVTIPHKQAVMAALDDIDPVAAAIGAVNTIVRQ--DGRLHGYNTDWLGANRALEAELA-- 119
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
LAG ++ GAGG+ RA+ FG K GAR+ +
Sbjct: 120 ------------LAGASILVLGAGGSARAIGFGLKEAGARLTL 150
>gi|94266091|ref|ZP_01289808.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
gi|93453336|gb|EAT03770.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
Length = 273
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 16/163 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T+V+G+I PV HS P++HN F N Y+P D + + + AG
Sbjct: 4 IDGQTEVYGIIGNPVRHSLSPLIHNAAFAACGLNKAYLPFPALDAAAAVAALRALEIAGV 63
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+K+AVM D++ P+A AI AVNTI+R+ DG+L GYNTD + A+E +
Sbjct: 64 SVTIPHKQAVMAALDDIDPVAAAIGAVNTIVRQ--DGRLHGYNTDWLGANRALEAELA-- 119
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
LAG ++ GAGG+ RA+ FG K GAR+ +
Sbjct: 120 ------------LAGASILVLGAGGSARAIGFGLKEAGARLTL 150
>gi|19115593|ref|NP_594681.1| pentafunctional aromatic polypeptide Aro1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|15213935|sp|Q9P7R0.1|ARO1_SCHPO RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|7019762|emb|CAB75770.1| pentafunctional aromatic polypeptide Aro1 (predicted)
[Schizosaccharomyces pombe]
Length = 1573
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 174/383 (45%), Gaps = 34/383 (8%)
Query: 36 GADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G D +E+R+D + + + + + ++ LP++ R GGL+ D+
Sbjct: 1077 GCDAIEVRVDYLKDPKSSNGISSLDFVAEQISLLRCSTTLPIIFTIRTISQGGLFPNDKE 1136
Query: 86 KRLEALHL-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+ + L L A G D+VD EL +S + Y H+ T+ I+S + T S
Sbjct: 1137 EEAKELMLSAMRYGCDFVDVELGWSSETINILYQ-HKGYTKLIMSWHDLSGTWSWARPHE 1195
Query: 145 LVSRMQ--ATGADIIKLVFSVNDITEIARI----FQLLSHCQVPIIAYSVGERGLVSQLL 198
+ +++ ++ AD+IKLV N++ + + ++ + +P+I +++G G +S++L
Sbjct: 1196 WMQKVELASSYADVIKLVGMANNLNDNLELEEFRTRITNSMDIPLILFNMGRFGQLSRIL 1255
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHN 258
+ KF + + L G TV+ L + +V + F L KP+ HS+ PILH+
Sbjct: 1256 N-KFMTPVTHPLLPSKAAPGQLTVKQLNEA-RVLIGEILPEKFFLFGKPIKHSRSPILHS 1313
Query: 259 PTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIA 318
+ + Y D + + + PDF G +V PYK +VMKF DE+ A+
Sbjct: 1314 TAYELLGLPHTYEAFETDTVDEVQKVLNLPDFGGANVTIPYKLSVMKFMDELSDEARFFG 1373
Query: 319 AVNTIIRRPSDGKLI--GYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGA 376
AVNTII KL+ G NTD +A+ G L ++ GA
Sbjct: 1374 AVNTIIPIRIGDKLVLRGDNTDWRGIYDTFANALD-----------GVSLRDTNGLVIGA 1422
Query: 377 GGAGRALAFGAKSRG-ARVVIFD 398
GG RA + G +R+ + +
Sbjct: 1423 GGTSRAAIYSLHRLGVSRIYLLN 1445
>gi|336366066|gb|EGN94414.1| hypothetical protein SERLA73DRAFT_114628 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378738|gb|EGO19895.1| hypothetical protein SERLADRAFT_363753 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1617
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 173/388 (44%), Gaps = 48/388 (12%)
Query: 36 GADVVEIRLDCINN------FQP--------GKDLEIILTKKPLPVLIVYRPKWAGGLY- 80
G D +E+R+D + + F P + L + LP++ R GG +
Sbjct: 1106 GVDALEVRVDLLRSPKDFDAFGPYIPPVAYVTEQLAALRRTTSLPIVFTVRTVSQGGSFP 1165
Query: 81 EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEE 140
+ E + L+LA +GA+Y+D E+ ++ K SH+ ++ I S + D
Sbjct: 1166 DKAEKEAFHLLNLAVRIGAEYIDAEISWPEKLI-KDLVSHKGSSQIIASWH-DWTGKMRW 1223
Query: 141 DLGYLVSR--MQATGADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVGERGL 193
+ + ++ + A DI+K+V N + + ++ +S PIIA ++G G
Sbjct: 1224 NEASVKAKYDIAARFGDIVKIVGKANSVQDNFALYDFVSRVSSASNAKPIIAINMGVEGQ 1283
Query: 194 VSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHS 251
+S++L+ F+ S P P S Q + H+ + + + P+ HS
Sbjct: 1284 MSRILNSTFSPV----SHPLLPTKAAPGQLSYAQIQQALHLLGQLPAQRYFIFGNPIAHS 1339
Query: 252 KGPILHNPTFRHVNYNGIYVPMFVDDLKK-FFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310
P LHN F + Y + D+ + + +SPDF G SV P+K V+ D++
Sbjct: 1340 MSPTLHNTGFEVLGLPHTYQLLETTDVGEGIKAALASPDFGGASVTIPFKLDVIPLLDQL 1399
Query: 311 HPLAQAIAAVNTIIRRPSDGK-----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
P A+AI AVNTI+ R +D L G NTD I ++++ R + G+P
Sbjct: 1400 SPAAEAIGAVNTIVPRLADASGTNRILYGDNTDW----LGIVESVRSRA-----PALGAP 1450
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGAR 393
A ++ GAGG RA F K+ GA+
Sbjct: 1451 QAA---LVIGAGGTARAAIFALKALGAQ 1475
>gi|46446516|ref|YP_007881.1| 3-phosphoshikimate
1-carboxyvinyltransferase(5-enolpyruvylshikimate-3-
phosphat e synthase, EPSP synthase) [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400157|emb|CAF23606.1| putative 3-phosphoshikimate
1-carboxyvinyltransferase(5-enolpyruvylshikimate-3-
phosphate synthase, EPSP synthase) [Candidatus
Protochlamydia amoebophila UWE25]
Length = 939
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 178/404 (44%), Gaps = 45/404 (11%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVL 68
++ +C L+ + + + + Q ++ D++EIRLD + +L+ + P++
Sbjct: 16 HSCQLCVSLIDLTCDAFIYQIQQLPSQ-VDLIEIRLDKLLKIDFA-ELDRLKEIAHRPLI 73
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIV 128
R K GG + G+ K+ D+VD E + L ++ T++I+
Sbjct: 74 WTLRKKSQGGNFLGNIQKQFLIFKELAKRQPDFVDIEADIPLEWL-QELQKISPQTQWII 132
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKL---VFSVNDITEIARIFQLLSHCQVPIIA 185
S + ETP L + ++ A + KL S+ D ++ + Q + +
Sbjct: 133 SWHEVKETPH---LKTCLDQLYALPGNYYKLACYTHSIIDSLKLLEMAQQENKHSRRLCT 189
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGL 243
+G +G +++L+P + SLK G + ++L QTY+ + ++ T++FGL
Sbjct: 190 IGLGMKGQCTRILAPVTGQPFTFASLKEGLESAPGQISFQTLFQTYRFKKLSQQTEIFGL 249
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKE 301
I P+ S + HN H+N N +Y+ V+ +L+ FF GFSV P+KE
Sbjct: 250 IGHPIDKSLSHLTHNAVLDHLNQNAVYIKFDVEETELELFFQHIQRFSVRGFSVTMPHKE 309
Query: 302 AVMKFC-----DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA--IEDAIKERG 354
V K DE H A NT++ S + G NTD ++ A +ED
Sbjct: 310 RVKKILALNMDDESH------LACNTLLF--SSSIINGTNTDGIGALKALKVED------ 355
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
L + +L GAGG +A+A+ AK RGA V I +
Sbjct: 356 -----------LKDKKLILLGAGGTSQAIAYEAKKRGAEVTILN 388
>gi|326471134|gb|EGD95143.1| hypothetical protein TESG_02636 [Trichophyton tonsurans CBS 112818]
Length = 1570
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 169/388 (43%), Gaps = 42/388 (10%)
Query: 28 NMYQAKAEGADVVEIRLDCI-----NNFQP-----GKDLEIILTKKPLPVLIVYRPKWAG 77
N+ QA + G+ VE+R+D + N+ P + + + ++ LP++ R K G
Sbjct: 1066 NILQAVSFGSHAVELRVDLLKDPSSNSAIPSISYVAEQISFLRSQVSLPLIFTIRTKAQG 1125
Query: 78 GLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
GL+ + L+ LA +G+++VD E+ N+L + G I++ + D
Sbjct: 1126 GLFPDNAVDEALGLYKLAIRMGSEFVDLEISFPDNLL--HAVTEIKGFSKIIASHHDVNG 1183
Query: 137 PSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGE 190
G + D+IK + + + + Q + + +PI+A ++G
Sbjct: 1184 QLSWANGSWIQYYNKALQYGDVIKFIGVAKSLGDNMALQQFKAWAEKSYPIPIVAINMGN 1243
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKP 247
+G +S++L NG + S P P + + +RQ + D K F L KP
Sbjct: 1244 KGCLSRIL----NGFMTPVSHPALPFKAAPGQLSAKEIRQALTLIG-ELDAKEFALFGKP 1298
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
+ S+ P LHN F + Y + D+++ S +F G SV P KE +M+
Sbjct: 1299 ISASRSPALHNTLFAEAGFPHEYGRLETDNVEDVKEFIYSEEFGGASVTIPLKERIMELL 1358
Query: 308 DEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
DE+ P A+ I AVNTI+ +G KL+GYNTD + ++DA G
Sbjct: 1359 DEISPEAKIIGAVNTIVPIIEEGKATRKLVGYNTDWQGMARCLKDA--------GAIYLK 1410
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRG 391
G + G+GG RA + S G
Sbjct: 1411 K---GESALTIGSGGTARAAIYSLHSMG 1435
>gi|402074932|gb|EJT70403.1| pentafunctional AROM polypeptide [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1575
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 166/372 (44%), Gaps = 33/372 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
G+D VE+R+D + + P K + ++ LP++ R GG Y D ++ L+
Sbjct: 1081 GSDAVELRVDLLEDHSPEFVTKQVALLRYVCNLPIVFTVRTASQGGRYPDDNYEGALTLY 1140
Query: 93 L-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE-TPSEEDLGYLVSRMQ 150
L A LG +YVD E+ + +++ K ++ G I++ + D + T S + ++ +
Sbjct: 1141 LLAIRLGVEYVDVEMTMPDDVIEK--TTQAKGKTSIIASHHDPKGTLSWRNGSWIPFYNK 1198
Query: 151 A-TGADIIKLV-FSVNDITEIA----RIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
A D++KLV +S D A + +H P+IA ++GE G +S++L+ F
Sbjct: 1199 ALRHGDVVKLVGWSRGDDDNFALAGFKARMSSAHKNTPLIALNMGEAGKLSRVLN-GFLA 1257
Query: 205 ALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPILHNPTFR 262
+ + L G + +R+ H+ + F L KP+ S+ P LHN F
Sbjct: 1258 PVTHSCLTAAAAPGQLSAAEIRRGL---HLLGKLPRRRFHLFGKPISKSRSPALHNTLFE 1314
Query: 263 HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
IY D + +PDF G SV P K V+ DEV A+ I AVNT
Sbjct: 1315 QNGLPHIYSNFETDVASEMQELIRAPDFGGASVTIPLKLGVIPLLDEVSDSAKTIGAVNT 1374
Query: 323 II-RRPSDG--KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGA 379
II + DG +L+G NTD + + R P + R V+ GAGG
Sbjct: 1375 IIPTQQPDGSVRLVGENTDWRGMALCLRSSGVVR-----------PPSPRPAVVLGAGGT 1423
Query: 380 GRALAFGAKSRG 391
RA F S G
Sbjct: 1424 ARAAIFALHSLG 1435
>gi|389640335|ref|XP_003717800.1| pentafunctional AROM polypeptide [Magnaporthe oryzae 70-15]
gi|374095368|sp|A4RD09.2|ARO1_MAGO7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|351640353|gb|EHA48216.1| pentafunctional AROM polypeptide [Magnaporthe oryzae 70-15]
gi|440466367|gb|ELQ35639.1| pentafunctional AROM polypeptide [Magnaporthe oryzae Y34]
gi|440487854|gb|ELQ67619.1| pentafunctional AROM polypeptide [Magnaporthe oryzae P131]
Length = 1590
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 170/370 (45%), Gaps = 28/370 (7%)
Query: 36 GADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
G+D VE+R+D + + P + + ++ + +P++ R GG + +H AL+
Sbjct: 1089 GSDAVELRVDLLQDHSPEFVVRQVALLRSLCKMPIIFTVRTVSQGGRFPDADHAGALALY 1148
Query: 93 -LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE-TPSEEDLGYLVSRMQ 150
+A +G +YVD E+ + +++ + + G I++ + D + T S + ++ +
Sbjct: 1149 RVALRMGVEYVDVEMTMPEDVI--ETVTKAKGYTSIIASHHDPKGTLSWRNGAWMQYYNK 1206
Query: 151 ATG-ADIIKLV-FSVNDITEIA----RIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
A D+IKLV + D + + L +H PIIA ++GE+G +S++L+ F
Sbjct: 1207 ALHYGDVIKLVGWCRTDEDNFSLLTFKTRMLAAHESTPIIALNMGEQGKLSRVLN-GFMT 1265
Query: 205 ALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHV 264
+ + +L G T +RQ + + F L KP+ S+ PILHN F+
Sbjct: 1266 PVTHAALPAAAAPGQLTAAEIRQALSLLS-KIPKRKFYLFGKPISKSRSPILHNTLFQQT 1324
Query: 265 NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII 324
Y + D + + +T + DF G SV P K +M DE+ A+ I AVNTII
Sbjct: 1325 GLPHTYSRLETDKVAEVETTIRASDFGGASVTIPLKLDIMPMLDEITDAAKTIGAVNTII 1384
Query: 325 RRPSDG---KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGR 381
P +L G NTD + ++ A T P +G V+ G+GG R
Sbjct: 1385 PVPVQAGKQRLRGDNTDWCGMVHSLRMA-------GVTGKRACPASG---VVVGSGGTTR 1434
Query: 382 ALAFGAKSRG 391
A F S G
Sbjct: 1435 AAIFALHSLG 1444
>gi|320352426|ref|YP_004193765.1| shikimate dehydrogenase [Desulfobulbus propionicus DSM 2032]
gi|320120928|gb|ADW16474.1| shikimate dehydrogenase [Desulfobulbus propionicus DSM 2032]
Length = 278
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
IN T++FG+I PV HS P +HN F H+ NG+Y+PM DL F S F G
Sbjct: 2 INGQTQLFGIIGNPVEHSLSPAMHNAAFAHLGLNGVYIPMRPADLGDGFRGLKSLGFVGV 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTII-RRPSDG--KLIGYNTDCEASITAIEDAI 350
SV P+K AVM + DEV P+A+ I AVNT++ RR DG + +GYNTD S A+ +A+
Sbjct: 62 SVTVPFKVAVMDYIDEVDPVARKIGAVNTLLFRRDQDGQNRCLGYNTDWLGSNQALAEAL 121
>gi|51246864|ref|YP_066748.1| shikimate 5-dehydrogenase [Desulfotalea psychrophila LSv54]
gi|50877901|emb|CAG37741.1| probable shikimate 5-dehydrogenase [Desulfotalea psychrophila
LSv54]
Length = 296
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 16/161 (9%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 297
T V+G+I PV HS P++HN F + + +YVP V+D++ + G SV
Sbjct: 19 TAVYGIIGNPVSHSMSPLMHNAAFESLGIDAVYVPFRVEDVESAVQGLRGLNICGVSVTI 78
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK--LIGYNTDCEASITAIEDAIKERGY 355
P+KEAV+ DEV P+A I AVNTI+ DG+ L G+NTD + A++ +
Sbjct: 79 PHKEAVIPLLDEVDPVAGKIGAVNTIVSSMRDGRPFLKGFNTDWIGANRALQAVVS---- 134
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
L G+ +L GAGG+ RA+ FG GA V++
Sbjct: 135 ----------LKGKQVLLLGAGGSARAIGFGLLEAGAEVIL 165
>gi|229163283|ref|ZP_04291237.1| Shikimate dehydrogenase [Bacillus cereus R309803]
gi|228620190|gb|EEK77062.1| Shikimate dehydrogenase [Bacillus cereus R309803]
Length = 277
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLAMQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL G+ +L GAGGA RA+ F G +
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADIGVK 145
>gi|328952377|ref|YP_004369711.1| shikimate dehydrogenase [Desulfobacca acetoxidans DSM 11109]
gi|328452701|gb|AEB08530.1| Shikimate dehydrogenase [Desulfobacca acetoxidans DSM 11109]
Length = 275
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I T +FG++ +PV HS P +HN F + N +YVP V DL + G
Sbjct: 2 ITGATIIFGILGRPVAHSLSPAMHNAAFAALGLNAVYVPFAVQDLVAAVQGLRGLNIGGV 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE ++ DEV AQ I AVNT++ R G L G NTD + ++T +++ I
Sbjct: 62 SVTIPFKEEIIPLLDEVDEEAQTIGAVNTVVNR--QGWLWGCNTDWQGALTPLQEQIA-- 117
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400
L+G+ ++ GAGGAGRA+ + + V + D++
Sbjct: 118 ------------LSGQQIMVLGAGGAGRAIVYAVRRAAGLVTVADLN 152
>gi|163942090|ref|YP_001646974.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis KBAB4]
gi|226697482|sp|A9VHW1.1|AROE_BACWK RecName: Full=Shikimate dehydrogenase
gi|163864287|gb|ABY45346.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis KBAB4]
Length = 277
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y+ V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYLAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEI 147
>gi|390956953|ref|YP_006420710.1| 3-dehydroquinate dehydratase [Terriglobus roseus DSM 18391]
gi|390411871|gb|AFL87375.1| 3-dehydroquinate dehydratase [Terriglobus roseus DSM 18391]
Length = 512
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 155/349 (44%), Gaps = 24/349 (6%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL----EIILTKKPLPVLIVYR 72
++A + E V +N + VE RLD + + P L + + + + + R
Sbjct: 32 MIALAAETVRTNPF---------VEFRLDSLAD--PAAMLPALRQFLFGNRDVTAVATCR 80
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQ-SGTRFIVSCN 131
K GG + GD ++ L A G VD E++ A + + +G I+S +
Sbjct: 81 RKAFGGDFGGDARAQIAILREAALAGCRLVDIEVETAEELGQAALEELRGAGAAVILSWH 140
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSH--CQVPIIAYSVG 189
TP +L ++ RM+ D+ K+V + + + R+ +L + ++A S+G
Sbjct: 141 DFQATP---ELEPVLERMRPFAPDVYKIVPTAKTLRDALRLIDVLEKHGGEGNLVAMSMG 197
Query: 190 ERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
+G ++++L P+F + S G G +V LR+ Y+V+ I++ T ++ + +P
Sbjct: 198 FKGTLTRVLGPRFGSLFTFASADGHGGTAPGQVSVSVLRELYRVDEISSQTAIYAVAGEP 257
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
+ S P + N F + +Y+P+ D K+ + G S+ P KE VM
Sbjct: 258 ITGSMSPRMQNTAFADAGMDAVYLPLETSDPKELLEVAERLNIRGLSITMPLKELVMPLL 317
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+ A NT++R DGKL G+NTD + + I +G +
Sbjct: 318 AFRDRSVEQAGACNTLLRH-RDGKLAGFNTDIAGIVEPLARRITLKGAR 365
>gi|315230187|ref|YP_004070623.1| shikimate 5-dehydrogenase I alpha [Thermococcus barophilus MP]
gi|315183215|gb|ADT83400.1| shikimate 5-dehydrogenase I alpha [Thermococcus barophilus MP]
Length = 272
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
INA T+++GLI KPV HS P++HN F+ N N +Y+ VDDL+ + +G
Sbjct: 2 INAKTRLYGLIGKPVEHSLSPVIHNALFKRYNINAVYLAFDVDDLESAVKGVKALGISGL 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+V PYKE +++F DE+ A+AI +VNT++ R +GKLIGYNTD ++ A++
Sbjct: 62 NVTMPYKEQILEFLDELSEEARAIGSVNTVVNR--EGKLIGYNTDGIGALKALK 113
>gi|228993077|ref|ZP_04153000.1| Shikimate dehydrogenase [Bacillus pseudomycoides DSM 12442]
gi|228999127|ref|ZP_04158709.1| Shikimate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228760744|gb|EEM09708.1| Shikimate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228766725|gb|EEM15365.1| Shikimate dehydrogenase [Bacillus pseudomycoides DSM 12442]
Length = 277
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++MK+ DE+ PLA+ I AVNT++ R DGKLIGYNTD + +++ KE
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 117 --------PLYQKRILLLGAGGACRAIYFSLADAGVKEI 147
>gi|228902860|ref|ZP_04067003.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|434377502|ref|YP_006612146.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-789]
gi|228856784|gb|EEN01301.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|401876059|gb|AFQ28226.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-789]
Length = 277
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N N Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMNAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL G+ +L GAGGA RA+ F G +
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVK 145
>gi|423512448|ref|ZP_17488979.1| shikimate dehydrogenase [Bacillus cereus HuA2-1]
gi|402449419|gb|EJV81256.1| shikimate dehydrogenase [Bacillus cereus HuA2-1]
Length = 277
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL R +L GAGGA RA+ F G + +
Sbjct: 116 -------DPLQERRILLIGAGGASRAIYFSLADVGVKEI 147
>gi|220928114|ref|YP_002505023.1| shikimate 5-dehydrogenase [Clostridium cellulolyticum H10]
gi|219998442|gb|ACL75043.1| shikimate 5-dehydrogenase [Clostridium cellulolyticum H10]
Length = 294
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 16/163 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 288
+E +N T+++G++ PV H+K P +HN F+ N IY+P+ VD L++ + +
Sbjct: 4 IEVVNGKTQLYGVLGNPVQHTKSPFIHNTLFKEFEINAIYLPIHVDKGKLEQVMDGFRAI 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
F+GF+V P+K+ ++ DEV + + A+NT+I + DG+ IGYNTD E +
Sbjct: 64 KFSGFNVTVPFKKDIINHLDEVSAEGKLMGAINTVINK--DGRFIGYNTDAEGFV----- 116
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
R + +G F + G+ +L GAGG RA+A S G
Sbjct: 117 ----RDFSDG---FETTFKGKRVMLLGAGGTSRAIAVRLASEG 152
>gi|75761259|ref|ZP_00741241.1| Shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491241|gb|EAO54475.1| Shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 229
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N N Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMNAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL G+ +L GAGGA RA+ F G +
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVK 145
>gi|229081598|ref|ZP_04214094.1| Shikimate dehydrogenase [Bacillus cereus Rock4-2]
gi|228701704|gb|EEL54194.1| Shikimate dehydrogenase [Bacillus cereus Rock4-2]
Length = 277
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 20/164 (12%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400
PL G+ +L G+GGA RA+ F G + DID
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVK----DID 148
>gi|423612545|ref|ZP_17588406.1| shikimate dehydrogenase [Bacillus cereus VD107]
gi|401246134|gb|EJR52486.1| shikimate dehydrogenase [Bacillus cereus VD107]
Length = 277
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVK 145
>gi|423558082|ref|ZP_17534384.1| shikimate dehydrogenase [Bacillus cereus MC67]
gi|401191350|gb|EJQ98372.1| shikimate dehydrogenase [Bacillus cereus MC67]
Length = 277
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AVM++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAVMEYLDEVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEI 147
>gi|384452778|ref|YP_005665375.1| shikimate 5-dehydrogenase [Chlamydophila psittaci 08DC60]
gi|334695467|gb|AEG88683.1| shikimate 5-dehydrogenase [Chlamydophila psittaci 08DC60]
Length = 477
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 175/396 (44%), Gaps = 43/396 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ +
Sbjct: 56 TL-----RKNPSLSEIAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKKHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTP--VLGLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P V G ++E L Y +++++++++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVVQGQLSIEDLL-AYNYTNLSSESRIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
L + + G+GGA +A+A GA++ IF+
Sbjct: 327 NILLQNKHVGIVGSGGAAKAIATTFADSGAQISIFN 362
>gi|71019047|ref|XP_759754.1| hypothetical protein UM03607.1 [Ustilago maydis 521]
gi|74701529|sp|Q4P8F6.1|ARO1_USTMA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|46099277|gb|EAK84510.1| hypothetical protein UM03607.1 [Ustilago maydis 521]
Length = 1715
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 176/399 (44%), Gaps = 45/399 (11%)
Query: 29 MYQAKAEGADVVEIRLDCIN-NFQP------------GKDLEIILTKKPLPVLIVYRPKW 75
+ ++ G+D +E R D +N + QP L + + LP++ R
Sbjct: 1177 LIRSMESGSDALEFRADLLNPSGQPVTTPQIPPTEYVKNQLAALRHRTSLPIVFTVRTHS 1236
Query: 76 AGGLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN--- 131
GG++ +G +H+ E + LA +Y+D EL ++L + + ++ I S +
Sbjct: 1237 QGGMFPDGKQHEYFELISLALRHACEYIDLELGWDDDLLSAVVQA-KGNSQIIASWHDWS 1295
Query: 132 --LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-PIIAYSV 188
LD E+ S + R A II ++ D + R +S P++A ++
Sbjct: 1296 GRLDWESESTAKIYEKACRFGDI-AKIIGKATTMEDNYSLERFRAKVSATATKPLLAVNM 1354
Query: 189 GERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISK 246
G G +S++++P F + + P P S RQ + AD + F L
Sbjct: 1355 GSVGQLSRIVNPVFTPI----THEAMPFKAAPGQLSFRQVQTALSLIGQADARRFALFGS 1410
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPYKEAVMK 305
P+GHS P+LHN F + Y + ++ + + SPDF G SV P+K ++K
Sbjct: 1411 PIGHSLSPLLHNTGFAALGLPHQYELLESTEINDAVAAFVRSPDFGGASVTIPHKLNIIK 1470
Query: 306 FCDEVHPLAQAIAAVNTIIR-RPSDG---KLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
DEV A+ I AVNTII R + G L+G NTD A T +++ T
Sbjct: 1471 LLDEVTDEAKTIGAVNTIIPIRDAQGVVTSLVGDNTDWIAIETLARRSLR-------TVH 1523
Query: 362 FGSP-LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD 398
P L G ++ GAGG+ RA F G R+++F+
Sbjct: 1524 LADPNLTG---LVIGAGGSARAALFALYRLGVKRILLFN 1559
>gi|423650199|ref|ZP_17625769.1| shikimate dehydrogenase [Bacillus cereus VD169]
gi|401282617|gb|EJR88516.1| shikimate dehydrogenase [Bacillus cereus VD169]
Length = 277
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL G+ +L G+GGA RA+ F G + +
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEI 147
>gi|423585186|ref|ZP_17561273.1| shikimate dehydrogenase [Bacillus cereus VD045]
gi|401233829|gb|EJR40315.1| shikimate dehydrogenase [Bacillus cereus VD045]
Length = 277
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL G+ +L G+GGA RA+ F G +
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVK 145
>gi|358399107|gb|EHK48450.1| hypothetical protein TRIATDRAFT_236452 [Trichoderma atroviride IMI
206040]
Length = 1570
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 166/372 (44%), Gaps = 35/372 (9%)
Query: 37 ADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLY-EGDEHKRLEALH 92
+D VE+R+D +++ QP K + ++ P++ R + GG + + D RLE
Sbjct: 1069 SDAVELRVDLLHDVQPEAVMKQVSLLRYVTGKPIIFTVRSESQGGKFPDNDNELRLELYR 1128
Query: 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLD-CETPSEEDLGYLVSRMQA 151
LA +G +Y+D E+ I+ Q G+ I++ + D S ++ ++ + +A
Sbjct: 1129 LALRMGVEYIDLEVTSTDEIM--QEVRDNRGSSVIITSHHDPAGALSWKNASWIAAYNRA 1186
Query: 152 TG-ADIIKLV---FSVNDITEIARI-FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGAL 206
D+IKLV SV+D ++ R ++L+ PIIA ++G G +S++L NG L
Sbjct: 1187 LQYGDVIKLVGTARSVDDNFDLIRFKSRMLAAQPTPIIALNMGSAGKLSRVL----NGFL 1242
Query: 207 VYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRH 263
S P P + +RQ + + + F L KP+ S+ P LHN F
Sbjct: 1243 TPVSHPALPFKAAPGQLSAAEIRQGLSLLG-EIEPRNFYLFGKPISKSRSPALHNTLFGQ 1301
Query: 264 VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 323
Y + D ++ + DF G SV P K+ +M DE+ A+ I AVNT+
Sbjct: 1302 TGLPHHYQRLETDKVEDVVEVLRAADFGGASVTIPLKQDIMAHLDELTDAAKVIGAVNTV 1361
Query: 324 IRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGA 379
+ + +LIG NTD + + + A + +A+ + G GG
Sbjct: 1362 VPVADESLGRQRLIGDNTDWKGMVHVLRKAGVRTQAGDASAA-----------VIGTGGT 1410
Query: 380 GRALAFGAKSRG 391
RA F + G
Sbjct: 1411 SRAAIFALNALG 1422
>gi|229071841|ref|ZP_04205054.1| Shikimate dehydrogenase [Bacillus cereus F65185]
gi|423437780|ref|ZP_17414761.1| shikimate dehydrogenase [Bacillus cereus BAG4X12-1]
gi|228711271|gb|EEL63233.1| Shikimate dehydrogenase [Bacillus cereus F65185]
gi|401120935|gb|EJQ28731.1| shikimate dehydrogenase [Bacillus cereus BAG4X12-1]
Length = 277
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL G+ +L G+GGA RA+ F G +
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVK 145
>gi|30022412|ref|NP_834043.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 14579]
gi|206969455|ref|ZP_03230409.1| shikimate 5-dehydrogenase [Bacillus cereus AH1134]
gi|218234390|ref|YP_002369144.1| shikimate 5-dehydrogenase [Bacillus cereus B4264]
gi|228960604|ref|ZP_04122251.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229048041|ref|ZP_04193616.1| Shikimate dehydrogenase [Bacillus cereus AH676]
gi|229111808|ref|ZP_04241354.1| Shikimate dehydrogenase [Bacillus cereus Rock1-15]
gi|229129615|ref|ZP_04258583.1| Shikimate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|229146906|ref|ZP_04275270.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|229152538|ref|ZP_04280728.1| Shikimate dehydrogenase [Bacillus cereus m1550]
gi|229180612|ref|ZP_04307953.1| Shikimate dehydrogenase [Bacillus cereus 172560W]
gi|296504827|ref|YP_003666527.1| shikimate 5-dehydrogenase [Bacillus thuringiensis BMB171]
gi|365158876|ref|ZP_09355066.1| shikimate dehydrogenase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411869|ref|ZP_17388989.1| shikimate dehydrogenase [Bacillus cereus BAG3O-2]
gi|423432345|ref|ZP_17409349.1| shikimate dehydrogenase [Bacillus cereus BAG4O-1]
gi|423631057|ref|ZP_17606804.1| shikimate dehydrogenase [Bacillus cereus VD154]
gi|423640585|ref|ZP_17616203.1| shikimate dehydrogenase [Bacillus cereus VD166]
gi|423657290|ref|ZP_17632589.1| shikimate dehydrogenase [Bacillus cereus VD200]
gi|81580465|sp|Q818D0.1|AROE_BACCR RecName: Full=Shikimate dehydrogenase
gi|226724116|sp|B7HCW1.1|AROE_BACC4 RecName: Full=Shikimate dehydrogenase
gi|29897970|gb|AAP11244.1| Shikimate 5-dehydrogenase [Bacillus cereus ATCC 14579]
gi|206735143|gb|EDZ52311.1| shikimate 5-dehydrogenase [Bacillus cereus AH1134]
gi|218162347|gb|ACK62339.1| shikimate dehydrogenase [Bacillus cereus B4264]
gi|228602855|gb|EEK60335.1| Shikimate dehydrogenase [Bacillus cereus 172560W]
gi|228630904|gb|EEK87543.1| Shikimate dehydrogenase [Bacillus cereus m1550]
gi|228636505|gb|EEK92971.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|228653732|gb|EEL09602.1| Shikimate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|228671564|gb|EEL26862.1| Shikimate dehydrogenase [Bacillus cereus Rock1-15]
gi|228723285|gb|EEL74655.1| Shikimate dehydrogenase [Bacillus cereus AH676]
gi|228799083|gb|EEM46053.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|296325879|gb|ADH08807.1| shikimate 5-dehydrogenase [Bacillus thuringiensis BMB171]
gi|363626246|gb|EHL77243.1| shikimate dehydrogenase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103937|gb|EJQ11914.1| shikimate dehydrogenase [Bacillus cereus BAG3O-2]
gi|401117101|gb|EJQ24939.1| shikimate dehydrogenase [Bacillus cereus BAG4O-1]
gi|401264424|gb|EJR70536.1| shikimate dehydrogenase [Bacillus cereus VD154]
gi|401279646|gb|EJR85568.1| shikimate dehydrogenase [Bacillus cereus VD166]
gi|401290033|gb|EJR95737.1| shikimate dehydrogenase [Bacillus cereus VD200]
Length = 277
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL G+ +L G+GGA RA+ F G + +
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEI 147
>gi|423452362|ref|ZP_17429215.1| shikimate dehydrogenase [Bacillus cereus BAG5X1-1]
gi|423470556|ref|ZP_17447300.1| shikimate dehydrogenase [Bacillus cereus BAG6O-2]
gi|423521807|ref|ZP_17498280.1| shikimate dehydrogenase [Bacillus cereus HuA4-10]
gi|401140000|gb|EJQ47557.1| shikimate dehydrogenase [Bacillus cereus BAG5X1-1]
gi|401176469|gb|EJQ83664.1| shikimate dehydrogenase [Bacillus cereus HuA4-10]
gi|402436222|gb|EJV68254.1| shikimate dehydrogenase [Bacillus cereus BAG6O-2]
Length = 277
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEI 147
>gi|423673876|ref|ZP_17648815.1| shikimate dehydrogenase [Bacillus cereus VDM062]
gi|401310242|gb|EJS15567.1| shikimate dehydrogenase [Bacillus cereus VDM062]
Length = 277
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYYAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEI 147
>gi|228954621|ref|ZP_04116645.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229192547|ref|ZP_04319508.1| Shikimate dehydrogenase [Bacillus cereus ATCC 10876]
gi|423426468|ref|ZP_17403499.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-2]
gi|423502980|ref|ZP_17479572.1| shikimate dehydrogenase [Bacillus cereus HD73]
gi|449091298|ref|YP_007423739.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|228590854|gb|EEK48712.1| Shikimate dehydrogenase [Bacillus cereus ATCC 10876]
gi|228805067|gb|EEM51662.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|401111215|gb|EJQ19114.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-2]
gi|402459201|gb|EJV90938.1| shikimate dehydrogenase [Bacillus cereus HD73]
gi|449025055|gb|AGE80218.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 277
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL G+ +L G+GGA RA+ F G + +
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEI 147
>gi|428180770|gb|EKX49636.1| hypothetical protein GUITHDRAFT_67756, partial [Guillardia theta
CCMP2712]
Length = 1505
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 174/397 (43%), Gaps = 35/397 (8%)
Query: 15 APLMAQSVEQVLS--NMYQAKA------EGADVVEIRLDCINN---FQPGKDLEIILTKK 63
AP++ S+ L+ +M +A + GADV+E R+D +++ I+
Sbjct: 979 APVVEDSITISLTYPDMKEASSYIPEIERGADVLEFRVDLLSDCSLLNARLQHAILRRVA 1038
Query: 64 PLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG 123
LP+L R GG + G E + L L L LG ++VD E S + K +
Sbjct: 1039 TLPILWTVRSVSQGGKFAGSEEEMLALLQLGLRLGCEFVDVE-SCWSTAMCKAVVDKKGS 1097
Query: 124 TRFIVSCNLDCE---TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIA----RIFQLL 176
+R + S + E T E + +L RMQ GAD++K+ T++A I +
Sbjct: 1098 SRVVASFHDFSERAYTAEELEKLFLRLRMQG-GADVVKVAIRTTKATQVADMQHAINRFR 1156
Query: 177 SHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE-HIN 235
+ +P + +GE G +S++L+ KF + L GT G E +R+ KVE +
Sbjct: 1157 ARSSLPAVGLCMGEEGKLSRVLN-KFLTFSTHPLLPGTAAPGQLVAEDIRR-LKVELGLL 1214
Query: 236 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGI-YVPMFVDDLKKFFSTYSSPDFAGFS 294
T F L P+ S P +HN F G Y D+ T SS F G S
Sbjct: 1215 PATCSFFLFGSPIAKSASPAMHNAAFAACGLKGWSYERCETADVSVALETISSASFGGGS 1274
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTI-IRRPSDGK--LIGYNTDCEASITAIEDAIK 351
V P KE ++ + A+ I AVNTI ++R DG LIG NTD A ++D +
Sbjct: 1275 VTIPLKEELLPHMHILTDSARRIGAVNTITVKRGGDGSRILIGDNTDWVAIHRLVQDRLN 1334
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAK 388
R G G P +L GAGG RA + K
Sbjct: 1335 MRRLAQG----GEP----RVLLVGAGGTARAAMYALK 1363
>gi|302339344|ref|YP_003804550.1| shikimate 5-dehydrogenase [Spirochaeta smaragdinae DSM 11293]
gi|301636529|gb|ADK81956.1| shikimate 5-dehydrogenase [Spirochaeta smaragdinae DSM 11293]
Length = 492
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 164/364 (45%), Gaps = 23/364 (6%)
Query: 38 DVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97
+ EIR D + + K L I+ + LP++ R GG+++ E +R++ L A +
Sbjct: 26 ECAEIRFDHLVPEEREKAL-ILPSCSDLPLIATARLPKDGGVWKEGEEERIDLLRKAAES 84
Query: 98 GADYVDFELKVASNILGKQYSSHQSGT--RFIVSCNLDCETPSEEDLGYLVSRMQATGAD 155
G +VD E ++L + + SG R I S + E L +V + GA
Sbjct: 85 GFAFVDLEADQPRSLL-RSFVELLSGYGGRLIASFHDFTSFTDERTLFSMVEEAEGLGAI 143
Query: 156 IIKLVFSVNDITEIARIFQLLSHCQVPI--IAYSVGERGLVSQLLSPKFNGALVY-GSLK 212
V ++ +A L + P I ++G G+ ++ F L + +
Sbjct: 144 PKAAVMIDGSVSLLAFTRAALKLKERPAERILVAMGSFGVPVRIAYRHFGSMLTFCAPAE 203
Query: 213 GTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP 272
G + E+L Y + I+ +++FG+I PV H++ P +HN FR + ++G+Y+P
Sbjct: 204 KIAAPGQLSAEALAFPYALSRISDKSRLFGIIGNPVLHTRSPEIHNSAFRSIGFDGLYLP 263
Query: 273 MFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKL 332
DD F + GFSV P+KE ++ EV +AI + NT+ RR +
Sbjct: 264 FPTDDTVAFMEIARLLEIGGFSVTVPFKEEIIGRLHEVDENVRAIGSCNTVFRRGHE--F 321
Query: 333 IGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
G NTD + + ++ + +RG GR ++ G+GGA R++A +S
Sbjct: 322 HGTNTDYDGFLAPLKIRLGKRG-------------GRALMI-GSGGAARSVAVALRSLFD 367
Query: 393 RVVI 396
VV+
Sbjct: 368 SVVV 371
>gi|423483917|ref|ZP_17460607.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-2]
gi|401141468|gb|EJQ49023.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-2]
Length = 277
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEVDPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLVDVGVK 145
>gi|229135160|ref|ZP_04263960.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST196]
gi|228648288|gb|EEL04323.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST196]
Length = 277
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEI 147
>gi|229013555|ref|ZP_04170688.1| Shikimate dehydrogenase [Bacillus mycoides DSM 2048]
gi|229062033|ref|ZP_04199358.1| Shikimate dehydrogenase [Bacillus cereus AH603]
gi|229169082|ref|ZP_04296797.1| Shikimate dehydrogenase [Bacillus cereus AH621]
gi|423519034|ref|ZP_17495515.1| shikimate dehydrogenase [Bacillus cereus HuA2-4]
gi|423591670|ref|ZP_17567701.1| shikimate dehydrogenase [Bacillus cereus VD048]
gi|423598349|ref|ZP_17574349.1| shikimate dehydrogenase [Bacillus cereus VD078]
gi|423660821|ref|ZP_17635990.1| shikimate dehydrogenase [Bacillus cereus VDM022]
gi|423669920|ref|ZP_17644949.1| shikimate dehydrogenase [Bacillus cereus VDM034]
gi|228614310|gb|EEK71420.1| Shikimate dehydrogenase [Bacillus cereus AH621]
gi|228717185|gb|EEL68860.1| Shikimate dehydrogenase [Bacillus cereus AH603]
gi|228747715|gb|EEL97585.1| Shikimate dehydrogenase [Bacillus mycoides DSM 2048]
gi|401160089|gb|EJQ67468.1| shikimate dehydrogenase [Bacillus cereus HuA2-4]
gi|401231803|gb|EJR38305.1| shikimate dehydrogenase [Bacillus cereus VD048]
gi|401236619|gb|EJR43076.1| shikimate dehydrogenase [Bacillus cereus VD078]
gi|401299047|gb|EJS04647.1| shikimate dehydrogenase [Bacillus cereus VDM034]
gi|401300862|gb|EJS06451.1| shikimate dehydrogenase [Bacillus cereus VDM022]
Length = 277
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEI 147
>gi|423561197|ref|ZP_17537473.1| shikimate dehydrogenase [Bacillus cereus MSX-A1]
gi|401201454|gb|EJR08319.1| shikimate dehydrogenase [Bacillus cereus MSX-A1]
Length = 277
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL G+ +L GAGGA RA+ F G + V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEV 147
>gi|423489518|ref|ZP_17466200.1| shikimate dehydrogenase [Bacillus cereus BtB2-4]
gi|423495241|ref|ZP_17471885.1| shikimate dehydrogenase [Bacillus cereus CER057]
gi|423497965|ref|ZP_17474582.1| shikimate dehydrogenase [Bacillus cereus CER074]
gi|401151334|gb|EJQ58786.1| shikimate dehydrogenase [Bacillus cereus CER057]
gi|401161252|gb|EJQ68619.1| shikimate dehydrogenase [Bacillus cereus CER074]
gi|402431754|gb|EJV63818.1| shikimate dehydrogenase [Bacillus cereus BtB2-4]
Length = 278
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 90/160 (56%), Gaps = 17/160 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSV 295
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEEALGEAVKGLKALGISGFNV 62
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TTPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE--- 116
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 117 --------DPLQEKRILLIGAGGASRAIYFSLADVGVKEI 148
>gi|229157949|ref|ZP_04286021.1| Shikimate dehydrogenase [Bacillus cereus ATCC 4342]
gi|228625509|gb|EEK82264.1| Shikimate dehydrogenase [Bacillus cereus ATCC 4342]
Length = 277
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G R
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVR 145
>gi|47569330|ref|ZP_00240014.1| shikimate 5-dehydrogenase [Bacillus cereus G9241]
gi|47554001|gb|EAL12368.1| shikimate 5-dehydrogenase [Bacillus cereus G9241]
Length = 277
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G R
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVR 145
>gi|423385836|ref|ZP_17363092.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-2]
gi|401635892|gb|EJS53647.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-2]
Length = 277
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL G+ +L GAGGA RA+ F G +
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVK 145
>gi|423527807|ref|ZP_17504252.1| shikimate dehydrogenase [Bacillus cereus HuB1-1]
gi|402451470|gb|EJV83289.1| shikimate dehydrogenase [Bacillus cereus HuB1-1]
Length = 277
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL G+ +L GAGGA RA+ F G +
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVK 145
>gi|228941501|ref|ZP_04104051.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228974431|ref|ZP_04134999.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981026|ref|ZP_04141328.1| Shikimate dehydrogenase [Bacillus thuringiensis Bt407]
gi|384188408|ref|YP_005574304.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676723|ref|YP_006929094.1| shikimate dehydrogenase AroE [Bacillus thuringiensis Bt407]
gi|452200800|ref|YP_007480881.1| Shikimate 5-dehydrogenase I alpha [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228778686|gb|EEM26951.1| Shikimate dehydrogenase [Bacillus thuringiensis Bt407]
gi|228785267|gb|EEM33278.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818151|gb|EEM64226.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942117|gb|AEA18013.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409175852|gb|AFV20157.1| shikimate dehydrogenase AroE [Bacillus thuringiensis Bt407]
gi|452106193|gb|AGG03133.1| Shikimate 5-dehydrogenase I alpha [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 277
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL G+ +L GAGGA RA+ F G +
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVK 145
>gi|228987587|ref|ZP_04147703.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772128|gb|EEM20578.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 277
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIAPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G R
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVR 145
>gi|158319101|ref|YP_001511608.1| shikimate 5-dehydrogenase [Alkaliphilus oremlandii OhILAs]
gi|166988268|sp|A8MEE1.1|AROE_ALKOO RecName: Full=Shikimate dehydrogenase
gi|158139300|gb|ABW17612.1| shikimate 5-dehydrogenase [Alkaliphilus oremlandii OhILAs]
Length = 286
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 17/162 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I +TK+ G+I +P+ S P +HN F+++N N IY+P V DL K F
Sbjct: 5 ITDETKLTGIIGRPIKQSFSPKIHNGAFQYLNLNYIYIPFEVVQQDLSKTVEAMKVLKFR 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K VM + DEV A+ I AVNT++ + +GKL+G+NTD + + ++ED
Sbjct: 65 GFNVTMPHKREVMNYLDEVSENAKIIGAVNTVVNQ--NGKLVGHNTDGKGYVQSLEDE-- 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
G + + FV+AGAGGA R++A GA+
Sbjct: 121 -----------GIYVKEKTFVIAGAGGAARSVAVQLALDGAK 151
>gi|329943069|ref|ZP_08291843.1| shikimate 5-dehydrogenase [Chlamydophila psittaci Cal10]
gi|332287652|ref|YP_004422553.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 6BC]
gi|384450809|ref|YP_005663409.1| 3-dehydroquinate dehydratase [Chlamydophila psittaci 6BC]
gi|384451804|ref|YP_005664402.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 01DC11]
gi|384453757|ref|YP_005666353.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci C19/98]
gi|384454736|ref|YP_005667331.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 02DC15]
gi|392376882|ref|YP_004064660.1| shikimate 5-dehydrogenase [Chlamydophila psittaci RD1]
gi|407454281|ref|YP_006733389.1| shikimate 5-dehydrogenase [Chlamydia psittaci 84/55]
gi|407456971|ref|YP_006735544.1| shikimate 5-dehydrogenase [Chlamydia psittaci VS225]
gi|313848225|emb|CBY17226.1| shikimate 5-dehydrogenase [Chlamydophila psittaci RD1]
gi|325506567|gb|ADZ18205.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 6BC]
gi|328814616|gb|EGF84606.1| shikimate 5-dehydrogenase [Chlamydophila psittaci Cal10]
gi|328914903|gb|AEB55736.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila psittaci 6BC]
gi|334692538|gb|AEG85757.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci C19/98]
gi|334693514|gb|AEG86732.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 01DC11]
gi|334694493|gb|AEG87710.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 02DC15]
gi|405781040|gb|AFS19790.1| shikimate 5-dehydrogenase [Chlamydia psittaci 84/55]
gi|405784232|gb|AFS22979.1| shikimate 5-dehydrogenase [Chlamydia psittaci VS225]
Length = 477
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 175/396 (44%), Gaps = 43/396 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ +
Sbjct: 56 TL-----RKNPSLSEIAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKKHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++++++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVAQGQLSIEDLL-AYNYTNLSSESRIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
L + + G+GGA +A+A GA++ IF+
Sbjct: 327 NILLQNKHVGIVGSGGAAKAIATTFADSGAQISIFN 362
>gi|218899502|ref|YP_002447913.1| shikimate 5-dehydrogenase [Bacillus cereus G9842]
gi|228967401|ref|ZP_04128434.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402564189|ref|YP_006606913.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-771]
gi|226724115|sp|B7IYI7.1|AROE_BACC2 RecName: Full=Shikimate dehydrogenase
gi|218543181|gb|ACK95575.1| shikimate 5-dehydrogenase [Bacillus cereus G9842]
gi|228792289|gb|EEM39858.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401792841|gb|AFQ18880.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-771]
Length = 277
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL G+ +L GAGGA RA+ F G +
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVK 145
>gi|228910172|ref|ZP_04073991.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|423358629|ref|ZP_17336132.1| shikimate dehydrogenase [Bacillus cereus VD022]
gi|228849455|gb|EEM94290.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|401084501|gb|EJP92747.1| shikimate dehydrogenase [Bacillus cereus VD022]
Length = 277
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL G+ +L GAGGA RA+ F G +
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVK 145
>gi|380473533|emb|CCF46240.1| pentafunctional AROM polypeptide [Colletotrichum higginsianum]
Length = 1581
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 166/372 (44%), Gaps = 30/372 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
GAD VE+R+D + ++ + ++ + +P++ R K GG + D + + L+
Sbjct: 1076 GADAVELRVDLLQDYSEDSVAHQVALLRSVADVPIIFTLRTKAQGGKFPDDAYDQGLGLY 1135
Query: 93 L-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
A +G +++D E+ + ++ + ++ R I S + S ++ ++ +A
Sbjct: 1136 RKAIRMGVEFIDVEMTLPERVI-QTVVENKGPCRIIASHHDPTGNLSWKNGSWIPFYNKA 1194
Query: 152 -TGADIIKLV---FSVNDITEIARI-FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGAL 206
D+IKLV + D ++A ++LS + PIIA ++G G +S++L NG L
Sbjct: 1195 LQWGDVIKLVGVAQRIEDNYDLAHFKSEMLSSHKTPIIALNMGTAGKLSRVL----NGCL 1250
Query: 207 VYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRH 263
S P P + +RQ + D F L KP+ S+ P LHN F
Sbjct: 1251 TPVSHPALPFKAAPGQLSAAEIRQALALLG-GIDPLSFYLFGKPISASRSPALHNTLFAL 1309
Query: 264 VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 323
Y D+ +PDF G SV P K +MK DE+ A+ I AVNTI
Sbjct: 1310 AGLPHEYFRKETDNAADVREIIRAPDFGGASVTIPLKLDIMKEIDEISEAARVIGAVNTI 1369
Query: 324 IRR----PSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGA 379
+ SD KL+G NTD + +++ A G AS S ++ G+GG
Sbjct: 1370 VPTRASGSSDTKLVGDNTDWSGMVHSLQSA--------GVASRSSTGGQCSAMVIGSGGT 1421
Query: 380 GRALAFGAKSRG 391
RA F ++ G
Sbjct: 1422 TRAAIFALRALG 1433
>gi|423463981|ref|ZP_17440749.1| shikimate dehydrogenase [Bacillus cereus BAG6O-1]
gi|402420248|gb|EJV52519.1| shikimate dehydrogenase [Bacillus cereus BAG6O-1]
Length = 276
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 15/156 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGF 297
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKTLGISGFNVTT 62
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVK 144
>gi|229006675|ref|ZP_04164309.1| Shikimate dehydrogenase [Bacillus mycoides Rock1-4]
gi|228754536|gb|EEM03947.1| Shikimate dehydrogenase [Bacillus mycoides Rock1-4]
Length = 277
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F ++N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEYLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++MK+ DE+ PLA+ I AVNT++ R DGKLIGYNTD + +++ KE
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 117 --------PLYQKRILLLGAGGACRAIYFSLADAGVKEI 147
>gi|408395815|gb|EKJ74988.1| hypothetical protein FPSE_04808 [Fusarium pseudograminearum CS3096]
Length = 1568
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 171/371 (46%), Gaps = 28/371 (7%)
Query: 36 GADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEAL 91
G+D VE+R+D + + + + + P++ R + GG + ++ LE
Sbjct: 1072 GSDAVELRVDLLQDRSVDSVIRQVSTLRASAKKPIVFTLRTESQGGKFPDSAYEEGLELY 1131
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
LA +G +Y+D E+ + I+ K + + +R I S + T S ++ ++ +A
Sbjct: 1132 RLAVRMGMEYIDVEMTLPDEII-KTVTESRGYSRIIASHHDPKGTMSWKNASWIQYYNRA 1190
Query: 152 TG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPKFNGAL 206
DIIKLV + D ++AR + Q P+I+ ++G+ G +S++L+ +F +
Sbjct: 1191 LQYGDIIKLVGIARTPEDNFDLARFKARMQEAQKTPMISMNMGKAGKLSRVLN-RFLTPV 1249
Query: 207 VYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNY 266
+ +L G + +RQ + + + F L KP+ S+ P LHN F+
Sbjct: 1250 SHPALPFKAAPGQMSAAEIRQALALLG-DLEPHNFYLFGKPISASRSPALHNTLFKQTGL 1308
Query: 267 NGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR- 325
Y + D+++ SPDF G SV P K +M DE+ A+ I AVNT++
Sbjct: 1309 PHQYRRLETDNIEDVRDVLKSPDFGGASVTIPLKLDIMGKLDELSDAARTIGAVNTVVPF 1368
Query: 326 -RPSDG---KLIGYNTDCEASITAIEDA-IKERGYKNGTASFGSPLAGRMFVLAGAGGAG 380
+P D +L+G NTD + A+ A I+ + N A+ ++ G+GG
Sbjct: 1369 GKPDDNGCRRLLGDNTDWRGMVHALRHAGIQGQDTDNKGAA----------MVVGSGGTT 1418
Query: 381 RALAFGAKSRG 391
RA F S G
Sbjct: 1419 RAAIFALHSLG 1429
>gi|423406241|ref|ZP_17383390.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-3]
gi|401660235|gb|EJS77717.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-3]
Length = 277
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 16/149 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H++ + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLDMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQAVSSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAF 385
PL G+ +L GAGGA RA+ F
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYF 137
>gi|423395366|ref|ZP_17372567.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-1]
gi|401654777|gb|EJS72316.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-1]
Length = 277
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 16/149 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H++ + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLDMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++
Sbjct: 63 TPHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ--------- 111
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAF 385
A PL G+ +L GAGGA RA+ F
Sbjct: 112 ---AVSSEPLQGKRILLLGAGGASRAIYF 137
>gi|229198462|ref|ZP_04325166.1| Shikimate dehydrogenase [Bacillus cereus m1293]
gi|423573986|ref|ZP_17550105.1| shikimate dehydrogenase [Bacillus cereus MSX-D12]
gi|423604016|ref|ZP_17579909.1| shikimate dehydrogenase [Bacillus cereus VD102]
gi|228584965|gb|EEK43079.1| Shikimate dehydrogenase [Bacillus cereus m1293]
gi|401212555|gb|EJR19298.1| shikimate dehydrogenase [Bacillus cereus MSX-D12]
gi|401245702|gb|EJR52055.1| shikimate dehydrogenase [Bacillus cereus VD102]
Length = 277
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAYYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|366999921|ref|XP_003684696.1| hypothetical protein TPHA_0C01060 [Tetrapisispora phaffii CBS 4417]
gi|357522993|emb|CCE62262.1| hypothetical protein TPHA_0C01060 [Tetrapisispora phaffii CBS 4417]
Length = 1578
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 168/371 (45%), Gaps = 45/371 (12%)
Query: 36 GADVVEIRLDCINNFQPG---KDLEII-LTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G D VE+R+D + N++P K L I+ + LP++ R K GG + + ++ + L
Sbjct: 1089 GCDAVEVRIDHLANYEPAFISKQLSILRIATDGLPIIFTIRTKKQGGKFPDEVYESMRHL 1148
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYS--SHQSGTRFIVSCNLDCETPSEEDLGYLVSR 148
LA G D++D EL + +++ QY + + T+ I S + S +D +
Sbjct: 1149 FTLALKSGIDFIDMELTLPTDV---QYHILNRKGHTKIIGSHHDFSGEYSWDDSEWETRY 1205
Query: 149 MQATG--ADIIKLV-----FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPK 201
QA DIIK V F N + E R +H P+IA ++ E G +S++L+P
Sbjct: 1206 NQALSLDVDIIKFVGSALKFEDNLLLETFRN----NHKAKPLIAINMRELGKISRVLNP- 1260
Query: 202 FNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPILHNP 259
L + + P P +LR+ K+ F ++ P+GHS+ PILHN
Sbjct: 1261 ---ILTPITSELLPNAAAPGQLTLREINKIYSTLGGFSPLNFYVVGSPIGHSRSPILHNT 1317
Query: 260 TFRHVNYNGIYVPMFVDDLKKFFSTY--SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317
+ + + D ++K S + G +V P K +MK+ +++ P A I
Sbjct: 1318 GYEILGLPHKFDKFETDSIEKVKSELLDGESNLGGLAVTIPLKLEIMKYLNDLTPAASTI 1377
Query: 318 AAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP--LAGRMFVLAG 375
A+NTII +GK +G NTD G KN AS G P + G ++ G
Sbjct: 1378 GAINTIIPL-GNGKFLGDNTDW-------------LGIKNAFASNGVPENVNGAAGLVIG 1423
Query: 376 AGGAGRALAFG 386
AGG RA +
Sbjct: 1424 AGGTSRAAIYA 1434
>gi|224369347|ref|YP_002603511.1| hypothetical protein HRM2_22490 [Desulfobacterium autotrophicum
HRM2]
gi|223692064|gb|ACN15347.1| AroE1 [Desulfobacterium autotrophicum HRM2]
Length = 271
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
+N+DT+++ L PV HS GP++HN F+ N NG+Y+ V + ++ + AG
Sbjct: 2 LNSDTRLYALFGDPVAHSLGPVMHNAAFQKANINGVYLAFRVPRIDDAIASMKALGIAGA 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE V+ D + PLA+ + AVNTII R DG L GYNTDC ++ +E +
Sbjct: 62 SVTIPHKETVIPLLDRIDPLARGMGAVNTIINR--DGMLFGYNTDCMGAVDPLEGVCDLK 119
Query: 354 GYK 356
G +
Sbjct: 120 GRR 122
>gi|229117832|ref|ZP_04247196.1| Shikimate dehydrogenase [Bacillus cereus Rock1-3]
gi|423377808|ref|ZP_17355092.1| shikimate dehydrogenase [Bacillus cereus BAG1O-2]
gi|423547637|ref|ZP_17523995.1| shikimate dehydrogenase [Bacillus cereus HuB5-5]
gi|423622578|ref|ZP_17598356.1| shikimate dehydrogenase [Bacillus cereus VD148]
gi|228665629|gb|EEL21107.1| Shikimate dehydrogenase [Bacillus cereus Rock1-3]
gi|401179358|gb|EJQ86531.1| shikimate dehydrogenase [Bacillus cereus HuB5-5]
gi|401260698|gb|EJR66866.1| shikimate dehydrogenase [Bacillus cereus VD148]
gi|401636074|gb|EJS53828.1| shikimate dehydrogenase [Bacillus cereus BAG1O-2]
Length = 276
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 15/156 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGF 297
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTT 62
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVK 144
>gi|229076009|ref|ZP_04208982.1| Shikimate dehydrogenase [Bacillus cereus Rock4-18]
gi|229098806|ref|ZP_04229744.1| Shikimate dehydrogenase [Bacillus cereus Rock3-29]
gi|229104966|ref|ZP_04235622.1| Shikimate dehydrogenase [Bacillus cereus Rock3-28]
gi|407706862|ref|YP_006830447.1| stage IV sporulation protein FB [Bacillus thuringiensis MC28]
gi|423440916|ref|ZP_17417822.1| shikimate dehydrogenase [Bacillus cereus BAG4X2-1]
gi|423448916|ref|ZP_17425795.1| shikimate dehydrogenase [Bacillus cereus BAG5O-1]
gi|423533344|ref|ZP_17509762.1| shikimate dehydrogenase [Bacillus cereus HuB2-9]
gi|423541401|ref|ZP_17517792.1| shikimate dehydrogenase [Bacillus cereus HuB4-10]
gi|423615324|ref|ZP_17591158.1| shikimate dehydrogenase [Bacillus cereus VD115]
gi|228678460|gb|EEL32681.1| Shikimate dehydrogenase [Bacillus cereus Rock3-28]
gi|228684650|gb|EEL38590.1| Shikimate dehydrogenase [Bacillus cereus Rock3-29]
gi|228707121|gb|EEL59321.1| Shikimate dehydrogenase [Bacillus cereus Rock4-18]
gi|401129510|gb|EJQ37193.1| shikimate dehydrogenase [Bacillus cereus BAG5O-1]
gi|401172589|gb|EJQ79810.1| shikimate dehydrogenase [Bacillus cereus HuB4-10]
gi|401261003|gb|EJR67170.1| shikimate dehydrogenase [Bacillus cereus VD115]
gi|402417577|gb|EJV49877.1| shikimate dehydrogenase [Bacillus cereus BAG4X2-1]
gi|402463563|gb|EJV95263.1| shikimate dehydrogenase [Bacillus cereus HuB2-9]
Length = 276
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 15/156 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGF 297
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTT 62
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVK 144
>gi|310798573|gb|EFQ33466.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Glomerella graminicola
M1.001]
Length = 1579
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 163/372 (43%), Gaps = 30/372 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEAL 91
G+D VE+R+D + ++ + ++ + +P++ R K GG + D + + L
Sbjct: 1074 GSDAVELRVDLLQDYSEESVAHQVALLRSVANVPIIFTLRTKAQGGRFPDDAYDQGLGLY 1133
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP-SEEDLGYLVSRMQ 150
A +G +++D E+ + ++ Q G I++ + D + S +D ++ +
Sbjct: 1134 QKAIRMGVEFIDVEMTLPEQVI--QAVVENKGLCRIIASHHDPQGKLSWKDGSWIPFYNK 1191
Query: 151 A-TGADIIKLVFSVNDITEIARIFQ----LLSHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
A D+IKLV I + + Q +LS + PIIA ++G G +S++ FNG
Sbjct: 1192 ALQWGDVIKLVGIAQHIEDNYALAQFKSAMLSSHKTPIIALNMGTAGKLSRV----FNGC 1247
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPILHNPTFRH 263
L S P P S + K + + F L KP+ S+ P LHN F
Sbjct: 1248 LTPVSHPDLPFKAAPGQLSAAEIRKALALLGGISPQSFYLFGKPISASRSPALHNTLFAL 1307
Query: 264 VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 323
Y+ D +PDF G SV P K +MK DE+ A+ I AVNTI
Sbjct: 1308 TGLPHRYLLKETDSAADVREAIRAPDFGGASVTIPLKLDIMKEIDEISESARIIGAVNTI 1367
Query: 324 IRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGA 379
I +G KL+G NTD + +++ A G AS + R ++ G+GG
Sbjct: 1368 IPVRDNGDVNAKLVGDNTDWSGMVHSLQSA--------GVASRSATGVQRSAMVIGSGGT 1419
Query: 380 GRALAFGAKSRG 391
RA F + G
Sbjct: 1420 TRAAIFALHALG 1431
>gi|451856824|gb|EMD70115.1| hypothetical protein COCSADRAFT_217249 [Cochliobolus sativus ND90Pr]
Length = 1589
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 163/383 (42%), Gaps = 47/383 (12%)
Query: 36 GADVVEIRLDCINN--FQPG--------KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + QPG + L I+ T +PV+ R + GG + +
Sbjct: 1081 GSDAVELRIDLLEDPEGQPGLPTPDFVIEQLTILRTVTSIPVIFTLRTQAQGGKFPDQAY 1140
Query: 86 KRLEALHL---AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
EAL L A LG ++VD EL + ++L Q S G I++ + D +
Sbjct: 1141 D--EALTLYQTALRLGCEFVDLELTMPEHVL--QEISENRGFSEIIASHHDPKGELNWRN 1196
Query: 143 GYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQV----PIIAYSVGERGLVSQ 196
G +S+ +IKLV + + + + S Q P+IA ++GE+G +S+
Sbjct: 1197 GSWISQYNRALQYGTVIKLVGVAKSLEDNFALAEFKSWAQTAHPTPLIAINMGEKGKMSR 1256
Query: 197 LLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPIL 256
+L+ F + + L G + +R+ + TK F + P+ S P L
Sbjct: 1257 ILN-GFMTPVSHPLLPSATAPGQLSAVDIRRGLSLMG-EIPTKKFYIFGSPIAQSPSPRL 1314
Query: 257 HNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316
HN FR IY D+ F +PDF G SV P K+ V+ D V P +
Sbjct: 1315 HNTLFRETGLPHIYSRHETTDVNSFCDIIRTPDFGGASVTIPLKQDVIPLLDGVGPEVEV 1374
Query: 317 IAAVNTIIRRPS----DGK----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ S GK LIG NTD + + +A G GS L
Sbjct: 1375 IGAVNTIVPETSIDETTGKEVTRLIGRNTDYLGMVLILRNA--------GAQGSGSAL-- 1424
Query: 369 RMFVLAGAGGAGRALAFGAKSRG 391
+ G GG RA + K G
Sbjct: 1425 ----VIGGGGTSRAAIYALKEMG 1443
>gi|425770111|gb|EKV08585.1| Pentafunctional AROM polypeptide [Penicillium digitatum Pd1]
gi|425771658|gb|EKV10095.1| Pentafunctional AROM polypeptide [Penicillium digitatum PHI26]
Length = 1586
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 164/380 (43%), Gaps = 43/380 (11%)
Query: 36 GADVVEIRLDCINNFQPGKD----------LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + D L I+ LP++ R K GG + D H
Sbjct: 1075 GSDAVELRVDLLRDPTVDGDIPSVDYVNEQLSILRRSTTLPLIFTIRTKSQGGRFPDDAH 1134
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
++ LA G ++VD E+ +L + + + +R I S + T S ++ +
Sbjct: 1135 DAAIQLYRLAFRSGCEFVDLEIAFPDAML-RAVTEMKGYSRIIASHHDPMGTLSWANVSW 1193
Query: 145 LVSRMQATG-ADIIKLVFSVN--DITEIARIFQLLSH--CQVPIIAYSVGERGLVSQLLS 199
+ S +A D+IKLV N D R F+ + VP+IA ++G+ G +S++L
Sbjct: 1194 MQSYNRALEYGDVIKLVGVANSLDDNNALRKFKTWAEEAHDVPLIAINMGDSGQLSRIL- 1252
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKPVGHSKGPILH 257
NG + S P P S + + + + K F + PV S+ P LH
Sbjct: 1253 ---NGFMTPVSHPSLPFKAAPGQLSAAEIRRGLSLMGEIKAKKFAVFGSPVSGSRSPALH 1309
Query: 258 NPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
N F + Y + ++D+K F + DF G SV P K +M DEV A
Sbjct: 1310 NTLFGKMGLPHEYSRLETTNIEDVKDFIR---ASDFGGASVTIPLKLDIMPLLDEVAQEA 1366
Query: 315 QAIAAVNTIIRRPSDGK---LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF 371
+ I AVNTI+ P+ K LIGYNTD + + + +A +GS
Sbjct: 1367 EIIGAVNTIVPVPNGDKPPRLIGYNTDWQGMVRCMRNA----------GVYGS-TGNESA 1415
Query: 372 VLAGAGGAGRALAFGAKSRG 391
V+ G GG RA F G
Sbjct: 1416 VVIGGGGTARAAIFALHDMG 1435
>gi|333995685|ref|YP_004528298.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema azotonutricium ZAS-9]
gi|333734548|gb|AEF80497.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema azotonutricium ZAS-9]
Length = 504
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 168/390 (43%), Gaps = 42/390 (10%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LPVL 68
IC L +++ + + + Q + D+ E+R DC++ D ++ + P LPV+
Sbjct: 4 ICLCLTGKTLARDI-EVLQKYQKYVDIAELRADCLD-----PDERFLIRRFPEMAGLPVI 57
Query: 69 IVYRPKWAGGLYEGDEHKRL----EALHLAE-DLGADYVDFELKVASNILGKQYSSHQSG 123
+ R GG Y G E R+ + L AE D ++ +L+ + + ++ G
Sbjct: 58 LTIRRSLDGGKYVGGEGARITLLSKGLAFAEADRRRNFAYVDLEDDLYVPSLEEAARTYG 117
Query: 124 TRFIVSC-NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ-V 181
TR I S N++ + DL + ++ G +++K + + R++Q +
Sbjct: 118 TRIIRSYHNMNG---VDHDLAAKLRELRRVGDELVKAAVMPQSLDDTIRVYQAAKETSDL 174
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL-----GLPTVESLRQTYKVEHINA 236
I +G+ G+ +++L+ L Y ++KG P + G L + + I
Sbjct: 175 EKILLCMGDYGVSTRILAEPMGSYLSYTTVKGEPDMPAGASGQLDPRELAEQFHFREITG 234
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
TK+FG+ P+ S P N F + +Y+P D + +G SV
Sbjct: 235 KTKIFGVTGFPLKVSASPHFFNTVFDIEKTDAVYIPFPADSIHSLIRLAEEIRISGVSVT 294
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE+V+ F L Q+I A NTI+ +DG +GYNTD + G+
Sbjct: 295 VPYKESVLPFLFCKSDLVQSIGACNTIV-SSADG-WMGYNTDAQ-------------GFT 339
Query: 357 NGTASFG--SPLAGRMFVLAGAGGAGRALA 384
+ F L G+ + GAGG RA+A
Sbjct: 340 DSLLEFSGRKDLRGKRVTIVGAGGVSRAVA 369
>gi|423368385|ref|ZP_17345817.1| shikimate dehydrogenase [Bacillus cereus VD142]
gi|401080712|gb|EJP88996.1| shikimate dehydrogenase [Bacillus cereus VD142]
Length = 277
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVTIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEI 147
>gi|407459542|ref|YP_006737645.1| shikimate 5-dehydrogenase [Chlamydia psittaci M56]
gi|405786336|gb|AFS25081.1| shikimate 5-dehydrogenase [Chlamydia psittaci M56]
Length = 477
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 174/396 (43%), Gaps = 43/396 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ +
Sbjct: 56 TL-----RKNPSLSEMAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKKHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++ +++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVAQGQLSIEDLL-AYNYTNLSSEARIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLTPHELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
L + + G+GG+ +A+A GA++ IF+
Sbjct: 327 NILLQNKHVGIVGSGGSAKAIATTFADSGAQISIFN 362
>gi|406592611|ref|YP_006739791.1| shikimate 5-dehydrogenase [Chlamydia psittaci CP3]
gi|406594387|ref|YP_006741890.1| shikimate 5-dehydrogenase [Chlamydia psittaci MN]
gi|410858665|ref|YP_006974605.1| shikimate 5-dehydrogenase [Chlamydia psittaci 01DC12]
gi|405782819|gb|AFS21567.1| shikimate 5-dehydrogenase [Chlamydia psittaci MN]
gi|405788483|gb|AFS27226.1| shikimate 5-dehydrogenase [Chlamydia psittaci CP3]
gi|410811560|emb|CCO02213.1| shikimate 5-dehydrogenase [Chlamydia psittaci 01DC12]
Length = 477
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 175/396 (44%), Gaps = 43/396 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ +
Sbjct: 56 TL-----RKNPSLSEIAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKQHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++++++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVAQGQLSIEDLL-AYNYTNLSSESRIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
L + + G+GG+ +A+A GA++ IF+
Sbjct: 327 NILLQNKHVGIVGSGGSAKAIATTFADSGAQISIFN 362
>gi|206976069|ref|ZP_03236979.1| shikimate 5-dehydrogenase [Bacillus cereus H3081.97]
gi|217961824|ref|YP_002340394.1| shikimate 5-dehydrogenase [Bacillus cereus AH187]
gi|222097779|ref|YP_002531836.1| shikimate 5-dehydrogenase [Bacillus cereus Q1]
gi|229141072|ref|ZP_04269614.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|375286341|ref|YP_005106780.1| shikimate 5-dehydrogenase [Bacillus cereus NC7401]
gi|423354827|ref|ZP_17332452.1| shikimate dehydrogenase [Bacillus cereus IS075]
gi|423373787|ref|ZP_17351126.1| shikimate dehydrogenase [Bacillus cereus AND1407]
gi|423570574|ref|ZP_17546819.1| shikimate dehydrogenase [Bacillus cereus MSX-A12]
gi|226726289|sp|B7HPN3.1|AROE_BACC7 RecName: Full=Shikimate dehydrogenase
gi|254806732|sp|B9IYA1.1|AROE_BACCQ RecName: Full=Shikimate dehydrogenase
gi|206745821|gb|EDZ57218.1| shikimate 5-dehydrogenase [Bacillus cereus H3081.97]
gi|217067575|gb|ACJ81825.1| shikimate 5-dehydrogenase [Bacillus cereus AH187]
gi|221241837|gb|ACM14547.1| shikimate 5-dehydrogenase [Bacillus cereus Q1]
gi|228642350|gb|EEK98639.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|358354868|dbj|BAL20040.1| shikimate 5-dehydrogenase [Bacillus cereus NC7401]
gi|401085831|gb|EJP94065.1| shikimate dehydrogenase [Bacillus cereus IS075]
gi|401095188|gb|EJQ03248.1| shikimate dehydrogenase [Bacillus cereus AND1407]
gi|401203770|gb|EJR10605.1| shikimate dehydrogenase [Bacillus cereus MSX-A12]
Length = 277
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|297568001|ref|YP_003689345.1| shikimate 5-dehydrogenase [Desulfurivibrio alkaliphilus AHT2]
gi|296923916|gb|ADH84726.1| shikimate 5-dehydrogenase [Desulfurivibrio alkaliphilus AHT2]
Length = 270
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 16/163 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T+V+G+I PV HS+ P +HN F N +YVP+ D + + AG
Sbjct: 4 IDGSTEVYGIIGNPVRHSRSPAMHNAAFAACGLNKVYVPLPALDGAAAVAAIRTLGIAGA 63
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE V++ D+V P+A I AVNTI+RR + L G NTD + A+ +A++
Sbjct: 64 SVTIPHKETVIEQLDKVDPVAARIGAVNTIVRRGDE--LHGANTDWLGANQALGEALE-- 119
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
LAG +L GAGG+ RA+ FG + GA+V++
Sbjct: 120 ------------LAGAKVLLLGAGGSARAIGFGLREAGAKVIL 150
>gi|406593670|ref|YP_006740849.1| shikimate 5-dehydrogenase [Chlamydia psittaci NJ1]
gi|405789542|gb|AFS28284.1| shikimate 5-dehydrogenase [Chlamydia psittaci NJ1]
Length = 477
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 175/396 (44%), Gaps = 43/396 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ +
Sbjct: 56 TL-----RKNPSLSEIAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKKHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++++++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVAQGQLSIEDLL-AYNYTNLSSESRIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQINMSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
L + + G+GG+ +A+A GA++ IF+
Sbjct: 327 NILLQNKHVGIVGSGGSAKAIATTFADSGAQISIFN 362
>gi|228916966|ref|ZP_04080527.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228842687|gb|EEM87774.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 277
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|218905471|ref|YP_002453305.1| shikimate 5-dehydrogenase [Bacillus cereus AH820]
gi|228929379|ref|ZP_04092402.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229123873|ref|ZP_04253066.1| Shikimate dehydrogenase [Bacillus cereus 95/8201]
gi|226724114|sp|B7JNW6.1|AROE_BACC0 RecName: Full=Shikimate dehydrogenase
gi|218536842|gb|ACK89240.1| shikimate 5-dehydrogenase [Bacillus cereus AH820]
gi|228659587|gb|EEL15234.1| Shikimate dehydrogenase [Bacillus cereus 95/8201]
gi|228830285|gb|EEM75899.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 277
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|49481393|ref|YP_038388.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196039231|ref|ZP_03106537.1| shikimate dehydrogenase [Bacillus cereus NVH0597-99]
gi|81696659|sp|Q6HDI8.1|AROE_BACHK RecName: Full=Shikimate dehydrogenase
gi|49332949|gb|AAT63595.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196029858|gb|EDX68459.1| shikimate dehydrogenase [Bacillus cereus NVH0597-99]
Length = 277
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|451993921|gb|EMD86393.1| hypothetical protein COCHEDRAFT_1207375 [Cochliobolus heterostrophus
C5]
Length = 1589
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 162/383 (42%), Gaps = 47/383 (12%)
Query: 36 GADVVEIRLDCINN--FQPG--------KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + QPG + L I+ T +PV+ R + GG + +
Sbjct: 1081 GSDAVELRIDLLEDPEGQPGLPTPDFVIEQLTILRTVTSIPVIFTLRTQAQGGKFPDQAY 1140
Query: 86 KRLEALHL---AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
EAL L A LG ++VD EL + ++L Q S G I++ + D +
Sbjct: 1141 D--EALTLYRTALRLGCEFVDLELTMPEHVL--QEISENRGFSEIIASHHDPKGELNWRN 1196
Query: 143 GYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQV----PIIAYSVGERGLVSQ 196
G +S+ +IKLV + + + + S Q P+IA ++GE+G +S+
Sbjct: 1197 GSWISQYNRALQYGTVIKLVGVAKSLEDNFALAEFKSWAQTAHPTPLIAINMGEKGKMSR 1256
Query: 197 LLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPIL 256
+L+ F + + L G + +R+ + TK F + P+ S P L
Sbjct: 1257 ILN-GFMTPVSHPLLPSATAPGQLSAVDIRRGLSLMG-EIPTKQFYIFGSPIAQSPSPRL 1314
Query: 257 HNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316
HN FR IY D+ F +PDF G SV P K+ V+ D V P +
Sbjct: 1315 HNTLFRETGLPHIYSRHETTDVNSFRDIIRTPDFGGASVTIPLKQDVIPLLDGVGPEVEV 1374
Query: 317 IAAVNTIIRRPSDG--------KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ S KLIG NTD + + +A G GS L
Sbjct: 1375 IGAVNTIVPEVSIDETTGKQVTKLIGRNTDYLGMVLILRNA--------GAQGNGSAL-- 1424
Query: 369 RMFVLAGAGGAGRALAFGAKSRG 391
+ G GG RA + K G
Sbjct: 1425 ----VIGGGGTSRAAIYALKEMG 1443
>gi|116204841|ref|XP_001228231.1| hypothetical protein CHGG_10304 [Chaetomium globosum CBS 148.51]
gi|88176432|gb|EAQ83900.1| hypothetical protein CHGG_10304 [Chaetomium globosum CBS 148.51]
Length = 1464
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 32/364 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK-RLEAL 91
G+D VE+R+D + +F P + + ++ + +P++ R GG + D++ L+
Sbjct: 977 GSDAVELRVDLLESFDPEFVARQVSLLRSAAKVPIVYTVRTVSQGGKFPDDDYTLALQLY 1036
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
H+ G +Y+D E+ + ++IL S G I++ + D + S++
Sbjct: 1037 HIGLRTGVEYLDLEMTMPADILDAVAES--KGFTRIIASHHDPQ-----------SKLSW 1083
Query: 152 TGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSL 211
I+ +I ++ ++L+ VPIIA ++G G +S++L+ F + + L
Sbjct: 1084 RNGSWIQFYNKALQYGDIIKLTKMLAAHDVPIIALNMGHAGKLSRMLN-GFMTPVSHPEL 1142
Query: 212 KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV 271
G + +RQ + + + F L KP+ S+ P LHN F Y
Sbjct: 1143 PAKAAPGQLSATEIRQALSLIG-ELEPRSFYLFGKPISSSRSPALHNTLFGAAGLPHSYS 1201
Query: 272 PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK 331
D+ SP F G SV P K +M D + A++I AVNTII PS
Sbjct: 1202 NFETDNASDVQDLIRSPHFGGASVTIPLKLDIMPLLDSISDAARSIGAVNTIIPVPSATG 1261
Query: 332 ----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGA 387
L+G NTD + ++ A G TA+ SP A ++ G+GG RA +
Sbjct: 1262 DKPILLGDNTDWMGMVFSLRSA----GLVQRTAA--SPGAA---MVVGSGGTTRAAIYAL 1312
Query: 388 KSRG 391
S G
Sbjct: 1313 HSLG 1316
>gi|228935655|ref|ZP_04098469.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824015|gb|EEM69833.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 277
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|384182154|ref|YP_005567916.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328238|gb|ADY23498.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 277
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|300118673|ref|ZP_07056401.1| shikimate 5-dehydrogenase [Bacillus cereus SJ1]
gi|298723922|gb|EFI64636.1| shikimate 5-dehydrogenase [Bacillus cereus SJ1]
Length = 277
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGDPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|402555531|ref|YP_006596802.1| shikimate 5-dehydrogenase [Bacillus cereus FRI-35]
gi|401796741|gb|AFQ10600.1| shikimate 5-dehydrogenase [Bacillus cereus FRI-35]
Length = 277
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|407455557|ref|YP_006734448.1| shikimate 5-dehydrogenase [Chlamydia psittaci GR9]
gi|407458292|ref|YP_006736597.1| shikimate 5-dehydrogenase [Chlamydia psittaci WS/RT/E30]
gi|407460913|ref|YP_006738688.1| shikimate 5-dehydrogenase [Chlamydia psittaci WC]
gi|449071371|ref|YP_007438451.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci Mat116]
gi|405782100|gb|AFS20849.1| shikimate 5-dehydrogenase [Chlamydia psittaci GR9]
gi|405784707|gb|AFS23453.1| shikimate 5-dehydrogenase [Chlamydia psittaci WS/RT/E30]
gi|405787510|gb|AFS26254.1| shikimate 5-dehydrogenase [Chlamydia psittaci WC]
gi|449039879|gb|AGE75303.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci Mat116]
Length = 477
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 176/396 (44%), Gaps = 43/396 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ + +
Sbjct: 56 TL-----RKNPSLSEIAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNYLN-IKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKQHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++++++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVAQGQLSIEDLL-AYNYTNLSSESRIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
L + + G+GG+ +A+A GA++ IF+
Sbjct: 327 NILLQNKHVGIVGSGGSAKAIATTFADSGAQISIFN 362
>gi|229175009|ref|ZP_04302528.1| Shikimate dehydrogenase [Bacillus cereus MM3]
gi|423457417|ref|ZP_17434214.1| shikimate dehydrogenase [Bacillus cereus BAG5X2-1]
gi|228608470|gb|EEK65773.1| Shikimate dehydrogenase [Bacillus cereus MM3]
gi|401147801|gb|EJQ55294.1| shikimate dehydrogenase [Bacillus cereus BAG5X2-1]
Length = 277
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|52141171|ref|YP_085659.1| shikimate 5-dehydrogenase [Bacillus cereus E33L]
gi|81686158|sp|Q634K8.1|AROE_BACCZ RecName: Full=Shikimate dehydrogenase
gi|51974640|gb|AAU16190.1| shikimate 5-dehydrogenase [Bacillus cereus E33L]
Length = 277
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|238489101|ref|XP_002375788.1| pentafunctional polypeptide (AroM), putative [Aspergillus flavus
NRRL3357]
gi|317137116|ref|XP_001727508.2| shikimate dehydrogenase [Aspergillus oryzae RIB40]
gi|327507654|sp|B8N4Q9.1|ARO1_ASPFN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|220698176|gb|EED54516.1| pentafunctional polypeptide (AroM), putative [Aspergillus flavus
NRRL3357]
gi|391869672|gb|EIT78867.1| pentafunctional AROM protein [Aspergillus oryzae 3.042]
Length = 1578
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 169/383 (44%), Gaps = 49/383 (12%)
Query: 36 GADVVEIRLDCINNFQPGKDLEI------------ILTKKPLPVLIVYRPKWAGGLYEGD 83
G+D VE+R+D + + P D +I + + LP++ R K GG + D
Sbjct: 1074 GSDAVELRVDLLKD--PASDSDIPSVDYVAEQMAFLRSYVSLPLIFTIRTKSQGGRFPDD 1131
Query: 84 EHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
H +E LA G+++VD E+ +L + + + ++ I S + S ++
Sbjct: 1132 AHDAAMELYRLAFRSGSEFVDLEIAFPDEML-RAVTEMKGYSKIIASHHDPKGELSWANM 1190
Query: 143 GYLVSRMQATG-ADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
++ +A DIIKLV ++ + + + S + P+IA ++G+ G +S++
Sbjct: 1191 SWMKYYNRALEYGDIIKLVGVAKNLDDNTALRKFKSWAEEAHETPLIAINMGDNGQLSRI 1250
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPI 255
L NG + S P P S + K + + K F + PV S+ P+
Sbjct: 1251 L----NGFMTPVSHPSLPFKAAPGQLSATEIRKGLSLMGEIKQKKFAVFGTPVSGSRSPV 1306
Query: 256 LHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312
LHN F Y + V+D+K F SPDF G SV P K +M D + P
Sbjct: 1307 LHNTLFSQAGLPHEYGRLETANVEDVKDFIR---SPDFGGASVTIPLKLDIMPLLDHITP 1363
Query: 313 LAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
A+ I AVNTII +DG +L+G NTD + ++ +A E K+ +A
Sbjct: 1364 EAEIIGAVNTIIPV-ADGDKPARLVGSNTDWQGMTLSLHNAGVETANKDASA-------- 1414
Query: 369 RMFVLAGAGGAGRALAFGAKSRG 391
++ G GG RA + S G
Sbjct: 1415 ---LVIGGGGTARAAIYALHSMG 1434
>gi|115492079|ref|XP_001210667.1| hypothetical protein ATEG_00581 [Aspergillus terreus NIH2624]
gi|121742811|sp|Q0D0F3.1|ARO1_ASPTN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|114197527|gb|EAU39227.1| hypothetical protein ATEG_00581 [Aspergillus terreus NIH2624]
Length = 1581
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 167/379 (44%), Gaps = 41/379 (10%)
Query: 36 GADVVEIRLDCINNFQPGKDLEI------------ILTKKPLPVLIVYRPKWAGGLYEGD 83
G+D VE+R+D + + P D +I + ++ LP++ R K GG + D
Sbjct: 1075 GSDAVELRVDLLKD--PASDSDIPSVDYVAEQMSFLRSRTALPLIFTIRTKSQGGRFPDD 1132
Query: 84 EHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
H ++ LA G+++VD E+ +L + + + ++ I S + S ++
Sbjct: 1133 AHDAAMDLYRLAMRSGSEFVDLEIAFPDEML-RAVTEMKGYSKIIASHHDPKGELSWSNM 1191
Query: 143 GYLVSRMQATG-ADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
++ +A D+IKLV ++ + + + + + VP+IA ++G+ G +S++
Sbjct: 1192 SWIKYYNRALEYGDVIKLVGVAKNLDDNTALRKFKTWAEEAHDVPMIAINMGDNGQLSRI 1251
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPI 255
L NG + S P P S + + + + K F + PV S+ P
Sbjct: 1252 L----NGFMTPVSHPSLPFKAAPGQLSATEIRRGLSLMGEIKKKRFAIFGNPVSVSRSPA 1307
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
LHN F+ Y + + + SPDF G SV P K +M DE+ A+
Sbjct: 1308 LHNTLFQQSGLPHEYTRLETSNAEDVKDFIRSPDFGGASVTIPLKLDIMPLLDEIAREAE 1367
Query: 316 AIAAVNTI--IRRPSDG-KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFV 372
I AVNTI + SD +L+GYNTD + I ++ +A K+ +A V
Sbjct: 1368 IIGAVNTIVPVNNGSDKTRLVGYNTDWQGMILSLRNAGVYGANKDASA-----------V 1416
Query: 373 LAGAGGAGRALAFGAKSRG 391
+ G GG RA F + G
Sbjct: 1417 VVGGGGTARAAIFALHNMG 1435
>gi|452844436|gb|EME46370.1| hypothetical protein DOTSEDRAFT_70392 [Dothistroma septosporum NZE10]
Length = 1621
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 175/405 (43%), Gaps = 50/405 (12%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLE----------IILTKKPLP 66
L + +E+V + + + G+D +E+R D + + + L ++ + LP
Sbjct: 1084 LTSPQIEKVTTILPEVTM-GSDAIELRADLLVDEKSTDGLSSPDFLTEQVSLLRSSSTLP 1142
Query: 67 VLIVYRPKWAGGLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYS-SHQSGT 124
++ R GG + +GD + + +A +G D+VD EL ++ K+Y +H+
Sbjct: 1143 LIFTLRSVSQGGRFPDGDSTRAIALYAVALRMGFDFVDLELTSLPDV--KEYVLNHRKMC 1200
Query: 125 RFIVSCNLDCETPSEEDLGY-LVSRMQATG--ADIIKLVFSV-----NDITEIARIFQLL 176
I S + T S D + A DI+KLV ND + + +
Sbjct: 1201 TIIASHHDPKATLSWADGAKDWIPHFDAAQEYGDIVKLVGVAKTDDDNDDLKTFKKWAAK 1260
Query: 177 SHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKV----E 232
+ P IA ++ E G +S++ NG + S P P S + KV
Sbjct: 1261 EYAHKPFIAMNMAEIGKMSRV----NNGFMTPVSHPALPSKAAPGQLSAAEIRKVLGLVG 1316
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHV---NYNGIYVPMFVDDLKKFFSTYSSPD 289
HI K F + KPV HS+ P LHN F + G++ VDD + SSPD
Sbjct: 1317 HIKP--KKFCIFGKPVQHSRSPALHNTLFDATGLPHAYGLHETDLVDD--EVQKIISSPD 1372
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG---KLIGYNTDCEASITAI 346
F G SV P K +M DEV P A+ I AVNTI+ +DG LIG+NTD + + A+
Sbjct: 1373 FGGASVTIPLKLDIMPLLDEVDPAAKTIGAVNTIVPVENDGGRATLIGHNTDWQGMVLAL 1432
Query: 347 EDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+A ++ G A M V G GG RA + K G
Sbjct: 1433 RNA-------GAHSAPGQRHAAAMVV--GGGGTARAAIYALKEMG 1468
>gi|121938437|sp|Q2UCP6.1|ARO1_ASPOR RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|83770536|dbj|BAE60669.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1595
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 169/383 (44%), Gaps = 49/383 (12%)
Query: 36 GADVVEIRLDCINNFQPGKDLEI------------ILTKKPLPVLIVYRPKWAGGLYEGD 83
G+D VE+R+D + + P D +I + + LP++ R K GG + D
Sbjct: 1074 GSDAVELRVDLLKD--PASDSDIPSVDYVAEQMAFLRSYVSLPLIFTIRTKSQGGRFPDD 1131
Query: 84 EHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
H +E LA G+++VD E+ +L + + + ++ I S + S ++
Sbjct: 1132 AHDAAMELYRLAFRSGSEFVDLEIAFPDEML-RAVTEMKGYSKIIASHHDPKGELSWANM 1190
Query: 143 GYLVSRMQATG-ADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
++ +A DIIKLV ++ + + + S + P+IA ++G+ G +S++
Sbjct: 1191 SWMKYYNRALEYGDIIKLVGVAKNLDDNTALRKFKSWAEEAHETPLIAINMGDNGQLSRI 1250
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPI 255
L NG + S P P S + K + + K F + PV S+ P+
Sbjct: 1251 L----NGFMTPVSHPSLPFKAAPGQLSATEIRKGLSLMGEIKQKKFAVFGTPVSGSRSPV 1306
Query: 256 LHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312
LHN F Y + V+D+K F SPDF G SV P K +M D + P
Sbjct: 1307 LHNTLFSQAGLPHEYGRLETANVEDVKDFIR---SPDFGGASVTIPLKLDIMPLLDHITP 1363
Query: 313 LAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
A+ I AVNTII +DG +L+G NTD + ++ +A E K+ +A
Sbjct: 1364 EAEIIGAVNTIIPV-ADGDKPARLVGSNTDWQGMTLSLHNAGVETANKDASA-------- 1414
Query: 369 RMFVLAGAGGAGRALAFGAKSRG 391
++ G GG RA + S G
Sbjct: 1415 ---LVIGGGGTARAAIYALHSMG 1434
>gi|367055142|ref|XP_003657949.1| hypothetical protein THITE_2124223 [Thielavia terrestris NRRL 8126]
gi|347005215|gb|AEO71613.1| hypothetical protein THITE_2124223 [Thielavia terrestris NRRL 8126]
Length = 1587
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 168/372 (45%), Gaps = 30/372 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
G+D VE+R+D + N+ P + + ++ + +P++ R GG + D++K L+
Sbjct: 1074 GSDAVELRVDLLQNYDPDFVARQVALLRSAAKVPIVYTVRTVSQGGKFPDDDYKLARELY 1133
Query: 93 -LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
+ G +Y+D E+ + + IL + + + TR I S + S ++ ++ +A
Sbjct: 1134 QVGLRTGVEYLDLEMTMPAEIL-EAVTEAKGFTRIIASHHDPQYRLSWKNGSWIPFYNKA 1192
Query: 152 TG-ADIIKLVFSVNDITEIARIF----QLLSHCQVPIIAYSVGERGLVSQLLSPKFNGAL 206
D+IKLV +I + + ++L+ P+IA ++G G +S++L+ F +
Sbjct: 1193 LQYGDVIKLVGVAREIGDNFALTNFKTRMLAAHNKPVIALNMGPAGKLSRVLN-GFMTPV 1251
Query: 207 VYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNY 266
+ +L G + +RQ + + K F L KP+G S+ P LHN F
Sbjct: 1252 SHPALPSKAAPGQLSAAEIRQALALIG-ELEPKSFYLFGKPIGSSRSPALHNTLFGATGL 1310
Query: 267 NGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR- 325
Y D SPDF G SV P K +M D + A+AI AVNTII
Sbjct: 1311 PHQYSRFETDRASDVQDLLRSPDFGGASVTIPLKLDIMPLLDRISDAARAIGAVNTIIPV 1370
Query: 326 RPS-DG---KLIGYNTDCEASITAIEDA--IKERGYKNGTASFGSPLAGRMFVLAGAGGA 379
PS DG L+G NTD + A+ A ++ + G A ++ G+GG
Sbjct: 1371 APSADGAKPALLGDNTDWMGMVFALRSAGLVQRSAARPGAA-----------MVVGSGGT 1419
Query: 380 GRALAFGAKSRG 391
RA + S G
Sbjct: 1420 TRAAIYALHSLG 1431
>gi|212547102|ref|XP_002153704.1| pentafunctional polypeptide (AroM), putative [Talaromyces marneffei
ATCC 18224]
gi|327507643|sp|B6QWH9.1|ARO11_PENMQ RecName: Full=Pentafunctional AROM polypeptide 1; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|210064464|gb|EEA18560.1| pentafunctional polypeptide (AroM), putative [Talaromyces marneffei
ATCC 18224]
Length = 1573
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 167/396 (42%), Gaps = 50/396 (12%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQPG----------KDLEIILTKKPLPVLIVYRPKWAG 77
++ + A G+D VE+R+D + + G + + ++ LP++ R G
Sbjct: 1062 DLLRTVASGSDAVELRVDLLKDPSSGNGIPSAEYVAEQISFYRSRVSLPIVFTIRTVSQG 1121
Query: 78 GLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
G + D H LE + LA G +++D E+ ++L K S I++ + D +
Sbjct: 1122 GKFPNDAHDAALELIMLAIRSGCEFIDLEITFPEDLLRKVAESKAHAK--IIASHHDPQG 1179
Query: 137 PSEEDLGYLVSRMQAT--GADIIKLV---FSVNDITEIARI--FQLLSHCQVPIIAYSVG 189
G + DIIKLV ++ D T + + +H VP+IA ++G
Sbjct: 1180 KLNWANGSWIQYYNKALQYGDIIKLVGVAETLKDNTALREFKDWAEQAHPDVPVIAINMG 1239
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKP 247
++G +S++L NG L S P P S + K I + K F + KP
Sbjct: 1240 DKGQLSRML----NGFLTPVSHPALPFKAAPGQLSAAEIRKGLSIMGEIPAKKFAIFGKP 1295
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVD---DLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
V S+ P +HN F +Y + D D+K+F SPDF G S P K ++
Sbjct: 1296 VSVSRSPAMHNTLFEQNGLPYVYTRLETDQAQDVKEFIR---SPDFGGASATIPLKLDII 1352
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGK-----LIGYNTDCEASITAIEDAIKERGYKNGT 359
DEV A+ I AVNTII P +GK LIG NTD + + +A +
Sbjct: 1353 PLIDEVLNEAEIIGAVNTII--PVEGKDGSTRLIGRNTDWSGIVRCLREAGAHSNEGESS 1410
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
A ++ G GG RA + + G V
Sbjct: 1411 A-----------LVIGGGGTARAAIYALHNMGFSTV 1435
>gi|423400819|ref|ZP_17377992.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-2]
gi|423478476|ref|ZP_17455191.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-1]
gi|401653809|gb|EJS71352.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-2]
gi|402428638|gb|EJV60735.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-1]
Length = 277
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ +DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKKIGAVNTVVH--NDGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|302900452|ref|XP_003048265.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|327507663|sp|C7YZ74.1|ARO1_NECH7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|256729198|gb|EEU42552.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1569
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 169/375 (45%), Gaps = 35/375 (9%)
Query: 36 GADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEAL 91
G+D VE+R+D + + + + I+ P++ R GG + + ++ LE
Sbjct: 1072 GSDAVELRVDLLQDRSVDSVTRQVSILRALAKKPIVFTLRTVSQGGKFPDEAYEEGLELY 1131
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE-TPSEEDLGYLVSRMQ 150
LA +G +YVD E+ + NI+ Q + G I++ + D + T S ++ ++ +
Sbjct: 1132 RLALRMGMEYVDVEMTLPENII--QTVTESRGHSRIIASHHDPQGTMSWKNASWIPFYNR 1189
Query: 151 ATG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPKFNGA 205
A DIIKLV S D ++A+ + Q P+IA ++G+ G +S++L+ KF
Sbjct: 1190 ALQFGDIIKLVGVARSSEDNFDLAKFKSRMQEAQKTPMIAMNMGKAGKLSRVLN-KFLTP 1248
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ + +L G + +R+ + + D F L KP+ S+ P LHN F
Sbjct: 1249 VSHPALPFKAAPGQMSAAEIRRGLALLG-DLDPCNFYLFGKPISASRSPALHNTLFGQTG 1307
Query: 266 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII- 324
Y + D+++ +PDF G SV P K VM DE+ A+ I AVNT++
Sbjct: 1308 LPHQYHRLETDNIQDVREVLQAPDFGGASVTIPLKLDVMGQVDELSEAARTIGAVNTVVP 1367
Query: 325 --------RRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGA 376
RR +L+G NTD + A+ D E + T ++ G+
Sbjct: 1368 IGKADASDRR----RLLGDNTDWRGMVHALRDEGVEEQADSETKGAA--------MVVGS 1415
Query: 377 GGAGRALAFGAKSRG 391
GG RA F S G
Sbjct: 1416 GGTTRAAIFALHSLG 1430
>gi|301055826|ref|YP_003794037.1| shikimate 5-dehydrogenase [Bacillus cereus biovar anthracis str.
CI]
gi|423549924|ref|ZP_17526251.1| shikimate dehydrogenase [Bacillus cereus ISP3191]
gi|300377995|gb|ADK06899.1| shikimate 5-dehydrogenase [Bacillus cereus biovar anthracis str.
CI]
gi|401189540|gb|EJQ96590.1| shikimate dehydrogenase [Bacillus cereus ISP3191]
Length = 277
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLREKRILLLGAGGASRAIYFSLVDAGVK 145
>gi|229093404|ref|ZP_04224509.1| Shikimate dehydrogenase [Bacillus cereus Rock3-42]
gi|228689998|gb|EEL43801.1| Shikimate dehydrogenase [Bacillus cereus Rock3-42]
Length = 277
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMGAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|46116890|ref|XP_384463.1| hypothetical protein FG04287.1 [Gibberella zeae PH-1]
Length = 1568
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 177/390 (45%), Gaps = 29/390 (7%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRP 73
L V+Q + N+ G+D VE+R+D + + + + + P++ R
Sbjct: 1054 LTVPDVDQAV-NLLPEVVVGSDAVELRVDLLQDRSIDSVIRQVSTLRASAKKPIVFTLRT 1112
Query: 74 KWAGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
+ GG + + LE LA +G +Y+D E+ + ++ K + + +R I S +
Sbjct: 1113 ESQGGKFPDSAYDEGLELYRLAVRMGMEYIDVEMTLPDEMI-KTVTESRGYSRIIASHHD 1171
Query: 133 DCETPSEEDLGYLVSRMQATG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYS 187
T S ++ ++ +A DIIKLV + D ++AR + Q P+I+ +
Sbjct: 1172 PKGTMSWKNASWIQYYNRALQYGDIIKLVGIARTPEDNFDLARFKSRMQEAQKTPMISMN 1231
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
+G+ G +S++L+ +F + + +L G + +RQ + + + F L KP
Sbjct: 1232 MGKAGKLSRVLN-RFLTPVSHPALPFKAAPGQMSAAEIRQALALLG-DLEPHNFYLFGKP 1289
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
+ S+ P LHN F+ Y + D+++ SPDF G SV P K +M
Sbjct: 1290 ISASRSPALHNTLFKQTGLPHQYHRLETDNIEDVRDVLKSPDFGGASVTIPLKLDIMGKL 1349
Query: 308 DEVHPLAQAIAAVNTIIR--RPSDG---KLIGYNTDCEASITAIEDA-IKERGYKNGTAS 361
DE+ A+ I AVNT++ +P D +L+G NTD + A+ A I+ + N A+
Sbjct: 1350 DELSDAARTIGAVNTVVPFGKPDDNGCRRLLGDNTDWRGMVHALRHAGIQGQDTDNKGAA 1409
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ G+GG RA F S G
Sbjct: 1410 ----------MVVGSGGTTRAAIFALHSLG 1429
>gi|301057600|ref|ZP_07198680.1| 3-dehydroquinate dehydratase, type I [delta proteobacterium NaphS2]
gi|300448324|gb|EFK12009.1| 3-dehydroquinate dehydratase, type I [delta proteobacterium NaphS2]
Length = 222
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 9/204 (4%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC LMAQ E+ L M A + D++E+RLD + +F DLE I++ P+LI Y
Sbjct: 1 MICIALMAQDTEEALKKMTVA-SPNCDLMEVRLDVMKSF----DLEKIISSAQKPLLITY 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R K GG + ++ R++ L A LGADY+D E + + + + +R ++S +
Sbjct: 56 RSKKEGGKGDIPDNARVDYLLEAVRLGADYIDVEYAMPLEHRDRLFEG-RGKSRLVLSKH 114
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSV 188
TPSEE L +L+ +M ATGA ++K+V + + +L+ + V +A+ +
Sbjct: 115 FMDGTPSEETLSHLLKKMTATGAHVVKIVTQARTTLDNLSVLRLIPESEALGVKAVAFCM 174
Query: 189 GERGLVSQLLSPKFNGALVYGSLK 212
G G +S++ P GA + + +
Sbjct: 175 GPLGRISRVACPLLGGAFTFAAFR 198
>gi|171690198|ref|XP_001910024.1| hypothetical protein [Podospora anserina S mat+]
gi|327507669|sp|B2B223.1|ARO1_PODAN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|170945047|emb|CAP71158.1| unnamed protein product [Podospora anserina S mat+]
Length = 1567
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 164/374 (43%), Gaps = 35/374 (9%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEAL 91
G+D VE+R+D + + P + ++ + +P++ R GG + D++KR LE
Sbjct: 1069 GSDAVELRVDLLESLNPEFVATQVALLRSAAKIPIVYTIRTISQGGKFPDDDYKRALELY 1128
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP-SEEDLGYLVSRMQ 150
+ G +Y+D E+ + ++L Q + G I++ + D E S ++ G++ +
Sbjct: 1129 QIGLRTGVEYLDLEMTMPEDVL--QTVTETKGFTHIIASHHDPENKLSWKNGGWIPFYNK 1186
Query: 151 ATG-ADIIKLVFSVNDITEIARI----FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
A D+IKLV ++++ + ++L + PIIA ++G G +S++L NG
Sbjct: 1187 ALQYGDVIKLVGMAREVSDNFDLTNFKMRMLEAHKKPIIALNMGTAGKLSRVL----NGF 1242
Query: 206 LVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFR 262
L S P P + +RQ + + K F L KP+ S+ P LHN F
Sbjct: 1243 LTPVSHPALPSKAAPGQLSAAEIRQALSLVG-ELEPKSFYLFGKPISSSRSPALHNGLFA 1301
Query: 263 HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
Y D S DF G SV P K ++ DEV A AI AVNT
Sbjct: 1302 QTGLPHQYSLFETDVAADVKDIIRSADFGGASVTIPLKLDIIPLLDEVSDAATAIGAVNT 1361
Query: 323 IIRRPSDGK----LIGYNTDCEASITAIEDA-IKERGYKNGTASFGSPLAGRMFVLAGAG 377
+I +G L G NTD + ++ A I R N P AG ++ G+G
Sbjct: 1362 VIPVSPEGSDKTILRGDNTDWMGMVFSLRQAGIAPRTKTN-------PGAG---MVVGSG 1411
Query: 378 GAGRALAFGAKSRG 391
G RA + G
Sbjct: 1412 GTTRAAVYALHDLG 1425
>gi|238054389|sp|P07547.3|ARO1_EMENI RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
Length = 1583
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 153/336 (45%), Gaps = 27/336 (8%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + NN P D L + ++ LP++ R + GG + + H
Sbjct: 1074 GSDAVELRVDLLKDPASNNDIPSVDYVVEQLSFLRSRVTLPIIFTIRTQSQGGRFPDNAH 1133
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
LE LA G ++VD E+ ++L + + + ++ I S + S ++ +
Sbjct: 1134 DAALELYRLAFRSGCEFVDLEIAFPEDML-RAVTEMKGFSKIIASHHDPKGELSWANMSW 1192
Query: 145 LVSRMQATG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLS 199
+ +A DIIKLV +++D T + + + VP+IA ++G++G +S++L
Sbjct: 1193 IKFYNKALEYGDIIKLVGVARNIDDNTALRKFKNWAAEAHDVPLIAINMGDQGQLSRIL- 1251
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTK--VFGLISKPVGHSKGPILH 257
NG + S P P S + K + + K F + P+ S+ P LH
Sbjct: 1252 ---NGFMTPVSHPSLPFKAAPGQLSATEIRKGLSLMGEIKPKKFAIFGSPISQSRSPALH 1308
Query: 258 NPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317
N F V Y + + + SPDF G SV P K +M DEV A+ I
Sbjct: 1309 NTLFAQVGLPHNYTRLETTNAQDVQEFIRSPDFGGASVTIPLKLDIMPLLDEVAAEAEII 1368
Query: 318 AAVNTIIR----RPSDGKLIGYNTDCEASITAIEDA 349
AVNTII + + +L+G NTD + I ++ A
Sbjct: 1369 GAVNTIIPVSTGKNTPSRLVGRNTDWQGMILSLRKA 1404
>gi|42783461|ref|NP_980708.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 10987]
gi|81699667|sp|Q730K1.1|AROE_BACC1 RecName: Full=Shikimate dehydrogenase
gi|42739390|gb|AAS43316.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 10987]
Length = 277
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ +I +
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-SISSK--- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|326203602|ref|ZP_08193466.1| shikimate 5-dehydrogenase [Clostridium papyrosolvens DSM 2782]
gi|325986422|gb|EGD47254.1| shikimate 5-dehydrogenase [Clostridium papyrosolvens DSM 2782]
Length = 294
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 288
VE +N T+++G++ P+ H+K P +HN F+ NG+Y+P+ V+ L++ +
Sbjct: 4 VEFVNGKTQLYGVLGNPIEHTKSPFIHNTLFKKFGVNGVYLPVLVETGKLEQVMNGLKGI 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+F GF+V PYK+ V+ + DEV + A+NT+ + +G+ IG NTD E + D
Sbjct: 64 NFLGFNVTVPYKKDVINYLDEVSAEGMLMGAINTV--KKQNGRFIGSNTDAEGFVRDFCD 121
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALA 384
FG+ G+ +L GAGG RA+A
Sbjct: 122 G------------FGTTFKGKRVMLLGAGGTSRAIA 145
>gi|358380070|gb|EHK17749.1| hypothetical protein TRIVIDRAFT_43497 [Trichoderma virens Gv29-8]
Length = 1569
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 168/375 (44%), Gaps = 42/375 (11%)
Query: 38 DVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH-L 93
D VE+R+D + + QP K + ++ P++ R + GG + D + AL+ L
Sbjct: 1075 DAVELRVDLLQDQQPQAVMKQVSLLRHVTGKPIIFTVRSESQGGKFPDDNNDLRRALYRL 1134
Query: 94 AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATG 153
A +G +Y+D E+ ++ I+ ++ + T I S + S ++ ++ + +A
Sbjct: 1135 ALRMGVEYIDLEVTLSDEII-QEVRDSRGHTVIITSHHDPAGALSWKNASWVSAYNRALQ 1193
Query: 154 -ADIIKLV---FSVNDITEIARI-FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVY 208
D+IKLV +V D ++ R ++L+ PIIA ++G G +S++L NG L
Sbjct: 1194 YGDVIKLVGTARTVEDNFDLIRFKSRMLAAQPTPIIALNMGSAGKLSRVL----NGFLTP 1249
Query: 209 GSLKGTPVLGLP---TVESLRQTY----KVEHINADTKVFGLISKPVGHSKGPILHNPTF 261
S P P + +RQ ++E N F L KP+ S+ P LHN F
Sbjct: 1250 VSHPALPFKAAPGQLSAAEIRQGLALLGEIEPQN-----FYLFGKPISKSRSPALHNALF 1304
Query: 262 RHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVN 321
V Y + D ++ S DF G SV P K+ +M D++ + I AVN
Sbjct: 1305 GQVGLPHEYQRLETDKVEDVLEVLRSADFGGASVTIPLKQDIMPHLDDLTDAVKIIGAVN 1364
Query: 322 TII---RRPSDG--KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGA 376
T++ +DG +L G NTD + + + A + N +A+ + GA
Sbjct: 1365 TVVPTTDNSADGRKRLTGDNTDWKGMVYVLRKAGVKAQDGNASAA-----------VIGA 1413
Query: 377 GGAGRALAFGAKSRG 391
GG RA F S G
Sbjct: 1414 GGTSRAAIFALHSLG 1428
>gi|118479500|ref|YP_896651.1| shikimate 5-dehydrogenase [Bacillus thuringiensis str. Al Hakam]
gi|196044711|ref|ZP_03111945.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB108]
gi|229186574|ref|ZP_04313735.1| Shikimate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|376268232|ref|YP_005120944.1| shikimate 5-dehydrogenase [Bacillus cereus F837/76]
gi|166219218|sp|A0RIV1.1|AROE_BACAH RecName: Full=Shikimate dehydrogenase
gi|118418725|gb|ABK87144.1| shikimate dehydrogenase [Bacillus thuringiensis str. Al Hakam]
gi|196024199|gb|EDX62872.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB108]
gi|228596833|gb|EEK54492.1| Shikimate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|364514032|gb|AEW57431.1| Shikimate 5-dehydrogenase I alpha [Bacillus cereus F837/76]
Length = 277
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + +GKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|423582542|ref|ZP_17558653.1| shikimate dehydrogenase [Bacillus cereus VD014]
gi|401213421|gb|EJR20162.1| shikimate dehydrogenase [Bacillus cereus VD014]
Length = 277
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V ++L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEELGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + GKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--GGKLIGYNTDGIGFVRALQSVSSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|228923087|ref|ZP_04086379.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423634842|ref|ZP_17610495.1| shikimate dehydrogenase [Bacillus cereus VD156]
gi|228836585|gb|EEM81934.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401278828|gb|EJR84758.1| shikimate dehydrogenase [Bacillus cereus VD156]
Length = 277
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V ++L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEELGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + GKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--GGKLIGYNTDGIGFVRALQSVSSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|229031985|ref|ZP_04187970.1| Shikimate dehydrogenase [Bacillus cereus AH1271]
gi|228729340|gb|EEL80332.1| Shikimate dehydrogenase [Bacillus cereus AH1271]
Length = 277
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + D++ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDKIDPLAKKIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK 145
>gi|165873244|ref|ZP_02217854.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0488]
gi|227817111|ref|YP_002817120.1| shikimate 5-dehydrogenase [Bacillus anthracis str. CDC 684]
gi|254750915|ref|ZP_05202954.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Vollum]
gi|254806730|sp|C3L5T8.1|AROE_BACAC RecName: Full=Shikimate dehydrogenase
gi|164711003|gb|EDR16570.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0488]
gi|227006413|gb|ACP16156.1| shikimate dehydrogenase [Bacillus anthracis str. CDC 684]
Length = 277
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 RLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|212531983|ref|XP_002146148.1| 3-dehydroquinate synthase, putative [Talaromyces marneffei ATCC
18224]
gi|327507645|sp|B6QCA7.1|ARO12_PENMQ RecName: Full=Pentafunctional AROM polypeptide 2; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|210071512|gb|EEA25601.1| 3-dehydroquinate synthase, putative [Talaromyces marneffei ATCC
18224]
Length = 1571
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 163/355 (45%), Gaps = 49/355 (13%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQPGKD------------LEIILTKKPLPVLIVYRPKW 75
++ + A G+D VE+R+D + + P D + ++ LP++ R
Sbjct: 1062 DLLRTVASGSDAVELRVDLLKD--PSSDSVIPSAEYVAEQISFYRSRVSLPIVFTIRTVS 1119
Query: 76 AGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN--- 131
GG + D H LE + LA G +++D E+ ++L ++ + ++ + I S +
Sbjct: 1120 QGGKFPDDAHDAALELIMLAIRSGCEFIDLEITFPEDLL-RKVTESKAHAKIIASHHDPR 1178
Query: 132 --LDCETPSEEDLGYLVSRMQATGADIIKLV---FSVNDITEIA--RIFQLLSHCQVPII 184
L+ S + Y +Q DIIKLV ++ D T + + + +H VP+I
Sbjct: 1179 GKLNWANGSW--IQYYNKALQY--GDIIKLVGVAETLKDNTSLKDFKDWAEQAHPDVPVI 1234
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFG 242
A ++G++G +S++L NG L S P P S + + I + K F
Sbjct: 1235 AINMGDKGQLSRML----NGFLTPVSHPALPFKAAPGQLSAAEIRRGLSIMGEIPAKKFA 1290
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD---DLKKFFSTYSSPDFAGFSVGFPY 299
++ KPV S+ P +HN F +Y + D D+K+F SPDF G SV P
Sbjct: 1291 VLGKPVSASRSPPMHNTLFEQNGLPHVYTRLETDKAQDVKEFIR---SPDFGGASVTIPL 1347
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK-----LIGYNTDCEASITAIEDA 349
K ++ DE+ A+ I AVNTII P +GK L+G NTD + + +A
Sbjct: 1348 KLDIIPLIDEILNEAEIIGAVNTII--PVEGKDGSTRLVGRNTDWSGIVRCLREA 1400
>gi|49187228|ref|YP_030480.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Sterne]
gi|167634541|ref|ZP_02392861.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0442]
gi|167638665|ref|ZP_02396941.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0193]
gi|170687435|ref|ZP_02878652.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0465]
gi|177653290|ref|ZP_02935542.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0174]
gi|190566996|ref|ZP_03019912.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034558|ref|ZP_03101967.1| shikimate 5-dehydrogenase [Bacillus cereus W]
gi|228948048|ref|ZP_04110333.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|254684091|ref|ZP_05147951.1| shikimate 5-dehydrogenase [Bacillus anthracis str. CNEVA-9066]
gi|254721925|ref|ZP_05183714.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A1055]
gi|254736439|ref|ZP_05194145.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Western North
America USA6153]
gi|254741476|ref|ZP_05199163.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Kruger B]
gi|254757757|ref|ZP_05209784.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Australia 94]
gi|421506588|ref|ZP_15953511.1| shikimate 5-dehydrogenase [Bacillus anthracis str. UR-1]
gi|421638409|ref|ZP_16079005.1| shikimate 5-dehydrogenase [Bacillus anthracis str. BF1]
gi|49181155|gb|AAT56531.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Sterne]
gi|167513513|gb|EDR88883.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0193]
gi|167529993|gb|EDR92728.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0442]
gi|170668630|gb|EDT19376.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0465]
gi|172081572|gb|EDT66644.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0174]
gi|190561987|gb|EDV15956.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Tsiankovskii-I]
gi|195993100|gb|EDX57059.1| shikimate 5-dehydrogenase [Bacillus cereus W]
gi|228811634|gb|EEM57970.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|401823581|gb|EJT22728.1| shikimate 5-dehydrogenase [Bacillus anthracis str. UR-1]
gi|403394835|gb|EJY92075.1| shikimate 5-dehydrogenase [Bacillus anthracis str. BF1]
Length = 277
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|224130898|ref|XP_002328403.1| predicted protein [Populus trichocarpa]
gi|222838118|gb|EEE76483.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 29 MYQAKAEGADVVEIRLDCINNFQP--GKD-LEIIL-------------TKKPLPVLI--- 69
M AK GADVV DC+ NF P GKD +E L K LI
Sbjct: 5 MRNAKKIGADVV----DCLTNFNPHQGKDQVEQYLLLSLWHLFGFCSTNVKSFSQLISVF 60
Query: 70 ----VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
+ RP W G YEGDE KR EAL LA L A+Y+D EL++ +
Sbjct: 61 VKSVLSRPIWEGSQYEGDETKRREALRLAMQLRANYIDVELEIVHEFNDSMDGKKPDKFK 120
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + TP+ E + LV+R+QATGAD++K+ + DI + + F + +
Sbjct: 121 VIVSSHNFHNTPTPETIADLVARIQATGADMVKISTAALDIKDYGKHFS--GYGTFSRVV 178
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTY 229
+ GERGL+S LLS KF L +G+L+ + G T E L + +
Sbjct: 179 W--GERGLISWLLSRKFGSYLTHGALEAGAISAPGQSTAEDLGRCF 222
>gi|257457569|ref|ZP_05622736.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema vincentii ATCC 35580]
gi|257444955|gb|EEV20031.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema vincentii ATCC 35580]
Length = 496
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 165/374 (44%), Gaps = 34/374 (9%)
Query: 38 DVVEIRLDCINNFQPGKDLEIILTKK--PLPVLIVYRPKWAGGLYEGDEHKRL----EAL 91
D+VE+R D ++ P + L I K +PV++ R GG ++G E R+ L
Sbjct: 29 DIVELRADFLD---PQELLHIRTFPKIAHIPVILTVRRFLDGGQFKGGEGSRITLFARGL 85
Query: 92 HLAEDLGAD---YVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSR 148
A+ D Y+D E V + L + + G I+ +TP + D+ +
Sbjct: 86 AFADTDPLDNFAYLDLESDVQAPSLEEAAQAFNIG---IIRSIHSIKTPIK-DIAAKIRE 141
Query: 149 MQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVY 208
++ T +I+K+ + +++ E+ +F+ ++G+ G+ S++L+PK + + VY
Sbjct: 142 IRRTDEEIVKIAYKADNLAEVTALFKQAQQLNGQNTLIAMGKYGIPSRILAPKLHSSFVY 201
Query: 209 GSLKGTPVLGLPTVE-----SLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRH 263
+ E +L + Y+ IN T ++G+ S P +HN F
Sbjct: 202 TMPREYIAKYHLEQEYIDPITLTELYRFRAINDQTGIYGVAGADTTKSLSPAIHNRGFEK 261
Query: 264 VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 323
N +Y+P+ ++++ AG S+ P+K V+ F D + P++ A AVNT+
Sbjct: 262 KELNAVYIPISGTNIQEVIEFAKCTGIAGLSITHPFKFDVIPFLDSLGPVSTACGAVNTV 321
Query: 324 IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ + GK G NTD + I A+++ + R L + + G GGA A+
Sbjct: 322 LF--NGGKRQGLNTDIDGFIRALQEFLHVRN-----------LRFKHVAIIGTGGAAHAI 368
Query: 384 AFGAKSRGARVVIF 397
A + +F
Sbjct: 369 ANAVHQLHGKACVF 382
>gi|386738224|ref|YP_006211405.1| shikimate dehydrogenase [Bacillus anthracis str. H9401]
gi|384388076|gb|AFH85737.1| Shikimate dehydrogenase [Bacillus anthracis str. H9401]
Length = 277
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|403216777|emb|CCK71273.1| hypothetical protein KNAG_0G02160 [Kazachstania naganishii CBS 8797]
Length = 1588
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 179/396 (45%), Gaps = 40/396 (10%)
Query: 7 TKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP-- 64
TK + +C L + + + S + + A G D VE+R+D + + T +
Sbjct: 1073 TKRSAFVC--LTFEDLTEHTSKLSEI-AYGCDAVEVRVDHLVKLDADFVNRQLFTLRSAT 1129
Query: 65 --LPVLIVYRPKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYS--S 119
LP++ R K GG ++ D+++ LE L LA G +++D EL + + I QY +
Sbjct: 1130 GGLPIIFTVRTKKQGGKFDDDDYETLEQLFSLALKAGVEFIDLELTLPTAI---QYKVLN 1186
Query: 120 HQSGTRFIVSC-NLDCETP-SEEDLGYLVSRMQATGADIIKLV---FSVNDITEIARIFQ 174
++ T+ I S + D P S + ++ + DI+K V + D E+ R
Sbjct: 1187 NKGNTKVIGSHHDFDAAFPWSNSEWENRYNQALSLDVDIVKFVGTAVTFEDNLELERF-- 1244
Query: 175 LLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI 234
SH P+IA ++GE G VS++L+ + L G+ G T+ + + Y
Sbjct: 1245 RFSHTIKPLIAINMGEIGKVSRVLNTILT-PITSSLLPGSAAPGQLTLPEINKIYTSMGG 1303
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY--SSPDFAG 292
++F ++ KP+ HS+ P LHN ++ + + D ++ + + G
Sbjct: 1304 ITPKELF-VVGKPIEHSRSPTLHNTGYKLLGLPHTFGKFETDSAEEVKKQLLDGNKNLGG 1362
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
+V P K ++K+ D++ P A+ I AVNT+I DGK G NTD
Sbjct: 1363 LAVTIPLKLDIIKYMDDLTPAAEIIGAVNTVIPL-GDGKFRGDNTDW------------- 1408
Query: 353 RGYKNGTASFGSP--LAGRMFVLAGAGGAGRALAFG 386
G N S G P ++G ++ GAGGA RA +
Sbjct: 1409 LGITNSLISNGVPANVSGMCGLVVGAGGASRAAVYA 1444
>gi|342887283|gb|EGU86824.1| hypothetical protein FOXB_02651 [Fusarium oxysporum Fo5176]
Length = 1569
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 170/370 (45%), Gaps = 25/370 (6%)
Query: 36 GADVVEIRLDCINNFQ---PGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEAL 91
G+D VE+R+D + + + + + P++ R + GG + ++ L+
Sbjct: 1072 GSDAVELRVDLLQDRSIDSVTRQISTLRASAKKPIVFTLRTESQGGKFPDSAYEEGLQLY 1131
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
LA +G +YVD E+ + +I+ + + + +R I S + T S ++ ++ +A
Sbjct: 1132 RLALQMGLEYVDVEMTLPDDII-QSITESRGYSRIIASHHDPKGTMSWKNASWIQYYNRA 1190
Query: 152 TG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPKFNGAL 206
D+IKLV + D ++A+ + Q P+I ++G+ G +S++L+ +F +
Sbjct: 1191 LQYGDVIKLVGIARTAEDNFDLAKFKARMQEAQKTPMIVMNMGKAGKLSRVLN-RFLTPV 1249
Query: 207 VYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNY 266
+ +L G + +R+ + + D F L KP+ S+ P LHN F +
Sbjct: 1250 SHPALPFKAAPGQMSAAEIRRALALLG-DLDPYNFYLFGKPISASRSPALHNTLFEQMGL 1308
Query: 267 NGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII-- 324
Y + D ++ S DF G SV P K +M DE+ A+AI AVNT++
Sbjct: 1309 PHQYHRLETDKIEDVREVLRSSDFGGASVTIPLKLDIMSQVDELSDAARAIGAVNTVVPL 1368
Query: 325 -RRPSDG--KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGR 381
+ ++G +L+G NTD + A++DA E + T ++ G+GG R
Sbjct: 1369 GKADTNGHRRLLGDNTDWRGMVHALQDASIEEQADSDTRGAA--------MVVGSGGTTR 1420
Query: 382 ALAFGAKSRG 391
A F S G
Sbjct: 1421 AAVFALHSLG 1430
>gi|319411943|emb|CBQ73986.1| probable ARO1-Pentafunctional AROM polypeptide [Sporisorium reilianum
SRZ2]
Length = 1715
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 180/404 (44%), Gaps = 55/404 (13%)
Query: 29 MYQAKAEGADVVEIRLDCIN-NFQP------------GKDLEIILTKKPLPVLIVYRPKW 75
+ ++ GAD +E R D +N + QP L + + LP++ R
Sbjct: 1178 LIRSMETGADALEFRADLLNPSGQPVTAPQVPPTEYVKNQLAALRHRTSLPIVFTVRTHS 1237
Query: 76 AGGLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN--- 131
GG++ +G + + + + +A G +Y+D EL +L + + ++ I S +
Sbjct: 1238 QGGMFPDGAQQEYFDLISMALRHGCEYIDLELGWDDALLAAVVEA-KGNSQIIASWHDWS 1296
Query: 132 --LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITE---IARIFQLLSHCQV-PIIA 185
LD E+ + + R DI K++ N + + + R +S P++A
Sbjct: 1297 GRLDWESEATAKIYTKACRF----GDIAKIIGKANTMEDNYSLERFRAKVSATATKPLLA 1352
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGL 243
++G G S++++P F + + PV P S RQ + A+ + F L
Sbjct: 1353 VNMGAVGQYSRIVNPVFTPI----THELMPVKAAPGQLSFRQVQTALSLIGQAEPRRFAL 1408
Query: 244 ISKPVGHSKGPILHNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
I P+ HS P+LHN F + NY ++ VD+ F SPDF G SV P+
Sbjct: 1409 IGSPISHSLSPLLHNTGFATLGLPHNYE-LFETAEVDEAVAAF--VRSPDFGGASVTIPH 1465
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIR-RPSDGK---LIGYNTDCEASITAIEDAIKERGY 355
K +++ D+V A+AI AVNT+I R ++GK L+G NTD A T ++K
Sbjct: 1466 KLNIIRLLDQVTDEAKAIGAVNTVIPVRNAEGKVTALVGDNTDWIAIETLARRSLK---- 1521
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD 398
T P + + GAGG+ RA F G R+++F+
Sbjct: 1522 ---TVHLADPNLTALVI--GAGGSARAALFALYRLGVKRILLFN 1560
>gi|242774437|ref|XP_002478440.1| pentafunctional polypeptide (AroM), putative [Talaromyces stipitatus
ATCC 10500]
gi|327507673|sp|B8M0U4.1|ARO1_TALSN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|218722059|gb|EED21477.1| pentafunctional polypeptide (AroM), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1577
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 147/348 (42%), Gaps = 36/348 (10%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQPGKD------------LEIILTKKPLPVLIVYRPKW 75
++ + A G+D VE+R+D + + P D + +K LP++ R
Sbjct: 1067 DLLRTVASGSDAVELRVDLLKD--PSSDSAIPSAEYVAEQISFYRSKVALPIVFTVRTVS 1124
Query: 76 AGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDC 134
GG + D H LE + LA G +++D E+ +L K S I++ + D
Sbjct: 1125 QGGKFPDDAHDAALELITLAIRSGCEFIDLEITFPEELLRKVTESKAHAK--IIASHHDP 1182
Query: 135 ETPSEEDLGYLVSRMQAT--GADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSV 188
+ G + DIIKLV S+ D T + VP+IA ++
Sbjct: 1183 QGKLNWANGSWIQYYNKALQYGDIIKLVGVAESLKDNTALKEFKDWAEQAHDVPVIAINM 1242
Query: 189 GERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISK 246
G++G +S++L NG L S P P S + K I + K F + K
Sbjct: 1243 GDKGQLSRML----NGFLTPVSHPALPFKAAPGQLSAAEIRKGLSIMGEIPAKKFAIFGK 1298
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
P+ S+ P +HN F +Y + D + SPDF G SV P K ++
Sbjct: 1299 PILASRSPAMHNTLFEQNGLPHVYTRLETDQTQDVKEFIRSPDFGGASVTIPLKLDIIPL 1358
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGK-----LIGYNTDCEASITAIEDA 349
DEV A+ I AVNTII P +GK LIG NTD + + +A
Sbjct: 1359 IDEVLNEAEIIGAVNTII--PVEGKDGTTRLIGRNTDWSGIVRCLREA 1404
>gi|30264406|ref|NP_846783.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Ames]
gi|47529857|ref|YP_021206.1| shikimate 5-dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
gi|65321706|ref|ZP_00394665.1| COG0169: Shikimate 5-dehydrogenase [Bacillus anthracis str. A2012]
gi|170707392|ref|ZP_02897846.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0389]
gi|229603912|ref|YP_002868624.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0248]
gi|30259064|gb|AAP28269.1| shikimate dehydrogenase [Bacillus anthracis str. Ames]
gi|47505005|gb|AAT33681.1| shikimate 5-dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
gi|170127636|gb|EDS96509.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0389]
gi|229268320|gb|ACQ49957.1| shikimate dehydrogenase [Bacillus anthracis str. A0248]
Length = 308
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEI 147
>gi|340514021|gb|EGR44292.1| pentafunctional aromatic polypeptide [Trichoderma reesei QM6a]
Length = 1575
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 168/372 (45%), Gaps = 36/372 (9%)
Query: 38 DVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLY-EGDEHKRLEALHL 93
D VE+R+D + + QP K + ++ P++ R + GG + +G+ RL L
Sbjct: 1078 DAVELRVDLLKDQQPQAVMKQVSLLRHVTGKPIIFTVRSESQGGKFPDGNNELRLALYRL 1137
Query: 94 AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATG 153
A +G +Y+D E+ ++ +L +Q + T I S + S ++ ++ + +A
Sbjct: 1138 ALRMGVEYLDLEVTLSDEVL-QQVRESRGHTVIITSHHDPAGALSWKNASWISAYNRALQ 1196
Query: 154 -ADIIKLV---FSVNDITEIARI-FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVY 208
D+IKLV S+ D ++ R ++L+ PIIA ++G G +S++L NG L
Sbjct: 1197 YGDVIKLVGTARSIEDNFDLIRFKSRMLAAQPTPIIALNMGSAGKLSRVL----NGFLTP 1252
Query: 209 GSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
S P P + +RQ + + K F L KP+ S+ P LHN F V
Sbjct: 1253 VSHPALPFKAAPGQLSAAEIRQALSLLG-EIEPKSFYLFGKPISKSRSPALHNTLFGQVG 1311
Query: 266 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 325
Y + D ++ S DF G SV P K+ +M D++ + I AVNT+I
Sbjct: 1312 LPHEYKRLETDKVEDVVEVLRSADFGGASVTIPLKQDIMAHLDDLTEAVKIIGAVNTVIP 1371
Query: 326 RPSDG-----KLIGYNTDCEASITAIEDA-IKERGYKNGTASFGSPLAGRMFVLAGAGGA 379
+ +L G NTD + + + A +K ++G AS V+ GAGG
Sbjct: 1372 TADESLGGRQRLTGDNTDWKGMVHVLRSAGVKA---QSGDAS---------AVVVGAGGT 1419
Query: 380 GRALAFGAKSRG 391
RA F S G
Sbjct: 1420 SRAAIFALHSLG 1431
>gi|121701235|ref|XP_001268882.1| pentafunctional polypeptide (AroM), putative [Aspergillus clavatus
NRRL 1]
gi|327507652|sp|A1CP85.1|ARO1_ASPCL RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|119397025|gb|EAW07456.1| pentafunctional polypeptide (AroM), putative [Aspergillus clavatus
NRRL 1]
Length = 1587
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 167/374 (44%), Gaps = 48/374 (12%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + +N P D + + + LP++ R K GG + + H
Sbjct: 1074 GSDAVELRVDLLKDPSSSNGIPSVDYVAEQMSFLRSHTTLPLIFTIRTKSQGGFFPDEAH 1133
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+ ++ LA G ++VD E+ +L + S + ++ I S + S ++ +
Sbjct: 1134 EEAMQLYQLAFRSGCEFVDLEIAFPDELL-RTVSEMKGYSKIIASHHDPKGELSWANMSW 1192
Query: 145 LVSRMQATG-ADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLLS 199
+ +A D+IKLV + + + + S + VP+IA ++G+ G +S++L
Sbjct: 1193 MKYYNRALEYGDVIKLVGVATKLDDNTALRKFKSWAEEAHDVPLIAINMGDNGQLSRIL- 1251
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPILH 257
NG + S P P S + K + K F L P+ S+ P LH
Sbjct: 1252 ---NGFMTPVSHPALPFKAAPGQLSATEICKGLSLMGQIKKKRFALFGTPISESRSPALH 1308
Query: 258 NPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
N F + Y + +D+K+F +PDF G SV P K +M DE+ P A
Sbjct: 1309 NSLFAELGLPHEYTRLETANAEDVKEFIR---APDFGGASVTIPLKLDIMPLLDEIAPEA 1365
Query: 315 QAIAAVNTIIRRPSDG-----KLIGYNTDCEASITAIEDAIKERGY-KNGTASFGSPLAG 368
+ I AVNTI+ SDG +L+G+NTD + + + +A Y NG AS
Sbjct: 1366 EIIGAVNTIVPV-SDGEGKPQRLVGHNTDWQGMVQCLRNA---GAYGSNGDAS------- 1414
Query: 369 RMFVLAGAGGAGRA 382
++ G GG RA
Sbjct: 1415 --ALVVGGGGTCRA 1426
>gi|452983606|gb|EME83364.1| hypothetical protein MYCFIDRAFT_38952 [Pseudocercospora fijiensis
CIRAD86]
Length = 1615
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 168/400 (42%), Gaps = 41/400 (10%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLP 66
L + +V+Q+L + + GAD +E+R D + N P D + ++ + LP
Sbjct: 1077 LTSPTVQQLLPVLSEVTM-GADAIELRADLLVDPKSKNGLPTPDFLIEQVALLRSSSTLP 1135
Query: 67 VLIVYRPKWAGGLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
++ R GG + + D ++ +G D+VD EL + K+Y
Sbjct: 1136 LIFTLRSVSQGGRFPDNDLDLAIKLYREGLRMGFDFVDLELTAPVEV--KKYVLSHRKMC 1193
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGA----DIIKLV-----FSVNDITEIARIFQLL 176
I++ + D E G R A DI+KLV F ND + +
Sbjct: 1194 TIIASHHDPEATLAWSKGAPEWRKHFESACEYGDIVKLVGVAKSFDDNDDLKAFKKDMAF 1253
Query: 177 SHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA 236
+ +P+IA ++GE G +S++ NG + S P P S + KV + A
Sbjct: 1254 LYPDLPVIALNMGELGKMSRVT----NGFMTPVSHPALPSKAAPGQLSAAEIRKVLGLVA 1309
Query: 237 D--TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
K F L +P+ S+ P LHN F IY DD+K S +F G S
Sbjct: 1310 QIPAKKFYLFGRPIQQSRSPALHNTLFDLTGLPHIYSLHETDDIKTTVDIIRSAEFGGGS 1369
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTII-RRPSDGK--LIGYNTDCEASITAIEDAIK 351
V P K VM D + A I AVNTI+ + ++GK L+G+NTD + + A+
Sbjct: 1370 VTIPLKLDVMPLLDSIDSAASTIGAVNTIVPTKTAEGKTILVGHNTDWQGMVLAL----- 1424
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+N A G+ + ++ G GG RA + K G
Sbjct: 1425 ----RNAGAGAGNGVFKDSGMVIGGGGTARAAIYALKQMG 1460
>gi|346319592|gb|EGX89193.1| pentafunctional AROM polypeptide [Cordyceps militaris CM01]
Length = 1546
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 165/377 (43%), Gaps = 42/377 (11%)
Query: 36 GADVVEIRLDCINNFQPGKDLEIILTK-------KPLPVLIVYRPKWAGGLYEGDEHKRL 88
G+D VE+R+D +N+ +DL+ + + LP++ R GG + D + L
Sbjct: 1071 GSDAVELRVDLLNS----QDLDFVTEQVSILRQYTGLPIIFTVRTASQGGSFPDDATEAL 1126
Query: 89 EAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 147
AL HL LG++Y+D E+ A IL + SS + T+ I S + S + ++
Sbjct: 1127 LALYHLGLQLGSEYLDVEITTADEIL-ESVSSARGHTKLIASHHDPRGALSWRNASWIEH 1185
Query: 148 RMQATG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPKF 202
+A DI+KLV V D ++ R + Q PIIA ++G G +S++L
Sbjct: 1186 YNRALQYGDIVKLVGLAHKVEDNFDLVRFKSRTTSEQGPPIIAINMGTVGQLSRVL---- 1241
Query: 203 NGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNP 259
NG L S P P + +RQ + + + F L KP+ S+ P LHN
Sbjct: 1242 NGFLTPVSHPALPFKAAPGQLSAAEIRQALTLVG-QLEARNFYLFGKPISQSRSPALHNG 1300
Query: 260 TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAA 319
F Y + D+ P F G SV P K ++ DE+ A+ I A
Sbjct: 1301 LFDQCGLPHQYRLLETDNAIDVRPALRDPSFGGASVTIPLKLDIIGELDELTEAARIIGA 1360
Query: 320 VNTIIRRPS---DGK--LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
VNT+I S DG L+G NTD + + A+ +NG G + ++
Sbjct: 1361 VNTVIPLSSSVGDGTQHLLGDNTDWKGIVHAL---------RNG--GIGEVTSNSTAMVI 1409
Query: 375 GAGGAGRALAFGAKSRG 391
G+GG RA F + G
Sbjct: 1410 GSGGTTRAAVFALHTLG 1426
>gi|393233433|gb|EJD41005.1| Pentafunctional AroM protein [Auricularia delicata TFB-10046 SS5]
Length = 1557
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 165/374 (44%), Gaps = 37/374 (9%)
Query: 36 GADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEAL 91
GAD VE+R+D + + + + ++ LP++ R K GG + ++ K L+ +
Sbjct: 1075 GADAVELRVDLLASTDHAYVREQVALLRGATSLPIVYTVRTKAQGGAFPDEKTKEALDLI 1134
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSR--M 149
L L +Y+D EL + + G G +++ D D + ++ +
Sbjct: 1135 ELGRRLACEYLDVELSLP--VAGVDTLVKNKGKSKVIASWHDWSGKMRWDGPDVKAKYAL 1192
Query: 150 QATGADIIKLVFSVNDITEIARIFQLLSHC----QVPIIAYSVGERGLVSQLLSPKFNGA 205
A DI+K+V + N I + + + + + P++A ++G G +S++L+P +
Sbjct: 1193 AAAFGDIVKIVGAANSIQDNFALRRFVDSVSGPGRPPVLAINMGAAGQMSRILNPVLS-P 1251
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFGLISKPVGHSKGPILHNPTFRH 263
+ + L P P S+ Q + H+ + F L P+ S P LHN F+
Sbjct: 1252 VTHPLL---PTRAAPGQLSVAQIQQALHLLGLLPARQFFLFGTPISKSMSPTLHNTGFKE 1308
Query: 264 VNYNGIYVPMFVDDLKKFF-STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
+ Y + ++ + + F G SV P+K A++ D V P AQAI AVNT
Sbjct: 1309 LGLPHTYGLLETAEVDETIRAALKDNAFGGASVTIPHKLAIIPLLDAVSPHAQAIGAVNT 1368
Query: 323 IIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF-VLAGAGGAGR 381
+IR+ +DG L G NTD ++ A G+P G + GAGG R
Sbjct: 1369 VIRQ-ADGSLYGDNTD----------------WRGIVACVGTPPQGEWTGCVLGAGGTAR 1411
Query: 382 ALAFGAKSRGARVV 395
A + K+ GA V
Sbjct: 1412 AAVYALKALGASRV 1425
>gi|261403468|ref|YP_003247692.1| 3-dehydroquinate dehydratase [Methanocaldococcus vulcanius M7]
gi|261370461|gb|ACX73210.1| 3-dehydroquinate dehydratase, type I [Methanocaldococcus vulcanius
M7]
Length = 223
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 8/221 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ SVE+ L + + + +D+VE R+D +NN + +D+E P +I
Sbjct: 1 MICLPVVENSVEKALK-VAEEYLKVSDIVEFRVDMMNNVKE-EDIEKF---SKYPCIITV 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH-QSGTRFIVSC 130
RPKW GG ++G E +RL+ L A + A +VD ELK N + + S T+ I+S
Sbjct: 56 RPKWEGGFWKGSEEERLKLLKKAIECNAKFVDIELKEKKNKDLVNFRNEIGSKTKIIISY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TPS+++L +V + G DI K VND ++ +I + II +GE
Sbjct: 116 HDFEKTPSKKELEEVVEKALELG-DIAKFATMVNDKKDVLKILHTIYKYSGNIIGIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYK 230
+G ++++L F L + S G + G V SL++ +K
Sbjct: 175 KGKLTRILGIYFGSVLTFASYGGKSSAPGQIDVFSLKEIWK 215
>gi|302674061|ref|XP_003026716.1| hypothetical protein SCHCODRAFT_83545 [Schizophyllum commune H4-8]
gi|300100400|gb|EFI91813.1| hypothetical protein SCHCODRAFT_83545 [Schizophyllum commune H4-8]
Length = 1635
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 170/384 (44%), Gaps = 51/384 (13%)
Query: 36 GADVVEIRLDCINNFQPG------------KDLEIILTKKP-LPVLIVYRPKWAGGLYEG 82
G D VE+R+D + + Q G +D +L + LP++ R K GG +
Sbjct: 1132 GVDAVELRVDLLRSPQGGSAGVYIPPAAYVRDQVALLRRATNLPIVYTVRTKAQGGAFPD 1191
Query: 83 DEHKRLEALHLAEDL-GADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEED 141
D+ AL G +Y+D E+ + S+ + Q ++ + I S + D D
Sbjct: 1192 DQSAAAAALLDLALRLGVEYIDVEISLPSDHI-HQLVKNKGYAQLIASWH-DWTGAMRWD 1249
Query: 142 LGYLVSR--MQATGADIIKLVFSVNDITE-IARIFQLLSHCQVPIIAYSVGERGLVSQLL 198
+ ++ AT DI+K+V N + + +A + +H + P+IA ++GE G +S++L
Sbjct: 1250 GADVAAKYAQAATFGDIVKIVGKANALEDNLALLDFARAHDRKPLIALNMGEAGQMSRVL 1309
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPIL 256
F V S P P S Q + H+ K F L P+ HS P L
Sbjct: 1310 GTCF----VPVSHPKLPFKAAPGQLSFAQIQQALHLLGALPAKKFYLFGTPIAHSMSPTL 1365
Query: 257 HNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312
HN F + Y+ + D++K + S+PDF G SV P+K V+ DE+
Sbjct: 1366 HNTGFAALGLPHTYSLLETSTVGDEIK---AAVSAPDFGGASVTIPFKLDVIPLLDELSD 1422
Query: 313 LAQAIAAVNTIIRRPSDGKLI--GYNTDCEASITAIEDAIKER--GYKNGTASFGSPLAG 368
A+ I AVNTII D K I G NTDC I+ A+ R G + G+A
Sbjct: 1423 AAKVIGAVNTIIPIQRDSKRILRGDNTDC----LGIQAAVTSRLAGARVGSA-------- 1470
Query: 369 RMFVLAGAGGAGRALAFGAKSRGA 392
++ GAGG RA + + GA
Sbjct: 1471 ---LVLGAGGTARAAIYALHALGA 1491
>gi|392586617|gb|EIW75953.1| Pentafunctional AroM protein [Coniophora puteana RWD-64-598 SS2]
Length = 1637
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 166/394 (42%), Gaps = 50/394 (12%)
Query: 35 EGADVVEIRLDCINN-------FQPG----------KDLEIILTKKPLPVLIVYRPKWAG 77
EG D +E+R+D + PG + L + LP++ R G
Sbjct: 1129 EGVDALELRVDLLRAPKDLDKPVAPGTYIPPAAYVAEQLAALRRATSLPIVFTVRTVSQG 1188
Query: 78 GLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
G + +G E + E L LA G +YVD E+ + + + G IV+ D
Sbjct: 1189 GAFPDGAEKEAFELLELAVKNGVEYVDVEITFDQQRIKELATRAHRGHSQIVASFHDWSG 1248
Query: 137 PSEEDLGYLVSRMQATG--ADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVG 189
+ + + + +DI+K+V N++ + +F+ +S + PIIA ++G
Sbjct: 1249 SMKWSEALVKDKYKVASELSDIVKIVGKANELKDNFALFEFVSRVEAQPGAKPIIAINMG 1308
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKP 247
G +S++L N L + P P S Q + H+ + F L P
Sbjct: 1309 AEGQLSRVL----NRTLTPVTHPLLPSKAAPGQLSFAQIQQALHLAGQLPARRFFLFGTP 1364
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDL-KKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
+ S P LHN F + Y + D+ ++ +T +SPDF G SV P+K VM
Sbjct: 1365 ISQSPSPTLHNTGFATLGLPHQYDLLETSDVGEQIRATLASPDFGGASVTIPHKLDVMPL 1424
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGK-----LIGYNTDCEASITAIEDAIKERGYKNGTAS 361
D + P A+AI AVNTII S+G L+G NTD + I E+
Sbjct: 1425 LDRLTPAAEAIGAVNTIIPT-SEGASGARILVGDNTDW----LGMRACILEKQP------ 1473
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
S A ++ GAGG RA + +S GA+ +
Sbjct: 1474 --SLAAPAAALVIGAGGTARAAIYALQSLGAKRI 1505
>gi|225866315|ref|YP_002751693.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB102]
gi|254806731|sp|C1ESM8.1|AROE_BACC3 RecName: Full=Shikimate dehydrogenase
gi|225789755|gb|ACO29972.1| shikimate dehydrogenase [Bacillus cereus 03BB102]
Length = 277
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + +GKL GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLTGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
PL + +L GAGGA RA+ F G +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVK 145
>gi|449123706|ref|ZP_21760028.1| shikimate 5-dehydrogenase [Treponema denticola OTK]
gi|448943959|gb|EMB24841.1| shikimate 5-dehydrogenase [Treponema denticola OTK]
Length = 493
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 170/365 (46%), Gaps = 29/365 (7%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRLE------ALHLAEDL-GADYVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ A A+ + Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFANADPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQLLSHC 179
+ I S L + P + ++ V + DI KL F+ +ND++E+ + +L+ +
Sbjct: 118 DIKIIRS--LHSKVPVK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKNQ 174
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
+ I +G GL S++LS K N +VY K L E+L + Y I
Sbjct: 175 EY--ILSVMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 353 -RGYK 356
R YK
Sbjct: 351 LRKYK 355
>gi|449131376|ref|ZP_21767592.1| shikimate 5-dehydrogenase [Treponema denticola SP37]
gi|448940209|gb|EMB21120.1| shikimate 5-dehydrogenase [Treponema denticola SP37]
Length = 493
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 29/365 (7%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRL----EALHLAED---LGADYVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ L A Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQLLSHC 179
+ I S L + P + ++ V + DI KL F+ +ND++E+ + +L+ +
Sbjct: 118 DIKIIRS--LHSKVPVK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKNQ 174
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
+ I +G GL S++LS K N +VY K L E+L + Y I
Sbjct: 175 EY--ILSVMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 353 -RGYK 356
R YK
Sbjct: 351 LRKYK 355
>gi|449128721|ref|ZP_21764967.1| shikimate 5-dehydrogenase [Treponema denticola SP33]
gi|448941129|gb|EMB22033.1| shikimate 5-dehydrogenase [Treponema denticola SP33]
Length = 493
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 166/365 (45%), Gaps = 29/365 (7%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGAD-------YVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ + Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFASSDPIKNFAYIDLESDFDSS--GIEEAAMAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYL--VSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
+ I S L + P + + + +SR + DI KL F+ N + +I+ +F+ Q
Sbjct: 118 DIKIIRS--LHSKVPVKNIVKTIEGLSRFET---DIPKLAFTANCLNDISELFKASKLIQ 172
Query: 181 VPIIAYSV-GERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
SV G GL S++LS + N +VY K L E+L + Y I
Sbjct: 173 NQEYILSVMGPYGLSSRILSKQLNSQIVYTFTPEYIKKNKLEQELIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ DT+++G+I K V S P +HN F N N +Y+P+ K+ + + G S
Sbjct: 233 DNDTRLYGVIGKDVNTSLSPQIHNKGFEQKNLNSVYIPISAVSSKEALDFANFLNIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT+I + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPQINSISEASKFIGAVNTLINE--NKKWFGYNTDVDGFQQALIEFLNEKD 350
Query: 353 -RGYK 356
R YK
Sbjct: 351 LRKYK 355
>gi|340992667|gb|EGS23222.1| pentafunctional arom polypeptide-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1581
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 157/374 (41%), Gaps = 30/374 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK-RLEAL 91
G+D VE+R+D + +++P + + ++ +P++ R + GG + +++ L
Sbjct: 1081 GSDAVELRVDLLESYEPEFVARQVALLRAAAQVPIVYTVRTQSQGGKFPDEDYDLALRLY 1140
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS--RM 149
G +Y+D E+ + +IL Q + G I++ + D + G +
Sbjct: 1141 QTGLRSGVEYLDLEMTMPDHIL--QAVTDAKGFTSIIASHHDPQCKLSWKSGSWIPFYNK 1198
Query: 150 QATGADIIKLVFSVNDITEIARIFQ-----LLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
D+IKLV ++ + + L +H P+IA ++G G +S++L NG
Sbjct: 1199 ALQYGDVIKLVGVAREMADNFALTNFKAKMLAAHDNKPMIALNMGTAGKLSRVL----NG 1254
Query: 205 ALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTF 261
L S P P + +RQ + + K F L KP+ S+ P LHN F
Sbjct: 1255 FLTPVSHPALPSKAAPGQLSATEIRQALSLIG-EIEPKSFYLFGKPISASRSPALHNTLF 1313
Query: 262 RHVNYNGIYVPMFVDDLKKFF-STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAV 320
Y D+ K S SPDF G SV P K +M D A+ I AV
Sbjct: 1314 YKTGLPHHYSRFETDEASKALESLIRSPDFGGASVTIPLKLDIMPLLDSATDAARTIGAV 1373
Query: 321 NTIIRRPSDGK---LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAG 377
NTII + DG L+G NTD + A+ + G + +P M V G+G
Sbjct: 1374 NTIIPQTRDGSTTTLVGDNTDWRGMVHAL---LHSSGSGSVVQRTAAPRGAAMVV--GSG 1428
Query: 378 GAGRALAFGAKSRG 391
G RA + G
Sbjct: 1429 GTARAAIYALHDLG 1442
>gi|376261037|ref|YP_005147757.1| shikimate 5-dehydrogenase [Clostridium sp. BNL1100]
gi|373945031|gb|AEY65952.1| shikimate 5-dehydrogenase [Clostridium sp. BNL1100]
Length = 294
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 16/163 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
VE +N T+++G++ P+ H+K P +HN F+ N +Y+P+ V++ L++
Sbjct: 4 VEIVNGKTQLYGVLGNPIEHTKSPFIHNTLFKKFGVNAVYLPVLVENGKLEQVMDGLKGI 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+F GF+V PYK+ V+K+ DEV + A+NT+ + +G+ IG NTD E +
Sbjct: 64 NFLGFNVTVPYKKDVIKYLDEVSAEGMLMGAINTV--KKQNGRFIGTNTDAEGFV----- 116
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
R + +G F + G+ +L GAGG RA+A + G
Sbjct: 117 ----RDFCDG---FETTFKGKRVMLLGAGGTSRAIAVKLATEG 152
>gi|449541458|gb|EMD32442.1| hypothetical protein CERSUDRAFT_161831 [Ceriporiopsis subvermispora
B]
Length = 1621
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 174/406 (42%), Gaps = 48/406 (11%)
Query: 22 VEQVLSNMYQAKAEGADVVEIRLDCINN---------FQPG-----KDLEIILTKKPLPV 67
+ + L ++ Q A G D VE+R+D + + + P + + +K LP+
Sbjct: 1102 ITRALPHIEQLTA-GVDAVELRVDLLRSPKDFDKLGPYVPSVAYVTDQVAALRSKTDLPI 1160
Query: 68 LIVYRPKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
+ R GG + D K L H A LG +YVD E+ + + Q + G
Sbjct: 1161 VFTVRTVSQGGQFPDDAEKEAFTLFHTAIRLGVEYVDVEITWSEKSI--QDLVVRKGHSQ 1218
Query: 127 IVSCNLDCETPSEEDLGYLVS---RMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-- 181
IV+ D D G +V R+ DI+KLV N++ + +++ + +
Sbjct: 1219 IVASWHDWSGNMAWD-GKVVEAKYRIAHAFGDIVKLVGKANELDDSLALYRFVQRMRASS 1277
Query: 182 ---PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NA 236
PIIA ++G G +S++L+ F+ S P P S Q ++
Sbjct: 1278 DAKPIIAINMGTEGQLSRILNSTFSPV----SHPLLPSKAAPGQLSFAQIQTALNLIGQL 1333
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
+ F L P+ HS P LHN F + Y + + + + +T +S DF G SV
Sbjct: 1334 PARRFFLFGNPIKHSMSPTLHNTGFEILGLPHKYELLETETIGEIKATLASSDFGGASVT 1393
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTII-RRPSDGKLIGY--NTDCEASITAIEDAIKER 353
P+K V+ D + P A+AI AVNTII +R +DG I Y NTD +I A+
Sbjct: 1394 IPFKLDVLPLLDALSPEAEAIGAVNTIIPQRKADGSCILYGDNTDWLGISRSIRTAMP-- 1451
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD 398
S P A ++ GAGG RA + G R+ +F+
Sbjct: 1452 ------TSMKHPEAA---LVIGAGGTSRAAIYALHKLGVQRIYLFN 1488
>gi|449109291|ref|ZP_21745927.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33520]
gi|448959099|gb|EMB39821.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33520]
Length = 493
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 29/365 (7%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRL----EALHLAED---LGADYVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ L A Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQLLSHC 179
+ I S L + P + ++ V + DI KL F+ +ND++E+ + +L+ +
Sbjct: 118 DIKIIRS--LHSKVPVK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKNQ 174
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
+ I +G GL S++LS K N +VY K L E+L + Y I
Sbjct: 175 EY--ILSVMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLV--SENKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 353 -RGYK 356
R YK
Sbjct: 351 LRKYK 355
>gi|422342123|ref|ZP_16423063.1| hypothetical protein HMPREF9353_01729 [Treponema denticola F0402]
gi|325474191|gb|EGC77379.1| hypothetical protein HMPREF9353_01729 [Treponema denticola F0402]
Length = 771
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 173/371 (46%), Gaps = 41/371 (11%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----L 65
+T +C L +++E+ LS + + K + D+ E+R+D +N + + L P +
Sbjct: 280 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEI-----LYLRNFPERAGI 333
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLE------ALHLAEDL-GADYVDFELKVASNILGKQYS 118
P ++ R K GG + G E R+ A A+ + Y+D E S+ G + +
Sbjct: 334 PCILTVRRKSDGGNFTGGEGARMTIFARGLAFANADPIKNFSYIDLESDFDSS--GIEEA 391
Query: 119 SHQSGTRFIVSCNLDCETPSEEDLGYL--VSRMQATGADIIKLVFS---VNDITEIARIF 173
+ + I S L + P + + + +SR + DI KL F+ +ND++E+ +
Sbjct: 392 ARAFDIKIIRS--LHSKVPVKNIVKTIEGLSRFET---DIPKLAFTANCLNDVSELFKAS 446
Query: 174 QLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQT 228
+L+ + + I +G GL S++LS K N +VY K L E+L +
Sbjct: 447 KLIKNQEY--ILSVMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEEL 504
Query: 229 YKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSP 288
Y I+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ +
Sbjct: 505 YGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLL 564
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G SV P+K ++ + + ++ I AVNT+I + K GYNTD + A+ +
Sbjct: 565 KIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLI--TENKKWFGYNTDVDGFQQALME 622
Query: 349 AIKE---RGYK 356
+ E R YK
Sbjct: 623 FLNEKDLRKYK 633
>gi|449115970|ref|ZP_21752430.1| shikimate 5-dehydrogenase [Treponema denticola H-22]
gi|449119976|ref|ZP_21756363.1| shikimate 5-dehydrogenase [Treponema denticola H1-T]
gi|449122373|ref|ZP_21758713.1| shikimate 5-dehydrogenase [Treponema denticola MYR-T]
gi|448948129|gb|EMB28967.1| shikimate 5-dehydrogenase [Treponema denticola MYR-T]
gi|448948596|gb|EMB29430.1| shikimate 5-dehydrogenase [Treponema denticola H1-T]
gi|448955456|gb|EMB36223.1| shikimate 5-dehydrogenase [Treponema denticola H-22]
Length = 493
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 29/365 (7%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRL----EALHLAED---LGADYVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ L A Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQLLSHC 179
+ I S L + P + ++ V + DI KL F+ +ND++E+ + +L+ +
Sbjct: 118 DIKIIRS--LHSKVPVK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKNQ 174
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
+ I +G GL S++LS K N +VY K L E+L + Y I
Sbjct: 175 EY--ILSVMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 353 -RGYK 356
R YK
Sbjct: 351 LRKYK 355
>gi|315222537|ref|ZP_07864426.1| shikimate 5-dehydrogenase [Streptococcus anginosus F0211]
gi|315188223|gb|EFU21949.1| shikimate 5-dehydrogenase [Streptococcus anginosus F0211]
Length = 284
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 83/162 (51%), Gaps = 19/162 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK D
Sbjct: 3 IDGYTRLVAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYDMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
+G+ SF + G+ V+ GAGGA A+ A GA
Sbjct: 109 -KGFFMSLPSF--VIKGKKMVMLGAGGAATAIIVQAALDGAE 147
>gi|50294858|ref|XP_449840.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608179|sp|Q6FIV4.1|ARO1_CANGA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|49529154|emb|CAG62820.1| unnamed protein product [Candida glabrata]
Length = 1579
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 174/396 (43%), Gaps = 59/396 (14%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQP---GKDLEII-LTKKPLPVLIVYRPKWAGGLYEG 82
+N +A G D VE+R+D ++N K + I+ + LP++ R K GG +
Sbjct: 1081 TNSLKAITYGCDAVEVRVDHLSNMDEDFVSKQISILRASTDGLPIIFTVRTKKQGGKFPD 1140
Query: 83 DEHKRLEALHL-AEDLGADYVDFELKVASNILGKQYS--SHQSGTRFIVSCNLDCETPSE 139
++++ L+ L + A +G DY+D EL + +G QY + + T+ I+ + D +
Sbjct: 1141 EDYETLQKLLITALKVGVDYIDLELTLP---IGIQYKVLNMKRNTK-IIGSHHDFASAYP 1196
Query: 140 EDLGYLVSRMQ---ATGADIIKLV-----FSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
D +R A DI+K V F N + E R SH P+IA ++G
Sbjct: 1197 WDHSEWENRYNQALAMDVDIVKFVGMAKSFEDNLMLERFRD----SHTTKPLIAINMGAH 1252
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHS 251
G VS++L+ + L G TV + + Y E K F ++ P+GHS
Sbjct: 1253 GRVSRVLNTILT-PVTSEHLSEVAAPGQLTVAEINRIY-TEMGGITKKDFFVVGSPIGHS 1310
Query: 252 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS----------PDFAGFSVGFPYKE 301
+ P+LHN Y+ + +P D KF +T + + G +V P K
Sbjct: 1311 RSPVLHN-----TGYSVLGLPHHFD---KFETTSAEEVKKHLLDNKANLGGLAVTIPLKL 1362
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
++K+ DE+ A+ I AVNT+I + K G NTD G +N S
Sbjct: 1363 DIIKYMDELTESAKVIGAVNTVIPL-GNSKFKGDNTDW-------------LGIRNSLVS 1408
Query: 362 FGSP--LAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G P ++G ++ GAGG RA F G + +
Sbjct: 1409 NGVPESVSGLSGLVVGAGGTSRAAIFALHKLGCQKI 1444
>gi|20807710|ref|NP_622881.1| shikimate 5-dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|254479120|ref|ZP_05092471.1| shikimate 5-dehydrogenase [Carboxydibrachium pacificum DSM 12653]
gi|24211499|sp|Q8RAG2.1|AROE_THETN RecName: Full=Shikimate dehydrogenase
gi|20516261|gb|AAM24485.1| Shikimate 5-dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|214034934|gb|EEB75657.1| shikimate 5-dehydrogenase [Carboxydibrachium pacificum DSM 12653]
Length = 280
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ TKVFGLI PV HS P++HN +F +N+NG+YV V + L+ +
Sbjct: 3 IDSTTKVFGLIGHPVKHSLSPLIHNSSFEKLNFNGVYVVFDVAPELLENAVKGLKALGIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+KE+VM + D V A+ I AVNT++ +G L GYNTD + I D++K
Sbjct: 63 GFNVTVPHKESVMNYLDFVTEEAEKIGAVNTVVNE--NGILKGYNTDVQGFI----DSLK 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
E + GR + GAGGA +A+ F G ++
Sbjct: 117 E---------LKEDVRGRKAFVLGAGGASKAICFALAREGVESIV 152
>gi|379012573|ref|YP_005270385.1| shikimate dehydrogenase [Acetobacterium woodii DSM 1030]
gi|375303362|gb|AFA49496.1| shikimate dehydrogenase AroE [Acetobacterium woodii DSM 1030]
Length = 286
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ DTK++ +I P+ S P LHN F+ + +Y+P+ V ++L+ + +F
Sbjct: 2 KISVDTKIYAVIGDPIAQSLSPQLHNGLFKEAGVDALYLPIAVKSENLENLIKGFRVMNF 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF++ P+K ++K+ DE+ PLAQ I AVNT++ R DGK+ GYNTD I +IE+ I
Sbjct: 62 GGFNITKPHKMEIIKYLDELDPLAQKIGAVNTVVYR--DGKMKGYNTDGFGFIKSIENKI 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
++ P ++ G GGA +++A G V+
Sbjct: 120 VDQ-----------PKEKLNILILGCGGAVKSVAMALADWGINQVMI 155
>gi|388854816|emb|CCF51497.1| probable ARO1-Pentafunctional AROM polypeptide [Ustilago hordei]
Length = 1708
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 175/398 (43%), Gaps = 46/398 (11%)
Query: 29 MYQAKAEGADVVEIRLDCIN-NFQP------------GKDLEIILTKKPLPVLIVYRPKW 75
+ ++ GAD +E R D +N + QP L + + LP++ R
Sbjct: 1181 LIRSMESGADALEFRADLLNPSGQPVTTPQVPPNDFVRNQLAALRHRTSLPIVFTVRTHS 1240
Query: 76 AGGLYEGDEHKR-LEALHLAEDLGADYVDFEL----KVASNILGKQYSSHQSGTRFIVSC 130
GG++ + K + + LA G +Y+D EL + + ++ + +S + S
Sbjct: 1241 QGGMFPDNHQKEYFDLISLALRHGCEYIDLELGFDDSLLTAVVEAKANSQIIASHHDWSG 1300
Query: 131 NLDCETPSEEDLGYLVSRMQATG--ADIIKLVFSVNDITEIARIFQLLSHCQV-PIIAYS 187
NLD E+ + + +R G A II S+ D + R +S P++A +
Sbjct: 1301 NLDWES---DTTAAIYTRACQFGDIAKIIGKANSMEDNYSLERFRAKVSASATKPLLAVN 1357
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLIS 245
+G G S++++P F + + ++ PV P + RQ + T F L
Sbjct: 1358 MGAAGQFSRVVNPVFT-PITHETM---PVKAAPGQLTFRQIQTALALIGQTTALKFALFG 1413
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPYKEAVM 304
P+ HS P+LHN F + Y ++ + Y S DF G SV P+K A++
Sbjct: 1414 SPISHSLSPVLHNTAFGALGLPHHYELFETAEVDDAIAAYVRSGDFGGASVTIPHKLAII 1473
Query: 305 KFCDEVHPLAQAIAAVNTIIR-RPSDGK---LIGYNTDCEASITAIEDAIKERGYKNGTA 360
K+ D+V A+AI AVNT+I R ++GK L+G NTD A T +++ T
Sbjct: 1474 KYLDQVSDEAKAIGAVNTVIPIRDAEGKVTALLGDNTDWIAIETLARRSLR-------TV 1526
Query: 361 SFGSP-LAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
P L G ++ GAGG+ RA F G + ++
Sbjct: 1527 HLADPNLTG---LVIGAGGSARAALFALYRLGVKKILL 1561
>gi|449107487|ref|ZP_21744141.1| shikimate 5-dehydrogenase [Treponema denticola ASLM]
gi|451969179|ref|ZP_21922408.1| shikimate 5-dehydrogenase [Treponema denticola US-Trep]
gi|448961687|gb|EMB42382.1| shikimate 5-dehydrogenase [Treponema denticola ASLM]
gi|451702047|gb|EMD56481.1| shikimate 5-dehydrogenase [Treponema denticola US-Trep]
Length = 493
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 29/365 (7%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRL----EALHLAED---LGADYVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ L A Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQLLSHC 179
+ I S L + P + ++ V + DI KL F+ +ND++E+ + +L+ +
Sbjct: 118 DIKIIRS--LHSKVPIK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKNQ 174
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
+ I +G GL S++LS K N +VY K L E+L + Y I
Sbjct: 175 EY--ILSVMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 353 -RGYK 356
R YK
Sbjct: 351 LRKYK 355
>gi|449102531|ref|ZP_21739279.1| shikimate 5-dehydrogenase [Treponema denticola AL-2]
gi|448966120|gb|EMB46778.1| shikimate 5-dehydrogenase [Treponema denticola AL-2]
Length = 493
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 169/367 (46%), Gaps = 33/367 (8%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGAD-------YVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ + Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFASSDPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYL--VSRMQATGADIIKLVFS---VNDITEIARIFQLLS 177
+ I S L + P + + + +SR + DI KL F+ +ND++E+ + +L+
Sbjct: 118 DIKIIRS--LHSKVPVKNIVKAIEGLSRFET---DIPKLAFTANCLNDVSELFKASKLIK 172
Query: 178 HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVE 232
+ + I +G GL S++LS K N +VY K L E+L + Y
Sbjct: 173 NQEY--ILSVMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFS 230
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAG 292
I+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G
Sbjct: 231 KIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKG 290
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
SV P+K ++ + + ++ I A+NT++ + K GYNTD + A+ + + E
Sbjct: 291 LSVTAPFKSEIIPLINSISEASKFIGAINTLV--SENKKWFGYNTDVDGFQQALMEFLNE 348
Query: 353 ---RGYK 356
R YK
Sbjct: 349 KDLRKYK 355
>gi|365983398|ref|XP_003668532.1| hypothetical protein NDAI_0B02540 [Naumovozyma dairenensis CBS 421]
gi|343767299|emb|CCD23289.1| hypothetical protein NDAI_0B02540 [Naumovozyma dairenensis CBS 421]
Length = 1572
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 170/382 (44%), Gaps = 57/382 (14%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G D VE+R+D + N+ P + L I+ T LP++ R K GG + +E++ +E L
Sbjct: 1083 GCDAVEVRVDHLANYDPDYVNRQLSILRTSTDSLPIIFTIRTKKQGGNFPDEEYEAIEEL 1142
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYS--SHQSGTRFIVSCNLDCETPSEEDLGYLVSR 148
+ A G +Y+D EL + ++I QY+ +++ T+ I S + D +
Sbjct: 1143 YKTALKSGVEYIDLELTLPTSI---QYNVLNNKRFTKIIGSHHDFAAAYPWGDAEWENRY 1199
Query: 149 MQATG--ADIIKLV-----FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPK 201
+QA DIIK V F N + E R +H + P+IA ++ E G +S++L
Sbjct: 1200 IQALALDVDIIKFVGTATKFEDNLVLEKFRD----AHKEKPLIAINMTECGKISRVL--- 1252
Query: 202 FNGALVYGSLKGTPVLGLPTVESLRQTYKV--EHINADTKVFGLISKPVGHSKGPILHNP 259
N L + P P +L+Q ++ +K F ++ P+GHS+ PILHN
Sbjct: 1253 -NTVLTPITSHLLPSASAPGQLTLKQINEIYTSMGGLSSKEFFVVGTPIGHSRSPILHN- 1310
Query: 260 TFRHVNYNGIYVPMFVDDLKKFFSTYSS-------PDFAGFSVGFPYKEAVMKFCDEVHP 312
Y + +P D + + S P+ G +V P K ++K+ E+
Sbjct: 1311 ----TGYELLGLPYNFDKYETDSAEVISKELLEGKPNLGGLAVTIPLKLDIIKYMSELTD 1366
Query: 313 LAQAIAAVNTIIRRPSDGKLI-GYNTDCEASITAIEDAIKERGYKNGTASFGSP--LAGR 369
A+AI AVNT+I P K G NTD G KN S G P + G
Sbjct: 1367 AAKAIGAVNTVI--PLGNKTFRGDNTDW-------------LGIKNSLVSNGVPESVKGT 1411
Query: 370 MFVLAGAGGAGRALAFGAKSRG 391
++ GAGG RA F G
Sbjct: 1412 AGLIIGAGGTSRAAVFALHKMG 1433
>gi|74599755|sp|Q5XNP0.1|ARO1_SCLSC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|53854589|gb|AAU95677.1| arom [Sclerotinia sclerotiorum]
Length = 1590
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 164/375 (43%), Gaps = 29/375 (7%)
Query: 34 AEGADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGD 83
A G+D VE+R+D + N PG D + + + LPV+ R GG +
Sbjct: 1072 AVGSDAVEVRVDLLEDPSSTNGIPGTDFLSVQIAHLRSVVHLPVIFTVRTVSQGGRFPDA 1131
Query: 84 EHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
H+ L+ LA +G +Y+D E+ +L ++ + + +R I S + T S ++
Sbjct: 1132 AHEEALKLYKLAVKMGIEYIDLEIAFPDELL-QEVTEAKGFSRIIASHHDPQGTLSWKNG 1190
Query: 143 GYLVSRMQATG-ADIIKLVFSVNDITE---IARIFQLLSHCQ-VPIIAYSVGERGLVSQL 197
G+ +A DIIKLV S I + +A+ + ++ P+IA ++G G +S++
Sbjct: 1191 GWFQHYNRALQYGDIIKLVGSAKSIEDNFALAKFKKTMAAAHDTPLIAINMGVTGKLSRV 1250
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILH 257
L+ F + + SL G + +R T + K F L P+ S+ P LH
Sbjct: 1251 LN-GFMTPVSHPSLPFKAAPGQLSAAEIRSTLSTLG-EIEPKSFYLFGTPISQSRSPALH 1308
Query: 258 NPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317
N F+ Y + D + +PDF G SV P K ++ D V + I
Sbjct: 1309 NTLFKQTGLPHRYSRLETDRVADVQDVIRAPDFGGASVTIPLKLDIIPLLDSVTDAVKVI 1368
Query: 318 AAVNTIIRRPSD-GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGA 376
AVNTII P + +L+G NTD ++ A + + SP ++ GA
Sbjct: 1369 GAVNTIIPTPDNPPRLVGENTDWLGMTHSLMSA------SHTPSPVDSPSPA---LVIGA 1419
Query: 377 GGAGRALAFGAKSRG 391
GG RA + S G
Sbjct: 1420 GGTARAAIYALHSLG 1434
>gi|400593009|gb|EJP61023.1| pentafunctional AROM polypeptide [Beauveria bassiana ARSEF 2860]
Length = 1562
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 160/379 (42%), Gaps = 46/379 (12%)
Query: 36 GADVVEIRLDCINNFQPGKDLE-------IILTKKPLPVLIVYRPKWAGGLYEGDEHKRL 88
G+D VE+R+D + + +DL+ I+ LP++ R GG + D + L
Sbjct: 1071 GSDAVELRVDLLRS----QDLDFVTEQVSILRQHTGLPIIFTVRTASQGGSFPDDATEAL 1126
Query: 89 EAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 147
AL HL LG +Y+D E+ +IL + + T+ I S + T S + ++
Sbjct: 1127 SALYHLGLRLGTEYLDVEITTPDHIL-ESVGLARGHTKLIASHHDPRGTLSWRNASWIAH 1185
Query: 148 RMQATG-ADIIKLVFSVNDITEIARIFQ----LLSHCQVPIIAYSVGERGLVSQLLSPKF 202
+A DIIKLV + + +F+ + S PIIA ++G G +S++L
Sbjct: 1186 YNRALQYGDIIKLVGLAQKVEDNFDLFRFKSRMASDGSPPIIAINMGTAGQLSRVL---- 1241
Query: 203 NGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNP 259
NG L S P P + +RQ + + F L KP+ S+ P LHN
Sbjct: 1242 NGFLTPVSHPALPFKAAPGQLSATEIRQALALVG-QLEGCSFFLFGKPISQSRSPSLHNG 1300
Query: 260 TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAA 319
F Y M D++ +T P F G SV P K ++ DE+ A+ I A
Sbjct: 1301 LFAQCGLPHRYHLMETDNVADVRATLRDPSFGGASVTIPLKLDIIDELDELTEAARTIGA 1360
Query: 320 VNTIIRRPSDG-------KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFV 372
VNT+I P G +L+G NTD + + A+ G +
Sbjct: 1361 VNTVI--PFSGSVGDGTKRLLGDNTDWKGIVHALR-----------VGGLGEISGDSAAM 1407
Query: 373 LAGAGGAGRALAFGAKSRG 391
+ G+GG RA F S G
Sbjct: 1408 VIGSGGTTRAAVFALHSLG 1426
>gi|68466574|ref|XP_722769.1| hypothetical protein CaO19.4704 [Candida albicans SC5314]
gi|74591846|sp|Q5AME2.1|ARO1_CANAL RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|46444766|gb|EAL04039.1| hypothetical protein CaO19.4704 [Candida albicans SC5314]
Length = 1551
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 163/365 (44%), Gaps = 29/365 (7%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
GAD VE+R+D + + +I LP++ R GG + + L++L
Sbjct: 1067 GADAVELRVDLFKDTSAEFVAAQIAVIRKHADLPIIYTVRTMSQGGKFPDENVDELKSLL 1126
Query: 93 L-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC-NLDCETPSEE-DLGYLVSRM 149
L LG YVD +L A N L ++ SS + TR I + +++ E + ++
Sbjct: 1127 LLGIRLGVAYVDLQL-TAPNELIEEISSKKGFTRVIGTYQDINGELKWNNVEWKNKYNQG 1185
Query: 150 QATGADIIKLVFSVNDITEIARIFQLLSHCQV-PIIAYSVGERGLVSQLLSPKFNGALVY 208
+ ADI++LV N I + + + P+IA+++G +G +SQ+L NG
Sbjct: 1186 VSMNADIVRLVGKANSIQDNLDLENFKKQNTLKPLIAFNLGSQGKLSQVL----NGTFTP 1241
Query: 209 GSLKGTPV-LGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYN 267
S K P T+ L QTY + K F +I P+ HS+ P LHN ++ +N
Sbjct: 1242 ISHKLLPNDEEFLTIGELNQTY-FDIGGFTAKKFWVIGSPIEHSRSPNLHNAGYKALNLP 1300
Query: 268 GIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRR 326
+ D+ + + PDF G ++ P K +MKF ++ A+ I AVNT+I
Sbjct: 1301 YQFGRFEATDVDVVYDNLINKPDFGGLAITMPLKLDIMKFATKLSDAAETIGAVNTLI-- 1358
Query: 327 PSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
P +G G NTD I ++ G ++S G ++ GAGG RA +
Sbjct: 1359 PIEGGYFGDNTDW----VGISNSFIRAGVPPKSSSNG--------LVVGAGGTSRAAIYA 1406
Query: 387 AKSRG 391
G
Sbjct: 1407 LHQMG 1411
>gi|68466283|ref|XP_722916.1| hypothetical protein CaO19.12175 [Candida albicans SC5314]
gi|46444923|gb|EAL04195.1| hypothetical protein CaO19.12175 [Candida albicans SC5314]
Length = 1551
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 163/365 (44%), Gaps = 29/365 (7%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
GAD VE+R+D + + +I LP++ R GG + + L++L
Sbjct: 1067 GADAVELRVDLFKDTSAEFVAAQIAVIRKHADLPIIYTVRTMSQGGKFPDENVDELKSLL 1126
Query: 93 L-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC-NLDCETPSEE-DLGYLVSRM 149
L LG YVD +L A N L ++ SS + TR I + +++ E + ++
Sbjct: 1127 LLGIRLGVAYVDLQL-TAPNELIEEISSKKGFTRVIGTYQDINGELKWNNVEWKNKYNQG 1185
Query: 150 QATGADIIKLVFSVNDITEIARIFQLLSHCQV-PIIAYSVGERGLVSQLLSPKFNGALVY 208
+ ADI++LV N I + + + P+IA+++G +G +SQ+L NG
Sbjct: 1186 VSMNADIVRLVGKANSIQDNLDLENFKKQNTLKPLIAFNLGSQGKLSQVL----NGTFTP 1241
Query: 209 GSLKGTPV-LGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYN 267
S K P T+ L QTY + K F +I P+ HS+ P LHN ++ +N
Sbjct: 1242 ISHKLLPNDEEFLTIGELNQTY-FDIGGFTAKKFWVIGSPIEHSRSPNLHNAGYKALNLP 1300
Query: 268 GIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRR 326
+ D+ + + PDF G ++ P K +MKF ++ A+ I AVNT+I
Sbjct: 1301 YQFGRFEATDVDVVYDNLINKPDFGGLAITMPLKLDIMKFATKLSDAAETIGAVNTLI-- 1358
Query: 327 PSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
P +G G NTD I ++ G ++S G ++ GAGG RA +
Sbjct: 1359 PIEGGYFGDNTDW----VGISNSFIRAGVPPKSSSNG--------LVVGAGGTSRAAIYA 1406
Query: 387 AKSRG 391
G
Sbjct: 1407 LHQMG 1411
>gi|374295740|ref|YP_005045931.1| shikimate dehydrogenase [Clostridium clariflavum DSM 19732]
gi|359825234|gb|AEV68007.1| shikimate dehydrogenase [Clostridium clariflavum DSM 19732]
Length = 293
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 16/162 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
+ TK+ GLI PV HS P LHN + + + IYVP+ VD DL+ + +F
Sbjct: 7 VTGKTKLLGLIGNPVEHSISPQLHNSLSKILGLDLIYVPLRVDKEDLETLVKALKATEFV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V PYK +MKF D A + +VNT+ + DG+L GYNTD E + A ++A
Sbjct: 67 GFNVTVPYKREIMKFLDGNTKEAILMGSVNTV--KKIDGRLYGYNTDGEGFLRAFKEAA- 123
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
G+ G+ V+ GAGGA R +A GA
Sbjct: 124 -----------GTDFKGKKVVMLGAGGAARPIAVKIALEGAE 154
>gi|42527148|ref|NP_972246.1| 3-dehydroquinate dehydratase [Treponema denticola ATCC 35405]
gi|449111792|ref|ZP_21748361.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33521]
gi|449113401|ref|ZP_21749906.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 35404]
gi|41817572|gb|AAS12157.1| 3-dehydroquinate dehydratase, type 1, putative/shikimate
5-dehydrogenase, putative [Treponema denticola ATCC
35405]
gi|448957063|gb|EMB37816.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33521]
gi|448959611|gb|EMB40330.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 35404]
Length = 493
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 170/365 (46%), Gaps = 29/365 (7%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRLE------ALHLAEDL-GADYVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ A A+ + Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFANADPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQLLSHC 179
+ I S L + P + ++ V + DI KL F+ +ND++E+ + +L+ +
Sbjct: 118 DIKIIRS--LHSKVPVK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKNQ 174
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
+ I +G GL S++LS K N +VY K L E+L + Y I
Sbjct: 175 EY--ILSVMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQELIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLV--SENKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 353 -RGYK 356
R YK
Sbjct: 351 LRKYK 355
>gi|150864974|ref|XP_001384008.2| hypothetical protein PICST_89141 [Scheffersomyces stipitis CBS 6054]
gi|327507745|sp|A3LSZ2.2|ARO1_PICST RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|149386230|gb|ABN65979.2| pentafunctional arom polypeptide, shikimate 5-dehydrogenase
[Scheffersomyces stipitis CBS 6054]
Length = 1571
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 150/327 (45%), Gaps = 36/327 (11%)
Query: 34 AEGADVVEIRLDCINNFQPG--KDLEIILTKKP-LPVLIVYRPKWAGGLYEGDEHKRLEA 90
+ G+D +E+R+D + D IL K LP++ R + GG + ++ + LE
Sbjct: 1075 STGSDAIELRVDLLKETTHTFVADQTAILRKSTNLPIIYTIRTESQGGKFPDNKFEELEE 1134
Query: 91 LHLAE-DLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
L LG Y+D +L + +++L + S + I++ +D D +R
Sbjct: 1135 LLALGIKLGVQYLDLQLDLPNDLLERILESKKFTK--IIASYVDVSGSLRWDNVEWKNRY 1192
Query: 150 Q---ATGADIIKLVFSVNDITE--IARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
+ GAD++KLV N + +F+ S + P+IAY+VGE+G +S++L+P+
Sbjct: 1193 NQGVSLGADLVKLVGRANSFQDNLSLEVFRGTSTLK-PLIAYNVGEKGKLSRVLNPRL-- 1249
Query: 205 ALVYGSLKGTPVL--GLPTVESLRQTYKVEHINA--------DTKVFGLISKPVGHSKGP 254
TPV +P V IN K F ++ PVGHS+ P
Sbjct: 1250 ---------TPVTHAKIPAESGNEGALDVAQINKAYTDIGGLSEKHFWIVGNPVGHSRSP 1300
Query: 255 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD--FAGFSVGFPYKEAVMKFCDEVHP 312
LHN ++ +N ++ D + F D F G +V P K +MK+ D++
Sbjct: 1301 NLHNAGYKKLNLPYVFDRFETSDAGEAFQKLIKEDKNFGGLAVTMPLKVDIMKYTDKLSD 1360
Query: 313 LAQAIAAVNTIIRRPSD-GKLIGYNTD 338
AQ I AVNT+I + GK +G NTD
Sbjct: 1361 SAQVIGAVNTVIELEGEQGKYLGENTD 1387
>gi|156034494|ref|XP_001585666.1| hypothetical protein SS1G_13550 [Sclerotinia sclerotiorum 1980]
gi|327507671|sp|A7F7H0.1|ARO1_SCLS1 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|154698953|gb|EDN98691.1| hypothetical protein SS1G_13550 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1576
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 164/375 (43%), Gaps = 29/375 (7%)
Query: 34 AEGADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGD 83
A G+D VE+R+D + N PG D + + + LPV+ R GG +
Sbjct: 1072 AVGSDAVEVRVDLLEDPSSTNGIPGTDFLSVQIAHLRSVVHLPVIFTVRTVSQGGRFPDA 1131
Query: 84 EHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
H+ L+ LA +G +Y+D E+ +L ++ + + +R I S + T S ++
Sbjct: 1132 AHEEALKLYKLAVKMGIEYIDLEIAFPDELL-QEVTEAKGFSRIIASHHDPQGTLSWKNG 1190
Query: 143 GYLVSRMQATG-ADIIKLVFSVNDITE---IARIFQLLSHCQ-VPIIAYSVGERGLVSQL 197
G+ +A DIIKLV S I + +A+ + ++ P+IA ++G G +S++
Sbjct: 1191 GWFQHYNRALQYGDIIKLVGSAKSIEDNFALAKFKKTMAAAHDTPLIAINMGVTGKLSRV 1250
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILH 257
L+ F + + SL G + +R T + K F L P+ S+ P LH
Sbjct: 1251 LN-GFMTPVSHPSLPFKAAPGQLSAAEIRSTLSTLG-EIEPKSFYLFGTPISQSRSPALH 1308
Query: 258 NPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317
N F+ Y + D + +PDF G SV P K ++ D V + I
Sbjct: 1309 NTLFKQTGLPHRYSRLETDRVADVQDVIRAPDFGGASVTIPLKLDIIPLLDSVTDAVKVI 1368
Query: 318 AAVNTIIRRPSD-GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGA 376
AVNTII P + +L+G NTD ++ A + + SP ++ GA
Sbjct: 1369 GAVNTIIPTPDNPPRLVGENTDWLGMTHSLMSA------SHTPSPVDSPSPA---LVIGA 1419
Query: 377 GGAGRALAFGAKSRG 391
GG RA + S G
Sbjct: 1420 GGTARAAIYALHSLG 1434
>gi|410076270|ref|XP_003955717.1| hypothetical protein KAFR_0B02850 [Kazachstania africana CBS 2517]
gi|372462300|emb|CCF56582.1| hypothetical protein KAFR_0B02850 [Kazachstania africana CBS 2517]
Length = 1580
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 162/377 (42%), Gaps = 38/377 (10%)
Query: 36 GADVVEIRLDCINNFQPG---KDLEII-LTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G D VE+R+D + +P + L + L LP++ R + GG + D H+ L L
Sbjct: 1090 GCDAVEVRVDHLAKLEPDYVIRQLSTLRLATDGLPIIFTLRTRKQGGQFADDSHELLLDL 1149
Query: 92 HLAED-LGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQ 150
G ++VD EL + ++I K +S G I+ + D + D +R
Sbjct: 1150 FKLALRAGVEFVDLELSLPTDIQYKILNS--KGNTKIIGSHHDFDGVHPWDDSEWENRYN 1207
Query: 151 ---ATGADIIKLV---FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
+ D+IK V S D + R SH P+IA ++GE G VS++L+
Sbjct: 1208 QALSLDVDVIKFVGTAKSFEDNLTLERFRH--SHKAKPMIAINMGELGKVSRVLNTILT- 1264
Query: 205 ALVYGSLKGTPVLGLPTVESLRQTY-KVEHINADTKVFGLISKPVGHSKGPILHNPTFRH 263
+ L T G T+ + Q Y + I A K F ++ KPVGHS+ PILHN ++
Sbjct: 1265 PITSDLLPNTAAPGQLTIAQINQVYASMGGITA--KNFYVVGKPVGHSRSPILHNTGYKV 1322
Query: 264 VNYNGIYVPMFVD---DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAV 320
+ + D ++K+ G +V P K +MK+ DE+ A+ I AV
Sbjct: 1323 LGLPHKFDKYETDSAEEVKEKIIDAQRGKLGGLAVTIPLKLDIMKYLDEISAPAKVIGAV 1382
Query: 321 NTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP--LAGRMFVLAGAGG 378
NT+ +G L G NTD G N S G P ++G ++ GAGG
Sbjct: 1383 NTVTPL-ENGTLKGDNTDW-------------LGITNALLSNGVPDHVSGHAGLVVGAGG 1428
Query: 379 AGRALAFGAKSRGARVV 395
RA + G +
Sbjct: 1429 TSRAAVYALHRLGCEKI 1445
>gi|449304879|gb|EMD00886.1| hypothetical protein BAUCODRAFT_187934 [Baudoinia compniacensis UAMH
10762]
Length = 1625
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 162/385 (42%), Gaps = 45/385 (11%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G D VE+R D + ++ P ++ + ++ + LP++ R GG Y +E
Sbjct: 1106 GVDAVELRADLLVDRRSSDGMPSEEFLIDQVALLRSNTTLPLIFTLRSTSQGGRYPIEE- 1164
Query: 86 KRLEALHL---AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN-----LDCETP 137
K EAL L A +G D+VD EL I K +H+ I S + L
Sbjct: 1165 KTAEALRLYRVALRMGFDFVDLELTAPEQI-KKFVLAHRKMCNIIASHHDPRGQLSWADG 1223
Query: 138 SEEDLGYLVSRMQATGADIIKLVFSV-----NDITEIARIFQLLSHCQVPIIAYSVGERG 192
+E+ + + + DI+KLV ND ++ + +P IA ++GE G
Sbjct: 1224 AEDWIPHF--EQARSFGDIVKLVGVAKSSKDNDDLKVFKSKVRNDDSDLPFIAMNMGEIG 1281
Query: 193 LVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVG 249
+S++ NG + S P P + +RQ + + T+ F L KP+
Sbjct: 1282 KMSRVT----NGFMTPVSHPALPTKAAPEQLSATEIRQVLGIVGAISKTQFF-LFGKPIS 1336
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
S+ P LHN F Y D +K S S DF G SV P K VM D
Sbjct: 1337 QSRSPALHNTLFAATGLPHEYRLHETDRVKDIESVIRSADFGGGSVTIPLKLDVMPLLDH 1396
Query: 310 VHPLAQAIAAVNTII-RRPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
V A+ I AVNTI+ +DG L+GYNTD + + ++ A G K +
Sbjct: 1397 VDDAARTIGAVNTIVPTETADGSMALVGYNTDWQGMVISLRKA----GVKGNASPTAQQQ 1452
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRG 391
AG ++ G GG RA + K G
Sbjct: 1453 AG---MVVGGGGTARAAIYALKEMG 1474
>gi|361131659|gb|EHL03311.1| putative Pentafunctional AROM polypeptide [Glarea lozoyensis 74030]
Length = 1393
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 171/381 (44%), Gaps = 40/381 (10%)
Query: 34 AEGADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGD 83
A G+D +EIR+D + N P D + + + PLP++ R GG + D
Sbjct: 874 AVGSDAIEIRVDLLKDPKSTNGIPSIDFLSVQIAHLRSVVPLPLIFTVRTVSQGGKFPDD 933
Query: 84 EHKRLEALHL---AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEE 140
+ EAL L A +G +Y+D E+ + +L +S + ++ I S + S +
Sbjct: 934 AQE--EALKLYKAAVRMGLEYIDLEITLPDEVL-DSVTSAKGFSKIIASHHDPRGQLSWK 990
Query: 141 DLGYLVSRMQATG-ADIIKLVFS---VNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVS 195
+ G++ +A DI+KLV S + D +A ++ +P+IA ++G +G +S
Sbjct: 991 NGGWVQYYNRALQYGDIVKLVGSAKCMEDNFALANFKATVAKSHNIPLIAINMGVQGKLS 1050
Query: 196 QLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSK 252
++L NG + S P P + +RQ+ + + K F L KP+ S+
Sbjct: 1051 RVL----NGFMTPVSHPALPFKAAPGQLSAAEIRQSLSLLG-EIEPKQFYLFGKPISESR 1105
Query: 253 GPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312
P LHN F+ Y + D SPDF G SV P K ++ D V
Sbjct: 1106 SPALHNTLFQQTGLPHNYSRLETDVAADVKEIIRSPDFGGASVTIPLKLDIIPLLDGVSE 1165
Query: 313 LAQAIAAVNTIIRRPSDG--KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 370
A+ I AVNTI+ PS +LIG NTD + ++ Y T + G P +G
Sbjct: 1166 AAKLIGAVNTIVPIPSKDSMRLIGENTDW----LGMTHSLIAHNYS--TVASGPPGSG-- 1217
Query: 371 FVLAGAGGAGRALAFGAKSRG 391
++ GAGG RA + +S G
Sbjct: 1218 -LVIGAGGTSRAAVYALRSLG 1237
>gi|353240388|emb|CCA72260.1| probable ARO1-Pentafunctional AROM polypeptide [Piriformospora indica
DSM 11827]
Length = 1615
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 178/402 (44%), Gaps = 58/402 (14%)
Query: 36 GADVVEIRLDCINNF----QPG--------KDLEIILTKKPLPVLIVYRPKWAGGLYEGD 83
G D VE+R+D ++ QP + L + LPV+ R GG +
Sbjct: 1114 GIDAVELRVDLLSPHGAAKQPNVPPREYVIQQLAWLKHITNLPVVYTVRTIAQGGAFPDK 1173
Query: 84 EHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
H+ L AL L +G +Y+D E + + + ++ ++ + ++ I S + DL
Sbjct: 1174 AHEELFALLELGIQMGTEYIDVETTLPHSKI-RKLAARKGASKLIASYH-----DWSGDL 1227
Query: 143 GYLVSRMQA------TGADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVGER 191
+ + ++A + DI+K+V N + E + + PIIA ++GE+
Sbjct: 1228 RWFGTEIEAIHTTASSLGDIVKIVGKANSLEENMELRSFTKSVKKANQSKPIIAINLGEQ 1287
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVG 249
G +S++L+ F + + L PV P S Q H+ K F L P+
Sbjct: 1288 GQLSRILNETFT-PVTHSQL---PVAAAPGQLSFSQIQSGLHLLGQLPAKRFYLFGNPIS 1343
Query: 250 HSKGPILHNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
S P LHN F HV ++ ++ VD+ + S SP F G SV P+K +M+
Sbjct: 1344 KSPSPTLHNSGF-HVLGLPHHYELHQTETVDESVR--SIIRSPTFGGASVTIPHKLTIME 1400
Query: 306 FCDEVHPLAQAIAAVNTIIR-RPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTASF 362
DE+ P A+ I AVNT+I +DGK L+G NTD + I +++ R TA
Sbjct: 1401 ALDELSPAAKLIGAVNTVIPVEQADGKTILLGDNTDWQ----GIRNSVLSRSACRWTAQ- 1455
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFGT 403
++ GAGG RA + G R+++++ + +
Sbjct: 1456 ------DTGLIIGAGGTARAAVYALNQLGVGRILLWNRTYSS 1491
>gi|358372010|dbj|GAA88616.1| pentafunctional polypeptide [Aspergillus kawachii IFO 4308]
Length = 1586
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 171/393 (43%), Gaps = 50/393 (12%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQPGKD----------LEIILTKKPLPVLIVYRPKWA 76
S++ + G+D VE+R+D + + D L + + LPV+ R K
Sbjct: 1066 SDILKKVCVGSDAVELRVDLLEDPTMDGDIPSVDYVAEQLSFLRSHVTLPVIYTIRTKSQ 1125
Query: 77 GGLYEGDEH-KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + D H + LE LA G ++VD E+ +L + + Q G I++ + D +
Sbjct: 1126 GGRFPDDAHAEALELYRLAFRSGLEFVDLEIAFPDEML--RTVTEQKGYSRIIASHHDPK 1183
Query: 136 TP-SEEDLGYLVSRMQATG-ADIIKLVFSVNDITE--IARIFQ--LLSHCQVPIIAYSVG 189
S ++ + +A D+IKLV ++ + R F+ S VP+IA ++G
Sbjct: 1184 GELSWSNMSWTKYYNRALEYGDVIKLVGVAKNLDDNNALRNFKNWAASAHDVPLIAINMG 1243
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT--KVFGLISKP 247
+ G +S++L NG + S P P S + + + + K F + P
Sbjct: 1244 DNGQLSRIL----NGFMTPVSHPSLPFKAAPGQLSAAEIRRGLSLMGEIQPKKFAIFGTP 1299
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
+ S+ P LHN F Y + +D+K F SP+F G SV P K +M
Sbjct: 1300 ISQSRSPALHNTLFAQSGLPHEYSRLETANAEDVKDFIR---SPNFGGASVTIPLKLDIM 1356
Query: 305 KFCDEVHPLAQAIAAVNTIIR----RPSDGKLIGYNTDCEASITAIEDAIKERGYK--NG 358
DE+ P A+ I AVNTI+ + +L+GYNTD + ++ +A G NG
Sbjct: 1357 PLLDEIAPDAEIIGAVNTIVPVSQGKGQPARLVGYNTDWQGMTLSLRNA----GVYGCNG 1412
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
AS V+ G GG RA + + G
Sbjct: 1413 DAS---------AVVVGGGGTARAAIYSLHNMG 1436
>gi|18978065|ref|NP_579422.1| shikimate 5-dehydrogenase [Pyrococcus furiosus DSM 3638]
gi|397652658|ref|YP_006493239.1| shikimate 5-dehydrogenase [Pyrococcus furiosus COM1]
gi|24211503|sp|Q8U0A6.1|AROE_PYRFU RecName: Full=Shikimate dehydrogenase
gi|18893854|gb|AAL81817.1| shikimate 5-dehydrogenase [Pyrococcus furiosus DSM 3638]
gi|393190249|gb|AFN04947.1| shikimate 5-dehydrogenase [Pyrococcus furiosus COM1]
Length = 271
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV-DDLKKFFSTYSSPDFAG 292
IN +TK++G+I PV HS PI+HN F+ N IYVP V DLK + + D G
Sbjct: 2 INGETKIYGIIGNPVKHSLSPIMHNALFKKFGINAIYVPFEVKKDLKNAINGVKALDIQG 61
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+V PYKE V+KF DE+ +Q I +VNT++ +GKL+GY TD + A+E
Sbjct: 62 VNVTMPYKEEVIKFLDELSEDSQNIGSVNTVVN--LEGKLVGYTTDGIGARRALE 114
>gi|327507653|sp|B0XRM8.1|ARO1_ASPFC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|159131499|gb|EDP56612.1| pentafunctional polypeptide (AroM), putative [Aspergillus fumigatus
A1163]
Length = 1605
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 46/382 (12%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + +N P D + + ++ LPV+ R K GG + D H
Sbjct: 1074 GSDAVELRVDLLEDPDSSNGIPTVDFVADQISYLRSRITLPVIFTIRTKGQGGRFPDDAH 1133
Query: 86 -KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+ ++ LA G ++VD E+ +L + + + ++ I S + S ++ +
Sbjct: 1134 AEAMQLYRLAVRSGCEFVDLEIAFPDEML-RAVTEMKGYSKIIASHHDPNGELSWANMSW 1192
Query: 145 LVSRMQATG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLS 199
+ +A D+IKLV +++D T + + VP+IA ++G G +S++L
Sbjct: 1193 MKYYNRALEYGDVIKLVGVARNLDDNTALRKFKNWAEEAHDVPLIAINMGGNGQLSRIL- 1251
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPILH 257
NG + S P P S K + + K F L P+ S+ P LH
Sbjct: 1252 ---NGFMTPVSHPALPFRAAPGQLSATDIRKGLSLMGEIKKKRFALFGSPISESRSPALH 1308
Query: 258 NPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
N F + Y + V+D+K F +PDF G SV P K +M DE+ A
Sbjct: 1309 NTLFAEMGLPHEYTRLETANVEDVKDFIR---APDFGGASVTIPLKLDIMPLLDEITAEA 1365
Query: 315 QAIAAVNTIIRRPSDG-----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ I AVNT++ SDG +L+G+NTD + + + +A ++G+ +
Sbjct: 1366 EIIGAVNTVVPV-SDGEGKPQRLVGHNTDWQGMVQCLRNA----------GAYGADGSAS 1414
Query: 370 MFVLAGAGGAGRALAFGAKSRG 391
V+ G GG RA + G
Sbjct: 1415 ALVV-GGGGTSRAAIYALHQMG 1435
>gi|44889967|emb|CAD29607.2| pentafunctional arom polypeptide [includes: 3-dehydroquinate
synthase], putative [Aspergillus fumigatus]
Length = 1582
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 46/382 (12%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + +N P D + + ++ LPV+ R K GG + D H
Sbjct: 1074 GSDAVELRVDLLEDPDSSNGIPTVDFVADQISYLRSRITLPVIFTIRTKGQGGRFPDDAH 1133
Query: 86 -KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+ ++ LA G ++VD E+ +L + + + ++ I S + S ++ +
Sbjct: 1134 AEAMQLYRLAVRSGCEFVDLEIAFPDEML-RAVTEMKGYSKIIASHHDPNGELSWANMSW 1192
Query: 145 LVSRMQATG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLS 199
+ +A D+IKLV +++D T + + VP+IA ++G G +S++L
Sbjct: 1193 MKYYNRALEYGDVIKLVGVARNLDDNTALRKFKNWAEEAHDVPLIAINMGGNGQLSRIL- 1251
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPILH 257
NG + S P P S K + + K F L P+ S+ P LH
Sbjct: 1252 ---NGFMTPVSHPALPFRAAPGQLSATDIRKGLSLMGEIKKKRFALFGSPISESRSPALH 1308
Query: 258 NPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
N F + Y + V+D+K F +PDF G SV P K +M DE+ A
Sbjct: 1309 NTLFAEMGLPHEYTRLETANVEDVKDFIR---APDFGGASVTIPLKLDIMPLLDEITAEA 1365
Query: 315 QAIAAVNTIIRRPSDG-----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ I AVNT++ SDG +L+G+NTD + + + +A ++G+ +
Sbjct: 1366 EIIGAVNTVVPV-SDGEGKPQRLVGHNTDWQGMVQCLRNA----------GAYGADGSAS 1414
Query: 370 MFVLAGAGGAGRALAFGAKSRG 391
V+ G GG RA + G
Sbjct: 1415 ALVV-GGGGTSRAAIYALHQMG 1435
>gi|70995978|ref|XP_752744.1| pentafunctional polypeptide (AroM) [Aspergillus fumigatus Af293]
gi|74672371|sp|Q4WS76.1|ARO1_ASPFU RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|66850379|gb|EAL90706.1| pentafunctional polypeptide (AroM), putative [Aspergillus fumigatus
Af293]
Length = 1605
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 46/382 (12%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + +N P D + + ++ LPV+ R K GG + D H
Sbjct: 1074 GSDAVELRVDLLEDPDSSNGIPTVDFVADQISYLRSRITLPVIFTIRTKGQGGRFPDDAH 1133
Query: 86 -KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+ ++ LA G ++VD E+ +L + + + ++ I S + S ++ +
Sbjct: 1134 AEAMQLYRLAVRSGCEFVDLEIAFPDEML-RAVTEMKGYSKIIASHHDPNGELSWANMSW 1192
Query: 145 LVSRMQATG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLS 199
+ +A D+IKLV +++D T + + VP+IA ++G G +S++L
Sbjct: 1193 MKYYNRALEYGDVIKLVGVARNLDDNTALRKFKNWAEEAHDVPLIAINMGGNGQLSRIL- 1251
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPILH 257
NG + S P P S K + + K F L P+ S+ P LH
Sbjct: 1252 ---NGFMTPVSHPALPFRAAPGQLSATDIRKGLSLMGEIKKKRFALFGSPISESRSPALH 1308
Query: 258 NPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
N F + Y + V+D+K F +PDF G SV P K +M DE+ A
Sbjct: 1309 NTLFAEMGLPHEYTRLETANVEDVKDFIR---APDFGGASVTIPLKLDIMPLLDEITAEA 1365
Query: 315 QAIAAVNTIIRRPSDG-----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ I AVNT++ SDG +L+G+NTD + + + +A ++G+ +
Sbjct: 1366 EIIGAVNTVVPV-SDGEGKPQRLVGHNTDWQGMVQCLRNA----------GAYGADGSAS 1414
Query: 370 MFVLAGAGGAGRALAFGAKSRG 391
V+ G GG RA + G
Sbjct: 1415 ALVV-GGGGTSRAAIYALHQMG 1435
>gi|332298817|ref|YP_004440739.1| 3-dehydroquinate dehydratase [Treponema brennaborense DSM 12168]
gi|332181920|gb|AEE17608.1| 3-dehydroquinate dehydratase [Treponema brennaborense DSM 12168]
Length = 501
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 182/404 (45%), Gaps = 43/404 (10%)
Query: 13 ICAPLMAQSVEQVLS--NMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LP 66
IC L ++ + L+ N Y+ + D+ E+R+D + KD + + P LP
Sbjct: 10 ICLCLTGNTLAEDLAILNTYR---KWIDMAELRVDYLE-----KDERLQIRHFPAMAGLP 61
Query: 67 VLIVYRPKWAGGLY-EGDEHKRL---EALHLAED---LGADYVDFELKVASNILGKQYSS 119
++ R K GG + EG+ + + L AE Y+DFE ++ Q ++
Sbjct: 62 CILTIRRKIDGGQFLEGEASRTMLFARGLAFAEQDTRKNFAYIDFEEDF--HVPSLQDAA 119
Query: 120 HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIF-QLLSH 178
TR I S + D E P ++ +++M+ TG +I KL + ++++ +F + S
Sbjct: 120 LAFETRIIRSAH-DMENPVY-NICERLAKMRTTGFEIPKLACMPHSLSDVTHMFAEAASL 177
Query: 179 CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLK----GTPVLGLPTVESLRQTYKVEHI 234
I ++G GL S++L+ + + L Y S K G +G +L + Y I
Sbjct: 178 ADSEHILCAMGPLGLPSRILAGRLHSFLTYTSPKEPTGGMQQIGHIDPVTLNEIYNFRAI 237
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+A+TK++G+ P+ + P +HN +R N YVP+ + + + G S
Sbjct: 238 DANTKLYGITGYPLAATDSPRIHNEGYRKHGMNAAYVPVRAATVSEALEFAAETGIQGLS 297
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+KE V+++ +V I A NTI+R SD GYNTD A+ D + +
Sbjct: 298 VTIPHKEKVLEYLPQVSAEVGEIDACNTIVRTESD--WFGYNTDAYGLSRAVCDFMNVKN 355
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
LA + G+GGA +A AF K + IF+
Sbjct: 356 -----------LAHCKVAIIGSGGAAKAAAFAVKQLRGKACIFN 388
>gi|51246865|ref|YP_066749.1| 3-dehydroquinate dehydratase [Desulfotalea psychrophila LSv54]
gi|81641058|sp|Q6AIT8.1|AROD_DESPS RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|50877902|emb|CAG37742.1| related to 3-dehydroquinate dehydratase [Desulfotalea psychrophila
LSv54]
Length = 226
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 111/218 (50%), Gaps = 18/218 (8%)
Query: 16 PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKW 75
P M Q++E L + GADV+E+RLD I+ + +E + T +L RP W
Sbjct: 13 PTMPQALEASL------RIFGADVIEVRLDYIDVPEIDPFVESLATD----LLFTCRPTW 62
Query: 76 AGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA--SNILGKQYSSHQSGTRFIVSCNLD 133
GGL+ G E RL L A GA Y+D EL+ A S+ + Y + + T I+S +
Sbjct: 63 EGGLFAGTEEDRLALLAEAVRAGAAYIDLELRSAEESHQYLRTYLAERE-TELILSYHDF 121
Query: 134 CETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSVGE 190
T + L ++ +MQ GADI KL+ + N ++ R+FQ+L + +P+IA+ +GE
Sbjct: 122 ESTATLAKLTGIIDQMQDAGADIGKLITTANSAADVVRVFQVLEYAAKKGLPLIAFCMGE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLR 226
G VS++ S G + Y G V G T+ +R
Sbjct: 182 AGAVSRVASCDLGGYMTYCCADGAEVTAAGQITISEMR 219
>gi|229086905|ref|ZP_04219064.1| Shikimate dehydrogenase [Bacillus cereus Rock3-44]
gi|228696415|gb|EEL49241.1| Shikimate dehydrogenase [Bacillus cereus Rock3-44]
Length = 277
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F + + + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFENCSIDAHYHAFLVEEMALGEAVKGLKALGVSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++MK+ DE+ PLA+ I AVNT+++R D KLIGYNTD + +++ K+
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVQR--DEKLIGYNTDGIGYVRSLQSISKD---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
PL + +L GAGGA RA+ F G + +
Sbjct: 117 --------PLDQKRILLLGAGGACRAIYFSLADAGVKEI 147
>gi|320582025|gb|EFW96244.1| Pentafunctional arom protein [Ogataea parapolymorpha DL-1]
Length = 1739
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 32/372 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLY-EGDEHKRLEAL 91
G D VE+R+D + ++ + + ++ LP++ R GG + +GD K E
Sbjct: 1070 GCDAVELRVDLLKSYDVTDVSEQVGLLRNHTSLPIVFTVRSVSQGGKFPDGDYDKVQELC 1129
Query: 92 HLAEDLGADYVDFELKVASNIL----GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 147
LA LG ++D EL + +L K+ + G+ + ++ E L +
Sbjct: 1130 ELAFKLGVGFLDLELSLPEGLLDTLCSKRRFTKIIGSHHDFAGAFKWDSAEWESKYLLAT 1189
Query: 148 RMQATGADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGAL 206
R+ D++K V + + + Q SH + P+IA ++G+ G S++++P L
Sbjct: 1190 RLNV---DVVKFVGMAKEYKDNYLLEQFRESHTERPLIAINMGQYGQYSRVVNP----VL 1242
Query: 207 VYGSLKGTPVLGLPTVESLRQTYKVEH-INADT-KVFGLISKPVGHSKGPILHNPTFRHV 264
+ + P P S++Q ++ I +T K F ++ +P+GHS+ P LH +
Sbjct: 1243 TPVTHERLPNASAPGQLSIKQIFQARSLIGLETPKHFCIVGEPIGHSRSPALHQAAYEVF 1302
Query: 265 NYNGIYVPMFVDDLKKFFS-TYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 323
+ D + S P+F G ++ P K +MK+ DE+ A+ I A+NT+
Sbjct: 1303 GLPHTFGKFETSDAQLVKEKVLSDPNFGGCAITIPLKVDMMKYADELSESAKTIGAINTL 1362
Query: 324 IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
I +GK G NTD I + NG S + G V+ GAGG RA
Sbjct: 1363 IPL-GNGKFRGDNTDWL--------GITQSFTNNGCT---SKITGNGLVI-GAGGTSRAA 1409
Query: 384 AFGAKSRGARVV 395
F G + +
Sbjct: 1410 VFALHQMGCQKI 1421
>gi|85077284|ref|XP_956000.1| pentafunctional AROM polypeptide [Neurospora crassa OR74A]
gi|74622647|sp|Q8X071.1|ARO1_NEUCR RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|18376380|emb|CAD21207.1| probable PENTAFUNCTIONAL AROM POLYPEPTIDE [Neurospora crassa]
gi|28917040|gb|EAA26764.1| pentafunctional AROM polypeptide [Neurospora crassa OR74A]
Length = 1563
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 164/362 (45%), Gaps = 31/362 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK-RLEAL 91
G+D VE+R+D + ++ P K + ++ + +P++ R GG + D+++ L+
Sbjct: 1070 GSDAVELRVDLLEDYDPEFVAKQVALLRSAARIPIVYTVRTVSQGGKFPDDDYELALKLY 1129
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE-TPSEEDLGYLVSRMQ 150
G +Y+D E+ + ++ + +++ G I++ + D + T S ++ G++ +
Sbjct: 1130 RTGLQAGVEYLDLEMTMPDEVI--EAVTNEKGYTHIIASHHDPKATLSWKNGGWIQYYNK 1187
Query: 151 A-TGADIIKLVFSVNDITE---IARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPKFNGA 205
A D++KLV ++ + +AR L+ P+IA ++G G +S++L NG
Sbjct: 1188 ALQHGDVVKLVGVARELADNFALARFKASLAAAHDKPLIALNMGAAGKLSRVL----NGF 1243
Query: 206 LVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFR 262
L S P P + +RQ + + + F L P+ S+ P LHN FR
Sbjct: 1244 LTPVSHPALPSKAAPGQLSAAEIRQALALIG-ELEPRSFHLFGNPISASRSPALHNALFR 1302
Query: 263 HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
Y D+ +P F G SV P K +M DEV A+ I AVNT
Sbjct: 1303 DNGLPHQYSLFETDNAADVKDLIRAPGFGGASVTIPLKLDIMPLLDEVSDAAKVIGAVNT 1362
Query: 323 II--RRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAG 380
II R L G NTD + A+ +A + K SP AG ++ GAGG
Sbjct: 1363 IIPVRNGDKVTLRGDNTDWMGMVYALRNAGVVKCTKE------SPTAG---MVVGAGGTT 1413
Query: 381 RA 382
RA
Sbjct: 1414 RA 1415
>gi|367035610|ref|XP_003667087.1| hypothetical protein MYCTH_2312474 [Myceliophthora thermophila ATCC
42464]
gi|347014360|gb|AEO61842.1| hypothetical protein MYCTH_2312474 [Myceliophthora thermophila ATCC
42464]
Length = 1576
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 166/371 (44%), Gaps = 31/371 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
G+D VE+R+D + ++ P + ++ + +P++ R GG + D+++ L+
Sbjct: 1072 GSDAVELRVDLLESYDPEFVAHQVALLRSVAKIPIVYTVRTVSQGGRFPDDDYELARRLY 1131
Query: 93 -LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
+ G +++D E+ + ++IL + + + TR I S + S + ++ +A
Sbjct: 1132 QIGLRTGVEFLDLEVTMPADIL-EAVTVSKGFTRIIASHHDPQSKLSWRNGSWIPFYNKA 1190
Query: 152 TG-ADIIKLVFSVNDITE----IARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGAL 206
D+IKLV +I++ + ++L+ PIIA ++G G +S++L+ F +
Sbjct: 1191 LQYGDVIKLVGMAGEISDNFALTSFKTKMLAAHDTPIIALNMGPAGKLSRVLN-GFMTPV 1249
Query: 207 VYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNY 266
+ L G + +RQ + + K F L KP+ S+ P LHN F
Sbjct: 1250 SHPDLPAKAAPGQLSATEIRQALALIG-ELEPKSFYLFGKPISSSRSPALHNTLFGATGL 1308
Query: 267 NGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRR 326
Y D +P F G SV P K ++ D++ A+AI AVNTII
Sbjct: 1309 PHHYSLFETDKASDVQDLIRAPHFGGASVTIPLKLDIVPLLDDISEAARAIGAVNTIIPI 1368
Query: 327 PSDGK------LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAG 380
PS K L+G NTD + A+ A G AS P AG ++ G+GG
Sbjct: 1369 PSAAKGDNKTTLLGDNTDWRGMVFALRSA--------GVAS--PPGAG---MVVGSGGTT 1415
Query: 381 RALAFGAKSRG 391
RA + S G
Sbjct: 1416 RAAIYALHSLG 1426
>gi|152976764|ref|YP_001376281.1| shikimate 5-dehydrogenase [Bacillus cytotoxicus NVH 391-98]
gi|189046305|sp|A7GT28.1|AROE_BACCN RecName: Full=Shikimate dehydrogenase
gi|152025516|gb|ABS23286.1| shikimate 5-dehydrogenase [Bacillus cytotoxicus NVH 391-98]
Length = 277
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V++ L + + +G +V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLGIDAHYHAFLVEEEMLGEAVKGLKALGVSGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+MK+ DE+ PLA+ I AVNT++ R +GKL+GYNTD + +++ KE
Sbjct: 63 TPHKVAIMKYLDEIDPLAKQIGAVNTVVHR--NGKLVGYNTDGIGYVRSLQAISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
PL + +L GAGGA RA+
Sbjct: 117 --------PLRHKRMLLLGAGGACRAI 135
>gi|348687600|gb|EGZ27414.1| pentafunctional aromatic amino acid protein [Phytophthora sojae]
Length = 1548
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 170/385 (44%), Gaps = 31/385 (8%)
Query: 35 EGADVVEIRLDCINNFQPGK----DLEIILTKKPLPVLIVYRPKWAGGLY-EGDEH--KR 87
+GAD +E+R+D + Q K + ++ + LP++ R K GG + +G+EH K
Sbjct: 1041 KGADALELRVDLLKYPQDTKFVASQVALLRSLSTLPIIFTVRSKGQGGAFPDGEEHEQKM 1100
Query: 88 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 147
E L L LG ++VD E S + +H+ + I S + + SE + + +
Sbjct: 1101 FELLQLGVRLGCEFVDVE-TCWSRKAREHLLAHRHRSAIISSFHAVQKPTSEAETTAIFN 1159
Query: 148 RMQATG-ADIIKLV---FSVND---ITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSP 200
+ G I+K+V +S D + +A+ F Q+PII+ E G ++++L+
Sbjct: 1160 ECYSRGNVQIVKVVVKAYSPQDALMVDRVAKDFAKAWQQQMPIISLCTTEAGKLTRMLNR 1219
Query: 201 KFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPT 260
+ + L G +VE + T + + + F L P+ S P +HN
Sbjct: 1220 TLT-PVTHPLLPAAAAPGQLSVEEI-MTLRKQLGLLPAREFFLFGSPIQKSPSPAMHNAG 1277
Query: 261 FRHVNYNGIYVPMFVD--DLKKFFSTYSSP--DFAGFSVGFPYKEAVMKFCDEVHPLAQA 316
F + ++ D D+ + +P F G SV P K +M+ DE+ P A+A
Sbjct: 1278 FESTSLASLFTYGLHDTADVVEIVQRMQAPGTTFGGGSVTIPLKVDIMEHLDELSPAAKA 1337
Query: 317 IAAVNTIIRRPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
I AVNTI+R +G G NTD + I + T S P A ++
Sbjct: 1338 IGAVNTIMREDRNGSPYWKGDNTDWLGILRPISKRL-------ATLSVRKPAAELTALVV 1390
Query: 375 GAGGAGRALAFGAKSRG-ARVVIFD 398
GAGG A ++ + G ++ IF+
Sbjct: 1391 GAGGTSMAASYAMRQLGVGKLFIFN 1415
>gi|424787497|ref|ZP_18214263.1| shikimate 5-dehydrogenase [Streptococcus intermedius BA1]
gi|422113792|gb|EKU17519.1| shikimate 5-dehydrogenase [Streptococcus intermedius BA1]
Length = 284
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 19/162 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+Y+ V DDLK D
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEVSKDDLKATVENIRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
+G+ SF + G+ ++ GAGGA A+ A GA
Sbjct: 109 --KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGA 146
>gi|396496869|ref|XP_003844839.1| similar to pentafunctional polypeptide AROM [Leptosphaeria maculans
JN3]
gi|312221420|emb|CBY01360.1| similar to pentafunctional polypeptide AROM [Leptosphaeria maculans
JN3]
Length = 1591
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 160/391 (40%), Gaps = 62/391 (15%)
Query: 36 GADVVEIRLDCI--NNFQPG--------KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
GAD VE+R+D + N Q G + L I+ T P++ R K GG + +
Sbjct: 1083 GADAVELRVDLLVDPNGQEGLPTPEYVIEQLTILRTVTTTPIIFTIRTKAQGGKFPDTAY 1142
Query: 86 KRLEALHL-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
AL+L A LG ++VD E+ ++ +IL + S G I++ + D ++ G
Sbjct: 1143 DEARALYLTALRLGCEFVDLEMTMSEDIL--REVSEGRGYTEIIASHHDPKSELNWSNGS 1200
Query: 145 LV---SRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
+ +R G +IKLV I + + + S VP+IA ++GE G +S++
Sbjct: 1201 WMKYYNRALQYGT-VIKLVGVAQSIKDNFALAEFKSWADTAHPVPLIAINMGEHGKLSRI 1259
Query: 198 LS--------PKFNGALVYGSLKGTPV-LGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
L+ P A G L + LGL + + TK F + PV
Sbjct: 1260 LNGFLTPVSHPLLPSATAPGQLSAADIRLGLSLMGEI-----------PTKKFFIFGSPV 1308
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P LHN FR +Y D +PDF G SV P K+ V D
Sbjct: 1309 SQSPSPRLHNRLFRETGLPHVYSRFETTDASSVRDIIRAPDFGGASVTIPLKQDVRTLLD 1368
Query: 309 EVHPLAQAIAAVNTIIRRPSDG--------KLIGYNTDCEASITAIEDAIKERGYKNGTA 360
V P +AI A+NTI+ S +LIG NTD I +++A +
Sbjct: 1369 GVGPEVEAIGALNTIVPETSIDETTGQEVTRLIGLNTDYLGMILVLKNA-------GALS 1421
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
GS L + G GG R + + G
Sbjct: 1422 QSGSAL------VIGGGGTSRGAIYALREMG 1446
>gi|159041378|ref|YP_001540630.1| shikimate dehydrogenase [Caldivirga maquilingensis IC-167]
gi|229488304|sp|A8MCY4.1|AROE_CALMQ RecName: Full=Shikimate dehydrogenase
gi|157920213|gb|ABW01640.1| Shikimate dehydrogenase substrate binding domain protein
[Caldivirga maquilingensis IC-167]
Length = 269
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 18/157 (11%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKF-FSTYSSPDFAGFSVGFP 298
VFGLI P+ ++ P +HN F+ + + YVP+ V + F +S +GF+V P
Sbjct: 3 VFGLIGYPLNYTLSPQIHNYVFKRLRIDAAYVPLRVASKRLLHFIEFSRDALSGFNVTIP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+K AV K DE++ A I +VNT++ S+ KLIGYNTD A+E+++ ERGYK
Sbjct: 63 HKVAVAKLIDELNDDADTIKSVNTVVN--SNQKLIGYNTD----YVAVEESLIERGYK-- 114
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G +L GAGGA RA+ G R +
Sbjct: 115 ---------GEEALLIGAGGAARAVVLALSKTGCRAI 142
>gi|319938856|ref|ZP_08013220.1| shikimate dehydrogenase [Streptococcus anginosus 1_2_62CV]
gi|319811906|gb|EFW08172.1| shikimate dehydrogenase [Streptococcus anginosus 1_2_62CV]
Length = 284
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 82/162 (50%), Gaps = 19/162 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DEV P AQ I AVNT++ + GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDEVTPAAQMIGAVNTVVNQ--HGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
+G+ SF + G+ V+ GAGGA A+ A GA
Sbjct: 109 -KGFFMSLPSF--VITGKKMVMLGAGGAATAIIIQAVLDGAE 147
>gi|74620637|sp|Q8J294.1|ARO1_THACU RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|25005077|gb|AAN70992.1|AF482690_1 arom polypeptide [Thanatephorus cucumeris]
Length = 1618
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 167/397 (42%), Gaps = 67/397 (16%)
Query: 36 GADVVEIRLDCINNFQPGKD----------LEIILTK-------KPLPVLIVYRPKWAGG 78
GAD +E+R+D +N P D L+ + T+ LPV+ R GG
Sbjct: 1115 GADAIELRVDLLN---PSGDPVTGPPNIPSLDFVATQLSALRHTSSLPVVFTVRTASQGG 1171
Query: 79 LYEGDEHKRLEALH-LAEDLGADYVDFEL----KVASNILGKQYSSHQSGTRFIVSCNLD 133
+ K AL+ LA G +Y+D E+ K ++ ++ +S + S N+
Sbjct: 1172 AFPDTAEKEAFALYNLALRHGVEYIDVEISWSDKKIQDLAARKGASQIIASWHDWSGNMK 1231
Query: 134 CETPSEEDLGYLVSRMQATGADIIKLV---FSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
++ L R+ DI+K+V S+ D + R F +H P I ++G
Sbjct: 1232 WNGAVVKEKYALAERV----GDIVKIVGKALSIEDNFAL-RAFAA-AHTSKPFIGINMGA 1285
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPV 248
G +S++L N A S P P S++ + H+N + F L P+
Sbjct: 1286 EGQLSRVL----NTAFTPVSHPLLPTRAAPGQMSVQDIHTALHLNGQLAPQKFYLFGSPI 1341
Query: 249 GHSKGPILHNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
HS P LHN F + Y+ D++K + +P+F G SV P K ++
Sbjct: 1342 AHSMSPHLHNTGFEKLGLPHKYHIFETATITDEVK---AVIRAPEFGGASVTIPLKLDII 1398
Query: 305 KFCDEVHPLAQAIAAVNTII-RRPSDG--KLIGYNTDCEASITAIEDAIKER---GYKNG 358
DEV P A+AI AVNTII R+ +DG L G NTD AI D + G N
Sbjct: 1399 PLLDEVSPEAKAIGAVNTIIPRKRADGSTSLFGTNTDWR----AIHDLARNNLVVGITNE 1454
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
T + + GAGG RA + + G + +
Sbjct: 1455 TTAL----------VLGAGGTARAALYAIHALGIKTI 1481
>gi|392428507|ref|YP_006469518.1| shikimate dehydrogenase [Streptococcus intermedius JTH08]
gi|419777500|ref|ZP_14303412.1| shikimate dehydrogenase [Streptococcus intermedius SK54]
gi|383844980|gb|EID82390.1| shikimate dehydrogenase [Streptococcus intermedius SK54]
gi|391757653|dbj|BAM23270.1| shikimate dehydrogenase [Streptococcus intermedius JTH08]
Length = 284
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 19/162 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+Y+ + DDLK D
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISKDDLKATVENIRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
+G+ SF + G+ ++ GAGGA A+ A GA
Sbjct: 109 --KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGA 146
>gi|124360139|gb|ABN08155.1| Dehydroquinase class I [Medicago truncatula]
Length = 96
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 21/98 (21%)
Query: 149 MQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVY 208
MQATG DIIKLV P+IAYS+GE GL+SQ L PKF G V
Sbjct: 1 MQATGTDIIKLV---------------------PLIAYSIGESGLISQFLCPKFGGFFVC 39
Query: 209 GSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK 246
GSL P+ GLP++ SL++ YK+EH+NA+T+VFGLIS
Sbjct: 40 GSLARNPIPGLPSLHSLQEAYKLEHVNANTEVFGLISS 77
>gi|322517131|ref|ZP_08070015.1| shikimate dehydrogenase [Streptococcus vestibularis ATCC 49124]
gi|322124281|gb|EFX95792.1| shikimate dehydrogenase [Streptococcus vestibularis ATCC 49124]
Length = 285
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + D
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQINGVYVAWEIPESDLAETVKNIRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG+LIG+NTD ++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGRLIGHNTDGFGFFASLKNF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
SP R+ +L GAGGA +A+ A GA+ V
Sbjct: 119 -------------SPKDARLMIL-GAGGAAKAIVTQAVLDGAKKV 149
>gi|335031420|ref|ZP_08524859.1| putative shikimate dehydrogenase [Streptococcus anginosus SK52 =
DSM 20563]
gi|333769670|gb|EGL46768.1| putative shikimate dehydrogenase [Streptococcus anginosus SK52 =
DSM 20563]
Length = 261
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 19/162 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DEV P AQ I A+NT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDEVTPAAQMIGALNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
+G+ SF + G+ V+ GAGGA A+ A GA
Sbjct: 109 -KGFFMSLPSF--VITGKKLVMLGAGGAATAIIVQAVLDGAE 147
>gi|317031083|ref|XP_001392796.2| shikimate dehydrogenase [Aspergillus niger CBS 513.88]
Length = 1270
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 155/350 (44%), Gaps = 37/350 (10%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQPGKD----------LEIILTKKPLPVLIVYRPKWA 76
S++ + G+D VE+R+D + + D L + + LPV+ R K
Sbjct: 750 SDILKKVCVGSDAVELRVDLLEDPTMDGDIPSVDYVAEQLSFLRSHITLPVIYTIRTKSQ 809
Query: 77 GGLYEGDEH-KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + D H + LE LA G ++VD E+ +L + + Q G I++ + D +
Sbjct: 810 GGRFPDDAHAEALELYRLAFRSGLEFVDLEIAFPDEML--RTVTEQKGYSRIIASHHDPK 867
Query: 136 ---TPSEEDLGYLVSRMQATGADIIKLVFSVNDITE--IARIFQ--LLSHCQVPIIAYSV 188
+ S +R G D+IKLV ++ + R F+ S VP+IA ++
Sbjct: 868 GELSWSNMSWTKYYNRALEYG-DVIKLVGVAKNLDDNNALRSFKNWAASAHDVPLIAINM 926
Query: 189 GERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT--KVFGLISK 246
G+ G +S++L NG + S P P S + + + + K F +
Sbjct: 927 GDNGQLSRIL----NGFMTPVSHPSLPFKAAPGQLSAAEIRRGLSLMGEIQPKKFAVFGT 982
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
P+ S+ P LHN F Y + +D+K F SP+F G SV P K +
Sbjct: 983 PISQSRSPALHNTLFAQSGLPHEYSRLETAKAEDVKDFIR---SPNFGGASVTIPLKLDI 1039
Query: 304 MKFCDEVHPLAQAIAAVNTIIR----RPSDGKLIGYNTDCEASITAIEDA 349
M DE+ P A+ I AVNTI+ + +L+GYNTD + ++ +A
Sbjct: 1040 MPLLDEIAPDAEIIGAVNTIVPVSRGKGQPARLVGYNTDWQGMTLSLRNA 1089
>gi|322692954|gb|EFY84835.1| pentafunctional AROM polypeptide [Metarhizium acridum CQMa 102]
Length = 1570
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 168/402 (41%), Gaps = 37/402 (9%)
Query: 3 VVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQ---PGKDLEII 59
V NI K L + + L + A G+D VEIR+D ++++ + L ++
Sbjct: 1042 VKNIAKKDESFFVSLTVPKLNESLHAISSASV-GSDAVEIRVDLLDDWSLEAVTEQLSLL 1100
Query: 60 LTKKPLPVLIVYRPKWAGGLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYS 118
LPV+ R GG + + R + LA LG +Y+D E+ IL +
Sbjct: 1101 RFVSKLPVIFTVRTVSQGGRFPDAANDHRYDLYRLALRLGVEYLDAEVTSTDEILQELTE 1160
Query: 119 SHQSGTRFIVSCNLDCE-TPSEEDLGYLVSRMQATG-ADIIKLV---FSVNDITEIARI- 172
S ++ IVS + D + S ++ ++ +A D+IKLV S+ D ++A
Sbjct: 1161 SRRN--TLIVSSHHDPSGSLSWKNASWVPFYNRALQYGDVIKLVGNAKSIEDNFDLANFK 1218
Query: 173 FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTY 229
++++ + PIIA ++G G +S++L NG L S P P + +RQ
Sbjct: 1219 SRMMADHKTPIIAINMGVAGQLSRIL----NGFLTPVSHPNLPFKAAPGQLSASEIRQGR 1274
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD 289
+ + F L P+ S+ P LHN F Y + S
Sbjct: 1275 ALLG-QIRKREFYLFGSPISQSRSPALHNALFGITGLPHEYHLHETSSAENLGEVLHSES 1333
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSD-----GKLIGYNTDCEASIT 344
F G SV P K VM DE+ P AQAI AVNTII D +L+G NTD + +
Sbjct: 1334 FGGASVTIPLKRDVMALVDELTPAAQAIGAVNTIIPLNDDISSNRRRLLGDNTDWKGMV- 1392
Query: 345 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
Y A SP+ + G+GG RA +
Sbjct: 1393 ----------YTLSEAGVISPVQNESAAVIGSGGTTRAAIYA 1424
>gi|188997216|ref|YP_001931467.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932283|gb|ACD66913.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 279
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ +T V+G+ PV HSK P F+H+ N +YVP V +D++K + D
Sbjct: 3 LDGNTLVYGIFGYPVKHSKSPTFQTAAFQHLGINAVYVPFQVKPEDIEKAVESLRVLDIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE V+ + +E+ + I AVNTI + DG LIGYNTD
Sbjct: 63 GVNVTIPHKENVIPYLNEISEEVKVIKAVNTI--KNIDGYLIGYNTDW------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
G+ G +AG+ ++ GAGG+ RA+ +G ++GA
Sbjct: 109 -YGFIEGLKEIMPDIAGKRVLVIGAGGSSRAIIYGLLNQGA 148
>gi|430750627|ref|YP_007213535.1| shikimate 5-dehydrogenase [Thermobacillus composti KWC4]
gi|430734592|gb|AGA58537.1| shikimate 5-dehydrogenase [Thermobacillus composti KWC4]
Length = 294
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 19/164 (11%)
Query: 225 LRQTYKVEH---INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLK 279
+ QT E I++ T ++G+I P+ HSK P++ + FR N +Y+ V + L
Sbjct: 1 MNQTTAAEAGPAIDSHTVLYGVIGDPIRHSKSPVMLSRAFRETGVNAVYLAFHVTAERLA 60
Query: 280 KFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDC 339
F + GF+V P+K A+M DE+ P A+A AVNT++RR + KLIGYNTD
Sbjct: 61 AFAEGARAMGMGGFNVTIPHKTAIMAHLDEIDPTAEAAGAVNTVVRR--EDKLIGYNTDG 118
Query: 340 EASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ ++++ G+ L+GR V+ GAGGA R +
Sbjct: 119 IGYVRSLKE------------EAGAELSGRRIVVLGAGGAARGI 150
>gi|350629854|gb|EHA18227.1| hypothetical protein ASPNIDRAFT_207929 [Aspergillus niger ATCC 1015]
Length = 1564
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 35/349 (10%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQPGKD----------LEIILTKKPLPVLIVYRPKWA 76
S++ + G+D VE+R+D + + D L + + LPV+ R K
Sbjct: 1066 SDILKKVCVGSDAVELRVDLLEDPTMDGDIPSVDYVAEQLSFLRSHITLPVIYTIRTKSQ 1125
Query: 77 GGLYEGDEH-KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + D H + LE LA G ++VD E+ +L + + Q G I++ + D +
Sbjct: 1126 GGRFPDDAHAEALELYRLAFRSGLEFVDLEIAFPDEML--RTVTEQKGYSRIIASHHDPK 1183
Query: 136 TP-SEEDLGYLVSRMQATG-ADIIKLVFSVNDITE--IARIFQ--LLSHCQVPIIAYSVG 189
S ++ + +A D+IKLV ++ + R F+ S VP+IA ++G
Sbjct: 1184 GELSWSNMSWTKYYNRALEYGDVIKLVGVAKNLDDNNALRSFKNWAASAHDVPLIAINMG 1243
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT--KVFGLISKP 247
+ G +S++L NG + S P P S + + + + K F + P
Sbjct: 1244 DNGQLSRIL----NGFMTPVSHPSLPFKAAPGQLSAAEIRRGLSLMGEIQPKKFAVFGTP 1299
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
+ S+ P LHN F Y + +D+K F SP+F G SV P K +M
Sbjct: 1300 ISQSRSPALHNTLFAQSGLPHEYSRLETAKAEDVKDFIR---SPNFGGASVTIPLKLDIM 1356
Query: 305 KFCDEVHPLAQAIAAVNTIIR----RPSDGKLIGYNTDCEASITAIEDA 349
DE+ P A+ I AVNTI+ + +L+GYNTD + ++ +A
Sbjct: 1357 PLLDEIAPDAEIIGAVNTIVPVSRGKGQPARLVGYNTDWQGMTLSLRNA 1405
>gi|149183163|ref|ZP_01861612.1| shikimate 5-dehydrogenase [Bacillus sp. SG-1]
gi|148849146|gb|EDL63347.1| shikimate 5-dehydrogenase [Bacillus sp. SG-1]
Length = 277
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 16/156 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I P+GHS P++HN F+ + Y P V +D++K GF+V
Sbjct: 4 LYGVIGNPIGHSMSPLMHNDAFQEKGIDSHYQPFLVKSEDIEKAVKALKVLGVQGFNVTI 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+M DEV PLA+AI AVNT++R+ + IG+NTD I ++E+
Sbjct: 64 PHKRAIMPLLDEVDPLAEAIGAVNTVVRKGD--RFIGFNTDGMGFIRSLEE--------- 112
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
S PL + ++ GAGGA RA+ + + G +
Sbjct: 113 ---SCPFPLDNKAVLIIGAGGAARAIFYSMAASGIK 145
>gi|241954088|ref|XP_002419765.1| pentafunctional AROM polypeptide, putative [Candida dubliniensis
CD36]
gi|327507655|sp|B9WFG1.1|ARO1_CANDC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|223643106|emb|CAX41980.1| pentafunctional AROM polypeptide, putative [Candida dubliniensis
CD36]
Length = 1550
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 168/371 (45%), Gaps = 41/371 (11%)
Query: 36 GADVVEIRLDCINNFQPG-KDLEIILTKK--PLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
GAD VE+R+D + + +I T+K LP++ R GG + + L++L
Sbjct: 1066 GADAVELRVDLLKDTSAAFVAAQIATTRKHADLPIIYTVRTVSQGGKFPDENVDELKSLL 1125
Query: 93 L-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFI-----VSCNL---DCETPSEEDLG 143
L LG Y+D +L A N L ++ SS + TR I ++ L + E ++ + G
Sbjct: 1126 LLGIRLGVAYIDLQL-TAPNELIEEISSKKGFTRIIGTYQDINGELKWNNVEWKNKYNQG 1184
Query: 144 YLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-PIIAYSVGERGLVSQLLSPKF 202
+ ADI++LV N I + + + P+IA+++G +G +SQ+L
Sbjct: 1185 V------SMNADIVRLVGRANSIQDNLDLEDFKKQNTLKPLIAFNLGTQGKLSQVL---- 1234
Query: 203 NGALVYGSLKGTPVL-GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTF 261
NG S + P GL T+ + QTY + K F +I P+ HS+ P LHN +
Sbjct: 1235 NGTFTPISHQLLPNDDGLLTIGEINQTY-FDIGGFTAKKFWVIGSPIEHSRSPNLHNAGY 1293
Query: 262 RHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAV 320
+ +N + D+ + + DF G ++ P K +MKF ++ A+ I AV
Sbjct: 1294 KALNLPYQFGRFEATDVDVVYDNLINKSDFGGLAITMPLKLDIMKFATKLSDAAETIGAV 1353
Query: 321 NTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAG 380
NT+I P +G G NTD I ++ G ++S G ++ GAGG
Sbjct: 1354 NTLI--PVEGGYFGDNTDW----VGISNSFIRAGVPPKSSSNG--------LVVGAGGTS 1399
Query: 381 RALAFGAKSRG 391
RA + G
Sbjct: 1400 RAAIYALHQMG 1410
>gi|333998596|ref|YP_004531208.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-2]
gi|333741045|gb|AEF86535.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-2]
Length = 506
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 171/391 (43%), Gaps = 41/391 (10%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LPVL 68
IC L +++ + L + + + + D+ E+R+D + +P D +++ + P LPVL
Sbjct: 4 ICLCLTGKTIAKDLEVLEKHR-KYVDMAELRVD---HLEP--DERLLIRRFPEQAGLPVL 57
Query: 69 IVYRPKWAGGLYEGDEHKRL----EALHLAE-DLGADYVDFELKVASNILGKQYSSHQSG 123
+ R K GG + G E R+ + L AE D ++ +L+ N+ + ++ G
Sbjct: 58 LTIRRKMDGGKFAGGEGARISLFSKGLAFAEADRRHNFAYVDLEEDLNVPSLEEAARTFG 117
Query: 124 TRFIVSC-NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ-V 181
TR I S NL +EDL + + G +I K+ + ++ R+++ +
Sbjct: 118 TRIIRSYHNLQG---VDEDLPGKIRGLLHVGDEIAKVAVMPHGFDDVLRVYRAAKDTAGI 174
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT--------PVLGLPTVESLRQTYKVEH 233
I +G G +++L+ L Y S +GT G + L + Y+
Sbjct: 175 EKILLCMGHMGTSTRILAEYLGSHLSYASAEGTEQDSDFPPAAPGQISPRELVELYRFRE 234
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
+ + T++FG++ P+ S P N F N + +YVP D + F + G
Sbjct: 235 LTSQTRLFGILGYPLKVSSSPAFFNAVFTSENTDAVYVPFPSDSVDPFMQLAAEIKLQGV 294
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV PYKE V+ + ++ + + A NT+I DG G NTD ++ D I +
Sbjct: 295 SVTIPYKEKVIPYLNKKLGDVETLGACNTLIAE-EDG-WTGANTDARGFSDSLLDFIGKT 352
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALA 384
+K G + GAGG +A+A
Sbjct: 353 NFK-----------GCRITIIGAGGVSKAVA 372
>gi|134077312|emb|CAK45651.1| unnamed protein product [Aspergillus niger]
Length = 1031
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 35/349 (10%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQPGKD----------LEIILTKKPLPVLIVYRPKWA 76
S++ + G+D VE+R+D + + D L + + LPV+ R K
Sbjct: 511 SDILKKVCVGSDAVELRVDLLEDPTMDGDIPSVDYVAEQLSFLRSHITLPVIYTIRTKSQ 570
Query: 77 GGLYEGDEH-KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + D H + LE LA G ++VD E+ +L + + Q G I++ + D +
Sbjct: 571 GGRFPDDAHAEALELYRLAFRSGLEFVDLEIAFPDEML--RTVTEQKGYSRIIASHHDPK 628
Query: 136 TP-SEEDLGYLVSRMQATG-ADIIKLVFSVNDITE--IARIFQ--LLSHCQVPIIAYSVG 189
S ++ + +A D+IKLV ++ + R F+ S VP+IA ++G
Sbjct: 629 GELSWSNMSWTKYYNRALEYGDVIKLVGVAKNLDDNNALRSFKNWAASAHDVPLIAINMG 688
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT--KVFGLISKP 247
+ G +S++L NG + S P P S + + + + K F + P
Sbjct: 689 DNGQLSRIL----NGFMTPVSHPSLPFKAAPGQLSAAEIRRGLSLMGEIQPKKFAVFGTP 744
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
+ S+ P LHN F Y + +D+K F SP+F G SV P K +M
Sbjct: 745 ISQSRSPALHNTLFAQSGLPHEYSRLETAKAEDVKDFIR---SPNFGGASVTIPLKLDIM 801
Query: 305 KFCDEVHPLAQAIAAVNTIIR----RPSDGKLIGYNTDCEASITAIEDA 349
DE+ P A+ I AVNTI+ + +L+GYNTD + ++ +A
Sbjct: 802 PLLDEIAPDAEIIGAVNTIVPVSRGKGQPARLVGYNTDWQGMTLSLRNA 850
>gi|295706669|ref|YP_003599744.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
gi|294804328|gb|ADF41394.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
Length = 279
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 90/161 (55%), Gaps = 16/161 (9%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 295
+ ++GL+ P+GHS P++ N F+ +N + Y P+ + + GF+V
Sbjct: 2 STLYGLVGYPLGHSLSPLMQNDAFKRLNMDAHYEAFPIEPVHFESAIGELKDKNIQGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYK +MK DEV PLA+AI AVNT++++ DG+ IGYNTD E +T++ A++
Sbjct: 62 TIPYKVDIMKHLDEVDPLAKAIGAVNTVVKQ--DGRYIGYNTDGEGYVTSLLKAVE---- 115
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
GS L+ + ++ GAGGA +A+ + ++ A VI
Sbjct: 116 -------GS-LSQKRILIIGAGGAAKAIFYTIAAQHAPEVI 148
>gi|29840484|ref|NP_829590.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila caviae GPIC]
gi|29834833|gb|AAP05468.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila caviae GPIC]
Length = 477
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 172/396 (43%), Gaps = 43/396 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P ++ +Q+L ++ D +E+R+DC+ + + ++ L KKP+
Sbjct: 1 MLCATISGPSFFEAKQQLLHSL-----PFVDSIELRIDCLLSLSSDQLKHLVCLAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LA+ L DY+D + L K + + +
Sbjct: 56 TL-----RRHASLSEIAWVER--TMELAK-LQPDYLDIDKDFPKEALRKIRNQYPN---- 103
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
+ L + + E + L + M A K+ + + R+ Q+ H
Sbjct: 104 -IKIILSYHSQTSEHVPTLYNEMLKQQAHHYKIAITSTKSVDALRLIQIKKHLPENTTVL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++ +++GLI
Sbjct: 163 CMGNEGIASRILSPLMKNAINYASGIHAPKVAPGQLSIEDLL-AYNYANLSSEARIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
P+ S + HN F ++ Y+ + + DLK+FFS F G SV P+K
Sbjct: 222 GNPIDRSISHLSHNKLFSELHMKTSYIKILLSSADLKEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+ + D P + + NT++ + K+ G+NTD + + +K +
Sbjct: 282 VLDYIDVFDPSVKHCQSCNTLVF--NKNKITGHNTDG----LGLLNLLKRKNIAVHNTHV 335
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
G + G+GGA +A+A GA + IF+
Sbjct: 336 G---------IVGSGGAAKAIATTFAYSGACISIFN 362
>gi|237756605|ref|ZP_04585122.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691236|gb|EEP60327.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 279
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ +T V+GL PV HSK P F+H+ N +YVP V +D++K + D
Sbjct: 3 LDGNTLVYGLFGYPVKHSKSPTFQTAVFQHLGINAVYVPFQVKPEDIEKAVESLRVLDIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE V+ + +E+ + I AVNTI + DG LIGYNTD
Sbjct: 63 GVNVTIPHKENVIPYLNEISEEVKVIKAVNTI--KNIDGYLIGYNTDW------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
G+ G +AG+ ++ GAGG+ RA+ +G ++G
Sbjct: 109 -YGFIEGLKEIMPDIAGKRVLVIGAGGSSRAIIYGLLNQGV 148
>gi|119495188|ref|XP_001264384.1| pentafunctional polypeptide (AroM), putative [Neosartorya fischeri
NRRL 181]
gi|327507664|sp|A1D244.1|ARO1_NEOFI RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|119412546|gb|EAW22487.1| pentafunctional polypeptide (AroM), putative [Neosartorya fischeri
NRRL 181]
Length = 1578
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 154/340 (45%), Gaps = 35/340 (10%)
Query: 36 GADVVEIRLDCIN-----NFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + N P D + + ++ LPV+ R K GG + D H
Sbjct: 1074 GSDAVELRVDLLEDPDSANGIPTVDFVADQISYLRSRITLPVIFTIRTKGQGGRFPDDAH 1133
Query: 86 -KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+ ++ LA G ++VD E+ +L + + + ++ I S + S ++ +
Sbjct: 1134 AEAMQLYRLAVRSGCEFVDLEIAFPDEML-RAVTEMKGYSKIITSHHDPKGELSWANMSW 1192
Query: 145 LVSRMQATG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLS 199
+ +A D+IKLV +++D T + + VP+IA ++G G +S++L
Sbjct: 1193 MKYYNRALEYGDVIKLVGVARNLDDNTALRKFKNWAEEAHDVPLIAINMGGNGQLSRIL- 1251
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPILH 257
NG + S P P S K + + K F L P+ S+ P LH
Sbjct: 1252 ---NGFMTPVSHPALPFRAAPGQLSATDIRKGLSLMGEIKKKRFALFGSPISESRSPALH 1308
Query: 258 NPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
N F + Y + V+D+K F +PDF G SV P K +M DE+ A
Sbjct: 1309 NTLFAEMGLPHEYTRLETANVEDVKDFIR---APDFGGASVTIPLKLDIMPLLDEITAEA 1365
Query: 315 QAIAAVNTIIRRPSDG-----KLIGYNTDCEASITAIEDA 349
+ I AVNT++ SDG +L+G+NTD + + + +A
Sbjct: 1366 EIIGAVNTVVPV-SDGEGKPQRLVGHNTDWQGMVQCLRNA 1404
>gi|423070585|ref|ZP_17059361.1| shikimate dehydrogenase [Streptococcus intermedius F0413]
gi|355365671|gb|EHG13393.1| shikimate dehydrogenase [Streptococcus intermedius F0413]
Length = 284
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 19/162 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+Y+ + DDLK D
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISKDDLKATVENIRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
+G+ SF + G+ ++ GAGGA A+ A GA
Sbjct: 109 --KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGA 146
>gi|85859660|ref|YP_461862.1| shikimate 5-dehydrogenase [Syntrophus aciditrophicus SB]
gi|85722751|gb|ABC77694.1| shikimate 5-dehydrogenase [Syntrophus aciditrophicus SB]
Length = 292
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
+ L+ PVGHS P++H+ +H++ G Y V DL + F G SV PY
Sbjct: 24 LLALLGHPVGHSLSPLMHSTALKHLHLEGRYEAWDVSDLSQAMVDLKRKGFRGASVTIPY 83
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
K +M F D++ A++I AVNT+IRR DG +G NTD E I A+ R
Sbjct: 84 KRDIMSFLDDIDEQARSIGAVNTLIRR-GDG-FVGANTDWEGLIRALRSVTSIR------ 135
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
GR FV+ GAGG RA +G G V+ +
Sbjct: 136 --------GRRFVVLGAGGTARAALYGILGEGGGAVVVN 166
>gi|251798006|ref|YP_003012737.1| shikimate 5-dehydrogenase [Paenibacillus sp. JDR-2]
gi|247545632|gb|ACT02651.1| shikimate 5-dehydrogenase [Paenibacillus sp. JDR-2]
Length = 293
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 221 TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDL 278
TV +L I++ T ++G+I PV HSK PI+ N FR NG Y+ + D L
Sbjct: 2 TVSALDNGITGNRIDSQTVLYGVIGDPVRHSKSPIMMNRAFRETGINGAYMAFHISPDKL 61
Query: 279 KKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
+F + + G +V P+K +MK+ DE+ AQAI AVNTI+ +G+L GYNTD
Sbjct: 62 GEFVAGIRAMGIRGVNVTIPHKLDIMKYMDEIDAGAQAIGAVNTIVN--DNGRLTGYNTD 119
Query: 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
+ ++++ + LAG+ ++ GAGGA R + +
Sbjct: 120 GIGYVRSLKEEAEPE------------LAGKRILVIGAGGASRGIVY 154
>gi|428308139|ref|YP_007144964.1| shikimate dehydrogenase [Crinalium epipsammum PCC 9333]
gi|428249674|gb|AFZ15454.1| shikimate dehydrogenase [Crinalium epipsammum PCC 9333]
Length = 291
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I P+ HS P++HN H+ + +Y+P + +DL+ + +++ D
Sbjct: 4 IKGTTKLLGVIGSPIEHSLSPVMHNAAITHLGLDYVYLPFPIKPEDLEIAIAGFAAIDLV 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A+M E+ P+AQA+ AVNT+ R + G NTD E I + D
Sbjct: 64 GFSVTIPHKQAIMPLLSEISPVAQAVGAVNTVWRNHNGWS--GTNTDVEGFIAPLRD--H 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
R ++ A V+ G GGA RA+ G G
Sbjct: 120 NRNWQESVA-----------VILGNGGASRAVVAGCAQLG 148
>gi|150388897|ref|YP_001318946.1| shikimate 5-dehydrogenase [Alkaliphilus metalliredigens QYMF]
gi|166988267|sp|A6TM69.1|AROE_ALKMQ RecName: Full=Shikimate dehydrogenase
gi|149948759|gb|ABR47287.1| shikimate 5-dehydrogenase [Alkaliphilus metalliredigens QYMF]
Length = 286
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ GL+ PV HS P++HN F+H+ + +Y+ V D+LK+ + D A
Sbjct: 5 ISGYTRLVGLLGYPVRHSLSPLMHNMAFQHLGLDYVYLVFEVKEDNLKEAVDAMKTLDVA 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P K+ ++ DE+ A+ I +VNT++ + +G L GYNTD
Sbjct: 65 GFNVTMPNKQKIIPLLDEISEEARLIGSVNTVVNK--NGHLKGYNTDG------------ 110
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+GY G A G G+ V+AGAGGA +++A GA+ +
Sbjct: 111 -KGYVMGLADEGISPEGKTIVIAGAGGASKSVAIQLALEGAKEI 153
>gi|320536898|ref|ZP_08036890.1| putative shikimate 5-dehydrogenase [Treponema phagedenis F0421]
gi|320146254|gb|EFW37878.1| putative shikimate 5-dehydrogenase [Treponema phagedenis F0421]
Length = 496
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 167/374 (44%), Gaps = 52/374 (13%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-----P 64
T IC L ++E+ L + Q D+ E+R D + QP E++L ++
Sbjct: 2 TPKICLVLTEDTIEKNLV-LVQKYRSLIDIAELRADFL---QPQ---EVLLIRRFPELAG 54
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRL----EALHLAEDLGA---DYVDFE--LKVAS----- 110
+PV++ R + GG + E R+ L ++ A Y+D E L+ S
Sbjct: 55 IPVILTVRRRIDGGRFTAGEATRVTIFARGLAFSDPDPAKNFSYIDLEGDLQAPSIEEAA 114
Query: 111 -----NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVND 165
I+ +Y+ ++ T ++D E + +++ + +I+K+ + N
Sbjct: 115 RAFNITIIRSKYNHKKAIT------DIDAE----------IQQVRRSDDEIVKIAYKANS 158
Query: 166 ITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVY---GSLKGTPVLGLPTV 222
++++ +F+ +H + I ++G G+ S+LL+ + N + Y + GL
Sbjct: 159 LSDVTNLFRFANHERGRCILVAMGAYGVPSRLLAGRLNSEITYVMPQEKTSEFIPGLIDP 218
Query: 223 ESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFF 282
SL Y+ + IN TK+FG++ V S GP +HN + N N +Y+P+ +
Sbjct: 219 FSLVYLYRFKQINEKTKIFGVVGSDVSESLGPQMHNKAYAKQNINAVYIPINARVSEDVI 278
Query: 283 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 342
+G S+ P+K+ ++ +E AI A NT + S+G +NTD E+
Sbjct: 279 EFAEVAGVSGLSIDHPFKKPIVSSMNECSKTTTAIRAANTAVY--SNGSWKAFNTDVESF 336
Query: 343 ITAIEDAIKERGYK 356
A+++ ++ + +
Sbjct: 337 SKALQEFLQVKNLR 350
>gi|336271875|ref|XP_003350695.1| hypothetical protein SMAC_02366 [Sordaria macrospora k-hell]
gi|327507672|sp|D1ZA70.1|ARO1_SORMK RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|380094857|emb|CCC07359.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1563
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 166/371 (44%), Gaps = 31/371 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK-RLEAL 91
G+D VE+R+D + ++ P K + ++ + +P++ R GG + D++ L+
Sbjct: 1070 GSDAVELRVDLLEDYDPEFVAKQVALLRSAARIPIVYTVRTVSQGGKFPDDDYALALKLY 1129
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE-TPSEEDLGYLVSRMQ 150
G +Y+D E+ + ++ + +++ G I++ + D + T S ++ G++ +
Sbjct: 1130 RTGLQAGVEYLDLEMTMPDEVI--EAVTNEKGYTHIIASHHDPKATLSWKNGGWIQYYNK 1187
Query: 151 A-TGADIIKLVFSVNDITE---IARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPKFNGA 205
A D++KLV ++++ +AR L+ P I ++G G +S++L NG
Sbjct: 1188 ALQHGDVVKLVGVARELSDNFALARFKASLAAAHDKPFIGLNMGTAGKLSRVL----NGF 1243
Query: 206 LVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFR 262
L S P P + +RQ + + + F L KP+ S+ P LHN FR
Sbjct: 1244 LTPVSHPALPSKAAPGQLSAAEIRQALALIG-ELEPRSFYLFGKPISASRSPALHNALFR 1302
Query: 263 HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
Y D+ + DF G SV P K +M DEV A+ I AVNT
Sbjct: 1303 DNGLPHQYSLFETDNAADVKELIRATDFGGASVTIPLKLDIMPLLDEVSDAAKVIGAVNT 1362
Query: 323 IIRRPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAG 380
II S K L G NTD + A+ +A + K SP AG ++ G+GG
Sbjct: 1363 IIPVGSGDKVTLRGDNTDWMGMVYALRNAGVVKVSKE------SPAAG---MVVGSGGTT 1413
Query: 381 RALAFGAKSRG 391
RA + G
Sbjct: 1414 RAAVYALHDLG 1424
>gi|384495000|gb|EIE85491.1| hypothetical protein RO3G_10201 [Rhizopus delemar RA 99-880]
Length = 1571
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 143/333 (42%), Gaps = 40/333 (12%)
Query: 35 EGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPK-WAGGLYEGD 83
EGAD VE+R+D + + G+ L ++ +PV+ R K AG + D
Sbjct: 1080 EGADAVELRVDLLKKPEEKEGISDIEYVGEQLALLRRTVSIPVIFTVRSKSQAGAFSDND 1139
Query: 84 EHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLG 143
E E L + G +Y+D E+ + + K + Q I+S D + + D
Sbjct: 1140 EEGMFELLRWGQRWGCEYIDVEICWNAQTIEKLVA--QKEESLIISSWHDVQKVTPWDGK 1197
Query: 144 YLVSR--MQATGADIIKLVFSVNDITEIARI--FQLLSHCQVPIIAYSVGERGLVSQLLS 199
+ ++ + A DIIKLV I + ++ F+ +IA ++G G +S++L
Sbjct: 1198 AIETKYELAAKYGDIIKLVGVAETIQDNFKLETFRASKQDGKNLIAINMGAAGQLSRVL- 1256
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFGLISKPVGHSKGPILH 257
N L + P P SL + K H+ + F LI P+ HS P LH
Sbjct: 1257 ---NECLTPVTHPALPQKAAPGQLSLAEINKTRHLIGLLPAQSFWLIGTPIQHSMSPTLH 1313
Query: 258 NPTFR------HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311
N F+ H ++ + +D + P F G SV P+K +VMK+ DEV
Sbjct: 1314 NTGFQTLGLPHHYGLLECHMVEYAED-----AILKDPSFGGASVTIPHKVSVMKYLDEVT 1368
Query: 312 PLAQAIAAVNTIIRRPS------DGKLIGYNTD 338
A+ I AVNT+ R + + IG NTD
Sbjct: 1369 ENAKMIGAVNTVFVRETVVNGEKKRQFIGENTD 1401
>gi|78777476|ref|YP_393791.1| shikimate 5-dehydrogenase [Sulfurimonas denitrificans DSM 1251]
gi|78498016|gb|ABB44556.1| shikimate dehydrogenase [Sulfurimonas denitrificans DSM 1251]
Length = 263
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 18/160 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
K+F + PV HS+ P++HN F+++NY Y + + D K T+ S +G ++ P
Sbjct: 2 KLFAIFGDPVAHSRSPLMHNSVFKNLNYKACYTRIHLQDGSKLKETFLSLKLSGANITVP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KEA CDEV A+ + VNTI+ +G+LIGYNTD + + AI++
Sbjct: 62 HKEAAYAACDEVRGFAKKVGVVNTIVNE--NGRLIGYNTDADGFMFAIKE---------- 109
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
FG + ++ GAGG +ALA G +V + +
Sbjct: 110 ---FGDV---KNILILGAGGTAKALASKFIDSGIKVSVMN 143
>gi|373868603|ref|ZP_09605001.1| Shikimate 5-dehydrogenase I alpha [Sulfurimonas gotlandica GD1]
gi|372470704|gb|EHP30908.1| Shikimate 5-dehydrogenase I alpha [Sulfurimonas gotlandica GD1]
Length = 263
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 18/160 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
K+F + PV HS+ P++HN F+++NY Y + + D K T+ S +G +V P
Sbjct: 2 KLFAIFGDPVSHSRSPLMHNCVFKNLNYKACYTRVHLKDGSKLKETFFSLGLSGANVTVP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE K CDEV A+ + VNT++ +G+LIGYNTD + + AIE+
Sbjct: 62 HKEEAYKACDEVRGFAKTVGVVNTLVNE--NGRLIGYNTDADGFMYAIEE---------- 109
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
FG + +L GAGG +ALA G +V + +
Sbjct: 110 ---FGK--VNNVLIL-GAGGTAKALASRFMQDGIKVSVLN 143
>gi|89898096|ref|YP_515206.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila felis Fe/C-56]
gi|89331468|dbj|BAE81061.1| shikimate biosynthesis protein subunit [Chlamydophila felis
Fe/C-56]
Length = 477
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 170/399 (42%), Gaps = 49/399 (12%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+DC+ + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAKQQLLQSL-----PLVDSIELRVDCLLSLSSNQLKHLISLAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFEL---KVASNILGKQYSSHQSG 123
L K L E +R + LA+ L +Y+D + K A + KQY +
Sbjct: 56 TL-----KKHASLSEIAWIER--TMELAK-LQPEYLDIDKDFPKEALTSIQKQYPN---- 103
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPI 183
+ L + + E L M A K+ + + R Q+ +
Sbjct: 104 ----IKIILSYHSETSEYAPNLHEEMLKRQAHHYKIAITSTRSIDTLRCIQIKKNLPENT 159
Query: 184 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVF 241
+G G+ S++LSP A+ Y + P + G ++ L Y +++A++ ++
Sbjct: 160 TLLCMGNAGIASRILSPLMKNAINYAAGINAPNVAPGQLSIADLL-AYNYTNLSAESSIY 218
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPY 299
GLI PV S + HN F + + Y+ + +D +LK FFS F G SV P+
Sbjct: 219 GLIGNPVNRSISHLSHNKLFSELQIHASYIKILLDSHELKDFFSLTRDLPFQGLSVTMPF 278
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
K V+ + D + AQ + NT++ ++ K+ GYNTD G N
Sbjct: 279 KTKVLDYIDILDHSAQHCQSCNTLVF--NNHKITGYNTD-------------GLGLFNLL 323
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
L + + G+GGA +A+A R+ IF+
Sbjct: 324 KRKHISLQNQHIAIVGSGGAAKAIATTLAREETRISIFN 362
>gi|294501322|ref|YP_003565022.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
gi|294351259|gb|ADE71588.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
Length = 279
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 16/161 (9%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 295
+ ++GL+ P+GHS P++ N F+ +N + Y P+ + + GF+V
Sbjct: 2 STLYGLVGYPLGHSLSPLMQNDAFKRLNMDAHYEAFPIEPVHFESAIGELKDKNIQGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYK +MK DEV PLA+AI AVNT++ + DG+ IGYNTD E +T++ A++
Sbjct: 62 TIPYKVDIMKHLDEVDPLAKAIGAVNTVVNQ--DGRYIGYNTDGEGYVTSLLKAVE---- 115
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
GS L+ + ++ GAGGA +A+ + ++ A VI
Sbjct: 116 -------GS-LSQKRILIIGAGGAAKAIFYTIAAQHAPEVI 148
>gi|125973371|ref|YP_001037281.1| shikimate dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|256004347|ref|ZP_05429328.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 2360]
gi|385778715|ref|YP_005687880.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 1313]
gi|419722931|ref|ZP_14250067.1| shikimate 5-dehydrogenase [Clostridium thermocellum AD2]
gi|419724721|ref|ZP_14251780.1| shikimate 5-dehydrogenase [Clostridium thermocellum YS]
gi|125713596|gb|ABN52088.1| shikimate 5-dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|255991631|gb|EEU01732.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 2360]
gi|316940395|gb|ADU74429.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 1313]
gi|380771940|gb|EIC05801.1| shikimate 5-dehydrogenase [Clostridium thermocellum YS]
gi|380780988|gb|EIC10650.1| shikimate 5-dehydrogenase [Clostridium thermocellum AD2]
Length = 298
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+ TK+ GL+ PV HS P LHN + + +Y+P+ V +DL+ + DF
Sbjct: 6 RVTGKTKLLGLVGNPVEHSISPQLHNTLSSLLGLDIVYIPLAVGKEDLETVVKALKALDF 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V PYK +MK+ DE A + AVNT+ + DG+L GYNTD E +
Sbjct: 66 IGFNVTIPYKRDIMKYLDENSKEAILMGAVNTV--KKIDGRLYGYNTDAEGFL------- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
R +K G G+ VL GAGG RA+A S A
Sbjct: 117 --RSFKEEA---GVGFKGKKVVLIGAGGVARAIAVKIASEDAE 154
>gi|20093557|ref|NP_613404.1| shikimate 5-dehydrogenase [Methanopyrus kandleri AV19]
gi|24211502|sp|Q8TZ24.1|AROE_METKA RecName: Full=Shikimate dehydrogenase
gi|19886404|gb|AAM01334.1| Shikimate 5-dehydrogenase [Methanopyrus kandleri AV19]
Length = 290
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-- 291
++A+T V GLI PV HS P +HN F+ + N +Y+ V + + + D
Sbjct: 7 VDAETNVVGLIGHPVEHSLSPAMHNAAFKELGLNYVYLAFDVPPERLEGAVRGAADLGIV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAVM+ CDE+ A+ I AVNT+ R S GK+ G+NTD E + A++
Sbjct: 67 GLNVTIPHKEAVMELCDELDRDAELIGAVNTV--RFSRGKIEGFNTDGEGFLR----ALR 120
Query: 352 ERGY--KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
E Y GT S V+ GAGGA RA++F + GA ++
Sbjct: 121 EETYFDPRGTKS----------VILGAGGAARAVSFKLATEGADEIVI 158
>gi|408419445|ref|YP_006760859.1| shikimate dehydrogenase AroE [Desulfobacula toluolica Tol2]
gi|405106658|emb|CCK80155.1| AroE: shikimate dehydrogenase [Desulfobacula toluolica Tol2]
Length = 281
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I++ TK++ + KPV HSK P++HN F+ + N +Y+ +D++ + + G
Sbjct: 2 IDSKTKLYCIFGKPVTHSKSPLIHNACFQKHHMNSVYLAFEIDEISDGVKAMRTLNIKGA 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
SV P+KE++MK+ DE+ A +I AVNT++ R +GKLIGYNTD +A+++ +
Sbjct: 62 SVTIPFKESIMKYLDEIDEEALSIGAVNTVVNR--NGKLIGYNTDYKAAVSPLR 113
>gi|423068252|ref|ZP_17057040.1| shikimate dehydrogenase [Streptococcus intermedius F0395]
gi|355367143|gb|EHG14856.1| shikimate dehydrogenase [Streptococcus intermedius F0395]
Length = 284
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 19/162 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYVAWEISEDDLKTTVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
+G+ SF + G+ ++ G+GGA A+ A GA
Sbjct: 109 --KGFFMSLPSF--VIKGKKMLILGSGGAATAIIVQAVLEGA 146
>gi|325191388|emb|CCA26166.1| unnamed protein product [Albugo laibachii Nc14]
Length = 1594
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 164/373 (43%), Gaps = 36/373 (9%)
Query: 35 EGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRL-EA 90
EG D VE+R+D + + +P + ++ LP++ R + GG + D+ + + +
Sbjct: 1081 EGVDAVELRVDLLKSTEPAFVSSQVALLRNITSLPIIFTVRSEAQGGQFPDDQEEEMFDL 1140
Query: 91 LHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN-LDCETP-SEEDLGYLVSR 148
LHLA L ++VD E+ S+ ++ ++ + I S + L + P +EED+ +
Sbjct: 1141 LHLAVRLACEFVDMEV-CWSHSYRTEFIRYRKRSAIIGSFHALQMDAPMNEEDIVAIFKS 1199
Query: 149 MQATG----ADIIKLVFSVNDITEIARIFQ----LLSHCQVPIIAYSVGERGLVSQ---- 196
+G ++ F VND + +I Q C +P+IA E+G +S+
Sbjct: 1200 AYHSGDVQVVKVVVKAFGVNDALLVHQIAQNCLNEWDQC-LPVIALCTTEQGRLSRVLNS 1258
Query: 197 LLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPIL 256
+L+P + L + G L + + LR + + F L PV S P +
Sbjct: 1259 ILTPVTHAKLPKAAAPGQ--LSVKEILDLRSALGM----FPARRFYLFGSPVSKSPSPAI 1312
Query: 257 HNPTFRHVNYNGIYVPMFVDDLKKFF-STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
HN F+ N Y DL++ + F G SV P+K +M DE+ P A+
Sbjct: 1313 HNAGFQAHNLPFQYQLCETLDLEEITRKIRDTTSFGGASVTIPHKIDIMHLLDEISPAAR 1372
Query: 316 AIAAVNTIIR--RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVL 373
AI AVNTI+R R + L G NTD I I R + S L R V+
Sbjct: 1373 AIGAVNTILREDRVTGAHLKGDNTDW----IGILRPIARRLHAQTRPKLASEL--RALVI 1426
Query: 374 AGAGGAGRALAFG 386
GAGG A A+
Sbjct: 1427 -GAGGTSMAAAYA 1438
>gi|350289476|gb|EGZ70701.1| putative PENTAFUNCTIONAL AROM polypeptide [Neurospora tetrasperma
FGSC 2509]
Length = 1563
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 160/361 (44%), Gaps = 29/361 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK-RLEAL 91
G+D VE+R+D + ++ P K + ++ + +P++ R GG + ++K L+
Sbjct: 1070 GSDAVELRVDLLEDYDPEFVAKQVALLRSAARIPIVYTVRTVSQGGKFPDADYKLALKLY 1129
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
G +Y+D E+ + ++ + ++ + T I S + T S ++ G++ +A
Sbjct: 1130 RTGLQAGVEYLDLEMTMPDEVI-EAVTNAKGYTHIIASHHDPKATLSWKNGGWVQYYNKA 1188
Query: 152 -TGADIIKLVFSVNDITE---IARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPKFNGAL 206
D++KLV ++ + +AR L+ P+IA ++G G +S++L NG L
Sbjct: 1189 LQHGDVVKLVGVARELADNFALARFKASLAAAHDKPLIALNMGAAGKLSRVL----NGFL 1244
Query: 207 VYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRH 263
S P P + +RQ + + + F L P+ S+ P LHN FR
Sbjct: 1245 TPVSHPALPSKAAPGQLSAAEIRQALALIG-ELEPRSFHLFGNPISASRSPALHNALFRD 1303
Query: 264 VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 323
Y D+ +P F G SV P K +M DEV A+ I AVNTI
Sbjct: 1304 NGLPHQYSLFETDNAADVKDLIQAPGFGGASVTIPLKLDIMPLLDEVSDAAKVIGAVNTI 1363
Query: 324 I--RRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGR 381
I R L G NTD + A+ +A + K SP AG ++ GAGG R
Sbjct: 1364 IPVRNGDKVTLRGDNTDWMGMVYALRNAGVVKCSKE------SPTAG---MVVGAGGTTR 1414
Query: 382 A 382
A
Sbjct: 1415 A 1415
>gi|134298882|ref|YP_001112378.1| shikimate 5-dehydrogenase [Desulfotomaculum reducens MI-1]
gi|170652868|sp|A4J3A0.1|AROE_DESRM RecName: Full=Shikimate dehydrogenase
gi|134051582|gb|ABO49553.1| shikimate dehydrogenase [Desulfotomaculum reducens MI-1]
Length = 291
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN T+V GL PV HS P +HN F+ ++ N YVP V D+LK+ + S + A
Sbjct: 6 INGKTQVCGLFGFPVEHSFSPAMHNAAFQQLDLNWTYVPFRVHPDNLKQAVTGIFSLNMA 65
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K+ VM F DE+ P A+ I AVNTI+ ++GKL+GYNTD + + A+ + +
Sbjct: 66 GVNVTVPHKQRVMPFLDELEPAARIIGAVNTIVN--NNGKLVGYNTDGKGFVRALTEEAR 123
>gi|114566075|ref|YP_753229.1| shikimate 5-dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122318819|sp|Q0AZJ6.1|AROE_SYNWW RecName: Full=Shikimate dehydrogenase
gi|114337010|gb|ABI67858.1| shikimate dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 290
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 19/171 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
++ T++ GLI P+ HS P++HN T + + N IY+ + +++ L + S + +F
Sbjct: 3 LDIKTELMGLIGYPLQHSLSPLMHNLTLKKMGLNCIYLALEIEEGKLPEIPSAIRTLNFR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYKE ++ F DE+ P A A AVN I + +G L GYNTD + +A++
Sbjct: 63 GLNVTIPYKEKIIPFLDELSPEAAAFGAVNVI--KNKNGHLHGYNTDGRGFV----EALR 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDF 401
E G G + +F+ GAGGA R++AF G +R+ D+DF
Sbjct: 117 EEGIDPGERA--------LFI--GAGGAARSVAFALAGLGVSRLDFLDLDF 157
>gi|365157945|ref|ZP_09354189.1| shikimate 5-dehydrogenase [Bacillus smithii 7_3_47FAA]
gi|363622355|gb|EHL73521.1| shikimate 5-dehydrogenase [Bacillus smithii 7_3_47FAA]
Length = 282
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++G+I P+ HS P +HN F + Y P V +DLKK + GF+V
Sbjct: 3 KLYGVIGDPIAHSMSPAMHNDAFSRLGIPAYYHPFHVKPNDLKKAVEGMKAIGVEGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A++ DE+ PLA+AI AVNT++R+ + + IGYNTD + + RG K
Sbjct: 63 IPHKTAIIPLLDELDPLAEAIGAVNTVVRK--NDRWIGYNTDGDGFV---------RGLK 111
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ G L ++ GAGGA RA+ + S R++
Sbjct: 112 E---TLGRDLHLDHILIIGAGGAARAIYYTLASEHVRLI 147
>gi|336468271|gb|EGO56434.1| hypothetical protein NEUTE1DRAFT_147102 [Neurospora tetrasperma FGSC
2508]
Length = 1596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 159/361 (44%), Gaps = 29/361 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLY-EGDEHKRLEAL 91
G+D VE+R+D + ++ P K + ++ + +P++ R GG + + D L+
Sbjct: 1103 GSDAVELRVDLLEDYDPEFVAKQVALLRSAARIPIVYTVRTVSQGGKFPDADYELALKLY 1162
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
G +Y+D E+ + ++ + ++ + T I S + T S ++ G++ +A
Sbjct: 1163 RTGLQAGVEYLDLEMTMPDEVI-EAVTNAKGYTHIIASHHDPKATLSWKNGGWVQYYNKA 1221
Query: 152 -TGADIIKLVFSVNDITE---IARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPKFNGAL 206
D++KLV ++ + +AR L+ P+IA ++G G +S++L NG L
Sbjct: 1222 LQHGDVVKLVGVARELADNFALARFKASLAAAHDKPLIALNMGAAGKLSRVL----NGFL 1277
Query: 207 VYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRH 263
S P P + +RQ + + + F L P+ S+ P LHN FR
Sbjct: 1278 TPVSHPALPSKAAPGQLSAAEIRQALALIG-ELEPRSFHLFGNPISASRSPALHNALFRD 1336
Query: 264 VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 323
Y D+ +P F G SV P K +M DEV A+ I AVNTI
Sbjct: 1337 NGLPHQYSLFETDNAADVKDLIQAPGFGGASVTIPLKLDIMPLLDEVSDAAKVIGAVNTI 1396
Query: 324 I--RRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGR 381
I R L G NTD + A+ +A + K SP AG ++ GAGG R
Sbjct: 1397 IPVRNGDKVTLRGDNTDWMGMVYALRNAGVVKCSKE------SPTAG---MVVGAGGTTR 1447
Query: 382 A 382
A
Sbjct: 1448 A 1448
>gi|421490826|ref|ZP_15938193.1| shikimate dehydrogenase [Streptococcus anginosus SK1138]
gi|400371823|gb|EJP24772.1| shikimate dehydrogenase [Streptococcus anginosus SK1138]
Length = 284
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENTCRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+G+ SF + G+ V+ GAGGA A+ A G
Sbjct: 109 -KGFFMSLPSF--VVKGKKMVMLGAGGAATAIIVQAALDG 145
>gi|428207318|ref|YP_007091671.1| shikimate dehydrogenase [Chroococcidiopsis thermalis PCC 7203]
gi|428009239|gb|AFY87802.1| shikimate dehydrogenase [Chroococcidiopsis thermalis PCC 7203]
Length = 294
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 7/160 (4%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P +HN H+ + +Y+P+ V +DL +++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPAMHNAAIAHLGLDYVYLPLPVKPEDLAAALQGFAAIGLV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+ P+K+A++ F EV P+AQA+ AVNT+ R +D G NTD E + + ++
Sbjct: 62 GFNATIPHKQAILPFLSEVSPVAQAVGAVNTVWR--TDEGWAGTNTDVEGFLAPL---LE 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ K+ + SP + ++ V+ G GGA RA+ G G
Sbjct: 117 KSKVKSQKSKIDSPDSPQIAVILGNGGAARAVVAGCSQLG 156
>gi|343525459|ref|ZP_08762414.1| putative shikimate dehydrogenase [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|343395729|gb|EGV08267.1| putative shikimate dehydrogenase [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
Length = 250
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYVAWEISEDDLKTTVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+G+ SF + G+ ++ GAGGA A+ A G
Sbjct: 109 --KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEG 145
>gi|392989569|ref|YP_006488162.1| shikimate 5-dehydrogenase [Enterococcus hirae ATCC 9790]
gi|392336989|gb|AFM71271.1| shikimate 5-dehydrogenase [Enterococcus hirae ATCC 9790]
Length = 287
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ G +KP HS P++HN F H + +Y+ VD +L++ + + D
Sbjct: 2 ISGKTKLTGFFAKPASHSLSPLMHNLAFSHWGIDAVYLAFEVDQTNLRQAVESIRTLDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P K AV+ + D++ P A+ I AVNTI+ + + +LIGYNTD
Sbjct: 62 GVNVSMPNKTAVLAYLDQLSPEAELIGAVNTIVHQ--EQRLIGYNTDG------------ 107
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G+ G P+ + V+ GAGGA +A+ GA+ +
Sbjct: 108 -MGFVRSVNETGHPIKNQKIVVLGAGGAAKAIVVQMALEGAQEI 150
>gi|406949085|gb|EKD79664.1| hypothetical protein ACD_41C00014G0001 [uncultured bacterium]
Length = 341
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 46/264 (17%)
Query: 135 ETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLV 194
TPS + L ++ ++ K+ VN ++ + +L +I +GE G++
Sbjct: 49 RTPSYQFLDQVIKKI-----SFPKIATQVNTADDLYTLAKLQKKYGKQVIVVGMGELGMM 103
Query: 195 SQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSK 252
+++ + L Y S+ T G TV+ L+ TK+FGL+ + HS
Sbjct: 104 TRVYN---KSLLTYASVSRSTTTAPGQLTVDELK----------STKIFGLVGDDIQHSL 150
Query: 253 GPILHN-PTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311
P LH +R+ + DDLKKF ++ G SV P+K VM++CD +
Sbjct: 151 SPKLHGGQPYRYQLWQ-------TDDLKKFMFVFNWFQLPGASVTKPFKIEVMQYCDRLD 203
Query: 312 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF 371
AQ I AVNTI+R+ + +L+GYNTD ++ I G L G+
Sbjct: 204 SDAQKIGAVNTIVRQGN--QLVGYNTDW----IGVDKVI------------GKYLPGKRV 245
Query: 372 VLAGAGGAGRALAFGAKSRGARVV 395
+ G GGAG+A+AF K R R V
Sbjct: 246 RILGKGGAGKAVAFTVKKRKGRTV 269
>gi|255718639|ref|XP_002555600.1| KLTH0G13090p [Lachancea thermotolerans]
gi|327507660|sp|C5DN02.1|ARO1_LACTC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238936984|emb|CAR25163.1| KLTH0G13090p [Lachancea thermotolerans CBS 6340]
Length = 1579
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 170/381 (44%), Gaps = 56/381 (14%)
Query: 36 GADVVEIRLDCINNFQ---PGKDLEII-LTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G VE+R+D + ++ K L I+ L LP++ R K GG + D+ L +L
Sbjct: 1089 GCSAVELRVDQLKSYDLDFVAKQLSILRLASSSLPIIFTIRTKSQGGQFPDDDKSTLGSL 1148
Query: 92 -HLAEDLGADYVDFELKVASNILGKQYS--SHQSGTRFIVSC-NLDCE---TPSEEDLGY 144
LA ++G ++VD EL ++S + QYS +++ T+ I S + D + SE + Y
Sbjct: 1149 LSLALEVGVEFVDMELTLSSEL---QYSLVNNKRNTKIIGSHHDFDAKFDWNDSEWENRY 1205
Query: 145 LVSRMQATGADIIKLVFSVNDITEIARIFQL-LSHCQVPIIAYSVGERGLVSQLLSPKFN 203
++ + D++K V + D + ++ Q L H P+IA ++ + G +S++L N
Sbjct: 1206 --NQALSLDVDVVKFVGTAKDFEDNLKLEQFRLQHTAKPLIAINMTDVGKMSRVL----N 1259
Query: 204 GALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPILHNPTF 261
L + P P +L Q ++ + K F ++ P+ HS+ P+LHN
Sbjct: 1260 TVLTPVTSSLLPSASAPGQLTLSQINEIYTLLGGFSAKNFYVVGSPISHSRSPVLHN--- 1316
Query: 262 RHVNYNGIYVPMFVDDLKKFFSTYSSP---------DFAGFSVGFPYKEAVMKFCDEVHP 312
Y + +P +KF ++ +S G +V P K +M+F DE+
Sbjct: 1317 --TGYKILGLP---HKFEKFETSSASEVKDKLLSKCKLGGLAVTIPLKLDIMEFMDELSE 1371
Query: 313 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP--LAGRM 370
A+ I AVNT+I DGK G NTD G N + G P + G
Sbjct: 1372 SAKLIGAVNTVIPL-GDGKFKGDNTDW-------------LGIYNSFLANGVPENVRGNS 1417
Query: 371 FVLAGAGGAGRALAFGAKSRG 391
+ GAGG RA + G
Sbjct: 1418 GFVIGAGGTSRAAVYALHQLG 1438
>gi|389581076|ref|ZP_10171103.1| shikimate 5-dehydrogenase [Desulfobacter postgatei 2ac9]
gi|389402711|gb|EIM64933.1| shikimate 5-dehydrogenase [Desulfobacter postgatei 2ac9]
Length = 266
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+A T+++ L P HSKGP++HN F+ + N +Y+ V D + D G
Sbjct: 2 IDAATRLYCLFGNPARHSKGPVIHNAAFKDKDINAVYLAFEVQDAAGAAQAVRTLDIKGA 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASI 343
SV P+KE++M+ D + P A+AI AVNTI+ +G L GYNTDC+A++
Sbjct: 62 SVTIPFKESIMEHIDWIDPTARAIGAVNTIVNE--NGVLKGYNTDCQAAV 109
>gi|213401703|ref|XP_002171624.1| pentafunctional AROM polypeptide [Schizosaccharomyces japonicus
yFS275]
gi|327507670|sp|B6JVD0.1|ARO1_SCHJY RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|211999671|gb|EEB05331.1| pentafunctional AROM polypeptide [Schizosaccharomyces japonicus
yFS275]
Length = 1584
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 158/379 (41%), Gaps = 38/379 (10%)
Query: 36 GADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPKWAGGLY-EGDE 84
G D VE+R D + + + + LP++ R K GG + +E
Sbjct: 1077 GCDAVELRADLLEDPNSTTGYPSVEFVAEQFATLRAAIDLPIIFTVRSKDQGGRFPNANE 1136
Query: 85 HKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+ +E + A G D +D EL ++ L Y+ ++ T+ I S + + S
Sbjct: 1137 SEAVELMLAALRWGVDVLDLELGWSTESLQAIYARKEN-TKIITSWHDTAQRCSWAQPDE 1195
Query: 145 LVSRMQATGA--DIIKLV---FSVNDITEIARIFQLLS-HCQVPIIAYSVGERGLVSQLL 198
+ ++ A D++K V S+ D ++ + + + P+IA ++G G +S++
Sbjct: 1196 WLQKLDMATAFGDVVKFVGIAKSMQDNFDLEKFRKSFKGYTNKPLIAINMGTVGQLSRV- 1254
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPIL 256
FN L + P P S+RQ + + K F L P+ HSK PIL
Sbjct: 1255 ---FNNVLTPVTSPALPYKAAPGQLSVRQIITALSLMGSISPKKFYLFGTPIQHSKSPIL 1311
Query: 257 HNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316
H + Y + ++ S PDF G +V PYK ++++ DE+ A+
Sbjct: 1312 HKTCYDLTGLPYTYDLFETESVEGVKDVLSQPDFGGANVTIPYKLDILQYLDELSDEARF 1371
Query: 317 IAAVNTIIRRPSDG--KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
+ AVNT++ +G KL G NTD + A G N L G+ ++
Sbjct: 1372 LGAVNTVVPISENGKRKLRGDNTDWRGIVRTFVRA----GANN--------LNGKNALVI 1419
Query: 375 GAGGAGRALAFGAKSRGAR 393
GAGG RA F GA+
Sbjct: 1420 GAGGTSRAAIFAMHKLGAK 1438
>gi|332799771|ref|YP_004461270.1| shikimate dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|332697506|gb|AEE91963.1| Shikimate dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
Length = 290
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
++ T+++ ++ P+ HS PI+HN F + N + I++ + D +LK S D
Sbjct: 7 VSGKTQIYAILGTPISHSLSPIIHNTLFCYNNLDKIFLALNTDTNNLKLAIDAVRSFDIK 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G S+ P KE V+K+CD++ P A+ I AVN I+ + +G L+GYNTDC
Sbjct: 67 GLSITMPLKEEVVKYCDKLLPEAEIIGAVNCILNK--NGTLVGYNTDC------------ 112
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
G+ + L R+F+ GAGG G+A+A +G +
Sbjct: 113 -TGFSMSIINKVGVLPDRVFIF-GAGGVGKAIAAELILKGVK 152
>gi|418965062|ref|ZP_13516849.1| shikimate dehydrogenase [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343895|gb|EID22067.1| shikimate dehydrogenase [Streptococcus constellatus subsp.
constellatus SK53]
Length = 284
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 19/162 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+Y+ + DDLK +
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISEDDLKTTVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
+G+ SF + G+ ++ G+GGA A+ A GA
Sbjct: 109 --KGFFMSLPSF--VIKGKKMLILGSGGAATAIIVQAVLEGA 146
>gi|418963256|ref|ZP_13515095.1| shikimate dehydrogenase [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|383343371|gb|EID21555.1| shikimate dehydrogenase [Streptococcus anginosus subsp. whileyi
CCUG 39159]
Length = 284
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRCYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+ V+ F DEV P AQ I AVNT++ + GKLIGYNTD
Sbjct: 63 GINLSMPYKQVVIPFLDEVTPAAQMIGAVNTVVNQ--HGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
+G+ SF + G+ V+ GAGGA A+ A G
Sbjct: 109 -KGFFMSLPSF--VIKGKKMVMLGAGGAATAIIVQAALDGTE 147
>gi|387783729|ref|YP_006069812.1| shikimate dehydrogenase [Streptococcus salivarius JIM8777]
gi|338744611|emb|CCB94977.1| shikimate dehydrogenase [Streptococcus salivarius JIM8777]
Length = 285
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
SP + +L GAGGA +A+ A GA+ V
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKV 149
>gi|331700628|ref|YP_004397587.1| shikimate dehydrogenase [Lactobacillus buchneri NRRL B-30929]
gi|329127971|gb|AEB72524.1| Shikimate dehydrogenase [Lactobacillus buchneri NRRL B-30929]
Length = 290
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I+ TK+FGL++ P HS P++HN +F+ NGIY+ V L + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFQVTGINGIYLAFDVTSAGLADSLAAMRAMHIG 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P K V+ DE+ P A+ ++AVNT+I R DG+LIG +TD + + DA+K
Sbjct: 62 GFNLSMPLKTDVLPLLDEITPRAERLSAVNTVINR--DGRLIGDSTDGQGWV----DALK 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ + ++ + GAGGAGRA+ A GA+ V
Sbjct: 116 QDDMT---------IDEKVVTVLGAGGAGRAIISAAVDAGAKQV 150
>gi|328949355|ref|YP_004366692.1| 3-dehydroquinate dehydratase [Treponema succinifaciens DSM 2489]
gi|328449679|gb|AEB15395.1| 3-dehydroquinate dehydratase [Treponema succinifaciens DSM 2489]
Length = 497
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 165/367 (44%), Gaps = 32/367 (8%)
Query: 13 ICAPLMAQSVEQVLS--NMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LP 66
IC L +++ + L N Y++ D+ E+R+D +N +D + + P LP
Sbjct: 6 ICLTLTGKTLAEDLELLNKYRSYV---DMAELRVDFLN-----QDERLYARRFPSMAGLP 57
Query: 67 VLIVYRPKWAGGLY-EGDEHKRL---EALHLAEDLGAD---YVDFELKVASNILGKQYSS 119
++ R + GG + EG+ + + AL A++ YVDFE +I + ++
Sbjct: 58 CILTIRREIDGGKFVEGESARTILFARALSFADEDKTKNFAYVDFEEDF--HISSLEDAT 115
Query: 120 HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC 179
T+ I S + D + P L L + +G +I K+ F + + ++ +F+ S
Sbjct: 116 LAFETKVIRSFH-DMKNPVRNILERL-KELNPSGLEIPKIAFMPHSLDDVTNLFEQASKI 173
Query: 180 Q-VPIIAYSVGERGLVSQLLSPKFNGALVYGS----LKGTPVLGLPTVESLRQTYKVEHI 234
I ++G G+ +++L K L Y S ++ T + L Y+ + I
Sbjct: 174 SGNNHIMLAMGTMGIPTRVLGAKLKNFLTYTSAPESIQNTSNIAHLDAVKLGGLYRTKSI 233
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
N TK+FG+ P+ + P LHN + N +Y+P + ++ G S
Sbjct: 234 NESTKIFGITGWPLSGTSSPELHNTGYCRHGMNAVYIPFPAEKFEQAIDFSEQVGVQGLS 293
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+KEA + D V A I + NT+I++ DGK + YNTD E + A+ + + +
Sbjct: 294 VTVPHKEAALARADFVDNAALEIGSSNTLIKK--DGKWLAYNTDAEGFLKALLEFLNLKN 351
Query: 355 YKNGTAS 361
K+ S
Sbjct: 352 LKHKKIS 358
>gi|225850624|ref|YP_002730858.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]
gi|225646318|gb|ACO04504.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]
Length = 281
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 17/164 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN +T+V+G+ PV HSK P+ N F ++ N +Y+P V +DLK +
Sbjct: 5 INGETEVYGIFGYPVKHSKSPLFQNAAFSYLGINAVYLPFSVKPEDLKNAVEGIRALSIK 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+KE V+K +E+ + I A NTI + DG LI YNTD
Sbjct: 65 GVNITVPHKEEVLKLVNEISEEVKYIGASNTI--KNIDGYLIAYNTDA------------ 110
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G+ G ++G+ ++ GAGGA RA+ +G GA +
Sbjct: 111 -YGFIQGLKELVENISGKKVLVIGAGGASRAVVYGLIKEGAEKI 153
>gi|451945874|ref|YP_007466469.1| shikimate dehydrogenase [Desulfocapsa sulfexigens DSM 10523]
gi|451905222|gb|AGF76816.1| shikimate dehydrogenase [Desulfocapsa sulfexigens DSM 10523]
Length = 273
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T ++G+I PV HS P +HN + + +Y+P D+ + G
Sbjct: 3 ISGTTVLYGIIGNPVTHSLSPAMHNAALAALGIDAVYLPFPASDIAAAVTGIRGLGIQGL 62
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE+VM D V P+A I AVNTI+ ++ L G NTD + A+E+ I
Sbjct: 63 SVTIPHKESVMALLDTVDPVAVKIGAVNTIVN--TEKVLTGLNTDWLGATRALEEEID-- 118
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
L+G V+ GAGG+ RA+ FG +GA + +
Sbjct: 119 ------------LSGAHAVILGAGGSARAIGFGLLEKGASITL 149
>gi|406605383|emb|CCH43182.1| shikimate 5-dehydrogenase [Wickerhamomyces ciferrii]
Length = 1536
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 168/371 (45%), Gaps = 38/371 (10%)
Query: 27 SNMYQAKAEGADVVEIRLD-CINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
S + K GA+ +EI L + +++ I+ LP + + P YE
Sbjct: 1056 SESLETKTYGANSIEIVLKKSYSKKFIEQNIAILRKFSDLPTIFTFLPTSDLKTYE---- 1111
Query: 86 KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI---VSCNLDCETPSEEDL 142
E +++A G D+V +L + + +L ++ ++ T+ I V + + +++ L
Sbjct: 1112 ---EIINIAFKNGVDFVSLDLTLDAELL-RRLIDNKGFTKVIGTFVDSTGELKWGNDDFL 1167
Query: 143 GYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPK 201
GY Q +D+IKLV + I + + S Q +I+Y+ G++S++ +P
Sbjct: 1168 GYY-KFAQVINSDLIKLVGVASSIVDNFELESFRSKFQDSTLISYNTSRNGVLSRVTNPL 1226
Query: 202 FNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT-KVFGLISKPVGHSKGPILHNPT 260
TPV ++E+L + I D K F ++ P+GHSK PILH+
Sbjct: 1227 L-----------TPVTFNESIETLNSLFY--QIGGDVQKKFYVVGSPIGHSKSPILHSTG 1273
Query: 261 FRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAV 320
++ + + DD+ K SP+F G +V P K +++ DE+ A I AV
Sbjct: 1274 YKILGLPHSFEKFETDDVNKVVELIKSPNFGGAAVTIPLKLDILEHLDELTESASIIGAV 1333
Query: 321 NTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAG 380
NT+I +GK G NTD I+D++ G+ T S S + G ++ GAGG
Sbjct: 1334 NTVIPL-GNGKFKGDNTDW----IGIKDSLLANGFP--TISKDSKVNG---LVIGAGGTS 1383
Query: 381 RALAFGAKSRG 391
RA + + G
Sbjct: 1384 RAAIYALHNLG 1394
>gi|344300412|gb|EGW30733.1| hypothetical protein SPAPADRAFT_142469 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1563
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 160/373 (42%), Gaps = 39/373 (10%)
Query: 36 GADVVEIRLDCINNFQ---PGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRL-EAL 91
G+D VE+R+D + ++ + I+ LP++ R K GG + + +L E L
Sbjct: 1072 GSDAVELRVDLLKDYSLTFVAEQTAILRKYIDLPIVYTVRTKSQGGSFPEENVDQLRELL 1131
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
L LG Y+D EL + ++ +Q +++ TR I S + ++ + QA
Sbjct: 1132 LLGIKLGVGYLDLELTTPNEVI-EQVLANKGFTRIIGSHHDFTGALKWNNVEWKNKYNQA 1190
Query: 152 T--GADIIKLV-----FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSP---K 201
ADI+KLV F N EI R L P+IA ++GE+G +S++L+P
Sbjct: 1191 VSLNADIVKLVGTAKSFQDNIDLEIFRRENTLK----PLIAVNMGEQGKLSRVLNPILTP 1246
Query: 202 FNGALVYGSLKGTPVLGLPTV-ESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPT 260
L+ GT L + + ++ + H K F +I P+ HS+ P LHN
Sbjct: 1247 ITHELIPNKPTGTGQLSIKEINKAFTEIGGFTH-----KKFYVIGSPIEHSRSPNLHNAG 1301
Query: 261 FRHVNYNGIYVPMFVDDLKKFFSTY--SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIA 318
+ +N + +D + DF G ++ P K +MK+ E+ A+ I
Sbjct: 1302 YEKLNLPYTFDRFEAEDADVVYEQLIKDKADFGGLAITMPLKLQIMKYATELSDAAKVIG 1361
Query: 319 AVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG 378
AVNT+I P G G NTD I + +NG S + + + G GG
Sbjct: 1362 AVNTLI--PVQGGYFGDNTDYVGIINSF--------IRNGVPSIENSKVNGLVI--GGGG 1409
Query: 379 AGRALAFGAKSRG 391
RA + G
Sbjct: 1410 TSRAAIYALHEMG 1422
>gi|312863765|ref|ZP_07724003.1| shikimate dehydrogenase [Streptococcus vestibularis F0396]
gi|311101301|gb|EFQ59506.1| shikimate dehydrogenase [Streptococcus vestibularis F0396]
Length = 285
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
SP + +L GAGGA +A+ A GA+ V
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKV 149
>gi|57117457|gb|AAW33954.1| AROM pentafunctional enzyme, partial [Komagataella pastoris]
Length = 1539
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 151/335 (45%), Gaps = 31/335 (9%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL- 91
G D VE+R+D + + I+ + +P+L R K GG + D ++ +E L
Sbjct: 1062 GCDAVELRVDLLKQHDSHFISNQIGILRNQTSVPILFTIRTKSQGGRFPDDSYEDIERLL 1121
Query: 92 HLAEDLGADYVDFELKVA----SNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 147
+LA LG +YVD EL + ++ K+ + G+ S + E+ L
Sbjct: 1122 NLAIKLGVEYVDLELSLPESLLDSVASKRQFTKIIGSHHDFSGTVKWNNVEWENKYLLAL 1181
Query: 148 RMQATGADIIKLV---FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
++ DIIK V S+ND E+ L H P I ++G G VS++ FN
Sbjct: 1182 KLNV---DIIKFVGTATSLNDNWELEHFRSL--HTDKPFIGINMGPLGKVSRV----FNT 1232
Query: 205 ALVYGSLKGTPVLGLPTVESLRQ--TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFR 262
L + K P P +L++ Y + + K F ++ KP+ HSK P LH +
Sbjct: 1233 ILTPVTHKDLPSSAAPGQLTLKEINEYFGQFGGSSRKKFYIVGKPISHSKSPELHKTFYD 1292
Query: 263 HVNYNGIYVPMFVDDLKKFFS--TYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAV 320
+ + DD K F+ + + G +V P K ++K+ +E+ A++I A+
Sbjct: 1293 EFGLSHTFDKFETDDAAKVFNDLVKGNDELGGCAVTIPLKIDMLKYVNELTDSAKSIGAL 1352
Query: 321 NTIIRRP-SDGKLIGYNTDCEASITAIEDAIKERG 354
NTII P DG+ IG NTD I D++ + G
Sbjct: 1353 NTII--PIGDGRFIGDNTDW----IGIRDSLHQAG 1381
>gi|228478338|ref|ZP_04062946.1| shikimate 5-dehydrogenase [Streptococcus salivarius SK126]
gi|228250017|gb|EEK09287.1| shikimate 5-dehydrogenase [Streptococcus salivarius SK126]
Length = 285
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
SP + +L GAGGA +A+ A GA+ V
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKV 149
>gi|438003027|ref|YP_007272770.1| shikimate 5-dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|432179821|emb|CCP26794.1| shikimate 5-dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
Length = 287
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
++ T+++ ++ P+ HS PI+HN F + N + I++ + D +LK S D
Sbjct: 7 VSGKTQIYAILGTPISHSLSPIIHNTLFCYNNLDKIFLALNTDTNNLKLAIDAVRSFDIK 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G S+ P KE V+K+CD++ P A+ I AVN I+ + +G L+GYNTDC
Sbjct: 67 GLSITMPLKEEVVKYCDKLLPEAEIIGAVNCILNK--NGTLVGYNTDCT----------- 113
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
G+ + L R+F+ GAGG G+A+A +G +
Sbjct: 114 --GFSMSIINKVGVLPDRVFIF-GAGGVGKAIAAELILKGVK 152
>gi|406026143|ref|YP_006724975.1| shikimate 5-dehydrogenase [Lactobacillus buchneri CD034]
gi|405124632|gb|AFR99392.1| Shikimate 5-dehydrogenase [Lactobacillus buchneri CD034]
Length = 290
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I+ TK+FGL++ P HS P++HN +F+ NGIY+ V L + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFQVTGINGIYLAFDVTSAGLADSLAAMRAMHIG 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P K V+ DE+ P A+ ++AVNT+I R DG+LIG +TD + + DA+K
Sbjct: 62 GFNLSMPLKTDVLPLLDEITPRAERLSAVNTVINR--DGRLIGDSTDGQGWV----DALK 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ + ++ + GAGGAGRA+ A GA+ V
Sbjct: 116 QDDIT---------IDEKVVTVLGAGGAGRAIISAAVDAGAKQV 150
>gi|254571247|ref|XP_002492733.1| Pentafunctional arom protein [Komagataella pastoris GS115]
gi|327507688|sp|C4R4R8.1|ARO1_PICPG RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238032531|emb|CAY70554.1| Pentafunctional arom protein [Komagataella pastoris GS115]
gi|328353259|emb|CCA39657.1| shikimate 5-dehydrogenase [Komagataella pastoris CBS 7435]
Length = 1545
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 151/335 (45%), Gaps = 31/335 (9%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL- 91
G D VE+R+D + + I+ + +P+L R K GG + D ++ +E L
Sbjct: 1068 GCDAVELRVDLLKQHDSHFISNQIGILRNQTSVPILFTIRTKSQGGRFPDDSYEDIERLL 1127
Query: 92 HLAEDLGADYVDFELKVA----SNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 147
+LA LG +YVD EL + ++ K+ + G+ S + E+ L
Sbjct: 1128 NLAIKLGVEYVDLELSLPESLLDSVASKRQFTKIIGSHHDFSGTVKWNNVEWENKYLLAL 1187
Query: 148 RMQATGADIIKLV---FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
++ DIIK V S+ND E+ L H P I ++G G VS++ FN
Sbjct: 1188 KLNV---DIIKFVGTATSLNDNWELEHFRSL--HTDKPFIGINMGPLGKVSRV----FNT 1238
Query: 205 ALVYGSLKGTPVLGLPTVESLRQ--TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFR 262
L + K P P +L++ Y + + K F ++ KP+ HSK P LH +
Sbjct: 1239 ILTPVTHKDLPSSAAPGQLTLKEINEYFGQFGGSSRKKFYIVGKPISHSKSPELHKTFYD 1298
Query: 263 HVNYNGIYVPMFVDDLKKFFS--TYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAV 320
+ + DD K F+ + + G +V P K ++K+ +E+ A++I A+
Sbjct: 1299 EFGLSHTFDKFETDDAAKVFNDLVKGNDELGGCAVTIPLKIDMLKYVNELTDSAKSIGAL 1358
Query: 321 NTIIRRP-SDGKLIGYNTDCEASITAIEDAIKERG 354
NTII P DG+ IG NTD I D++ + G
Sbjct: 1359 NTII--PIGDGRFIGDNTDW----IGIRDSLHQAG 1387
>gi|308271588|emb|CBX28196.1| hypothetical protein N47_G35200 [uncultured Desulfobacterium sp.]
Length = 289
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-P 288
K+ I +TK+ +I P+ HS P +HN + ++ + +YV V+D+K + +
Sbjct: 3 KLTSIGTNTKLCAVIGNPISHSLSPAIHNAGYDALDLDFVYVSFRVEDIKNALAGMRALE 62
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+F G SV P+K A++ DE+ L + I ++NT+I GKLIG TD ++ AI D
Sbjct: 63 NFRGMSVTIPHKIAIIDLVDEISDLDRNIGSINTVINEK--GKLIGLGTDGPGALKAIRD 120
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRG-ARVVIFDID 400
A G L G+ ++ G+GGA RA+AF A++ G ++ + DID
Sbjct: 121 A-------------GVNLEGQKVLMIGSGGAARAIAFTLAQNAGLEKLTLLDID 161
>gi|307721327|ref|YP_003892467.1| shikimate dehydrogenase [Sulfurimonas autotrophica DSM 16294]
gi|306979420|gb|ADN09455.1| shikimate dehydrogenase [Sulfurimonas autotrophica DSM 16294]
Length = 264
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 18/161 (11%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 297
+K+F + PV HS+ P++HN F+++NY Y ++D K T+ + G +V
Sbjct: 2 SKLFSIFGNPVSHSRSPLMHNAVFKNLNYKACYTRTLLEDDTKLKETFFALGLDGANVTV 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+KE+ + CDE+ A+ I VNT+I +GKLIGYNTD + + AI++ + KN
Sbjct: 62 PHKESAYEACDEIRGFAKKIGVVNTLINE--NGKLIGYNTDADGFMYAIDEF---KDIKN 116
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
++ GAGG +AL G V I +
Sbjct: 117 -------------ILVLGAGGTAKALVQKFLEEGLHVSILN 144
>gi|282898783|ref|ZP_06306770.1| Quinate/Shikimate 5-dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
gi|281196310|gb|EFA71220.1| Quinate/Shikimate 5-dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
Length = 308
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN H+ + +Y+P + D+L++ + ++S
Sbjct: 12 ITGKTKIMGVIGYPVEHSLSPLMHNAALHHLGLDYVYLPFPIAPDNLQQAIAGFASIGVV 71
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+A++ E+ P+AQAI AVNT+IR + IG NTD I ++
Sbjct: 72 GFNVTIPHKQAIIPLLHEISPVAQAIGAVNTVIR--VGERWIGTNTDVAGFIAPLQTTYN 129
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ ++ + V+ G GGA RA+ G G
Sbjct: 130 QNWHE------------KKAVVIGNGGAARAVVAGCIQLG 157
>gi|289192372|ref|YP_003458313.1| 3-dehydroquinate dehydratase, type I [Methanocaldococcus sp.
FS406-22]
gi|288938822|gb|ADC69577.1| 3-dehydroquinate dehydratase, type I [Methanocaldococcus sp.
FS406-22]
Length = 220
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 8/222 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ SVE+ + + E AD+VE R+D + E I P +I
Sbjct: 1 MICLPVVEDSVEKAIKTA-EKYLEIADIVEFRIDMLKEVSE----EDIKKFAKYPCIITV 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH-QSGTRFIVSC 130
RP W GG ++G+ +RL + A + A YVD EL+ N ++ S T+ I+S
Sbjct: 56 RPDWEGGYWKGNNEERLNLIKKAIEYNAKYVDIELREEKNKEIVKFRDEIGSKTKIIISY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TPS+E L +V + + G DI K N ++ I ++++ II +GE
Sbjct: 116 HDFEKTPSKEKLVDVVEKALSIG-DIAKFATMANSKEDVLNILEVINKYPGKIIGIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKV 231
+G ++++L F L + S KG + G V++L++ +K+
Sbjct: 175 KGKLTRILGVYFGSILTFASYKGKSSAPGQVDVDTLKEIWKL 216
>gi|301094292|ref|XP_002896252.1| pentafunctional AROM polypeptide, putative [Phytophthora infestans
T30-4]
gi|262109647|gb|EEY67699.1| pentafunctional AROM polypeptide, putative [Phytophthora infestans
T30-4]
Length = 1548
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 173/390 (44%), Gaps = 39/390 (10%)
Query: 34 AEGADVVEIRLDCINNFQPGK----DLEIILTKKPLPVLIVYRPKWAGGLY-EGDEH--K 86
++GAD +E+R+D + + K + ++ + LP++ R K GG + +G+EH K
Sbjct: 1040 SKGADALELRVDLLKYAEDTKFVAAQVALLRSLSTLPIIFTVRSKVQGGAFPDGEEHEKK 1099
Query: 87 RLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLV 146
E L L LG ++VD E S +Q +H+ + I S + + SE + +
Sbjct: 1100 MFELLQLGVRLGCEFVDME-TCWSRKAREQLLAHRHRSAIISSFHAVQKPTSEAEAKAIF 1158
Query: 147 SRMQATG-ADIIKLV---FSVND---ITEIARIFQLLSHCQVPIIAYSVGERG----LVS 195
+ G I+K+V +S D + +A+ F +PII+ E G +++
Sbjct: 1159 RECYSQGRVQIVKVVVKAYSPVDALMVDRVAKDFASAWQQHMPIISLCTTEAGKLTRVLN 1218
Query: 196 QLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPI 255
+ L+P + L + G L + + +LR+ + + F L P+ S P
Sbjct: 1219 RTLTPVTHPLLPAAAAPGQ--LSIEEIMTLRKQLGL----LPAREFFLFGSPIQKSPSPA 1272
Query: 256 LHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD--FAGFSVGFPYKEAVMKFCDEVH 311
+HN F + ++ D D+ + P+ F G SV P+K +M+ DE+
Sbjct: 1273 MHNAGFESTSLASLFTYGLHDTTDVVEIVKRMQVPNTNFGGGSVTIPFKVDIMEHLDELS 1332
Query: 312 PLAQAIAAVNTIIRRPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
P A+AI AVNT++R+ +G G NTD + I + T S P
Sbjct: 1333 PAARAIGAVNTVMRQDRNGSPYWKGDNTDWLGILRPITKRL-------ATLSVKKPAHEL 1385
Query: 370 MFVLAGAGGAGRALAFGAKSRG-ARVVIFD 398
++ GAGG A ++ + G ++ +F+
Sbjct: 1386 TALVVGAGGTSMAASYAMRQLGVGKLFVFN 1415
>gi|389742773|gb|EIM83959.1| Pentafunctional AroM protein [Stereum hirsutum FP-91666 SS1]
Length = 1619
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 182/430 (42%), Gaps = 61/430 (14%)
Query: 5 NITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINN---------FQP--- 52
N+T+ L V L+ + A GAD +E+R+D + + + P
Sbjct: 1084 NVTRGKRSYFLSLTFPDVTPALAQLETITA-GADAIELRVDLLRSPKDFDHVGAYVPPAA 1142
Query: 53 --GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEALHLAEDLGADYVDFEL--- 106
+ + K LP++ R GGL+ K E LA LG +Y+D E+
Sbjct: 1143 YVTDQISALRQKTSLPIVFTARTVSQGGLFPDSSVKEAFELFDLALRLGVEYIDVEISWP 1202
Query: 107 -KVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVND 165
K +++ ++ S + S + T +D L + T DI+K+V N
Sbjct: 1203 EKKIRDLVSRKGHSQIIASWHDWSGRMKWNTQEVKDKYDLAN----TFGDIVKIVGKANS 1258
Query: 166 ITEIARIFQLLSHCQV-----PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLP 220
+ + + +S P++A ++G G +S++L+ F+ + + L P P
Sbjct: 1259 LQDNLDLHAFVSKVTAALDSKPVLAINMGVEGQLSRILNTTFS-PITHPLL---PSKAAP 1314
Query: 221 TVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDL 278
S + ++ +K F + P+ HS P LHN F+ + + Y + ++
Sbjct: 1315 GQLSFAEIQSALYLMGQLPSKKFYIFGTPIAHSPSPTLHNTGFKLLGFPHNYEILETTEV 1374
Query: 279 -KKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR-RPSDGK--LIG 334
+ T +SPDF G SV P+K +M D++ P A+AI AVNTII S+G L G
Sbjct: 1375 DSQVLVTITSPDFGGASVTIPFKRDIMAHLDQLSPEAEAIGAVNTIIPVYKSNGSHILYG 1434
Query: 335 YNTDCEASITAIEDAIKERGYKNGTASFGSPLAG-----RMFVLAGAGGAGRALAFGAKS 389
NTD +K +AS S L + ++ GAGG RA + +
Sbjct: 1435 DNTD----------------WKGISASIRSRLPAIVHKVEVGLVIGAGGTSRAAIYALHA 1478
Query: 390 RGA-RVVIFD 398
GA ++ IF+
Sbjct: 1479 LGAKKIYIFN 1488
>gi|260943265|ref|XP_002615931.1| hypothetical protein CLUG_04813 [Clavispora lusitaniae ATCC 42720]
gi|327507657|sp|C4Y9D5.1|ARO1_CLAL4 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238851221|gb|EEQ40685.1| hypothetical protein CLUG_04813 [Clavispora lusitaniae ATCC 42720]
Length = 1568
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 185/400 (46%), Gaps = 41/400 (10%)
Query: 11 TMICAPL--MAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG--KDLEIILTK-KPL 65
++ C+ L +A+++E +++ G + +E+R+D + ++ P D +L K L
Sbjct: 1056 SLACSDLNDIAENLEDIVA--------GCEAIELRVDLLKDYSPSFVADQTAVLRKFVNL 1107
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
P++ R K GG + ++ + LE L +L LG DY+D +L + + K ++ T
Sbjct: 1108 PIIYTIRTKGQGGNFPDEDVQALEQLSYLGIKLGVDYLDVQLSNSEKFV-KSIIEKKAFT 1166
Query: 125 RFIVSCNLDCE----TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQL-LSHC 179
+ I++ ++D T +E D Y ++ + AD+I+LV + + + Q +H
Sbjct: 1167 K-IIATHIDLAGLPWTRAEWDNKY--NQGISLNADVIQLVGFAHAFQDNIDLEQFRANHT 1223
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTK 239
P+IA++ GE G +S++L+ + L G TV + + + E +
Sbjct: 1224 ITPLIAFNAGEHGKLSRVLNRTLT-PVTSELLSNVSGNGQLTVGEINRCFS-EIGGLSRR 1281
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFS-TYSSPDFAGFSVGFP 298
F ++ P+ HS+ P LH + +N + D +K + + P F G +V P
Sbjct: 1282 NFYIVGNPISHSRSPQLHTAGYEKLNLPHRFSKFETDYAQKVYEEVMTKPGFGGLAVTIP 1341
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSD---GKLIGYNTDCEASITAIEDAIKERGY 355
K +MK+ E+ A+ I AVNT+ P D GK G NTD I +
Sbjct: 1342 LKLDIMKYVSELSESAKIIGAVNTVT--PLDGQPGKFYGDNTDWY--------GITQSFV 1391
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
++G SFG+ + ++ G GG RA AF G + +
Sbjct: 1392 RHGVPSFGN--SSVNGMVVGGGGTSRAAAFALHQMGCKKI 1429
>gi|296413789|ref|XP_002836591.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630419|emb|CAZ80782.1| unnamed protein product [Tuber melanosporum]
Length = 1554
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 171/379 (45%), Gaps = 40/379 (10%)
Query: 36 GADVVEIRLDCINN-------FQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + P + L ++ K LPV+ R K GG + ++H
Sbjct: 1057 GSDAVEVRIDLLIDPTDSNGVATPAFVSEQLAVLRGKTQLPVVFTIRTKSQGGKFPDEDH 1116
Query: 86 KRLEALHLAE-DLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+R L+LA +G +Y+D E +L K S G I++ + D
Sbjct: 1117 QRALELYLAGIRMGLEYIDLETTWPVALLEKVTSG--KGYSKIIASHHDLGGDLCWRNAS 1174
Query: 145 LVSRMQAT--GADIIKLV---FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLL- 198
+S+ T D+IKL+ S+ D ++ + + + +IA ++GE+G +S++L
Sbjct: 1175 WISKFNMTLKYGDVIKLIGQAKSIQDNYDLENFRKYAATHETRMIALNMGEKGKLSRILN 1234
Query: 199 ---SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPI 255
+P + AL + + G L TVE + Q + + +TK F + P+ HS+ P
Sbjct: 1235 TFLTPVTHPALPFKAAPGQ----LSTVE-IHQALSLMGM-LETKKFYIFGTPLSHSRSPA 1288
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
LHN F+ + Y D+ ++ +F G SV P+K +++ + AQ
Sbjct: 1289 LHNTLFQSLGLPHTYHLFESADVSATKEIMNTENFGGASVTIPHKISIIPLLSSISAHAQ 1348
Query: 316 AIAAVNTIIR-RPSDG--KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFV 372
AI AVNT+I DG +L G N D I+++++ G T G A + +
Sbjct: 1349 AIGAVNTVIPVTTEDGTRRLTGDNFDW----VGIQNSLRIGG---ATEPEGHSTATALVI 1401
Query: 373 LAGAGGAGRALAFGAKSRG 391
GAGG RA + G
Sbjct: 1402 --GAGGTSRAAVYALHMMG 1418
>gi|164655385|ref|XP_001728822.1| hypothetical protein MGL_3989 [Malassezia globosa CBS 7966]
gi|327507662|sp|A8QCB2.1|ARO1_MALGO RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|159102708|gb|EDP41608.1| hypothetical protein MGL_3989 [Malassezia globosa CBS 7966]
Length = 1611
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 180/411 (43%), Gaps = 60/411 (14%)
Query: 22 VEQVLSNMYQAKAEGADVVEIRLDCIN-NFQPGKD-----LEIILTKKPLPVLIVYRPKW 75
V+ S + A A G DV+E+R+D ++ + QP D + ++ LP+L R
Sbjct: 1098 VQDAWSILDHASA-GVDVLELRVDLLHADGQPSIDDVREQVALLRQYTSLPILYTVRSVS 1156
Query: 76 AGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN--- 131
GG + ++ AL L +G +YVD EL S+ + ++ + + TR + S +
Sbjct: 1157 QGGRLPDEANEAYFALTRLGLRMGCEYVDIELTRPSDGI-EELAQAKGQTRIVASFHDTS 1215
Query: 132 --LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQ-----------LLSH 178
+ P+ + L +R G DI KLV AR +Q +
Sbjct: 1216 GTMHWMAPA---MRRLYTRACVLG-DIAKLV-------GFARTWQDSLDLESFRTRVAQE 1264
Query: 179 CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA-- 236
P+IA ++ G +S++++P + + +L PV P S+R + H+
Sbjct: 1265 APFPLIAINMQAAGQLSRIVNPLLT-PVTHPAL---PVPAAPGQMSVRDIHHARHLLGLL 1320
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSV 295
+ F L P+ HS+ P++HN F + +Y D + + DF G SV
Sbjct: 1321 PKRHFFLFGSPITHSQSPLIHNTAFELLGLPHVYARHETDSVDASVEALVRAGDFGGASV 1380
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTII--RRPSDGK--LIGYNTDCEASITAIEDAIK 351
P+K ++M+ D V P AQ I AVNTI+ R + G L G NTD A + + K
Sbjct: 1381 TIPHKLSIMQLLDSVSPHAQVIGAVNTIVPHRDETTGHMALHGENTDWRAIVDLVA---K 1437
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF 401
G + + ++ GAGG+ RA + GA R+++++ F
Sbjct: 1438 HDGGRTRACT---------ALVIGAGGSARAALYAMHKLGASRILLYNRTF 1479
>gi|312865146|ref|ZP_07725374.1| shikimate dehydrogenase [Streptococcus downei F0415]
gi|311099257|gb|EFQ57473.1| shikimate dehydrogenase [Streptococcus downei F0415]
Length = 288
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ ++++P+ HS P +HN F NG+YV + +DL++ D
Sbjct: 2 QIDGHTRMAAVVARPIRHSISPFIHNYAFDASGINGVYVAWDIPEEDLEESVQNVRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+ V+ F DE+ A+ I AVNT++ R G+LIGYNTD A+E
Sbjct: 62 FGINISMPYKQVVIPFLDELDQAAELIGAVNTVVNR--QGRLIGYNTDGYGFFKALE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFD 398
K+ G+ +AG+ + G GGA +L A GA+ + IF+
Sbjct: 117 KDDGFT---------IAGKTMTILGGGGAATSLIVQAALDGAKKINIFN 156
>gi|398409232|ref|XP_003856081.1| AROM pentafunctional protein, ARO1 [Zymoseptoria tritici IPO323]
gi|339475966|gb|EGP91057.1| AROM pentafunctional protein, ARO1 [Zymoseptoria tritici IPO323]
Length = 1603
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 173/406 (42%), Gaps = 52/406 (12%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL----------EIILTKKPLP 66
L A +++ VL + + G+D +E+R+D + + L ++ LP
Sbjct: 1076 LTAPTIQSVLPLLPEVTM-GSDAIELRVDLLVDPAASDGLPRPEFLKDQVSLLRASSRLP 1134
Query: 67 VLIVYRPKWAGGLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
++ R GG + +GD + + +G D+VD EL + K+Y +
Sbjct: 1135 LIFTLRSVSQGGRFPDGDVERAVALYREGLRMGFDFVDLELTSPPEV--KEYVLNHRKMC 1192
Query: 126 FIVSCNLDCETP-----SEEDLGYLVSRMQATGADIIKLV-----FSVNDITEIARIFQL 175
I++ + D + D L + + G DI+KLV ND +I + +
Sbjct: 1193 IIIASHHDPKATLSWANGAADWKPLFASALSYG-DIVKLVGVAKTTDDNDDLKIFKKWVA 1251
Query: 176 LSHCQVPIIAYSVGERGLVSQL----LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKV 231
+H P+IA ++ E G S++ ++P + A++ + G LP + R +
Sbjct: 1252 KAHPDTPVIAINMAEAGKSSRVFNGFMTPVSHPAMLAKAAPGQ----LPAADIRRVLGLM 1307
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA 291
+I + K F + KPV HS+ P LHN F+ Y D +PDF
Sbjct: 1308 SYI--EPKKFCIFGKPVQHSRSPALHNALFQLTGLPHAYGIHETDRAADLVDIIRAPDFG 1365
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPS----DGK--LIGYNTDCEASITA 345
G SV P K VM D V A+ I AVNT++ PS GK L G+NTD + I +
Sbjct: 1366 GASVTIPLKLDVMPLLDVVDSAAKTIGAVNTVV--PSLDTATGKTILTGHNTDWQGIILS 1423
Query: 346 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ +A G K G AG ++ G GG RA + K+ G
Sbjct: 1424 LRNA----GSK--VPGHGVQQAG---MVVGGGGTARAAIYALKNMG 1460
>gi|331220665|ref|XP_003323008.1| hypothetical protein PGTG_04545 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309301998|gb|EFP78589.1| hypothetical protein PGTG_04545 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1482
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 178/426 (41%), Gaps = 52/426 (12%)
Query: 6 ITKNTTMICA--PLMAQSVEQVLSNM--YQAKAEGADVVEIRLDCINNFQPG-------- 53
+ +NT +C P ++ E+ +++ ++ G D VE+R+D ++
Sbjct: 921 VPRNTHFLCLTFPSLSPCREEDKTSLDRFEELTIGCDAVELRVDLLSTSGKAPTSPSIPP 980
Query: 54 -----KDLEIILTKKPLPVLIVYRPKWAGGLY-EGDEHKRLEALHLAEDLGADYVDFELK 107
K + + LP++ R GG++ +G + + + G +YVD EL
Sbjct: 981 TEFVVKQVAALRRLTTLPIIYTVRTCSQGGMFPDGQPEEWCKLAAMGFRTGCEYVDIELG 1040
Query: 108 VASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA--DIIKLVFSVND 165
++ ++ Q G I++ D + D ++ R A D++KLV D
Sbjct: 1041 LSPE--QQKALCSQKGHSKIIASYHDFSGRLKWDSSEMIQRYHELKAYGDMVKLVSRAAD 1098
Query: 166 -------ITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLG 218
+ E + L + +I ++G G +S++LSP + + L G P
Sbjct: 1099 GLEDNLAMLEFRKKHATLQKDRQSLITINMGRSGQMSRILSPVLS-PTTHRLLPGPP--A 1155
Query: 219 LPTVESLRQTYKVEHINADT--KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMF-- 274
P S RQ + + K F L P+G S+ P++H F + G
Sbjct: 1156 APGQLSFRQIQTAQGLLGQIIPKQFWLFGAPIGQSRSPLIHGTGFDTLGLEGYRYQKCET 1215
Query: 275 --VDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII---RRPSD 329
V D ++S DF G SV P K ++K+ D++ P AQA+ AVNTI+ +R
Sbjct: 1216 SSVTDSTVLEKIHAS-DFGGASVTIPLKVEIIKYLDQLTPDAQAVGAVNTIVPVSQRDGK 1274
Query: 330 GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF----VLAGAGGAGRALAF 385
KL+G NTD EA IE + + + G G++ V+ GAGG RA +
Sbjct: 1275 IKLLGANTDWEAIKMKIEANLPAQ------QALGLITPGQLVRAAGVVIGAGGTARAAVY 1328
Query: 386 GAKSRG 391
S G
Sbjct: 1329 ALHSLG 1334
>gi|350271939|ref|YP_004883247.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
gi|348596781|dbj|BAL00742.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
Length = 286
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSS 287
+ +I DTK+ GL+ P+ S L N + + Y+P+ V D L +
Sbjct: 1 MHYITVDTKMIGLLGTPLRQSVSYKLQNRVYEQAGLDYFYLPIEVSTEDRLPAVVEGIRA 60
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+FAGF++ PYKE ++K+ DE L + A NT+ R DGKLIGYNTD + ++E
Sbjct: 61 MNFAGFAITKPYKETILKYLDERDDLVTKMGACNTVAVR--DGKLIGYNTDGIGCVRSLE 118
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + G+ F GAGGA RA+ F RGA+ ++
Sbjct: 119 ------------VDGGLDIKGKTFFSFGAGGAARAVCFELACRGAKQIV 155
>gi|297616585|ref|YP_003701744.1| shikimate 5-dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
gi|297144422|gb|ADI01179.1| shikimate 5-dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
Length = 291
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDF 290
+ ADT+V G+I P+GHS P +HN H+ N +YVP VD+ LK+ +
Sbjct: 2 QVKADTRVLGIIGNPLGHSLSPQMHNRALEHLRLNYVYVPFVVDNHALKEAVDGIRALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KEAV+ + D++ A+ A N + + GKL+GYNTD + +++
Sbjct: 62 DGVNVTIPFKEAVIGYLDDLSEEARWCGAANVV--KNCGGKLVGYNTDGAGFMASLQ--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
E+G G G+ V+ GAGGA RA+ +
Sbjct: 117 -EQGVLPG---------GQRVVVLGAGGAARAITY 141
>gi|17229549|ref|NP_486097.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7120]
gi|24211460|sp|Q8YVC1.1|AROE_ANASP RecName: Full=Shikimate dehydrogenase
gi|17131148|dbj|BAB73756.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7120]
Length = 289
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN + + +Y+P + D+L+ + ++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 62 GFSVTIPHKQAIIPLLSEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
R + A V+ G GGA RA+ G G
Sbjct: 120 -RDWSQQIA-----------VILGNGGAARAVVAGCYQLG 147
>gi|345562790|gb|EGX45803.1| hypothetical protein AOL_s00117g8 [Arthrobotrys oligospora ATCC
24927]
Length = 1582
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 168/389 (43%), Gaps = 50/389 (12%)
Query: 28 NMYQAKAEGADVVEIRLDCI-----NNFQPG-----KDLEIILTKKPLPVLIVYRPKWAG 77
+ + EG D VE+R+D + N P + + + +K LP++ R G
Sbjct: 1067 QIIEKSVEGCDAVELRVDLLLDPSQKNGIPSLKYLNEQVAYLRSKTKLPLIFTIRTVSQG 1126
Query: 78 GLYEGDEHKRLEALHL-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
G Y + E L++ A +G +Y+D E+ ++L ++ +S + T+ I S + +
Sbjct: 1127 GRYPDSAIEEAEKLYVEALKMGFEYLDLEMTWPEDLL-QRITSAKGFTQIIASHHDTKQV 1185
Query: 137 PSEEDLGYL-VSRMQATGADIIKLV---------FSVNDITEIARIFQLLSHCQVPIIAY 186
S D ++ V DI+KLV +S+ E A +S +V +IA
Sbjct: 1186 HSWADGSWIPVFNKAVAHGDIVKLVGIARSLADNYSLEKFREWA-----VSTQKVKLIAI 1240
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT--KVFGLI 244
++ +G +S++L NG L S P P S+ + + + + K F L
Sbjct: 1241 NMTSKGQLSRVL----NGFLTPVSHPALPFKAAPGQLSITEINRALTLLGEITPKQFYLF 1296
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
KPV HS+ P LHN F Y + D + + DF G SV P K +
Sbjct: 1297 GKPVSHSRSPALHNSLFGRFGLPHNYDLLETDIAEDTLGKIRADDFGGASVTIPLKLSYF 1356
Query: 305 KFCDEVHPLAQAIAAVNTI--IRRPSDGKLI--GYNTDCEASITAIEDAIKERGYKNGTA 360
+ DE+ A+AI AVNTI I +GK I G NTD I+ A++ G+ N
Sbjct: 1357 DYLDEISDEARAIGAVNTIYPIGLADNGKKILRGDNTDW----LGIKMALESGGFAN--- 1409
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
+G ++ GAGG RA + S
Sbjct: 1410 ------SGGPGLVIGAGGTSRAAVYALAS 1432
>gi|239827796|ref|YP_002950420.1| shikimate 5-dehydrogenase [Geobacillus sp. WCH70]
gi|259585283|sp|C5D4W2.1|AROE_GEOSW RecName: Full=Shikimate dehydrogenase
gi|239808089|gb|ACS25154.1| shikimate 5-dehydrogenase [Geobacillus sp. WCH70]
Length = 277
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++ L PV HS PI+HN F+++N Y V+ LK + + +G +V
Sbjct: 3 KLYALFGCPVHHSLSPIMHNDAFQNMNIAAHYHAFHVEPERLKDAIAGVRALGISGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AVM DEV P A+ I AVNTI+ R +G+LIGYNTD + A+E+ I
Sbjct: 63 IPHKTAVMPLLDEVDPTARRIGAVNTIVNR--NGRLIGYNTDGPGYVRALEEEIN----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ + +L GAGGA R + RGA+ +
Sbjct: 116 -------VDIKEKRILLIGAGGAARGIYVSLADRGAKQI 147
>gi|434403542|ref|YP_007146427.1| shikimate dehydrogenase [Cylindrospermum stagnale PCC 7417]
gi|428257797|gb|AFZ23747.1| shikimate dehydrogenase [Cylindrospermum stagnale PCC 7417]
Length = 294
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN + + +Y+P+ + +L+ + +++
Sbjct: 7 ITGKTKLLGVIGHPVEHSLSPVMHNVALGEMGLDYVYLPLPIAPQNLEIAIAGFAAIGVV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ DGK +G NTD E I ++
Sbjct: 67 GFSVTIPHKQAILPLLSEITPVAQAIGAVNTVTRQ--DGKWVGTNTDVEGFIAPLQ---- 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ ++ V+ G GGA R++ G G
Sbjct: 121 --------TTYHQDWRQKVAVILGNGGAARSVVAGCIQLG 152
>gi|29726767|pdb|1NVT|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or
Mj1084) In Complex With Nadp+
gi|29726768|pdb|1NVT|B Chain B, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or
Mj1084) In Complex With Nadp+
Length = 287
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 7 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ AQ I AVNTI + DGK IGYNTD + A+E+ I
Sbjct: 67 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEIG 124
Query: 352 ERGYKN 357
KN
Sbjct: 125 RVKDKN 130
>gi|15669272|ref|NP_248077.1| shikimate 5-dehydrogenase [Methanocaldococcus jannaschii DSM 2661]
gi|2492956|sp|Q58484.1|AROE_METJA RecName: Full=Shikimate dehydrogenase
gi|1591730|gb|AAB99086.1| shikimate 5-dehydrogenase (aroE) [Methanocaldococcus jannaschii DSM
2661]
Length = 282
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 2 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ AQ I AVNTI + DGK IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEIG 119
Query: 352 ERGYKN 357
KN
Sbjct: 120 RVKDKN 125
>gi|421452028|ref|ZP_15901389.1| Shikimate 5-dehydrogenase [Streptococcus salivarius K12]
gi|400182459|gb|EJO16721.1| Shikimate 5-dehydrogenase [Streptococcus salivarius K12]
Length = 285
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P Q I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAVQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
SP + +L GAGGA +A+ A GA+ V
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKV 149
>gi|3834343|emb|CAA28836.1| arom polypeptide [Emericella nidulans]
Length = 1586
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 27/336 (8%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + NN P D L + ++ LP++ R + GG + + H
Sbjct: 1075 GSDAVELRVDLLKDPASNNDIPSVDYVVEQLSFLRSRVTLPIIFTIRTQSQGGRFPDNAH 1134
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
LE LA G ++VD ++ ++L + + + ++ I S + S ++ +
Sbjct: 1135 DAALELYRLAFRSGCEFVDLDIAFPEDML-RAVTEMKGFSKIIASHHDPKGELSWANMSW 1193
Query: 145 LVSRMQATG-ADIIKLV---FSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLLS 199
+ +A DIIKLV +++D T + + + VP+IA ++G++G +S++L
Sbjct: 1194 IKFYNKALEYGDIIKLVGVARNIDDNTALRKFKNWAAEAHDVPLIAINMGDQGQLSRIL- 1252
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTK--VFGLISKPVGHSKGPILH 257
NG + S P P S + K + + K F + P+ S+ P LH
Sbjct: 1253 ---NGFMTPVSHPSLPFKAAPGQLSATEIRKGLSLMGEIKPKKFAIFGSPISQSRSPALH 1309
Query: 258 NPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317
N F V Y + + + SPDF G K +M DEV A+ I
Sbjct: 1310 NTLFAQVGLPHNYTRLETTNAQDVQEFIRSPDFGGAFRNNSLKLDIMPLLDEVAAEAEII 1369
Query: 318 AAVNTIIR----RPSDGKLIGYNTDCEASITAIEDA 349
AVNTII + + +L+G NTD + I ++ A
Sbjct: 1370 GAVNTIIPVSTGKNTPSRLVGRNTDWQGMILSLRKA 1405
>gi|373464004|ref|ZP_09555572.1| shikimate dehydrogenase [Lactobacillus kisonensis F0435]
gi|371763400|gb|EHO51877.1| shikimate dehydrogenase [Lactobacillus kisonensis F0435]
Length = 289
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 17/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ TK+FGL++ P HS P++HN +F+ NG Y+ V D L + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFKITGINGAYLAFDVTSDGLADSLAAMRAMGIG 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P K V+ DEV P A+ + AVNT+I R +G L G +TD + + DA+K
Sbjct: 62 GFNLSMPLKTDVIPLLDEVTPRAERLQAVNTVINR--NGHLTGDSTDGQGFV----DALK 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+R + LAG + GAGGAGR++ A G
Sbjct: 116 QRAIE---------LAGATLTVLGAGGAGRSIISAAVDAG 146
>gi|225175008|ref|ZP_03729005.1| shikimate 5-dehydrogenase [Dethiobacter alkaliphilus AHT 1]
gi|225169648|gb|EEG78445.1| shikimate 5-dehydrogenase [Dethiobacter alkaliphilus AHT 1]
Length = 277
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ TK+ G+ PV HS P +HN F H++ + +YVP V DD+K+ + + +
Sbjct: 3 ISGRTKITGIFGDPVEHSLSPAMHNAAFAHLDLDYVYVPFHVNTDDIKRAVGSIKALNIT 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K+ V+ F DE+ A +AVNTI+ + DG L GYNTD T D++K
Sbjct: 63 GVNVTVPHKQDVIPFLDEIDKTASRCSAVNTIVNK--DGILTGYNTDG----TGFIDSLK 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
E G+ + V+ GAGG+ RA+
Sbjct: 117 EYGFNP---------KDKEVVIIGAGGSARAI 139
>gi|145577901|gb|ABP82669.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 16/147 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K ++MK+ D
Sbjct: 1 SLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVTTPHKVSIMKYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + +++ KE PL
Sbjct: 61 EIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE------------PLYQ 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV 395
+ +L GAGGA RA+ F G + +
Sbjct: 107 KRILLLGAGGACRAIYFSLADAGVKEI 133
>gi|340399205|ref|YP_004728230.1| shikimate dehydrogenase [Streptococcus salivarius CCHSS3]
gi|338743198|emb|CCB93706.1| shikimate dehydrogenase [Streptococcus salivarius CCHSS3]
Length = 285
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD ++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKNF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
SP + +L GAGGA +A+ A GA+ V
Sbjct: 119 -------------SPKDAHLMIL-GAGGAAKAIVTQAVLDGAKKV 149
>gi|302390016|ref|YP_003825837.1| shikimate 5-dehydrogenase [Thermosediminibacter oceani DSM 16646]
gi|302200644|gb|ADL08214.1| shikimate 5-dehydrogenase [Thermosediminibacter oceani DSM 16646]
Length = 288
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I DTKV G+I PV HS P++HN F + + +YVP V ++LK+ + +
Sbjct: 2 EIKGDTKVLGIIGYPVDHSLSPVIHNAAFEELKLSCVYVPFPVKPENLKEAIEGIRALNV 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+K VM + DE+ A I AVNTI+ + G+L+G+NTD + +DA+
Sbjct: 62 GGVNVTIPHKVKVMNYLDEISKEAAVIGAVNTIVNK--GGRLVGFNTDA----SGFKDAL 115
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
Y+ G L G+ ++ GAGGA RA+ GA +I
Sbjct: 116 ----YRIA----GVDLTGKRVLVLGAGGAARAVVGQCLLSGASSII 153
>gi|119511936|ref|ZP_01631034.1| shikimate 5-dehydrogenase [Nodularia spumigena CCY9414]
gi|119463432|gb|EAW44371.1| shikimate 5-dehydrogenase [Nodularia spumigena CCY9414]
Length = 294
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ G+I PV HS P++HN + + IY+P + ++L+ + ++ +
Sbjct: 6 ITGKTQLLGVIGHPVEHSLSPVMHNAALAQLGLDYIYLPFPIKPENLEVAIAGLAAINVV 65
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A+M E+ P AQAI AVNT+ R+ + + +G NTD E I ++
Sbjct: 66 GFSVTIPHKQAIMPLLSEISPTAQAIGAVNTVSRQ--NNQWVGTNTDIEGFIAPLQ---- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ + ++ V+ G GGA RA+ G + G
Sbjct: 120 --------TTYQQDWSQKIAVILGHGGAARAVVAGCQQLG 151
>gi|257898584|ref|ZP_05678237.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com15]
gi|257836496|gb|EEV61570.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com15]
Length = 284
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA+ ++
Sbjct: 118 -----------GISVKKKKMTLLGAGGAAKAVTVQAALDGAKEIV 151
>gi|170096704|ref|XP_001879572.1| predicted protein [Laccaria bicolor S238N-H82]
gi|327507659|sp|B0D6H2.1|ARO1_LACBS RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|164645940|gb|EDR10187.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1606
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 161/387 (41%), Gaps = 62/387 (16%)
Query: 35 EGADVVEIRLDCINNFQPGKDLEIILTKKP-----------------LPVLIVYRPKWAG 77
+G D +E+R+D + + KD + I P LP++ R + G
Sbjct: 1088 QGVDAIELRVDLL---RASKDYDSIEYSIPTLAYVSSQVAALRRVTSLPIVFTVRTQSQG 1144
Query: 78 GLY-EGDEHKRLEALHLAEDLGADYVDFELKVASN----ILGKQYSSHQSGTRFIVSCNL 132
G + + E + +E L LA LG +YVD E+ ++ ++ + SSH + S N+
Sbjct: 1145 GSFPDAAEKEAVELLKLALRLGVEYVDVEISLSEKKIKELVSLKGSSHMIASWHDWSGNM 1204
Query: 133 DCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYS 187
+ P ++ +R DIIK+V N I + ++ +S P IA +
Sbjct: 1205 IWDGPVVKEKYDAAARF----GDIIKIVGKANSIQDNFTLYNFVSKVNSTAGSKPFIAIN 1260
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFGLIS 245
+G G +S++L N L S P P S +Q H+ + F L
Sbjct: 1261 MGLEGQMSRVL----NSTLSPVSHPLLPSKAAPGQLSFKQIQNALHLLGLLPAQRFYLFG 1316
Query: 246 KPVGHSKGPILHNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
P+ HS P LHN F + +Y + +++K + F G SV PYK
Sbjct: 1317 TPIAHSMSPTLHNTGFEILGLPHHYELLETKEVAEEIKIAIGDSA---FGGASVTIPYKL 1373
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRP--SDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
V+ D++ P A+AI AVNTII R S L+G NTD I + + +
Sbjct: 1374 DVIPLLDKLSPAAEAIGAVNTIIPRTTGSGRMLVGDNTDWLGIKACITEQLSSK------ 1427
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFG 386
P+ + + GAGG RA +
Sbjct: 1428 -----PIHAALVI--GAGGTARAAIYA 1447
>gi|402219596|gb|EJT99669.1| Pentafunctional AroM protein [Dacryopinax sp. DJM-731 SS1]
Length = 1629
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 175/392 (44%), Gaps = 64/392 (16%)
Query: 36 GADVVEIRLDCIN---------NFQP----GKDLEIILTKKPLPVLIVYRPKWAGGLY-E 81
G D +E+R+D ++ + P + + + LP++ R GG + +
Sbjct: 1126 GVDALELRVDLLSPTGSPVERPSVPPSTYVATQIAALRQRTTLPIVFTVRTASQGGQFPD 1185
Query: 82 GDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN--------LD 133
+ + ++ LA LG +Y+D E+ + + + S + + I S + L
Sbjct: 1186 TAQQEAVKLFELALRLGCEYLDVEISWSEEQI-RHIISQKGHSHLIASWHDWTGAMKWLS 1244
Query: 134 CETPSEEDLGYLVSRMQATGADIIKLVFSVNDITE---IARIFQLLSHCQVPIIAYSVGE 190
E + +L Y + DIIKLV + D + + + ++ + P++A ++GE
Sbjct: 1245 PEVRQKYNLAYEL-------GDIIKLVGTARDQADNLDLQLFVRSIAAGRKPMLAINMGE 1297
Query: 191 RGLVSQLL----SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK 246
+G +S++L SP + L + G L P ++ R + + H+ + F L
Sbjct: 1298 KGKLSRILNFVFSPVTHPLLPSRAAPGQ--LTFPEIQ--RALHLIGHLPKEQ--FYLFGT 1351
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
P+ HS P LHN F + Y + FVD+ + + ++P+F G SV P+K A+
Sbjct: 1352 PISHSMSPTLHNTAFSALGLPHRYDLLETDFVDN--RITAAVAAPNFGGASVTIPHKVAI 1409
Query: 304 MKFCDEVHPLAQAIAAVNTI--IRRPSDG--KLIGYNTDCEASITAIEDAIKERGYKNGT 359
+ D + AQ I AVNTI IRRP DG +L+G NTD A I + +K
Sbjct: 1410 ISQLDCLSEEAQVIGAVNTIIPIRRP-DGIRELLGDNTDWAAMHCIIINNLKNV------ 1462
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
SP R V+ GAGGA RA + G
Sbjct: 1463 ----SPGGARGLVI-GAGGASRAAVYALHRAG 1489
>gi|227551431|ref|ZP_03981480.1| shikimate dehydrogenase [Enterococcus faecium TX1330]
gi|257895956|ref|ZP_05675609.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com12]
gi|227179440|gb|EEI60412.1| shikimate dehydrogenase [Enterococcus faecium TX1330]
gi|257832521|gb|EEV58942.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com12]
Length = 284
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA+ ++
Sbjct: 118 -----------GISVKKKKVTLLGAGGAAKAVTVQAALDGAKEIV 151
>gi|430820141|ref|ZP_19438778.1| shikimate 5-dehydrogenase [Enterococcus faecium E0045]
gi|430439831|gb|ELA50141.1| shikimate 5-dehydrogenase [Enterococcus faecium E0045]
Length = 284
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIV 151
>gi|257887461|ref|ZP_05667114.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,141,733]
gi|293377413|ref|ZP_06623615.1| shikimate dehydrogenase [Enterococcus faecium PC4.1]
gi|293570466|ref|ZP_06681521.1| shikimate 5-dehydrogenase [Enterococcus faecium E980]
gi|424763558|ref|ZP_18191028.1| shikimate dehydrogenase [Enterococcus faecium TX1337RF]
gi|430841215|ref|ZP_19459134.1| shikimate 5-dehydrogenase [Enterococcus faecium E1007]
gi|431035007|ref|ZP_19491884.1| shikimate 5-dehydrogenase [Enterococcus faecium E1590]
gi|431737780|ref|ZP_19526732.1| shikimate 5-dehydrogenase [Enterococcus faecium E1972]
gi|431751761|ref|ZP_19540448.1| shikimate 5-dehydrogenase [Enterococcus faecium E2620]
gi|431756603|ref|ZP_19545235.1| shikimate 5-dehydrogenase [Enterococcus faecium E3083]
gi|431761855|ref|ZP_19550417.1| shikimate 5-dehydrogenase [Enterococcus faecium E3548]
gi|257823515|gb|EEV50447.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,141,733]
gi|291609412|gb|EFF38679.1| shikimate 5-dehydrogenase [Enterococcus faecium E980]
gi|292643931|gb|EFF62039.1| shikimate dehydrogenase [Enterococcus faecium PC4.1]
gi|402422669|gb|EJV54899.1| shikimate dehydrogenase [Enterococcus faecium TX1337RF]
gi|430493991|gb|ELA70241.1| shikimate 5-dehydrogenase [Enterococcus faecium E1007]
gi|430563722|gb|ELB02931.1| shikimate 5-dehydrogenase [Enterococcus faecium E1590]
gi|430598386|gb|ELB36127.1| shikimate 5-dehydrogenase [Enterococcus faecium E1972]
gi|430615055|gb|ELB52025.1| shikimate 5-dehydrogenase [Enterococcus faecium E2620]
gi|430620457|gb|ELB57259.1| shikimate 5-dehydrogenase [Enterococcus faecium E3083]
gi|430624547|gb|ELB61197.1| shikimate 5-dehydrogenase [Enterococcus faecium E3548]
Length = 284
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA+ ++
Sbjct: 118 -----------GISVKKKKVTLLGAGGAAKAVTVQAALDGAKEIV 151
>gi|256810969|ref|YP_003128338.1| 3-dehydroquinate dehydratase [Methanocaldococcus fervens AG86]
gi|256794169|gb|ACV24838.1| 3-dehydroquinate dehydratase, type I [Methanocaldococcus fervens
AG86]
Length = 220
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 8/222 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ +VE+ + + E AD+VE R+D + E I P +I
Sbjct: 1 MICLPVVEDNVEEAIKTA-KKYLEIADIVEFRVDMLKEVSE----EDIAEFAKYPSIITV 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH-QSGTRFIVSC 130
RP+W GG + G + +RL + A + A +VD EL+ N ++ S T+ I+S
Sbjct: 56 RPEWEGGYWRGSDEERLNLIKKAIECNAKFVDIELREEKNREIVKFRDEIGSKTKIIISY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TPS+E L +V + + G DI K N+ ++ I ++++ II +GE
Sbjct: 116 HDFEKTPSKEVLDDIVKKALSIG-DIAKFATMANNKEDVLNILEVINKYSGKIIGIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKV 231
G ++++L F L + S KG + G +E+L++ +K+
Sbjct: 175 NGKLTRILGVYFGSILTFASYKGKSSAPGQVDIETLKEIWKL 216
>gi|431071468|ref|ZP_19494439.1| shikimate 5-dehydrogenase [Enterococcus faecium E1604]
gi|431104340|ref|ZP_19497064.1| shikimate 5-dehydrogenase [Enterococcus faecium E1613]
gi|431582328|ref|ZP_19520277.1| shikimate 5-dehydrogenase [Enterococcus faecium E1861]
gi|431740200|ref|ZP_19529117.1| shikimate 5-dehydrogenase [Enterococcus faecium E2039]
gi|430567101|gb|ELB06187.1| shikimate 5-dehydrogenase [Enterococcus faecium E1604]
gi|430569928|gb|ELB08907.1| shikimate 5-dehydrogenase [Enterococcus faecium E1613]
gi|430594218|gb|ELB32188.1| shikimate 5-dehydrogenase [Enterococcus faecium E1861]
gi|430603736|gb|ELB41249.1| shikimate 5-dehydrogenase [Enterococcus faecium E2039]
Length = 284
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA+ ++
Sbjct: 118 -----------GISVKKKKMTLLGAGGAAKAVTVQAALDGAKEIV 151
>gi|430837903|ref|ZP_19455853.1| shikimate 5-dehydrogenase [Enterococcus faecium E0688]
gi|430858336|ref|ZP_19475964.1| shikimate 5-dehydrogenase [Enterococcus faecium E1552]
gi|431369954|ref|ZP_19509653.1| shikimate 5-dehydrogenase [Enterococcus faecium E1627]
gi|430492183|gb|ELA68597.1| shikimate 5-dehydrogenase [Enterococcus faecium E0688]
gi|430545545|gb|ELA85518.1| shikimate 5-dehydrogenase [Enterococcus faecium E1552]
gi|430583701|gb|ELB22059.1| shikimate 5-dehydrogenase [Enterococcus faecium E1627]
Length = 284
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESVRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIV 151
>gi|75909313|ref|YP_323609.1| shikimate 5-dehydrogenase [Anabaena variabilis ATCC 29413]
gi|123609023|sp|Q3M8H2.1|AROE_ANAVT RecName: Full=Shikimate dehydrogenase
gi|75703038|gb|ABA22714.1| shikimate dehydrogenase [Anabaena variabilis ATCC 29413]
Length = 289
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN + + +Y+P + D+L+ + ++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 62 GFSVTIPHKQAIIPLLAEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
R + A V+ G GGA RA+ G G
Sbjct: 120 -RDWSQQIA-----------VILGNGGAARAVVAGCYQLG 147
>gi|430822290|ref|ZP_19440869.1| shikimate 5-dehydrogenase [Enterococcus faecium E0120]
gi|430864786|ref|ZP_19480611.1| shikimate 5-dehydrogenase [Enterococcus faecium E1574]
gi|431743724|ref|ZP_19532600.1| shikimate 5-dehydrogenase [Enterococcus faecium E2071]
gi|430443348|gb|ELA53333.1| shikimate 5-dehydrogenase [Enterococcus faecium E0120]
gi|430553567|gb|ELA93253.1| shikimate 5-dehydrogenase [Enterococcus faecium E1574]
gi|430606513|gb|ELB43864.1| shikimate 5-dehydrogenase [Enterococcus faecium E2071]
Length = 284
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIV 151
>gi|337289037|ref|YP_004628509.1| Shikimate dehydrogenase [Thermodesulfobacterium sp. OPB45]
gi|334902775|gb|AEH23581.1| Shikimate dehydrogenase [Thermodesulfobacterium geofontis OPF15]
Length = 274
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 18/166 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+V+G+I PV HS PI+HN FR N +Y V D L K + + G SV
Sbjct: 3 EVYGIIGDPVSHSLSPIMHNLAFREKNIRAVYGAFRVSADQLAKAVEGIKALNIKGLSVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++++ DE+ +A I AVNT++ + +G L GYNTD I A E
Sbjct: 63 IPHKEKIIEYLDEIDEIAYEIGAVNTVLNK--EGILKGYNTDWIGVIKAFE--------- 111
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDF 401
G L + V+ GAGGA +A+ + KS+ ++ +++ F
Sbjct: 112 ----VNGVELRDKKIVVIGAGGASKAVIYALIKSKAKKIHVYNRTF 153
>gi|294616615|ref|ZP_06696391.1| shikimate 5-dehydrogenase [Enterococcus faecium E1636]
gi|430849862|ref|ZP_19467629.1| shikimate 5-dehydrogenase [Enterococcus faecium E1185]
gi|291590565|gb|EFF22298.1| shikimate 5-dehydrogenase [Enterococcus faecium E1636]
gi|430536557|gb|ELA76924.1| shikimate 5-dehydrogenase [Enterococcus faecium E1185]
Length = 284
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIV 151
>gi|418018195|ref|ZP_12657751.1| shikimate 5-dehydrogenase [Streptococcus salivarius M18]
gi|345527044|gb|EGX30355.1| shikimate 5-dehydrogenase [Streptococcus salivarius M18]
Length = 285
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + D
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ DG+LIG+NTD ++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVN--CDGRLIGHNTDGFGFFASLKNF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
SP + +L GAGGA +A+ A GA+ V
Sbjct: 119 -------------SPKDAHLMIL-GAGGAAKAIVTQAVLDGAKKV 149
>gi|431429706|ref|ZP_19512808.1| shikimate 5-dehydrogenase [Enterococcus faecium E1630]
gi|431759137|ref|ZP_19547752.1| shikimate 5-dehydrogenase [Enterococcus faecium E3346]
gi|430587940|gb|ELB26151.1| shikimate 5-dehydrogenase [Enterococcus faecium E1630]
gi|430626334|gb|ELB62910.1| shikimate 5-dehydrogenase [Enterococcus faecium E3346]
Length = 284
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTYDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMPSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA+ ++
Sbjct: 118 -----------GISVKKKKMTLLGAGGAAKAVTVQAALDGAKEIV 151
>gi|334341634|ref|YP_004546614.1| shikimate 5-dehydrogenase [Desulfotomaculum ruminis DSM 2154]
gi|334092988|gb|AEG61328.1| shikimate 5-dehydrogenase [Desulfotomaculum ruminis DSM 2154]
Length = 293
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+N TK+ GL PV HS P +HN F + N +YVP + D LK+ + +S
Sbjct: 6 LNGKTKICGLFGFPVEHSFSPAMHNAAFEELGLNWVYVPFCISPDRLKQAMQSITSLGLT 65
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G +V P+K+AV+ DE+HP A I AVNTI+ G+L+G+NTD + ++ D
Sbjct: 66 GINVTVPHKQAVLPLLDEIHPTAGIIGAVNTIVN--DQGRLVGHNTDGAGFVKSLTD 120
>gi|427727930|ref|YP_007074167.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7524]
gi|427363849|gb|AFY46570.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7524]
Length = 292
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN + + IY+P + ++L+ + ++ D
Sbjct: 2 ITGTTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYIYLPFPIKPENLEVAIAGLAAIDVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ E+ P+AQAI AVNT+ R + + +G NTD E I+ ++ +
Sbjct: 62 GFSVTIPHKQAIIPLLAEISPIAQAIGAVNTVTRH--NNQWVGTNTDIEGFISPLQTTYQ 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ + TA V+ G GGA RA+ G G
Sbjct: 120 Q-DWSQKTA-----------VILGNGGAARAVVAGCYQLG 147
>gi|69249504|ref|ZP_00604998.1| Quinate/Shikimate 5-dehydrogenase [Enterococcus faecium DO]
gi|257878246|ref|ZP_05657899.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,230,933]
gi|257880974|ref|ZP_05660627.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,502]
gi|257889556|ref|ZP_05669209.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,410]
gi|257892504|ref|ZP_05672157.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,408]
gi|260559796|ref|ZP_05831975.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium C68]
gi|261207823|ref|ZP_05922508.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium TC 6]
gi|289566376|ref|ZP_06446804.1| shikimate 5-dehydrogenase [Enterococcus faecium D344SRF]
gi|293560591|ref|ZP_06677079.1| shikimate 5-dehydrogenase [Enterococcus faecium E1162]
gi|293569865|ref|ZP_06680952.1| shikimate 5-dehydrogenase [Enterococcus faecium E1071]
gi|294621710|ref|ZP_06700874.1| shikimate 5-dehydrogenase [Enterococcus faecium U0317]
gi|314937722|ref|ZP_07845045.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a04]
gi|314942645|ref|ZP_07849473.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133C]
gi|314948840|ref|ZP_07852211.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0082]
gi|314950852|ref|ZP_07853922.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133A]
gi|314992913|ref|ZP_07858311.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133B]
gi|314995671|ref|ZP_07860762.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a01]
gi|383328271|ref|YP_005354155.1| shikimate 5-dehydrogenase [Enterococcus faecium Aus0004]
gi|389868552|ref|YP_006375975.1| shikimate dehydrogenase [Enterococcus faecium DO]
gi|406581268|ref|ZP_11056426.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD4E]
gi|406583572|ref|ZP_11058628.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD3E]
gi|406585881|ref|ZP_11060835.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD2E]
gi|406591382|ref|ZP_11065666.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD1E]
gi|410937496|ref|ZP_11369356.1| shikimate dehydrogenase [Enterococcus sp. GMD5E]
gi|415891282|ref|ZP_11549686.1| shikimate 5-dehydrogenase [Enterococcus faecium E4453]
gi|416142973|ref|ZP_11599688.1| shikimate 5-dehydrogenase [Enterococcus faecium E4452]
gi|424790457|ref|ZP_18217001.1| shikimate dehydrogenase [Enterococcus faecium V689]
gi|424795666|ref|ZP_18221490.1| shikimate dehydrogenase [Enterococcus faecium S447]
gi|424819259|ref|ZP_18244382.1| shikimate dehydrogenase [Enterococcus faecium R501]
gi|424857325|ref|ZP_18281485.1| shikimate dehydrogenase [Enterococcus faecium R499]
gi|424864847|ref|ZP_18288746.1| shikimate dehydrogenase [Enterococcus faecium R497]
gi|424950425|ref|ZP_18365589.1| shikimate dehydrogenase [Enterococcus faecium R496]
gi|424953710|ref|ZP_18368654.1| shikimate dehydrogenase [Enterococcus faecium R494]
gi|424956712|ref|ZP_18371476.1| shikimate dehydrogenase [Enterococcus faecium R446]
gi|424959170|ref|ZP_18373771.1| shikimate dehydrogenase [Enterococcus faecium P1986]
gi|424963383|ref|ZP_18377611.1| shikimate dehydrogenase [Enterococcus faecium P1190]
gi|424969022|ref|ZP_18382613.1| shikimate dehydrogenase [Enterococcus faecium P1140]
gi|424969603|ref|ZP_18383161.1| shikimate dehydrogenase [Enterococcus faecium P1139]
gi|424973123|ref|ZP_18386414.1| shikimate dehydrogenase [Enterococcus faecium P1137]
gi|424976239|ref|ZP_18389343.1| shikimate dehydrogenase [Enterococcus faecium P1123]
gi|424980094|ref|ZP_18392912.1| shikimate dehydrogenase [Enterococcus faecium ERV99]
gi|424984020|ref|ZP_18396574.1| shikimate dehydrogenase [Enterococcus faecium ERV69]
gi|424987351|ref|ZP_18399729.1| shikimate dehydrogenase [Enterococcus faecium ERV38]
gi|424990468|ref|ZP_18402680.1| shikimate dehydrogenase [Enterococcus faecium ERV26]
gi|424993800|ref|ZP_18405775.1| shikimate dehydrogenase [Enterococcus faecium ERV168]
gi|424997154|ref|ZP_18408921.1| shikimate dehydrogenase [Enterococcus faecium ERV165]
gi|425000132|ref|ZP_18411713.1| shikimate dehydrogenase [Enterococcus faecium ERV161]
gi|425004114|ref|ZP_18415443.1| shikimate dehydrogenase [Enterococcus faecium ERV102]
gi|425006313|ref|ZP_18417493.1| shikimate dehydrogenase [Enterococcus faecium ERV1]
gi|425009912|ref|ZP_18420895.1| shikimate dehydrogenase [Enterococcus faecium E422]
gi|425014063|ref|ZP_18424759.1| shikimate dehydrogenase [Enterococcus faecium E417]
gi|425016425|ref|ZP_18426989.1| shikimate dehydrogenase [Enterococcus faecium C621]
gi|425019992|ref|ZP_18430322.1| shikimate dehydrogenase [Enterococcus faecium C497]
gi|425024056|ref|ZP_18434145.1| shikimate dehydrogenase [Enterococcus faecium C1904]
gi|425031046|ref|ZP_18436191.1| shikimate dehydrogenase [Enterococcus faecium 515]
gi|425034089|ref|ZP_18439001.1| shikimate dehydrogenase [Enterococcus faecium 514]
gi|425038010|ref|ZP_18442643.1| shikimate dehydrogenase [Enterococcus faecium 513]
gi|425040819|ref|ZP_18445261.1| shikimate dehydrogenase [Enterococcus faecium 511]
gi|425044491|ref|ZP_18448650.1| shikimate dehydrogenase [Enterococcus faecium 510]
gi|425049209|ref|ZP_18453074.1| shikimate dehydrogenase [Enterococcus faecium 509]
gi|425051105|ref|ZP_18454787.1| shikimate dehydrogenase [Enterococcus faecium 506]
gi|425062417|ref|ZP_18465577.1| shikimate dehydrogenase [Enterococcus faecium 503]
gi|427394923|ref|ZP_18887845.1| shikimate 5-dehydrogenase [Enterococcus durans FB129-CNAB-4]
gi|430825333|ref|ZP_19443538.1| shikimate 5-dehydrogenase [Enterococcus faecium E0164]
gi|430828586|ref|ZP_19446706.1| shikimate 5-dehydrogenase [Enterococcus faecium E0269]
gi|430830533|ref|ZP_19448591.1| shikimate 5-dehydrogenase [Enterococcus faecium E0333]
gi|430844277|ref|ZP_19462175.1| shikimate 5-dehydrogenase [Enterococcus faecium E1050]
gi|430846256|ref|ZP_19464116.1| shikimate 5-dehydrogenase [Enterococcus faecium E1133]
gi|430854634|ref|ZP_19472347.1| shikimate 5-dehydrogenase [Enterococcus faecium E1392]
gi|430862200|ref|ZP_19479552.1| shikimate 5-dehydrogenase [Enterococcus faecium E1573]
gi|430870903|ref|ZP_19483490.1| shikimate 5-dehydrogenase [Enterococcus faecium E1575]
gi|430959924|ref|ZP_19487059.1| shikimate 5-dehydrogenase [Enterococcus faecium E1576]
gi|431008916|ref|ZP_19489356.1| shikimate 5-dehydrogenase [Enterococcus faecium E1578]
gi|431195518|ref|ZP_19500496.1| shikimate 5-dehydrogenase [Enterococcus faecium E1620]
gi|431228613|ref|ZP_19501754.1| shikimate 5-dehydrogenase [Enterococcus faecium E1622]
gi|431258926|ref|ZP_19505103.1| shikimate 5-dehydrogenase [Enterococcus faecium E1623]
gi|431540493|ref|ZP_19517950.1| shikimate 5-dehydrogenase [Enterococcus faecium E1731]
gi|431745997|ref|ZP_19534833.1| shikimate 5-dehydrogenase [Enterococcus faecium E2134]
gi|431748492|ref|ZP_19537250.1| shikimate 5-dehydrogenase [Enterococcus faecium E2297]
gi|431754638|ref|ZP_19543299.1| shikimate 5-dehydrogenase [Enterococcus faecium E2883]
gi|431765421|ref|ZP_19553935.1| shikimate 5-dehydrogenase [Enterococcus faecium E4215]
gi|431770633|ref|ZP_19559032.1| shikimate 5-dehydrogenase [Enterococcus faecium E1644]
gi|431773158|ref|ZP_19561490.1| shikimate 5-dehydrogenase [Enterococcus faecium E2369]
gi|431775980|ref|ZP_19564249.1| shikimate 5-dehydrogenase [Enterococcus faecium E2560]
gi|431778556|ref|ZP_19566766.1| shikimate 5-dehydrogenase [Enterococcus faecium E4389]
gi|431782083|ref|ZP_19570221.1| shikimate 5-dehydrogenase [Enterococcus faecium E6012]
gi|431785527|ref|ZP_19573552.1| shikimate 5-dehydrogenase [Enterococcus faecium E6045]
gi|447913136|ref|YP_007394548.1| Shikimate, quinate 5-dehydrogenase I beta [Enterococcus faecium
NRRL B-2354]
gi|68194130|gb|EAN08666.1| Quinate/Shikimate 5-dehydrogenase [Enterococcus faecium DO]
gi|257812474|gb|EEV41232.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,230,933]
gi|257816632|gb|EEV43960.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,502]
gi|257825916|gb|EEV52542.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,410]
gi|257828883|gb|EEV55490.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,408]
gi|260074020|gb|EEW62343.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium C68]
gi|260078206|gb|EEW65912.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium TC 6]
gi|289161814|gb|EFD09686.1| shikimate 5-dehydrogenase [Enterococcus faecium D344SRF]
gi|291587613|gb|EFF19490.1| shikimate 5-dehydrogenase [Enterococcus faecium E1071]
gi|291598719|gb|EFF29772.1| shikimate 5-dehydrogenase [Enterococcus faecium U0317]
gi|291605414|gb|EFF34860.1| shikimate 5-dehydrogenase [Enterococcus faecium E1162]
gi|313590144|gb|EFR68989.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a01]
gi|313592556|gb|EFR71401.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133B]
gi|313596985|gb|EFR75830.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133A]
gi|313598582|gb|EFR77427.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133C]
gi|313642925|gb|EFS07505.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a04]
gi|313644783|gb|EFS09363.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0082]
gi|364089488|gb|EHM32174.1| shikimate 5-dehydrogenase [Enterococcus faecium E4452]
gi|364094077|gb|EHM36288.1| shikimate 5-dehydrogenase [Enterococcus faecium E4453]
gi|378937965|gb|AFC63037.1| shikimate 5-dehydrogenase [Enterococcus faecium Aus0004]
gi|388533801|gb|AFK58993.1| shikimate dehydrogenase [Enterococcus faecium DO]
gi|402920798|gb|EJX41286.1| shikimate dehydrogenase [Enterococcus faecium V689]
gi|402924110|gb|EJX44343.1| shikimate dehydrogenase [Enterococcus faecium S447]
gi|402926323|gb|EJX46367.1| shikimate dehydrogenase [Enterococcus faecium R501]
gi|402929074|gb|EJX48868.1| shikimate dehydrogenase [Enterococcus faecium R499]
gi|402933157|gb|EJX52612.1| shikimate dehydrogenase [Enterococcus faecium R496]
gi|402938462|gb|EJX57471.1| shikimate dehydrogenase [Enterococcus faecium R494]
gi|402939866|gb|EJX58747.1| shikimate dehydrogenase [Enterococcus faecium R497]
gi|402945304|gb|EJX63662.1| shikimate dehydrogenase [Enterococcus faecium R446]
gi|402949532|gb|EJX67586.1| shikimate dehydrogenase [Enterococcus faecium P1190]
gi|402949997|gb|EJX68022.1| shikimate dehydrogenase [Enterococcus faecium P1140]
gi|402951232|gb|EJX69181.1| shikimate dehydrogenase [Enterococcus faecium P1986]
gi|402959301|gb|EJX76568.1| shikimate dehydrogenase [Enterococcus faecium P1137]
gi|402963746|gb|EJX80595.1| shikimate dehydrogenase [Enterococcus faecium P1139]
gi|402967447|gb|EJX83999.1| shikimate dehydrogenase [Enterococcus faecium ERV99]
gi|402969940|gb|EJX86316.1| shikimate dehydrogenase [Enterococcus faecium ERV69]
gi|402970247|gb|EJX86605.1| shikimate dehydrogenase [Enterococcus faecium P1123]
gi|402974689|gb|EJX90713.1| shikimate dehydrogenase [Enterococcus faecium ERV38]
gi|402979659|gb|EJX95321.1| shikimate dehydrogenase [Enterococcus faecium ERV26]
gi|402981658|gb|EJX97173.1| shikimate dehydrogenase [Enterococcus faecium ERV168]
gi|402986775|gb|EJY01884.1| shikimate dehydrogenase [Enterococcus faecium ERV165]
gi|402989906|gb|EJY04808.1| shikimate dehydrogenase [Enterococcus faecium ERV161]
gi|402990517|gb|EJY05387.1| shikimate dehydrogenase [Enterococcus faecium ERV102]
gi|402997497|gb|EJY11816.1| shikimate dehydrogenase [Enterococcus faecium ERV1]
gi|402999714|gb|EJY13891.1| shikimate dehydrogenase [Enterococcus faecium E417]
gi|403001557|gb|EJY15603.1| shikimate dehydrogenase [Enterococcus faecium E422]
gi|403007094|gb|EJY20689.1| shikimate dehydrogenase [Enterococcus faecium C621]
gi|403008172|gb|EJY21700.1| shikimate dehydrogenase [Enterococcus faecium C1904]
gi|403010421|gb|EJY23803.1| shikimate dehydrogenase [Enterococcus faecium C497]
gi|403016457|gb|EJY29275.1| shikimate dehydrogenase [Enterococcus faecium 515]
gi|403020368|gb|EJY32910.1| shikimate dehydrogenase [Enterococcus faecium 513]
gi|403021388|gb|EJY33853.1| shikimate dehydrogenase [Enterococcus faecium 514]
gi|403027677|gb|EJY39552.1| shikimate dehydrogenase [Enterococcus faecium 511]
gi|403028708|gb|EJY40517.1| shikimate dehydrogenase [Enterococcus faecium 509]
gi|403029808|gb|EJY41540.1| shikimate dehydrogenase [Enterococcus faecium 510]
gi|403038452|gb|EJY49667.1| shikimate dehydrogenase [Enterococcus faecium 503]
gi|403038554|gb|EJY49765.1| shikimate dehydrogenase [Enterococcus faecium 506]
gi|404452798|gb|EJZ99949.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD4E]
gi|404456367|gb|EKA03090.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD3E]
gi|404461989|gb|EKA07837.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD2E]
gi|404467858|gb|EKA12918.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD1E]
gi|410734109|gb|EKQ76030.1| shikimate dehydrogenase [Enterococcus sp. GMD5E]
gi|425724059|gb|EKU86943.1| shikimate 5-dehydrogenase [Enterococcus durans FB129-CNAB-4]
gi|430446226|gb|ELA55911.1| shikimate 5-dehydrogenase [Enterococcus faecium E0164]
gi|430483135|gb|ELA60234.1| shikimate 5-dehydrogenase [Enterococcus faecium E0333]
gi|430483419|gb|ELA60497.1| shikimate 5-dehydrogenase [Enterococcus faecium E0269]
gi|430496867|gb|ELA72926.1| shikimate 5-dehydrogenase [Enterococcus faecium E1050]
gi|430539050|gb|ELA79312.1| shikimate 5-dehydrogenase [Enterococcus faecium E1133]
gi|430548293|gb|ELA88198.1| shikimate 5-dehydrogenase [Enterococcus faecium E1392]
gi|430549491|gb|ELA89323.1| shikimate 5-dehydrogenase [Enterococcus faecium E1573]
gi|430556408|gb|ELA95916.1| shikimate 5-dehydrogenase [Enterococcus faecium E1576]
gi|430558702|gb|ELA98113.1| shikimate 5-dehydrogenase [Enterococcus faecium E1575]
gi|430560831|gb|ELB00123.1| shikimate 5-dehydrogenase [Enterococcus faecium E1578]
gi|430571896|gb|ELB10770.1| shikimate 5-dehydrogenase [Enterococcus faecium E1620]
gi|430574915|gb|ELB13678.1| shikimate 5-dehydrogenase [Enterococcus faecium E1622]
gi|430577021|gb|ELB15626.1| shikimate 5-dehydrogenase [Enterococcus faecium E1623]
gi|430593687|gb|ELB31669.1| shikimate 5-dehydrogenase [Enterococcus faecium E1731]
gi|430609424|gb|ELB46618.1| shikimate 5-dehydrogenase [Enterococcus faecium E2134]
gi|430613695|gb|ELB50698.1| shikimate 5-dehydrogenase [Enterococcus faecium E2297]
gi|430619232|gb|ELB56060.1| shikimate 5-dehydrogenase [Enterococcus faecium E2883]
gi|430628508|gb|ELB64943.1| shikimate 5-dehydrogenase [Enterococcus faecium E4215]
gi|430634900|gb|ELB71006.1| shikimate 5-dehydrogenase [Enterococcus faecium E1644]
gi|430637123|gb|ELB73161.1| shikimate 5-dehydrogenase [Enterococcus faecium E2369]
gi|430642095|gb|ELB77878.1| shikimate 5-dehydrogenase [Enterococcus faecium E2560]
gi|430643629|gb|ELB79348.1| shikimate 5-dehydrogenase [Enterococcus faecium E4389]
gi|430647496|gb|ELB82942.1| shikimate 5-dehydrogenase [Enterococcus faecium E6045]
gi|430648098|gb|ELB83521.1| shikimate 5-dehydrogenase [Enterococcus faecium E6012]
gi|445188845|gb|AGE30487.1| Shikimate, quinate 5-dehydrogenase I beta [Enterococcus faecium
NRRL B-2354]
Length = 284
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIV 151
>gi|293553506|ref|ZP_06674134.1| shikimate 5-dehydrogenase [Enterococcus faecium E1039]
gi|430833289|ref|ZP_19451302.1| shikimate 5-dehydrogenase [Enterococcus faecium E0679]
gi|430835984|ref|ZP_19453969.1| shikimate 5-dehydrogenase [Enterococcus faecium E0680]
gi|431295209|ref|ZP_19507097.1| shikimate 5-dehydrogenase [Enterococcus faecium E1626]
gi|431767006|ref|ZP_19555466.1| shikimate 5-dehydrogenase [Enterococcus faecium E1321]
gi|291602383|gb|EFF32607.1| shikimate 5-dehydrogenase [Enterococcus faecium E1039]
gi|430486744|gb|ELA63580.1| shikimate 5-dehydrogenase [Enterococcus faecium E0679]
gi|430488824|gb|ELA65472.1| shikimate 5-dehydrogenase [Enterococcus faecium E0680]
gi|430581299|gb|ELB19744.1| shikimate 5-dehydrogenase [Enterococcus faecium E1626]
gi|430631879|gb|ELB68179.1| shikimate 5-dehydrogenase [Enterococcus faecium E1321]
Length = 284
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIV 151
>gi|430852566|ref|ZP_19470297.1| shikimate 5-dehydrogenase [Enterococcus faecium E1258]
gi|430541400|gb|ELA81545.1| shikimate 5-dehydrogenase [Enterococcus faecium E1258]
Length = 284
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIV 151
>gi|425058431|ref|ZP_18461812.1| shikimate dehydrogenase [Enterococcus faecium 504]
gi|403038372|gb|EJY49588.1| shikimate dehydrogenase [Enterococcus faecium 504]
Length = 284
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIV 151
>gi|403384196|ref|ZP_10926253.1| shikimate dehydrogenase [Kurthia sp. JC30]
Length = 277
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 15/155 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K + +I P+ HS P++HN +G Y+P+ + ++L + F+ +GF+V
Sbjct: 3 KWYAVIGDPIEHSMSPLMHNTWMNAEERDGTYIPLHITKENLVEGFNGMKLLGCSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KEA++ D++ PLAQ + AVNT++R+ DG GYNTD + ++EDA+
Sbjct: 63 IPHKEAIIPLLDDIDPLAQKMGAVNTVVRQ-LDGTYKGYNTDGLGFVKSLEDAV------ 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
G+ + ++ GAGGA R + F G
Sbjct: 116 ------GTHHKDKRVLVIGAGGASRGICFALAQEG 144
>gi|294618196|ref|ZP_06697782.1| shikimate 5-dehydrogenase [Enterococcus faecium E1679]
gi|431499460|ref|ZP_19515039.1| shikimate 5-dehydrogenase [Enterococcus faecium E1634]
gi|431618722|ref|ZP_19522767.1| shikimate 5-dehydrogenase [Enterococcus faecium E1904]
gi|291595544|gb|EFF26851.1| shikimate 5-dehydrogenase [Enterococcus faecium E1679]
gi|430588096|gb|ELB26301.1| shikimate 5-dehydrogenase [Enterococcus faecium E1634]
gi|430603872|gb|ELB41383.1| shikimate 5-dehydrogenase [Enterococcus faecium E1904]
Length = 284
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIV 151
>gi|145577907|gb|ABP82672.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
entomocidus]
Length = 238
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDARYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L G+GGA RA+ F G +
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVK 131
>gi|257884631|ref|ZP_05664284.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,501]
gi|257820469|gb|EEV47617.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,501]
Length = 284
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIV 151
>gi|145577921|gb|ABP82679.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 16/147 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKAAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV 395
+ +L GAGGA RA+ F G + +
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEI 133
>gi|145577941|gb|ABP82689.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
azorensis]
gi|145577953|gb|ABP82695.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
zhaodongensis]
Length = 238
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L G+GGA RA+ F G +
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVK 131
>gi|145577917|gb|ABP82677.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
thompsoni]
Length = 238
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L G+GGA RA+ F G +
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVK 131
>gi|145577951|gb|ABP82694.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
tolworthi]
Length = 238
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L G+GGA RA+ F G +
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVK 131
>gi|150399456|ref|YP_001323223.1| 3-dehydroquinate dehydratase, type I [Methanococcus vannielii SB]
gi|166219208|sp|A6UQ39.1|AROD_METVS RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|150012159|gb|ABR54611.1| 3-dehydroquinate dehydratase, type I [Methanococcus vannielii SB]
Length = 218
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ +VE+ L + +A G D+VE RLD ++N D+E +P +I
Sbjct: 1 MICIPIIDNTVEKALISAKEALKYG-DIVEFRLDLLDNLTKF-DIEKF---AKIPSIITI 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH-QSGTRFIVSC 130
R W GG ++ +KR+E L A GA ++D ELK N+ Y + S T+ IVS
Sbjct: 56 RANWEGGAWKESNNKRIEFLKHAIKHGAKFIDVELKEEKNLELVTYRNEIGSKTKIIVSY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TP +L +V + G DI K N ++ +I ++++ IIA +GE
Sbjct: 116 HDFEKTPEINELIDVVEKELKIG-DIAKFATFSNSKKDVLKILEVMNKYPGDIIAIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKG 213
G ++++L +F L + S+KG
Sbjct: 175 SGKLTRILGLRFGSILTFASMKG 197
>gi|145577909|gb|ABP82673.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar higo]
Length = 238
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L G+GGA RA+ F G +
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVK 131
>gi|344229548|gb|EGV61433.1| Pentafunctional AroM protein [Candida tenuis ATCC 10573]
Length = 1558
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 169/385 (43%), Gaps = 29/385 (7%)
Query: 20 QSVEQVLSNMYQAKAEGADVVEIRLD---CINNFQPGKDLEIILTKKPLPVLIVYRPKWA 76
QS ++ L ++ + G V+I +D +N + + + T LP++ + +
Sbjct: 1056 QSTKE-LKKDFEEISVGVSAVKINIDYLKAVNKATVCEQICYLRTLTSLPIIFSVKTESQ 1114
Query: 77 GGLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + +E+L+ + LG +Y D ++ + +L K S++ T+ I S + +
Sbjct: 1115 GGKLNDADLDLVESLYDVGFKLGVEYADIQMDLPGELLHK-IVSNKRFTKLIASYRSESD 1173
Query: 136 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQL-LSHCQVPIIAYSVGERGLV 194
S E + + A AD++KLV + + Q SH +P+IAY+ E G +
Sbjct: 1174 WISAEWVNKY-NLAVALNADVVKLVGVAKQFQDNFTLEQFRASHSSIPLIAYNEREAGKL 1232
Query: 195 SQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV-FGLISKPVGHSKG 253
+++ + F V L + L +P Y + T + F ++ +PV HS+
Sbjct: 1233 TKITNTIFTP--VSHDLLNSNELTVP-----ESNYAYSLVGGYTSLKFWIVGEPVSHSRS 1285
Query: 254 PILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY--SSPDFAGFSVGFPYKEAVMKFCDEVH 311
P LHN + + + D K FST + DF G +V P K +MK+ E+
Sbjct: 1286 PPLHNSAYEKLKLPYTFDRFESSDAAKVFSTLIENVDDFGGLAVTMPLKIDMMKYVSELS 1345
Query: 312 PLAQAIAAVNTIIRRPSD-GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 370
A+ I A+NT+I S GK G NTD I+++ G N T P+ G
Sbjct: 1346 VSAKVIGAINTVIPLASHPGKYFGDNTDW----VGIKNSFVRDGVPNIT---NMPVNG-- 1396
Query: 371 FVLAGAGGAGRALAFGAKSRGARVV 395
++ G GG RA F G + +
Sbjct: 1397 -LVIGGGGTSRAALFALHDMGCKKI 1420
>gi|50311867|ref|XP_455965.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74604981|sp|Q6CJC4.1|ARO1_KLULA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|49645101|emb|CAG98673.1| KLLA0F19712p [Kluyveromyces lactis]
Length = 1578
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 166/377 (44%), Gaps = 40/377 (10%)
Query: 36 GADVVEIRLDCINNFQPG---KDLEII-LTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D +++F K + ++ K LP++ R GG ++ D++ LE+L
Sbjct: 1090 GCEAVELRVDHLSSFSSDFVTKQISLLRAATKSLPIVFTVRTVSQGGKFQDDDYDLLESL 1149
Query: 92 -HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQ 150
+A +Y+D EL + +NIL + +S T+ I S + +D + Q
Sbjct: 1150 LKVALKNAVEYIDLELTLPNNIL-YNVLNKKSNTKIIGSHHDFAAKFPWDDAEWENRYNQ 1208
Query: 151 ATG--ADIIKLV---FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
A DI+K V S +D + + +H P+IA ++ E G +S++L N
Sbjct: 1209 ALSLDVDIVKFVGTAVSFDDNLALEKFRS--THTLKPLIAINMTETGKLSRVL----NNI 1262
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPILHNPTFRH 263
L + K P P +L + ++ H K F +I P+GHS+ PILHN +
Sbjct: 1263 LTPVTSKLLPSAAAPGQLTLAEINQLYHQIGGLPAKKFFVIGSPIGHSRSPILHNTGYEL 1322
Query: 264 VNYNGIYVPMFVDDL---KKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAV 320
+ + +D+ KK T D G +V P K ++ E+ A+ I AV
Sbjct: 1323 LGLPHHFDKFETEDIEVVKKELLTRE--DLGGLAVTIPLKLDIIDSMFELSEAAKTIGAV 1380
Query: 321 NTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP--LAGRMFVLAGAGG 378
NT+I + K G NTD G KN S G P ++G ++ GAGG
Sbjct: 1381 NTVIPLGKN-KFRGDNTDW-------------LGIKNSLVSNGVPSSVSGSAGLIIGAGG 1426
Query: 379 AGRALAFGAKSRGARVV 395
RA + K G +
Sbjct: 1427 TSRAAIYALKQIGCDTI 1443
>gi|332157961|ref|YP_004423240.1| shikimate 5-dehydrogenase [Pyrococcus sp. NA2]
gi|331033424|gb|AEC51236.1| shikimate 5-dehydrogenase [Pyrococcus sp. NA2]
Length = 273
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
INA TKV+GLI KPV HS PI+HN F N N +Y+ V+ L+ +
Sbjct: 3 INAKTKVYGLIGKPVRHSLSPIMHNALFEKYNINAVYLAFEVELGRLRDAIMGAKALGIM 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K V KF DE+ A+ I +VNTI DG+L+GYNTD + A+E +
Sbjct: 63 GLNVTMPHKVEVTKFLDELSDEAREIGSVNTIAN--EDGRLVGYNTDGIGARKALERVTE 120
Query: 352 ERGYK 356
G K
Sbjct: 121 VEGSK 125
>gi|145577899|gb|ABP82668.1| shikimate 5-dehydrogenase [Bacillus cereus]
Length = 238
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L G+GGA RA+ F G +
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVK 131
>gi|145577911|gb|ABP82674.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar kenyae]
Length = 238
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L G+GGA RA+ F G +
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVK 131
>gi|145577959|gb|ABP82698.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 16/147 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
EV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV 395
+ +L GAGGA RA+ F G + +
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEI 133
>gi|2492977|sp|Q12659.1|ARO1_PNECA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|475972|gb|AAA17839.1| pentafunctional enzyme [Pneumocystis carinii]
Length = 1581
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 174/379 (45%), Gaps = 42/379 (11%)
Query: 36 GADVVEIRLDCINNFQPGKDLE-------------IILTKKPLPVLIVYRPKWAGGLYEG 82
G D +EIR+D FQ ++++ ++ K LP++ R GG +
Sbjct: 1084 GCDAIEIRIDL---FQKPEEIDKYPSLEYIAEKIFLLRQKTSLPLIYTLRTTNHGGSFLS 1140
Query: 83 DEHKRLEA--LHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP-SE 139
E K + LH A+ G +++D EL +AS + K ++ T+ I S + + E P S
Sbjct: 1141 SEKKLAKEYILHGAK-WGFEFLDIELDIASELF-KTINNSWPYTKIIASYH-NIEKPISC 1197
Query: 140 EDLGYLVSRMQATG-ADIIKLVFSVNDITEIARIFQLLS---HCQVPIIAYSVGERGLVS 195
+D ++ +A IIKLV + + I + + + S + +VP I + G +G +S
Sbjct: 1198 DDFEWIQKYKEAQHYGHIIKLVGTSSSIEDNFFLEEFKSKFINKKVPSIIINTGIKGQLS 1257
Query: 196 QLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPI 255
++++ F + + SL G +++ + + + + K F L KP+ HS+ P
Sbjct: 1258 RIMNT-FMTPVTHPSLPSKIAPGQLSIKEINTALHIMGLLPEKKYF-LFGKPIKHSQSPN 1315
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN F + Y D + + +F G SV P K + DE+ A
Sbjct: 1316 IHNLGFEILGLPYKYQLFETDSISELKEILHLEEFGGASVTIPLKTNISILLDEISDHAA 1375
Query: 316 AIAAVNTIIRRPSDGKLI--GYNTDCEASITAIEDAIK-ERGYKNGTASFGSPLAGRMFV 372
I +VNTI R ++G+ I G NTD + I AI++ K E+ ++N + F+
Sbjct: 1376 LIGSVNTITRTYNNGQYILKGENTDWQGIIKAIKNFNKFEKSFENFSG----------FI 1425
Query: 373 LAGAGGAGRALAFGAKSRG 391
+ GAGGA RA + S G
Sbjct: 1426 I-GAGGASRAAIYALLSLG 1443
>gi|334127717|ref|ZP_08501620.1| shikimate dehydrogenase [Centipeda periodontii DSM 2778]
gi|333388853|gb|EGK60023.1| shikimate dehydrogenase [Centipeda periodontii DSM 2778]
Length = 288
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 16/171 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSP 288
++ I TK+ G++ P+GHS PI+ N R + +Y +P+ D L
Sbjct: 1 MQMITGKTKLLGVLGAPIGHSLSPIIQNEALRAAGLDYVYAALPVRADALTSAVHGLRDA 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
AGF+V P+K ++ D++ A+ I AVNT++ +G+L+G+NTD
Sbjct: 61 GIAGFNVTIPFKTEIIPLMDDLSEDARRIHAVNTVVVE-ENGRLVGHNTDVT-------- 111
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI 399
G+ G A G LAG+ VL GAGGA RA+ +G G +V+ +
Sbjct: 112 -----GFLAGFAERGIALAGKKAVLIGAGGAARAVLWGLLRSGVSLVVIGV 157
>gi|302671210|ref|YP_003831170.1| shikimate 5-dehydrogenase/shikimate kinase [Butyrivibrio
proteoclasticus B316]
gi|302395683|gb|ADL34588.1| shikimate 5-dehydrogenase/shikimate kinase [Butyrivibrio
proteoclasticus B316]
Length = 510
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAG 292
+ +T V GLI PV H+ P++HN N +YVP V D+ + G
Sbjct: 6 DGNTNVCGLIGNPVRHTLSPLIHNSLAEITGINMVYVPFEVAEGDVSDAVKGALALGVRG 65
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
+V PYK V+ +++ PLA+AI AVNT++R P +G GYNTD +++D
Sbjct: 66 LNVTIPYKSDVIPCLEDIDPLAKAIGAVNTLVRTP-NGGFKGYNTDMTGLYHSMQDE--- 121
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G L GR V+ GAGG R AF S+GA+ V
Sbjct: 122 ----------GVELEGRTVVILGAGGVARPAAFLCASKGAKKV 154
>gi|145577905|gb|ABP82671.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 16/147 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV 395
+ +L GAGGA RA+ F G + +
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEI 133
>gi|76789098|ref|YP_328184.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydia trachomatis A/HAR-13]
gi|237802795|ref|YP_002887989.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis B/Jali20/OT]
gi|237804717|ref|YP_002888871.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|376282376|ref|YP_005156202.1| shikimate 5-dehydrogenase [Chlamydia trachomatis A2497]
gi|76167628|gb|AAX50636.1| shikimate 5-dehydrogenase [Chlamydia trachomatis A/HAR-13]
gi|231273017|emb|CAX09929.1| shikimate 5-dehydrogenase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274029|emb|CAX10822.1| shikimate 5-dehydrogenase [Chlamydia trachomatis B/Jali20/OT]
gi|371908406|emb|CAX09035.1| shikimate 5-dehydrogenase [Chlamydia trachomatis A2497]
gi|438690297|emb|CCP49554.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis A/7249]
gi|438691381|emb|CCP48655.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis A/5291]
gi|438692754|emb|CCP47756.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis A/363]
Length = 478
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 169/397 (42%), Gaps = 49/397 (12%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T I P ++ +Q+L ++ + V + + C+ +L+ ++ P+ +L
Sbjct: 4 TTISGPSFLEAKKQILRSLKECHCFEMRVDLLSVSCL-------ELKKLMELAPISILAW 56
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+P+ + D ++++L +L +Y+D E + + H + I S
Sbjct: 57 KKPESCS---QADWIDKMQSL---AELNPNYLDLEKDFPEEDMIRIRQLHPQ-IKIIRSL 109
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP--IIAYSV 188
+ T D+ L + M+++ AD K S + T++ I C +P +
Sbjct: 110 H----TSEHTDIIQLYAHMRSSAADYYKFAVSSSSTTDLLDICH--QKCSLPENTTVVCL 163
Query: 189 GERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTY--KVEHINADTKVFGLI-- 244
G G S++LSP Y G+ + P SL+ Y ++A + + LI
Sbjct: 164 GGMGRPSRILSPILQNPFTYARSTGSSPVA-PGQFSLKHHYFYNFASLSAQSPICALIGD 222
Query: 245 -SKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
S+ +GH + HNP F + Y+ P+ +L KFFST + F G SV P K
Sbjct: 223 TSRSIGH----LTHNPFFSQLGVACPYIKLPLTPQELPKFFSTIRTQPFLGVSVTSPLKT 278
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
AV+ F D+ P +A + NT++ R G++ G++TD E G +
Sbjct: 279 AVLPFLDKQAPSVKASGSCNTLVIR--QGEIEGHDTDGE-------------GLFSVLMQ 323
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL + + GAGGA +++A ++IF+
Sbjct: 324 HQIPLNNQRVAIIGAGGAAQSIATRLSRANCELLIFN 360
>gi|322707656|gb|EFY99234.1| pentafunctional AROM polypeptide [Metarhizium anisopliae ARSEF 23]
Length = 1570
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 170/401 (42%), Gaps = 35/401 (8%)
Query: 3 VVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQ---PGKDLEII 59
V NI K L + + L + A G+D +EIR+D ++++ + L ++
Sbjct: 1042 VKNIAKKDESFFVSLTVPKLNENLHAISSASV-GSDAIEIRVDLLDDWSLEAVTEQLSLL 1100
Query: 60 LTKKPLPVLIVYRPKWAGGLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYS 118
LP++ R GG + + R + LA LG +Y+D E+ + IL ++ +
Sbjct: 1101 RFVSKLPIIFTVRTVSQGGRFPDAANDHRHDLYRLALRLGVEYLDAEVTSSDEIL-QELT 1159
Query: 119 SHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATG-ADIIKLV---FSVNDITEIARI-F 173
+ T + S + + S ++ ++ +A ++IKLV S+ D ++A
Sbjct: 1160 ETRRNTLIVSSHHDPAGSLSWKNASWIPFYNRALQYGNVIKLVGNAKSIEDNFDLANFKS 1219
Query: 174 QLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYK 230
++++ + PIIA ++G G +S++L NG L S P P + +RQ
Sbjct: 1220 RMMADHKTPIIAINMGAAGQLSRIL----NGFLTPVSHPDLPFKAAPGQLSAAEIRQGRA 1275
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
+ + F L P+ S+ P LHN F Y + S F
Sbjct: 1276 LLG-QIKKREFYLFGSPISQSRSPALHNTLFGITGLPHEYHLHETSSAENLDEVLHSESF 1334
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSD-----GKLIGYNTDCEASITA 345
G SV P K V+ DE+ P AQAI AVNTII D +L+G NTD + +
Sbjct: 1335 GGASVTIPLKRDVIALVDELTPAAQAIGAVNTIIPLNDDIPSNKRRLLGDNTDWKGMVYT 1394
Query: 346 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
+ +A G N P+ + G+GG RA +
Sbjct: 1395 LSEA----GVIN-------PIKNESAAVIGSGGTTRAAIYA 1424
>gi|385270057|ref|YP_005813217.1| shikimate 5-dehydrogenase [Chlamydia trachomatis A2497]
gi|347975197|gb|AEP35218.1| Shikimate 5-dehydrogenase [Chlamydia trachomatis A2497]
Length = 500
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 169/397 (42%), Gaps = 49/397 (12%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T I P ++ +Q+L ++ + V + + C+ +L+ ++ P+ +L
Sbjct: 26 TTISGPSFLEAKKQILRSLKECHCFEMRVDLLSVSCL-------ELKKLMELAPISILAW 78
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+P+ + D ++++L +L +Y+D E + + H + I S
Sbjct: 79 KKPE---SCSQADWIDKMQSL---AELNPNYLDLEKDFPEEDMIRIRQLHPQ-IKIIRSL 131
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP--IIAYSV 188
+ T D+ L + M+++ AD K S + T++ I C +P +
Sbjct: 132 H----TSEHTDIIQLYAHMRSSAADYYKFAVSSSSTTDLLDICH--QKCSLPENTTVVCL 185
Query: 189 GERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTY--KVEHINADTKVFGLI-- 244
G G S++LSP Y G+ + P SL+ Y ++A + + LI
Sbjct: 186 GGMGRPSRILSPILQNPFTYARSTGSSPVA-PGQFSLKHHYFYNFASLSAQSPICALIGD 244
Query: 245 -SKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
S+ +GH + HNP F + Y+ P+ +L KFFST + F G SV P K
Sbjct: 245 TSRSIGH----LTHNPFFSQLGVACPYIKLPLTPQELPKFFSTIRTQPFLGVSVTSPLKT 300
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
AV+ F D+ P +A + NT++ R G++ G++TD E + +
Sbjct: 301 AVLPFLDKQAPSVKASGSCNTLVIR--QGEIEGHDTDGEGLFSVL-------------MQ 345
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL + + GAGGA +++A ++IF+
Sbjct: 346 HQIPLNNQRVAIIGAGGAAQSIATRLSRANCELLIFN 382
>gi|145577937|gb|ABP82687.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar bolivia]
gi|145577943|gb|ABP82690.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 16/147 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV 395
+ +L GAGGA RA+ F G + +
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEI 133
>gi|145577935|gb|ABP82686.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar vazensis]
Length = 238
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 16/147 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV 395
+ +L GAGGA RA+ F G + +
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEI 133
>gi|373859117|ref|ZP_09601849.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
gi|372451208|gb|EHP24687.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
Length = 279
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 17/157 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FG+I P+ HS PI+ N F++ + + Y P V ++L S +GF++
Sbjct: 3 KLFGVIGDPIAHSMSPIMQNDLFQNYSMDAHYFPFHVKKEELVDAIKGLKSLGVSGFNIT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A++ D++ PLA AI AVNT++ DGKL G+NTD GY
Sbjct: 63 VPHKVAIIPLLDQIDPLASAIGAVNTVVN--IDGKLTGFNTDG-------------NGYV 107
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
G + L + ++ GAGGA RAL F G +
Sbjct: 108 RGLTEQITNLQDKSVLMIGAGGAARALYFSLAKAGVK 144
>gi|145577931|gb|ABP82684.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
roskildiensis]
Length = 238
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDARYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L GAGGA RA+ F G R
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVR 131
>gi|14520666|ref|NP_126141.1| shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
gi|24211539|sp|Q9V1H7.1|AROE_PYRAB RecName: Full=Shikimate dehydrogenase
gi|5457882|emb|CAB49372.1| aroE shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
gi|380741199|tpe|CCE69833.1| TPA: shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
Length = 264
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KV+GLI KPV HS P++HN FR + +YV V++L K + +G +V P
Sbjct: 2 KVYGLIGKPVSHSLSPVMHNALFRKYGIDAVYVTFEVEELGKAIDGVRALGISGLNVTMP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
YKE V KF DE+ A+ I +VNTII +G LIGY TD + A+E
Sbjct: 62 YKEVVTKFLDELSEDAREINSVNTIIN--LEGSLIGYTTDGVGARKALE 108
>gi|319651634|ref|ZP_08005761.1| shikimate 5-dehydrogenase [Bacillus sp. 2_A_57_CT2]
gi|317396701|gb|EFV77412.1| shikimate 5-dehydrogenase [Bacillus sp. 2_A_57_CT2]
Length = 279
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FG+I P+ HS P +HN F + + Y + ++L + + AGF+V
Sbjct: 3 KLFGVIGDPISHSMSPAMHNDLFAAYSLDAHYQAFHISRENLTDAIIGFRAMGIAGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KEA++ DE+ PLA+AI AVNT++ + GKLIGYNTD GY
Sbjct: 63 VPHKEAIIPLLDELDPLAEAIGAVNTVVNQ--TGKLIGYNTDGS-------------GYV 107
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + + + ++ GAGGA RA+ F G ++
Sbjct: 108 KGLLNQKQSIKDKKVLIVGAGGAARAIYFTIAKEGPELL 146
>gi|336234612|ref|YP_004587228.1| shikimate dehydrogenase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361467|gb|AEH47147.1| Shikimate dehydrogenase [Geobacillus thermoglucosidasius C56-YS93]
Length = 277
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++ L PV HS P++HN F+H+N Y V+ LK + + +G +V
Sbjct: 3 KLYALFGCPVHHSLSPLMHNDAFQHMNIAARYHAFHVEPKHLKDAINGVRALGISGLNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AV+ D++ P+A+ I AVNTI+ +G+LIGYNTD + A+E+ +
Sbjct: 63 IPHKTAVIPLLDDIDPVARRIGAVNTIVN--ENGRLIGYNTDGPGYVQALEEEVH----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ G+ ++ GAGGA R + F +GA+ +
Sbjct: 116 -------IDIKGKRILVIGAGGAARGIYFSLVDKGAKQI 147
>gi|145577923|gb|ABP82680.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 16/147 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV 395
+ +L GAGGA RA+ F G + +
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEI 133
>gi|403414545|emb|CCM01245.1| predicted protein [Fibroporia radiculosa]
Length = 1621
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 157/388 (40%), Gaps = 45/388 (11%)
Query: 36 GADVVEIRLDCINNFQ----PGK----------DLEIILTKKPLPVLIVYRPKWAGGLYE 81
G D +E+R+D + + + PG + + K LP++ R GG +
Sbjct: 1111 GVDAIELRVDMLRSQKDFERPGSWIPSVAYVTDQIAALRQKTSLPIVFTTRTISQGGQFP 1170
Query: 82 GD-EHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEE 140
E + E H A +G +Y+D E+ + + Q + G I++ D
Sbjct: 1171 PHAEAEAFELFHAAARMGVEYIDVEISWSEKRI--QELVARKGHSVIIASWHDWSGNMLW 1228
Query: 141 DLGYLVSRMQATG--ADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVGERGL 193
D + ++ Q DI+K+V N + + + Q P+I ++G G
Sbjct: 1229 DGKEVEAKYQIASKFGDIVKIVGKANGFEDNLALHRFAKRMQSSTNGKPLIGINMGVEGQ 1288
Query: 194 VSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHS 251
+S++L+P + S P P S + H+ + + F + P+ HS
Sbjct: 1289 LSRILNPTLSPV----SHPLLPSKAAPGQLSFAEIQTALHLIGQSPAQRFYIFGNPIAHS 1344
Query: 252 KGPILHNPTFRHVNYNGIYVPMFVDDL-KKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310
P LHN F+ + Y + ++ + SPDF G SV P+K V+ D +
Sbjct: 1345 MSPTLHNTAFQILGLPHKYELFETQSVGEEIKAALVSPDFGGASVTIPFKLDVIPLLDSL 1404
Query: 311 HPLAQAIAAVNTII-RRPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
P A+AI AVNTI+ R+ S+G L G NTD + I A+ A
Sbjct: 1405 SPEAEAIGAVNTIVPRKKSNGSPLLYGDNTDWIGILECIRSALPNTAQTPDAA------- 1457
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGARVV 395
++ GAGG RA + + G + +
Sbjct: 1458 ----LIIGAGGTSRAAIYALRQLGVKAI 1481
>gi|154485097|ref|ZP_02027545.1| hypothetical protein EUBVEN_02820 [Eubacterium ventriosum ATCC
27560]
gi|149734050|gb|EDM50169.1| shikimate dehydrogenase [Eubacterium ventriosum ATCC 27560]
Length = 289
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
+ I T++ GL+ PV HSK P++HN +R + + +Y+ V ++L+ F
Sbjct: 4 ISEITGQTRLTGLLGSPVSHSKSPLMHNEAYRLLGLDYVYLCFDVPENNLQVAFEGLKKL 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ AGF+ P K + K DE+ P A+ I AVNT++ +GK +G+NTD I +++D
Sbjct: 64 NVAGFNCTMPDKTLMSKLVDELSPAAKIIGAVNTVVN--DNGKFVGHNTDGTGYIRSLQD 121
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + G+ L G+GGA ++ A GAR +
Sbjct: 122 C-------------GHNIVGKKMTLLGSGGAASSICVQAALDGAREI 155
>gi|326433195|gb|EGD78765.1| hypothetical protein PTSG_11780 [Salpingoeca sp. ATCC 50818]
Length = 1521
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 156/361 (43%), Gaps = 26/361 (7%)
Query: 38 DVVEIRLDCINN-----FQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
D+VE+R+D ++ F G+ + ++ P+L R GG DE L
Sbjct: 1027 DMVELRVDLLDQPTDAAFIAGQ-IALLRASTAKPILFTVRSAKQGGKLALDEDGYFNLLS 1085
Query: 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQAT 152
L LG D +D E S+ + + + GT ++S + +++ LV
Sbjct: 1086 LGARLGCDALDVETCWDSSHI-ESVCAPLRGTTIVMSQHFGRPCTHVDEVLTLVQGSNLP 1144
Query: 153 GADIIKLVFSVNDITEIARIFQLLSHCQV------PIIAYSVGERGLVSQLLSPKFNGAL 206
D+IK+VF+ ++++ + Q P+I +GE+G +S++ + +
Sbjct: 1145 FVDVIKIVFTATEVSDCFLLQQARERVHAEKVVTKPMILLLMGEQGRLSRVTNTMLT-PV 1203
Query: 207 VYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNY 266
+ ++ GT G T E + + + + F ++ PV S P++H FR
Sbjct: 1204 THANMPGTAAPGQLTWEQVLRLRRTLGLLRPRSFF-IVGSPVALSPSPLMHRTGFRLAGL 1262
Query: 267 NGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRR 326
Y + + S ++S F G SV P+K++V+ + A+ I AVNT++R
Sbjct: 1263 PWTYERLDTTSMVDVRSVFASEGFMGASVTMPFKQSVLPLLAWMDEHARRIGAVNTVVRG 1322
Query: 327 PS-DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
+ + +L+G+NTD + ++ A+ + G + VL GAGG RA +
Sbjct: 1323 GAGNTQLLGFNTDWVGIVKPLQSAMPAETRER---------TGNVLVL-GAGGTARAACY 1372
Query: 386 G 386
Sbjct: 1373 A 1373
>gi|327507677|sp|C7GIN5.1|ARO1_YEAS2 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|256274428|gb|EEU09331.1| Aro1p [Saccharomyces cerevisiae JAY291]
Length = 1588
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 47/381 (12%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R K GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTKKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTYSS-----------PDFAGFSVGFPYKEAVMKFCDEVHPLA 314
Y + +P D F T S+ +F G +V P K +M++ DE+ A
Sbjct: 1329 YEILGLPHKFDK----FETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAA 1384
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
+ I AVNT+I + K G NTD I +A+ NG + AG ++
Sbjct: 1385 KVIGAVNTVIPL-GNKKFKGDNTDW----LGIRNAL----INNGVPEYVGHTAG---LVI 1432
Query: 375 GAGGAGRALAFGAKSRGARVV 395
GAGG RA + S G + +
Sbjct: 1433 GAGGTSRAALYALHSLGCKKI 1453
>gi|289191666|ref|YP_003457607.1| shikimate 5-dehydrogenase [Methanocaldococcus sp. FS406-22]
gi|288938116|gb|ADC68871.1| shikimate 5-dehydrogenase [Methanocaldococcus sp. FS406-22]
Length = 284
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+A TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 2 IDAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ AQ I AVNTI + DGK IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEIG 119
Query: 352 ERGYKN 357
+ KN
Sbjct: 120 KVKDKN 125
>gi|433654873|ref|YP_007298581.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293062|gb|AGB18884.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 283
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
H+NA T ++G+I P+GHS P+LHN F +N N +Y+ ++ ++LK +
Sbjct: 2 HVNAKTDIYGIIGHPIGHSLSPLLHNAAFESINLNSVYISFDVYEENLKDAILGIKALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE V+K+ D V A+ I AVNTI + ++G L GYNTD +T ++I
Sbjct: 62 KGINVTVPHKENVIKYLDYVSDEAKLIGAVNTI--KNNNGILEGYNTD----VTGFTESI 115
Query: 351 KERG 354
KE G
Sbjct: 116 KEHG 119
>gi|440684478|ref|YP_007159273.1| shikimate dehydrogenase [Anabaena cylindrica PCC 7122]
gi|428681597|gb|AFZ60363.1| shikimate dehydrogenase [Anabaena cylindrica PCC 7122]
Length = 288
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ TK+ G+I PV HS P++HN + + +Y+P + ++L+ + +++
Sbjct: 2 ISGKTKLLGVIGHPVEHSLSPVMHNAALTKLGLDYVYLPFPIAPENLEIAIAGFTAIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ F E+ P+AQAI AVNT+ R+ +G NTD E I+ ++
Sbjct: 62 GFSVTIPHKQAILPFLTEISPIAQAIGAVNTVTRQ--GNGWVGTNTDVEGFISPLQ---- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ + + V+ G GGA RA+ G G
Sbjct: 116 --------TTYNQDWSQKTAVILGNGGAARAVVAGCIQLG 147
>gi|150261273|pdb|2HK7|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Mercury At 2.5 Angstrom
Resolution
gi|150261274|pdb|2HK7|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Mercury At 2.5 Angstrom
Resolution
gi|150261275|pdb|2HK8|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261276|pdb|2HK8|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261277|pdb|2HK8|C Chain C, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261278|pdb|2HK8|D Chain D, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261279|pdb|2HK8|E Chain E, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261280|pdb|2HK8|F Chain F, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261281|pdb|2HK8|G Chain G, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261282|pdb|2HK8|H Chain H, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
Length = 269
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA T+++G+I PV HS P+ N R+ N +Y+ + ++LKK F + +
Sbjct: 2 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++ D V A+ I AVNT+ + +GK GYNTD + +++ I
Sbjct: 62 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
E + + ++ GAGGA RA+ + GA+V +++
Sbjct: 120 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWN 153
>gi|150261283|pdb|2HK9|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261284|pdb|2HK9|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261285|pdb|2HK9|C Chain C, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261286|pdb|2HK9|D Chain D, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
Length = 275
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA T+++G+I PV HS P+ N R+ N +Y+ + ++LKK F + +
Sbjct: 8 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 67
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++ D V A+ I AVNT+ + +GK GYNTD + +++ I
Sbjct: 68 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 125
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
E + + ++ GAGGA RA+ + GA+V +++
Sbjct: 126 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWN 159
>gi|336122553|ref|YP_004577328.1| 3-dehydroquinate dehydratase [Methanothermococcus okinawensis IH1]
gi|334857074|gb|AEH07550.1| 3-dehydroquinate dehydratase [Methanothermococcus okinawensis IH1]
Length = 218
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ ++V++ L + +A + AD+VE R+D + N I+ P +I
Sbjct: 1 MICIPVIDKNVDEALKSAEKA-LKVADIVEFRVDMLKNVNKDD----IIKMAKYPSIITI 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI-LGKQYSSHQSGTRFIVSC 130
R W GG Y GD +KR+E A + A ++D ELK N L K + S T+ I+S
Sbjct: 56 RADWEGGAYSGDNNKRIELYKTAIENSAKFIDVELKEEKNKELVKFRNDTNSKTKIIISH 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TP ++L +V + G DI K ++ I ++++ + II +GE
Sbjct: 116 HDFEKTPDYDELLKIVKKELEIG-DIAKFATMAKSKKDVLNILKIVNEFEGKIIGIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKG 213
G ++++L F L + S++G
Sbjct: 175 EGKLTRILGVDFGSILTFSSMEG 197
>gi|145577947|gb|ABP82692.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
ostriniae]
Length = 238
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L GAGGA RA+ F G +
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVK 131
>gi|392300242|gb|EIW11333.1| Aro1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1588
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 47/381 (12%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R K GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTKKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTYSS-----------PDFAGFSVGFPYKEAVMKFCDEVHPLA 314
Y + +P D F T S+ +F G +V P K +M++ DE+ A
Sbjct: 1329 YEILGLPHKFDK----FETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAA 1384
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
+ I AVNT+I + K G NTD I +A+ NG + AG ++
Sbjct: 1385 KIIGAVNTVIPL-GNKKFKGDNTDW----LGIRNAL----INNGVPEYVGHTAG---LVI 1432
Query: 375 GAGGAGRALAFGAKSRGARVV 395
GAGG RA + S G + +
Sbjct: 1433 GAGGTSRAALYALHSLGCKKI 1453
>gi|327507678|sp|A6ZY89.1|ARO1_YEAS7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|151942113|gb|EDN60469.1| 3-dehydroquinate dehydratase (3-dehydroquinase) [Saccharomyces
cerevisiae YJM789]
Length = 1588
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 47/381 (12%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R K GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTKKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTYSS-----------PDFAGFSVGFPYKEAVMKFCDEVHPLA 314
Y + +P D F T S+ +F G +V P K +M++ DE+ A
Sbjct: 1329 YEILGLPHKFDK----FETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAA 1384
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
+ I AVNT+I + K G NTD I +A+ NG + AG ++
Sbjct: 1385 KIIGAVNTVIPL-GNKKFKGDNTDW----LGIRNAL----INNGVPEYVGHTAG---LVI 1432
Query: 375 GAGGAGRALAFGAKSRGARVV 395
GAGG RA + S G + +
Sbjct: 1433 GAGGTSRAALYALHSLGCKKI 1453
>gi|145577915|gb|ABP82676.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar sotto]
gi|145577925|gb|ABP82681.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar alesti]
gi|145577955|gb|ABP82696.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
fukuokaensis]
Length = 238
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L GAGGA RA+ F G +
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVK 131
>gi|323305645|gb|EGA59386.1| Aro1p [Saccharomyces cerevisiae FostersB]
gi|349577192|dbj|GAA22361.1| K7_Aro1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1588
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 47/381 (12%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R K GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTKKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTYSS-----------PDFAGFSVGFPYKEAVMKFCDEVHPLA 314
Y + +P D F T S+ +F G +V P K +M++ DE+ A
Sbjct: 1329 YEILGLPHKFDK----FETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAA 1384
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
+ I AVNT+I + K G NTD I +A+ NG + AG ++
Sbjct: 1385 KIIGAVNTVIPL-GNKKFKGDNTDW----LGIRNAL----INNGVPEYVGHTAG---LVI 1432
Query: 375 GAGGAGRALAFGAKSRGARVV 395
GAGG RA + S G + +
Sbjct: 1433 GAGGTSRAALYALHSLGCKKI 1453
>gi|443309942|ref|ZP_21039617.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 7509]
gi|442779995|gb|ELR90213.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 7509]
Length = 291
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS PI+HN H+ + +Y+P+ V D+L+ S +++ D
Sbjct: 5 ITGKTKLLGVIGHPVEHSLSPIMHNAAIAHLGLDYVYLPLPVHPDNLQAAISGFAAIDLV 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A+ E+ A+AI A+NT+ R S G NTD E IT ++
Sbjct: 65 GFNITIPHKQAITPLITEISATAKAIGAINTVWRT-SSSIWAGTNTDVEGFITPLQ---- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ + + ++ G GGA RA+ G G
Sbjct: 120 ---------TYAQNWSEKTALVLGNGGAARAVVAGCAQLG 150
>gi|15606233|ref|NP_213611.1| shikimate 5-dehydrogenase [Aquifex aeolicus VF5]
gi|9087118|sp|O67049.1|AROE_AQUAE RecName: Full=Shikimate dehydrogenase
gi|2983425|gb|AAC07007.1| shikimate 5-dehydrogenase [Aquifex aeolicus VF5]
Length = 269
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA T+++G+I PV HS P+ N R+ N +Y+ + ++LKK F + +
Sbjct: 2 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++ D V A+ I AVNT+ + +GK GYNTD + +++ I
Sbjct: 62 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
E + + ++ GAGGA RA+ + GA+V +++
Sbjct: 120 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWN 153
>gi|334137627|ref|ZP_08511056.1| shikimate dehydrogenase [Paenibacillus sp. HGF7]
gi|333604791|gb|EGL16176.1| shikimate dehydrogenase [Paenibacillus sp. HGF7]
Length = 289
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+++ T ++G+ PV HS+ PI+ N F NG Y V + L++ + + F
Sbjct: 7 LDSGTILYGVFGDPVRHSRSPIMMNRAFGEAGINGAYAAFHVLPEQLEEAVAGIRALGFG 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VMK+ DE+ AQA+ AVNT++ R GKLIGYNTD + ++++
Sbjct: 67 GVNVTIPHKVNVMKYLDEIDADAQALGAVNTVVNR--GGKLIGYNTDGIGYVRSLKE--- 121
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
G L G+ +L GAGGA R +++ G
Sbjct: 122 ---------ETGMDLRGKKVLLIGAGGAARGISYALAKEG 152
>gi|148643239|ref|YP_001273752.1| shikimate 5-dehydrogenase, AroE [Methanobrevibacter smithii ATCC
35061]
gi|166219474|sp|A5UMF6.1|AROE_METS3 RecName: Full=Shikimate dehydrogenase
gi|148552256|gb|ABQ87384.1| shikimate 5-dehydrogenase, AroE [Methanobrevibacter smithii ATCC
35061]
Length = 281
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 20/154 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN TK+ GLI PV HS P +HN F + + YVP V ++LK S +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K VMK+ D++ P+A+ I AVNTI + ++ GYNTD I AI +
Sbjct: 62 GFNVTIPHKINVMKYLDKLDPIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAIGEV-- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
+ + + V+AGAGGA RA++F
Sbjct: 116 ------------TSIKDKNIVVAGAGGASRAISF 137
>gi|222445470|ref|ZP_03607985.1| hypothetical protein METSMIALI_01109 [Methanobrevibacter smithii
DSM 2375]
gi|222435035|gb|EEE42200.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2375]
Length = 281
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 20/154 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN TK+ GLI PV HS P +HN F + + YVP V ++LK S +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K VMK+ D++ P+A+ I AVNTI + ++ GYNTD I AI +
Sbjct: 62 GFNVTIPHKINVMKYLDKLDPIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAIGEV-- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
+ + + V+AGAGGA RA++F
Sbjct: 116 ------------TSIKDKNIVVAGAGGASRAISF 137
>gi|407918714|gb|EKG11980.1| Shikimate kinase [Macrophomina phaseolina MS6]
Length = 1593
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 173/407 (42%), Gaps = 44/407 (10%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCIN-----NFQPGKD-----LE 57
K++ +C L A +E +LS+ + G+D VE+R+D ++ N P D +
Sbjct: 1051 KHSFFVC--LTAPQIE-LLSDSLERVVVGSDAVELRVDLLDDPNAENGIPTADFLIDQIT 1107
Query: 58 IILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQ 116
++ +K LP++ R K GG + + ++ L LA +G +++D E+ +L Q
Sbjct: 1108 LLRSKVTLPLIFTIRSKSQGGNFPDNANEEALRLYKLAVRMGMEFIDLEITYPEELL--Q 1165
Query: 117 YSSHQSGTRFIVSCNLDCETPSEEDLGYLV---SRMQATGADIIKLVFSVNDITEIARIF 173
+ G+ I++ + D + G + SR G D+IKLV I + +
Sbjct: 1166 EIASNKGSSKIIASHHDPKAELSWSNGSWIPFYSRALQFG-DVIKLVGVAKTIQDNFELA 1224
Query: 174 QLLSHCQ----VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTY 229
+ S + VP+I ++G G +S++++ F + + L G G + +R+
Sbjct: 1225 EFKSWAEKTHPVPVIGINMGNVGKLSRIIN-GFMTPVSHPELPGAAAPGQLSAADIRRGL 1283
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD 289
+ + K F + PV S+ P +HN F+ Y + + P+
Sbjct: 1284 SLMG-QIEPKRFFVAGSPVALSRSPPMHNTLFKETGLPHSYDRIETTNAADLKDIIRQPN 1342
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK-------LIGYNTDCEAS 342
F G S+ P K+ V F D V P + I A+NTI+ + L+G NTD +
Sbjct: 1343 FGGASITIPLKQDVRPFIDAVGPEVEVIGALNTIVPEEVTDESGNIKTHLVGRNTDWQGM 1402
Query: 343 ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
+ + ++ E G + ++ G GG RA + S
Sbjct: 1403 VLVLRNSGSEGGSDKQSG-----------LVIGGGGTARAAIYALAS 1438
>gi|312110148|ref|YP_003988464.1| shikimate 5-dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|423719183|ref|ZP_17693365.1| shikimate 5-dehydrogenase [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215249|gb|ADP73853.1| shikimate 5-dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|383368086|gb|EID45361.1| shikimate 5-dehydrogenase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 277
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++ L PV HS P++HN F+H+N Y V+ LK + + +G +V
Sbjct: 3 KLYALFGCPVHHSLSPLMHNDAFQHMNIAARYHAFHVEPKQLKDAINGVRALGISGLNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AV+ D++ P A+ I AVNTI+ +G+LIGYNTD + A+E+ +
Sbjct: 63 IPHKTAVIPLLDDIDPAARRIGAVNTIVN--ENGRLIGYNTDGPGYVQALEEEVH----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ G+ ++ GAGGA R + F +GA+ +
Sbjct: 116 -------IDIKGKRILVIGAGGAARGIYFSLVDKGAKQI 147
>gi|256811286|ref|YP_003128655.1| shikimate 5-dehydrogenase [Methanocaldococcus fervens AG86]
gi|256794486|gb|ACV25155.1| shikimate 5-dehydrogenase [Methanocaldococcus fervens AG86]
Length = 282
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+A TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 2 IDAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ AQ I AVNTI + +GK IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDRDAQLIGAVNTI--KIENGKAIGYNTDGIGARKALEEEIG 119
Query: 352 ERGYKN 357
E KN
Sbjct: 120 EVKGKN 125
>gi|167037479|ref|YP_001665057.1| shikimate 5-dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115893|ref|YP_004186052.1| shikimate 5-dehydrogenase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856313|gb|ABY94721.1| shikimate 5-dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928984|gb|ADV79669.1| shikimate 5-dehydrogenase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 284
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN++TK++GLI PV HS P++HN F+ +N N +Y V + L+ + S
Sbjct: 2 EINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKSLGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 62 KGVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDV----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
G+ + G + GR V+ GAGGA +A+ +G +I
Sbjct: 109 --YGFIDSLTEVGKKIEGRKAVVLGAGGASKAVCVALALKGIDSIII 153
>gi|145577919|gb|ABP82678.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
wratislaviensis]
gi|145577933|gb|ABP82685.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
shandongiensis]
Length = 237
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M + DE
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTTPHKVAIMDYLDE 60
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL +
Sbjct: 61 IDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQEK 106
Query: 370 MFVLAGAGGAGRALAFGAKSRGAR 393
+L GAGGA RA+ F G +
Sbjct: 107 RILLLGAGGASRAIYFSLADVGVK 130
>gi|374603053|ref|ZP_09676038.1| shikimate 5-dehydrogenase [Paenibacillus dendritiformis C454]
gi|374391366|gb|EHQ62703.1| shikimate 5-dehydrogenase [Paenibacillus dendritiformis C454]
Length = 297
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ T VF +I P+ HSK P++HN R + N +Y V + L++ +
Sbjct: 16 IDSSTAVFAVIGDPIKHSKSPLMHNAALRELGLNAVYTAFHVAPEQLEQAIQGMRALGIG 75
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V P+KEAVM + DEV A I AVNTI+ R +G+LIGYNTD
Sbjct: 76 GMNVTIPHKEAVMAYLDEVDESASVIGAVNTIVNR--NGRLIGYNTD 120
>gi|282895773|ref|ZP_06303860.1| aroK (Quinate/Shikimate 5-dehydrogenase) [Raphidiopsis brookii D9]
gi|281199273|gb|EFA74139.1| aroK (Quinate/Shikimate 5-dehydrogenase) [Raphidiopsis brookii D9]
Length = 303
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN H+ + +Y+P + D+L++ + ++S
Sbjct: 12 ITGKTKIMGVIGYPVEHSLSPLMHNAALDHLGLDYVYLPFPIAPDNLQEAIACFASIGVV 71
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+A++ ++ P+AQAI AVNT+IR K +G NTD I ++
Sbjct: 72 GFNVTIPHKQAIIPLLHDLSPIAQAIGAVNTVIR--VGEKWVGTNTDVAGFIAPLQSTYN 129
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ ++ + V+ G GGA +A+ G G
Sbjct: 130 QNWHE------------KKAVVIGNGGAAKAVVAGCIQLG 157
>gi|418120030|ref|ZP_12756981.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA18523]
gi|418198134|ref|ZP_12834594.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA47778]
gi|353789143|gb|EHD69539.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA18523]
gi|353862772|gb|EHE42702.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA47778]
Length = 506
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 143/308 (46%), Gaps = 37/308 (12%)
Query: 89 EALHLAEDLGA----DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
E +HL +++ DY+DFE ++ + ++S + ETP E++
Sbjct: 76 EYIHLIKEVAQFYQPDYIDFEYYSYKDV----FEEMLDFPNLVLSYHNFQETP--ENMME 129
Query: 145 LVSRMQATGADIIKLVF------SVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLL 198
++S + ++K+ V D+ R F+ L+ Q + S+G+ G VS++
Sbjct: 130 ILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFKTLNPEQ-EYVTISMGKVGKVSRIT 188
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE-HINADTKVFGLISKPVGHSKGPILH 257
+ + + SL G ++ S++++ + ++ T++ +++ P+ HS P +H
Sbjct: 189 ADVTGSSWSFASLDEVSAPGQISLASMKKSGRFWMKLDGYTRLAAVVANPIKHSISPFIH 248
Query: 258 NPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
N F NG YV ++ DL + + G ++ PYKE V+ + D++ A+
Sbjct: 249 NRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEAR 308
Query: 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
I AVNT++ +G LIGYNTD +G+ SF ++G+ L G
Sbjct: 309 LIGAVNTVVNE--NGNLIGYNTDG-------------KGFFKCLPSFT--ISGKKMTLLG 351
Query: 376 AGGAGRAL 383
AGGA +++
Sbjct: 352 AGGAAKSI 359
>gi|145577913|gb|ABP82675.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
seoulensis]
Length = 237
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M + DE
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTTPHKVAIMDYLDE 60
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL +
Sbjct: 61 IDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQEK 106
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVV 395
+L GAGGA RA+ F G + +
Sbjct: 107 RILLLGAGGASRAIYFSLADVGVKEI 132
>gi|336114442|ref|YP_004569209.1| shikimate 5-dehydrogenase [Bacillus coagulans 2-6]
gi|335367872|gb|AEH53823.1| shikimate 5-dehydrogenase [Bacillus coagulans 2-6]
Length = 280
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 16/158 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I P+ HS P +HN FR + + Y V ++L+ + + AGF+V
Sbjct: 4 LYGVIGDPIAHSLSPAMHNEAFRALGLDADYHAFHVTPENLEAAVNGMKAIGVAGFNVTI 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K+A+M + D++ PLA+ I AVNT+IR P +GYNTD + A+++
Sbjct: 64 PHKQAIMPYLDDIDPLAETIGAVNTVIRTPHG--WVGYNTDGPGFMQALKE--------- 112
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G L+G ++ GAGGA RA+ + GA V
Sbjct: 113 ---ESGRVLSGEKVLVIGAGGAARAIYYTLCREGAVTV 147
>gi|389853036|ref|YP_006355270.1| shikimate 5-dehydrogenase [Pyrococcus sp. ST04]
gi|388250342|gb|AFK23195.1| shikimate 5-dehydrogenase [Pyrococcus sp. ST04]
Length = 273
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDFA 291
+N +TKV+ +I KPV HS P++HN F+ N +YV +F + L+ + A
Sbjct: 1 MNGETKVYAVIGKPVRHSLSPVMHNALFKKYGINAVYVAFEVFPEQLRDAILGVRALGIA 60
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
G +V P+KE ++++ D+V P ++AI++VNT+I S+G+LIGY TD + A+E
Sbjct: 61 GLNVTMPHKEKIIEYLDKVSPDSKAISSVNTVIN--SNGELIGYTTDGTGARKALE 114
>gi|186684355|ref|YP_001867551.1| shikimate 5-dehydrogenase [Nostoc punctiforme PCC 73102]
gi|186466807|gb|ACC82608.1| shikimate 5-dehydrogenase [Nostoc punctiforme PCC 73102]
Length = 295
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P +HN ++ + +Y+P + ++L+ + ++
Sbjct: 7 ITGKTKLLGVIGHPVEHSLSPAMHNAAIANLGLDYVYLPFPIAPENLEVAIAGFAVIGVV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A+M E+ PLAQ I AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 67 GFSVTIPHKQAIMPLLSEITPLAQMIGAVNTVSRQ--NNQWVGTNTDIEGFIAPLQTTYK 124
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ + ++ V+ G GGA RA+ G G
Sbjct: 125 QDWSQ------------KVAVILGNGGAARAVVAGCHQLG 152
>gi|320352427|ref|YP_004193766.1| 3-dehydroquinate dehydratase [Desulfobulbus propionicus DSM 2032]
gi|320120929|gb|ADW16475.1| 3-dehydroquinate dehydratase, type I [Desulfobulbus propionicus DSM
2032]
Length = 233
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 38 DVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97
DVVEIRLD + + Q G+ + PVL RP W GG + G E +R+ L A
Sbjct: 33 DVVEIRLDGMRDPQCGQ----CIAALDKPVLATNRPAWEGGQWTGSEEERVNLLCAALRW 88
Query: 98 GADYVDFELKVASNILGKQYS-SHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADI 156
GA YVD EL AS + + +H+ + IVS + TP L + +M A+GADI
Sbjct: 89 GARYVDVELATASELQAQIIQEAHRHQAKVIVSSHDFDGTPDAAQLHATLQQMMASGADI 148
Query: 157 IKLVFSVNDITEIARIFQL----LSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLK 212
K+V + E+ R+ L L+H P+ A+++G G +S+ + G + Y +L
Sbjct: 149 GKIVTTAVSAAEVLRVLALQQDALAH-DFPLCAFAMGRAGTISRFATLFLGGFMTYAALS 207
>gi|124026892|ref|YP_001016007.1| shikimate 5-dehydrogenase [Prochlorococcus marinus str. NATL1A]
gi|123961960|gb|ABM76743.1| Shikimate / quinate 5-dehydrogenase [Prochlorococcus marinus str.
NATL1A]
Length = 311
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSS 287
K+ I T + GL+ +PV HS PI+HN + + + YV P DL+K
Sbjct: 16 KMSTITGKTNLVGLLGQPVNHSLSPIMHNAAYEEMGLDWCYVAMPCHSQDLEKVTKALRF 75
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
DF G ++ P+K+ V+K C+++ +A I AVNT+I + + IG NTD + +T ++
Sbjct: 76 LDFKGLNITIPHKQEVLKACNKLTEIANDIQAVNTLIPE-KNNQWIGANTDVQGFLTPLK 134
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
D L + V+ G GG+ RA+ G S + V
Sbjct: 135 D---------------HNLKNKSVVVIGCGGSARAVVMGLSSLNIKKV 167
>gi|425054313|ref|ZP_18457820.1| shikimate dehydrogenase [Enterococcus faecium 505]
gi|403036076|gb|EJY47444.1| shikimate dehydrogenase [Enterococcus faecium 505]
Length = 284
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F + + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANDIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + L GAGGA +A+ A GA ++
Sbjct: 118 -----------GISIEKKKMTLLGAGGASKAVTVQAALDGAEEIV 151
>gi|367015874|ref|XP_003682436.1| hypothetical protein TDEL_0F04140 [Torulaspora delbrueckii]
gi|359750098|emb|CCE93225.1| hypothetical protein TDEL_0F04140 [Torulaspora delbrueckii]
Length = 1587
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 172/404 (42%), Gaps = 46/404 (11%)
Query: 7 TKNTTMICAPL--MAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEIILT 61
TK ++ +C + + V+ + + +Y G D VE+R+D + K L ++ T
Sbjct: 1072 TKRSSFVCLTFDDLRKKVDDLPAIVY-----GCDAVEVRVDHLAKLDADYVSKQLSLLRT 1126
Query: 62 -KKPLPVLIVYRPKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSS 119
LP++ R K GG + ++++ LE L A G +++D EL + + + QY
Sbjct: 1127 ATDSLPIIFTIRTKKQGGKFPDEDYQCLEDLFRTALKAGVEFIDLELTLPTQL---QYKV 1183
Query: 120 -HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQ---ATGADIIKLV---FSVNDITEIARI 172
+ G I+ + D + D +R + D+IK V S D + R
Sbjct: 1184 LNNKGFTKIIGSHHDFDGAFSWDNAEWENRYNQALSLDVDVIKFVGMAKSFEDNLALERF 1243
Query: 173 FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE 232
+H P+IA ++ E G VS++L+ + L G T+ + QTY
Sbjct: 1244 RG--NHKSKPLIAINMSEFGKVSRVLNTVLT-PITSELLPNAAAPGQLTLAQINQTY-TS 1299
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD---DLKKFFSTYSSPD 289
K F ++ KP+GHS+ PILHN ++ + + D D+KK S +
Sbjct: 1300 MGGIQPKEFYVVGKPIGHSRSPILHNTGYKLLGLPHTFDKYETDLAADIKKELLDGKS-N 1358
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K +MK+ E+ A+ + AVNT+ + G NTD
Sbjct: 1359 LGGLAVTIPLKLDIMKYMSELTEAAKLVGAVNTVTPL-GNSNFQGDNTDW---------- 1407
Query: 350 IKERGYKNGTASFGSP--LAGRMFVLAGAGGAGRALAFGAKSRG 391
G +N G P LAG ++ GAGG RA + S G
Sbjct: 1408 ---LGIRNALIGNGVPESLAGVSGLVIGAGGTSRAAIYALHSLG 1448
>gi|358057337|dbj|GAA96686.1| hypothetical protein E5Q_03357 [Mixia osmundae IAM 14324]
Length = 1608
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 167/389 (42%), Gaps = 47/389 (12%)
Query: 36 GADVVEIRLDCINNFQ-PGK-----------DLEIILTKKPLPVLIVYRPKWAGGLYEGD 83
G D +E+R+D + Q P K L + LP++ R GG + D
Sbjct: 1121 GVDAIELRVDLLTGSQAPSKPFVPSTKYVSLQLAQLRRHTSLPIIFTVRTVSQGGFFPDD 1180
Query: 84 -EHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE-----TP 137
+ + L LA +YVD E++ + L K + QS I++ D
Sbjct: 1181 AQEAYFDLLTLAVRQACEYVDLEMQWPTGALSKFVRAKQSS--LILASFHDWSGVHKWKS 1238
Query: 138 SEEDLGYLVSRMQATGADIIKLVFSVNDITEIARI--FQLLSHCQVPIIAYSVGERGLVS 195
+ D Y +R G D++K+V +T+ + + F+ P++ ++G G +S
Sbjct: 1239 TAIDAAY--ARASLYG-DVVKIVLKAQSMTDNSEMLSFRAAHASGKPLLTVNMGTVGQLS 1295
Query: 196 QLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPI 255
++L+P + + + +L G V ++Q + K F L+ +P+ SK P+
Sbjct: 1296 RILNPVLS-PVTHPALPAAAAPGQLAVYQIQQALSLIG-QISVKRFALLGQPISASKSPL 1353
Query: 256 LHNPTFRHV---NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312
LHN F + + G+ VD+ + F S DF G SV P+K A++ CDEV
Sbjct: 1354 LHNTGFAALGLPHTYGLLETAEVDESVRDF--VRSSDFGGASVTIPHKTAIIALCDEVSE 1411
Query: 313 LAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 370
+ I A NT+ ++R S L G NTD ++ I A + A
Sbjct: 1412 AVRIIGACNTLVPVQRGSQIILRGENTDFRGIVSII------------AAEQLAITADSH 1459
Query: 371 FVLAGAGGAGRALAFGAKSRG-ARVVIFD 398
++ GAGG RA + G AR+++++
Sbjct: 1460 ALVIGAGGTARAAVYALHQAGFARILLYN 1488
>gi|399925231|ref|ZP_10782589.1| shikimate kinase [Peptoniphilus rhinitidis 1-13]
Length = 503
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 21/143 (14%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
+GLI + + HSK +H +FR NYN + LK FF +F G +V PYK
Sbjct: 93 YGLIGESLSHSKSKEIH-ESFRKYNYNLKNIEK--SKLKDFFK---KRNFTGINVTIPYK 146
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E +K+ D++ PLA+ I AVNTI+ R +GKLIGYNTD G+
Sbjct: 147 ETSLKYLDKIDPLAKEIGAVNTIVNR--NGKLIGYNTDY-------------LGFSYSIK 191
Query: 361 SFGSPLAGRMFVLAGAGGAGRAL 383
FG L + ++ G+GGA + +
Sbjct: 192 HFGISLKNKKVLILGSGGASKMV 214
>gi|294790687|ref|ZP_06755845.1| shikimate dehydrogenase [Scardovia inopinata F0304]
gi|294458584|gb|EFG26937.1| shikimate dehydrogenase [Scardovia inopinata F0304]
Length = 302
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ +T++ GLI+ P HS P++HN +F N Y V D L+ + +
Sbjct: 8 IDGNTRIAGLIAHPARHSLSPLMHNLSFISRGINARYCAFDVEADQLEAAIESIRALKML 67
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYKEAV+ F D++ + + +VNTI+ R G L GY TD + +++K
Sbjct: 68 GANVSMPYKEAVIPFLDQLDQTSSLVGSVNTIVNR--QGILTGYTTDG----LGLVNSLK 121
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD 398
RGY + G+ LAGAGGAG +A A GA ++ IF+
Sbjct: 122 ARGYS---------IEGKKITLAGAGGAGSPIAIQAALSGAGQISIFN 160
>gi|117923340|ref|YP_863957.1| shikimate dehydrogenase [Magnetococcus marinus MC-1]
gi|170652874|sp|A0L3K8.1|AROE_MAGSM RecName: Full=Shikimate dehydrogenase
gi|117607096|gb|ABK42551.1| shikimate dehydrogenase [Magnetococcus marinus MC-1]
Length = 286
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 16/172 (9%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSS 287
K +IN +T + +I PV HS P +HN RH N YV P+ +L + +++
Sbjct: 4 KALNINGETGLLAVIGDPVSHSLSPKMHNLALRHCQLNYCYVALPVKPHNLVRAVQGFAA 63
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
GF+ P+KE ++ + A I AVNT++ DGK+ G+NTD IT ++
Sbjct: 64 MGMRGFNATIPHKENLLPLMHTLSEEASHIGAVNTVVID-DDGKMTGHNTDAYGFITGLK 122
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFD 398
+A + S L+G ++ G+GGA RA+ +G +++ ARV+I +
Sbjct: 123 EAWR------------SDLSGLTAIMLGSGGAARAILYGLIQAKAARVIIAN 162
>gi|418096456|ref|ZP_12733568.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA16531]
gi|353769141|gb|EHD49662.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA16531]
Length = 506
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 143/308 (46%), Gaps = 37/308 (12%)
Query: 89 EALHLAEDLGA----DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
E +HL +++ DY+DFE ++ + ++S + ETP E++
Sbjct: 76 EYIHLIKEVAQFYQPDYIDFEYYSYKDV----FEEMLDFPNLVLSYHNFQETP--ENMME 129
Query: 145 LVSRMQATGADIIKLVF------SVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLL 198
++S + ++K+ V D+ R F+ L+ Q + S+G+ G VS++
Sbjct: 130 ILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFKTLNPEQ-EYVTISMGKVGKVSRIT 188
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE-HINADTKVFGLISKPVGHSKGPILH 257
+ + + SL G ++ S++++ + ++ T++ +++ P+ HS P +H
Sbjct: 189 ADVTGSSWSFASLDEVSAPGQISLASMKKSGRFWMKLDGYTRLAAVVANPIKHSISPFIH 248
Query: 258 NPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
N F NG YV ++ DL + + G ++ PYKE V+ + D++ A+
Sbjct: 249 NRAFEATATNGAYVAWEIEASDLVETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEAR 308
Query: 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
I AVNT++ +G LIGYNTD +G+ SF ++G+ L G
Sbjct: 309 LIGAVNTVVNE--NGNLIGYNTDG-------------KGFFKCLPSFT--ISGKKMTLLG 351
Query: 376 AGGAGRAL 383
AGGA +++
Sbjct: 352 AGGAAKSI 359
>gi|145577929|gb|ABP82683.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
pulsiensis]
Length = 238
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L GAGGA RA+ F G +
Sbjct: 107 KRILLLGAGGASRAIYFSLADAGVK 131
>gi|440635900|gb|ELR05819.1| hypothetical protein GMDG_01896 [Geomyces destructans 20631-21]
Length = 984
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 166/376 (44%), Gaps = 41/376 (10%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + P D + ++ + LP++ R GG + D H
Sbjct: 494 GSDAVELRVDLLVDPASEDGIPTLDFVYEQVSLLRSAISLPLIFTIRTVGQGGRFPNDAH 553
Query: 86 KRLEALHLAE-DLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+ AL+ A + +Y+D E++ + +L S++ ++ I S + T S ++ G+
Sbjct: 554 SQALALYKAAIRMAIEYIDVEIQFPTELL-HTVCSNKGLSKIIASHHDPSGTLSWKNAGW 612
Query: 145 LVSRMQATG-ADIIKLV---FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSP 200
+A DIIKLV S++D +A+ +SH + P+IA ++G +G +S++L
Sbjct: 613 AQYYNRALEYGDIIKLVGVAKSMDDNFALAKFKNDMSH-ETPLIAINMGAKGKLSRVL-- 669
Query: 201 KFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPILHN 258
NG + S P P S + + + + + L KP+ S+ P LHN
Sbjct: 670 --NGFMTPVSHPALPFKAAPGQLSATEIRSGLSLLGELEPQNYYLFGKPISASRSPALHN 727
Query: 259 PTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIA 318
F+ + +Y D + S F G SV P K V+ D + A+ I
Sbjct: 728 KLFKKNGLSDVYGLFETDVAQDIEQVLKSESFGGASVTIPLKLDVIPLLDNLSEAAKTIG 787
Query: 319 AVNTI--IRRPSDG-KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
AVNTI +R ++ L G NTD I+ + G + G+ ++ G
Sbjct: 788 AVNTIAKVRSSTNSTTLFGDNTDW----IGIQKTLAAAGAQPGSG-----------LVIG 832
Query: 376 AGGAGRALAFGAKSRG 391
+GG RA F +S G
Sbjct: 833 SGGTARAAIFALQSTG 848
>gi|145577897|gb|ABP82667.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L GAGGA RA+ F G +
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVK 131
>gi|145577893|gb|ABP82665.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
gi|145577895|gb|ABP82666.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
Length = 238
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L GAGGA RA+ F G +
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVK 131
>gi|145577949|gb|ABP82693.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
tohokuensis]
Length = 238
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K ++MK+ D
Sbjct: 1 SLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVTTPHKVSIMKYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R D KLIGYNTD + +++ KE PL
Sbjct: 61 EIDPLAKQIGAVNTVVHR--DRKLIGYNTDGIGYVRSLQSISKE------------PLYQ 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV 395
+ +L GAGGA RA+ F G + +
Sbjct: 107 KRILLLGAGGACRAIYFSLADAGVKEI 133
>gi|145577957|gb|ABP82697.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
poloniensis]
Length = 238
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L GAGGA RA+ F G +
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVK 131
>gi|300914225|ref|ZP_07131541.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X561]
gi|300889160|gb|EFK84306.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X561]
Length = 292
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN++TK++GLI PV HS P++HN F+ +N N +Y V + L+ + +
Sbjct: 10 EINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGI 69
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 70 KGVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDV----------- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
G+ + G + GR V+ GAGGA +A+ +G +I
Sbjct: 117 --YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIII 161
>gi|443921461|gb|ELU41077.1| aromatic amino acid family biosynthesis-related protein
[Rhizoctonia solani AG-1 IA]
Length = 537
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 122/281 (43%), Gaps = 40/281 (14%)
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITE--IARIFQLLSHCQVPIIAY 186
S N+ P ++ L R+ DI+K+V N I + R F SH P I
Sbjct: 21 SGNMKWNGPVVKEKYALAERV----GDIVKIVGKANSIEDNFALRAFAA-SHTSKPFIGI 75
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLI 244
++G G +S++L+ F S P P S++ + H+N + F L
Sbjct: 76 NMGAEGQLSRVLNTTFTPV----SHPLLPTRAAPGQMSVQDIHTALHLNGQLPAQKFYLF 131
Query: 245 SKPVGHSKGPILHNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
P+ HS P LHN F + Y+ P D++K + +PDF G SV P K
Sbjct: 132 GSPIAHSMSPHLHNTGFEKLGLPHKYHIFETPTITDEVK---AAIRAPDFGGASVTIPLK 188
Query: 301 EAVMKFCDEVHPLAQAIAAVNTII-RRPSDG--KLIGYNTDCEASITAIEDAIKER---G 354
++ DEV P A+AI AVNT+I R+ +DG L G NTD AI D + G
Sbjct: 189 LDIIPLLDEVSPEAKAIGAVNTVIPRKRADGSTSLFGTNTDWR----AIHDLARNNLVVG 244
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ T + ++ GAGG RA + + G + +
Sbjct: 245 ITDETTA----------LVLGAGGTARAALYAIHALGIKTI 275
>gi|390596086|gb|EIN05489.1| Pentafunctional AroM protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1627
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 176/408 (43%), Gaps = 55/408 (13%)
Query: 22 VEQVLSNMYQAKAEGADVVEIRLDC------INNFQPG---------KDLEIILTKKPLP 66
V L++M A EG D VE+R+D I + QPG L + LP
Sbjct: 1096 VTPALAHM-DALTEGVDAVELRVDLLRRPQDIGSAQPGYIPPVAYVADQLAALRRATSLP 1154
Query: 67 VLIVYRPKWAGGLYEGD-EHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
V+ R GG + D E + E LA L A+YVD E+ + + + + ++ + ++
Sbjct: 1155 VVFTVRTASQGGAFPDDAEKEAFELADLALRLAAEYVDVEISWSEDRI-RDLATRKGHSQ 1213
Query: 126 FIVSCN--LDCETPSEEDLGYLVSRMQATGADIIKLV---------FSVNDITEIARIFQ 174
I S + T S D R A G DI+KLV F+++D +AR +
Sbjct: 1214 IIASWHDFSGNMTWSAVDTLRKHDRAHALG-DIVKLVGFAETLEDNFALHDF--VAR--R 1268
Query: 175 LLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI 234
+ PIIA ++G G +S++L + + V +L P P + Q H+
Sbjct: 1269 SAAPGAKPIIALNMGTEGQMSRVLGGWSSFSPVTHAL--LPSRAAPGQLTFAQVQTALHL 1326
Query: 235 --NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
+ F L+ P+ HS P+LHN F + Y + D ++ + + DF
Sbjct: 1327 LGQLPARRFYLLGNPIAHSPSPVLHNTGFAVLGLPHRYALLQTATVDEEEVRAAMRAADF 1386
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPS-DGK--LIGYNTDCEASITAIE 347
G SV P+K +M DE+ A+AI AVNT++ R DG L G NTD I
Sbjct: 1387 GGASVTIPFKRDIMAELDELSEHAKAIGAVNTVVARARPDGTRYLFGDNTDW----LGIR 1442
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
++ R A P AG ++ GAGG RA + + G + V
Sbjct: 1443 ACVRAR-----LAGAAVPEAG---LVIGAGGTARAAIYALRGLGVKTV 1482
>gi|206889174|ref|YP_002248270.1| shikimate 5-dehydrogenase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226697499|sp|B5YJ55.1|AROE_THEYD RecName: Full=Shikimate dehydrogenase
gi|206741112|gb|ACI20169.1| shikimate 5-dehydrogenase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 275
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+ P+ H+ P++HN F ++ + YV V D LK+ + +
Sbjct: 2 ITGKTKIIGIFGDPIEHTLSPLIHNEAFSYLGLDYCYVAFNVKKDKLKEAVEAIRALNIR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+KE V+++ DE+ + I AVNTI+ ++G L G+NTD I +++D
Sbjct: 62 GVNITVPHKETVIQYIDELSDEVKNIGAVNTILN--NEGILKGFNTDVNGFILSLKDE-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
G + + F++ GAGGA +A+ +G G +V I++
Sbjct: 118 -----------GISMKNKNFLILGAGGAAKAIVYGILKEGGKVYIYN 153
>gi|403668288|ref|ZP_10933563.1| shikimate dehydrogenase [Kurthia sp. JC8E]
Length = 279
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K + +I P+ HS P +HN + Y+P+ V + L+ F +GF+V
Sbjct: 5 KWYAVIGDPIEHSMSPFMHNLWMTSEGRDATYIPLHVSRESLRASFEGMKVLGCSGFNVT 64
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KEA++ DEV LA+ + AVNT++R+ +DGK GYNTD + ++ED +
Sbjct: 65 IPHKEAIIPLLDEVDALAEKMGAVNTVVRQ-ADGKYKGYNTDGLGFVRSLEDVV------ 117
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
G+ ++ GAGGA R + F G R
Sbjct: 118 ------GTSHKQEKVLVLGAGGASRGICFALWQEGYR 148
>gi|366990411|ref|XP_003674973.1| hypothetical protein NCAS_0B05170 [Naumovozyma castellii CBS 4309]
gi|342300837|emb|CCC68601.1| hypothetical protein NCAS_0B05170 [Naumovozyma castellii CBS 4309]
Length = 1569
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 168/379 (44%), Gaps = 51/379 (13%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILT-KKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G D VE+R+D + ++ L I+ T LP++ R K GG + +++ ++ L
Sbjct: 1080 GCDAVEVRIDHLAHYDSDFINTQLAILRTATNSLPIIFTIRTKKQGGNFPDNDYDAMDEL 1139
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYS--SHQSGTRFIVSCNLDCETPSEEDLGYLVSR 148
+ A G +Y+D EL + ++I QY +++ T+ I S + + S +D +
Sbjct: 1140 YSTALKSGVEYIDLELTLPTSI---QYKVLNNKGYTKIIGSHHDFAASYSWDDPEWENRY 1196
Query: 149 MQATG--ADIIKLVFSVNDITEIARIFQLLS-HCQVPIIAYSVGERGLVSQLLSPKFNGA 205
QA D++K V + + + + + H P+IA ++ E G VS++L N
Sbjct: 1197 NQALSLDVDVVKFVGTATEFKDNLMLENFRNCHQAKPLIAINMTELGKVSRVL----NTI 1252
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK-------PVGHSKGPILHN 258
L + + P P SLRQ ++ T + G ISK P+GHS+ P+LHN
Sbjct: 1253 LTPITSELLPNASAPGQLSLRQINEIY-----TSMGGFISKDFYVVGSPIGHSRSPVLHN 1307
Query: 259 PTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
++ + N++ + KK S + G +V P K +M++ E+ A
Sbjct: 1308 TGYKLLGLPNNFDKFETDSAEEVNKKLLLGKS--NLGGLAVTIPLKLDIMRYMTELTEAA 1365
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP--LAGRMFV 372
+ I AVNT+I GK G NTD G +N + G P + G +
Sbjct: 1366 EHIGAVNTVIPL-GHGKFKGDNTDW-------------LGIRNSLIANGVPESVRGSAGL 1411
Query: 373 LAGAGGAGRALAFGAKSRG 391
+ GAGG RA F G
Sbjct: 1412 IIGAGGTSRAAIFALHKMG 1430
>gi|401624332|gb|EJS42394.1| aro1p [Saccharomyces arboricola H-6]
Length = 1588
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 167/374 (44%), Gaps = 33/374 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ + +P++ R K GG + +E + L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATESIPIIFTVRTKKQGGHFPDEEFQTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YNIALKNGVEFIDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + D + + + +H P+IA ++ +G +S++L N
Sbjct: 1216 NQALTLDVDVVKFVGTAVDFEDNLSLERFRDTHKSKPLIAVNMTSKGSISRVL----NNI 1271
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKV--EHINADTKVFGLISKPVGHSKGPILHNPTFRH 263
L + P P ++ Q K+ + K ++ KP+GHS+ PILHN ++
Sbjct: 1272 LTPVTSDLLPNAAAPGQLTIAQINKIYTSMGGIEPKELFVVGKPIGHSRSPILHNTGYQI 1331
Query: 264 VNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVN 321
+ + D +L K + +F G +V P K +MK+ DE+ A+ I AVN
Sbjct: 1332 LGLPHKFDKFETDSAELVKEKLLNGNNNFGGAAVTIPLKLDIMKYMDELTDSAKVIGAVN 1391
Query: 322 TIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGR 381
T+I + K G NTD I +A+ NG AG ++ GAGG R
Sbjct: 1392 TVIPL-GNNKFRGDNTDW----LGIRNAL----IGNGVPESVGHTAG---LVIGAGGTSR 1439
Query: 382 ALAFGAKSRGARVV 395
A + S G + +
Sbjct: 1440 AAIYALHSLGCKKI 1453
>gi|167040141|ref|YP_001663126.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X514]
gi|307724540|ref|YP_003904291.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X513]
gi|166854381|gb|ABY92790.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X514]
gi|307581601|gb|ADN55000.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X513]
Length = 284
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN++TK++GLI PV HS P++HN F+ +N N +Y V + L+ + +
Sbjct: 2 EINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 62 KGVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDV----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
G+ + G + GR V+ GAGGA +A+ +G +I
Sbjct: 109 --YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIII 153
>gi|330912729|ref|XP_003296056.1| hypothetical protein PTT_04545 [Pyrenophora teres f. teres 0-1]
gi|311332121|gb|EFQ95851.1| hypothetical protein PTT_04545 [Pyrenophora teres f. teres 0-1]
Length = 1591
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 159/385 (41%), Gaps = 51/385 (13%)
Query: 36 GADVVEIRLDCINNFQPGKD-----------LEIILTKKPLPVLIVYRPKWAGGLYEGDE 84
G+D VE+R+D + + + GK+ L I+ T +PV+ R K GG + +
Sbjct: 1084 GSDAVELRVDLLEDPK-GKEGLPTPEFVVEQLTILRTATSIPVIFTLRTKAQGGRFPDEA 1142
Query: 85 HKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLG 143
+ L+ A LG ++VD E+ + +IL + S G I++ + D P E
Sbjct: 1143 YDEAAVLYRTALRLGCEFVDLEMTMPEDIL--REVSETRGFSEIIASHHD---PKGELNW 1197
Query: 144 YLVSRMQATG-----ADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLV 194
S MQ +IKLV + + + + + S VP+IA ++GE G +
Sbjct: 1198 RNGSWMQYYNRALQYGTVIKLVGVASSLEDNFALAEFKSWANTAHPVPLIAINMGEHGKL 1257
Query: 195 SQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGP 254
S++L+ F + + L G + +R+ + T+ F + P+ S P
Sbjct: 1258 SRILN-GFMTPVSHPLLPSATAPGQLSAADIRRGLSLMG-EVPTQKFFIFGSPIAQSPSP 1315
Query: 255 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
LHN FR IY D SP+F G SV P K+ V+ + + P
Sbjct: 1316 RLHNRLFRETGLPHIYGRHETTDASSIKEIIRSPEFGGASVTIPLKQDVVPLLNGLGPEV 1375
Query: 315 QAIAAVNTIIRRPS----DGK----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
+ I A+NTI+ S GK LIG NTD + + A G GS L
Sbjct: 1376 EVIGALNTIVPETSIDEATGKEVTRLIGRNTDYLGMVLILRKA--------GAQGSGSAL 1427
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRG 391
+ G GG RA + K G
Sbjct: 1428 ------VIGGGGTSRAAVYALKEMG 1446
>gi|340624235|ref|YP_004742688.1| shikimate 5-dehydrogenase [Methanococcus maripaludis X1]
gi|339904503|gb|AEK19945.1| shikimate 5-dehydrogenase [Methanococcus maripaludis X1]
Length = 278
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN+ TK+ GLI PV HS P++HN + + N Y V ++LK + + +F
Sbjct: 2 INSKTKLVGLIGHPVDHSFSPLMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNITIPHKMNIMKYLDEIDSDAEAIGAVNTV--KIENGKAIGYNTDGIGVKKALEE--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
K G L + ++ G+GGA RA++F
Sbjct: 117 ----KTGI------LYDKNILIIGSGGASRAVSF 140
>gi|326390171|ref|ZP_08211732.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
gi|325993819|gb|EGD52250.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
Length = 292
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN+ TK++GLI PV HS P++HN F+ +N N +Y V + L+ +
Sbjct: 10 EINSSTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTAFDVLPEKLEDAVKGAKALGI 69
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P+KE ++K+ D V A I AVNT++ G L GYNTD
Sbjct: 70 KGFNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDV----------- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ + G + GR V+ GAGGA +A+ +G +I
Sbjct: 117 --YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSII 160
>gi|387761673|ref|YP_006068650.1| shikimate 5-dehydrogenase [Streptococcus salivarius 57.I]
gi|339292440|gb|AEJ53787.1| shikimate 5-dehydrogenase [Streptococcus salivarius 57.I]
Length = 285
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G+ +F SP + +L GAGGA +A+ A A+ V
Sbjct: 109 --FGFFASLKNF-SPRDAHLTIL-GAGGAAKAIVTQAVLDDAKKV 149
>gi|440527964|emb|CCP53448.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis D/SotonD5]
Length = 478
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 166/395 (42%), Gaps = 45/395 (11%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T I P ++ +Q+L ++ + V + + C+ +L+ ++ P+ +L
Sbjct: 4 TTISGPSFLEAKKQILRSLKECHCFEMRVDLLSVSCL-------ELKKLMELAPISILAW 56
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+P+ + D ++++L +L +Y+D E + + H + I S
Sbjct: 57 KKPESCS---QADWIDKMQSL---AELNPNYLDLEKDFPEEDMIRIRQLHPQ-IKIIRSL 109
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ T D+ L + M+++ AD K S + T++ I +G
Sbjct: 110 H----TSEHTDIIQLYAHMRSSAADYYKFAVSSSSTTDLLDICHQKRSLPENTTVVCLGG 165
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTY--KVEHINADTKVFGLI---S 245
G S++LSP Y G+ + P SL+ Y ++A + + LI S
Sbjct: 166 MGRPSRILSPILQNPFTYARSTGSSPVA-PGQFSLKHHYFYNFASLSAQSPICALIGDTS 224
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
+ +GH + HNP F + Y+ P+ +L KFFST + F G SV P K AV
Sbjct: 225 RSIGH----LTHNPFFSQLGVACPYIKLPLTSQELPKFFSTIRTQPFLGVSVTSPLKTAV 280
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ F D+ P +A + NT++ R G++ G++TD E G +
Sbjct: 281 LPFLDKQAPSVKASGSCNTLVIR--QGEIEGHDTDGE-------------GLFSVLMQHQ 325
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL + + GAGGA +++A ++IF+
Sbjct: 326 IPLNNQRVAIIGAGGAAQSIATRLSRANCELLIFN 360
>gi|428772149|ref|YP_007163937.1| shikimate dehydrogenase [Cyanobacterium stanieri PCC 7202]
gi|428686428|gb|AFZ46288.1| shikimate dehydrogenase [Cyanobacterium stanieri PCC 7202]
Length = 286
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I TKV G+I P+ HS PI+ N +N + IYVP V D L+ + + D
Sbjct: 2 NITGKTKVLGIIGNPIEHSLSPIIQNRAIAFLNLDYIYVPFPVMGDSLQVALDGFRAIDV 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P+K+AVM F E+ AQ I AVNT+ + P G NTD + I ++
Sbjct: 62 QGFNVTIPHKQAVMPFLSEISDTAQLIGAVNTVWQTPEGWH--GTNTDIDGFIAPLKAL- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
R +++ T ++ G GGA RA+ G G R
Sbjct: 119 -NRDWEDVTP-----------IILGNGGASRAVVVGCAQLGCR 149
>gi|56963403|ref|YP_175134.1| shikimate 5-dehydrogenase [Bacillus clausii KSM-K16]
gi|81600933|sp|Q5WHI2.1|AROE_BACSK RecName: Full=Shikimate dehydrogenase
gi|56909646|dbj|BAD64173.1| shikimate 5-dehydrogenase [Bacillus clausii KSM-K16]
Length = 275
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
T+ FGLI P+GHSK P++H ++ + + +Y + +L T + GF+V
Sbjct: 2 TRQFGLIGHPLGHSKSPVMHEAAYKDMGLDAVYCAYDISPQELGNAIRTMKAQGIDGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K A++ + DE+ A+A+ AVNT++ DG+ +G NTD + I ++ + ++
Sbjct: 62 TIPHKVAIIDYLDEIDEDAEAMGAVNTVV--CQDGRWVGKNTDADGYIESLLPVVSDQS- 118
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRAL 383
L GR ++ GAGGA RA+
Sbjct: 119 ----------LTGRRVLVIGAGGAARAV 136
>gi|148642291|ref|YP_001272804.1| 3-dehydroquinate dehydratase [Methanobrevibacter smithii ATCC
35061]
gi|222444538|ref|ZP_03607053.1| hypothetical protein METSMIALI_00150 [Methanobrevibacter smithii
DSM 2375]
gi|261350923|ref|ZP_05976340.1| 3-dehydroquinate dehydratase, type I [Methanobrevibacter smithii
DSM 2374]
gi|170652857|sp|A5UJQ8.1|AROD_METS3 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|148551308|gb|ABQ86436.1| 3-dehydroquinate dehydratase [Methanobrevibacter smithii ATCC
35061]
gi|222434103|gb|EEE41268.1| 3-dehydroquinate dehydratase, type I [Methanobrevibacter smithii
DSM 2375]
gi|288860261|gb|EFC92559.1| 3-dehydroquinate dehydratase, type I [Methanobrevibacter smithii
DSM 2374]
Length = 224
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 9/217 (4%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG-KDLEIILTKKPLPVLI 69
T I P+ E V+ +GADV+E R+D ++N P D++ I+ + P++
Sbjct: 5 TKIAIPIFQAKKEDVIKVAEDCIEKGADVLEFRIDALDN--PNFDDIKEIIEEINFPIIA 62
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
R GG ++G E +R++ L L DYVD EL+ + KQ H +G IVS
Sbjct: 63 TNRISSEGGSFKGSEEERIDILLKCAPL-VDYVDIELQSDDRYI-KQI--HDTGVTTIVS 118
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 189
+ +TP ++ Y+V + Q G DI K+ F ND+ + +I +LSHC+ IA S+
Sbjct: 119 YHDFHKTPEINEIMYIVEKEQKLG-DIAKVAFMPNDLDDTLKILAILSHCE-NTIAISMS 176
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLR 226
+ G +++++ KF+ + + + + G +E+++
Sbjct: 177 DLGSYTRVMASKFDSPITFAAGRDVTAPGQIDIETMK 213
>gi|15669645|ref|NP_248458.1| 3-dehydroquinate dehydratase [Methanocaldococcus jannaschii DSM
2661]
gi|11386641|sp|Q58849.1|AROD_METJA RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|1592097|gb|AAB99464.1| 3-dehydroquinate dehydratase (aroD) [Methanocaldococcus jannaschii
DSM 2661]
Length = 220
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 8/222 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ SVE+ + + E AD+VE R+D + +D+E P +I
Sbjct: 1 MICLPVVEDSVEKAIKTA-EKYLEIADIVEFRIDMLKEVSE-EDIEKFA---KYPCIITV 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI-LGKQYSSHQSGTRFIVSC 130
R W GG ++G+ +RL + A + A +VD EL+ N L K S T+ I+S
Sbjct: 56 RADWEGGYWKGNNEERLNLIKKAIECNAKFVDIELREEKNKELVKFRDEIGSKTKIIISY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TPS+E L +V + + G DI K N ++ I ++++ II +GE
Sbjct: 116 HDFEKTPSKEKLVEIVEKALSIG-DIAKFATMANSKEDVLNILEVINKYPGKIIGIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKV 231
+G ++++L F L + S KG + G +++L++ +++
Sbjct: 175 KGKLTRILGVYFGSILTFASYKGKSSAPGQVDIDTLKEIWRL 216
>gi|72383151|ref|YP_292506.1| shikimate 5-dehydrogenase [Prochlorococcus marinus str. NATL2A]
gi|72003001|gb|AAZ58803.1| shikimate dehydrogenase [Prochlorococcus marinus str. NATL2A]
Length = 311
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSS 287
K+ I T + GL+ +PV HS PI+HN + + + YV M + DL+K
Sbjct: 16 KMSTITGKTNLVGLLGQPVNHSLSPIMHNAAYEEMGLDWCYVAMPCESQDLEKVTKALRF 75
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
DF G ++ P+K+ V+K C+++ ++ I AVNT+I + + IG NTD + +T ++
Sbjct: 76 LDFKGLNITIPHKQEVLKACNKLTEISNEIQAVNTLIPE-ENNQWIGANTDVQGFLTPLK 134
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
D L + V+ G GG+ RA+ G S + V
Sbjct: 135 D---------------HNLKNKNVVVIGCGGSARAVVMGLSSLNVKKV 167
>gi|153206964|ref|ZP_01945782.1| 3-dehydroquinate dehydratase, type I [Coxiella burnetii 'MSU Goat
Q177']
gi|212219569|ref|YP_002306356.1| 3-dehydroquinate dehydratase [Coxiella burnetii CbuK_Q154]
gi|229488089|sp|B6J6K1.1|AROD_COXB1 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|120577037|gb|EAX33661.1| 3-dehydroquinate dehydratase, type I [Coxiella burnetii 'MSU Goat
Q177']
gi|212013831|gb|ACJ21211.1| 3-dehydroquinate dehydratase [Coxiella burnetii CbuK_Q154]
Length = 233
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVL 68
NT IC ++ +++E+ LS + +A D VE+R+D + P + II +
Sbjct: 3 NTPRICVVVIGKTLEEFLSQL-EAAQTAVDFVELRIDYLEQINPNW-VRIIKNHTQKKAI 60
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIV 128
+ R + GG + G + E L DLG DY+D +L VA+ I S H+ + I+
Sbjct: 61 LCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKI-----SIHEKKAKIII 115
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL--SHCQVPIIAY 186
S + TP +L +L+ M+ D+ K ++ +F+LL +I
Sbjct: 116 SYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKKNNENMIVL 175
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKG 213
+GE+G + +LLSP G L + S+ G
Sbjct: 176 GMGEQGKIIRLLSPLLGGYLTFSSING 202
>gi|238917253|ref|YP_002930770.1| shikimate 5-dehydrogenase [Eubacterium eligens ATCC 27750]
gi|238872613|gb|ACR72323.1| shikimate 5-dehydrogenase [Eubacterium eligens ATCC 27750]
Length = 290
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 81/164 (49%), Gaps = 17/164 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I T+V GLI PVGHS P +HN R + +Y V+ D++ S +
Sbjct: 3 IKGTTRVCGLIGNPVGHSVSPAIHNNLARLTGKDMVYTTFKVEKGDVEAAVRGAYSLNIL 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K V+ ++ PLA+AI AVNT++R +DG GYNTD +ED
Sbjct: 63 GLNVTVPHKSEVIDSLVDIDPLAKAIGAVNTLVR--ADGGFKGYNTDILGLARELEDE-- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G LA ++ GAGGA RA+ F S+GA+ +
Sbjct: 119 -----------GIELADSKVIILGAGGAARAITFLCSSKGAKKI 151
>gi|255348736|ref|ZP_05380743.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis 70]
gi|255503276|ref|ZP_05381666.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis 70s]
Length = 478
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 166/395 (42%), Gaps = 45/395 (11%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T I P ++ +Q+L ++ + V + + C+ +L+ ++ P+ +L
Sbjct: 4 TTISGPSFLEAKKQILRSLKECHCFEMRVDLLSVSCL-------ELKKLMELAPISILAW 56
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+P+ + D ++++L +L +Y+D E + + H + I S
Sbjct: 57 KKPESCS---QADWIDKMQSL---AELNPNYLDLEKDFPEEDMIRIRQLHPQ-IKIIRSL 109
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ T D+ L + M+++ AD K S + T++ I +G
Sbjct: 110 H----TSEHTDIIQLYAHMRSSAADYYKFAVSSSSTTDLLDICHQKRSLPENTTVVCLGG 165
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTY--KVEHINADTKVFGLI---S 245
G S++LSP Y G+ + P SL+ Y ++A + + LI S
Sbjct: 166 MGRPSRILSPILQNPFTYARSTGSSPVA-PGQFSLKHHYFYNFASLSAQSPICALIGDTS 224
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
+ +GH + HNP F + Y+ P+ +L KFFST + F G SV P K AV
Sbjct: 225 RSIGH----LTHNPFFSQLGVACPYIKLPLTPQELPKFFSTIRTQPFLGVSVTSPLKTAV 280
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ F D+ P +A + NT++ R G++ G++TD E G +
Sbjct: 281 LPFLDKQAPSVKASGSCNTLVIR--QGEIEGHDTDGE-------------GLFSVLMQHQ 325
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL + + GAGGA +++A ++IF+
Sbjct: 326 IPLNNQRVAIIGAGGAAQSIATRLSRANCELLIFN 360
>gi|385243577|ref|YP_005811423.1| shikimate 5-dehydrogenase [Chlamydia trachomatis D-EC]
gi|385244457|ref|YP_005812301.1| shikimate 5-dehydrogenase [Chlamydia trachomatis D-LC]
gi|297748500|gb|ADI51046.1| Shikimate 5-dehydrogenase [Chlamydia trachomatis D-EC]
gi|297749380|gb|ADI52058.1| Shikimate 5-dehydrogenase [Chlamydia trachomatis D-LC]
Length = 500
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 166/395 (42%), Gaps = 45/395 (11%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T I P ++ +Q+L ++ + V + + C+ +L+ ++ P+ +L
Sbjct: 26 TTISGPSFLEAKKQILRSLKECHCFEMRVDLLSVSCL-------ELKKLMELAPISILAW 78
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+P+ + D ++++L +L +Y+D E + + H + I S
Sbjct: 79 KKPE---SCSQADWIDKMQSL---AELNPNYLDLEKDFPEEDMIRIRQLHPQ-IKIIRSL 131
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ T D+ L + M+++ AD K S + T++ I +G
Sbjct: 132 H----TSEHTDIIQLYAHMRSSAADYYKFAVSSSSTTDLLDICHQKRSLPENTTVVCLGG 187
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTY--KVEHINADTKVFGLI---S 245
G S++LSP Y G+ + P SL+ Y ++A + + LI S
Sbjct: 188 MGRPSRILSPILQNPFTYARSTGSSPVA-PGQFSLKHHYFYNFASLSAQSPICALIGDTS 246
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
+ +GH + HNP F + Y+ P+ +L KFFST + F G SV P K AV
Sbjct: 247 RSIGH----LTHNPFFSQLGVACPYIKLPLTPQELPKFFSTIRTQPFLGVSVTSPLKTAV 302
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ F D+ P +A + NT++ R G++ G++TD E + +
Sbjct: 303 LPFLDKQAPSVKASGSCNTLVIR--QGEIEGHDTDGEGLFSVL-------------MQHQ 347
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL + + GAGGA +++A ++IF+
Sbjct: 348 IPLNNQRVAIIGAGGAAQSIATRLSRANCELLIFN 382
>gi|15605094|ref|NP_219879.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis D/UW-3/CX]
gi|255311177|ref|ZP_05353747.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis 6276]
gi|255317478|ref|ZP_05358724.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis 6276s]
gi|255506954|ref|ZP_05382593.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis D(s)2923]
gi|385239886|ref|YP_005807728.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis G/9768]
gi|385240809|ref|YP_005808650.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis G/11222]
gi|385242662|ref|YP_005810501.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis G/9301]
gi|385246272|ref|YP_005815094.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis G/11074]
gi|389858062|ref|YP_006360304.1| shikimate 5-dehydrogenase [Chlamydia trachomatis F/SW4]
gi|389859814|ref|YP_006362054.1| shikimate 5-dehydrogenase [Chlamydia trachomatis F/SW5]
gi|9087121|sp|O84375.1|ARODE_CHLTR RecName: Full=Shikimate biosynthesis protein AroDE; Includes:
RecName: Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; AltName: Full=Type I DHQase;
Includes: RecName: Full=Shikimate dehydrogenase
gi|3328794|gb|AAC67966.1| Shikimate 5-Dehyrogenase [Chlamydia trachomatis D/UW-3/CX]
gi|296435891|gb|ADH18065.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis G/9768]
gi|296436817|gb|ADH18987.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis G/11222]
gi|296437751|gb|ADH19912.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis G/11074]
gi|297140250|gb|ADH97008.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis G/9301]
gi|380249134|emb|CCE14426.1| shikimate 5-dehydrogenase [Chlamydia trachomatis F/SW5]
gi|380250009|emb|CCE13537.1| shikimate 5-dehydrogenase [Chlamydia trachomatis F/SW4]
gi|440527073|emb|CCP52557.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis D/SotonD1]
gi|440528855|emb|CCP54339.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis D/SotonD6]
gi|440531537|emb|CCP57047.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis F/SotonF3]
gi|440532429|emb|CCP57939.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis G/SotonG1]
gi|440533322|emb|CCP58832.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis Ia/SotonIa1]
gi|440534216|emb|CCP59726.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis Ia/SotonIa3]
Length = 478
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 166/395 (42%), Gaps = 45/395 (11%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T I P ++ +Q+L ++ + V + + C+ +L+ ++ P+ +L
Sbjct: 4 TTISGPSFLEAKKQILRSLKECHCFEMRVDLLSVSCL-------ELKKLMELAPISILAW 56
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+P+ + D ++++L +L +Y+D E + + H + I S
Sbjct: 57 KKPESCS---QADWIDKMQSL---AELNPNYLDLEKDFPEEDMIRIRQLHPQ-IKIIRSL 109
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ T D+ L + M+++ AD K S + T++ I +G
Sbjct: 110 H----TSEHTDIIQLYAHMRSSAADYYKFAVSSSSTTDLLDICHQKRSLPENTTVVCLGG 165
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTY--KVEHINADTKVFGLI---S 245
G S++LSP Y G+ + P SL+ Y ++A + + LI S
Sbjct: 166 MGRPSRILSPILQNPFTYARSTGSSPVA-PGQFSLKHHYFYNFASLSAQSPICALIGDTS 224
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
+ +GH + HNP F + Y+ P+ +L KFFST + F G SV P K AV
Sbjct: 225 RSIGH----LTHNPFFSQLGVACPYIKLPLTPQELPKFFSTIRTQPFLGVSVTSPLKTAV 280
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ F D+ P +A + NT++ R G++ G++TD E G +
Sbjct: 281 LPFLDKQAPSVKASGSCNTLVIR--QGEIEGHDTDGE-------------GLFSVLMQHQ 325
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL + + GAGGA +++A ++IF+
Sbjct: 326 IPLNNQRVAIIGAGGAAQSIATRLSRANCELLIFN 360
>gi|166154581|ref|YP_001654699.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis 434/Bu]
gi|166155456|ref|YP_001653711.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|301335847|ref|ZP_07224091.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2tet1]
gi|339626041|ref|YP_004717520.1| shikimate 5-dehydrogenase [Chlamydia trachomatis L2c]
gi|165930569|emb|CAP04065.1| shikimate 5-dehydrogenase [Chlamydia trachomatis 434/Bu]
gi|165931444|emb|CAP07019.1| shikimate 5-dehydrogenase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339460459|gb|AEJ76962.1| shikimate 5-dehydrogenase [Chlamydia trachomatis L2c]
gi|440526175|emb|CCP51659.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/8200/07]
gi|440536000|emb|CCP61513.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/795]
gi|440536892|emb|CCP62406.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L1/440/LN]
gi|440537782|emb|CCP63296.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L1/1322/p2]
gi|440538672|emb|CCP64186.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L1/115]
gi|440539561|emb|CCP65075.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L1/224]
gi|440540452|emb|CCP65966.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2/25667R]
gi|440541341|emb|CCP66855.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L3/404/LN]
gi|440542228|emb|CCP67742.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/UCH-2]
gi|440543119|emb|CCP68633.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/Canada2]
gi|440544010|emb|CCP69524.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/LST]
gi|440544900|emb|CCP70414.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/Ams1]
gi|440545790|emb|CCP71304.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/CV204]
gi|440914052|emb|CCP90469.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/Ams2]
gi|440914942|emb|CCP91359.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/Ams3]
gi|440915834|emb|CCP92251.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/Canada1]
gi|440916728|emb|CCP93145.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/Ams4]
gi|440917618|emb|CCP94035.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis L2b/Ams5]
Length = 480
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 166/395 (42%), Gaps = 45/395 (11%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T I P ++ +Q+L ++ + V + + C+ +L+ ++ P+ +L
Sbjct: 4 TTISGPSFLEAKKQILRSLKECHCFEMRVDLLSVSCL-------ELKKLMELAPISILAW 56
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+P+ + D ++++L +L +Y+D E + + H + I S
Sbjct: 57 KKPESCS---QADWIDKMQSL---AELNPNYLDLEKDFPEEDMIRIRQLHPQ-IKIIRSL 109
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ T D+ L + M+++ AD K S + T++ I +G
Sbjct: 110 H----TSEHTDIIQLYAHMRSSAADYYKFAVSSSSTTDLLDICHQKRSLPENTTVVCLGG 165
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTY--KVEHINADTKVFGLI---S 245
G S++LSP Y G+ + P SL+ Y ++A + + LI S
Sbjct: 166 MGRPSRILSPILQNPFTYARSTGSSPVA-PGQFSLKHHYFYNFASLSAQSPICALIGDTS 224
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
+ +GH + HNP F + Y+ P+ +L KFFST + F G SV P K AV
Sbjct: 225 RSIGH----LTHNPFFSQLGVACPYIKLPLTPQELPKFFSTIRTQPFLGVSVTSPLKTAV 280
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ F D+ P +A + NT++ R G++ G++TD E G +
Sbjct: 281 LPFLDKQAPSVKASGSCNTLVIR--QGEIEGHDTDGE-------------GLFSVLMQHQ 325
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL + + GAGGA +++A ++IF+
Sbjct: 326 IPLNNQRVAIIGAGGAAQSIATRLSRANCELLIFN 360
>gi|385241742|ref|YP_005809582.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis E/11023]
gi|385245349|ref|YP_005814172.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis E/150]
gi|386262723|ref|YP_005816002.1| shikimate 5-dehydrogenase [Chlamydia trachomatis Sweden2]
gi|389858938|ref|YP_006361179.1| shikimate 5-dehydrogenase [Chlamydia trachomatis E/SW3]
gi|289525411|emb|CBJ14888.1| shikimate 5-dehydrogenase [Chlamydia trachomatis Sweden2]
gi|296434965|gb|ADH17143.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis E/150]
gi|296438685|gb|ADH20838.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis E/11023]
gi|380250887|emb|CCE12648.1| shikimate 5-dehydrogenase [Chlamydia trachomatis E/SW3]
gi|440529747|emb|CCP55231.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis E/SotonE4]
gi|440530646|emb|CCP56130.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis E/SotonE8]
gi|440535114|emb|CCP60624.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis E/Bour]
Length = 478
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 166/395 (42%), Gaps = 45/395 (11%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T I P ++ +Q+L ++ + V + + C+ +L+ ++ P+ +L
Sbjct: 4 TTISGPSFLEAKKQILRSLKECHCFEMRVDLLSVSCL-------ELKKLMELAPISILAW 56
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+P+ + D ++++L +L +Y+D E + + H + I S
Sbjct: 57 KKPESCS---QADWIDKMQSL---AELNPNYLDLEKDFPEEDMIRIRQLHPQ-IKIIRSL 109
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ T D+ L + M+++ AD K S + T++ I +G
Sbjct: 110 H----TSEHTDIIQLYAHMRSSAADYYKFAVSSSSTTDLLDICHQKRSLPENTTVVCLGG 165
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTY--KVEHINADTKVFGLI---S 245
G S++LSP Y G+ + P SL+ Y ++A + + LI S
Sbjct: 166 MGRPSRILSPILQNPFTYARSTGSSPVA-PGQFSLKHHYFYNFASLSAQSPICALIGDTS 224
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
+ +GH + HNP F + Y+ P+ +L KFFST + F G SV P K AV
Sbjct: 225 RSIGH----LTHNPFFSQLGVACPYIKLPLTPQELPKFFSTIRTQPFLGVSVTSPLKTAV 280
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ F D+ P +A + NT++ R G++ G++TD E G +
Sbjct: 281 LPFLDKQAPSVKASGSCNTLVIR--QGEIEGHDTDGE-------------GLFSVLMQHQ 325
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL + + GAGGA +++A ++IF+
Sbjct: 326 IPLNNQRVAIIGAGGAAQSIATRLSRANCELLIFN 360
>gi|428775357|ref|YP_007167144.1| shikimate dehydrogenase [Halothece sp. PCC 7418]
gi|428689636|gb|AFZ42930.1| shikimate dehydrogenase [Halothece sp. PCC 7418]
Length = 283
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 17/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN H+ + +Y+P+ V DL++ + +++ D
Sbjct: 2 ITGKTKLLGVIGDPVEHSLSPVMHNAVLNHLGLDYVYLPLPVKKGDLERALAGFTAIDLV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+ P+K+A++ + + + P AQ + AVNT+ R ++ G NTD + I ++
Sbjct: 62 GFNATIPHKQAIIPYLNRITPEAQQVGAVNTVWR--TEAGWEGTNTDVDGFIAPLKSL-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ + N T V+ G GGA RA+ G G
Sbjct: 118 DQDWSNITP-----------VILGNGGAARAVIVGCAKLG 146
>gi|334116684|ref|ZP_08490776.1| Shikimate dehydrogenase [Microcoleus vaginatus FGP-2]
gi|333461504|gb|EGK90109.1| Shikimate dehydrogenase [Microcoleus vaginatus FGP-2]
Length = 325
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 27/183 (14%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P +HN H+ + +Y+P V DLK + +++
Sbjct: 2 IKGTTKLLGVIGHPVEHSLSPAMHNAAISHLGVDFVYLPFPVKPGDLKAALAGFAAIGVR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE---- 347
GFS+ P+K+A++ EV P+A+AI AVNT+ SD G NTD E + ++
Sbjct: 62 GFSITIPHKQAILPLLSEVSPIARAIGAVNTVYL--SDKGWCGTNTDVEGFLAPLQTPPT 119
Query: 348 --------DAIK--ERGYK---------NGTASFGSPLAGRMFVLAGAGGAGRALAFGAK 388
DA ERG G A GS + ++ V+ G GGA RA+ G
Sbjct: 120 PPYQGGAKDATSPLERGNTAVESCPPPYQGGARGGSDWSQKVAVILGNGGAARAVVAGCA 179
Query: 389 SRG 391
G
Sbjct: 180 QLG 182
>gi|194476868|ref|YP_002049047.1| shikimate / quinate 5-dehydrogenase [Paulinella chromatophora]
gi|171191875|gb|ACB42837.1| shikimate / quinate 5-dehydrogenase [Paulinella chromatophora]
Length = 304
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSV 295
T + G++ PV HS PI+HN + + N +Y+P+ +++ L+ S+ D GF++
Sbjct: 7 TALVGILGNPVSHSLSPIMHNAALKSLGLNWLYIPLPINNTSLEILVQNLSNIDCRGFNI 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRP-SDGKLIGYNTDCEASITAIEDAIKERG 354
P+KE + + E+ P+A+ + AVNT IR P ++ +G NTD E G
Sbjct: 67 TIPHKEIIAQLATELTPIAKRVGAVNTFIREPNTNNGWLGTNTDVE-------------G 113
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA---RVVIFDI 399
+ N + L+ + V+ G GG+ RA+ G RV+ DI
Sbjct: 114 FINSLKNNHINLSQKRAVILGCGGSARAILVALVELGVASIRVIGRDI 161
>gi|365766615|gb|EHN08111.1| Aro1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1588
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 166/381 (43%), Gaps = 47/381 (12%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTYSS-----------PDFAGFSVGFPYKEAVMKFCDEVHPLA 314
Y + +P D F T S+ +F G +V P K +M++ DE+ A
Sbjct: 1329 YEILGLPHKFDK----FETXSAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAA 1384
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
+ I AVNT+I + K G NTD I +A+ NG + AG ++
Sbjct: 1385 KVIGAVNTVIPL-GNKKFKGDNTDW----LGIRNAL----INNGVPEYVGHTAG---LVI 1432
Query: 375 GAGGAGRALAFGAKSRGARVV 395
GAGG RA + S G + +
Sbjct: 1433 GAGGTSRAALYALHSLGCKKI 1453
>gi|322372563|ref|ZP_08047099.1| shikimate dehydrogenase [Streptococcus sp. C150]
gi|321277605|gb|EFX54674.1| shikimate dehydrogenase [Streptococcus sp. C150]
Length = 285
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+Y+ + DL + D
Sbjct: 2 QIDGYTRLAAVVANPIKHSISPFIHNLAFEKTQVNGVYLAWEIPESDLAETVENIRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+ V+ F DE+ P AQ I AVNT++ R DG LIG+NTD ++++
Sbjct: 62 FGINLSMPYKQKVISFLDELSPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKNF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
SP + +L GAGGA +A+ A GA+ V
Sbjct: 119 -------------SPKGAHLMIL-GAGGAAKAIVTQAVLDGAKKV 149
>gi|345017564|ref|YP_004819917.1| shikimate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032907|gb|AEM78633.1| Shikimate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 292
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA+TK++GLI PV HS P++HN F+ +N N +Y V + L++ +
Sbjct: 11 INANTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEEAVKGVKALGIR 70
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++K+ D V A I AVNT++ G L GYNTD
Sbjct: 71 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDV------------ 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ + G + GR V+ GAGGA +A+ +G +I
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSII 160
>gi|89100813|ref|ZP_01173665.1| shikimate 5-dehydrogenase [Bacillus sp. NRRL B-14911]
gi|89084459|gb|EAR63608.1| shikimate 5-dehydrogenase [Bacillus sp. NRRL B-14911]
Length = 279
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+F +I P+GHS P +HN F + YVP+ V +DL + AGF+V
Sbjct: 3 KLFAVIGDPIGHSMSPAMHNDLFGIYGLDACYVPLKVRREDLGDAVKGLRAIGVAGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
P+K +M F DE+ LA+AI AVNT++ + DGKLIGYNTD E + + + +
Sbjct: 63 VPHKTEIMPFLDEIDQLAEAIGAVNTVLNK--DGKLIGYNTDGEGYVRGLASEVPD 116
>gi|29655353|ref|NP_821045.1| 3-dehydroquinate dehydratase [Coxiella burnetii RSA 493]
gi|154707658|ref|YP_001425473.1| 3-dehydroquinate dehydratase [Coxiella burnetii Dugway 5J108-111]
gi|161831551|ref|YP_001595910.1| 3-dehydroquinate dehydratase [Coxiella burnetii RSA 331]
gi|165918230|ref|ZP_02218316.1| 3-dehydroquinate dehydratase, type I [Coxiella burnetii Q321]
gi|212213518|ref|YP_002304454.1| 3-dehydroquinate dehydratase [Coxiella burnetii CbuG_Q212]
gi|81628285|sp|Q83A36.1|AROD_COXBU RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|189046296|sp|A9KDC5.1|AROD_COXBN RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|189046297|sp|A9N909.1|AROD_COXBR RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|229488090|sp|B6J3T7.1|AROD_COXB2 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|29542625|gb|AAO91559.1| 3-dehydroquinate dehydratase [Coxiella burnetii RSA 493]
gi|154356944|gb|ABS78406.1| 3-dehydroquinate dehydratase [Coxiella burnetii Dugway 5J108-111]
gi|161763418|gb|ABX79060.1| 3-dehydroquinate dehydratase, type I [Coxiella burnetii RSA 331]
gi|165918090|gb|EDR36694.1| 3-dehydroquinate dehydratase, type I [Coxiella burnetii Q321]
gi|212011928|gb|ACJ19309.1| 3-dehydroquinate dehydratase [Coxiella burnetii CbuG_Q212]
Length = 233
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVL 68
NT IC ++ +++E+ LS + +A D VE+R+D + P + II +
Sbjct: 3 NTPRICVVVIGKTLEEFLSQL-EAAQTAVDFVELRIDYLEQINPNW-VRIIKNHTHKKAI 60
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIV 128
+ R + GG + G + E L DLG DY+D +L VA+ I S H+ + I+
Sbjct: 61 LCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKI-----SIHEKKAKIII 115
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL--SHCQVPIIAY 186
S + TP +L +L+ M+ D+ K ++ +F+LL +I
Sbjct: 116 SYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKKNNENMIVL 175
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKG 213
+GE+G + +LLSP G L + S+ G
Sbjct: 176 GMGEQGKIIRLLSPLLGGYLTFSSING 202
>gi|392576505|gb|EIW69636.1| hypothetical protein TREMEDRAFT_44120 [Tremella mesenterica DSM 1558]
Length = 1595
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 169/398 (42%), Gaps = 59/398 (14%)
Query: 35 EGADVVEIRLDCINNFQP-------------GKDLEIILTKKPLPVLIVYRPKWAGGLYE 81
EGAD +E+R D +N G+ L ++ LP++ R K GG +
Sbjct: 1094 EGADAIELRADLLNPTGQVVNAPSIPSLEYVGRQLSLLRLVTNLPIVYSVRSKEQGGFFP 1153
Query: 82 GDEHKRLE-ALHLAEDLGADYVDFELK----VASNILGKQYSSHQSGTRFIVSCNLDCET 136
D+ E + L +YVD E+ V +I+ + SH + S ++ +
Sbjct: 1154 SDQPDAYEETVILGLRSACEYVDMEVAWPVPVMDSIVSHRGQSHIIASWHDWSGSMKWSS 1213
Query: 137 PSEEDLGYLVSRMQATGADIIKLVFSV---NDITEIARIFQLLSHCQVPIIAYSVGERGL 193
E Y+ A DI+K+V + +D +++ LS P++A ++GE G
Sbjct: 1214 -HEVRNKYIEC---AKYGDIVKIVGTAKTSSDNSQLQLFVSSLSPNSKPLLAINMGELGQ 1269
Query: 194 VSQL----LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFGLISKP 247
+S++ L+P + L P P S+++ H+ +K F + P
Sbjct: 1270 LSRITNLILTPITHPLL--------PSRAAPGQLSVKEILLARHLIGMLPSKKFYIAGSP 1321
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
+ HS P LHN F+ Y +Y + +DD +F S + G S+ P K +M
Sbjct: 1322 ISHSMSPTLHNAAFKACGYPHVYTRLEAATIDD--EFLEILHSDETGGMSITMPLKLLIM 1379
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGK--LIGYNTDCEASITAIEDAIKERGYKN-GTAS 361
D V P A+ + AVNT+I +GK L G NTD + AI E N ++S
Sbjct: 1380 DHLDSVSPDARLLGAVNTVIPSIRNGKRWLHGENTDWQ--------AIYEAASTNLPSSS 1431
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFD 398
L G ++ GAGG RA S+ R+ +++
Sbjct: 1432 SKQTLEG---LVIGAGGTCRAALMALHTSKAKRIYLYN 1466
>gi|443895669|dbj|GAC73014.1| pentafunctional AROM protein [Pseudozyma antarctica T-34]
Length = 1720
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 172/396 (43%), Gaps = 42/396 (10%)
Query: 29 MYQAKAEGADVVEIRLDCIN-NFQP------------GKDLEIILTKKPLPVLIVYRPKW 75
+ ++ GAD +E R D +N + +P L + + LP++ R
Sbjct: 1183 LIRSMESGADALEFRADLLNASGEPVTSPQLPDVEYVKSQLAALRHRTSLPIVFTVRTHS 1242
Query: 76 AGGLY-EGDEHKRLEALHLAEDLGADYVDFEL----KVASNILGKQYSSHQSGTRFIVSC 130
GG++ +G + + E + +A +YVD EL + ++ + SS G+ S
Sbjct: 1243 QGGMFPDGYQKEYFELISVALRHCCEYVDLELGWDDDALAAVVAAKGSSQIIGSFHDWSG 1302
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-PIIAYSVG 189
LD E+ + + R A II S++D + R +S P++A ++G
Sbjct: 1303 KLDWESDATAKIYERACRFGDI-AKIIGKANSMDDNYSLERFRTKVSASATKPLLAVNMG 1361
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT--KVFGLISKP 247
G S++++P F + + P P S R+ + T + F L P
Sbjct: 1362 AAGQFSRIVNPVFTPI----THEAMPFKAAPGQLSFREVQNALTLIGKTEPQQFALFGNP 1417
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPYKEAVMKF 306
+GHS P+LHN F + Y + ++ + + +P+F G SV P+K A+++
Sbjct: 1418 IGHSLSPLLHNTGFAALGLPHHYQLLQTREVGETLDAFVHAPNFGGASVTIPHKIAIIRL 1477
Query: 307 CDEVHPLAQAIAAVNTIIR-RPSDGK---LIGYNTDCEASITAIEDAIKERGYKNGTASF 362
D V A+AI AVNT+I R + G L+G NTD A T +++ T
Sbjct: 1478 LDRVTDEAKAIGAVNTVIPVRDAMGNVTSLVGDNTDWIAIETLARRSLR-------TVHL 1530
Query: 363 GSP-LAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
+P L G ++ GAGG+ RA F G + ++
Sbjct: 1531 ANPKLTG---LVIGAGGSARAAIFALYRLGVKRILL 1563
>gi|327507679|sp|C8Z543.1|ARO1_YEAS8 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|259145368|emb|CAY78632.1| Aro1p [Saccharomyces cerevisiae EC1118]
Length = 1588
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 166/381 (43%), Gaps = 47/381 (12%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTYSS-----------PDFAGFSVGFPYKEAVMKFCDEVHPLA 314
Y + +P D F T S+ +F G +V P K +M++ DE+ A
Sbjct: 1329 YEILGLPHKFDK----FETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAA 1384
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
+ I AVNT+I + K G NTD I +A+ NG + AG ++
Sbjct: 1385 KVIGAVNTVIPL-GNKKFKGDNTDW----LGIRNAL----INNGVPEYVGHTAG---LVI 1432
Query: 375 GAGGAGRALAFGAKSRGARVV 395
GAGG RA + S G + +
Sbjct: 1433 GAGGTSRAALYALHSLGCKKI 1453
>gi|145577939|gb|ABP82688.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
Length = 238
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A+ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALRSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L GAGGA RA+ F G +
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVK 131
>gi|6320332|ref|NP_010412.1| pentafunctional protein ARO1p [Saccharomyces cerevisiae S288c]
gi|114166|sp|P08566.1|ARO1_YEAST RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|3381|emb|CAA29458.1| unnamed protein product [Saccharomyces cerevisiae]
gi|665659|emb|CAA88208.1| Aro1p [Saccharomyces cerevisiae]
gi|285811149|tpg|DAA11973.1| TPA: pentafunctional protein ARO1p [Saccharomyces cerevisiae S288c]
Length = 1588
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 166/381 (43%), Gaps = 47/381 (12%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTYSS-----------PDFAGFSVGFPYKEAVMKFCDEVHPLA 314
Y + +P D F T S+ +F G +V P K +M++ DE+ A
Sbjct: 1329 YEILGLPHKFDK----FETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAA 1384
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
+ I AVNT+I + K G NTD I +A+ NG + AG ++
Sbjct: 1385 KVIGAVNTVIPL-GNKKFKGDNTDW----LGIRNAL----INNGVPEYVGHTAG---LVI 1432
Query: 375 GAGGAGRALAFGAKSRGARVV 395
GAGG RA + S G + +
Sbjct: 1433 GAGGTSRAALYALHSLGCKKI 1453
>gi|220931440|ref|YP_002508348.1| shikimate 5-dehydrogenase [Halothermothrix orenii H 168]
gi|254806746|sp|B8D2C6.1|AROE_HALOH RecName: Full=Shikimate dehydrogenase
gi|219992750|gb|ACL69353.1| shikimate 5-dehydrogenase [Halothermothrix orenii H 168]
Length = 289
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 16/157 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
T+V GL+ P+GHS P +HN ++ + N +Y+P+ + D LK+ + +F G +V
Sbjct: 6 TQVVGLMGYPLGHSMSPAMHNRAYKDLGINYVYLPLEIKPDFLKEGIEGLRAFNFRGVNV 65
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ LA I AVNTI+ + GKL GYNTD +ED
Sbjct: 66 TIPYKEKVIPYLDEIDRLAGEIGAVNTIVN--NGGKLKGYNTDALGFKKMLED------- 116
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
SF + G V+ GAGGA RA+ GA
Sbjct: 117 ---DCSF--EIKGTKAVIIGAGGASRAVGAVLAREGA 148
>gi|323334224|gb|EGA75607.1| Aro1p [Saccharomyces cerevisiae AWRI796]
Length = 1588
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 166/381 (43%), Gaps = 47/381 (12%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTYSS-----------PDFAGFSVGFPYKEAVMKFCDEVHPLA 314
Y + +P D F T S+ +F G +V P K +M++ DE+ A
Sbjct: 1329 YEILGLPHKFDK----FETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAA 1384
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
+ I AVNT+I + K G NTD I +A+ NG + AG ++
Sbjct: 1385 KVIGAVNTVIPL-GNKKFKGDNTDW----LGIRNAL----INNGVPEYVGHTAG---LVI 1432
Query: 375 GAGGAGRALAFGAKSRGARVV 395
GAGG RA + S G + +
Sbjct: 1433 GAGGTSRAALYALHSLGCKKI 1453
>gi|322391590|ref|ZP_08065059.1| shikimate dehydrogenase [Streptococcus peroris ATCC 700780]
gi|321145673|gb|EFX41065.1| shikimate dehydrogenase [Streptococcus peroris ATCC 700780]
Length = 284
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ V+ DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVEATDLAETVANIRRYQMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+G+ SF ++G+ VL GAGGA +A+
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAI 137
>gi|332708016|ref|ZP_08428014.1| shikimate dehydrogenase [Moorea producens 3L]
gi|332353241|gb|EGJ32783.1| shikimate dehydrogenase [Moorea producens 3L]
Length = 291
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
I TK+ G+I PV HS P++HN + + +Y+P+ V DLK + + +
Sbjct: 3 QITGTTKLLGVIGDPVEHSLSPLMHNQAIASLGVDYVYLPLPVKSADLKNAIAGFEAIGL 62
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GFS+ P+K+ ++ E+ +AQ + AVNT+ R +D IG NTD E IT ++
Sbjct: 63 VGFSITIPHKQTIIPLLSEISTVAQGVGAVNTVYR--NDHGWIGTNTDIEGFITPLQG-- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+R + T V+ G GGA RA+ G G
Sbjct: 119 YDRDWTQTT-----------VVILGCGGAARAVVVGCAELG 148
>gi|444353153|ref|YP_007389297.1| 3-dehydroquinate dehydratase I (EC 4.2.1.10) [Enterobacter
aerogenes EA1509E]
gi|443903983|emb|CCG31757.1| 3-dehydroquinate dehydratase I (EC 4.2.1.10) [Enterobacter
aerogenes EA1509E]
Length = 251
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL---- 56
V NIT + T+IC PL+ ++++++L+N GAD++E R+D + + +
Sbjct: 7 VKNITFKEGETLICVPLIGKTLDELLTNAQGLVDAGADIIEWRVDHFTHVREIPQVLAAL 66
Query: 57 -EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
EI T K LP+L +R K GG E + E A G D +D EL + I
Sbjct: 67 AEIRHTLKALPLLFTFRSKKEGGETEISDEAYFELNRQAALSGLVDVIDIELFNDEAQIR 126
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV---FSVNDITEI- 169
+HQ+G + I+S + +TP++ED+ Y + RMQ GAD+ K+ + D+ +
Sbjct: 127 ALVNDAHQAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPLTPQDVLTLL 186
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 187 SATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQRAIAKLREL 246
Query: 229 YKV 231
+
Sbjct: 247 MDI 249
>gi|385260745|ref|ZP_10038888.1| shikimate dehydrogenase [Streptococcus sp. SK140]
gi|385190988|gb|EIF38416.1| shikimate dehydrogenase [Streptococcus sp. SK140]
Length = 285
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ V+ DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNQAFEATNTNGVYLAWEVEGTDLAETAANIRRYQMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+G+ SF ++G+ VL GAGGA +A+
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAI 137
>gi|309800674|ref|ZP_07694816.1| shikimate dehydrogenase [Streptococcus infantis SK1302]
gi|308115697|gb|EFO53231.1| shikimate dehydrogenase [Streptococcus infantis SK1302]
Length = 164
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ V+ DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNQAFEATNTNGVYLAWEVEATDLAETVANIRRYQMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+G+ SF ++G+ VL GAGGA +A+
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAI 137
>gi|335029401|ref|ZP_08522908.1| shikimate dehydrogenase [Streptococcus infantis SK1076]
gi|334268698|gb|EGL87130.1| shikimate dehydrogenase [Streptococcus infantis SK1076]
Length = 284
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ V+ DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNRAFEATNTNGVYLAWEVEGTDLAETVANIRRYQMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+G+ SF ++G+ VL GAGGA +A+
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAI 137
>gi|433444334|ref|ZP_20409253.1| shikimate dehydrogenase [Anoxybacillus flavithermus TNO-09.006]
gi|432001626|gb|ELK22499.1| shikimate dehydrogenase [Anoxybacillus flavithermus TNO-09.006]
Length = 276
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 16/149 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
K+FGLI PV HS P++HN F+ ++ + Y V+ LK+ + AGF+V
Sbjct: 3 KLFGLIGCPVHHSLSPLMHNDAFQSLHIDAHYHAFHVEPHMLKEAVQGLKALQCAGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AVM++ DE+ A+ + AVNT++ +GK +GYNTD E + A+ + +
Sbjct: 63 IPHKTAVMEYMDELDETAKQMGAVNTVVNE--NGKWVGYNTDGEGFVRALCEQMN----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAF 385
L+G ++ GAGGA R + F
Sbjct: 116 -------IELSGARILIIGAGGAARGIYF 137
>gi|312143784|ref|YP_003995230.1| shikimate 5-dehydrogenase [Halanaerobium hydrogeniformans]
gi|311904435|gb|ADQ14876.1| shikimate 5-dehydrogenase [Halanaerobium hydrogeniformans]
Length = 297
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 18/152 (11%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFA 291
N +TK++GL+ K + HS P LHN FR ++ N IY+ + + L+ + + + +F
Sbjct: 7 NNETKLYGLLGKTLSHSISPSLHNTGFRDLDINAIYLMLECKEKELLEDYIQSLKNLNFG 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G++V PYKE ++ + + LA+ AVNT++ R G+L GYNTD IE+A
Sbjct: 67 GWNVTIPYKEDIIPYLNGFSSLARDAGAVNTVLNR--RGRLTGYNTDVIGFQRQIEEA-- 122
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
G + + V+ GAGGA RA+
Sbjct: 123 -----------GFVVKDKKAVVIGAGGAARAV 143
>gi|387929812|ref|ZP_10132489.1| shikimate 5-dehydrogenase [Bacillus methanolicus PB1]
gi|387586630|gb|EIJ78954.1| shikimate 5-dehydrogenase [Bacillus methanolicus PB1]
Length = 277
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+ HS P++HN F+ + Y P V DL+ + + +GF+V
Sbjct: 3 KLYGVIGDPISHSMSPVMHNDLFKVYGIDAHYHPFHVKRGDLEAAVQGLKAINCSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +M F D++ PLA+AI AVNT++ + G+LIG+NTD RG+
Sbjct: 63 VPHKTEIMNFLDDIDPLAEAIGAVNTVVNK--GGRLIGFNTDG-------------RGFL 107
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
G + L ++ GAGGA +A+ + G + + F
Sbjct: 108 EGLKRNFAVLDSTRVLIIGAGGAAKAIYYTMAHAGVKHIDF 148
>gi|440525288|emb|CCP50539.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydia trachomatis K/SotonK1]
Length = 478
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 166/395 (42%), Gaps = 45/395 (11%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T I P ++ +Q+L ++ + V + + C+ +L+ ++ P+ +L
Sbjct: 4 TTISGPSFLEAKKQILRSLKECHCFEMRVDLLSVSCL-------ELKKLMELAPISILAW 56
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+P+ + D ++++L +L +Y+D E + + H + I S
Sbjct: 57 KKPESCS---QADWIDKMQSL---AELNPNYLDLEKDFPEEDMIRIRQLHPQ-IKIIRSL 109
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ T D+ L + M+++ AD K S + T++ I +G
Sbjct: 110 H----TSEHTDIIQLYAHMRSSAADYYKFAVSSSSTTDLLDICHQKRSLPENTTVVCLGG 165
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTY--KVEHINADTKVFGLI---S 245
G S++LSP Y G+ + P SL+ Y ++A + + LI S
Sbjct: 166 MGRPSRILSPILQNPFTYARSTGSSPVA-PGQFSLKHHYFYNFASLSAQSPICALIGDTS 224
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
+ +GH + HNP F + Y+ P+ +L KFFST + F G SV P K AV
Sbjct: 225 RSIGH----LTHNPFFSQLGVACPYIKLPLTPQELPKFFSTIRTQPFLGVSVTSPLKTAV 280
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ F D+ P +A + NT++ R G++ G++TD E G +
Sbjct: 281 LPFLDKQAPSVKASGSCNTLVIR--QGEIEGHDTDGE-------------GLFSVLMQHQ 325
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
PL + + GAGGA +++A ++IF+
Sbjct: 326 IPLNNQRVAIIGAGGATQSIATRLSRANCELLIFN 360
>gi|145577903|gb|ABP82670.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 16/147 (10%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 GIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV 395
+ +L GAGGA RA+ F G + +
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEI 133
>gi|392941090|ref|ZP_10306734.1| shikimate 5-dehydrogenase [Thermoanaerobacter siderophilus SR4]
gi|392292840|gb|EIW01284.1| shikimate 5-dehydrogenase [Thermoanaerobacter siderophilus SR4]
Length = 292
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA+TK++GLI PV HS P++HN F ++ N +Y V + L+ +
Sbjct: 11 INANTKLYGLIGHPVEHSLSPLIHNYAFNSLDLNCVYTAFDVLPEKLEDAVKGAKALGIK 70
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+KE ++K+ D V A I AVNT++ G L GYNTD
Sbjct: 71 GFNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDV------------ 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G+ + G + GR V+ GAGGA +A+ +G +I
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSII 160
>gi|157693067|ref|YP_001487529.1| shikimate 5-dehydrogenase [Bacillus pumilus SAFR-032]
gi|157681825|gb|ABV62969.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
Length = 280
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 16/146 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I PVGHS P +HN + +G Y V DDLK + + +GF+V
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAINGMKALGISGFNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K +M++ D++ A+ + AVNT+ R +G+L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVDIMQYLDKIDVTAERLRAVNTV--RLEEGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRAL 383
PL F+L GAGGA RA+
Sbjct: 117 -------PLTELSFLLIGAGGAARAI 135
>gi|374710081|ref|ZP_09714515.1| shikimate 5-dehydrogenase [Sporolactobacillus inulinus CASD]
Length = 295
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-FVDDLKKFFSTYSSPD 289
++ IN T+++GL + P HS P++HN +FR N +Y+ DL ++ D
Sbjct: 2 IDTINGHTRLYGLFAHPAKHSLSPLMHNLSFRKRGINAVYLAFDMTGDLGDAVNSIRQFD 61
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G ++ P+K V+ F DE+ P A I AVNTI+ R DG LIG NTD
Sbjct: 62 MGGVNLSMPFKRTVIPFLDELTPTADLIGAVNTIMNR--DGHLIGANTDGT--------- 110
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G+ A+ G + + GAGGAG ++ S+G +
Sbjct: 111 ----GFFAHLAANGYATNRKTATVLGAGGAGLSIIAAGASKGLSTI 152
>gi|444319524|ref|XP_004180419.1| hypothetical protein TBLA_0D04030 [Tetrapisispora blattae CBS 6284]
gi|387513461|emb|CCH60900.1| hypothetical protein TBLA_0D04030 [Tetrapisispora blattae CBS 6284]
Length = 1584
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 176/403 (43%), Gaps = 44/403 (10%)
Query: 7 TKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKK 63
TK ++ +C L + + + N+ +A G D VE+R+D +++ K + I+ T
Sbjct: 1069 TKRSSFVC--LTFNDLTKEVDNL-RAITYGCDAVEVRVDHLSDLNCANVSKQISILRTST 1125
Query: 64 -PLPVLIVYRPKWAGGLYEGDE-HKRLEALHLAEDLGADYVDFELKVASNI----LGKQY 117
LP++ R + GG + E + LA G +++D EL + +++ L +
Sbjct: 1126 DSLPIIFTVRTEEQGGKFPNKEIKLLKKLFLLALKAGVEFIDIELTLPTSVQYMVLNSKG 1185
Query: 118 SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL- 176
+ G+ + + E P E+ ++ A DIIK V S ++ + +
Sbjct: 1186 KTRVIGSHHDFNGSYGWEEPEWENR---YNQALAMDVDIIKFVGSAKKFSDNLALERFRE 1242
Query: 177 SHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA 236
+H P+IA ++ G +S++L+P F + L G G ++ + + Y
Sbjct: 1243 NHTSKPLIAVNMSALGKISRVLNP-FMTPITSELLPGVAAPGQLSLSEINKIYTTIGGFT 1301
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLK-------KFFSTYSSPD 289
+ K++ ++ P+ HS+ PILHN YN + +P D + K P
Sbjct: 1302 EKKLY-VVGSPISHSRSPILHN-----TGYNILGLPYKFDKFETDNVARVKEALLDGEPQ 1355
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA-IED 348
G +V P K +M++ E+ A+ I AVNT+I +GK G NTD + + I +
Sbjct: 1356 LGGLAVTIPLKLDIMQYMSELTDAAKIIGAVNTVIPL-GNGKFKGDNTDWLGIVNSLIGN 1414
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ E+ L+ ++ GAGG RA + K G
Sbjct: 1415 GVPEK------------LSNTCGLIVGAGGTSRAAVYALKQLG 1445
>gi|253827963|ref|ZP_04870848.1| shikimate 5-dehydrogenase [Helicobacter canadensis MIT 98-5491]
gi|313142530|ref|ZP_07804723.1| shikimate 5-dehydrogenase [Helicobacter canadensis MIT 98-5491]
gi|253511369|gb|EES90028.1| shikimate 5-dehydrogenase [Helicobacter canadensis MIT 98-5491]
gi|313131561|gb|EFR49178.1| shikimate 5-dehydrogenase [Helicobacter canadensis MIT 98-5491]
Length = 262
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 20/158 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
F +I P+ HS P+LHN FR + G Y +D+ + F ST +S G +V PYK
Sbjct: 3 FAVIGNPITHSLSPLLHNSAFRTLGIKGYYGRYCLDNSENF-STLTSLKLKGANVTIPYK 61
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E CDEV +A+ I AVNT++ + + KL+GYNTD IE + +KN
Sbjct: 62 ETAFSHCDEVFGIAKQIQAVNTLVFK--ENKLLGYNTDALGFYQCIE----KFQFKNA-- 113
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
++ GAGG+ +A+A K +G I +
Sbjct: 114 -----------LILGAGGSAKAVACILKDKGITTTILN 140
>gi|145577927|gb|ABP82682.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
oswaldocruzi]
Length = 238
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQFISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L GAGGA RA+ F G +
Sbjct: 107 KRILLLGAGGASRAIYFSLADAGVK 131
>gi|415885593|ref|ZP_11547521.1| shikimate 5-dehydrogenase [Bacillus methanolicus MGA3]
gi|387591262|gb|EIJ83581.1| shikimate 5-dehydrogenase [Bacillus methanolicus MGA3]
Length = 279
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K+FG+I P+ HS P++HN F + Y P V DL + + +GF+V
Sbjct: 3 KLFGVIGDPISHSMSPVMHNDLFMVYGIDAHYHPFHVKRGDLGAAVQGLKAINCSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +M F DE+ PLA+AI AVNT++ +GKLIGYNTD + ++ +
Sbjct: 63 VPHKTEIMTFLDEIDPLAEAIGAVNTVVHE--EGKLIGYNTDGHGFLEGLK--------R 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
T S + + ++ GAGGA +A+ + G + + F
Sbjct: 113 KFTVSDSTKV-----LIIGAGGAAKAIFYSMAHAGVKHIDF 148
>gi|354568130|ref|ZP_08987296.1| Shikimate dehydrogenase [Fischerella sp. JSC-11]
gi|353541095|gb|EHC10565.1| Shikimate dehydrogenase [Fischerella sp. JSC-11]
Length = 287
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I P+ HS P++HN + + +Y+P + +DL +++
Sbjct: 2 ITGKTKLLGVIGYPIEHSLSPVMHNAAIAQLGIDYVYLPFPIKPEDLHTAIQGFAAIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A+++ V P+AQA+ AVNT+I++ + IG NTD E + ++ +
Sbjct: 62 GFSVTIPHKQAILRSLSAVEPIAQAVGAVNTVIKK--NNSWIGTNTDIEGFLAPLQAHQQ 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
K + V+ G GGA RA+ G G
Sbjct: 120 NWSQK-------------IAVILGNGGAARAVVAGCAKLG 146
>gi|323349301|gb|EGA83528.1| Aro1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1588
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 165/381 (43%), Gaps = 47/381 (12%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G VE+R+D + N+ K L I+ +P++ R GG + +E K L L
Sbjct: 1099 GCXAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTYSS-----------PDFAGFSVGFPYKEAVMKFCDEVHPLA 314
Y + +P D F T S+ +F G +V P K +M++ DE+ A
Sbjct: 1329 YEILGLPHKFDK----FETXSAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAA 1384
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
+ I AVNT+I + K G NTD I +A+ NG + AG ++
Sbjct: 1385 KVIGAVNTVIPL-GNKKFKGDNTDW----LGIRNAL----INNGVPEYVGHTAG---LVI 1432
Query: 375 GAGGAGRALAFGAKSRGARVV 395
GAGG RA + S G + +
Sbjct: 1433 GAGGTSRAALYALHSLGCKKI 1453
>gi|145577945|gb|ABP82691.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
graciosensis]
Length = 238
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H++ + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLSMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR 393
+ +L GAGGA RA+ F G +
Sbjct: 107 KRILLLGAGGASRAIYFSLTDVGVK 131
>gi|304316729|ref|YP_003851874.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778231|gb|ADL68790.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 283
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
H+NA T ++G+I P+GHS P +HN F VN N +YV V ++LK +
Sbjct: 2 HVNAKTDIYGIIGHPIGHSLSPFIHNAAFESVNLNSVYVSFDVHEENLKDAILGIKALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE VMK+ D + A+ I AVNTI + ++G L GYNTD +T +++
Sbjct: 62 KGINVTVPHKENVMKYLDYISDEAKLIGAVNTI--KNNNGILEGYNTD----VTGFTESL 115
Query: 351 KER 353
KE
Sbjct: 116 KEH 118
>gi|373494926|ref|ZP_09585521.1| shikimate 5-dehydrogenase [Eubacterium infirmum F0142]
gi|371967062|gb|EHO84539.1| shikimate 5-dehydrogenase [Eubacterium infirmum F0142]
Length = 291
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
+++I+ +K++ L + P HS P++ N F +N N +Y+ V D + + +
Sbjct: 1 MKNIDGKSKLYALFASPCEHSISPLIQNSAFEKMNINAVYMAFDVGTDKIADAVLSMRTL 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
AG ++ P K AV+K+ DE+ A+ AVNT++ R DGKL GYNTD S AIED
Sbjct: 61 GIAGANISMPNKTAVIKYLDEISDDARFCNAVNTVVNR--DGKLYGYNTDIFGSEKAIED 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIF 397
G + L G GGAG+A+ + AK+ +V +F
Sbjct: 119 -------------LGINITNSKVCLLGLGGAGQAVLYTLAKNNVNKVCVF 155
>gi|428316838|ref|YP_007114720.1| shikimate dehydrogenase [Oscillatoria nigro-viridis PCC 7112]
gi|428240518|gb|AFZ06304.1| shikimate dehydrogenase [Oscillatoria nigro-viridis PCC 7112]
Length = 348
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 25/187 (13%)
Query: 228 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTY 285
+ + + I TK+ G+I PV HS P +HN H+ + +Y+P V DLK + +
Sbjct: 21 SQRTKMIKGTTKLLGVIGHPVEHSLSPAMHNAAISHLGVDFVYLPFPVKPGDLKAALAGF 80
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
++ GFS+ P+K+A++ EV P+A++I AVNT+ +D G NTD E +
Sbjct: 81 AAIGVRGFSITIPHKQAILPLLSEVSPIARSIGAVNTVYM--TDRGWCGTNTDVEGFLAP 138
Query: 346 IE------------DAIK--ERGYKN-------GTASFGSPLAGRMFVLAGAGGAGRALA 384
++ DAI ERG A GS + ++ V+ G GGA RA+
Sbjct: 139 LQTPPTPPYQGGAKDAISALERGNTAVESCPPPSGARGGSDWSQKVAVILGNGGAARAVV 198
Query: 385 FGAKSRG 391
G G
Sbjct: 199 AGCAQLG 205
>gi|390939775|ref|YP_006403512.1| shikimate 5-dehydrogenase [Sulfurospirillum barnesii SES-3]
gi|390192882|gb|AFL67937.1| shikimate 5-dehydrogenase [Sulfurospirillum barnesii SES-3]
Length = 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
+F + PV HS P LHN + +N +G Y+ +++ T+ + +G +V P+
Sbjct: 3 LFSIFGYPVAHSISPRLHNAVMQGLNLDGCYIRTPIENPNALMQTFKTLQLSGANVTVPH 62
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KE CDEV +AQ I A+NT++R S ++IGYNTD E G+
Sbjct: 63 KEVAFTQCDEVRGIAQKIGAINTLVREGS--RVIGYNTDAE-------------GFYEAI 107
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
SFG+ ++ GAGG +A+A K+ G I +
Sbjct: 108 KSFGTLHNA---LILGAGGTAKAIAMILKTHGIETTILN 143
>gi|333910252|ref|YP_004483985.1| shikimate dehydrogenase [Methanotorris igneus Kol 5]
gi|333750841|gb|AEF95920.1| Shikimate dehydrogenase [Methanotorris igneus Kol 5]
Length = 283
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA TK+ GL+ PV HS PI+HN FR N N +Y+ V ++LK +
Sbjct: 2 INAKTKLIGLLGHPVEHSFSPIMHNAAFRDKNLNYVYLAFDVLPENLKYVIDGAKAMGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ A+ I AVNTI + + K +GYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDENAKLIGAVNTI--KIENNKAVGYNTDGLGARMALEEEIG 119
Query: 352 ER 353
++
Sbjct: 120 KK 121
>gi|9087115|sp|O26344.2|AROE_METTH RecName: Full=Shikimate dehydrogenase
Length = 283
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T V G++ P+GHS PI+HN FR + + IYVP V ++LK +
Sbjct: 2 ITGKTHVTGIMGHPLGHSLSPIMHNAAFRSLGMDWIYVPFPVKPENLKAAVEGLRALGVE 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAV+++ D++H A I AVNT+ + DG + GYNTD + A+E+
Sbjct: 62 GVNVTIPHKEAVLEYIDDIHGTAALIGAVNTL--KFDDGTVRGYNTDASGCLRALEEVTS 119
Query: 352 ERG 354
G
Sbjct: 120 VEG 122
>gi|392960610|ref|ZP_10326077.1| Shikimate dehydrogenase [Pelosinus fermentans DSM 17108]
gi|421054632|ref|ZP_15517598.1| shikimate 5-dehydrogenase [Pelosinus fermentans B4]
gi|421058184|ref|ZP_15520904.1| Shikimate dehydrogenase [Pelosinus fermentans B3]
gi|421067306|ref|ZP_15528799.1| Shikimate dehydrogenase [Pelosinus fermentans A12]
gi|421071495|ref|ZP_15532612.1| Shikimate dehydrogenase [Pelosinus fermentans A11]
gi|392440621|gb|EIW18294.1| shikimate 5-dehydrogenase [Pelosinus fermentans B4]
gi|392447014|gb|EIW24280.1| Shikimate dehydrogenase [Pelosinus fermentans A11]
gi|392449968|gb|EIW27032.1| Shikimate dehydrogenase [Pelosinus fermentans A12]
gi|392454854|gb|EIW31668.1| Shikimate dehydrogenase [Pelosinus fermentans DSM 17108]
gi|392461302|gb|EIW37514.1| Shikimate dehydrogenase [Pelosinus fermentans B3]
Length = 281
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I + TK G++ P+GHS PI+HN F+ ++ + +Y+P+ V ++L + + + +F
Sbjct: 2 ITSKTKKIGILGWPLGHSLSPIMHNAAFKSLHLDYVYIPLPVHPENLAQAVAGLKAMEFT 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI 346
G +V P+K +M + DE+ AQ + AVNT++ + DGK IGYNTD + + +I
Sbjct: 62 GVNVTIPHKVEIMSYLDEIDFSAQLVGAVNTVVIK--DGKTIGYNTDAQGFVQSI 114
>gi|261349968|ref|ZP_05975385.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2374]
gi|288860751|gb|EFC93049.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2374]
Length = 281
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 80/154 (51%), Gaps = 20/154 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN TK+ GLI PV HS P +HN F + + YVP V ++LK S +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K VMK+ D++ +A+ I AVNTI + ++ GYNTD I AI +
Sbjct: 62 GFNVTIPHKINVMKYLDKLDSIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAIGEV-- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
+ + + V+AGAGGA RA++F
Sbjct: 116 ------------TSIKDKNIVVAGAGGASRAISF 137
>gi|238598730|ref|XP_002394684.1| hypothetical protein MPER_05383 [Moniliophthora perniciosa FA553]
gi|215464118|gb|EEB95614.1| hypothetical protein MPER_05383 [Moniliophthora perniciosa FA553]
Length = 518
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 166/391 (42%), Gaps = 53/391 (13%)
Query: 36 GADVVEIRLDCINNFQPGKDLEI-----------------ILTKKPLPVLIVYRPKWAGG 78
G D +E+R+D + + +D+EI + PLP++ R GG
Sbjct: 7 GVDALELRVDLLRS---PRDVEIAGHHIPDRSYVADQVAALRRVSPLPIVYTVRTASQGG 63
Query: 79 LY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP 137
+ + K E L LA LG +Y+D E+ + + K S + ++ I S + D
Sbjct: 64 AFPDNAPDKAFELLELALILGVEYIDVEISLPEEKI-KTLISRKGASQIIASWH-DWSGN 121
Query: 138 SEEDLGYLVSR--MQATGADIIKLVFSVNDITEIARIFQLLSHCQ-----VPIIAYSVGE 190
+ D + ++ + + DI+K+V N++ + + ++ P +A ++G
Sbjct: 122 MKWDGAEVQAKYDLADSLGDIVKIVGKANNLQDNPELQHFVTKVNRRTNAKPFLAINMGT 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPV 248
G +S++L N + P P S + + H+ K F L P+
Sbjct: 182 EGQMSRIL----NTTTTPVTHPLLPNRAAPGQLSFAEIQQALHLLGQKPHKKFYLFGNPI 237
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDL-KKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P LHN F+ + Y D + K+ ++P+F G SV P+K ++
Sbjct: 238 SHSLSPTLHNTGFQLLGLPYDYSLFQTDGIGKEIRDIIAAPNFGGASVTIPFKLDIISVL 297
Query: 308 DEVHPLAQAIAAVNTII-RRPSDGKLIGY--NTDCEASITAIEDAIKERGYKNGTASFGS 364
DE+ P A+++ AVNTI+ + +DG I Y NTD G K ++ +
Sbjct: 298 DELSPAAKSMGAVNTIVAKSAADGSRILYGDNTDW-------------LGIKGSISARIA 344
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
P + ++ G+GG RA + GA+ +
Sbjct: 345 PGSIHAALIIGSGGTARAAIYALHDLGAKCI 375
>gi|169829301|ref|YP_001699459.1| shikimate dehydrogenase [Lysinibacillus sphaericus C3-41]
gi|238688192|sp|B1HUI4.1|AROE_LYSSC RecName: Full=Shikimate dehydrogenase
gi|168993789|gb|ACA41329.1| Shikimate dehydrogenase [Lysinibacillus sphaericus C3-41]
Length = 276
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K F +I P+ HSK P +HN F ++ Y+P+ V + L + + +G++V
Sbjct: 3 KWFAVIGDPIEHSKSPAMHNAWFEEMSVEATYIPLHVSSEQLGAAVAGLKTLGASGWNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
P+K A++ + DE+ LAQ + AVNT++R ++GKLIGYNTD + ++E+A+
Sbjct: 63 IPHKTAIIPYLDELDELAQKMGAVNTVVRT-TEGKLIGYNTDGVGFVRSLEEAV 115
>gi|336248713|ref|YP_004592423.1| 3-dehydroquinate dehydratase [Enterobacter aerogenes KCTC 2190]
gi|334734769|gb|AEG97144.1| 3-dehydroquinate dehydratase [Enterobacter aerogenes KCTC 2190]
Length = 251
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL---- 56
V NIT + T+IC PL+ ++++++L+N GAD++E R+D + + +
Sbjct: 7 VKNITFKEGETLICVPLIGKTLDELLTNAQGLVDAGADIIEWRVDHFTHVREIPQVLAAL 66
Query: 57 -EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
EI T K LP+L +R K GG E + E A G D +D EL + I
Sbjct: 67 AEIRHTLKALPLLFTFRSKKEGGETEISDEAYFELNRQAALSGLVDVIDIELFNDEAQIR 126
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+HQ+G + I+S + +TP++ED+ Y + RMQ GAD+ K+ + D+ +
Sbjct: 127 ALVNDAHQAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQTPQDVLTLL 186
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 187 SATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKLREL 246
Query: 229 YKV 231
+
Sbjct: 247 MDI 249
>gi|296273395|ref|YP_003656026.1| shikimate 5-dehydrogenase [Arcobacter nitrofigilis DSM 7299]
gi|296097569|gb|ADG93519.1| shikimate 5-dehydrogenase [Arcobacter nitrofigilis DSM 7299]
Length = 269
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
++ + + F + PV HSK P +HN F H+N N Y + D KK T++ + G
Sbjct: 1 MSQEKEKFLIFGNPVEHSKSPQMHNSAFEHLNINSYYDKYLLTDGKKIKDTFNHENAKGA 60
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
++ P+KE + DEV +A I AVNT I++ D K+ YNTD + AI+D
Sbjct: 61 NITVPFKEDAFRQADEVVGIANEIEAVNTYIKK--DNKVFAYNTDAPGFMKAIKD----- 113
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
FG + ++ GAGG +A+A K V I +
Sbjct: 114 --------FGKI---KSVLILGAGGTAKAIAMALKEENIEVRILN 147
>gi|357235553|ref|ZP_09122896.1| shikimate dehydrogenase [Streptococcus criceti HS-6]
gi|356883535|gb|EHI73735.1| shikimate dehydrogenase [Streptococcus criceti HS-6]
Length = 288
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ ++++P+ HS P +HN F NG+YV + +DL++ D
Sbjct: 2 QIDGYTRMAAVVARPIKHSISPFIHNYAFDITGVNGVYVAWDIPEEDLQESVQNVRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+ V+ F DE+ AQ I AVNT++ R G L+GYNTD A+E
Sbjct: 62 FGINISMPYKQVVIPFLDELDQAAQLIGAVNTVVNR--QGHLVGYNTDGYGFFKALE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD 398
G + + + G GGA ++ A GA R+ IF+
Sbjct: 117 ---------KDDGLTIKDKTMTILGGGGAATSIIVQAALNGAKRINIFN 156
>gi|261402316|ref|YP_003246540.1| shikimate 5-dehydrogenase [Methanocaldococcus vulcanius M7]
gi|261369309|gb|ACX72058.1| shikimate 5-dehydrogenase [Methanocaldococcus vulcanius M7]
Length = 283
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA TKV GLI PV HS PI+HN F+ N +YV V + L S
Sbjct: 2 INAKTKVVGLIGHPVEHSFSPIMHNTAFKDKKLNYVYVAFDVLPEHLGDAIKGAKSLGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K VMK+ DE+ A+ I AVNT+ + +GK IGYNTD + A+E+ I
Sbjct: 62 GFNITIPHKIEVMKYLDEIDKDAKLIGAVNTV--KIDNGKAIGYNTDGIGARRALEEEIG 119
Query: 352 ERGYKN 357
E KN
Sbjct: 120 EVKGKN 125
>gi|375086215|ref|ZP_09732637.1| shikimate 5-dehydrogenase [Megamonas funiformis YIT 11815]
gi|374566077|gb|EHR37330.1| shikimate 5-dehydrogenase [Megamonas funiformis YIT 11815]
Length = 286
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRH--VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSV 295
TK G+I P+ HS P++ N + ++Y I +P+ +DL+K + +F GF+V
Sbjct: 7 TKNLGVIGYPIKHSLSPVIQNTAIQEAGIDYAYIAMPIAPEDLEKAVIGLKALNFTGFNV 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K +M++ DE+ +A+ I AVNT+ DGKL GYNTD G+
Sbjct: 67 TIPHKVNIMQYLDEIDEMAKLIGAVNTV--HIKDGKLYGYNTDA-------------IGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
N + + V+ GAGGA RA+ G +G + +I
Sbjct: 112 INPLLKENVEIKDKTAVILGAGGACRAVVCGLIKQGIKNIIL 153
>gi|327507676|sp|B3LGE9.1|ARO1_YEAS1 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|190404911|gb|EDV08178.1| 3-dehydroquinate dehydratase [Saccharomyces cerevisiae RM11-1a]
Length = 1588
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 165/377 (43%), Gaps = 39/377 (10%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFLDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTY-------SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIA 318
Y + +P D + + + +F G +V P K +M++ DE+ A+ I
Sbjct: 1329 YEILGLPHKFDKFETGSAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIG 1388
Query: 319 AVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG 378
AVNT+I + K G NTD I +A+ NG + AG ++ GAGG
Sbjct: 1389 AVNTVIPL-GNKKFKGDNTDW----LGIRNAL----INNGVPEYVGHTAG---LVIGAGG 1436
Query: 379 AGRALAFGAKSRGARVV 395
RA + S G + +
Sbjct: 1437 TSRAALYALHSLGCKKI 1453
>gi|289578257|ref|YP_003476884.1| shikimate 5-dehydrogenase [Thermoanaerobacter italicus Ab9]
gi|297544537|ref|YP_003676839.1| shikimate 5-dehydrogenase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289527970|gb|ADD02322.1| shikimate 5-dehydrogenase [Thermoanaerobacter italicus Ab9]
gi|296842312|gb|ADH60828.1| shikimate 5-dehydrogenase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 284
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 290
IN+ TK+FGLI PV HS P++HN F+ +N N +Y +F + L+ +
Sbjct: 2 EINSKTKLFGLIGHPVEHSLSPLIHNYAFKSLNLNYVYTVFDVFPEKLEDAVKGIKALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 62 KGVNVTIPHKEKIIKYLDVVSEEALKIGAVNTLVNE--EGILKGYNTDV----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
G+ + G + G+ V+ GAGGA +A+
Sbjct: 109 --YGFIDSLTEVGEKIKGKKAVVLGAGGASKAV 139
>gi|378727120|gb|EHY53579.1| pentafunctional AROM polypeptide [Exophiala dermatitidis NIH/UT8656]
Length = 1624
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 165/376 (43%), Gaps = 45/376 (11%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLY-EGDE 84
G+D VE+R+D + + P + L ++ PLPV+ R GG + + +
Sbjct: 1080 GSDAVELRVDLLKDPDSQSAIPSTEYVTSQLSLLRATVPLPVVFTVRTSSQGGRFPDTAQ 1139
Query: 85 HKRLEALHLAEDLGADYVDFELKVASNILGKQYSS--HQSGTRFIVSCNLDCETPSEEDL 142
+ L+ LA +G ++VD E+ I+ ++ S ++ I S + S
Sbjct: 1140 AEYLQLCTLAIRMGCEFVDLEVATFPEIVLISIAALKSSSNSKIIASHHDPQGRLSWSKP 1199
Query: 143 GY---LVSRMQATGADIIKLV---FSVNDITEIARIFQLLS--HCQVPIIAYSVGERGLV 194
G L +R G D++KL+ +++D + R Q + H +P+IA ++G G
Sbjct: 1200 GSWIPLYNRCLQYG-DVVKLIGVAQTIDDNFSLRRFKQWSAEQHPDLPLIAINMGRAGQA 1258
Query: 195 SQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHS 251
S++L NG + S P P + + +RQ + A K F L P+ S
Sbjct: 1259 SRVL----NGFMTPVSHPALPFKAAPGQLSAKEIRQGLTLLGELA-PKQFLLFGSPIQAS 1313
Query: 252 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311
K P++HN F IY + + + + DF G SV P K VM DEV
Sbjct: 1314 KSPVMHNRLFAETGLPHIYSLCETTSVDEVKARIRAEDFGGASVTIPLKLDVMPLLDEVD 1373
Query: 312 PLAQAIAAVNTII----RRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS-PL 366
A+ I AVNTI+ + +L+GYNTD + D ++ G +A+ G P
Sbjct: 1374 ETARLIGAVNTIVPVQDLQSQKTRLVGYNTD----YLGMMDCLRAAG---ASAAIGDVPQ 1426
Query: 367 AGRMFVLAGAGGAGRA 382
+G ++ G GG RA
Sbjct: 1427 SG---LVIGGGGTARA 1439
>gi|256752529|ref|ZP_05493385.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748595|gb|EEU61643.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
Length = 292
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
INA+TK++GLI PV HS P++HN F ++ N +Y V + L++ +
Sbjct: 10 EINANTKLYGLIGHPVEHSLSPLIHNYAFNSLDLNCVYTVFDVLPEKLEEAVKGVKALGI 69
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE ++K+ D + A I AVNT++ +G L GYNTD
Sbjct: 70 RGVNVTVPHKEKIIKYLDVISEEALKIGAVNTVVNE--EGILKGYNTDV----------- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
G+ + G + GR V+ GAGGA +A+ +G +I
Sbjct: 117 --YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIII 161
>gi|223933656|ref|ZP_03625634.1| shikimate 5-dehydrogenase [Streptococcus suis 89/1591]
gi|302023999|ref|ZP_07249210.1| shikimate 5-dehydrogenase [Streptococcus suis 05HAS68]
gi|330833048|ref|YP_004401873.1| shikimate 5-dehydrogenase [Streptococcus suis ST3]
gi|386584438|ref|YP_006080841.1| shikimate 5-dehydrogenase [Streptococcus suis D9]
gi|223897686|gb|EEF64069.1| shikimate 5-dehydrogenase [Streptococcus suis 89/1591]
gi|329307271|gb|AEB81687.1| shikimate 5-dehydrogenase [Streptococcus suis ST3]
gi|353736584|gb|AER17593.1| shikimate 5-dehydrogenase [Streptococcus suis D9]
Length = 289
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 17/168 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ + D++ A+ I AVNT+I + DGKLIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDDLTASARLIGAVNTVIHK--DGKLIGHNTDGIGFFKSLE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF 397
+ +G++ + + + G GGA A+ A GA+ + IF
Sbjct: 117 RLKGFQ---------VKNKRLTILGGGGASTAIIAQATLDGAKEITIF 155
>gi|374585221|ref|ZP_09658313.1| shikimate dehydrogenase [Leptonema illini DSM 21528]
gi|373874082|gb|EHQ06076.1| shikimate dehydrogenase [Leptonema illini DSM 21528]
Length = 292
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 16/156 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFF-STYSSPD 289
++ I + VFG+ PV HS PILHN TF + +NG+YVP VD F
Sbjct: 1 MKGITGQSAVFGIFGNPVSHSISPILHNRTFEKMGFNGVYVPFCVDQTGPFLKKAVLHMG 60
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT-IIRRPSDGKLI-GYNTDCEASITAIE 347
+G SV P+K K D+ L++ A NT ++R +G+++ +NTD ++ A++
Sbjct: 61 LSGLSVTIPHKLWAAKAADQRDALSELTGAANTLLVRETRNGRILSAHNTDGPGAMRALQ 120
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
A+ + L GR V+AG GG+ RA+
Sbjct: 121 TAVPD-------------LKGRRVVIAGYGGSARAI 143
>gi|414076194|ref|YP_006995512.1| shikimate dehydrogenase [Anabaena sp. 90]
gi|413969610|gb|AFW93699.1| shikimate dehydrogenase [Anabaena sp. 90]
Length = 288
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ G+I PV HS P++HN + + +Y+P V ++L++ + ++S
Sbjct: 2 ITGKTQLLGVIGHPVSHSLSPLMHNAALAKLGLDYVYLPFPVAPENLERAIAGFASIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFS+ P+K+A++ E+ P+AQAI AVNT+ R+ + +G NTD I ++
Sbjct: 62 GFSITIPHKQAILPLLSEISPIAQAIGAVNTVTRQGDN--WVGTNTDVAGFIAPLQ---- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ + + V+ G GGA RA+ G G
Sbjct: 116 --------TTYHQDWSQKKAVILGNGGAARAVVAGCIQLG 147
>gi|421859666|ref|ZP_16291870.1| shikimate 5-dehydrogenase [Paenibacillus popilliae ATCC 14706]
gi|410830764|dbj|GAC42307.1| shikimate 5-dehydrogenase [Paenibacillus popilliae ATCC 14706]
Length = 297
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ T VF +I P+ HS P++HN R + N +Y V + L++ +
Sbjct: 16 IDSSTAVFAVIGDPIKHSTSPLMHNAALRELGLNAVYTAFHVASEQLEQAVQGMRALGMC 75
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KEAVM DEV A I AVNTI+ R G+LIGYNTD + ++++ I
Sbjct: 76 GMNVTIPHKEAVMAHLDEVDESASVIGAVNTIVNR--SGRLIGYNTDGLGFVRSLQEEI 132
>gi|134045230|ref|YP_001096716.1| 3-dehydroquinate dehydratase [Methanococcus maripaludis C5]
gi|166219204|sp|A4FWC6.1|AROD_METM5 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|132662855|gb|ABO34501.1| 3-dehydroquinate dehydratase [Methanococcus maripaludis C5]
Length = 218
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ + + +++ +A G D+VE R+D +NN E I +P +I
Sbjct: 1 MICIPVIDEDMSDAINSAKEALKYG-DIVEFRVDLLNNVT----FEDITEFSKIPSIITI 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI-LGKQYSSHQSGTRFIVSC 130
R +W GG ++ +R+E L A A +VD ELK N+ L K + +S T+ IVS
Sbjct: 56 RAEWEGGAWKKSNEERIELLKHAIKNNAKFVDIELKEEKNLELVKYRNEIRSNTKIIVSY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TP ++L +V + G DI K N + +I L++ IIA +GE
Sbjct: 116 HDFEKTPEIDELIDVVEKELKIG-DIAKFATFANSKEDTLKILNLMNKYYGKIIAIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKG 213
G ++++L F L + S++G
Sbjct: 175 SGKLTRILGLDFGSILTFASMEG 197
>gi|406861586|gb|EKD14640.1| arom [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1572
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 31/327 (9%)
Query: 36 GADVVEIRLDCINNFQPGK--------DLEIILTKK--PLPVLIVYRPKWAGGLYEGD-E 84
G+D VE+R+D + + L+I + LP++ R GG + D +
Sbjct: 1071 GSDAVEVRVDLLEDPNSANGIPTAEFLSLQIAHLRSIVTLPLIYTVRTVSQGGRFPDDAQ 1130
Query: 85 HKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+ L+ A +G +Y+D E+ + +L Q + G I++ + D + G
Sbjct: 1131 DEALKLFKAAVRMGLEYIDLEITSSDELL--QSVTENKGFSKIIASHHDPQGKLSWKNGA 1188
Query: 145 LV---SRMQATGADIIKLVFSVNDITE---IARI-FQLLSHCQVPIIAYSVGERGLVSQL 197
+ +R G DIIKLV S + + +A+ + + VP+IA ++G G +S++
Sbjct: 1189 WIQHYNRALEYG-DIIKLVGSAKTMEDNFALAKFKANMAAAHDVPLIAINMGVIGKLSRM 1247
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPI 255
L NG + S P P S + + + + K F L P+ S+ P
Sbjct: 1248 L----NGFMTPVSHPALPFKAAPGQLSAAEICQGLSLLGEIEPKAFYLFGTPIAASRSPA 1303
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
LHN F+ Y + D+++ S SPDF G SV P K ++ D++ A+
Sbjct: 1304 LHNTLFQQTGLPHHYSRLETDNIEDVRSVIRSPDFGGASVTIPLKLDIIPLLDDITEAAK 1363
Query: 316 AIAAVNTII---RRP-SDGKLIGYNTD 338
I AVNT++ RP S +L+G NTD
Sbjct: 1364 IIGAVNTVVPVTTRPGSPPRLVGENTD 1390
>gi|409385048|ref|ZP_11237769.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus raffinolactis
4877]
gi|399207426|emb|CCK18684.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus raffinolactis
4877]
Length = 272
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
IN TK+ +++ P+ HS P +HN F HV NG+Y+ DL + + D
Sbjct: 2 EINGYTKLAAVVANPIKHSLSPFIHNLAFDHVGENGVYLAFETPEADLGSVIESIKTLDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEA + + DE+ +A+ A+NTI+ R DGKL G +TD ++
Sbjct: 62 YGVNLSMPYKEAAVPYMDELSEVAKLTGAINTIVNR--DGKLFGTSTDGAGFFKSL---- 115
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ +K + G + GAGGA R++ A +GAR +
Sbjct: 116 --KHFK---------VKGSTITVIGAGGAARSIIAEAAVQGARQI 149
>gi|150402110|ref|YP_001329404.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C7]
gi|166219473|sp|A6VFM7.1|AROE_METM7 RecName: Full=Shikimate dehydrogenase
gi|150033140|gb|ABR65253.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C7]
Length = 280
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ TK+ GLI PV HS PI+HN + N +Y+ V ++LK S +
Sbjct: 2 MDTKTKLLGLIGHPVDHSFSPIMHNTAIEDLGINYVYLAFDVSEENLKNVVSGAKALQIT 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD + +E+
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKAIGAVNTV--KIENGKAIGYNTDGIGAKRTLEEK-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
L + ++ G+GGA RA+ F
Sbjct: 118 -----------AGILIDKNILIIGSGGASRAVCF 140
>gi|428213951|ref|YP_007087095.1| shikimate dehydrogenase [Oscillatoria acuminata PCC 6304]
gi|428002332|gb|AFY83175.1| shikimate dehydrogenase [Oscillatoria acuminata PCC 6304]
Length = 288
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ G+I PV HS P++HN + + +Y+P V DL + +++
Sbjct: 4 ITGTTQLLGVIGYPVKHSLSPVMHNAAITDMGVDFVYLPWPVAPSDLPTAIAGFAAIGVR 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFS+ P+K+A+M E+ P+AQA+ AVNT+ R P+ G NTD E + +
Sbjct: 64 GFSITIPHKQAIMPLLSEISPVAQAVGAVNTVWRTPTGWA--GTNTDVEGFLAPL----- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
K G + LA V+ G GGA RA+ G G
Sbjct: 117 ----KGGDRPWHQTLA----VILGCGGAARAVVAGLAQLG 148
>gi|428203364|ref|YP_007081953.1| shikimate 5-dehydrogenase [Pleurocapsa sp. PCC 7327]
gi|427980796|gb|AFY78396.1| shikimate 5-dehydrogenase [Pleurocapsa sp. PCC 7327]
Length = 288
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN H+ N +YVP V DL+K + + +
Sbjct: 4 ITGKTKLLGVIGDPVEHSLSPVMHNAAIAHLRVNYVYVPFPVKGKDLEKAIAGFEAIGVV 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A++ EV AQ + AVNT+ R ++ G NTD E + +++
Sbjct: 64 GFNITIPHKQAIIPLLSEVSAAAQLVGAVNTVWR--TEAGWCGTNTDVEGFLAPLKEL-- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+R + T ++ G GGA RA+ G G
Sbjct: 120 DRDWTQVTP-----------IILGNGGAARAVVVGCAEIG 148
>gi|402571542|ref|YP_006620885.1| shikimate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
gi|402252739|gb|AFQ43014.1| shikimate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
Length = 279
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
K F +I P+ HS P +HN + + N Y V++ L++ + FAG++V
Sbjct: 3 KQFAVIGNPIKHSLSPAMHNAGYETLGINAEYQRFRVEEHCLEEAVKGLRALGFAGWNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KEA++ F D + P A+ AVNT+ + +G+LIG+NTD + + ++E+ + RG K
Sbjct: 63 LPHKEAIVSFMDTLTPEAEKAGAVNTV--KNQNGRLIGHNTDGKGFVRSVENDL--RGLK 118
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
G+ VL GAGGA + +A +G + I +
Sbjct: 119 -----------GKKAVLLGAGGASKGIAMALAQQGMNLHILN 149
>gi|417938182|ref|ZP_12581480.1| shikimate dehydrogenase [Streptococcus infantis SK970]
gi|343391272|gb|EGV03847.1| shikimate dehydrogenase [Streptococcus infantis SK970]
Length = 284
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 19/152 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ V DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVGAIDLAETVANIRRYQMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+G+ SF ++G+ VL GAGGA +A+
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAI 137
>gi|193083955|gb|ACF09632.1| shikimate 5-dehydrogenase [uncultured marine crenarchaeote
AD1000-325-A12]
Length = 278
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 17/161 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
++F L+ V +S P++HN F + + +G Y+P+ V +L+ + +F G +V
Sbjct: 6 NRLFCLLGDKVDNSLSPVIHNSFFNYYDISGFYIPLNVSQSNLEDIVLLLNKLNFQGANV 65
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++KF D + P+A+ I AVNTI+R+ + KLIGYNTD + ++ I
Sbjct: 66 TIPHKENIIKFLDVLDPVAKQIHAVNTILRK--NDKLIGYNTDIGGFLEPLDRKI----- 118
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
S L + ++ GAGGA +A+ ++ + ++
Sbjct: 119 --------SSLNDKKILILGAGGAAKAVFRALVTKNCKEIV 151
>gi|255720691|ref|XP_002545280.1| pentafunctional polypeptide AROM [Candida tropicalis MYA-3404]
gi|327507656|sp|C5M1X2.1|ARO1_CANTT RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|240135769|gb|EER35322.1| pentafunctional polypeptide AROM [Candida tropicalis MYA-3404]
Length = 1551
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 168/374 (44%), Gaps = 35/374 (9%)
Query: 34 AEGADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLE- 89
A GA+ VE+R+D + + +I LP++ R + GG + ++ + L
Sbjct: 1065 AVGAEAVELRVDLLKETSSSFIADQIAVIRKHIDLPIIYTVRTESQGGKFPDNKVEELRN 1124
Query: 90 ALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
L L LG ++D EL ++ ++ + TR I S N ++ +
Sbjct: 1125 LLLLGVKLGVAFIDVELTAPVEVI-EEIIIKKGYTRVIASYNDIAGKLGWSNVEWTNKYN 1183
Query: 150 Q--ATGADIIKLV---FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
Q + ADI+KL+ S+ D E+ +F+ + + P++A ++G +G +SQ+L+ F
Sbjct: 1184 QGVSINADIVKLIGRASSLQDNLEL-EVFRKQNTLK-PLLAVNLGSQGKLSQVLNTIFT- 1240
Query: 205 ALVYGSLKGTPVLGLPTVESLRQTY-KVEHINADTKVFGLISKPVGHSKGPILHNPTFRH 263
+ SL GL T++ + Q Y + + A K F +I P+ HS+ P LHN ++
Sbjct: 1241 PITQESLPNED--GLLTIKEINQIYFDIGGLTA--KKFWVIGSPIQHSRSPNLHNAAYKA 1296
Query: 264 VNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
+N + D + + + PDF G ++ P K +MK+ E+ AQ I AVNT
Sbjct: 1297 LNLPFTFDRFESTDADQVYKELINKPDFGGLAITMPLKLDIMKYATELSDAAQKIGAVNT 1356
Query: 323 IIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA-GAGGAGR 381
++ P +G +G NTD ++ A G P R+ L GAGG R
Sbjct: 1357 LV--PLEGGYLGDNTDWVGITSSFTRA-------------GVPPNPRVNGLVIGAGGTSR 1401
Query: 382 ALAFGAKSRGARVV 395
A + G +
Sbjct: 1402 AAIYALHQIGCEKI 1415
>gi|225849265|ref|YP_002729429.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643114|gb|ACN98164.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 280
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ TKV+G+ PV HSK P F H+ N +YVP V +DL+K + A
Sbjct: 3 LDGQTKVYGIFGYPVKHSKSPTFQTAAFLHLGINAVYVPFEVNPNDLEKAVESLKVLKIA 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+KE V+ + +E+ + I A NTI + DG LI YNTD
Sbjct: 63 GVNITIPHKENVINYVNELSEEVKIIKAANTI--KNIDGYLIAYNTDW------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
G+ G L + ++ GAGG+ RA+ +G
Sbjct: 109 -IGFVEGLKELEPNLEDKRVLVIGAGGSSRAVVYG 142
>gi|339641659|ref|ZP_08663103.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339454928|gb|EGP67543.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 285
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ G+I+KP+ HS P +HN + N N +Y+ + VD DL K
Sbjct: 3 IDGHTRLAGVIAKPIKHSISPFIHNMAYHLTNTNAVYLALEVDSKDLGKAVENIKLYHML 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYK V++F DE+ A+ I AVNTII R G LIGYNTD ++ D
Sbjct: 63 GANVSMPYKSEVIQFLDELDESAREIGAVNTIINR--HGCLIGYNTDGVGFFKSLPDF-- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF 397
L G+ + GAGG A+ A G RV +F
Sbjct: 119 -------------NLKGKNLTILGAGGGASAIISQAVKEGVKRVFVF 152
>gi|260892556|ref|YP_003238653.1| shikimate 5-dehydrogenase [Ammonifex degensii KC4]
gi|260864697|gb|ACX51803.1| shikimate 5-dehydrogenase [Ammonifex degensii KC4]
Length = 297
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ +T++ G+ P+ H+ P +HN FR +N N IYVP +V ++L + + + +
Sbjct: 2 QIDGNTRIVGIFGDPIAHTLSPHMHNAAFRALNLNYIYVPFWVRREELAEATAAIRALNL 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
AG +V P+KEA++ + DE+ A I AVNT++ + GKL G NTD + A+++
Sbjct: 62 AGVNVTVPHKEAIIPYLDELEEEACLIGAVNTVVNQ--GGKLWGSNTDASGFLAALQE 117
>gi|312127119|ref|YP_003991993.1| shikimate 5-dehydrogenase [Caldicellulosiruptor hydrothermalis 108]
gi|311777138|gb|ADQ06624.1| shikimate 5-dehydrogenase [Caldicellulosiruptor hydrothermalis 108]
Length = 281
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFS-TYSSPDFAGFS 294
K+F LI K + HS P +HN + + IY + + D LK+F D GF+
Sbjct: 3 KLF-LIGKSLKHSISPFIHNTILSEFDIDAIYSNLELSDTEKLKEFVEMVRKDKDVVGFN 61
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
+ PYKE +++FCDEV + I A NT+ + DGK + YNTD G
Sbjct: 62 ITIPYKEDILEFCDEVSEDVRIIKAANTV--KKEDGKFLAYNTDW-------------IG 106
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+K G + + ++ G+GGA +A +G GA+ V
Sbjct: 107 FKKSLEDRGGDVKDKKILILGSGGAAKACIYGLYRMGAKEV 147
>gi|374299531|ref|YP_005051170.1| shikimate dehydrogenase [Desulfovibrio africanus str. Walvis Bay]
gi|332552467|gb|EGJ49511.1| Shikimate dehydrogenase [Desulfovibrio africanus str. Walvis Bay]
Length = 305
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
G+I P+GHS P+LHN FR V G Y+ PM + L F + + G SV P+
Sbjct: 41 GIIGNPLGHSLSPVLHNWAFREVGVAGTYMAWPMAPESLDDFMAAVLTLPIWGVSVTIPH 100
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
K +MKFC+E+ +A AVNT+ + G L G NTD + + + E G K +
Sbjct: 101 KTGIMKFCEELSGRCRAAGAVNTLHWK--KGLLCGENTDVQGFLA----PLAEIGIKPAS 154
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
A ++ GAGGA RA+ G + G R +
Sbjct: 155 A-----------LILGAGGAARAVIAGLREWGVRSI 179
>gi|390935057|ref|YP_006392562.1| shikimate dehydrogenase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570558|gb|AFK86963.1| Shikimate dehydrogenase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 283
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 8/123 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN+ T +FG+I P+GHS P++HN F ++++N +YV V +DLK +
Sbjct: 3 INSKTGIFGIIGHPIGHSLSPLIHNNAFENLDFNSVYVSFDVKQEDLKDAIMGVKALGIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE+V+K+ D + A+ I AVNTI R + G L GYNTD +T +++K
Sbjct: 63 GLNVTVPHKESVIKYLDRISDEAKLIGAVNTI--RNNAGLLEGYNTD----VTGFMESLK 116
Query: 352 ERG 354
E
Sbjct: 117 EHN 119
>gi|78043133|ref|YP_359479.1| shikimate 5-dehydrogenase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123576787|sp|Q3AEF5.1|AROE_CARHZ RecName: Full=Shikimate dehydrogenase
gi|77995248|gb|ABB14147.1| shikimate 5-dehydrogenase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 280
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN +TK+ G+I P+ H+ P +HN F+ +N N +Y+P+ V + L + + +F
Sbjct: 2 RINGETKLTGIIGYPLKHTLSPQMHNEAFKALNLNFLYLPLEVAEESLPQAIYGLKAFNF 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G +V PYKE V F DEV A+ I AVNTI+ G+LIGYNTD + ++++
Sbjct: 62 RGINVTIPYKEKVFPFLDEVATEAKTIGAVNTIVH--DRGRLIGYNTDAPGFLLSLKE 117
>gi|260881130|ref|ZP_05893311.1| shikimate dehydrogenase [Mitsuokella multacida DSM 20544]
gi|260849607|gb|EEX69614.1| shikimate dehydrogenase [Mitsuokella multacida DSM 20544]
Length = 293
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 17/155 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I TK G++ P+ HS P+L N + +Y+ P+ + LK+ + + F+
Sbjct: 8 IKGTTKNLGVMGWPIAHSLSPVLQNAAIEEAGLDYVYISLPVPPEKLKEAVAGLRAMQFS 67
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G++V P+K+A+M D V A+ I AVNT++ R DG L GYNTDC
Sbjct: 68 GWNVTIPHKQAIMAELDVVDEDARIIGAVNTVVNR--DGHLTGYNTDC------------ 113
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
G+ A G G+ L GAGGA RA+ +G
Sbjct: 114 -IGFMQPLAQQGFSPKGKAATLLGAGGAARAVIWG 147
>gi|383753808|ref|YP_005432711.1| putative shikimate dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365860|dbj|BAL82688.1| putative shikimate dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 283
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRH--VNYNGIYVPMFVDDLKKFFSTYSSPDFA 291
I T+ G+I P+ HS P+L N ++YN +P+ + L + + + +
Sbjct: 2 ITGKTQNLGVIGWPIAHSLSPVLQNAAIEKAGIDYNYTALPVAPEKLAEAVTGLKALHYR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G++V P+K A+M DE+ A+ I AVNT++ +GKL G+NTDC
Sbjct: 62 GWNVTIPHKTAIMPLLDEIDEDARIIGAVNTVVN--DNGKLKGFNTDC------------ 107
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI 399
G+ + + G+ VL GAGGA RA+ +G A+ V+ +
Sbjct: 108 -LGFMGALTKRQAAIKGKKVVLLGAGGAARAVIWGLIKAEAQEVVLGV 154
>gi|315637037|ref|ZP_07892260.1| shikimate dehydrogenase [Arcobacter butzleri JV22]
gi|315478573|gb|EFU69283.1| shikimate dehydrogenase [Arcobacter butzleri JV22]
Length = 264
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
F + PV HSK P + N H+NYNGIY ++D K T+ ++G ++ P+K
Sbjct: 4 FVIFGNPVVHSKSPQMQNAGLNHINYNGIYEKHHLEDGSKIKETFLRNGYSGANITVPHK 63
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E D V LAQ I AVNT + DGK+ YNTD + AIE
Sbjct: 64 EVAFINADIVKGLAQKIKAVNT--YKLVDGKIEAYNTDAPGFLKAIE------------- 108
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
SFG + +L GAGG +A+A + + +V + +
Sbjct: 109 SFGEV---KNVLLLGAGGTAKAIAIALQEKNIKVTVLN 143
>gi|395225305|ref|ZP_10403832.1| shikimate 5-dehydrogenase [Thiovulum sp. ES]
gi|394446552|gb|EJF07373.1| shikimate 5-dehydrogenase [Thiovulum sp. ES]
Length = 261
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
K+F + PV HSK P++HN F+ + Y+ ++D K + + +G SV P
Sbjct: 2 KLFTIFGNPVSHSKSPLIHNSVFKKYALDHRYIRTAIEDGKTIPDVMKNLNISGASVTVP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE + CDEV +A+ I AVN ++R GK+IGYNTD + I +I D E+
Sbjct: 62 HKEVAFQICDEVQGVARDIGAVNCLVRNNC-GKIIGYNTDGDGFIHSIRDWKFEK----- 115
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
++ GAGG +A+ ++G + V
Sbjct: 116 ------------ILIVGAGGTAKAIVHSFINQGFKNV 140
>gi|307594363|ref|YP_003900680.1| shikimate 5-dehydrogenase [Vulcanisaeta distributa DSM 14429]
gi|307549564|gb|ADN49629.1| shikimate 5-dehydrogenase [Vulcanisaeta distributa DSM 14429]
Length = 269
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 88/162 (54%), Gaps = 19/162 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD-DLKKFFSTYSSPDFAGFSVGF 297
+V+ +I P+ ++ P +HN FR + + +YVP+ V D F ++ +GF+V
Sbjct: 2 QVYAVIGYPLDYTLSPNIHNYVFRELGVDAVYVPLKVSPDRLGSFVDFARDSLSGFNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+++ D V A+ + +VNT++ R G+L+GYNTD AI+ A+ +RGY
Sbjct: 62 PHKVAIVRLIDGVVGPARELGSVNTVVNR--GGELLGYNTD----YIAIKQALSDRGYSG 115
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD 398
G A ++ GAGG RA+A + G +RV + +
Sbjct: 116 GDA-----------LIIGAGGVARAVALALRDLGCSRVYVMN 146
>gi|385839698|ref|YP_005877445.1| shikimate 5-dehydrogenase [Lactobacillus salivarius CECT 5713]
gi|300215389|gb|ADJ79802.1| Shikimate 5-dehydrogenase [Lactobacillus salivarius CECT 5713]
Length = 291
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 18/173 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
+E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L+K +
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
D G +V P K+ ++ + D++ P A+ AVNT++ +G L GY TD
Sbjct: 61 DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVN--DNGVLTGYTTDG--------- 109
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID 400
G+ A G + G+ LAGAGGAG +A A G + + IF++D
Sbjct: 110 ----TGFMKSLADEGLDIRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLD 158
>gi|169597317|ref|XP_001792082.1| hypothetical protein SNOG_01444 [Phaeosphaeria nodorum SN15]
gi|327507747|sp|Q0V3H0.2|ARO1_PHANO RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|160707495|gb|EAT91093.2| hypothetical protein SNOG_01444 [Phaeosphaeria nodorum SN15]
Length = 1661
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 139/327 (42%), Gaps = 27/327 (8%)
Query: 36 GADVVEIRLDCINNFQPGK----------DLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
GAD VE+R+D + + + + L I+ +PV+ R K GG + + +
Sbjct: 1083 GADAVELRVDLLEDPEGSEGLPTPEFVIEQLTILRNVTTIPVIFTLRTKAQGGKFPDEAY 1142
Query: 86 KRLEALHL-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+L+ A LG ++VD E+ + +L ++ S + T I S + S + +
Sbjct: 1143 AEARSLYQSAIRLGCEFVDLEMTMPEEVL-REVSETRGFTEIIASHHDPKGELSWTNGSW 1201
Query: 145 LVSRMQATG-ADIIKLVFSVNDITEIARIFQLLSHCQV----PIIAYSVGERGLVSQLLS 199
+ +A +IKLV + + + + S + P+IA ++GE G +S++L+
Sbjct: 1202 MKYYNRALQYGTVIKLVGVAKSLQDNFALAEFKSWAETAHPTPLIAINMGEHGKLSRILN 1261
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNP 259
F + + L G + +R+ + TK F + P+ S P LHN
Sbjct: 1262 -GFMAPVSHPLLPSATAPGQLSAADIRRGLSLMG-EIPTKKFCIFGSPISQSPSPRLHNR 1319
Query: 260 TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAA 319
FR Y D +PDF G SV P K+ V D V P +AI A
Sbjct: 1320 LFRETGLPHTYGLHETTDASSIRDIIRAPDFGGASVTIPLKQDVRPLIDGVGPEVEAIGA 1379
Query: 320 VNTIIRR----PSDGK----LIGYNTD 338
+NTI+ S GK LIG NTD
Sbjct: 1380 LNTIVPEVSIDESTGKEITRLIGRNTD 1406
>gi|322420004|ref|YP_004199227.1| shikimate 5-dehydrogenase [Geobacter sp. M18]
gi|320126391|gb|ADW13951.1| shikimate 5-dehydrogenase [Geobacter sp. M18]
Length = 290
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T V G+I PV HS P+LHN F+ + + IYVP + + L + + A
Sbjct: 3 ITGKTTVTGIIGWPVSHSLSPVLHNAAFKALGLDWIYVPFPIAPERLAEGICGLKAIGVA 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K A++ DEV P A+ I AVNT++ + G+L GYNTD I A+
Sbjct: 63 GFSVTIPHKVAIIPLLDEVTPEAELIGAVNTVVAK--HGRLTGYNTDGIGLIAAL----- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
A G+ ++ GAGGA R+ GA V
Sbjct: 116 -------AAKLDCDPKGKSVLVLGAGGAARSAVVSLAGAGAARV 152
>gi|310640411|ref|YP_003945169.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|386039559|ref|YP_005958513.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
gi|309245361|gb|ADO54928.1| Shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|343095597|emb|CCC83806.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
Length = 296
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ GL++ P+GHS P +HN F + N Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGMRALNI 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G++V P K A++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTAILQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF 397
GY G L G+ L G+GGA +A A G A + IF
Sbjct: 114 ---GYVRNLQEHGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIF 158
>gi|90962767|ref|YP_536682.1| shikimate 5-dehydrogenase [Lactobacillus salivarius UCC118]
gi|301300360|ref|ZP_07206564.1| shikimate dehydrogenase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90821961|gb|ABE00599.1| Shikimate 5-dehydrogenase [Lactobacillus salivarius UCC118]
gi|300852044|gb|EFK79724.1| shikimate dehydrogenase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 291
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 18/173 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
+E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L+K +
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
D G +V P K+ ++ + D++ P A+ AVNT++ +G L GY TD
Sbjct: 61 DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVN--DNGVLTGYTTDG--------- 109
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID 400
G+ A G + G+ LAGAGGAG +A A G + + IF++D
Sbjct: 110 ----TGFMKSLADEGLDIRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLD 158
>gi|403172838|ref|XP_003331976.2| hypothetical protein PGTG_13928 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170018|gb|EFP87557.2| hypothetical protein PGTG_13928 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1620
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 173/426 (40%), Gaps = 52/426 (12%)
Query: 6 ITKNTTMICA--PLMAQSVEQ--VLSNMYQAKAEGADVVEIRLDCINNFQPG-------- 53
+ +NT +C P ++ E+ + + ++ G D VE+R+D ++
Sbjct: 1059 VPRNTHFLCLTFPSLSPCREEDKNILDRFEELTVGCDAVELRVDLLSTSGKAPTSPSIPP 1118
Query: 54 -----KDLEIILTKKPLPVLIVYRPKWAGGLY-EGDEHKRLEALHLAEDLGADYVDFELK 107
K + + LP++ R GG++ +G + + + G +YVD EL
Sbjct: 1119 TEFVVKQVAALRRLTTLPIIYTVRTCSQGGMFPDGQPEEWCKLAAMGFRTGCEYVDIELG 1178
Query: 108 VASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA--DIIKLVFSVND 165
++ ++ Q G I++ D + D ++ R A D++KLV D
Sbjct: 1179 LSPE--QQKALCSQKGHSKIIASYHDFSGRLKWDSSEMIQRYHELKAYGDMVKLVSRAAD 1236
Query: 166 -------ITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLG 218
+ E + L + +I ++G G +S++LSP +
Sbjct: 1237 GLEDNLAMLEFRKKHATLQKDRQSLITINMGRSGQMSRILSPVLSPTT---HPLLPGPPA 1293
Query: 219 LPTVESLRQTYKVEHINADT--KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMF-- 274
P S RQ + + K F L P+G S+ P++H F + G
Sbjct: 1294 APGQLSFRQIQTAQGLLGQIIPKQFWLFGAPIGQSRSPLIHGTGFDTLGLEGYRYQKCET 1353
Query: 275 --VDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII---RRPSD 329
V D ++S DF G SV P K ++K+ D++ P AQA+ AVNTI+ +R
Sbjct: 1354 SSVTDSTVLEKIHAS-DFGGASVTIPLKVEIIKYLDQLTPDAQAVGAVNTIVPVSQRNGK 1412
Query: 330 GKLIGYNTDCEASITAIEDAIKERGYKNGTASFG----SPLAGRMFVLAGAGGAGRALAF 385
KL+G NTD EA T IE + + + G S L V+ GAGG RA +
Sbjct: 1413 IKLLGANTDWEAIKTKIEANLPAQ------QALGLITPSQLVRAAGVVIGAGGTARAAVY 1466
Query: 386 GAKSRG 391
S G
Sbjct: 1467 ALHSLG 1472
>gi|427736701|ref|YP_007056245.1| shikimate dehydrogenase [Rivularia sp. PCC 7116]
gi|427371742|gb|AFY55698.1| shikimate dehydrogenase [Rivularia sp. PCC 7116]
Length = 290
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I +TK+ G+I PV HS P++HN + + +Y+P ++ +L +++
Sbjct: 2 ITGNTKLLGVIGHPVEHSLSPLMHNAALEKLRLDYVYLPFPIEPQNLATALDGFAAIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+ P+K+A++ + P+A+A+ AVNT++R+ D K IG NTD E I ++ +
Sbjct: 62 GFNATIPHKQAIVPKLSNIEPIARAVGAVNTVVRK--DDKWIGTNTDVEGFIAPLQSLDR 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ N ++ G GGA RA+ G G
Sbjct: 120 DWSQTNA-------------LVLGNGGAARAVVAGCTQLG 146
>gi|384155734|ref|YP_005538549.1| shikimate 5-dehydrogenase [Arcobacter butzleri ED-1]
gi|345469288|dbj|BAK70739.1| shikimate 5-dehydrogenase [Arcobacter butzleri ED-1]
Length = 263
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
F + PV HSK P + N H+NYNGIY ++D K T+ ++G ++ P+K
Sbjct: 4 FVIFGNPVVHSKSPQMQNAGLNHINYNGIYEKHHLEDGTKIKETFLRNGYSGANITVPHK 63
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E D V LAQ I AVNT + DGK+ YNTD + AIE
Sbjct: 64 EVAFINADIVKGLAQKIKAVNT--YKLVDGKIEAYNTDAPGFLKAIE------------- 108
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
SFG + +L GAGG +A+A + + +V + +
Sbjct: 109 SFGEV---KNVLLLGAGGTAKAIAIALQEKNIKVTVLN 143
>gi|392426608|ref|YP_006467602.1| shikimate dehydrogenase [Desulfosporosinus acidiphilus SJ4]
gi|391356571|gb|AFM42270.1| shikimate dehydrogenase [Desulfosporosinus acidiphilus SJ4]
Length = 279
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVG 296
K F +I P+ HS P +HN ++H+ + IY ++ + L + + FAG++V
Sbjct: 3 KHFAVIGNPIEHSFSPAMHNAGYKHLGIDAIYHRFQVYPNSLAEAVYGLCALGFAGWNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++ + D + P A+ AVNT+ + DGK IG+NTD + I +IE +KE ++
Sbjct: 63 LPHKETIIPYLDTLTPQARRAGAVNTV--KILDGKKIGHNTDGDGFICSIEGELKE--FR 118
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
+ A VL GAGGA + +A +G V I +
Sbjct: 119 DKKA-----------VLLGAGGASKGIALALAEKGMHVHILN 149
>gi|227891979|ref|ZP_04009784.1| shikimate 5-dehydrogenase [Lactobacillus salivarius ATCC 11741]
gi|227866183|gb|EEJ73604.1| shikimate 5-dehydrogenase [Lactobacillus salivarius ATCC 11741]
Length = 291
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 18/173 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
+E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L+K +
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
D G +V P K+ ++ + D++ P A+ AVNT++ +G L GY TD
Sbjct: 61 DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVN--DNGVLTGYTTDG--------- 109
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID 400
G+ A G + G+ LAGAGGAG +A A G + + IF++D
Sbjct: 110 ----TGFMKSLADEGLDIRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLD 158
>gi|87123368|ref|ZP_01079219.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. RS9917]
gi|86169088|gb|EAQ70344.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. RS9917]
Length = 306
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 228 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTY 285
T K NA T + GL+ PV HS P++HN + N I++ P +DL+
Sbjct: 6 TAKPTTANAQTALVGLLGDPVHHSLSPVMHNAALEAMGLNWIFLALPTPANDLETVVRGL 65
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
+ G +V P+K +V+ C E+ PLAQ + AVN ++ R DG G NTD E I
Sbjct: 66 RAVGCRGLNVTIPHKHSVVPLCAELSPLAQRLGAVNALVPR-VDGGWFGTNTDVEGFIAP 124
Query: 346 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ +A + GR ++ G GG+ RA+ S G
Sbjct: 125 LREAQSD-------------WQGRRALVLGCGGSARAIVAAITSLG 157
>gi|424935106|ref|ZP_18353478.1| Shikimate dehydrogenase 2 [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|407809293|gb|EKF80544.1| Shikimate dehydrogenase 2 [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
Length = 292
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 225 LRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFF 282
+R E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK
Sbjct: 1 MRIFVMAERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVV 60
Query: 283 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 342
+ + GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD
Sbjct: 61 QGFRAMKLRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGY 118
Query: 343 ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ A+ +A G + G+ + GAGGA AL A G + +
Sbjct: 119 MRALSEA-------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAI 158
>gi|386285382|ref|ZP_10062597.1| shikimate 5-dehydrogenase [Sulfurovum sp. AR]
gi|385343493|gb|EIF50214.1| shikimate 5-dehydrogenase [Sulfurovum sp. AR]
Length = 264
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 18/160 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
++F + PV HSK P++HN +F+ + ++G Y +++ + T+ S G ++ P
Sbjct: 3 QLFAIFGNPVSHSKSPLMHNLSFQGLKFDGCYTRYLLEEGSRLKETFFSLGLKGINITVP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE CD + P AQ + AVNTI+ + +GKL GYNTD + AI + ++N
Sbjct: 63 HKEHAYAACDVLDPFAQKVGAVNTIVEK--EGKLYGYNTDAPGFLKAISE------FEN- 113
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
+ + GAGG ++ + K G V I +
Sbjct: 114 ---------VKTVLFLGAGGTAKSTSIILKEAGYEVTILN 144
>gi|87301533|ref|ZP_01084373.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. WH 5701]
gi|87283750|gb|EAQ75704.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. WH 5701]
Length = 312
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 290
I+A T + ++ P+ HS P +HN R + + +Y+ P+ +DL + D
Sbjct: 4 EISAHTSLVAVLGDPIRHSLSPAMHNAALRQLGLDWVYLALPVQANDLAVVVRALEAIDC 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+K AV + E+ PLA+ + AVNT++RR G L G NTD E + +
Sbjct: 64 RGLNVTLPHKRAVAELAAELTPLARRVGAVNTLVRREGGGWL-GTNTDVEGFLAPL---- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
RG N LAG ++ G GG+ RA+
Sbjct: 119 --RGIANAEGVSVPDLAGGRALVLGCGGSARAV 149
>gi|402309392|ref|ZP_10828385.1| shikimate dehydrogenase [Eubacterium sp. AS15]
gi|400372359|gb|EJP25303.1| shikimate dehydrogenase [Eubacterium sp. AS15]
Length = 288
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I T++ GLI P+ HS+ P +HN F + Y+ + V + LK+ +
Sbjct: 4 RIQGTTRLIGLIGTPIKHSRSPHMHNSAFEKTGQDYAYLCLEVGKEGLKQALDALKLFNA 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ FP K+ V+++ DE+ A+ I +VNTI K+ GYNTD + +IE+
Sbjct: 64 KGSNITFPNKQEVIQYLDEISEDAKIIGSVNTITIDDETKKIKGYNTDGRGFVASIEE-- 121
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID 400
++ YK G VL G GGAGRA+A G ++I DID
Sbjct: 122 RKIDYK-----------GNKVVLLGVGGAGRAIAIQLAYEGVGELIIKDID 161
>gi|308067676|ref|YP_003869281.1| shikimate dehydrogenase [Paenibacillus polymyxa E681]
gi|305856955|gb|ADM68743.1| Shikimate dehydrogenase [Paenibacillus polymyxa E681]
Length = 296
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ GL++ P+GHS P +HN F + N +Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNVYMAFEVGNEQLEEVVRGMRALNI 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G++V P K ++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTTILQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF 397
GY G L G+ L G+GGA +A A G A + IF
Sbjct: 114 ---GYVRNLREHGIGLKGKKMTLVGSGGAATPIAIEAAQAGLAEISIF 158
>gi|410460448|ref|ZP_11314126.1| shikimate 5-dehydrogenase [Bacillus azotoformans LMG 9581]
gi|409927063|gb|EKN64209.1| shikimate 5-dehydrogenase [Bacillus azotoformans LMG 9581]
Length = 279
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGL+ PVGHS PI+HN F + + Y V ++L+ + + +GF+V
Sbjct: 3 KLFGLLGHPVGHSMSPIMHNDQFSFLGLDCYYHAFDVHPNELENAVNGIKALGLSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +MK+ DE+ A I AVNT++ R DGKL GYNTD + +++
Sbjct: 63 IPHKVEIMKYLDEIDEEALQIGAVNTVVNR--DGKLYGYNTDGKGFAVSLQTIA------ 114
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G+ + ++ GAGGA R + GA +
Sbjct: 115 ------GADFLNKKMLIVGAGGAARGVFVTLARMGANAI 147
>gi|284161990|ref|YP_003400613.1| shikimate 5-dehydrogenase [Archaeoglobus profundus DSM 5631]
gi|284011987|gb|ADB57940.1| shikimate 5-dehydrogenase [Archaeoglobus profundus DSM 5631]
Length = 271
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
FG+I P+GHS PI+HN FR +N + IY+P V ++LK + F G +V P
Sbjct: 4 FGVIGHPIGHSASPIMHNTVFRTLNIDAIYLPFDVKPENLKDAVYGARALGFKGLNVTIP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE + K+ V LA+ I AVNT+ KL GYNTD ++ +E
Sbjct: 64 HKEEITKYVKPVG-LAERIGAVNTV----DVPKLEGYNTDAIGALRTLE----------- 107
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
++ G++ ++ GAGG RA+AF + ++
Sbjct: 108 --AYNVDYEGKVVLIVGAGGVARAIAFALAGKSTLII 142
>gi|206580594|ref|YP_002240458.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae 342]
gi|288937158|ref|YP_003441217.1| shikimate 5-dehydrogenase [Klebsiella variicola At-22]
gi|290512580|ref|ZP_06551946.1| shikimate 5-dehydrogenase [Klebsiella sp. 1_1_55]
gi|206569652|gb|ACI11428.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae 342]
gi|288891867|gb|ADC60185.1| shikimate 5-dehydrogenase [Klebsiella variicola At-22]
gi|289774921|gb|EFD82923.1| shikimate 5-dehydrogenase [Klebsiella sp. 1_1_55]
Length = 287
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFD 398
G + G+ + GAGGA AL A G + + IF+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFN 157
>gi|409043576|gb|EKM53058.1| hypothetical protein PHACADRAFT_210784 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1377
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 163/394 (41%), Gaps = 69/394 (17%)
Query: 36 GADVVEIRLDCI------NNFQP--------GKDLEIILTKKPLPVLIVYRPKWAGGLY- 80
G D VE+R+D + +F+P + + + K LP++ R GG +
Sbjct: 868 GVDAVEVRVDLLRSPVDTESFEPYIPPTAYVCEQIAALRQKTNLPIVFTCRTVSQGGSFP 927
Query: 81 EGDEHKRLEALHLAEDLGADYVDFEL----KVASNILGKQYSSHQSGTRFIVSCNLDCET 136
+ E + + H A LG +Y+D EL K ++ ++ SS + S N T
Sbjct: 928 DTAEKQAFDLFHAALRLGVEYIDVELTWSKKQIDALVQRKGSSQIIASYHDWSGNFKWGT 987
Query: 137 PSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSH-----CQVPIIAYSVGER 191
+D+ R A G DI+K+V N+ + +++ + PIIA ++G
Sbjct: 988 AQSKDV---YDRAAAFG-DIVKIVGKANNFEDNFSLYRFVEERTKADGSKPIIAINMGVE 1043
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVLG--LPTVESLRQTYKVEHINA-------DTKVFG 242
G S++L+ F +PV LP+ + Q V+ NA +K F
Sbjct: 1044 GQTSRILNKTF-----------SPVTHPLLPSKAAPGQLSFVQIQNALNLLGLLPSKRFF 1092
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDL-KKFFSTYSSPDFAGFSVGFPYKE 301
L P+ S P +HN + + Y + + + ++ + + P+F G SV PYK
Sbjct: 1093 LFGNPISQSMSPTIHNTAHEILGFPHKYELLETETVGEEIKAAVTLPEFGGASVTIPYKL 1152
Query: 302 AVMKFCDEVHPLAQAIAAVNTII---RRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
V+ D + P A+A+ AVNTI+ R L G NTD I +
Sbjct: 1153 DVIPLLDTLSPHAEAVGAVNTIVPIKREDGSTVLHGENTDWVGMRECIVSHL-------- 1204
Query: 359 TASFGSPLAGRMF---VLAGAGGAGRALAFGAKS 389
P+ GR ++ GAGG RA + KS
Sbjct: 1205 ------PVTGRSIEAALVIGAGGTSRAAIYALKS 1232
>gi|419761794|ref|ZP_14288045.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397745335|gb|EJK92542.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 287
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + G+ + GAGGA AL A G + +
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAI 153
>gi|405118432|gb|AFR93206.1| arom polypeptide [Cryptococcus neoformans var. grubii H99]
Length = 1611
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 156/381 (40%), Gaps = 51/381 (13%)
Query: 35 EGADVVEIRLDCINN--FQP-----------GKDLEIILTKKPLPVLIVYRPKWAGGLYE 81
EGAD VE R+D +N P K L + LP++ R K GG+
Sbjct: 1111 EGADAVEFRIDLLNTTGHAPTSPASPPISFVAKQLASLRLATTLPIVFSVRSKDQGGMVP 1170
Query: 82 GDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEE 140
D + AL L +YVD E+ +L + T I S +
Sbjct: 1171 SDNAEAYGALVRLGLRCACEYVDLEVCWPEQLLDSIVQLKRE-THIIASWH-----DWTG 1224
Query: 141 DLGYLVSRMQATG------ADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVG 189
D+ + M+A D+ K+V + + A++ + Q P++A ++G
Sbjct: 1225 DMAWDGEEMKAKHVLCEKYGDVAKIVGTAKSGLDNAKLAIFVGEVQSHPGAKPLLAINMG 1284
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G +S++L+P + + +L G T + Q + + K F L P+
Sbjct: 1285 AAGQLSRVLNPILT-PVTHDALPSRAAPGQLTAREILQARALTG-SLPAKKFVLFGSPIA 1342
Query: 250 HSKGPILHNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
HS P+LHN F + NY G++ VD + SP+F G SV P K ++
Sbjct: 1343 HSVSPLLHNTGFATLGLPHNY-GLHESEKVD--QGVLEMIRSPEFGGASVTIPLKLDIIP 1399
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
D V A+ I AVNT+I P GKL G NTD +A A + + +G+++
Sbjct: 1400 HLDSVSEDAKIIGAVNTVI--PRGGKLYGENTDWQAIRQAAAQNLDDDVLSDGSST---- 1453
Query: 366 LAGRMFVLAGAGGAGRALAFG 386
++ GAGG RA +
Sbjct: 1454 -----ALVIGAGGTCRAAIYA 1469
>gi|297170988|gb|ADI22003.1| shikimate 5-dehydrogenase [uncultured myxobacterium HF0200_01L06]
Length = 274
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+A T + G++ P GH++ P +HN F + + Y+ V DDL+ S +
Sbjct: 5 ISATTALCGILLHPAGHTRSPAMHNAAFEALGIDASYLAFDVHPDDLEAALSGARALGVR 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
++ P+K AV+ DEV +AQAI AVNT+ G+ G NTD ++ A+E +
Sbjct: 65 QLAISLPHKIAVLDHLDEVDSVAQAIGAVNTVTF--DGGRARGTNTDWLGAVEALE---R 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
E +P+A + V+ GAGG R++ +G RGA V + +
Sbjct: 120 E-----------APIAQQHAVVLGAGGTARSVVYGLLQRGATVSVLN 155
>gi|83814489|ref|YP_446381.1| shikimate 5-dehydrogenase [Salinibacter ruber DSM 13855]
gi|294508318|ref|YP_003572376.1| shikimate 5-dehydrogenase [Salinibacter ruber M8]
gi|123528180|sp|Q2S0A0.1|AROE_SALRD RecName: Full=Shikimate dehydrogenase
gi|83755883|gb|ABC43996.1| shikimate 5-dehydrogenase [Salinibacter ruber DSM 13855]
gi|294344646|emb|CBH25424.1| shikimate 5-dehydrogenase [Salinibacter ruber M8]
Length = 285
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 81/155 (52%), Gaps = 16/155 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
++A T++ L+ PV HS P +HN FR + N YV P+ + L + + F
Sbjct: 3 LDATTQLVTLLGHPVEHSLSPRIHNTAFRAQDVNAAYVATPVRPEALGDAVAGLRALQFL 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAV+ DEV A+A+ AVNTI+R G+L G NTD + +E
Sbjct: 63 GANVTTPHKEAVLPVLDEVTERARAVGAVNTIVR--DGGRLHGDNTDIAGFLRPLE---- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
ERG G L G ++ GAGGA RA+ +G
Sbjct: 117 ERG--------GDALEGAPMLVFGAGGAARAVVYG 143
>gi|212638656|ref|YP_002315176.1| shikimate 5-dehydrogenase [Anoxybacillus flavithermus WK1]
gi|212560136|gb|ACJ33191.1| Shikimate 5-dehydrogenase [Anoxybacillus flavithermus WK1]
Length = 299
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
K+F LI PV HS P++HN F+ ++ + Y V+ LK+ + AGF+V
Sbjct: 26 KLFALIGCPVHHSLSPLMHNDAFQSLHIDAHYHAFHVEPHMLKEAVEGLKALQCAGFNVT 85
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AVM++ DE+ A+ + AVNT++ +GK +GYNTD E + A+ + +
Sbjct: 86 IPHKTAVMEYMDELDETAKQMGAVNTVVNE--NGKWVGYNTDGEGFVRALCEQMN----- 138
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAF 385
L+G ++ GAGGA R + F
Sbjct: 139 -------IELSGARILIIGAGGAARGIYF 160
>gi|365894088|ref|ZP_09432248.1| Shikimate dehydrogenase (modular protein) [Bradyrhizobium sp. STM
3843]
gi|365425153|emb|CCE04790.1| Shikimate dehydrogenase (modular protein) [Bradyrhizobium sp. STM
3843]
Length = 517
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 83/166 (50%), Gaps = 21/166 (12%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV-----DDLKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + Y + V + L+ FAG +V
Sbjct: 242 GLIGAPIKHSASPAMHEEAASALGLRCHYQLIEVAGADRERLRGLLDGVRQMGFAGVNVT 301
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
FPYKEAV++ DE+ P A+AI AVNT++ R +G+L+G+NTD A+ +
Sbjct: 302 FPYKEAVVELLDELAPEAKAIGAVNTVVVR--EGRLVGHNTDTTGFARAVAPLV------ 353
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDF 401
TAS P+A L GAGG G+A+AF S G + + I D D
Sbjct: 354 --TASGRGPVA-----LVGAGGVGKAIAFALASHGVSELRIMDSDL 392
>gi|152968656|ref|YP_001333765.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|262044888|ref|ZP_06017930.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012030|ref|ZP_08307247.1| shikimate dehydrogenase [Klebsiella sp. MS 92-3]
gi|365142635|ref|ZP_09347751.1| shikimate dehydrogenase [Klebsiella sp. 4_1_44FAA]
gi|378976949|ref|YP_005225090.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386033134|ref|YP_005953047.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae KCTC 2242]
gi|419973485|ref|ZP_14488909.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419980108|ref|ZP_14495395.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985021|ref|ZP_14500164.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419990105|ref|ZP_14505078.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995985|ref|ZP_14510789.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003092|ref|ZP_14517740.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420007859|ref|ZP_14522351.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420013830|ref|ZP_14528139.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420019141|ref|ZP_14533335.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024633|ref|ZP_14538645.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420031626|ref|ZP_14545446.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420037930|ref|ZP_14551581.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420042184|ref|ZP_14555678.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420048366|ref|ZP_14561680.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420053592|ref|ZP_14566769.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420059464|ref|ZP_14572471.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420065185|ref|ZP_14577992.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420073114|ref|ZP_14585744.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420075986|ref|ZP_14588460.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420084181|ref|ZP_14596446.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909952|ref|ZP_16339747.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421919298|ref|ZP_16348801.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424828935|ref|ZP_18253663.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425078403|ref|ZP_18481506.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425079840|ref|ZP_18482937.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|425089035|ref|ZP_18492128.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|425089958|ref|ZP_18493043.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428151081|ref|ZP_18998826.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428931502|ref|ZP_19005097.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae JHCK1]
gi|428938468|ref|ZP_19011595.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae VA360]
gi|449051289|ref|ZP_21731888.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae hvKP1]
gi|150953505|gb|ABR75535.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|259037615|gb|EEW38844.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534019|gb|EGF60671.1| shikimate dehydrogenase [Klebsiella sp. MS 92-3]
gi|339760262|gb|AEJ96482.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae KCTC 2242]
gi|363651417|gb|EHL90485.1| shikimate dehydrogenase [Klebsiella sp. 4_1_44FAA]
gi|364516360|gb|AEW59488.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397347024|gb|EJJ40134.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397348124|gb|EJJ41226.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397353005|gb|EJJ46082.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397366106|gb|EJJ58725.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397367720|gb|EJJ60329.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397370399|gb|EJJ62982.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397379152|gb|EJJ71350.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397383945|gb|EJJ76072.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397389307|gb|EJJ81249.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397398570|gb|EJJ90232.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397399773|gb|EJJ91423.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397404887|gb|EJJ96373.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397415554|gb|EJK06739.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397416833|gb|EJK08003.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397423820|gb|EJK14737.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397432272|gb|EJK22936.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397435462|gb|EJK26077.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438255|gb|EJK28767.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397447948|gb|EJK38133.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397450431|gb|EJK40536.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|405590264|gb|EKB63798.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405600173|gb|EKB73340.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405606765|gb|EKB79735.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405614522|gb|EKB87221.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|410116082|emb|CCM82372.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410118329|emb|CCM91426.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|414706351|emb|CCN28055.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426305696|gb|EKV67813.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae VA360]
gi|426308001|gb|EKV70072.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae JHCK1]
gi|427538900|emb|CCM94964.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|448876277|gb|EMB11271.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae hvKP1]
Length = 287
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + G+ + GAGGA AL A G + +
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAI 153
>gi|37522847|ref|NP_926224.1| shikimate 5-dehydrogenase [Gloeobacter violaceus PCC 7421]
gi|35213849|dbj|BAC91219.1| shikimate 5-dehydrogenase [Gloeobacter violaceus PCC 7421]
Length = 285
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 19/160 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ GL+ PVGHS P++HN + + +YVP+ V DL + + F
Sbjct: 7 IRGTTRLLGLLGYPVGHSLSPVMHNAALARLGLDLVYVPLPVAPADLPQAVAGLRRAGFV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+A++ D + P A+ AVNT +R +DG L G NTD E + IE
Sbjct: 67 GFNVTIPHKQAIVPLLDTLTPEAKGAGAVNT-VRVETDGSLTGTNTDIEGFMGPIETV-- 123
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
P G +L G GG+ A+A G G
Sbjct: 124 -------------PFQGAATIL-GCGGSALAVALGCAQLG 149
>gi|333910218|ref|YP_004483951.1| 3-dehydroquinate dehydratase [Methanotorris igneus Kol 5]
gi|333750807|gb|AEF95886.1| 3-dehydroquinate dehydratase [Methanotorris igneus Kol 5]
Length = 218
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 8/222 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ +++ L N +A E AD+VE R+D +++ E++ P +I
Sbjct: 1 MICIPIVDNNIDDALKNAEKALKE-ADIVEFRVDMLDDVNESAIEEMV----KYPCIITV 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI-LGKQYSSHQSGTRFIVSC 130
R W GG ++ +R+ + A + A +VD ELK N L K S T+ I+S
Sbjct: 56 RADWEGGFWKKSNDERINLIKKAIECNAKFVDIELKEEKNKELVKFRDEIGSKTKIIISY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TPS E+L +V G DI K ++ ++ +++ II ++GE
Sbjct: 116 HDFEKTPSCEELIKIVEEELKIG-DIAKFAVMAKSKEDVLKVLNVINKYNGKIIGIAMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL-GLPTVESLRQTYKV 231
G ++++L F L + S++G G V+ L++ +K+
Sbjct: 175 EGKLTRILGVHFGSILTFASMEGKASAPGQIDVKKLKEIWKL 216
>gi|325968944|ref|YP_004245136.1| shikimate dehydrogenase substrate binding domain protein
[Vulcanisaeta moutnovskia 768-28]
gi|323708147|gb|ADY01634.1| Shikimate dehydrogenase substrate binding domain protein
[Vulcanisaeta moutnovskia 768-28]
Length = 267
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 19/162 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLK-KFFSTYSSPDFAGFSVGF 297
+V+ +I P+ ++ P +HN F + + +YVP+ V + + F ++ +GF+V
Sbjct: 2 RVYAVIGYPLNYTLSPNIHNYVFSALGLDAVYVPLKVSPSRLRHFVEFARDSLSGFNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K ++++ D A+ + +VNT++ R DG+L+GYNTD AI A+ ERGY
Sbjct: 62 PHKVSIVQLIDGTTGPAKELGSVNTVVNR--DGELLGYNTD----YLAIRQALSERGYSG 115
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD 398
G A ++ GAGG RA A + G RV + +
Sbjct: 116 GDA-----------LIIGAGGVARATALALRDLGCTRVYVMN 146
>gi|451945875|ref|YP_007466470.1| 3-dehydroquinate dehydratase [Desulfocapsa sulfexigens DSM 10523]
gi|451905223|gb|AGF76817.1| 3-dehydroquinate dehydratase [Desulfocapsa sulfexigens DSM 10523]
Length = 229
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 116/228 (50%), Gaps = 11/228 (4%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
K+ + IC + S++ L+ + + A ADV+EIRLD ++ + + T P+
Sbjct: 2 KSHSRICVSIGRSSIDDALA-IADSVAAQADVLEIRLDFLHTPAVSPFVNTLRT----PL 56
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGK-QYSSHQSGTRF 126
L RP W GG + G E +R+ L A YVD EL + + + + +S T+
Sbjct: 57 LFTNRPDWEGGEFVGKEEQRIGPLLEAVTENCGYVDLELLAPDDSHQRMRMALQESRTKL 116
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPI 183
I+S + +TP+ E+L ++ MQ GADI K++ + + ++ R+ QL + P+
Sbjct: 117 ILSWHNFKDTPTREELVGRMALMQDKGADIGKIITTAHSHRDVLRVLQLQEVAEQLGFPL 176
Query: 184 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTY 229
IA+ +G G+VS++ + + G + Y S+ G +V SLR+ +
Sbjct: 177 IAFCMGRPGVVSRVATCELGGYMTYCSVSDDEATAPGQLSVGSLREIH 224
>gi|357038672|ref|ZP_09100469.1| Shikimate dehydrogenase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359464|gb|EHG07226.1| Shikimate dehydrogenase [Desulfotomaculum gibsoniae DSM 7213]
Length = 313
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 80/153 (52%), Gaps = 16/153 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ +T V+G+I PV HS P + N R + NG+YVP ++L + + +
Sbjct: 26 EIDGETLVYGIIGNPVSHSYSPAMQNAALRALGLNGVYVPFSPGRENLVQAVAGLRALGI 85
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AG +V PYKEAV+ + DE+ A AVNTI+ R G+L G+NTD I+D
Sbjct: 86 AGVNVTVPYKEAVIPYLDELTETAALYGAVNTIVNR--QGRLTGHNTDGPGF---IKDLR 140
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
K+ G+ P G VL GAGG+ RA+
Sbjct: 141 KDYGH--------DPSRGPALVL-GAGGSARAV 164
>gi|313682284|ref|YP_004060022.1| shikimate dehydrogenase [Sulfuricurvum kujiense DSM 16994]
gi|313155144|gb|ADR33822.1| shikimate dehydrogenase [Sulfuricurvum kujiense DSM 16994]
Length = 264
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
VF + PV HS+ P++HN F+ + + Y + + + + + +G +V P+
Sbjct: 3 VFTIFGDPVSHSRSPLMHNSVFKSLRIDACYTRTPLKEGSQLRDVFFAKALSGANVTVPH 62
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA CDEV +A+ I AVNT++ DGKLIGYNTD + G+ +
Sbjct: 63 KEAAYAQCDEVRGIARTIQAVNTLVLE--DGKLIGYNTDAD-------------GFMHAI 107
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
SFG A + ++ GAGG RAL+ G I +
Sbjct: 108 KSFG---AIKTALILGAGGTARALSVALSQGGITPTILN 143
>gi|390455054|ref|ZP_10240582.1| shikimate dehydrogenase [Paenibacillus peoriae KCTC 3763]
Length = 296
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ GL++ P+GHS P +HN F + N Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGLRALNI 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G++V P K A++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTAIVQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID 400
GY G L G+ L G+GGA +A A G A + IF D
Sbjct: 114 ---GYVRNLREHGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARD 161
>gi|374635880|ref|ZP_09707469.1| shikimate 5-dehydrogenase [Methanotorris formicicus Mc-S-70]
gi|373560842|gb|EHP87092.1| shikimate 5-dehydrogenase [Methanotorris formicicus Mc-S-70]
Length = 282
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA TK+ GL+ PV HS PI+HN FR N N +Y+ V ++L+ +
Sbjct: 2 INAKTKLIGLLGHPVEHSFSPIMHNAAFRDKNLNYVYLAFDVLPENLRYVIDGAKAMGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P+K +M++ DE+ A+ I AVNTI + + K IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMEYLDEIDENAKLIGAVNTI--KIENNKAIGYNTDGLGARMALEEEI 118
>gi|428768969|ref|YP_007160759.1| shikimate dehydrogenase [Cyanobacterium aponinum PCC 10605]
gi|428683248|gb|AFZ52715.1| shikimate dehydrogenase [Cyanobacterium aponinum PCC 10605]
Length = 287
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
I TK+ G+I P+ HS P+ N +N + IYVP V+ +L++ F+T+ +
Sbjct: 2 QITGKTKLLGIIGNPIEHSMSPVFQNSAIASLNLDYIYVPFAVEKENLQELFNTFKAVKI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P+KE V+ F D + A+ I AVNT+ + + G NTD + I+ ++
Sbjct: 62 RGFNVTIPHKENVLPFLDYITETAKIIGAVNTVWLT-ENNQWHGTNTDIDGFISPLKSL- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
++ + N T PL + G GGA RA+ G G R +
Sbjct: 120 -DKNWANIT-----PL------VLGNGGASRAVIVGCSELGCREI 152
>gi|389571866|ref|ZP_10161954.1| shikimate 5-dehydrogenase [Bacillus sp. M 2-6]
gi|388428352|gb|EIL86149.1| shikimate 5-dehydrogenase [Bacillus sp. M 2-6]
Length = 280
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 16/146 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I PVGHS P +HN + +G Y V DDLK S + +G +V
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAISGMKALGISGINVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K +MK+ D++ A+ + AVNT+ R +L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVEIMKYLDKIDVTAERLGAVNTV--RLEGDQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRAL 383
PL+ F+L GAGGA RA+
Sbjct: 117 -------PLSELSFLLLGAGGAARAI 135
>gi|392404471|ref|YP_006441083.1| shikimate dehydrogenase [Turneriella parva DSM 21527]
gi|390612425|gb|AFM13577.1| shikimate dehydrogenase [Turneriella parva DSM 21527]
Length = 312
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 14/153 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+A TKV+G+I P+ H+ P +HN F N +Y+ + +L + + + G
Sbjct: 3 IDAATKVYGIIGNPLSHTFSPAMHNAAFAARKINAVYLAFPLKNLIQLKYSMKQWNIQGL 62
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV PYK ++ + D + PLA I +VNT++ + G L GYNTD ++ A+ +
Sbjct: 63 SVTIPYKISIRRLLDRIDPLALQIGSVNTVVWGKT-GLLEGYNTDGPGAMMALRKS---- 117
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
L G+ ++ G+GG+ R++AF
Sbjct: 118 ---------QVSLKGKKILVIGSGGSARSIAFA 141
>gi|298490426|ref|YP_003720603.1| shikimate 5-dehydrogenase ['Nostoc azollae' 0708]
gi|298232344|gb|ADI63480.1| shikimate 5-dehydrogenase ['Nostoc azollae' 0708]
Length = 298
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ I TK+ G+I PV HS P++HN + + +Y+P + ++L+ + +++
Sbjct: 10 QQITGKTKLLGVIGHPVEHSLSPVMHNAALTKLGLDYVYLPFPIAPENLEIAIAGFAAIG 69
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G SV P+K+A++ E+ P+AQAI AVNT+ + K +G NTD E I ++
Sbjct: 70 VVGLSVTIPHKQAIIPILTEISPIAQAIGAVNTVTHQ--GNKWVGTNTDVEGFIAPLQ-- 125
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ + + V+ G GGA RA+ G G
Sbjct: 126 ----------TTYQQDWSHKRAVILGNGGAARAIVAGCVQLG 157
>gi|421076099|ref|ZP_15537101.1| Shikimate dehydrogenase [Pelosinus fermentans JBW45]
gi|392525958|gb|EIW49082.1| Shikimate dehydrogenase [Pelosinus fermentans JBW45]
Length = 281
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I + T+ G++ P+GHS PI+HN F+ ++ + +Y+P+ V ++L + + + +F
Sbjct: 2 ITSKTQKIGILGWPLGHSLSPIMHNAAFKSLHLDYVYIPLPVHPENLAQAVAGLKAMEFT 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI 346
G +V P+K +M + DE+ AQ + AVNT++ + DGK IGYNTD + + +I
Sbjct: 62 GVNVTIPHKVEIMSYLDEIDFSAQLVGAVNTVVIK--DGKSIGYNTDAQGFVQSI 114
>gi|159906101|ref|YP_001549763.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C6]
gi|238687001|sp|A9AB08.1|AROE_METM6 RecName: Full=Shikimate dehydrogenase
gi|159887594|gb|ABX02531.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C6]
Length = 279
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ TK+ GLI PV HS PI+HN + + N Y+ V ++LK S + A
Sbjct: 2 IDSKTKLIGLIGHPVEHSFSPIMHNAAIKDLGINYTYLAFDVSEENLKYIVSGAKALQIA 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ A++I AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKSIGAVNTV--KIENGKTIGYNTDGIGVKRALEE--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
K+G + ++ G+GGA RA++F
Sbjct: 117 ----KSGILIN------KNILIIGSGGASRAVSF 140
>gi|428226598|ref|YP_007110695.1| shikimate dehydrogenase [Geitlerinema sp. PCC 7407]
gi|427986499|gb|AFY67643.1| shikimate dehydrogenase [Geitlerinema sp. PCC 7407]
Length = 287
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ G++ PV HS PI+HN H+ + +Y+P+ V D+L K + +
Sbjct: 2 ITGSTRLLGVMGHPVEHSLSPIMHNAAIAHLGADFVYIPLPVAPDNLPKAIAGLEALGVR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A+M EV LAQAI AVNT+ P G NTD + +E
Sbjct: 62 GFNLTIPHKQAIMPMLAEVSDLAQAIGAVNTVWWTPQGWS--GTNTDVAGFLAPLE--AL 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
R +++ TA V+ G GGA RA+ G G +
Sbjct: 118 GRDWRSTTA-----------VVLGNGGAARAVVAGCGQLGCQ 148
>gi|331251280|ref|XP_003338239.1| hypothetical protein PGTG_19855 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309317229|gb|EFP93820.1| hypothetical protein PGTG_19855 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1560
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 174/426 (40%), Gaps = 52/426 (12%)
Query: 6 ITKNTTMICA--PLMAQSVEQVLSNM--YQAKAEGADVVEIRLDCINNFQPG-------- 53
+ +NT +C P ++ E+ +++ ++ G D VE+R+D ++
Sbjct: 999 VPRNTHFLCLTFPSLSPCREEDKTSLDRFEELTIGCDAVELRVDLLSTSGKAPTSPSIPP 1058
Query: 54 -----KDLEIILTKKPLPVLIVYRPKWAGGLY-EGDEHKRLEALHLAEDLGADYVDFELK 107
K + + LP++ R GG++ +G + + + G +YVD EL
Sbjct: 1059 TEFVVKQVAALRRLTTLPIIYTVRTCSQGGMFPDGQPEEWCKLAAMGFRTGCEYVDIELG 1118
Query: 108 VASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA--DIIKLVFSVND 165
++ ++ Q G I++ D + D ++ R A D++KLV D
Sbjct: 1119 LSPE--QQKALCSQKGHSKIIASYHDFSGRLKWDSSEMIQRYHELKAYGDMVKLVSRAAD 1176
Query: 166 -------ITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLG 218
+ E + L + +I ++G G +S++LSP +
Sbjct: 1177 GLEDNLAMLEFRKKHATLQKDRQSLITINMGRSGQMSRILSPVLSPTT---HPLLPGPPA 1233
Query: 219 LPTVESLRQTYKVEHINADT--KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMF-- 274
P S RQ + + K F L P+G S+ P++H F + G
Sbjct: 1234 APGQLSFRQIQTAQGLLGQIIPKQFWLFGAPIGQSRSPLIHGTGFDTLGLEGYRYQKCET 1293
Query: 275 --VDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII---RRPSD 329
V D ++S DF G SV P K ++K+ D++ P AQA+ AVNTI+ +R
Sbjct: 1294 SSVTDSTVLEKIHAS-DFGGASVTIPLKVEIIKYLDQLTPDAQAVGAVNTIVPVSQRDGK 1352
Query: 330 GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF----VLAGAGGAGRALAF 385
KL+G NTD EA IE + + + G G++ V+ GAGG RA +
Sbjct: 1353 IKLLGANTDWEAIKMKIEANLPAQ------QALGLITPGQLVRAAGVVIGAGGTARAAVY 1406
Query: 386 GAKSRG 391
S G
Sbjct: 1407 ALHSLG 1412
>gi|322387345|ref|ZP_08060955.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|419842613|ref|ZP_14365950.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|321141874|gb|EFX37369.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|385703558|gb|EIG40671.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
Length = 284
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ VD +L + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVDATELAETVANIRRYQMY 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A I AVNTI+ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIAYLDQLSEEACLIGAVNTIVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+G+ SF ++ + VL GAGGA +A+
Sbjct: 109 -KGFFKSLPSF--KISRKRLVLLGAGGAAKAI 137
>gi|417090798|ref|ZP_11956121.1| shikimate 5-dehydrogenase [Streptococcus suis R61]
gi|353533416|gb|EHC03071.1| shikimate 5-dehydrogenase [Streptococcus suis R61]
Length = 289
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF 397
K RG++ + + + G GGA A+ A GA+ + IF
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIF 155
>gi|427705993|ref|YP_007048370.1| shikimate dehydrogenase [Nostoc sp. PCC 7107]
gi|427358498|gb|AFY41220.1| shikimate dehydrogenase [Nostoc sp. PCC 7107]
Length = 290
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 16/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+ T++ G+I PV HS P++HN + + IY+P + ++L+ + +++
Sbjct: 4 VTGTTELLGVIGHPVEHSLSPVMHNAALAALGVDYIYLPFPIAPENLQIAIAGFATIGVT 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A+M E+ +AQAI AVNT+ R+ + + +G NTD E I ++
Sbjct: 64 GFSVTIPHKQAIMPLLSEITLVAQAIGAVNTVTRK--NQQWVGTNTDIEGFIAPLQ---- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ + ++ ++ G GGA RA+ G G
Sbjct: 118 --------TTYQQDWSQKVAIILGNGGAARAVVAGCYQLG 149
>gi|365891052|ref|ZP_09429522.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. STM 3809]
gi|365333035|emb|CCE02053.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. STM 3809]
Length = 293
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGVRCHYQLIEVAGADRAGLATLLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV+ DE+ P A A+ AVNT++ R DG+LIG+NTD A+E I G
Sbjct: 75 YPYKEAVVALLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDTTGFERAVEPLISRTG-- 130
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID 400
GR+ L GAGG G+A+AF + G + + IFD +
Sbjct: 131 -----------GRVVALIGAGGVGKAIAFALANLGVSDLRIFDTE 164
>gi|386585864|ref|YP_006082266.1| shikimate 5-dehydrogenase [Streptococcus suis D12]
gi|353738010|gb|AER19018.1| shikimate 5-dehydrogenase [Streptococcus suis D12]
Length = 289
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF 397
K RG++ + + + G GGA A+ A GA+ + IF
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIF 155
>gi|333896985|ref|YP_004470859.1| shikimate dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112250|gb|AEF17187.1| Shikimate dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 283
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+IN+ T ++G+I P+GHS P++HN F ++++N +YV V +DLK +
Sbjct: 2 NINSKTSIYGIIGHPIGHSLSPLIHNYAFENLDFNSVYVSFDVNEEDLKDAIIGIKALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE+V+K+ D + A+ I AVNTI + + G L GYNTD +T +++
Sbjct: 62 KGLNVTVPHKESVIKYLDRISDEAKLIGAVNTI--KNNSGSLEGYNTD----VTGFMESL 115
Query: 351 KERG 354
KE
Sbjct: 116 KEHN 119
>gi|374322326|ref|YP_005075455.1| shikimate dehydrogenase [Paenibacillus terrae HPL-003]
gi|357201335|gb|AET59232.1| shikimate dehydrogenase [Paenibacillus terrae HPL-003]
Length = 296
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ GL++ P+GHS P +HN F + N Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGMRALNV 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G++V P K A++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTAIVQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF 397
GY G L G+ L G+GGA +A A G A + IF
Sbjct: 114 ---GYVRNLREHGIDLTGKKMTLVGSGGAATPIAIEAARAGLAEISIF 158
>gi|146318905|ref|YP_001198617.1| shikimate 5-dehydrogenase [Streptococcus suis 05ZYH33]
gi|146321113|ref|YP_001200824.1| shikimate 5-dehydrogenase [Streptococcus suis 98HAH33]
gi|253751980|ref|YP_003025121.1| shikimate 5-dehydrogenase [Streptococcus suis SC84]
gi|253753805|ref|YP_003026946.1| shikimate 5-dehydrogenase [Streptococcus suis P1/7]
gi|253755319|ref|YP_003028459.1| shikimate 5-dehydrogenase [Streptococcus suis BM407]
gi|386578100|ref|YP_006074506.1| shikimate 5-dehydrogenase [Streptococcus suis GZ1]
gi|386580154|ref|YP_006076559.1| shikimate 5-dehydrogenase [Streptococcus suis JS14]
gi|386582177|ref|YP_006078581.1| shikimate 5-dehydrogenase [Streptococcus suis SS12]
gi|386588364|ref|YP_006084765.1| shikimate 5-dehydrogenase [Streptococcus suis A7]
gi|403061736|ref|YP_006649952.1| shikimate 5-dehydrogenase [Streptococcus suis S735]
gi|166219225|sp|A4W235.1|AROE_STRS2 RecName: Full=Shikimate dehydrogenase
gi|166219227|sp|A4VVS8.1|AROE_STRSY RecName: Full=Shikimate dehydrogenase
gi|145689711|gb|ABP90217.1| Shikimate 5-dehydrogenase [Streptococcus suis 05ZYH33]
gi|145691919|gb|ABP92424.1| Shikimate 5-dehydrogenase [Streptococcus suis 98HAH33]
gi|251816269|emb|CAZ51897.1| shikimate 5-dehydrogenase [Streptococcus suis SC84]
gi|251817783|emb|CAZ55535.1| shikimate 5-dehydrogenase [Streptococcus suis BM407]
gi|251820051|emb|CAR46278.1| shikimate 5-dehydrogenase [Streptococcus suis P1/7]
gi|292558563|gb|ADE31564.1| Shikimate 5-dehydrogenase [Streptococcus suis GZ1]
gi|319758346|gb|ADV70288.1| shikimate 5-dehydrogenase [Streptococcus suis JS14]
gi|353734323|gb|AER15333.1| shikimate 5-dehydrogenase [Streptococcus suis SS12]
gi|354985525|gb|AER44423.1| shikimate 5-dehydrogenase [Streptococcus suis A7]
gi|402809062|gb|AFR00554.1| shikimate 5-dehydrogenase [Streptococcus suis S735]
Length = 289
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF 397
K RG++ + + + G GGA A+ A GA+ + IF
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIF 155
>gi|290512582|ref|ZP_06551948.1| 3-dehydroquinate dehydratase, type I [Klebsiella sp. 1_1_55]
gi|289774923|gb|EFD82925.1| 3-dehydroquinate dehydratase, type I [Klebsiella sp. 1_1_55]
Length = 255
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 20/246 (8%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL---- 56
V NIT + T+IC PL+ ++++++L N + GAD++E R+D +F +D+
Sbjct: 11 VKNITFQEGETLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVD---HFTQVRDMTQVM 67
Query: 57 ----EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVAS 110
EI + K LP+L +R K GG E + A G D +D EL +
Sbjct: 68 AALAEIRGSLKALPLLFTFRSKKEGGETEISDEAYFALNREAARSGLVDVIDIELFNDEA 127
Query: 111 NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDIT 167
I +H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+
Sbjct: 128 QIRALVDDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVL 187
Query: 168 EI--ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESL 225
+ A + + P+I S+G+ G VS++ F A+ +G++ G + L
Sbjct: 188 TLLAATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKL 247
Query: 226 RQTYKV 231
R+ +
Sbjct: 248 REVMDI 253
>gi|268315725|ref|YP_003289444.1| shikimate 5-dehydrogenase [Rhodothermus marinus DSM 4252]
gi|262333259|gb|ACY47056.1| shikimate 5-dehydrogenase [Rhodothermus marinus DSM 4252]
Length = 297
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I A T+ L+ PV HS P++HN F+ + +Y+ V D L + + + FA
Sbjct: 9 IRATTRPIALLGDPVAHSFSPLIHNTGFQTQGLDFVYLACRVPKDALPEAIAGLRALGFA 68
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIE 347
G +V P+KEAV D P A+AI AVNTI+ R +DG +LIG NTD E
Sbjct: 69 GANVTIPHKEAVRPLLDRCTPRAEAIGAVNTIVCR-ADGSGAVELIGDNTDVE------- 120
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
G+ S LAG V+ GAGGA RA+ +
Sbjct: 121 ------GFLEPLQSLADRLAGAEMVVLGAGGAARAVVYA 153
>gi|406944124|gb|EKD75970.1| hypothetical protein ACD_43C00266G0001, partial [uncultured
bacterium]
Length = 299
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 156 IIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKF-NGALVYGSLKGT 214
I K+ ++N + ++ I QL IIA +GE G++++L + + A + + +
Sbjct: 5 IPKIATTINTVADLNIIAQLQQKYGKKIIAIGMGELGMMTRLYNKSWLTFAAISTASQTA 64
Query: 215 PVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMF 274
P G TV LR ++T+++GLI + HS P LHN F+ + Y
Sbjct: 65 P--GQLTVTQLR---------SNTQLYGLIGDDIAHSLSPSLHNDWFKKQHLPHRYQLWQ 113
Query: 275 VDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIG 334
++L +F ++ G SV P+K+ V+ +C+++ A+AI AVNT++RR KL G
Sbjct: 114 ANNLPEFMEVFNFFQLPGASVTKPFKKEVISYCNKLDRHAKAIGAVNTLVRR--GKKLYG 171
Query: 335 YNTDC 339
YNTD
Sbjct: 172 YNTDW 176
>gi|194017689|ref|ZP_03056299.1| shikimate 5-dehydrogenase [Bacillus pumilus ATCC 7061]
gi|194010589|gb|EDW20161.1| shikimate 5-dehydrogenase [Bacillus pumilus ATCC 7061]
Length = 280
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 16/146 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I PVGHS P +HN + +G Y V DDLK S + +GF+V
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAISGMKALGISGFNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K +M++ D++ A+ + AVNT+ R G+L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVDIMQYLDKIDVTAERLRAVNTV--RLEGGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRAL 383
PL+ F++ GAGGA A+
Sbjct: 117 -------PLSELSFLMIGAGGAANAI 135
>gi|389856373|ref|YP_006358616.1| shikimate 5-dehydrogenase [Streptococcus suis ST1]
gi|353740091|gb|AER21098.1| shikimate 5-dehydrogenase [Streptococcus suis ST1]
Length = 289
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF 397
K RG++ + + + G GGA A+ A GA+ + IF
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIF 155
>gi|337287267|ref|YP_004626740.1| shikimate 5-dehydrogenase [Thermodesulfatator indicus DSM 15286]
gi|335360095|gb|AEH45776.1| shikimate 5-dehydrogenase [Thermodesulfatator indicus DSM 15286]
Length = 273
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
+G+I PV HS P +HN F+ + +Y +P+ ++L + + + G SV P
Sbjct: 4 YGIIGWPVAHSLSPAMHNAAFKSLGIRAVYGLLPLAPENLAEGIKGIRALNIKGVSVTVP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
+KE VM DE+ P+A I AVNTI+ + DG+L+G+NTD A+E+ I
Sbjct: 64 HKETVMPLLDEIDPVASEIGAVNTIVNK--DGRLLGFNTDWIGVKKALEEKI 113
>gi|124486464|ref|YP_001031080.1| hypothetical protein Mlab_1652 [Methanocorpusculum labreanum Z]
gi|124364005|gb|ABN07813.1| shikimate 5-dehydrogenase [Methanocorpusculum labreanum Z]
Length = 473
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 151/344 (43%), Gaps = 54/344 (15%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T CA ++A+ +V + +A ++GA+ +E RLD P ++ +P +
Sbjct: 2 TANCAVIVAKDEREVRTLSEEAISKGAEALEFRLDSF----PVIPADLSFLSCGVPSIAT 57
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
R + +R E A GA Y+D E + ++L Q+ Q I S
Sbjct: 58 LRSPL--------DEERKEIFIRALSSGATYIDIE---SDSVLRGQFPKEQ----VICSY 102
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVN---DITEIARIFQLLSHCQVPIIAYS 187
+ +TP+++++ + +Q++G I K F V D+ + +L P I
Sbjct: 103 HDFEKTPADDEILTIFKDLQSSG--IPKAAFMVRGPADLLAVWNAASVLRERGYPFIFIG 160
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL----GLPTVESLRQTYKVEHINADTKVFGL 243
+G G V+++ + + L Y +L+ P L G T+E + E + D ++ +
Sbjct: 161 MGAAGEVTRIRAAELGSMLNYCALR--PELASAPGQITLE------EAERLGTDPQITAV 212
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYV---------PMFVDDLKKFFSTYSSPDFAGFS 294
P+ H+ P +HN F+ G YV P+ D +KK+ G +
Sbjct: 213 TGYPLTHTFSPEIHNAAFKAAKIRGRYVKIPAASQEVPLIPDVIKKY-------RIIGMN 265
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
V P+KE+V+ + PLA++ AVNTI R S L GYNTD
Sbjct: 266 VTIPHKESVIPLLKRIDPLAESAGAVNTI--RNSPAGLEGYNTD 307
>gi|299535724|ref|ZP_07049045.1| shikimate dehydrogenase [Lysinibacillus fusiformis ZC1]
gi|424739107|ref|ZP_18167529.1| shikimate dehydrogenase [Lysinibacillus fusiformis ZB2]
gi|298728924|gb|EFI69478.1| shikimate dehydrogenase [Lysinibacillus fusiformis ZC1]
gi|422946972|gb|EKU41374.1| shikimate dehydrogenase [Lysinibacillus fusiformis ZB2]
Length = 276
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K F ++ P+ HSK P +HN F ++ + Y+P+ V D L+ + + +G++V
Sbjct: 3 KWFAVMGDPIEHSKSPAMHNAWFEDMSIDATYIPLHVTPDQLESAVAGLKTLGASGWNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
P+K A++ + DE+ LAQ + AVNT++R + GKL GYNTD + ++E+A+
Sbjct: 63 IPHKTAIIPYLDELDELAQKMGAVNTVVRT-TKGKLKGYNTDGIGFVRSLEEAV 115
>gi|450126912|ref|ZP_21868406.1| shikimate 5-dehydrogenase [Streptococcus mutans U2A]
gi|449231156|gb|EMC30368.1| shikimate 5-dehydrogenase [Streptococcus mutans U2A]
Length = 289
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINVSMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTDG----------- 108
Query: 351 KERGYKNGTASFGS-PLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
G+ +F +A ++ + G GGA A+ A GA+
Sbjct: 109 --FGFFKSLGTFADFDVADKVITILGGGGAATAIIAQAVINGAK 150
>gi|333987942|ref|YP_004520549.1| shikimate dehydrogenase [Methanobacterium sp. SWAN-1]
gi|333826086|gb|AEG18748.1| Shikimate dehydrogenase [Methanobacterium sp. SWAN-1]
Length = 283
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 18/166 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I T +FG++ PV HS P +HN TF + + +YVP V L+ S
Sbjct: 2 ITGKTSIFGIMGDPVEHSLSPPMHNTTFSKLAIDSVYVPFHVKKGYLQSAMVGARSMGIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K AV+++ D + A+ I AVNT+ + + ++ GYNTD ++ AIE+
Sbjct: 62 GLNVTIPHKTAVIEYLDSLDTAAKLIGAVNTV--KFDENEVKGYNTDGLGAVKAIEEVTT 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
+ K V+ GAGGA RA++F GA ++
Sbjct: 120 VKNKK--------------VVILGAGGAARAISFQILLEGAESLVI 151
>gi|402300002|ref|ZP_10819555.1| shikimate 5-dehydrogenase [Bacillus alcalophilus ATCC 27647]
gi|401724793|gb|EJS98122.1| shikimate 5-dehydrogenase [Bacillus alcalophilus ATCC 27647]
Length = 282
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
KV+GL PVGHS PI+H F+ + Y V D +++ + + G +V
Sbjct: 3 KVYGLFGYPVGHSMSPIMHEAAFKELGQKANYHAFNVKPDKIEEAVMAIRALELGGCNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K VM + DE+ P A I AVNTI+ + GKL G+NTD RGY
Sbjct: 63 IPHKVNVMNYLDEIDPEAAEIGAVNTIVNQ--GGKLKGFNTDG-------------RGYL 107
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
L G+ + GAGGA RA+
Sbjct: 108 QSLLEIAHTLEGKSVAIIGAGGAARAI 134
>gi|150400570|ref|YP_001324336.1| 3-dehydroquinate dehydratase [Methanococcus aeolicus Nankai-3]
gi|166219201|sp|A6UTA2.1|AROD_META3 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|150013273|gb|ABR55724.1| 3-dehydroquinate dehydratase, type I [Methanococcus aeolicus
Nankai-3]
Length = 218
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ +++ L + +A + AD+VE R D + + +D+E + P +I
Sbjct: 1 MICIPVIDKNINDALKSAEEA-LKVADIVEFRADLLESVDK-QDIEKMA---KYPSIITI 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH-QSGTRFIVSC 130
R W GG Y GD +KR+E A + ++D ELK N ++ + S T+ IVS
Sbjct: 56 RADWEGGEYTGDNNKRIELYKTAIENNVKFIDIELKEEKNKELVEFRNKIGSKTKIIVSY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TPS++DL +V + G DI K + ++ +IF ++S + II +GE
Sbjct: 116 HDFEKTPSKQDLMEIVEKELKIG-DIAKFATMAQNKNDLLKIFAVISIYEGKIIGIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKG 213
G +++++ + L + S++G
Sbjct: 175 VGKLTRIIGVELGSILTFASMEG 197
>gi|288937160|ref|YP_003441219.1| 3-dehydroquinate dehydratase, type I [Klebsiella variicola At-22]
gi|288891869|gb|ADC60187.1| 3-dehydroquinate dehydratase, type I [Klebsiella variicola At-22]
Length = 251
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 20/246 (8%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
V NIT + T+IC PL+ ++++++L N + GAD++E R+D +F +D+ ++
Sbjct: 7 VKNITFQEGETLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVD---HFTQVRDMTQVM 63
Query: 61 TK--------KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVAS 110
K LP+L +R K GG E + A G D +D EL +
Sbjct: 64 AALAEIRGALKALPLLFTFRSKKEGGETEISDEAYFALNREAARSGLVDVIDIELFNDEA 123
Query: 111 NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDIT 167
I +H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+
Sbjct: 124 QIRALVDDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVL 183
Query: 168 EI--ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESL 225
+ A + + P+I S+G+ G VS++ F A+ +G++ G + L
Sbjct: 184 TLLAATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKL 243
Query: 226 RQTYKV 231
R+ +
Sbjct: 244 REVMDI 249
>gi|300867823|ref|ZP_07112465.1| Shikimate dehydrogenase [Oscillatoria sp. PCC 6506]
gi|300334154|emb|CBN57639.1| Shikimate dehydrogenase [Oscillatoria sp. PCC 6506]
Length = 292
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I TK+ G+I P+ HS P++HN H+ + +Y+ P+ +DL S +++
Sbjct: 2 IKGTTKLLGVIGHPIEHSLSPVMHNAALSHLGLDIVYLAFPVKPEDLNVAISGFAAVGLL 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFS+ P+K+ ++ EV P+A A+ AVNT+ R + G NTD + +
Sbjct: 62 GFSITIPHKQGILPLLSEVSPVAIAVGAVNTVYRTANGWG--GTNTDVRGFLAPLRSLSL 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ G K + ++ V+ G+GGA RA+ G G
Sbjct: 120 KTGTKQDWSQ-------KVAVILGSGGAARAVVAGCAELG 152
>gi|385799748|ref|YP_005836152.1| shikimate 5-dehydrogenase [Halanaerobium praevalens DSM 2228]
gi|309389112|gb|ADO76992.1| shikimate 5-dehydrogenase [Halanaerobium praevalens DSM 2228]
Length = 303
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 17/151 (11%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAG 292
N +T ++GL+ + + HS P LHN FR +N N +Y+ + DL + + + F+G
Sbjct: 7 NNETNLYGLLGRDLSHSISPSLHNNGFRDLNINAVYLMLESKEKDLANYIDSLKTLGFSG 66
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
++V PYKEA++ + + LA+A AVNT++ R G+L GYNTD IE++
Sbjct: 67 WNVTLPYKEAIIPYLNGFSSLARASGAVNTVLNR--RGRLTGYNTDVIGFQRQIEES--- 121
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
G + + V+ GAGG RA+
Sbjct: 122 ----------GVKVKNKKAVVIGAGGGARAV 142
>gi|306833782|ref|ZP_07466908.1| shikimate dehydrogenase [Streptococcus bovis ATCC 700338]
gi|336064552|ref|YP_004559411.1| shikimate 5-dehydrogenase [Streptococcus pasteurianus ATCC 43144]
gi|304424119|gb|EFM27259.1| shikimate dehydrogenase [Streptococcus bovis ATCC 700338]
gi|334282752|dbj|BAK30325.1| shikimate 5-dehydrogenase [Streptococcus pasteurianus ATCC 43144]
Length = 289
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN T++ +++ P+ HS P +HN F NG+YV + +DL D
Sbjct: 2 QINGYTRLAAVVATPIKHSISPFIHNYAFDKTGVNGVYVAWDIPEEDLAITLENVKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+ V+ + DE+ AQ I AVNT+I R DGKLIG+NTD
Sbjct: 62 FGVNISMPYKQKVIPYMDELTDSAQLIGAVNTVINR--DGKLIGHNTDG----------- 108
Query: 351 KERGYKNGTASFGS-PLAGRMFVLAGAGGAGRALAFGAKSRGA 392
G+ A+F + + + G GGA AL A GA
Sbjct: 109 --IGFFRSLATFADFDVKDKTMTILGGGGAATALIAQASLNGA 149
>gi|350266770|ref|YP_004878077.1| shikimate dehydrogenase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599657|gb|AEP87445.1| shikimate dehydrogenase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 280
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FG+I P+GHS P +HN + + ++ +G Y V DDL+ + G +V
Sbjct: 3 KLFGVIGNPIGHSMSPDIHNASLKDLSLDGHYHAFKVEEDDLEDAVKGIRALGVHGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT +RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDDSAKVIGAVNT-VRREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
P++ F++ GAGGA RA+
Sbjct: 117 --------PISELSFLMIGAGGAARAI 135
>gi|418412007|ref|ZP_12985273.1| shikimate dehydrogenase [Staphylococcus epidermidis BVS058A4]
gi|410891590|gb|EKS39387.1| shikimate dehydrogenase [Staphylococcus epidermidis BVS058A4]
Length = 269
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ FR +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFRSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYESIEDAYILILGAGGASKGIA 133
>gi|157737319|ref|YP_001490002.1| shikimate 5-dehydrogenase [Arcobacter butzleri RM4018]
gi|157699173|gb|ABV67333.1| shikimate 5-dehydrogenase [Arcobacter butzleri RM4018]
Length = 264
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
F + PV HSK P + N H+NYNGIY ++D K T+ ++G ++ P+K
Sbjct: 4 FVIFGNPVVHSKSPQMQNAGLNHINYNGIYEKHHLEDGSKIKETFLRNGYSGANITVPHK 63
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E D V LAQ I AVNT + DGK+ YNTD + AIE
Sbjct: 64 EVAFINADIVKGLAQKIKAVNT--YKLVDGKIEAYNTDAPGFLKAIE------------- 108
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
SFG + +L GAGG +A+ + + +V + +
Sbjct: 109 SFGEV---KNVLLLGAGGTAKAITIALQEKNIKVTVLN 143
>gi|406928508|gb|EKD64296.1| hypothetical protein ACD_51C00028G0022 [uncultured bacterium]
Length = 221
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 106/206 (51%), Gaps = 12/206 (5%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCIN--NFQPGKDLEIILTKKPLPVL 68
++ C P+ A++++++ + AD++EI LD +FQ K L+ + P L
Sbjct: 2 SLYCLPIKARTIKELEATC----VPYADIIEIWLDQFEELDFQALKKLQKKIK---KPFL 54
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIV 128
V +PK G ++G E +R+ L + D GA Y+D +K ++I ++ + + I+
Sbjct: 55 YVLKPKSEKGAFKGTEKERIALLKKSLDFGASYIDVGIKTRTSIGDLIATARKKHVKTII 114
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIA 185
S + +TPS L + +RM+ ++IK +N T+I +F ++ + PII
Sbjct: 115 SYHNFKKTPSAATLANIYARMRKHKPNVIKFAVKINKSTDIGVLFGMIIRAEKDAQPIIT 174
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSL 211
+GE+G ++++L+PK L Y L
Sbjct: 175 LGMGEKGKITRILAPKLGNYLYYAPL 200
>gi|306820400|ref|ZP_07454037.1| shikimate dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551563|gb|EFM39517.1| shikimate dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 288
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I T++ GLI P+ HS+ P +HN F + Y+ + V + LK+ +
Sbjct: 4 RIQGTTRLIGLIGTPIKHSRSPHMHNSAFEKTGQDYAYLCLEVGKEGLKQALDALKLFNA 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ FP K+ V+++ DE+ A+ I +VNTI K+ GYNTD + +IE+
Sbjct: 64 KGSNITFPNKQEVIQYLDEISEDAKIIGSVNTITIDDETKKIKGYNTDGRGFVASIEEL- 122
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID 400
+ YK G VL G GGAGRA+A G ++I DID
Sbjct: 123 -KIDYK-----------GNKVVLLGVGGAGRAIAIQLAYEGVGELIIKDID 161
>gi|222529868|ref|YP_002573750.1| shikimate 5-dehydrogenase [Caldicellulosiruptor bescii DSM 6725]
gi|254806728|sp|B9MKW9.1|AROE_ANATD RecName: Full=Shikimate dehydrogenase
gi|222456715|gb|ACM60977.1| shikimate 5-dehydrogenase [Caldicellulosiruptor bescii DSM 6725]
Length = 288
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFS-TYSSPDFAGFSVGFP 298
LI K + HS P +HN + + IY + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFIHNRILSEFDIDAIYSNLELLDTEMLKEFVEMVRKDEDVVGFNITIP 65
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE +++FCDEV + I A NT+ + DGKL+ YNTD G+K
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKEDGKLLAYNTDW-------------IGFKRS 110
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + + ++ G+GGA +A +G GA+ V
Sbjct: 111 LEDRGVDVKDKKILVLGSGGAAKACIYGLYRMGAKEV 147
>gi|227508321|ref|ZP_03938370.1| shikimate 5-dehydrogenase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227523538|ref|ZP_03953587.1| shikimate 5-dehydrogenase [Lactobacillus hilgardii ATCC 8290]
gi|227089303|gb|EEI24615.1| shikimate 5-dehydrogenase [Lactobacillus hilgardii ATCC 8290]
gi|227192210|gb|EEI72277.1| shikimate 5-dehydrogenase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 290
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ TK++GL++ P HS P++HN +F+ NG+Y+ V ++L+ +
Sbjct: 2 IDGHTKLYGLLAHPAAHSLSPLIHNTSFKVTGINGVYLAFDVMPNELQTSVDAIRTMAIG 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K V+ DE+ A+ + AVNT+I R DGKL+G TD + I DA+K
Sbjct: 62 GVNLSMPLKTTVIPLLDEITSRAERLNAVNTVINR--DGKLVGDTTDGQGFI----DALK 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
Y+N + + + + GAGGAGR++
Sbjct: 116 ---YQNVS------VEDKTLTVLGAGGAGRSI 138
>gi|206576517|ref|YP_002240460.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae 342]
gi|229488296|sp|B5Y1W9.1|AROD_KLEP3 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|206565575|gb|ACI07351.1| 3-dehydroquinate dehydratase, type I [Klebsiella pneumoniae 342]
Length = 251
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 20/246 (8%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
V NIT + T+IC PL+ ++++++L N + GAD++E R+D +F +D+ ++
Sbjct: 7 VKNITFQEGETLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVD---HFTQVRDMTQVM 63
Query: 61 TK--------KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVAS 110
K LP+L +R K GG E + A G D +D EL +
Sbjct: 64 AALAEIRGALKALPLLFTFRSKKEGGETEISDEAYFALNREAARSGLVDVIDIELFNDEA 123
Query: 111 NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDIT 167
I +H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+
Sbjct: 124 QIHALVDDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVL 183
Query: 168 EI--ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESL 225
+ A + + P+I S+G+ G VS++ F A+ +G++ G + L
Sbjct: 184 TLLAATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKL 243
Query: 226 RQTYKV 231
R+ +
Sbjct: 244 REVMDI 249
>gi|45358499|ref|NP_988056.1| shikimate 5-dehydrogenase [Methanococcus maripaludis S2]
gi|74554623|sp|Q6LYQ2.1|AROE_METMP RecName: Full=Shikimate dehydrogenase
gi|44921257|emb|CAF30492.1| shikimate 5-dehydrogenase [Methanococcus maripaludis S2]
Length = 278
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 17/154 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN+ TK+ GLI PV HS PI+HN + + N Y V ++LK + + +F
Sbjct: 2 INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNITIPHKMNIMKYLDEIDCDAEAIGAVNTV--KIENGKAIGYNTDGIGVKKALEE--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
K G + ++ G+GGA RA++F
Sbjct: 117 ----KTGILIN------KNILIIGSGGASRAVSF 140
>gi|58263434|ref|XP_569127.1| aromatic amino acid family biosynthesis-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134108382|ref|XP_777142.1| hypothetical protein CNBB3730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338817572|sp|P0CM23.1|ARO1_CRYNB RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|338817573|sp|P0CM22.1|ARO1_CRYNJ RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|50259827|gb|EAL22495.1| hypothetical protein CNBB3730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223777|gb|AAW41820.1| aromatic amino acid family biosynthesis-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 1611
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 161/394 (40%), Gaps = 52/394 (13%)
Query: 35 EGADVVEIRLDCINNF-----QPG--------KDLEIILTKKPLPVLIVYRPKWAGGLYE 81
EGAD VE R+D ++ +P K L + LP++ R K GG+
Sbjct: 1111 EGADAVEFRVDLLSTTGQAPTRPALPPISFVAKQLASLRLATTLPIVFSVRSKDQGGMVP 1170
Query: 82 GDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEE 140
D + AL L +YVD E+ +L + T I S +
Sbjct: 1171 SDNAEAYGALVRLGLRCACEYVDLEVCWPEQLLDSIVQLKRE-THIIASWH-----DWTG 1224
Query: 141 DLGYLVSRMQATG------ADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVG 189
D+ + M+A D+ K+V + + A++ + Q P++A ++G
Sbjct: 1225 DMAWDGEEMKAKHVLCEKYGDVAKIVGTAKSGLDNAKLAIFVGEVQSHPGAKPLLAINMG 1284
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G +S++L+P + + +L G T + Q + + K F L P+
Sbjct: 1285 AAGQLSRILNPILT-PVTHDALPSRAAPGQLTAREILQARALTG-SLPAKKFVLFGSPIA 1342
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKK-FFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
HS P+LHN F + Y + + + SPDF G SV P K ++ D
Sbjct: 1343 HSVSPLLHNAGFATLGLPHTYRLHESEKVDQGVLEVIRSPDFGGASVTIPLKLDIIPHLD 1402
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA---SFGSP 365
V A+ I AVNT+I P GKL G NTD + AI + +N A S+GS
Sbjct: 1403 SVSEDAKIIGAVNTVI--PRGGKLHGENTDWQ--------AIHQAAAQNLDADALSYGSS 1452
Query: 366 LAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFD 398
A ++ GAGG RA + K R + +F+
Sbjct: 1453 TA----LVIGAGGTCRAAIYAMHKLRFKTIYLFN 1482
>gi|78185871|ref|YP_378305.1| shikimate 5-dehydrogenase [Synechococcus sp. CC9902]
gi|78170165|gb|ABB27262.1| shikimate dehydrogenase [Synechococcus sp. CC9902]
Length = 289
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 19/159 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFR--HVNYNGIYVPMFVDDLKKFFSTYSSPDFA 291
IN DT + GL+ PV HS P +HN + +N++ + +P ++LK+ + +
Sbjct: 2 INGDTGLVGLLGNPVRHSLSPAMHNAALQALQLNWSYLALPCASENLKEVLQGLRAVNCR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSD-GKLIGYNTDCEASITAIEDAI 350
G +V P+K+ V + C E+ PLA+ + AVNT+I P D G G NTD E +T + +
Sbjct: 62 GLNVTIPHKQDVAELCQELSPLAKRLGAVNTLI--PLDSGGWHGTNTDVEGFLTPLGE-- 117
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
+ ++N + + G GG+ RA+A G +S
Sbjct: 118 -QSSWQNCHGA-----------IIGCGGSARAIAAGLQS 144
>gi|331266124|ref|YP_004325754.1| shikimate 5-dehydrogenase [Streptococcus oralis Uo5]
gi|326682796|emb|CBZ00413.1| shikimate 5-dehydrogenase [Streptococcus oralis Uo5]
Length = 284
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++KP+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVAKPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ F DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVLPFLDELSDEARLIGAVNTVVNH--NGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRAL 383
SF ++G+ + GAGGA R++
Sbjct: 112 FKSLPSF--TISGKKMTILGAGGAARSI 137
>gi|212224285|ref|YP_002307521.1| shikimate 5-dehydrogenase [Thermococcus onnurineus NA1]
gi|212009242|gb|ACJ16624.1| aroE shikimate 5-dehydrogenase [Thermococcus onnurineus NA1]
Length = 275
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
++A+T ++GLI +PV HS P +HN FR N +Y+ V DL+ + G
Sbjct: 1 MDAETVLYGLIGRPVSHSLSPAMHNALFRLYGMNAVYLAFEVSDLEGAIKGIRALGIRGL 60
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
+V P+KE V+ D + A+A+ +VNT++ R G+LIG+NTD + A+E K +
Sbjct: 61 NVTMPHKETVVGHLDGLSSEAEALNSVNTVVNR--GGELIGHNTDGVGARKALERFTKLK 118
Query: 354 GYK 356
G +
Sbjct: 119 GRR 121
>gi|227511332|ref|ZP_03941381.1| shikimate 5-dehydrogenase [Lactobacillus buchneri ATCC 11577]
gi|227085485|gb|EEI20797.1| shikimate 5-dehydrogenase [Lactobacillus buchneri ATCC 11577]
Length = 290
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ TK++GL++ P HS P++HN +F+ NG+Y+ V ++L+ +
Sbjct: 2 IDGHTKLYGLLAHPAAHSLSPLIHNTSFKVTGINGVYLAFDVMPNELQTSVDAIRTMAIG 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K V+ DE+ A+ + AVNT+I R DGKL+G TD + I DA+K
Sbjct: 62 GVNLSMPLKTTVIPLLDEITSRAERLNAVNTVINR--DGKLVGDTTDGQGFI----DALK 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
Y+N + + + + GAGGAGR++
Sbjct: 116 ---YQNVS------VEDKTLTVLGAGGAGRSI 138
>gi|421277007|ref|ZP_15727827.1| shikimate dehydrogenase [Streptococcus mitis SPAR10]
gi|395876288|gb|EJG87364.1| shikimate dehydrogenase [Streptococcus mitis SPAR10]
Length = 284
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ VD +L + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVDATELAETVANIRRYQMY 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEACLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+G+ SF ++ + VL GAGGA +A+
Sbjct: 109 -KGFFKSLPSF--KISRKRLVLLGAGGAAKAI 137
>gi|375307128|ref|ZP_09772418.1| quinate/shikimate dehydrogenase [Paenibacillus sp. Aloe-11]
gi|375080846|gb|EHS59064.1| quinate/shikimate dehydrogenase [Paenibacillus sp. Aloe-11]
Length = 296
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ GL++ P+GHS P +HN F + N +Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNVYMAFEVGNEQLEEVVRGLRALNI 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G++V P K ++++ DE+ A+ AVNT++ ++GKL GY+TD
Sbjct: 66 RGYNVSMPNKTTILQYLDELDDSARFTGAVNTVVN--TNGKLKGYSTDGS---------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID 400
GY G L G+ L G+GGA +A A G A + IF D
Sbjct: 114 ---GYVRNLREHGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARD 161
>gi|340624704|ref|YP_004743157.1| 3-dehydroquinate dehydratase [Methanococcus maripaludis X1]
gi|339904972|gb|AEK20414.1| 3-dehydroquinate dehydratase [Methanococcus maripaludis X1]
Length = 218
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 8/222 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ + V +++ +A G D+VE R+D +N+ + E I +P +I
Sbjct: 1 MICIPVIDKDVSDAINSAKEALKYG-DIVEFRIDLLNDV----NFEDIEEFSKIPSIITI 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH-QSGTRFIVSC 130
R +W GG ++ +++R+E L A A +VD ELK N+ Y + S T+ IVS
Sbjct: 56 RAEWEGGAWKKSDNERIELLKHAIKNNAKFVDIELKEEKNLELVNYRNEIGSTTKIIVSY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TP ++L +V + G DI K + + +I L++ IIA +GE
Sbjct: 116 HDFEKTPEIDELIDVVEKELKIG-DIAKFATFAHSKEDTLKILNLMNKYSGKIIAIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL-GLPTVESLRQTYKV 231
G ++++L F L + S++G G V+ L++ K+
Sbjct: 175 SGKLTRVLGLNFGSILTFASMEGKASAPGQVDVKKLKEILKL 216
>gi|126653885|ref|ZP_01725732.1| shikimate 5-dehydrogenase [Bacillus sp. B14905]
gi|126589610|gb|EAZ83749.1| shikimate 5-dehydrogenase [Bacillus sp. B14905]
Length = 276
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K F +I P+ HSK P +HN F ++ + Y+P+ V + L+ + + +G++V
Sbjct: 3 KWFAVIGDPIEHSKSPAMHNAWFEEMSIDATYIPIHVSSEQLESAVAGLKTLGASGWNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
P+K A++ + DE+ LAQ + AVNT++R ++GKL G+NTD + ++E+A+
Sbjct: 63 IPHKTAIIPYLDELDELAQKMGAVNTVVRT-TNGKLKGFNTDGVGFVRSLEEAV 115
>gi|217965421|ref|YP_002351099.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|386007213|ref|YP_005925491.1| aroE-1 [Listeria monocytogenes L99]
gi|386025803|ref|YP_005946579.1| shikimate 5-dehydrogenase [Listeria monocytogenes M7]
gi|217334691|gb|ACK40485.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|307570023|emb|CAR83202.1| aroE-1 [Listeria monocytogenes L99]
gi|336022384|gb|AEH91521.1| shikimate 5-dehydrogenase [Listeria monocytogenes M7]
Length = 291
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G+ + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GNDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|158523119|ref|YP_001530989.1| shikimate 5-dehydrogenase [Desulfococcus oleovorans Hxd3]
gi|158511945|gb|ABW68912.1| shikimate 5-dehydrogenase [Desulfococcus oleovorans Hxd3]
Length = 286
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAG 292
++ T++ +I PV HS P +HN F N N +YV V+D+ + + +F G
Sbjct: 4 VDTATRLCAVIGNPVEHSLSPAIHNAAFAARNLNFVYVAFRVNDVGPALAGMRALENFRG 63
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
S+ P+K + + DE+ L +A+ A+NT++ G+L G NTD ++ A+++A
Sbjct: 64 MSITIPHKISAIGHVDEITDLDRAMGAINTVVNE--KGRLTGSNTDGPGALKALKNA--- 118
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG--ARVVIFDID 400
G +G+ ++ GAGG RA+AF + A +V+ DID
Sbjct: 119 ----------GVETSGKTVLMLGAGGVARAIAFTLAWQADIAELVLLDID 158
>gi|418616268|ref|ZP_13179193.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU120]
gi|374821094|gb|EHR85161.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU120]
Length = 269
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP++ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVYQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|288555655|ref|YP_003427590.1| shikimate 5-dehydrogenase [Bacillus pseudofirmus OF4]
gi|288546815|gb|ADC50698.1| shikimate 5-dehydrogenase [Bacillus pseudofirmus OF4]
Length = 278
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K FGLI PV HS P +HN FR + Y + V+ DL++ G +V
Sbjct: 3 KRFGLIGHPVAHSMSPQMHNDAFRACEIDADYEAIDVEAGDLEEVMEKIRIGVLDGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M F DE+ A+ I AVNTI+R ++GKL+GYNTD + +IE +
Sbjct: 63 IPHKVAIMSFIDEIDREAERIGAVNTIVR--NNGKLVGYNTDGAGYMQSIEPYLP----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
S L ++ GAGGA RA+
Sbjct: 116 -------SNLHDINVLVIGAGGAARAV 135
>gi|317128280|ref|YP_004094562.1| shikimate 5-dehydrogenase [Bacillus cellulosilyticus DSM 2522]
gi|315473228|gb|ADU29831.1| shikimate 5-dehydrogenase [Bacillus cellulosilyticus DSM 2522]
Length = 281
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
++ G+I P+GHS P +HN +R + N Y V + L+ G +V
Sbjct: 3 QIIGVIGDPIGHSLSPHMHNAAYRELGINMEYHAFHVKREQLENALKGVRGLGIKGLNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K V+ + DEV LA+ + AVNTI+ DGKLIG+NTD E + ++ + I+
Sbjct: 63 IPHKVNVLPYLDEVDELARHLGAVNTIVN--EDGKLIGFNTDGEGYLQSLYEFIQ----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
L + ++ GAGGA RA+ + G + +I
Sbjct: 116 -------GDLQTKRVLMIGAGGASRAVTLTIANSGVKEII 148
>gi|407978440|ref|ZP_11159271.1| shikimate 5-dehydrogenase [Bacillus sp. HYC-10]
gi|407414998|gb|EKF36614.1| shikimate 5-dehydrogenase [Bacillus sp. HYC-10]
Length = 280
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 16/146 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 297
++GLI PVGHS P +HN + +G Y V+ DL S + +GF+V
Sbjct: 4 LYGLIGYPVGHSMSPDIHNAALKDAGIDGHYHGFQVEEHDLADAVSGMKALGISGFNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K +M++ D++ A+ + AVNT+ R G+L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVEIMQYLDKIDVTAERLRAVNTV--RLEKGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRAL 383
PL+ F++ GAGGA RA+
Sbjct: 117 -------PLSELSFLMIGAGGAARAI 135
>gi|347753134|ref|YP_004860699.1| Shikimate dehydrogenase [Bacillus coagulans 36D1]
gi|347585652|gb|AEP01919.1| Shikimate dehydrogenase [Bacillus coagulans 36D1]
Length = 280
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I P+ HS P +HN FR + + Y V ++L+ + + AGF+V
Sbjct: 4 LYGVIGDPIAHSLSPAMHNEAFRALGIDADYHAFHVTPENLEAAVNGMKAIGVAGFNVTI 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K+A+M + DE+ LA+ I AVNT++R P GYNTD + A+++
Sbjct: 64 PHKQAIMPYLDEIDLLAETIGAVNTVVRTPHG--WAGYNTDGPGFMQALKE--------- 112
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G ++G ++ GAGGA RA+ + GA V
Sbjct: 113 ---ESGRVISGEKVLVIGAGGAARAIYYTLCREGAVTV 147
>gi|417936145|ref|ZP_12579462.1| shikimate dehydrogenase [Streptococcus infantis X]
gi|343403054|gb|EGV15559.1| shikimate dehydrogenase [Streptococcus infantis X]
Length = 284
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ VD +L + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVDATELAETVANIRRYQMY 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEACLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+G+ SF ++ + VL GAGGA +A+
Sbjct: 109 -KGFFKSLPSF--KISRKRLVLLGAGGAAKAI 137
>gi|389573017|ref|ZP_10163093.1| shikimate dehydrogenase [Bacillus sp. M 2-6]
gi|388427174|gb|EIL84983.1| shikimate dehydrogenase [Bacillus sp. M 2-6]
Length = 300
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ + +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVNGMKAMGA 67
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AGF+V P K V+ + DE+ A+ A NT++ + DGKL+GYNTD
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSAKYTRASNTVVNK--DGKLVGYNTDG----------- 114
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
GY G LAG+ L G+GGA +A G R +
Sbjct: 115 --LGYVRNLIEHGVELAGQKVTLVGSGGAATPIAIQLAQSGIREI 157
>gi|448528629|ref|XP_003869735.1| Aro1 pentafunctional aromatic enzyme [Candida orthopsilosis Co
90-125]
gi|380354089|emb|CCG23602.1| Aro1 pentafunctional aromatic enzyme [Candida orthopsilosis]
Length = 1548
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 156/334 (46%), Gaps = 28/334 (8%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
GA+ VE+R+D + + + ++ LP++ R K GG++ ++ + +L
Sbjct: 1062 GANAVELRIDLLAKYDTSFIADQVGLLRKTVDLPIIYTIRTKSQGGMFPDEDLDTIRSLL 1121
Query: 93 L-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQ- 150
L +G D +D +L ++SN + + + +S T+ I S + +++ + Q
Sbjct: 1122 LFGIKIGVDVIDLQL-ISSNDVIDEVMAKRSHTKVIASHHDFTGQLKWDNVEWKTKYDQG 1180
Query: 151 -ATGADIIKLVFSVNDITEIARIFQLLSHCQV-PIIAYSVGERGLVSQLLSPKFNGALVY 208
+ ADI+KLV D + + + S + P+I ++G +G +S++L+ F + +
Sbjct: 1181 VSINADIVKLVGKAIDFNDNLLLEKFRSENTIKPLIGLNMGPKGKLSRVLNTVFT-PVTH 1239
Query: 209 GSLKGTPV-LGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYN 267
+ P +G TV+ + + Y + K F ++ P+ HS+ P LHN Y
Sbjct: 1240 DLITDKPQGVGQLTVKEINEAY-FQIGGFVEKKFWVVGSPIEHSRSPALHN-----AGYE 1293
Query: 268 GIYVPMFVDDLKK--FFSTYSS----PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVN 321
+ +P D + S Y+ DF G ++ P K +MK+ ++ A+ I A+N
Sbjct: 1294 ALSLPYEFDRFESSDAESVYNKLMLRSDFGGLAITMPLKLDMMKYATKLSDPAKLIGAIN 1353
Query: 322 TIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
TI+ P D +G NTD I ++ K+ G+
Sbjct: 1354 TIV--PIDDGFLGDNTDW----VGITNSFKQSGF 1381
>gi|423084552|ref|ZP_17073052.1| shikimate dehydrogenase [Clostridium difficile 050-P50-2011]
gi|357552122|gb|EHJ33897.1| shikimate dehydrogenase [Clostridium difficile 050-P50-2011]
Length = 287
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
GY G + G+ + GAGGA A+ GAR + IF+
Sbjct: 109 --VGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFN 155
>gi|423081389|ref|ZP_17069997.1| shikimate dehydrogenase [Clostridium difficile 002-P50-2011]
gi|357551055|gb|EHJ32859.1| shikimate dehydrogenase [Clostridium difficile 002-P50-2011]
Length = 287
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
GY G + G+ + GAGGA A+ GAR + IF+
Sbjct: 109 --VGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFN 155
>gi|157694398|ref|YP_001488860.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
gi|157683156|gb|ABV64300.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
Length = 300
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVYGMKAMGA 67
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AGF+V P K V+ + DE+ A+ A NT++ + DGKLIGYNTD
Sbjct: 68 AGFNVSMPNKMKVLNYLDELDDSAKYTRASNTVVNK--DGKLIGYNTDG----------- 114
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
GY G LAG+ L G+GGA +A G R +
Sbjct: 115 --LGYVRNLIEHGVELAGKKVTLVGSGGAATPIAIQLAQSGIREI 157
>gi|254432172|ref|ZP_05045875.1| shikimate 5-dehydrogenase [Cyanobium sp. PCC 7001]
gi|197626625|gb|EDY39184.1| shikimate 5-dehydrogenase [Cyanobium sp. PCC 7001]
Length = 295
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I+A T + G++ PV HS P +HN + + IY+ P +L + D
Sbjct: 5 ISASTALVGVLGDPVRHSLSPAMHNAALAALGLDWIYLALPTPAGELAAVVHALEALDCR 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAV C E+ PLA + AVNT++RR + G L G NTD E + +
Sbjct: 65 GLNVTLPHKEAVAACCAELSPLAARVGAVNTLVRRQAGGWL-GTNTDVEGFLAPLR---- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
+ G A GS R VL G GG+ RA+ G
Sbjct: 120 ----REGHAWQGS----RAVVL-GCGGSARAVVAG 145
>gi|332530766|ref|ZP_08406694.1| shikimate dehydrogenase [Hylemonella gracilis ATCC 19624]
gi|332039799|gb|EGI76197.1| shikimate dehydrogenase [Hylemonella gracilis ATCC 19624]
Length = 289
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 11/144 (7%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
G++ PV HS+ P++H R G YV P+ L + + FAG ++ P+
Sbjct: 9 GVMGWPVRHSRSPVIHGHWIREHGLKGDYVLLPVQPSHLHEALRGLQALGFAGCNLTIPH 68
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
K A + D V PLA I A+NT++ + DG+L+G+NTD E + ++ +A + G++ T
Sbjct: 69 KVAALSMVDRVDPLAARIGAINTLVVK--DGQLLGFNTDAEGYVQSLREA--QPGWRADT 124
Query: 360 ASFGSPLAGRMFVLAGAGGAGRAL 383
P+A + GAGGA RA+
Sbjct: 125 GPHAGPVA-----VLGAGGAARAV 143
>gi|319956443|ref|YP_004167706.1| shikimate dehydrogenase [Nitratifractor salsuginis DSM 16511]
gi|319418847|gb|ADV45957.1| shikimate dehydrogenase [Nitratifractor salsuginis DSM 16511]
Length = 266
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
D ++F + PV HS+ P++HN TF+ ++Y Y +++ ++ + G ++
Sbjct: 2 DRELFAIFGNPVAHSRSPLMHNYTFQTLDYPACYGRYRLEEGERLREVFLKLGLKGANIT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE + CDE+ A+ + AVNTI+ R DGKL GYNTD + +E+
Sbjct: 62 VPHKEHAYRACDELDDFARKVGAVNTIVLR--DGKLHGYNTDAPGFLRVVEE-------- 111
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
FG G+ + GAGG + A + G V I +
Sbjct: 112 -----FG---GGKRVLFLGAGGTAASTAMILREAGYEVTILN 145
>gi|144899674|emb|CAM76538.1| Quinate/Shikimate 5-dehydrogenase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 278
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ K+ G++ PVGHS+ P LH + +G YVP+ V +D F FA
Sbjct: 3 LSGKAKLAGVLGWPVGHSRSPRLHGYWLERLGIDGAYVPLPVRPEDFASVFRALPKMGFA 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDC 339
G +V P+KE + DEV PLA+ I AVNT++ R DG ++G NTD
Sbjct: 63 GANVTVPHKEQALILADEVEPLAKRIGAVNTLVVR-EDGSILGLNTDA 109
>gi|255101876|ref|ZP_05330853.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-63q42]
gi|255307745|ref|ZP_05351916.1| shikimate 5-dehydrogenase [Clostridium difficile ATCC 43255]
gi|423092746|ref|ZP_17080550.1| shikimate dehydrogenase [Clostridium difficile 70-100-2010]
gi|357553616|gb|EHJ35363.1| shikimate dehydrogenase [Clostridium difficile 70-100-2010]
Length = 287
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
GY G + G+ + GAGGA A+ GAR + IF+
Sbjct: 108 -GVGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFN 155
>gi|339443500|ref|YP_004709505.1| hypothetical protein CXIVA_24360 [Clostridium sp. SY8519]
gi|338902901|dbj|BAK48403.1| hypothetical protein CXIVA_24360 [Clostridium sp. SY8519]
Length = 289
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ GLI PV HS P +HN FR + + +Y+ V + L
Sbjct: 4 ITGKTRLTGLIGTPVAHSISPQMHNEAFRTLGLDYVYLAFDVSREHLADAVRGLKEIGIR 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+AV K DE+ P AQ A NT+I DG+LIG+ TD DA++
Sbjct: 64 GFNVTMPHKQAVAKLADELTPAAQIAGACNTVINE--DGRLIGHTTDG----IGFMDAVR 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD 398
+ GY+ + G+ + G GGA A+ A G + + IF+
Sbjct: 118 DAGYE---------ITGKRMTILGCGGASTAICAQAALDGVSSIAIFE 156
>gi|328767672|gb|EGF77721.1| hypothetical protein BATDEDRAFT_13796 [Batrachochytrium dendrobatidis
JAM81]
Length = 1591
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 161/375 (42%), Gaps = 43/375 (11%)
Query: 35 EGADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRL-EA 90
EGA+ +E+R+D + + +P G + ++ LP++ R + GG + D+ + +
Sbjct: 1091 EGANAIELRVDLLESTKPDFVGSQVAMLRHLSKLPIVYTVRTQSQGGRFPDDKTRDMISL 1150
Query: 91 LHLAEDLGADYVDFELKVASNILGKQYSS--HQSGTRFIVSCNLDCETPS-EEDLGYL-V 146
L L LG +Y+D E +++SS G I+ DC + D+ L +
Sbjct: 1151 LELGIRLGCEYIDVEFTAPF----ERFSSITKSKGNSLIIGSYHDCRGVALWTDVCMLDI 1206
Query: 147 SRMQATGADIIKLVFSVNDITEIARIFQL-------LSHCQVPIIAYSVGERGLVSQLLS 199
+ +D IKL+ ++I + + L P+IA ++G G +S++L
Sbjct: 1207 YQDLYAHSDCIKLIGVAHNIADSIAVSTFRNQFVPKLGLAPKPLIALAMGPLGQLSRVL- 1265
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFGLISKPVGHSKGPILH 257
N L + P+L P ++ Q + + H+ K + L KP+ S P+LH
Sbjct: 1266 ---NTYLTPVTHASMPMLAAPGQLTISQIHSIRHLIGMLPKKEYYLFGKPISESMSPVLH 1322
Query: 258 NPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD----FAGFSVGFPYKEAVMK--FCDEVH 311
N F+ + Y + D + + F G SV P K V++ +
Sbjct: 1323 NTGFKQLGLPHHYSLLETDSIDRVREVVQQGKLDGTFGGASVTIPLKIDVIQSGIATRIC 1382
Query: 312 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF 371
A+ I AVNT + +DG+++G+NTD IK+ ++ S + G
Sbjct: 1383 SAAKQIGAVNT-LHMQADGEIVGHNTDW--------IGIKQCIQRHLGVSCSRKVVG--- 1430
Query: 372 VLAGAGGAGRALAFG 386
++ GAGG RA +
Sbjct: 1431 IVLGAGGTARAACYA 1445
>gi|422411890|ref|ZP_16488849.1| shikimate dehydrogenase [Listeria innocua FSL S4-378]
gi|313620437|gb|EFR91825.1| shikimate dehydrogenase [Listeria innocua FSL S4-378]
Length = 308
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 13 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 72
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 73 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 130
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 131 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 168
>gi|321252016|ref|XP_003192257.1| aromatic amino acid family biosynthesis-related protein [Cryptococcus
gattii WM276]
gi|317458725|gb|ADV20470.1| Aromatic amino acid family biosynthesis-related protein, putative
[Cryptococcus gattii WM276]
Length = 1610
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 163/397 (41%), Gaps = 83/397 (20%)
Query: 35 EGADVVEIRLD--CINNFQP-----------GKDLEIILTKKPLPVLIVYRPKWAGGLYE 81
EGAD VE R+D I P K L + LP++ R K GG+
Sbjct: 1111 EGADAVEFRVDLLSITGQAPTGPALPPISFVAKQLASLRLATTLPIVFSVRSKDQGGMVP 1170
Query: 82 GDEHKRLEAL-HLAEDLGADYVDFEL----KVASNILGKQYSSHQSGTRFIVSCNLDCET 136
D + AL L +YVD E+ +V NI+ + +H I++ D
Sbjct: 1171 SDNAEAYGALVRLGLRSACEYVDLEVCWPVQVLDNIVRLKRETH------IIASWHDWTG 1224
Query: 137 PSEEDLGYLVSRMQATG------ADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIA 185
D+ + M+A D+ K+V + + A++ L+ + P++A
Sbjct: 1225 ----DMAWDGEEMKAKHLLCEKYGDVAKIVGTAKSGLDNAKLALLVGEVRSRPGAKPLLA 1280
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT----- 238
++G G +S++L+P TPV LP+ + Q E I A
Sbjct: 1281 INMGAAGQLSRVLNPIL-----------TPVTHDALPSRAAPGQLTAREIIQARALIGFL 1329
Query: 239 --KVFGLISKPVGHSKGPILHNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAG 292
K F L P+ HS P+LHN F + NY ++ VD + SPDF G
Sbjct: 1330 PAKKFVLFGCPIAHSVSPLLHNTGFATLGLPHNYE-LHESEKVD--QDVLEVIRSPDFGG 1386
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
SV P K ++ D V A+ I AVNT+I P GKL G NTD + AI++
Sbjct: 1387 ASVTIPLKLDIIPHLDSVSEDAKIIGAVNTVI--PRGGKLHGENTDWQ--------AIRQ 1436
Query: 353 RGYKN---GTASFGSPLAGRMFVLAGAGGAGRALAFG 386
+N G S GS A ++ GAGG RA +
Sbjct: 1437 AAAQNLDAGALSDGSFTA----LVIGAGGTCRAAIYA 1469
>gi|218547527|ref|YP_002381318.1| shikimate 5-dehydrogenase [Escherichia fergusonii ATCC 35469]
gi|218355068|emb|CAQ87676.1| putative Quinate/shikimate dehydrogenase [Escherichia fergusonii
ATCC 35469]
Length = 287
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ VD +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D + P AQ + AVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVN--DDGILTGHITDGTGYMRALKEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
+ G+ + GAGGA A+ A G + + IF+
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFN 157
>gi|126700322|ref|YP_001089219.1| shikimate 5-dehydrogenase [Clostridium difficile 630]
gi|115251759|emb|CAJ69594.1| Shikimate dehydrogenase 2 [Clostridium difficile 630]
Length = 287
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
GY G + G+ + GAGGA A+ GAR + IF+
Sbjct: 109 --VGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFN 155
>gi|323702295|ref|ZP_08113961.1| shikimate 5-dehydrogenase [Desulfotomaculum nigrificans DSM 574]
gi|333924359|ref|YP_004497939.1| shikimate dehydrogenase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532785|gb|EGB22658.1| shikimate 5-dehydrogenase [Desulfotomaculum nigrificans DSM 574]
gi|333749920|gb|AEF95027.1| Shikimate dehydrogenase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 293
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
IN +TKV GL PV HS P +HN ++ ++ N YVP V L + + A
Sbjct: 6 INGNTKVCGLFGWPVEHSFSPAMHNAAYQRLSLNYTYVPFNVHPASLPQAVQAVRALGLA 65
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V P+K+AV+ D++ AQ I AVNTI+ DGKL+GYNTD
Sbjct: 66 GVNVTVPHKQAVLPLLDQIDAAAQMIGAVNTIVN--VDGKLVGYNTD 110
>gi|288560346|ref|YP_003423832.1| 3-dehydroquinate dehydratase type I AroD [Methanobrevibacter
ruminantium M1]
gi|288543056|gb|ADC46940.1| 3-dehydroquinate dehydratase type I AroD [Methanobrevibacter
ruminantium M1]
Length = 230
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 7/227 (3%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T I P+ + E V+S +GAD++E+R+D + N P EII + P++
Sbjct: 5 TKIAIPIFQKKKEDVISVAQDCIIKGADILELRIDGMENPNPKLVREII-EEINFPIIAT 63
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
R GG ++G + R+ L D+ AD+VD EL+ ++ S ++G + I+S
Sbjct: 64 NRTTREGGFFKGTDKDRIAILRECADV-ADFVDVELQTNRKLI---ESITETGVKTIISY 119
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TP + L +V++ + G DI K+ N++ + + +LSH +A S+GE
Sbjct: 120 HNFKQTPDLDFLIDIVNQEKELG-DIAKIAVMPNNLEDTLTVLAILSHFD-DTVAISMGE 177
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD 237
G +++++ KFN + T G ++++R + IN D
Sbjct: 178 LGSYTRVIASKFNAPFTFAVANDTTAPGQIDIDTMRVLLNSDLINTD 224
>gi|422806705|ref|ZP_16855136.1| shikimate 5-dehydrogenase [Escherichia fergusonii B253]
gi|324112516|gb|EGC06493.1| shikimate 5-dehydrogenase [Escherichia fergusonii B253]
Length = 287
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ VD +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D + P AQ + AVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVN--DDGILTGHITDGTGYMRALKEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
+ G+ + GAGGA A+ A G + + IF+
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFN 157
>gi|443631865|ref|ZP_21116045.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443347980|gb|ELS62037.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 280
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V DDL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKGIRALGIQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT +RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNT-VRREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
P++ F++ GAGGA RA+
Sbjct: 117 --------PISELSFLMIGAGGAARAI 135
>gi|424814987|ref|ZP_18240138.1| shikimate 5-dehydrogenase [Escherichia fergusonii ECD227]
gi|325496007|gb|EGC93866.1| shikimate 5-dehydrogenase [Escherichia fergusonii ECD227]
Length = 287
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ VD +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D + P AQ + AVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVN--DDGILTGHITDGTGYMRALKEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
+ G+ + GAGGA A+ A G + + IF+
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFN 157
>gi|420144673|ref|ZP_14652161.1| Shikimate dehydrogenase [Lactococcus garvieae IPLA 31405]
gi|391856125|gb|EIT66674.1| Shikimate dehydrogenase [Lactococcus garvieae IPLA 31405]
Length = 288
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPD 289
IN T++ ++++P+ HS P +HN F + N +Y+ ++D LK+ + + D
Sbjct: 2 EINGYTRMAAVLAQPIKHSLSPFIHNLAFELTDENAVYLAWELEDEKMLKQTINNVRTLD 61
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI 346
G ++ PYK+ ++F DE+ A+ I AVNTI+ + GKL+GYNTD + +A+
Sbjct: 62 MYGLNISMPYKQKAVEFIDELSEEAELIGAVNTIVNQ--KGKLVGYNTDGQGFFSAL 116
>gi|268679211|ref|YP_003303642.1| shikimate 5-dehydrogenase [Sulfurospirillum deleyianum DSM 6946]
gi|268617242|gb|ACZ11607.1| shikimate 5-dehydrogenase [Sulfurospirillum deleyianum DSM 6946]
Length = 263
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
++F L PV HS P LHN + + +G Y+ ++ + T+ D +G +V P
Sbjct: 2 QLFTLFGYPVTHSISPRLHNAVMQGLGIDGCYIRTPIEHPQTLLPTFRKLDLSGANVTVP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE CDEV +A+ I AVNT+I+ + ++IGYNTD E AI+
Sbjct: 62 HKEVAFAHCDEVRGIAKEIGAVNTLIKEGT--RIIGYNTDAEGFYAAIK----------- 108
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
SFG R ++ GAGG +A+A K+ V I +
Sbjct: 109 --SFGHL---RNALILGAGGTAKAIAMILKAHHVDVTILN 143
>gi|224540929|ref|ZP_03681468.1| hypothetical protein CATMIT_00080 [Catenibacterium mitsuokai DSM
15897]
gi|224526162|gb|EEF95267.1| shikimate dehydrogenase [Catenibacterium mitsuokai DSM 15897]
Length = 296
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 226 RQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFS 283
++T I T ++G+++ P+ HS P++HN F+ + N +Y+ V D L + +
Sbjct: 8 KETVMKNTITGYTGLYGVVANPIKHSFSPMMHNTAFQTLGINDVYLAFEVTKDQLDDYIT 67
Query: 284 TYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASI 343
+ + G+++ PYK+ +MK+ DE+ A+ ++NT+ + +GKLIG+ TD E +
Sbjct: 68 SVKTLPIKGYNISMPYKQDMMKYMDELTTQARLAKSINTV--KNENGKLIGHITDGEGFV 125
Query: 344 TAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
A + G +A V+ GAGGA A+ GA+ ++
Sbjct: 126 MACRNK-------------GWGIAKHKIVVLGAGGAASAIIISLALAGAKEIV 165
>gi|398818042|ref|ZP_10576641.1| shikimate 5-dehydrogenase [Brevibacillus sp. BC25]
gi|398028840|gb|EJL22343.1| shikimate 5-dehydrogenase [Brevibacillus sp. BC25]
Length = 283
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I + TK+ GL PV HS+ P++HN F Y V+ +L+ + +
Sbjct: 2 ITSKTKLVGLFGHPVSHSQSPMMHNTAFSETGLGFAYAAFDVEPENLEDAVAGIRALGLK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V P+K A+M DE+ PLA+ I AVNT++ R DG+LIGYNTD
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTD 106
>gi|313673608|ref|YP_004051719.1| shikimate 5-dehydrogenase [Calditerrivibrio nitroreducens DSM
19672]
gi|312940364|gb|ADR19556.1| shikimate 5-dehydrogenase [Calditerrivibrio nitroreducens DSM
19672]
Length = 263
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
K FGLI KP+ HS P +HN NG Y ++D L + F GF+V
Sbjct: 3 KNFGLIGKPISHSISPKIHNIFLYTNRLNGGYCCFELEDSQLPDVIDLFKKMHFTGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE ++ F D + A+ I AVNT+ + +GKLIGYNTD I I + K
Sbjct: 63 LPYKERIIDFLDGLESDAEKIGAVNTV--KIENGKLIGYNTD----IFGIRETFK----- 111
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
+ L+ ++ V+ GAGGA R L + ++ +I
Sbjct: 112 ----FYNVDLSKKVIVVLGAGGAARGLLYELRNHDYEELI 147
>gi|449051287|ref|ZP_21731886.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae hvKP1]
gi|448876275|gb|EMB11269.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae hvKP1]
Length = 251
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
V NIT + T+IC PL+ ++++++L N + GAD++E R+D + + L
Sbjct: 7 VKNITFQEGVTLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVDHFAQVREMAQVMAAL 66
Query: 61 TK-----KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
+ K LP+L +R K GG E + A G D +D EL + I
Sbjct: 67 AEIRGALKALPLLFTFRSKKEGGETELSDEAYFALNREAARSGLVDVIDIELFNDEAQIR 126
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 127 ALVDDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 186
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 187 AATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKLREV 246
Query: 229 YKV 231
+
Sbjct: 247 MDI 249
>gi|422414971|ref|ZP_16491928.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
gi|313624974|gb|EFR94873.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
Length = 301
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|167747177|ref|ZP_02419304.1| hypothetical protein ANACAC_01891 [Anaerostipes caccae DSM 14662]
gi|317473620|ref|ZP_07932909.1| shikimate 5-dehydrogenase [Anaerostipes sp. 3_2_56FAA]
gi|167654137|gb|EDR98266.1| shikimate dehydrogenase [Anaerostipes caccae DSM 14662]
gi|316898910|gb|EFV20935.1| shikimate 5-dehydrogenase [Anaerostipes sp. 3_2_56FAA]
Length = 289
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I T++ GLI PVGHS P +HN F+ + + Y+ + D +K S + +
Sbjct: 4 RIKGTTRLLGLIGSPVGHSGSPAMHNYGFQALGIDAAYLAFDIKEDQVKDAISAVRTLNM 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K K+ DE+ P A+ I AVNT++ R DGKL G+ TD E + ++D
Sbjct: 64 QGLNVTMPCKTEAAKYMDELSPAARLIGAVNTVVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + + V+ GAGGA A+ GA V
Sbjct: 120 -----------HGVSIGKKDIVIFGAGGAATAILVQCALDGANSV 153
>gi|365851582|ref|ZP_09392012.1| putative shikimate dehydrogenase [Lactobacillus parafarraginis
F0439]
gi|363716614|gb|EHM00015.1| putative shikimate dehydrogenase [Lactobacillus parafarraginis
F0439]
Length = 290
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ T ++G I+ P HS P++HN +FR + N Y+ + D L+ + +
Sbjct: 2 MDGHTTLYGFIAHPAAHSLSPLIHNTSFRALGINAAYLAFDINTDTLEVMVAAIRAMGIG 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K V+ D V P A+ + AVNTII R DG+L G TD + + A+E
Sbjct: 62 GMNLSLPLKTDVIPLLDAVTPRAKRLNAVNTIINR--DGQLTGDTTDGQGFVDALE---- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
Y+ G +AG+ + GAGGAGR++
Sbjct: 116 ---YQ------GIQIAGKRLTILGAGGAGRSI 138
>gi|329114276|ref|ZP_08243038.1| Shikimate dehydrogenase [Acetobacter pomorum DM001]
gi|326696352|gb|EGE48031.1| Shikimate dehydrogenase [Acetobacter pomorum DM001]
Length = 288
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS 287
K + I K+ G++ PV HS+ P+LHN R +G YVP+ V D +
Sbjct: 8 KPQIITGKAKLAGVLGWPVAHSRSPVLHNYWLRRYEVDGAYVPLPVEPDAFVAAVLGLQA 67
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
F G ++ P+KEA K D + AQ AVNT++ DGK+ GY+TD + ++E
Sbjct: 68 AGFRGANITIPHKEAAFKIADVLDHSAQRAGAVNTLVFE-DDGKIHGYSTDGAGFVASME 126
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
+A F P ++ +L GAGGA R++A + G RV +
Sbjct: 127 -----------SAGFNLPEQAQVLLL-GAGGAARSVAAALQDCGLRVAV 163
>gi|254976300|ref|ZP_05272772.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-66c26]
gi|255093686|ref|ZP_05323164.1| shikimate 5-dehydrogenase [Clostridium difficile CIP 107932]
gi|255315436|ref|ZP_05357019.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-76w55]
gi|255518101|ref|ZP_05385777.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-97b34]
gi|255651217|ref|ZP_05398119.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-37x79]
gi|260684282|ref|YP_003215567.1| shikimate 5-dehydrogenase [Clostridium difficile CD196]
gi|260687941|ref|YP_003219075.1| shikimate 5-dehydrogenase [Clostridium difficile R20291]
gi|384361925|ref|YP_006199777.1| shikimate 5-dehydrogenase [Clostridium difficile BI1]
gi|260210445|emb|CBA64887.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile
CD196]
gi|260213958|emb|CBE06042.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile
R20291]
Length = 287
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
GY G + G+ + GAGGA A+ GAR + IF+
Sbjct: 109 --VGYVRNLKENGIEVKGKKITIMGAGGAATAIQVQCALDGAREISIFN 155
>gi|194016640|ref|ZP_03055254.1| shikimate dehydrogenase [Bacillus pumilus ATCC 7061]
gi|194012113|gb|EDW21681.1| shikimate dehydrogenase [Bacillus pumilus ATCC 7061]
Length = 300
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVYGMKAMGA 67
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AGF+V P K V+ + DE+ A+ A NT++ + DGKLIGYNTD
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSARYTRASNTVVNK--DGKLIGYNTDG----------- 114
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
GY G LAG+ L G+GGA +A G R +
Sbjct: 115 --LGYVRNLIEHGVELAGQKVTLVGSGGAATPIAIQLAQSGIREI 157
>gi|313143454|ref|ZP_07805647.1| shikimate 5-dehydrogenase [Helicobacter cinaedi CCUG 18818]
gi|313128485|gb|EFR46102.1| shikimate 5-dehydrogenase [Helicobacter cinaedi CCUG 18818]
gi|396080087|dbj|BAM33463.1| shikimate 5-dehydrogenase [Helicobacter cinaedi ATCC BAA-847]
Length = 263
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
+ F + P+ HSK P+LHN TF N Y + +++ K ++ + +G ++ P
Sbjct: 3 RFFAVYGNPIAHSKSPLLHNHTFSRCAINAFYGRLLLENGKDLRESFKTHHLSGANITIP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE + CD V +A+ I A NT +R +GK+IGYNTD + +++D +K
Sbjct: 63 FKEEAYRQCDLVCGIAKEIGACNTWVRE--NGKIIGYNTDAQGFYESVKD------FKMS 114
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
A ++ GAGG+ +A+A K+ I +
Sbjct: 115 NA-----------LILGAGGSAKAVAMILKTHNISTTIIN 143
>gi|325570234|ref|ZP_08146100.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
gi|325156717|gb|EGC68891.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
Length = 292
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 6 QMITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLD 65
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 66 LLGVNLSMPHKMAAVPLMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED- 122
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ G+ + GAGGA A+ A G + +
Sbjct: 123 ------------IQVSIIGKTMTVIGAGGAATAIISQAALDGVKTI 156
>gi|331092180|ref|ZP_08341010.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401952|gb|EGG81526.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
I+ T + GL+ PV HS P++HN +FR + N IY+ VD L+ + +
Sbjct: 4 QIDGHTILTGLLGSPVSHSISPLMHNESFRQLGLNYIYLAFDVDVNRLETAVEGLRALNV 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF++ P K + + CD++ P A+ AVNT++ DG L GY TD + ++++A
Sbjct: 64 RGFNLTMPNKNEMCRLCDKLSPAAKISGAVNTVVN--DDGVLTGYTTDGIGYMQSLKEA- 120
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + G+ + GAGGA A+ A G R +
Sbjct: 121 ------------GHDIIGKKMTMLGAGGASTAILVQAALDGVREI 153
>gi|315301589|ref|ZP_07872696.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
gi|313630036|gb|EFR98062.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|425079838|ref|ZP_18482935.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428931500|ref|ZP_19005095.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae JHCK1]
gi|405606763|gb|EKB79733.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|426307999|gb|EKV70070.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae JHCK1]
Length = 251
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
V NIT + T+IC PL+ ++++++L N + GAD++E R+D + + L
Sbjct: 7 VKNITFQEGETLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVDHFAQVREMAQVMAAL 66
Query: 61 TK-----KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
+ K LP+L +R K GG E + A G D +D EL + I
Sbjct: 67 AEIRGALKALPLLFTFRSKKEGGETELSDEAYFALNREAARSGLVDVIDIELFNNEAQIR 126
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 127 ALVDDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 186
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 187 AATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKLREV 246
Query: 229 YKV 231
+
Sbjct: 247 MDI 249
>gi|289433772|ref|YP_003463644.1| hypothetical protein lse_0405 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170016|emb|CBH26556.1| aroE-1 [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|347447766|pdb|3TOZ|A Chain A, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447767|pdb|3TOZ|B Chain B, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447768|pdb|3TOZ|C Chain C, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447769|pdb|3TOZ|D Chain D, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447770|pdb|3TOZ|E Chain E, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447771|pdb|3TOZ|F Chain F, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447772|pdb|3TOZ|G Chain G, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447773|pdb|3TOZ|H Chain H, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347948704|pdb|3TNL|A Chain A, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948705|pdb|3TNL|B Chain B, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948706|pdb|3TNL|C Chain C, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948707|pdb|3TNL|D Chain D, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad
Length = 315
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 30 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 89
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 90 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 147
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 148 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 185
>gi|296121797|ref|YP_003629575.1| 3-dehydroquinate dehydratase [Planctomyces limnophilus DSM 3776]
gi|296014137|gb|ADG67376.1| 3-dehydroquinate dehydratase-like protein [Planctomyces limnophilus
DSM 3776]
Length = 485
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 173/404 (42%), Gaps = 47/404 (11%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC + +S + ++ A A +D+VE+ C++ D++ ++ P+L+
Sbjct: 1 MICISVTPESRQLAKVDILNA-ARQSDLVEL---CLDRLLKEPDVKDLIESSKKPILVSC 56
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGK--QYSSHQSGTRFI 127
R GG ++G E +R++ L A G YV+ + ++A I GK + S+ S R +
Sbjct: 57 RSAENGGSWKGTEDERIQLLRQAILAGPAYVELDEEIAKKIPRFGKVQRVISYTSMNRPL 116
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ-VPIIAY 186
DL AD+IK + + + + ++S + +P++
Sbjct: 117 ------------HDLEEAFENAGILQADVIKFTWPTDLLEAAWPLLSVVSQKRAIPVVGL 164
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL-KGTPV-LGLPTVESLRQTYKVEHINADTKVFGLI 244
+G+ GL LL K+ +Y +L KG +G PTV L Y+ I T+ ++
Sbjct: 165 GLGKSGLTFSLLGRKYGSPWIYAALEKGMEAFVGQPTVSELDDVYRWRQIGPKTRFIAVV 224
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSP-----DFAGFSVG 296
+G + + N F +++ N +P+ VD + K P ++A V
Sbjct: 225 GFGLGETMLCKILNAGFDNLDLNTRCLPIEFRSVDSIPKMLDILKIPGVIATNYASRRV- 283
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
FP A DEV +++ A + I+RP DG +N + ++ +E+ + G
Sbjct: 284 FPIASA----QDEVSAISK---AGDLYIKRP-DG-WASHNLIWKTALRLLEETLGRTGPD 334
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400
+ PL + ++ G GG +LA G K R V I D
Sbjct: 335 D------RPLDRKNVMVVGKGGLAASLAVGIKKRNGLVSICSAD 372
>gi|238893051|ref|YP_002917785.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238545367|dbj|BAH61718.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 292
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 225 LRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFF 282
+R E I T++ GLI+ P+ HS P +HN F ++ + +Y+ V +LK
Sbjct: 1 MRIFVMAERITGHTELIGLIATPIRHSMSPTMHNEAFAYLGLDYVYLAFEVGNQELKDVV 60
Query: 283 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 342
+ + GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD
Sbjct: 61 QGFRAMKLRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGY 118
Query: 343 ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ A+ +A G + G+ + GAGGA AL A G + +
Sbjct: 119 MRALSEA-------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAI 158
>gi|365142633|ref|ZP_09347749.1| 3-dehydroquinate dehydratase [Klebsiella sp. 4_1_44FAA]
gi|386033132|ref|YP_005953045.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae KCTC 2242]
gi|402782450|ref|YP_006637996.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|424828933|ref|ZP_18253661.1| 3-dehydroquinate dehydratase, type I [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425078405|ref|ZP_18481508.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425089037|ref|ZP_18492130.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425089956|ref|ZP_18493041.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|172052497|sp|A6T4L2.2|AROD_KLEP7 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|339760260|gb|AEJ96480.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae KCTC 2242]
gi|363651415|gb|EHL90483.1| 3-dehydroquinate dehydratase [Klebsiella sp. 4_1_44FAA]
gi|402543308|gb|AFQ67457.1| 3-dehydroquinate dehydratase I [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405590266|gb|EKB63800.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405600175|gb|EKB73342.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405614520|gb|EKB87219.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|414706349|emb|CCN28053.1| 3-dehydroquinate dehydratase, type I [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 251
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
V NIT + T+IC PL+ ++++++L N + GAD++E R+D + + L
Sbjct: 7 VKNITFQEGETLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVDHFAQVREMAQVMAAL 66
Query: 61 TK-----KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
+ K LP+L +R K GG E + A G D +D EL + I
Sbjct: 67 AEIRGALKALPLLFTFRSKKEGGETELSDEAYFALNREAARSGLVDVIDIELFNDEAQIR 126
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 127 ALVDDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 186
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 187 AATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKLREV 246
Query: 229 YKV 231
+
Sbjct: 247 MDI 249
>gi|16802533|ref|NP_464018.1| shikimate 5-dehydrogenase [Listeria monocytogenes EGD-e]
gi|46906736|ref|YP_013125.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093115|ref|ZP_00230891.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 4b H7858]
gi|116871881|ref|YP_848662.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|226223116|ref|YP_002757223.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254824236|ref|ZP_05229237.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|254853859|ref|ZP_05243207.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|254933245|ref|ZP_05266604.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|254992917|ref|ZP_05275107.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-064]
gi|255026373|ref|ZP_05298359.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-003]
gi|255522129|ref|ZP_05389366.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-175]
gi|284800765|ref|YP_003412630.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284993951|ref|YP_003415719.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|290894365|ref|ZP_06557329.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|300765141|ref|ZP_07075127.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|386042817|ref|YP_005961622.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|386049417|ref|YP_005967408.1| shikimate dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|386731259|ref|YP_006204755.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404280041|ref|YP_006680939.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404282928|ref|YP_006683825.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|404285853|ref|YP_006692439.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404406955|ref|YP_006689670.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|404409722|ref|YP_006695310.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|405748855|ref|YP_006672321.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|405751719|ref|YP_006675184.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|405754575|ref|YP_006678039.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|405757484|ref|YP_006686760.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|406703270|ref|YP_006753624.1| shikimate 5-dehydrogenase [Listeria monocytogenes L312]
gi|417314539|ref|ZP_12101236.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|417316779|ref|ZP_12103412.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1-220]
gi|424713379|ref|YP_007014094.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424822233|ref|ZP_18247246.1| Shikimate dehydrogenase [Listeria monocytogenes str. Scott A]
gi|24211508|sp|Q8Y9N5.1|AROE_LISMO RecName: Full=Shikimate dehydrogenase
gi|67460331|sp|Q723F9.1|AROE_LISMF RecName: Full=Shikimate dehydrogenase
gi|16409866|emb|CAC98569.1| lmo0490 [Listeria monocytogenes EGD-e]
gi|46880001|gb|AAT03302.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47018488|gb|EAL09245.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 4b H7858]
gi|116740759|emb|CAK19879.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|225875578|emb|CAS04281.1| Putative shikimate 5-dehydrogenase [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258607244|gb|EEW19852.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|284056327|gb|ADB67268.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284059418|gb|ADB70357.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|290556072|gb|EFD89622.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|293584805|gb|EFF96837.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|293593469|gb|EFG01230.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|300514112|gb|EFK41173.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|328467560|gb|EGF38622.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|328475795|gb|EGF46531.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1-220]
gi|332310913|gb|EGJ24008.1| Shikimate dehydrogenase [Listeria monocytogenes str. Scott A]
gi|345536051|gb|AEO05491.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|346423263|gb|AEO24788.1| shikimate dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|384390017|gb|AFH79087.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404218055|emb|CBY69419.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|404220919|emb|CBY72282.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|404223775|emb|CBY75137.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|404226676|emb|CBY48081.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404229548|emb|CBY50952.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|404232430|emb|CBY53833.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|404235366|emb|CBY56768.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|404241104|emb|CBY62504.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|404244782|emb|CBY03007.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406360300|emb|CBY66573.1| shikimate 5-dehydrogenase [Listeria monocytogenes L312]
gi|424012563|emb|CCO63103.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|422408579|ref|ZP_16485540.1| shikimate dehydrogenase [Listeria monocytogenes FSL F2-208]
gi|313610573|gb|EFR85686.1| shikimate dehydrogenase [Listeria monocytogenes FSL F2-208]
Length = 298
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 13 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 72
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 73 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 130
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 131 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 168
>gi|422421064|ref|ZP_16498017.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313639412|gb|EFS04281.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|47094716|ref|ZP_00232331.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 1/2a F6854]
gi|254911162|ref|ZP_05261174.1| shikimate 5-dehydrogenase [Listeria monocytogenes J2818]
gi|254935490|ref|ZP_05267187.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|386046141|ref|YP_005964473.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
gi|47016856|gb|EAL07774.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 1/2a F6854]
gi|258608067|gb|EEW20675.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|293589089|gb|EFF97423.1| shikimate 5-dehydrogenase [Listeria monocytogenes J2818]
gi|345533132|gb|AEO02573.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|434396815|ref|YP_007130819.1| Shikimate dehydrogenase [Stanieria cyanosphaera PCC 7437]
gi|428267912|gb|AFZ33853.1| Shikimate dehydrogenase [Stanieria cyanosphaera PCC 7437]
Length = 288
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN + + +Y+P V ++L + +++ D
Sbjct: 4 ITGATKLLGIIGDPVEHSLSPVMHNAAIEQMGIDYVYIPFPVKPNNLAIAIAGFATIDLI 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ EV P A+ I AVNT+ R + G NTD + +++
Sbjct: 64 GFSVTIPHKQAIIPLLSEVTPEAEMIGAVNTVWRTKVGWQ--GTNTDVIGFVAPLQNL-- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
ER + T V+ G GGA RA+ G G +
Sbjct: 120 ERNWHQVTP-----------VILGNGGAARAVIVGLIQLGCQ 150
>gi|428301034|ref|YP_007139340.1| shikimate dehydrogenase [Calothrix sp. PCC 6303]
gi|428237578|gb|AFZ03368.1| shikimate dehydrogenase [Calothrix sp. PCC 6303]
Length = 306
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 288
++ I TK+ G+I PVGHS P++HN + + +Y+P + +L+ + +++
Sbjct: 12 LKMITGTTKLLGVIGDPVGHSLSPLMHNAAINTLGLDYVYLPFPIKPHNLRDAIACFAAI 71
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
GFSV P+K+A++ F EV LA+ + AVNT+ + D +G NTD I+ ++
Sbjct: 72 GVLGFSVTIPHKQAIIPFLSEVSDLAKVVGAVNTVFYQ--DHHWVGTNTDVTGFISPLK- 128
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ + V+ G GGA RA+ G G
Sbjct: 129 -----------TTYNRDWSQTSVVILGNGGAARAIVVGCTELG 160
>gi|418027899|ref|ZP_12666499.1| Shikimate dehydrogenase [Streptococcus thermophilus CNCM I-1630]
gi|354689290|gb|EHE89293.1| Shikimate dehydrogenase [Streptococcus thermophilus CNCM I-1630]
Length = 285
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F + NG+YV + DL + +
Sbjct: 3 IDGHTRLAAVVASPIKHSISPFIHNLAFEKTHVNGVYVAWEIPESDLAETVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ F D + P AQ I AVNT++ R DG+LIG+NTD ++++
Sbjct: 63 GINLSMPYKEKVIPFLDGLSPEAQLIGAVNTVVNR--DGRLIGHNTDGFGFFASLKNF-- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+P + +L GAGGA +++ A GA+ V
Sbjct: 119 ------------NPKDTHIMIL-GAGGAAKSIVTQAVLDGAKKV 149
>gi|315645929|ref|ZP_07899050.1| shikimate 5-dehydrogenase [Paenibacillus vortex V453]
gi|315278690|gb|EFU42004.1| shikimate 5-dehydrogenase [Paenibacillus vortex V453]
Length = 286
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I D + G++ P+GHSK P +HN + +G YVP+ V + L + + F
Sbjct: 7 IERDYLLLGVMGDPIGHSKSPAMHNAAITALGLSGAYVPLHVRPEGLGEAIQAVKALGFR 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VMK+ D V A+ I AVNTI+ +G L GYNTD + +++D
Sbjct: 67 GVNVTIPHKVEVMKYLDVVDEGARQIGAVNTIVN--DNGTLKGYNTDGIGYVRSLKD--- 121
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
L G+ V+ GAGGA R + +
Sbjct: 122 ---------EACPDLKGKRIVVLGAGGAARGIIY 146
>gi|427393579|ref|ZP_18887357.1| shikimate 5-dehydrogenase [Alloiococcus otitis ATCC 51267]
gi|425730580|gb|EKU93415.1| shikimate 5-dehydrogenase [Alloiococcus otitis ATCC 51267]
Length = 430
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 21/156 (13%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
+GLI + HSK +H F + +Y + +P DL+ F S F G +V PYK
Sbjct: 20 YGLIGASLSHSKSQEIHE-AFGYYSYRLVNIP--AQDLEAFMKQRS---FKGINVTIPYK 73
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E VM + D V P AQ I AVNTI+ + +G L+GYNTD G+ +
Sbjct: 74 ETVMYYLDYVDPRAQEIGAVNTIVNQ--NGHLLGYNTDY-------------LGFAHSLK 118
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
++G L G+ ++ G+GGA + + AK A+ +I
Sbjct: 119 AYGIHLKGKKVMVLGSGGASKMVQTYAKDHSAQEII 154
>gi|16799568|ref|NP_469836.1| shikimate 5-dehydrogenase [Listeria innocua Clip11262]
gi|423099588|ref|ZP_17087295.1| shikimate dehydrogenase [Listeria innocua ATCC 33091]
gi|24211466|sp|Q92EG7.1|AROE_LISIN RecName: Full=Shikimate dehydrogenase
gi|16412933|emb|CAC95725.1| lin0493 [Listeria innocua Clip11262]
gi|370793944|gb|EHN61747.1| shikimate dehydrogenase [Listeria innocua ATCC 33091]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|411120996|ref|ZP_11393368.1| shikimate dehydrogenase [Oscillatoriales cyanobacterium JSC-12]
gi|410709665|gb|EKQ67180.1| shikimate dehydrogenase [Oscillatoriales cyanobacterium JSC-12]
Length = 286
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G++ P+ HS PI+HN + + +Y+P V +DL + + +++
Sbjct: 2 ITGTTKLLGVVGHPIEHSLSPIMHNAAIAQLGVDYVYLPFPVKPEDLSQALAGFAAIGVQ 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+++M+ ++ PLAQA+ AVNT+ R S+ G NTD
Sbjct: 62 GFNVTIPHKQSIMRLLSDISPLAQAVGAVNTVWR--SETGWHGTNTDVA----------- 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
G+ S + + ++ G GGA RA+ G G
Sbjct: 109 --GFLAPLRSLRADWSQTEVLILGIGGAARAVVAGCAELG 146
>gi|386052745|ref|YP_005970303.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
gi|346645396|gb|AEO38021.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|428280059|ref|YP_005561794.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. natto BEST195]
gi|291485016|dbj|BAI86091.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. natto BEST195]
Length = 280
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V DDL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT +RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNT-VRREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
P++ F++ GAGGA RA+
Sbjct: 117 --------PISELSFLMIGAGGAARAI 135
>gi|254829415|ref|ZP_05234102.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
gi|258601829|gb|EEW15154.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|33864521|ref|NP_896081.1| shikimate 5-dehydrogenase [Prochlorococcus marinus str. MIT 9313]
gi|33641301|emb|CAE22431.1| Shikimate / quinate 5-dehydrogenase [Prochlorococcus marinus str.
MIT 9313]
Length = 303
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I+ T + GL+ +PV HS P++ N +N + Y+ P +DL S +
Sbjct: 2 ISGTTSLIGLLGQPVHHSLSPVMQNAALAAMNLDWCYMAMPCETNDLANVLCALRSINCL 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+K+ V K C E+ PLA+ + AVNT+I +DG G NTD I ++++
Sbjct: 62 GLNITIPHKQDVAKTCRELSPLAKRLKAVNTLIPH-ADGGWTGTNTDVAGFIAPLQESKC 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
E GR V+ G GG+ RA+ G
Sbjct: 121 E-------------WHGRRAVVLGCGGSARAVVAG 142
>gi|422417941|ref|ZP_16494896.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL N1-067]
gi|313634787|gb|EFS01220.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL N1-067]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGRTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|296333275|ref|ZP_06875728.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675221|ref|YP_003866893.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149473|gb|EFG90369.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413465|gb|ADM38584.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 280
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + ++ +G Y V DDL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLSLDGHYHAFKVEEDDLEDAVKGIRALGVHGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT +RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDDSAKVIGAVNT-VRREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
P++ F++ GAGGA RA+
Sbjct: 117 --------PISELSFLMIGAGGAARAI 135
>gi|255022416|ref|ZP_05294402.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-208]
gi|422808610|ref|ZP_16857021.1| Shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
gi|378752224|gb|EHY62809.1| Shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
Length = 291
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|423127375|ref|ZP_17115054.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca 10-5250]
gi|376394414|gb|EHT07064.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca 10-5250]
Length = 251
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL---- 56
V NIT + T+IC PL+ +++ ++ +N + GAD++E R+D + + +
Sbjct: 7 VKNITFQEGETLICVPLIGKTLAELQTNARELATAGADIIEWRVDHFTQVRETEQVLLAL 66
Query: 57 -EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
EI K +P+L +R K GG E + E A G D +D EL + I
Sbjct: 67 GEIRQLLKEMPLLFTFRSKKEGGETEISDEAYFELNRRAAVSGLTDVIDIELFNDEAQIR 126
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 127 SLVSDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 186
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 187 SATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAITQLREL 246
Query: 229 YKV 231
+
Sbjct: 247 MDI 249
>gi|345515156|ref|ZP_08794662.1| shikimate 5-dehydrogenase [Bacteroides dorei 5_1_36/D4]
gi|229434416|gb|EEO44493.1| shikimate 5-dehydrogenase [Bacteroides dorei 5_1_36/D4]
Length = 246
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGF 297
K +GLI P+GHS N F N + YV + +K+ S ++PD GF+V
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGFNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A AI AVN I+R+ KLIGYN+D +I D + E +
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTKLIGYNSDVIGFTQSI-DPLLEPQH 120
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
K ++ G GGA +A+A+G K G
Sbjct: 121 KKA-------------LILGTGGASKAIAYGLKKLG 143
>gi|329925883|ref|ZP_08280593.1| shikimate dehydrogenase [Paenibacillus sp. HGF5]
gi|328939534|gb|EGG35883.1| shikimate dehydrogenase [Paenibacillus sp. HGF5]
Length = 286
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFS 294
D + G++ P+GHSK P +H+ + +G YVP+ + L + F G +
Sbjct: 8 DYLLLGVMGDPIGHSKSPAMHDAAINALGLSGAYVPLHIRPQGLGDAIQAVKALGFRGVN 67
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+K VMK+ D V AQ I AVNTI+ +GKL GYNTD + +++D
Sbjct: 68 VTIPHKVEVMKYLDVVDEGAQRIGAVNTIVN--DNGKLTGYNTDGIGYVRSLKD------ 119
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
L G+ V+ GAGGA R + +
Sbjct: 120 ------EACPDLKGKRIVVIGAGGAARGIIY 144
>gi|212694466|ref|ZP_03302594.1| hypothetical protein BACDOR_03994 [Bacteroides dorei DSM 17855]
gi|237711195|ref|ZP_04541676.1| shikimate 5-dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|265750787|ref|ZP_06086850.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|423228191|ref|ZP_17214597.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T00C15]
gi|423239305|ref|ZP_17220421.1| shikimate 5-dehydrogenase [Bacteroides dorei CL03T12C01]
gi|423243454|ref|ZP_17224530.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T12C06]
gi|212662967|gb|EEB23541.1| putative shikimate dehydrogenase [Bacteroides dorei DSM 17855]
gi|229455039|gb|EEO60760.1| shikimate 5-dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|263237683|gb|EEZ23133.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|392636974|gb|EIY30852.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T00C15]
gi|392645207|gb|EIY38939.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T12C06]
gi|392647092|gb|EIY40798.1| shikimate 5-dehydrogenase [Bacteroides dorei CL03T12C01]
Length = 246
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGF 297
K +GLI P+GHS N F N + YV + +K+ S ++PD GF+V
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGFNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A AI AVN I+R+ KLIGYN+D +I D + E +
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTKLIGYNSDVIGFTQSI-DPLLEPQH 120
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
K ++ G GGA +A+A+G K G
Sbjct: 121 KKA-------------LILGTGGASKAIAYGLKKLG 143
>gi|306521064|ref|ZP_07407411.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-32g58]
Length = 273
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
GY G + G+ + GAGGA A+ GAR + IF+
Sbjct: 109 --VGYVRNLKENGIEVKGKKITIMGAGGAATAIQVQCALDGAREISIFN 155
>gi|420263280|ref|ZP_14765918.1| shikimate dehydrogenase [Enterococcus sp. C1]
gi|394769568|gb|EJF49413.1| shikimate dehydrogenase [Enterococcus sp. C1]
Length = 289
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 3 QMITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLD 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 63 LLGVNLSMPHKMAAVPLMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED- 119
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ G+ + GAGGA A+ A G + +
Sbjct: 120 ------------IQVSIIGKTMTVIGAGGAATAIISQAALDGVKTI 153
>gi|161611289|ref|YP_139160.2| shikimate 5-dehydrogenase [Streptococcus thermophilus LMG 18311]
gi|161936372|ref|YP_141050.2| shikimate 5-dehydrogenase [Streptococcus thermophilus CNRZ1066]
Length = 285
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F + NG+YV + DL + +
Sbjct: 3 IDGHTRLAAVVASPIKHSISPFIHNLAFEKTHVNGVYVAWEIPESDLAETVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ F D + P AQ I AVNT++ R DG+LIG+NTD ++++
Sbjct: 63 GINLSMPYKEKVIPFLDGLSPEAQLIGAVNTVVNR--DGRLIGHNTDGFGFFASLKNF-- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+P + +L GAGGA +++ A GA+ V
Sbjct: 119 ------------NPKDTHIMIL-GAGGAAKSIVTQAVLDGAKKV 149
>gi|55736703|gb|AAV60345.1| shikimate 5-dehydrogenase [Streptococcus thermophilus LMG 18311]
gi|55738594|gb|AAV62235.1| shikimate 5-dehydrogenase [Streptococcus thermophilus CNRZ1066]
Length = 298
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F + NG+YV + DL + +
Sbjct: 16 IDGHTRLAAVVASPIKHSISPFIHNLAFEKTHVNGVYVAWEIPESDLAETVENIRRYNMF 75
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ F D + P AQ I AVNT++ R DG+LIG+NTD ++++
Sbjct: 76 GINLSMPYKEKVIPFLDGLSPEAQLIGAVNTVVNR--DGRLIGHNTDGFGFFASLKNF-- 131
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+P + +L GAGGA +++ A GA+ V
Sbjct: 132 ------------NPKDTHIMIL-GAGGAAKSIVTQAVLDGAKKV 162
>gi|402782448|ref|YP_006637994.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|402543306|gb|AFQ67455.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae 1084]
Length = 287
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F ++ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAYLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + G+ + GAGGA AL A G + +
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAI 153
>gi|116627524|ref|YP_820143.1| shikimate 5-dehydrogenase [Streptococcus thermophilus LMD-9]
gi|386086330|ref|YP_006002204.1| shikimate 5-dehydrogenase [Streptococcus thermophilus ND03]
gi|387909422|ref|YP_006339728.1| shikimate 5-dehydrogenase [Streptococcus thermophilus MN-ZLW-002]
gi|122267878|sp|Q03LH5.1|AROE_STRTD RecName: Full=Shikimate dehydrogenase
gi|116100801|gb|ABJ65947.1| shikimate dehydrogenase [Streptococcus thermophilus LMD-9]
gi|312278043|gb|ADQ62700.1| Shikimate 5-dehydrogenase [Streptococcus thermophilus ND03]
gi|387574357|gb|AFJ83063.1| shikimate 5-dehydrogenase [Streptococcus thermophilus MN-ZLW-002]
Length = 285
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F + NG+YV + DL + +
Sbjct: 3 IDGHTRLAAVVASPIKHSISPFIHNLAFEKTHVNGVYVAWEIPESDLAETVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ F D + P AQ I AVNT++ R DG+LIG+NTD ++++
Sbjct: 63 GINLSMPYKEKVIPFLDGLSPEAQLIGAVNTVVNR--DGRLIGHNTDGFGFFASLKNF-- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+P + +L GAGGA +++ A GA+ V
Sbjct: 119 ------------NPKDTHIMIL-GAGGAAKSIVTQAVLDGAKKV 149
>gi|445374347|ref|ZP_21426395.1| shikimate 5-dehydrogenase [Streptococcus thermophilus MTCC 5460]
gi|445388853|ref|ZP_21428111.1| shikimate 5-dehydrogenase [Streptococcus thermophilus MTCC 5461]
gi|444750601|gb|ELW75403.1| shikimate 5-dehydrogenase [Streptococcus thermophilus MTCC 5461]
gi|444750697|gb|ELW75493.1| shikimate 5-dehydrogenase [Streptococcus thermophilus MTCC 5460]
Length = 284
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F + NG+YV + DL + +
Sbjct: 3 IDGHTRLAAVVASPIKHSISPFIHNLAFEKTHVNGVYVAWEIPESDLAETVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ F D + P AQ I AVNT++ R DG+LIG+NTD ++++
Sbjct: 63 GINLSMPYKEKVIPFLDGLSPEAQLIGAVNTVVNR--DGRLIGHNTDGFGFFASLKNF-- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+P + +L GAGGA +++ A GA+ V
Sbjct: 119 ------------NPKDTHIMIL-GAGGAAKSIVTQAVLDGAKKV 149
>gi|152968654|ref|YP_001333763.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262044890|ref|ZP_06017932.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012032|ref|ZP_08307249.1| 3-dehydroquinate dehydratase, type I [Klebsiella sp. MS 92-3]
gi|424935108|ref|ZP_18353480.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|150953503|gb|ABR75533.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259037617|gb|EEW38846.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534021|gb|EGF60673.1| 3-dehydroquinate dehydratase, type I [Klebsiella sp. MS 92-3]
gi|407809295|gb|EKF80546.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
Length = 255
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
V NIT + T+IC PL+ ++++++L N + GAD++E R+D + + L
Sbjct: 11 VKNITFQEGETLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVDHFAQVREMAQVMAAL 70
Query: 61 TK-----KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
+ K LP+L +R K GG E + A G D +D EL + I
Sbjct: 71 AEIRGALKALPLLFTFRSKKEGGETELSDEAYFALNREAARSGLVDVIDIELFNDEAQIR 130
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 131 ALVDDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 190
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 191 AATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKLREV 250
Query: 229 YKV 231
+
Sbjct: 251 MDI 253
>gi|385305706|gb|EIF49660.1| pentafunctional arom polypeptide [Dekkera bruxellensis AWRI1499]
Length = 1526
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 143/317 (45%), Gaps = 24/317 (7%)
Query: 36 GADVVEIRLD-CINNFQPGKDLEIILTK--KPLPVLIVYRPKWAGGLY-EGDEHKRLEAL 91
G + VE+R+D + + L++ L + LP++ R + GG + + D E +
Sbjct: 1043 GCNAVELRVDRLVAHDTDSVALQVGLLRMYTBLPIIFTVRTQSQGGSFPDADTDSLAELV 1102
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN-----LDCETPSEEDLGYLV 146
LA LG +YVD EL + +L S + T+ I S + +P + L
Sbjct: 1103 QLAFRLGLEYVDLELSLPEGLL-DTLCSKRRFTKIIGSYHDPRGLHRWSSPDWQSKYQLA 1161
Query: 147 SRMQATGADIIKLVFSVNDITEIARIFQLLS-HCQVPIIAYSVGERGLVSQLLSPKFNGA 205
+ DI+K V + + + + S H P++A ++G +G +S++L+P F
Sbjct: 1162 VNLXV---DIVKFVGTASCAQDNFDLEAFRSAHQSKPLVAINMGLQGKLSRVLNP-FMTP 1217
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTK--VFGLISKPVGHSKGPILHNPTFRH 263
+ + L P P S+RQ ++ + K F ++ P+ HS+ P LH +R
Sbjct: 1218 VTHSLL---PDSAAPGQMSVRQIHQALTMVGGIKPLKFYVVGTPISHSRSPNLHTAGYRE 1274
Query: 264 VNYNGIYVPMFVDDLKKFF-STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
+ + DD K F SPDF G + P K ++K+ ++ A+ I A+NT
Sbjct: 1275 LGLPHQFFRFETDDDSKVFHEVVESPDFGGCCITIPLKLKMLKYATQLSDSAKTIGAINT 1334
Query: 323 IIRRP-SDGKLIGYNTD 338
+ P DGK G NTD
Sbjct: 1335 MW--PIGDGKFAGTNTD 1349
>gi|402815730|ref|ZP_10865322.1| shikimate dehydrogenase AroE [Paenibacillus alvei DSM 29]
gi|402506770|gb|EJW17293.1| shikimate dehydrogenase AroE [Paenibacillus alvei DSM 29]
Length = 298
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
V +++ +KV+ +I P+ HSK P++HN + + NG+Y V + L+ + +
Sbjct: 13 VRNLDTSSKVYAVIGDPIAHSKSPLMHNAALQEMEVNGVYTAFHVKPEQLEHAVAGIRAL 72
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G +V P+KE VM + DE+ + I AVNTI+ +GKL GYNTD + ++++
Sbjct: 73 GLGGVNVTIPHKEQVMAYLDEIDESTRVIGAVNTIVH--CEGKLYGYNTDGLGYVRSLQE 130
Query: 349 AIK 351
++
Sbjct: 131 EMQ 133
>gi|218437685|ref|YP_002376014.1| shikimate 5-dehydrogenase [Cyanothece sp. PCC 7424]
gi|226729102|sp|B7KFV3.1|AROE_CYAP7 RecName: Full=Shikimate dehydrogenase
gi|218170413|gb|ACK69146.1| shikimate 5-dehydrogenase [Cyanothece sp. PCC 7424]
Length = 288
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN H+N N IYVP V +DL+ + +
Sbjct: 4 ITGKTKLLGVIGDPVEHSLSPVMHNAVIDHLNLNYIYVPFAVKPEDLRTAIAGLEAIGVV 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+ ++ + AQ + AVNT+ R ++ G NTD
Sbjct: 64 GFNLTIPHKQTIIPLLSTISETAQLVGAVNTVWR--TETGWSGTNTDV------------ 109
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
G+ P + V+ G GGA RA+ G G R
Sbjct: 110 -HGFLAPLKRLNLPWSQVSPVILGNGGAARAVVVGCYEMGCR 150
>gi|315281073|ref|ZP_07869790.1| shikimate 5-dehydrogenase [Listeria marthii FSL S4-120]
gi|313615282|gb|EFR88710.1| shikimate 5-dehydrogenase [Listeria marthii FSL S4-120]
Length = 291
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVRGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|452975134|gb|EME74953.1| shikimate 5-dehydrogenase [Bacillus sonorensis L12]
Length = 278
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++GLI PV HS P +HN + ++ +G Y V DDL+ + GF+V
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLDGYYHAFRVENDDLEDAVKGMRALGIQGFNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+MK+ D + A+ + AVNT+ R + L+GYNTD E + +++
Sbjct: 64 PHKVAIMKYLDRIDESARVLGAVNTVRREKEE--LVGYNTDGEGFLKSLK---------- 111
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRAL 383
S P++ ++ GAGGA RA+
Sbjct: 112 --PSLDKPVSELSILIIGAGGAARAI 135
>gi|383762257|ref|YP_005441239.1| shikimate 5-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381382525|dbj|BAL99341.1| shikimate 5-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 464
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSP 288
I+A T + GLI PV HS P +HN F + + YVP+ V+ + +
Sbjct: 9 ISAKTTLVGLIGWPVSHSVSPAMHNAAFAALGMDWRYVPLPVNPALPGAVGDAVRGMRAM 68
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G +V P+K+AV+ F D + P AQA+ AVNT+I +DG L G NTD I +
Sbjct: 69 GMRGINVTVPHKQAVLPFLDHIAPAAQAMRAVNTVIVE-ADGSLTGDNTDAPGFIADLR- 126
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
S G AG ++ GAGG+ RA+ +G G + +
Sbjct: 127 ------------SHGVDPAGEHALVLGAGGSARAVVYGLAQAGVQRI 161
>gi|406996985|gb|EKE15179.1| hypothetical protein ACD_12C00117G0002 [uncultured bacterium]
Length = 273
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV----PMFVDDLKKFFSTYSSPD 289
I+A TK+ +I PV HS P +HN + + +V + + D+ +
Sbjct: 3 ISAKTKICLIIGDPVTHSLSPAMHNAGYEALGIEDKFVFLGANVNIKDVGVTIQSMRKMG 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G + P+K VMK DE+ A+ I AVNT++ + +GKLIG+NTD ++ +E
Sbjct: 63 IHGLTCTIPHKIEVMKLLDEIDDTAKMIGAVNTVLNQ--NGKLIGFNTDWLGAVIPLEKI 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
+ L+ + ++ GAGGA RA+ FG R A V IF+
Sbjct: 121 --------------TTLSEKKVLVLGAGGAARAVIFGMLKRKAMVTIFN 155
>gi|410668003|ref|YP_006920374.1| shikimate dehydrogenase [Thermacetogenium phaeum DSM 12270]
gi|409105750|gb|AFV11875.1| shikimate dehydrogenase AroE [Thermacetogenium phaeum DSM 12270]
Length = 301
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TKVF L PVGHS P++ N F + YVP+ V D L + +
Sbjct: 5 IGGQTKVFALYGDPVGHSLSPVMQNRAFAACGLDCCYVPLRVKRDGLATAVAAIRALGLG 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ P+KE+V+K+ DEV A+ I AVN ++RR + +L GYNTD
Sbjct: 65 GVNITIPHKESVLKYLDEVDREAELIGAVNAVVRR--ENRLCGYNTD 109
>gi|385836870|ref|YP_005877322.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus lactis subsp.
cremoris A76]
gi|358750859|gb|AEU41837.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus lactis subsp.
cremoris A76]
Length = 286
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
+IN T++ +++ P+ HS P +HN F +N NG+Y+ V+ L + D
Sbjct: 2 NINGYTRMAAVVANPIKHSLSPFIHNLAFDLMNENGVYLAWEVEAEKLPAIVENVRTLDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK ++KF DE+ P A+ I VNT++ + GKLIG+NTD
Sbjct: 62 YGLNISMPYKGEIIKFMDELSPAAELIGVVNTVVNQ--SGKLIGHNTD 107
>gi|406832293|ref|ZP_11091887.1| 3-dehydroquinate dehydratase [Schlesneria paludicola DSM 18645]
Length = 485
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 160/392 (40%), Gaps = 23/392 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC + +S + ++Y A + D+VE+ C++ D++ +++ +PVLI
Sbjct: 1 MICISVTPESRQLAKVDIYNASNQ-CDLVEV---CLDRLHKEPDVKDMISGSKMPVLISC 56
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP GG +EG E +RL L A G YV+ + A I ++ + Q F
Sbjct: 57 RPPEEGGKFEGTEDERLALLRQAILAGPAYVELDPDSAMKI--PRFGTTQRVVSFA---- 110
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ-VPIIAYSVGE 190
T D+ + ADI+K + + + + + ++S + +P++ +G
Sbjct: 111 --SMTRPLSDVEEVFDEATRCKADIVKFTWPTDTLEQAWPLLAVVSQKRMLPVVGLGLGR 168
Query: 191 RGLVSQLLSPKFNGALVYGSL-KGTPVL-GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
GL LL K+ +Y +L +G G PTV L Y+ +++ T+ G++ V
Sbjct: 169 CGLTFSLLGRKYGSPWIYAALERGMEAFPGQPTVGELDDVYRWRQVDSKTRFIGIVGGGV 228
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
+ N F N +P+ + + +M D
Sbjct: 229 IELAMAKILNAAFDLSGMNTRCLPLDFKSISQATKMLEILKIPAIIATPQTGRQIMAIAD 288
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
+ A A + +I+ +DG +N ++++ A+E + ++ + PL
Sbjct: 289 KGDDAATASQFSDVVIKT-ADG-WQAHNLIWKSAVRALETKLGKQSADD------RPLDK 340
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400
R ++ G+GG A+A K R V I D
Sbjct: 341 RNTMIVGSGGLAVAMAQAVKRRHGLVSICSAD 372
>gi|386344333|ref|YP_006040497.1| shikimate 5-dehydrogenase [Streptococcus thermophilus JIM 8232]
gi|339277794|emb|CCC19542.1| shikimate 5-dehydrogenase [Streptococcus thermophilus JIM 8232]
Length = 285
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F + NG+YV + DL + F +
Sbjct: 3 IDGHTRLAAVVASPIKHSISPFIHNLAFEKTHVNGVYVAWEIPESDLAETFENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ F D + P AQ I AVNT++ DG+LIG+NTD ++++
Sbjct: 63 GINLSMPYKEKVIPFLDGLSPEAQLIGAVNTVVN--CDGRLIGHNTDGFGFFASLKNF-- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+P + +L GAGGA +++ A GA+ V
Sbjct: 119 ------------NPKDTHIMIL-GAGGAAKSIVTQAILDGAKKV 149
>gi|291548176|emb|CBL21284.1| shikimate dehydrogenase [Ruminococcus sp. SR1/5]
Length = 288
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I T + GL+ PV HS P++HN FR++ + +Y+ V + L + +
Sbjct: 3 NITGHTGLTGLLGSPVAHSVSPLMHNEAFRYLGLDYVYLCFDVTEETLPQAVEGLKACGI 62
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF++ P K +++ DE+ P AQ I AVNT+ R +GKL G+NTD + DA
Sbjct: 63 KGFNLTMPNKNKIVELLDELSPTAQLIGAVNTV--RNDNGKLKGFNTDGYGFTQSARDA- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + GR + G GGAG A+ + GA+ +
Sbjct: 120 ------------GCDVKGRTITVMGVGGAGMAICGQSALEGAKKI 152
>gi|354594119|ref|ZP_09012162.1| shikimate dehydrogenase [Commensalibacter intestini A911]
gi|353673230|gb|EHD14926.1| shikimate dehydrogenase [Commensalibacter intestini A911]
Length = 279
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I K+ ++ P+ HS+ P+LHN + +G Y+P+ V +D K + F
Sbjct: 4 ITGKAKIAAVLGWPIEHSRSPLLHNFWLQRHQIDGAYIPLAVKAEDFKNVIQGMKAAGFK 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEA + CD V A+ + +VNT + DGK+ G +TD + + ++DA
Sbjct: 64 GCNVTIPHKEAAYQCCDIVDETAKKMGSVNT-LWFTEDGKIHGTSTDGDGFVANLKDA-- 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
L + ++ GAGGA R++A+ GA++ I
Sbjct: 121 -----------DVTLTDKKVLILGAGGAARSVAYSLIQDGAQITI 154
>gi|210615766|ref|ZP_03290747.1| hypothetical protein CLONEX_02965 [Clostridium nexile DSM 1787]
gi|210150102|gb|EEA81111.1| hypothetical protein CLONEX_02965 [Clostridium nexile DSM 1787]
Length = 292
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I T++ GL+ PV HS P++HN F+ + + Y+ V D LK + +
Sbjct: 7 QITGHTRLTGLLGSPVEHSISPMMHNEAFQQLGLDYAYLAFDVGTDKLKTAVEGLRTLNV 66
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF++ P K + CD++ P A+ I AVNT++ +G LIGY TD + A++DA
Sbjct: 67 RGFNLTMPDKNLMCSLCDKLSPAAEIIGAVNTVVN--DNGVLIGYTTDGVGYMHAVKDA- 123
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDI 399
G + G+ L GAGGA A+ A G + + +F++
Sbjct: 124 ------------GHNIIGKKMTLLGAGGAATAILVQAALDGVSEISVFNV 161
>gi|336392730|ref|ZP_08574129.1| shikimate 5-dehydrogenase [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 291
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-FVDDLKKFFSTYSSPDFAG 292
I+ T+++G + P HS P+++N TF N +Y+ F DL ++ + +F G
Sbjct: 2 IDGKTQLYGFFAHPAQHSLSPLMYNTTFAEQKINAVYLAFDFTADLATAVTSMRTLNFGG 61
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
++ P+K V+ DE+ P A+ I AVNT++ + +G+LIG++TD
Sbjct: 62 ANLSMPFKAQVIPLLDEIAPEAKLIGAVNTVVNQ--NGRLIGHSTDGP------------ 107
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI 399
G+ G A G + GAGGAG LA A + A V D+
Sbjct: 108 -GFFAGLAQQGQTFQNAHLTILGAGGAG--LAIIAATGQAGVTAIDV 151
>gi|421766357|ref|ZP_16203131.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus garvieae
DCC43]
gi|407625125|gb|EKF51840.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus garvieae
DCC43]
Length = 288
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLK---KFFSTYSSPD 289
IN T++ +++ P+ HS P +HN F +N NG+Y+ ++D K + + +
Sbjct: 2 EINGQTRMAAVLAYPIKHSLSPFIHNRAFNLLNENGVYLAWELEDKKELGQMINNVRTLH 61
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK++ +F DE+ ++ I AVNTI+ R +G+L+GYNTD
Sbjct: 62 MYGLNISMPYKKSAFEFLDELSEESRLIGAVNTIVNR--NGRLVGYNTD 108
>gi|347759215|ref|YP_004866777.1| shikimate 5-dehydrogenase [Micavibrio aeruginosavorus ARL-13]
gi|347591733|gb|AEP10775.1| shikimate 5-dehydrogenase [Micavibrio aeruginosavorus ARL-13]
Length = 280
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
T+ GLI PV HS P++H + +G Y + + DDL + GF+V
Sbjct: 2 TRKTGLIGHPVSHSLSPVIHTHWLQQYRIDGTYTAIDIAPDDLSTRVRALVDDGYVGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE + CD++ AQA+ AVNT+ + G+L G+NTD + I ++ ++ +
Sbjct: 62 TLPHKEEIAFLCDDLDDTAQAVGAVNTVT-IDNRGRLHGHNTDVDGFINHLKSSVPD--- 117
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
L+G+ V+ GAGGA RA+ +
Sbjct: 118 --------FHLSGKHAVVLGAGGAARAVLY 139
>gi|427720930|ref|YP_007068924.1| shikimate dehydrogenase [Calothrix sp. PCC 7507]
gi|427353366|gb|AFY36090.1| shikimate dehydrogenase [Calothrix sp. PCC 7507]
Length = 301
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 23/167 (13%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRH-------VNYNGIYVPMFVD--DLKKFFST 284
I TK+ G+I PV HS P++HN + + +Y+P ++ +L +
Sbjct: 6 ITGKTKILGVIGHPVEHSLSPLMHNAALAQMVEDIAQLGLDYVYLPFPIEPQNLAVAIAG 65
Query: 285 YSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASIT 344
+++ GF+V P+K+A++ E+ PLAQ++ AVNT+ R+ + + +G NTD E I
Sbjct: 66 FAAVGVVGFNVTIPHKQAIIPLLSEISPLAQSVGAVNTVTRQ--NNQWVGTNTDVEGFIV 123
Query: 345 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
++ ++ + ++ V+ G GGA RA+ G G
Sbjct: 124 PLQ------------TTYHQDWSQKIAVILGNGGAARAVVAGCHQLG 158
>gi|418631434|ref|ZP_13193897.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU128]
gi|374835325|gb|EHR98941.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU128]
Length = 269
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ + D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPVNQLQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLIK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|428780823|ref|YP_007172609.1| shikimate 5-dehydrogenase [Dactylococcopsis salina PCC 8305]
gi|428695102|gb|AFZ51252.1| shikimate 5-dehydrogenase [Dactylococcopsis salina PCC 8305]
Length = 325
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++ N + + +YVP+ V DL + + +++ D
Sbjct: 24 ITGKTKLLGVIGDPVEHSLSPVMQNAALNELGLDYVYVPLPVKKGDLNRALAGFTAIDLV 83
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+ P+K+A++ D + P AQ + AVNT+ R ++ G NTD + I +
Sbjct: 84 GFNATIPHKQAIIPLLDRITPEAQKVGAVNTVWR--TEKGWEGTNTDVDGFIAPLIPL-- 139
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+R + M V+ G GGA RA+ G + G V
Sbjct: 140 DRDWSQ-----------VMPVILGNGGAARAVIVGCEKLGCSKV 172
>gi|189424711|ref|YP_001951888.1| shikimate 5-dehydrogenase [Geobacter lovleyi SZ]
gi|189420970|gb|ACD95368.1| shikimate 5-dehydrogenase [Geobacter lovleyi SZ]
Length = 293
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+ TKV+G+I PV HS P++ N + + IYVP V D L S + +
Sbjct: 7 VTGKTKVYGIIGWPVAHSLSPVMQNAALQAAAVDAIYVPFAVAPDQLATAISGLRAMHVS 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
GF+V P+K A+M DE+ P+A AVNT++ + G+LIG+NTD + + ++E+
Sbjct: 67 GFNVTIPHKTAIMTLLDELSPVAVQAGAVNTVVNQ--GGRLIGHNTDGDGLVISLEE 121
>gi|395329229|gb|EJF61617.1| Pentafunctional AroM protein [Dichomitus squalens LYAD-421 SS1]
Length = 1601
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 164/395 (41%), Gaps = 59/395 (14%)
Query: 36 GADVVEIRLDCINNFQP--------------GKDLEIILTKKPLPVLIVYRPKWAGGLYE 81
G D VE+R+D + + + + + + LP++ R GG +
Sbjct: 1096 GVDAVEVRVDLLRSSEDYDKLGPYIPPTAYVTEQIAALRHMTTLPLIFTVRTASQGGQFP 1155
Query: 82 GDEHKRLEALHL---AEDLGADYVDFEL----KVASNILGKQYSSHQSGTRFIVSCNLDC 134
+H EA L A LG +Y+D E+ K N++ + S + S N+
Sbjct: 1156 --DHAEKEAFELFVTAIRLGVEYIDVEISWSEKNIRNLIAGKGHSQIIASWHDWSGNMRW 1213
Query: 135 ETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVG 189
++ + ++ Y V+R DI+K+V N + + + + + PIIA ++G
Sbjct: 1214 DSKALDE-KYGVAREYG---DIVKIVGKANRLEDNFALHNFVLRQRATSDAKPIIAINMG 1269
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKP 247
G +S++L+ F+ + + L P P + Q H+ K F L P
Sbjct: 1270 VEGQMSRILNSTFS-PVTHNLL---PTKAAPGQLTFAQIQTALHLLGQLPAKKFYLFGTP 1325
Query: 248 VGHSKGPILHNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
+ HS P LHN F + Y D+++ + ++P+F G SV P+K +
Sbjct: 1326 IAHSMSPTLHNTAFEVLGLPHKYELFETETVGDEIR---AAIAAPNFGGASVTIPFKRDI 1382
Query: 304 MKFCDEVHPLAQAIAAVNTIIR-RPSDG--KLIGYNTDCEASITAIEDAIKERGYKNGTA 360
+ D + P A+AI AVNT+I +DG +L+G NTD +I ++ K A
Sbjct: 1383 IPLLDRLSPDAEAIGAVNTVIPVLTADGAVQLVGENTDWRGITHSIRRSLPPSVLKPEAA 1442
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
++ GAGG RA + G +
Sbjct: 1443 -----------LIIGAGGTSRAAIYALWKLGIETI 1466
>gi|304403896|ref|ZP_07385558.1| shikimate 5-dehydrogenase [Paenibacillus curdlanolyticus YK9]
gi|304346874|gb|EFM12706.1| shikimate 5-dehydrogenase [Paenibacillus curdlanolyticus YK9]
Length = 293
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I++ T +FG+I P+ HSK P++ N FR NG+Y + D L F + +
Sbjct: 14 RIDSHTVLFGVIGDPIRHSKSPVMLNRAFREAGVNGVYTAFHITPDKLGDFIAGVRAMGI 73
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+K VMK D + A AI AVNTI+ +G L G+NTD + ++++
Sbjct: 74 RGVNVTIPHKLDVMKHLDRIDESALAIGAVNTIVN--DNGVLTGFNTDGIGYVRSLKEEA 131
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
+ L G+ V+ GAGGA R + +
Sbjct: 132 E------------PTLDGKNIVVLGAGGAARGIVY 154
>gi|311031592|ref|ZP_07709682.1| shikimate 5-dehydrogenase [Bacillus sp. m3-13]
Length = 278
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I P+ HS P++HN F + Y V D L+ + GF+V
Sbjct: 4 LYGVIGSPIAHSMSPLIHNDAFLQNGMDAHYHAFHVEPDQLETAVAGMRVLGINGFNVTI 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+KEA++ D V A I AVNT++ R DG+LIGYNTD + A+++ +K
Sbjct: 64 PHKEAIIPLLDSVDDAALQIGAVNTVVNR--DGELIGYNTDGRGFVEALKEVVK------ 115
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVI 396
L + ++ GAGGA RA+ + A +G ++ I
Sbjct: 116 --------LKDKHVLIIGAGGAARAILYTLALEKGVQIDI 147
>gi|255018901|ref|ZP_05291027.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL F2-515]
Length = 163
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKEA 124
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
G + G+ + GAGGA A+ A G + + IF+
Sbjct: 125 -------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|406664822|ref|ZP_11072597.1| Shikimate dehydrogenase [Bacillus isronensis B3W22]
gi|405387670|gb|EKB47094.1| Shikimate dehydrogenase [Bacillus isronensis B3W22]
Length = 299
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPD 289
+ I+ TK+ GL++ P+GHS P +HN + + +NY + + ++L++ + +
Sbjct: 7 KKIDGKTKLVGLLATPIGHSLSPRMHNLGYSLKGLNYAYLAFEVGNEELEETVKGFKAAG 66
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
AGF+V P K V+ + DE+ A+ A NT++ R DGKLIGYNTD
Sbjct: 67 VAGFNVSMPNKMKVLDYLDELDDSAKYSRASNTVVNR--DGKLIGYNTDG---------- 114
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
GY G L G+ L G+GGA +A G R +
Sbjct: 115 ---LGYIRNLIEHGVELKGQKVTLVGSGGAATPIAIQFAQSGIREI 157
>gi|163783767|ref|ZP_02178752.1| shikimate 5-dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
gi|159880956|gb|EDP74475.1| shikimate 5-dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
Length = 282
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD-----DLKKFFSTYSS 287
++ +++G++ PV HS P+ N FRH+ +Y+P+ + DL
Sbjct: 2 NLKGSAEIYGVVGYPVRHSLSPVFQNAAFRHLGLEAVYIPIEISPEGLGDLINGLKVME- 60
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+F G +V P+KEAV++F D + + I A NT++ R DG + YNTD +
Sbjct: 61 -NFKGLNVTVPHKEAVLEFSDSLSEEVKKIGAANTLLFR--DGSIEAYNTDWLGFLR--- 114
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
+A + L GR ++ GAGGA RA+ + A V +++
Sbjct: 115 -----------SAELVTTLEGRKVLVLGAGGASRAVLYALNRAKAEVFLWN 154
>gi|336437054|ref|ZP_08616763.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 1_4_56FAA]
gi|336006188|gb|EGN36224.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 1_4_56FAA]
Length = 288
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GL+ PV HS P++HN F+ + + Y+ V D L+ +
Sbjct: 3 ERITGKTRLTGLLGSPVTHSISPMMHNEAFKELGLDYAYLAFDVGTDKLEAAVEGLKVLN 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + CD + P A+ I AVNT++ DG L GY TD + +++DA
Sbjct: 63 VRGFNVTMPDKNLMCSLCDHLSPAAEIIGAVNTVVN--EDGVLTGYTTDGIGYMMSVKDA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD 398
G + G+ + GAGGAG ++ A G A + +F+
Sbjct: 121 -------------GYDVIGKKMTIFGAGGAGTSILVQAALDGVAEITVFN 157
>gi|419990107|ref|ZP_14505080.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|420059466|ref|ZP_14572473.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|421919296|ref|ZP_16348799.1| 3-dehydroquinate dehydratase I [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|397367722|gb|EJJ60331.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397435464|gb|EJK26079.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|410118327|emb|CCM91424.1| 3-dehydroquinate dehydratase I [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
Length = 255
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 14/239 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
V NIT + T+IC PL+ ++++++L N + GAD++E R+D + + L
Sbjct: 11 VKNITFQEGETLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVDHFAQVREMAQVMAAL 70
Query: 61 TK-----KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
+ K LP+L +R K GG E + A G D +D EL + I
Sbjct: 71 AEIRGALKALPLLFTFRSKKEGGETELSDEAYFALNREAARSGLVDVIDIELFNDEAQIR 130
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 131 ALVDDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 190
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQ 227
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 191 AATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKLRE 249
>gi|392409696|ref|YP_006446303.1| shikimate dehydrogenase [Desulfomonile tiedjei DSM 6799]
gi|390622832|gb|AFM24039.1| shikimate dehydrogenase [Desulfomonile tiedjei DSM 6799]
Length = 280
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV------DDLKKFFSTYSS 287
+ T + G+I PV HS P +HN FR +N + YVP+ V D LK +
Sbjct: 2 VKGTTNLVGIIGFPVSHSLSPTMHNAAFRALNMDWKYVPLSVRPQNVPDALKGLIAL--- 58
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
F G +V P+KE V + +++ AQ I AVNTI+ + + L G+NTD
Sbjct: 59 -GFRGANVTVPHKEKVTPYLNDISADAQQIGAVNTILVQ--EDTLSGFNTDWS------- 108
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFGT 403
G+ N G +G ++ G+GG+ RA+++ RGA + I + GT
Sbjct: 109 ------GFLNHLTEIGFDPSGAKALILGSGGSARAVSYSLCQRGADISILSRNTGT 158
>gi|325958381|ref|YP_004289847.1| shikimate dehydrogenase [Methanobacterium sp. AL-21]
gi|325329813|gb|ADZ08875.1| Shikimate dehydrogenase [Methanobacterium sp. AL-21]
Length = 286
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T VFG+I PV HS P +HN F+ + + IYVP V + L+ S
Sbjct: 2 ITGKTNVFGIIGDPVEHSLSPGMHNAAFKELGMDNIYVPFQVKAEHLEDAILGAQSLGVK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K V+ + D + A I AVNTI +G+NTD ++ AIE+
Sbjct: 62 GFNVTIPHKTEVINYLDYLDIAAGLIGAVNTI--EFGKNGAVGHNTDGIGAVMAIEEV-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
+P+ + V+ GAGGA RA+AF
Sbjct: 118 ------------TPVKNKKVVILGAGGASRAIAF 139
>gi|223044396|ref|ZP_03614430.1| shikimate 5-dehydrogenase [Staphylococcus capitis SK14]
gi|222442265|gb|EEE48376.1| shikimate 5-dehydrogenase [Staphylococcus capitis SK14]
Length = 269
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
F +I P+ HS PI+H+ F +++ N Y P+ + D+ + +GF+V P
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFHLLRDIITEKKLSGFNVTIP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE ++ + DEV ++ + AVNT++ R DGK IGYNTD GY G
Sbjct: 63 HKERIIPYLDEVDEQSKTVGAVNTVLIR--DGKWIGYNTDG-------------IGYVTG 107
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALA 384
L ++ GAGGA + +A
Sbjct: 108 LKQIYDDLKNAYILILGAGGASKGIA 133
>gi|302872326|ref|YP_003840962.1| shikimate 5-dehydrogenase [Caldicellulosiruptor obsidiansis OB47]
gi|302575185|gb|ADL42976.1| shikimate 5-dehydrogenase [Caldicellulosiruptor obsidiansis OB47]
Length = 279
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFS-TYSSPDFAGFSVGFP 298
LI K + HS P +HN + + +Y + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFVHNKILSELGIDAVYSNVELSDFVKLKEFVEMVRKDKDVIGFNITIP 65
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE +++FCDEV + I A NT+ + +GKL+ YNTD G+K
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKEEGKLLAYNTDW-------------IGFKKS 110
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + + ++ G+GGA +A +G GA+ V
Sbjct: 111 LEDIGVDVKDKKILVLGSGGAAKACIYGLYRMGAKEV 147
>gi|378976947|ref|YP_005225088.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|419973487|ref|ZP_14488911.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980106|ref|ZP_14495393.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419985023|ref|ZP_14500166.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419995987|ref|ZP_14510791.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003090|ref|ZP_14517738.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420007861|ref|ZP_14522353.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013832|ref|ZP_14528141.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420019143|ref|ZP_14533337.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024635|ref|ZP_14538647.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420031628|ref|ZP_14545448.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420037928|ref|ZP_14551579.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420042186|ref|ZP_14555680.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420048364|ref|ZP_14561678.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420053594|ref|ZP_14566771.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420065183|ref|ZP_14577990.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073112|ref|ZP_14585742.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420075984|ref|ZP_14588458.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420084183|ref|ZP_14596448.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421909950|ref|ZP_16339745.1| 3-dehydroquinate dehydratase I [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|428151079|ref|ZP_18998824.1| 3-dehydroquinate dehydratase I [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428938470|ref|ZP_19011597.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae VA360]
gi|364516358|gb|AEW59486.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397347022|gb|EJJ40132.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397348126|gb|EJJ41228.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397353007|gb|EJJ46084.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397366108|gb|EJJ58727.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397370397|gb|EJJ62980.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397379154|gb|EJJ71352.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397383947|gb|EJJ76074.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397389309|gb|EJJ81251.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397398572|gb|EJJ90234.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397399775|gb|EJJ91425.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397404885|gb|EJJ96371.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397415552|gb|EJK06737.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397416835|gb|EJK08005.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397423822|gb|EJK14739.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397432270|gb|EJK22934.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397438253|gb|EJK28765.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397447946|gb|EJK38131.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397450433|gb|EJK40538.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|410116080|emb|CCM82370.1| 3-dehydroquinate dehydratase I [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|426305698|gb|EKV67815.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae VA360]
gi|427538898|emb|CCM94962.1| 3-dehydroquinate dehydratase I [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 251
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 14/239 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
V NIT + T+IC PL+ ++++++L N + GAD++E R+D + + L
Sbjct: 7 VKNITFQEGETLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVDHFAQVREMAQVMAAL 66
Query: 61 TK-----KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
+ K LP+L +R K GG E + A G D +D EL + I
Sbjct: 67 AEIRGALKALPLLFTFRSKKEGGETELSDEAYFALNREAARSGLVDVIDIELFNDEAQIR 126
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 127 ALVDDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 186
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQ 227
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 187 AATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKLRE 245
>gi|323309831|gb|EGA63035.1| Aro1p [Saccharomyces cerevisiae FostersO]
Length = 1416
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 145/324 (44%), Gaps = 36/324 (11%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R K GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTKKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 QAT---GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHN-----TG 1328
Query: 266 YNGIYVPMFVDDLKKFFSTYSS-----------PDFAGFSVGFPYKEAVMKFCDEVHPLA 314
Y + +P D F T S+ +F G +V P K +M++ DE+ A
Sbjct: 1329 YEILGLPHKFDK----FETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAA 1384
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTD 338
+ I AVNT+I + K G NTD
Sbjct: 1385 KIIGAVNTVIPL-GNKKFKGDNTD 1407
>gi|261405559|ref|YP_003241800.1| shikimate 5-dehydrogenase [Paenibacillus sp. Y412MC10]
gi|261282022|gb|ACX63993.1| shikimate 5-dehydrogenase [Paenibacillus sp. Y412MC10]
Length = 288
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 230 KVEHINA-DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYS 286
KV +N D + G++ P+GHSK P +H+ + +G YVP+ + L
Sbjct: 2 KVNPMNERDYLLLGVMGDPIGHSKSPAMHDAAINALGLSGAYVPLHIRPQGLGDAIQAVK 61
Query: 287 SPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI 346
F G +V P+K VMK+ D V AQ I AVNTI+ +GKL GYNTD + ++
Sbjct: 62 VLGFRGVNVTIPHKVEVMKYLDVVDEGAQRIGAVNTIVN--DNGKLTGYNTDGIGYVRSL 119
Query: 347 EDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
+D L G+ V+ GAGGA R + +
Sbjct: 120 KD------------EACPDLKGKRIVVIGAGGAARGIIY 146
>gi|443321693|ref|ZP_21050737.1| shikimate 5-dehydrogenase [Gloeocapsa sp. PCC 73106]
gi|442788605|gb|ELR98294.1| shikimate 5-dehydrogenase [Gloeocapsa sp. PCC 73106]
Length = 282
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 288
+E I TK+ G+I P+ HS P++HN + + + +YVP V DL + +
Sbjct: 1 MEIITGKTKLLGVIGDPIEHSLSPVMHNAAIKALGLDYVYVPFAVKSADLGGAIAGLQAI 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ GF+V P+K+A++ F E+ PLAQ + A NT+ R + + G NTD E + + +
Sbjct: 61 NCQGFNVTIPHKQAIIPFLREISPLAQMVGATNTVWREATHWQ--GTNTDVEGFLAPLRE 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
ER + PL + G GGA RA+ K G
Sbjct: 119 I--ERPWHE-----IKPL------VLGYGGAARAVVVALKRLG 148
>gi|159905662|ref|YP_001549324.1| 3-dehydroquinate dehydratase, type I [Methanococcus maripaludis C6]
gi|229488295|sp|A9A9R9.1|AROD_METM6 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|159887155|gb|ABX02092.1| 3-dehydroquinate dehydratase, type I [Methanococcus maripaludis C6]
Length = 218
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ ++V +++ +A G D+VE R+D +N+ E I +P ++
Sbjct: 1 MICIPVIDENVSDAINSAKEALKYG-DIVEFRVDLLNDVT----FEDIEKFSKIPSILTI 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI-LGKQYSSHQSGTRFIVSC 130
R +W GG ++ +++R+E L A A ++D ELK N+ L K + S T+ IVS
Sbjct: 56 RAEWEGGAWKKSDNERIELLKYAIKNNAKFIDIELKEERNLELVKYRNEIGSKTKIIVSY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TP ++L +V + G DI K + + +I L++ IIA +GE
Sbjct: 116 HDFEKTPEIDELIDVVEKELKIG-DIAKFATFAHSKEDTLKILNLMNKYSGKIIAIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKG 213
G ++++L F L + S++G
Sbjct: 175 SGKLTRILGLDFGSILTFASMEG 197
>gi|366166816|ref|ZP_09466571.1| shikimate dehydrogenase [Acetivibrio cellulolyticus CD2]
Length = 294
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 16/162 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
+ T++ GLI PV HS P LHN + + +YVP+ VD +L+ + DF
Sbjct: 7 VTGKTRLLGLIGNPVEHSVSPQLHNSLSLLLGLDLLYVPLKVDKENLEVVVKALKAVDFV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V PYK +MKF D+ A + +VNT+ + +G+L GYNTD E + A ++A
Sbjct: 67 GFNVTIPYKRDIMKFIDDNTKEAILMGSVNTV--KKIEGRLYGYNTDGEGFLRAFKEAA- 123
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
G+ G+ V+ GAGGA R +A GA
Sbjct: 124 -----------GTGFKGKKVVMIGAGGAARPIAVKIAMDGAE 154
>gi|182680472|ref|YP_001834618.1| shikimate 5-dehydrogenase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182636355|gb|ACB97129.1| shikimate 5-dehydrogenase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 284
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYK 300
+I P+ HS+ P++HN + G Y + V + L F F G +V P+K
Sbjct: 15 VIGYPIKHSRSPLIHNYWLQRYGIAGSYEKIEVAPEHLADFLRDLGGKGFVGANVTLPHK 74
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E CDEV A+ + AVNT+ R DG+L G+NTD E + A++ + G A
Sbjct: 75 ETAFALCDEVSEEARQLGAVNTLFLR--DGRLHGHNTDGEGFLGALDQEVPAWDKDLGKA 132
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
V+ GAGGA RAL F RGA
Sbjct: 133 -----------VIIGAGGAARALVFALLRRGA 153
>gi|124024693|ref|YP_001019000.1| shikimate 5-dehydrogenase [Prochlorococcus marinus str. MIT 9303]
gi|123964979|gb|ABM79735.1| Shikimate / quinate 5-dehydrogenase [Prochlorococcus marinus str.
MIT 9303]
Length = 322
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I+ T + GL+ +PV HS P++ N +N + Y+ P +DL S +
Sbjct: 21 ISGTTSLIGLLGQPVHHSLSPVMQNAALTAMNLDWCYMAMPCETNDLANVLCALRSINCL 80
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+K+ V K C E+ PLA+ + AVNT+I DG G NTD I ++++
Sbjct: 81 GLNITIPHKQDVAKTCRELSPLAKRLKAVNTLIPH-VDGGWTGTNTDVAGFIAPLQESKC 139
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
E GR V+ G GG+ RA+ G
Sbjct: 140 E-------------WHGRRAVVLGCGGSARAVVAG 161
>gi|255030723|ref|ZP_05302674.1| shikimate 5-dehydrogenase [Listeria monocytogenes LO28]
Length = 177
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKEA 124
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
G + G+ + GAGGA A+ A G + + IF+
Sbjct: 125 -------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|255656694|ref|ZP_05402103.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-23m63]
gi|296451777|ref|ZP_06893503.1| shikimate dehydrogenase [Clostridium difficile NAP08]
gi|296880095|ref|ZP_06904063.1| shikimate dehydrogenase [Clostridium difficile NAP07]
gi|296259387|gb|EFH06256.1| shikimate dehydrogenase [Clostridium difficile NAP08]
gi|296428909|gb|EFH14788.1| shikimate dehydrogenase [Clostridium difficile NAP07]
Length = 287
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F ++ + Y+ + VD +K+ S + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFEKLDLDYRYLAFDITVDKVKEALSAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
GY + G+ + GAGGA A+ GAR + IF+
Sbjct: 109 --VGYVRNLKENEVEVKGKKVTIMGAGGAATAIQVQCALDGAREISIFN 155
>gi|374673844|dbj|BAL51735.1| shikimate 5-dehydrogenase [Lactococcus lactis subsp. lactis IO-1]
Length = 286
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
+IN T++ +++ P+ HS P +HN +F N NG+Y+ V+ L + D
Sbjct: 2 NINGYTRMAAVVANPIKHSLSPFIHNLSFDLTNENGVYLAWEVEAEKLPAIVDNVRTLDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK ++ F DE+ P A+ I AVNT++ + GKLIG+NTD
Sbjct: 62 YGLNISMPYKTEIIPFMDELSPAAELIGAVNTVVNQ--SGKLIGHNTD 107
>gi|418327821|ref|ZP_12938958.1| shikimate dehydrogenase substrate-binding domain protein, partial
[Staphylococcus epidermidis 14.1.R1.SE]
gi|365232599|gb|EHM73590.1| shikimate dehydrogenase substrate-binding domain protein, partial
[Staphylococcus epidermidis 14.1.R1.SE]
Length = 168
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ + D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPVNQLQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLIK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|296109906|ref|YP_003616855.1| 3-dehydroquinate dehydratase, type I [methanocaldococcus infernus
ME]
gi|295434720|gb|ADG13891.1| 3-dehydroquinate dehydratase, type I [Methanocaldococcus infernus
ME]
Length = 219
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 10/221 (4%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MI P++ + VE L + + + AD+VE RLD + LE I +I
Sbjct: 1 MIALPVVERKVEDSL-RVAEEYLKVADIVEFRLDYLEEVS----LEDIGKFCKFNSIITI 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH-QSGTRFIVSC 130
RP W GG + D+ +R+E A + A ++D EL+ N ++ + S T+ I+S
Sbjct: 56 RPTWEGGYW--DKGERVELFKKAIEENAKFIDVELREEKNKELVEFRNRIGSKTKVIISY 113
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ ETPS E L +V G DI K+ V D ++ +I L + + IIA +GE
Sbjct: 114 HNFEETPSFEKLCEVVENSLKIG-DIAKIATMVKDKEDVLKILNLANKYRGRIIAIGMGE 172
Query: 191 RGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYK 230
G ++++L+P F L + S KG + G +E L++ ++
Sbjct: 173 EGRLTRILAPYFGSILTFASYKGKSSAPGQIEIEELKEIWR 213
>gi|407980292|ref|ZP_11161085.1| shikimate dehydrogenase [Bacillus sp. HYC-10]
gi|407413004|gb|EKF34747.1| shikimate dehydrogenase [Bacillus sp. HYC-10]
Length = 300
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ + +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVNGMKAMGA 67
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AGF+V P K V+ + DE+ A+ A NT++ + DGKL+GYNTD
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSAKYTRASNTVVNK--DGKLVGYNTDG----------- 114
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
GY G L G+ L G+GGA +A G R +
Sbjct: 115 --LGYVRNLIEHGVELTGQKVTLVGSGGAATPIAIQLAQSGIREI 157
>gi|444353151|ref|YP_007389295.1| Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
[Enterobacter aerogenes EA1509E]
gi|443903981|emb|CCG31755.1| Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
[Enterobacter aerogenes EA1509E]
Length = 287
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 289
E + T++ GLI+ P+ HS P +HN F H+ + Y+ VD +LK + +
Sbjct: 3 ERLTGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYAYLAFEVDNQELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G++V P K + ++ D++ P AQ + AVNT++ +G L G+ TD + A+ +A
Sbjct: 63 LRGYNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DNGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFD 398
G + G+ + GAGGA A++ A G + + IF+
Sbjct: 121 -------------GIDIIGKKMTILGAGGAATAISVQAALDGVKAISIFN 157
>gi|336248715|ref|YP_004592425.1| shikimate 5-dehydrogenase [Enterobacter aerogenes KCTC 2190]
gi|334734771|gb|AEG97146.1| shikimate 5-dehydrogenase [Enterobacter aerogenes KCTC 2190]
Length = 287
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 289
E + T++ GLI+ P+ HS P +HN F H+ + Y+ VD +LK + +
Sbjct: 3 ERLTGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYAYLAFEVDNQELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G++V P K + ++ D++ P AQ + AVNT++ +G L G+ TD + A+ +A
Sbjct: 63 LRGYNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DNGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFD 398
G + G+ + GAGGA A++ A G + + IF+
Sbjct: 121 -------------GIDIIGKKMTILGAGGAATAISVQAALDGVKAISIFN 157
>gi|15613887|ref|NP_242190.1| shikimate 5-dehydrogenase [Bacillus halodurans C-125]
gi|20137510|sp|Q9KD93.1|AROE_BACHD RecName: Full=Shikimate dehydrogenase
gi|10173940|dbj|BAB05043.1| shikimate 5-dehydrogenase [Bacillus halodurans C-125]
Length = 278
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K+FGL+ PVGHS P++HN F+ ++++G Y V+ L+K + GF+V
Sbjct: 3 KLFGLLGHPVGHSLSPLMHNQMFQLLDFDGYYHAFDVEPSQLEKAVEGARALQMQGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
P+K +M + D V AQ I AVNT++ + DG+L G NTD + + ++ D +
Sbjct: 63 IPHKVTIMDYLDMVDEEAQEIGAVNTVVMK--DGQLFGSNTDGQGYLESLMDVV 114
>gi|429761248|ref|ZP_19293678.1| shikimate dehydrogenase [Anaerostipes hadrus DSM 3319]
gi|429184272|gb|EKY25295.1| shikimate dehydrogenase [Anaerostipes hadrus DSM 3319]
Length = 291
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ TK+FGLI PV HS P + N F+ +G Y+ + +++ +F + +
Sbjct: 4 RISGTTKLFGLIGSPVSHSASPAMQNYGFQACGVDGAYLAFDIKEEEVPEFVKSMRLLNI 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K A + DE+ P A+ I AVNTI+ R DGKL G+ TD E + ++D
Sbjct: 64 QGCNVTMPNKTAAAQNMDELSPAAELIGAVNTIVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
G + G+ V+ GAGGA A+ GA+ + IF+
Sbjct: 120 -----------HGIGVEGKDIVIFGAGGAATAIQVQCALDGAKSITIFN 157
>gi|392407617|ref|YP_006444225.1| shikimate dehydrogenase [Anaerobaculum mobile DSM 13181]
gi|390620753|gb|AFM21900.1| shikimate dehydrogenase [Anaerobaculum mobile DSM 13181]
Length = 290
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFA 291
N DT+ L P+ + P+LHN F N +Y P+ + DDL K T +
Sbjct: 5 NVDTRFIALYGNPLKQTLSPLLHNTVFESKKMNNLYYPLEIQSFDDLSKALKTMHVFNVI 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYKE V++ D + A+ AVNT++ ++ LIGYNTD + + +
Sbjct: 65 GANVTMPYKEKVIELLDGLDKSAEQCGAVNTVVT--TEKGLIGYNTDGMGFLNSFME--- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD 398
F G+ F+L GAGGA +A+ F + G ++V++++
Sbjct: 120 ---------EFNVSPEGKTFLLIGAGGAAKAVVFAFLNAGVSKVIVYN 158
>gi|20093867|ref|NP_613714.1| 3-dehydroquinate dehydratase [Methanopyrus kandleri AV19]
gi|23813709|sp|Q8TY76.1|AROD_METKA RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|19886799|gb|AAM01644.1| 3-dehydroquinate dehydratase [Methanopyrus kandleri AV19]
Length = 215
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILT-KKPLPVLIV 70
MI A L +++E ++ +A +GAD +E+RLD + N L + + V+
Sbjct: 1 MIIATLTGRTIEDMVELAIEAVEQGADALEVRLDYLENLDMSTALRAVRECTRYERVVAT 60
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
R + GGLY+GDE +RLE L ADYVD EL VA ++ S T IVS
Sbjct: 61 LRREEEGGLYKGDEDRRLEILERVSS-EADYVDLELDVAE----EEIISPSCET--IVSY 113
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TP +E+L + R G D+ K+V + RI +++ + P I +++GE
Sbjct: 114 HNFENTPPKEELIGIRDRCAELG-DVAKVVTMARGHEDALRILEVVRTAEAPTIGFAMGE 172
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQ 227
++++S G Y +++ G TVE R+
Sbjct: 173 EAKYTRVVSVLIGGFATYAAVRKKAAPGQLTVEETRK 209
>gi|406948119|gb|EKD78911.1| hypothetical protein ACD_41C00227G0005 [uncultured bacterium]
Length = 368
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 46/247 (18%)
Query: 135 ETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLV 194
TPS + L ++ ++ K+ VN + ++ + +L I +GE G++
Sbjct: 73 RTPSYQLLDQVIKKIS-----FPKIATQVNTVDDLYTLAKLQKKYGKKAIVIGMGELGMM 127
Query: 195 SQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSK 252
+++ + L Y S+ T G TV L+ T ++FGLI + HS
Sbjct: 128 TRVYNKSL---LTYASVSKTTATAAGQLTVAELKST----------RIFGLIGDDIQHSL 174
Query: 253 GPILHN-PTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311
P LH +R+ + DDLKKF ++ G SV P+K VMK+CD +
Sbjct: 175 SPKLHRGQPYRYQLWQ-------TDDLKKFMFVFNWFQLPGASVTKPFKIDVMKYCDRLD 227
Query: 312 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF 371
A+ I AVNT++RR KL+GYNTD AI G L G+
Sbjct: 228 SDAKKIGAVNTLVRRGK--KLVGYNTDWMGVDKAI----------------GKYLKGKTV 269
Query: 372 VLAGAGG 378
++ G GG
Sbjct: 270 LILGRGG 276
>gi|328950649|ref|YP_004367984.1| shikimate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
gi|328450973|gb|AEB11874.1| Shikimate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
Length = 270
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
GLI P+ HS P +H + GIY + D+L+ + G +V P
Sbjct: 3 LGLIGYPLAHSVSPAMHRAALQAAGLEGIYRLLETPPDELESRVMEVRR-GYRGVNVTVP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA-IKERGYKN 357
+K AV+ + DEV P QAI AVNTI+ +G+L+G+NTD A+E A + RG +
Sbjct: 62 HKVAVLPYLDEVSPEVQAIGAVNTIVN--EEGRLVGHNTDAPGFTRALEAAGVTARGLRA 119
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
V+ GAGGA RA+ + GARV + + F
Sbjct: 120 --------------VVLGAGGAARAVVYALVQAGARVRVANRTF 149
>gi|167768014|ref|ZP_02440067.1| hypothetical protein CLOSS21_02557 [Clostridium sp. SS2/1]
gi|317498392|ref|ZP_07956687.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710343|gb|EDS20922.1| shikimate dehydrogenase [Clostridium sp. SS2/1]
gi|316894286|gb|EFV16473.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 291
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ TK+FGLI PV HS P + N F+ +G Y+ + +++ +F + +
Sbjct: 4 RISGTTKLFGLIGSPVSHSASPAMQNYGFQACGVDGAYLAFDIKEEEVPEFVKSMRLLNI 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K A + DE+ P A+ I AVNTI+ R DGKL G+ TD E + ++D
Sbjct: 64 QGCNVTMPNKTAAAQNMDELSPAAELIGAVNTIVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
G + G+ V+ GAGGA A+ GA+ + IF+
Sbjct: 120 -----------HGIGVEGKDIVIFGAGGAATAIQVQCALDGAKSITIFN 157
>gi|229597718|pdb|3DON|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From
Staphylococcus Epidermidis
gi|229597719|pdb|3DOO|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From
Staphylococcus Epidermidis Complexed With Shikimate
Length = 277
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|45358957|ref|NP_988514.1| 3-dehydroquinate dehydratase [Methanococcus maripaludis S2]
gi|74553802|sp|Q6LXF7.1|AROD_METMP RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|45047823|emb|CAF30950.1| 3-dehydroquinate dehydratase (Type I DHQase) [Methanococcus
maripaludis S2]
Length = 218
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 12/224 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCIN--NFQPGKDLEIILTKKPLPVLI 69
MIC P++ + V +++ +A G D+VE R+D +N NF KD+E +P +I
Sbjct: 1 MICIPVIDKDVSDAINSAKEALKYG-DIVEFRIDLLNDVNF---KDIEEF---SKIPSII 53
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI-LGKQYSSHQSGTRFIV 128
R +W GG + +R+E L A A ++D ELK N+ L K + S T+ IV
Sbjct: 54 TIRAEWEGGAWRKSNEERIELLKNAIKNNAKFIDIELKEEKNLELVKYRNEIGSTTKIIV 113
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSV 188
S + +TP ++L +V + G DI K + + +I L++ IIA +
Sbjct: 114 SYHDFEKTPEIDELIDVVEKELKIG-DIAKFATFAHSKEDTLKILNLMNRYSGKIIAIGM 172
Query: 189 GERGLVSQLLSPKFNGALVYGSLKGTPVL-GLPTVESLRQTYKV 231
GE G ++++L F L + S+ G G V+ L++ K+
Sbjct: 173 GESGKLTRILGLDFGSILTFASMGGKASAPGQVDVKKLKEILKL 216
>gi|398307025|ref|ZP_10510611.1| shikimate 5-dehydrogenase [Bacillus vallismortis DV1-F-3]
Length = 280
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGYYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT +RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMNYLDHIDESAKVIGAVNT-VRREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
P++ F++ GAGGA RA+
Sbjct: 117 --------PISELSFLMIGAGGAARAI 135
>gi|422939616|ref|ZP_16966993.1| shikimate dehydrogenase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339890522|gb|EGQ79635.1| shikimate dehydrogenase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 288
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I T + GLI P+ HS+ P +HN F + + +Y+ V +LK +
Sbjct: 4 RIQGTTGLIGLIGDPLKHSRSPHMHNSAFDKLGLDYVYLCFEVPKGELKSGIEALKTFSA 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ FP+K+ V+K+ D++ A+ I +VNTI P K+ GYNTD
Sbjct: 64 KGSNITFPHKQEVLKYLDDISEDAKIIGSVNTIKIDPETKKITGYNTDG----------- 112
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
RG+ P + VL G GGAGRA+A
Sbjct: 113 --RGFIASLDELNIPFRKQKVVLIGVGGAGRAIAI 145
>gi|238893049|ref|YP_002917783.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238545365|dbj|BAH61716.1| 3-dehydroquinate dehydratase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 255
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
V NIT + T+IC PL+ ++++++L N + GAD++E R+D + + L
Sbjct: 11 VKNITFQEGETLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVDHFAQVREMAQVMAAL 70
Query: 61 TK-----KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
+ K LP+L +R K GG E + A G D +D EL + I
Sbjct: 71 AEIRGALKALPLLFTFRSKKEGGETELSDEAYFALNREAARSGLVDVIDIELFNDEAQIR 130
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + ++S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 131 ALVDDAHAAGVKVLMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 190
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 191 AATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAIAKLREV 250
Query: 229 YKV 231
+
Sbjct: 251 MDI 253
>gi|393200249|ref|YP_006462091.1| shikimate 5-dehydrogenase [Solibacillus silvestris StLB046]
gi|327439580|dbj|BAK15945.1| shikimate 5-dehydrogenase [Solibacillus silvestris StLB046]
Length = 280
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K F +I P+ SK P +HN + N + Y+P+ V + L++ +++ +G++V
Sbjct: 3 KWFAVIGDPIAQSKSPEMHNAWYEEGNVDATYIPIHVKPEHLQQAVASFKLLGTSGWNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
P+K+ ++ F DE+ LA+ + AVNT++R ++GKL GYNTD + ++E AI
Sbjct: 63 IPHKQTIIPFLDELDELAEKMGAVNTVVRT-AEGKLKGYNTDGPGFVKSLEHAI 115
>gi|398826203|ref|ZP_10584462.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. YR681]
gi|398221636|gb|EJN08040.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. YR681]
Length = 292
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 22/163 (13%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + G Y + V L+ FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRGHYQLIEVAGADAAGLRMMLEGVRRLGFAGTNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
FPYKEAV+ DE+ P A +AAVNT++ R DG+LIG+NTD G+
Sbjct: 75 FPYKEAVVPLLDELAPTAATMAAVNTVVVR--DGRLIGHNTDTT-------------GFA 119
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFD 398
A +P +G + G GG G+A+AF S + + + IFD
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLKVSDLRIFD 161
>gi|308174355|ref|YP_003921060.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|307607219|emb|CBI43590.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens DSM 7]
Length = 280
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPRHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT ++R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNT-VKREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ P++ ++ GAGGA RA+
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAI 135
>gi|27468200|ref|NP_764837.1| shikimate dehydrogenease [Staphylococcus epidermidis ATCC 12228]
gi|32129422|sp|Q8CP09.1|AROE_STAES RecName: Full=Shikimate dehydrogenase
gi|27315746|gb|AAO04881.1|AE016748_115 shikimate dehydrogenease [Staphylococcus epidermidis ATCC 12228]
Length = 272
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 6 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 62
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 63 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 107
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 108 VNGLKQIYEGIEDAYILILGAGGASKGIA 136
>gi|406667404|ref|ZP_11075162.1| Shikimate dehydrogenase [Bacillus isronensis B3W22]
gi|405384772|gb|EKB44213.1| Shikimate dehydrogenase [Bacillus isronensis B3W22]
Length = 282
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K F +I P+ SK P +HN + N + Y+P+ V + L++ +++ +G++V
Sbjct: 5 KWFAVIGDPIAQSKSPEMHNAWYEEGNVDATYIPIHVKPEHLQQAVASFKLLGTSGWNVT 64
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
P+K+ ++ F DE+ LA+ + AVNT++R ++GKL GYNTD + ++E AI
Sbjct: 65 IPHKQTIIPFLDELDELAEKMGAVNTVVRT-AEGKLKGYNTDGPGFVKSLEHAI 117
>gi|452856329|ref|YP_007498012.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452080589|emb|CCP22352.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 280
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPRHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT ++R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNT-VKREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ P++ ++ GAGGA RA+
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAI 135
>gi|375363099|ref|YP_005131138.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384266178|ref|YP_005421885.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385265565|ref|ZP_10043652.1| shikimate 5-dehydrogenase [Bacillus sp. 5B6]
gi|387899199|ref|YP_006329495.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|421730915|ref|ZP_16170041.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451346228|ref|YP_007444859.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
gi|371569093|emb|CCF05943.1| Shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380499531|emb|CCG50569.1| Shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385150061|gb|EIF13998.1| shikimate 5-dehydrogenase [Bacillus sp. 5B6]
gi|387173309|gb|AFJ62770.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|407075069|gb|EKE48056.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849986|gb|AGF26978.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
Length = 280
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT ++R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNT-VKREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ P++ ++ GAGGA RA+
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAI 135
>gi|429505975|ref|YP_007187159.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429487565|gb|AFZ91489.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 280
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT ++R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNT-VKREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ P++ ++ GAGGA RA+
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAI 135
>gi|57867066|ref|YP_188739.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis RP62A]
gi|251811012|ref|ZP_04825485.1| shikimate dehydrogenease [Staphylococcus epidermidis BCM-HMP0060]
gi|282875976|ref|ZP_06284843.1| shikimate dehydrogenase [Staphylococcus epidermidis SK135]
gi|417913720|ref|ZP_12557383.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU109]
gi|418606026|ref|ZP_13169322.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU057]
gi|418609480|ref|ZP_13172632.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU065]
gi|418612796|ref|ZP_13175820.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU117]
gi|418625281|ref|ZP_13187934.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU125]
gi|418626391|ref|ZP_13189003.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU126]
gi|418629399|ref|ZP_13191907.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU127]
gi|419769474|ref|ZP_14295568.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771800|ref|ZP_14297846.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-K]
gi|420165585|ref|ZP_14672276.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM088]
gi|420170302|ref|ZP_14676863.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM070]
gi|420172648|ref|ZP_14679147.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM067]
gi|420197474|ref|ZP_14703198.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM020]
gi|420202365|ref|ZP_14707958.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM018]
gi|420209101|ref|ZP_14714539.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM003]
gi|420211257|ref|ZP_14716631.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM001]
gi|420227385|ref|ZP_14732154.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05003]
gi|421606910|ref|ZP_16048161.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis AU12-03]
gi|71152254|sp|Q5HNV1.1|AROE_STAEQ RecName: Full=Shikimate dehydrogenase
gi|57637724|gb|AAW54512.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis RP62A]
gi|251805522|gb|EES58179.1| shikimate dehydrogenease [Staphylococcus epidermidis BCM-HMP0060]
gi|281295001|gb|EFA87528.1| shikimate dehydrogenase [Staphylococcus epidermidis SK135]
gi|341654742|gb|EGS78480.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU109]
gi|374407694|gb|EHQ78546.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU065]
gi|374409465|gb|EHQ80256.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU057]
gi|374817873|gb|EHR82048.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU117]
gi|374825423|gb|EHR89359.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU125]
gi|374832825|gb|EHR96530.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU126]
gi|374834102|gb|EHR97762.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU127]
gi|383358093|gb|EID35554.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-250]
gi|383360619|gb|EID38014.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-K]
gi|394235386|gb|EJD80958.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM088]
gi|394240640|gb|EJD86063.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM070]
gi|394241809|gb|EJD87218.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM067]
gi|394266281|gb|EJE10927.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM020]
gi|394269773|gb|EJE14303.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM018]
gi|394279329|gb|EJE23637.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM003]
gi|394281710|gb|EJE25936.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM001]
gi|394297191|gb|EJE40800.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05003]
gi|406657379|gb|EKC83767.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis AU12-03]
Length = 269
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|314933766|ref|ZP_07841131.1| shikimate dehydrogenase [Staphylococcus caprae C87]
gi|313653916|gb|EFS17673.1| shikimate dehydrogenase [Staphylococcus caprae C87]
Length = 269
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
F +I P+ HS PI+H+ F +++ N Y P+ + D+ + +GF+V P
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFLLLRDIITEKKLSGFNVTIP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE ++ + DEV ++ + AVNT++ R DGK IGYNTD GY G
Sbjct: 63 HKERIIPYLDEVDEQSKTVGAVNTVLIR--DGKWIGYNTDG-------------IGYVTG 107
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALA 384
L ++ GAGGA + +A
Sbjct: 108 LKQIYDDLKNAYILILGAGGASKGIA 133
>gi|154686826|ref|YP_001421987.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens FZB42]
gi|154352677|gb|ABS74756.1| AroD [Bacillus amyloliquefaciens FZB42]
Length = 280
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT ++R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNT-VKREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ P++ ++ GAGGA RA+
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAI 135
>gi|345302028|ref|YP_004823930.1| shikimate dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
gi|345111261|gb|AEN72093.1| Shikimate dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
Length = 297
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I A T+ L+ PV HS P++HN FR + +Y+ V D L + + + FA
Sbjct: 9 IRATTRPVALLGDPVAHSFSPLIHNTGFRTQGLDYVYLACRVPKDALPEAIAGLRALGFA 68
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK----LIGYNTDCEASITAIE 347
G +V P+KEAV D P A+AI AVNTI+ R +DG LIG NTD E
Sbjct: 69 GANVTIPHKEAVRPLLDRCTPRAEAIGAVNTIVCR-ADGSGTVALIGDNTDVE------- 120
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG 386
G+ L G V+ GAGGA RA+ +
Sbjct: 121 ------GFLEPLQPLADRLTGAEMVVLGAGGAARAVVYA 153
>gi|416125333|ref|ZP_11595931.1| shikimate dehydrogenase [Staphylococcus epidermidis FRI909]
gi|420199837|ref|ZP_14705507.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM031]
gi|319400930|gb|EFV89149.1| shikimate dehydrogenase [Staphylococcus epidermidis FRI909]
gi|394271244|gb|EJE15740.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM031]
Length = 269
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|394992034|ref|ZP_10384827.1| shikimate 5-dehydrogenase [Bacillus sp. 916]
gi|393807050|gb|EJD68376.1| shikimate 5-dehydrogenase [Bacillus sp. 916]
Length = 280
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT ++R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNT-VKREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ P++ ++ GAGGA RA+
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAI 135
>gi|375258959|ref|YP_005018129.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca KCTC 1686]
gi|365908437|gb|AEX03890.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca KCTC 1686]
Length = 255
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL---- 56
V NIT + T+IC PL+ +++ ++ +N GAD++E R+D + + +
Sbjct: 11 VKNITFQEGETLICVPLIGKTLAELQTNARALATAGADIIEWRVDHFTQVRETEQVLLAL 70
Query: 57 -EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
EI K +P+L +R K GG E + E A G D +D EL + I
Sbjct: 71 GEIRQLLKEIPLLFTFRSKKEGGETEISDEAYFELNRQAAVSGLTDVIDIELFNDEAQIR 130
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 131 SLVSDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 190
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 191 SATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAITQLREL 250
Query: 229 YKV 231
+
Sbjct: 251 MDI 253
>gi|417912227|ref|ZP_12555922.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU105]
gi|418621436|ref|ZP_13184212.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU123]
gi|420187201|ref|ZP_14693222.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM039]
gi|341651238|gb|EGS75043.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU105]
gi|374829380|gb|EHR93184.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU123]
gi|394256180|gb|EJE01113.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM039]
Length = 269
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|297571483|ref|YP_003697257.1| shikimate 5-dehydrogenase [Arcanobacterium haemolyticum DSM 20595]
gi|296931830|gb|ADH92638.1| shikimate 5-dehydrogenase [Arcanobacterium haemolyticum DSM 20595]
Length = 288
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
FGLI P+ HS P++HN +FR + + Y + V D+ ++ + AG +V P
Sbjct: 5 FGLIGDPIEHSLSPLIHNTSFRALGIDATYSLLEVPDHDVPSAIRSFKNLGIAGINVTMP 64
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YK AV+ E+ P A+ +VNT+ R D ++IG++TD + + DA
Sbjct: 65 YKRAVLPALHELTPTAELAQSVNTVAFR--DNQIIGHSTDGLGMLKPLRDA--------- 113
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
G L+ ++ G+GGAG ++A A GAR V
Sbjct: 114 ----GIDLSHEHILILGSGGAGTSVALAAAQSGARRVTL 148
>gi|73668461|ref|YP_304476.1| shikimate dehydrogenase [Methanosarcina barkeri str. Fusaro]
gi|121718714|sp|Q46DZ6.1|AROE_METBF RecName: Full=Shikimate dehydrogenase
gi|72395623|gb|AAZ69896.1| shikimate dehydrogenase [Methanosarcina barkeri str. Fusaro]
Length = 280
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+VFG+ P+ HS P +HN F + + IY V + L+K + F G ++
Sbjct: 3 QVFGVFGDPIAHSLSPAMHNAAFSALGMDCIYHAFRVKPEKLEKAILGAEAMGFGGLNLT 62
Query: 297 FPYKEAVMKF-CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P KE +K C + PLA+ I AVNTI+ + G++ GYNTD + A++++ E
Sbjct: 63 VPLKETALKLDCIKPDPLAEKIGAVNTIVFGET-GEIKGYNTDGLGAKQALQNSAVE--- 118
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
+ G V+ GAGGA R++AF + GA + I +
Sbjct: 119 ----------MEGSKIVVTGAGGAARSIAFQLAADGAEITIVN 151
>gi|423111497|ref|ZP_17099191.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca 10-5243]
gi|423112485|ref|ZP_17100176.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca 10-5245]
gi|376376696|gb|EHS89473.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca 10-5243]
gi|376390862|gb|EHT03544.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca 10-5245]
Length = 251
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL---- 56
V NIT + T+IC PL+ +++ ++ +N GAD++E R+D + + +
Sbjct: 7 VKNITFQEGETLICVPLIGKTLAELQTNARALATAGADIIEWRVDHFTQVRETEQVLLAL 66
Query: 57 -EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
EI K +P+L +R K GG E + E A G D +D EL + I
Sbjct: 67 GEIRQLLKEIPLLFTFRSKKEGGETEISDEAYFELNRQAAVSGLTDVIDIELFNDEAQIR 126
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 127 SLVSDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 186
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 187 SATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAITQLREL 246
Query: 229 YKV 231
+
Sbjct: 247 MDI 249
>gi|417647121|ref|ZP_12296970.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU144]
gi|420184568|ref|ZP_14690677.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM040]
gi|329725470|gb|EGG61953.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU144]
gi|394257219|gb|EJE02141.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM040]
Length = 269
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|226311576|ref|YP_002771470.1| shikimate 5-dehydrogenase [Brevibacillus brevis NBRC 100599]
gi|254806733|sp|C0ZB07.1|AROE_BREBN RecName: Full=Shikimate dehydrogenase
gi|226094524|dbj|BAH42966.1| shikimate 5-dehydrogenase [Brevibacillus brevis NBRC 100599]
Length = 283
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I + T++ GL PV HS+ P++HN F Y V+ +L+ + +
Sbjct: 2 ITSKTQLVGLFGHPVSHSQSPMMHNTAFLETGLGFAYAAFDVEPENLEDAVAGIRALGLK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V P+K A+M DE+ PLA+ I AVNT++ R DG+LIGYNTD
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTD 106
>gi|47096854|ref|ZP_00234434.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str.
1/2a F6854]
gi|254912797|ref|ZP_05262809.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937124|ref|ZP_05268821.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|386047892|ref|YP_005966224.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
gi|47014773|gb|EAL05726.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str.
1/2a F6854]
gi|258609726|gb|EEW22334.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|293590792|gb|EFF99126.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345534883|gb|AEO04324.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
Length = 289
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 24/173 (13%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSS 287
I+ T++ GLI PV HSK PI++N +F+ + Y+ V D K T+
Sbjct: 4 RISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF-- 61
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I +
Sbjct: 62 -NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLR 118
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI 399
DA +AG+ + GAGGA A+ GA+ + IF+I
Sbjct: 119 DA-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNI 158
>gi|417659556|ref|ZP_12309156.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU045]
gi|417908509|ref|ZP_12552266.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU037]
gi|418605463|ref|ZP_13168787.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU041]
gi|420183257|ref|ZP_14689390.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM049]
gi|420194893|ref|ZP_14700690.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM021]
gi|420214055|ref|ZP_14719335.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05005]
gi|420216205|ref|ZP_14721421.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05001]
gi|420220541|ref|ZP_14725500.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04008]
gi|420221619|ref|ZP_14726546.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH08001]
gi|420225792|ref|ZP_14730619.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH06004]
gi|420229699|ref|ZP_14734404.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04003]
gi|420232110|ref|ZP_14736752.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051668]
gi|420234757|ref|ZP_14739317.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051475]
gi|329735193|gb|EGG71485.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU045]
gi|341655870|gb|EGS79593.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU037]
gi|374402352|gb|EHQ73382.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU041]
gi|394249720|gb|EJD94933.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM049]
gi|394263953|gb|EJE08674.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM021]
gi|394283977|gb|EJE28138.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05005]
gi|394285894|gb|EJE29960.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04008]
gi|394290245|gb|EJE34109.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH08001]
gi|394292295|gb|EJE36054.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05001]
gi|394293226|gb|EJE36949.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH06004]
gi|394298993|gb|EJE42548.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04003]
gi|394301832|gb|EJE45286.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051668]
gi|394304000|gb|EJE47410.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051475]
Length = 269
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|397655932|ref|YP_006496634.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca E718]
gi|394344571|gb|AFN30692.1| 3-dehydroquinate dehydratase I [Klebsiella oxytoca E718]
Length = 251
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL---- 56
V NIT + T+IC PL+ +++ ++ +N GAD++E R+D + + +
Sbjct: 7 VKNITFQEGETLICVPLIGKTLAELQTNARALATAGADIIEWRVDHFTQVRETEQVLLAL 66
Query: 57 -EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
EI K +P+L +R K GG E + E A G D +D EL + I
Sbjct: 67 GEIRQLLKEIPLLFTFRSKKEGGETEISDEAYFELNRQAAVSGLTDVIDIELFNDEAQIR 126
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 127 SLVSDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 186
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 187 SATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAITQLREL 246
Query: 229 YKV 231
+
Sbjct: 247 MDI 249
>gi|307701915|ref|ZP_07638924.1| shikimate 5-dehydrogenase [Streptococcus mitis NCTC 12261]
gi|307616730|gb|EFN95918.1| shikimate 5-dehydrogenase [Streptococcus mitis NCTC 12261]
Length = 284
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F + NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATDTNGAYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVISYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRAL 383
SF ++G+ L GAGGA +++
Sbjct: 112 FKSLPSF--TISGKKMTLLGAGGAAKSI 137
>gi|281492349|ref|YP_003354329.1| shikimate 5-dehydrogenase [Lactococcus lactis subsp. lactis KF147]
gi|281376013|gb|ADA65504.1| Shikimate 5-dehydrogenase [Lactococcus lactis subsp. lactis KF147]
Length = 286
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
+IN T++ +++ P+ HS P +HN F N NG+Y+ V+ L + D
Sbjct: 2 NINGYTRMAAVVANPIKHSLSPFIHNLAFDLTNENGVYLAWEVEAEKLPAIVDNVRTLDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK ++ F DE+ P A+ I AVNT++ + GKLIG+NTD
Sbjct: 62 YGLNISMPYKTEIIPFMDELSPAAELIGAVNTVVNQ--SGKLIGHNTD 107
>gi|291616254|ref|YP_003518996.1| AroE [Pantoea ananatis LMG 20103]
gi|378768567|ref|YP_005197040.1| shikimate 5-dehydrogenase [Pantoea ananatis LMG 5342]
gi|386014647|ref|YP_005932924.1| shikimater dehydrogenase AroE [Pantoea ananatis AJ13355]
gi|291151284|gb|ADD75868.1| AroE [Pantoea ananatis LMG 20103]
gi|327392706|dbj|BAK10128.1| shikimater dehydrogenase AroE [Pantoea ananatis AJ13355]
gi|365188053|emb|CCF11003.1| Shikimate 5-dehydrogenase [Pantoea ananatis LMG 5342]
Length = 287
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +L+K + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGTAELEKVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V ++ D++ P AQ + AVNT++ +G L G+ TD
Sbjct: 63 LRGCNVSMPNKTEVCRYLDKLSPAAQLVGAVNTVVN--DNGVLTGHITDGT--------- 111
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
GY A G + G+ + GAGGA A+ A G + +
Sbjct: 112 ----GYMRALAEEGIDILGKKMTILGAGGAATAICVQAALDGVKAI 153
>gi|384176190|ref|YP_005557575.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595414|gb|AEP91601.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 280
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT +RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNT-VRREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
P++ F++ GAGGA RA+
Sbjct: 117 --------PISELSFLMIGAGGAARAI 135
>gi|417656004|ref|ZP_12305695.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|418665234|ref|ZP_13226684.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU081]
gi|420163035|ref|ZP_14669782.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM095]
gi|420167992|ref|ZP_14674644.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM087]
gi|329737254|gb|EGG73508.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|374409209|gb|EHQ80009.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU081]
gi|394234724|gb|EJD80298.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM095]
gi|394238020|gb|EJD83506.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM087]
Length = 269
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|404482073|ref|ZP_11017301.1| shikimate 5-dehydrogenase [Clostridiales bacterium OBRC5-5]
gi|404344769|gb|EJZ71125.1| shikimate 5-dehydrogenase [Clostridiales bacterium OBRC5-5]
Length = 289
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 16/163 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV-DDLKKFFSTYSSPDFAG 292
I+ADTKV+G+I PV HS PIL N + +N + Y V +++K+ + D G
Sbjct: 2 ISADTKVYGIIGNPVSHSLSPILQNTLAKEMNIDMSYSAFHVTENIKEAIKGAFALDIKG 61
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
F+V PYK+ ++ ++ A+ I A+NT+I+ + K GYNTD ++
Sbjct: 62 FNVTIPYKKDMLDIVSDIDDRAKKIGAINTLIKTENGYK--GYNTDIIGLGMSL------ 113
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
Y N + + G+ ++ GAGGA +A+ + A G + +
Sbjct: 114 --YNNSLS-----IKGKDIIILGAGGAAKAVLYLAIEEGVKSI 149
>gi|164688575|ref|ZP_02212603.1| hypothetical protein CLOBAR_02220 [Clostridium bartlettii DSM
16795]
gi|164602988|gb|EDQ96453.1| shikimate dehydrogenase [Clostridium bartlettii DSM 16795]
Length = 288
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ TKV+ +I PV S P +HN F + + +YV V D +K+
Sbjct: 4 ISSKTKVYSVIGHPVSQSFSPKIHNYLFEKYDIDAVYVSYDVNPDRVKEGIEGIRHLGIM 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VMK+ DE+ A+ AVNTI + DGKL GYNTD +I D
Sbjct: 64 GTNVTIPHKIEVMKYLDEIDKKAKLFGAVNTI--KNVDGKLYGYNTDGTGLTKSIRD--- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
S G + G+ ++ GAGGA R++A
Sbjct: 119 ---------SSGEDIKGKKVLIIGAGGACRSIAI 143
>gi|257866088|ref|ZP_05645741.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC30]
gi|257872419|ref|ZP_05652072.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC10]
gi|257800022|gb|EEV29074.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC30]
gi|257806583|gb|EEV35405.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC10]
Length = 286
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 2 ITGHTRLAALFAKPAKHSISPAMHNLSFEEQGTDAVYLAFDVEPDDLAASIQSIRQLDLL 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 62 GVNLSMPHKMAAVALMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ G + GAGGA A+ A G + +
Sbjct: 117 ----------IQVSILGDTMTVIGAGGAATAIISQAALDGVKTI 150
>gi|254826875|ref|ZP_05231562.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
gi|258599255|gb|EEW12580.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
Length = 289
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 24/173 (13%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSS 287
I+ T++ GLI PV HSK PI++N +F+ + Y+ V D K T+
Sbjct: 4 RISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF-- 61
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I +
Sbjct: 62 -NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLR 118
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI 399
DA +AG+ + GAGGA A+ GA+ + IF+I
Sbjct: 119 DA-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNI 158
>gi|288800100|ref|ZP_06405559.1| shikimate dehydrogenase [Prevotella sp. oral taxon 299 str. F0039]
gi|288333348|gb|EFC71827.1| shikimate dehydrogenase [Prevotella sp. oral taxon 299 str. F0039]
Length = 247
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGFPY 299
+GLI +GHS N F++ N + +Y+ + +++ F +S PD G +V PY
Sbjct: 4 YGLIGLKLGHSFSLNYFNEKFKNENIDAVYINYEISNIQDIFEIIASNPDLKGLNVTIPY 63
Query: 300 KEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
KE ++ + DEV P A AI AVN II + + L G+N+D +IE + ER +K
Sbjct: 64 KEQIIPYLDEVTPEATAIGAVNVVKIIHQENKTILKGFNSDVVGFTQSIEPLL-ERVHKK 122
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
++ G GG+ +A+AFG +S G V+
Sbjct: 123 A-------------LILGTGGSAKAIAFGLESLGLEVL 147
>gi|257875721|ref|ZP_05655374.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
gi|257809887|gb|EEV38707.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
Length = 286
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 2 ITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLDLL 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 62 GVNLSMPHKMAAVALMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
+ G + GAGGA A+ A G + +
Sbjct: 117 ----------IQVSIIGDTMTVIGAGGAATAIISQAALDGVKTI 150
>gi|347547878|ref|YP_004854206.1| putative shikimate 5-dehydrogenase [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346980949|emb|CBW84873.1| Putative shikimate 5-dehydrogenase [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 291
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ +G L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|363898039|ref|ZP_09324576.1| shikimate 5-dehydrogenase [Oribacterium sp. ACB7]
gi|361957684|gb|EHL10991.1| shikimate 5-dehydrogenase [Oribacterium sp. ACB7]
Length = 291
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS 287
K I+ +T+++GL+ PV HS P +HN FR ++ N Y+ V +L+ S
Sbjct: 2 KQWEIDGETRLYGLLGSPVLHSLSPFIHNEGFRRLSLNARYLAFRVGEKELEGTLSALRK 61
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
G ++ P KEAV+ CD + A ++VNT+I +G++ G +TD A+E
Sbjct: 62 MGVGGLNLTMPLKEAVLPLCDSLSKEAWLSSSVNTLI-FSENGEMTGSSTDGIGFFRALE 120
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
DA NG+ G+ L G GGAG+A+
Sbjct: 121 DA-------NGSTQ------GKRLCLMGLGGAGKAV 143
>gi|407925871|gb|EKG18845.1| Shikimate kinase [Macrophomina phaseolina MS6]
Length = 1614
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 144/329 (43%), Gaps = 29/329 (8%)
Query: 36 GADVVEIRLDCINNFQPGKD-----------LEIILTKKPLPVLIVYRPKWAGGLYEGDE 84
G D VE+R+D + + K+ + + ++ LP++ R + GG +
Sbjct: 1115 GVDAVELRVDLLQDPDSDKEGIPSADFIVDQVAWLRSQTSLPLIFTVRTQSQGGKFPDSA 1174
Query: 85 HKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEED-- 141
H+ LH LA L +++D E+ IL ++ S + ++ I S + T S D
Sbjct: 1175 HQEALQLHALAARLAIEFIDMEITFPDRIL-QEVSQFKGHSKIIASHHDPKGTLSWRDGS 1233
Query: 142 -LGYLVSRMQATGADIIKLVFSVNDIT-EIARIFQLLSHCQVPIIAYSVGERGLVSQLLS 199
+ YL +Q D+IK V N++ E R + + VP+IA ++G+ G +S++L+
Sbjct: 1234 WIQYLNRALQH--GDVIKAVGIDNNLDLEHFRSWAADTF-PVPLIALNMGDHGKLSRVLN 1290
Query: 200 PKFNGALVYGSLKGTPVLGLPTVESLRQTYKV-EHINADTKVFGLISKPVGHSKGPILHN 258
+F + + ++ G + +R + + + F + P+ HS+ P +
Sbjct: 1291 -RFLTPVTHPAMTTASAPGQLSAAEIRTARSLLGQSSTPPRRFFVAGSPISHSRSPAIFQ 1349
Query: 259 PTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIA 318
F Y + + +PDF G S+ P K+ ++ D V P +
Sbjct: 1350 RLFGDTGLPHTYTRLETTSAASLRTAIRAPDFGGASITIPLKQDIIPHLDAVGPEVAILG 1409
Query: 319 AVNTIIRR---PSDG----KLIGYNTDCE 340
AVNTI+ +DG +L+G NTD +
Sbjct: 1410 AVNTIVPERATTADGTTSTRLVGRNTDWQ 1438
>gi|312135613|ref|YP_004002951.1| shikimate 5-dehydrogenase [Caldicellulosiruptor owensensis OL]
gi|311775664|gb|ADQ05151.1| shikimate 5-dehydrogenase [Caldicellulosiruptor owensensis OL]
Length = 283
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFS-TYSSPDFAGFSVGFP 298
LI K + HS P +HN + + +Y + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFIHNRILSELGIDAVYSNVELSDFVKLKEFVEMVRKDKDVVGFNITIP 65
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE +++FCDEV + I A NT+ + +GKL+ YNTD G+K
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKKNGKLLAYNTDW-------------IGFKRS 110
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
G + + ++ G+GGA +A +G G + V
Sbjct: 111 LEDIGVDVKDKKILVLGSGGAAKACIYGLYRMGVKEV 147
>gi|402312231|ref|ZP_10831161.1| shikimate dehydrogenase [Lachnospiraceae bacterium ICM7]
gi|400370892|gb|EJP23874.1| shikimate dehydrogenase [Lachnospiraceae bacterium ICM7]
Length = 289
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV-DDLKKFFSTYSSPDFAG 292
I+ADTKV+G+I PV HS PIL N + +N + Y V +++K+ + D G
Sbjct: 2 ISADTKVYGIIGNPVSHSLSPILQNTLAKEMNIDMSYSAFHVTENIKEAIKGAFALDIKG 61
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
F+V PYK+ ++ ++ A+ I A+NT+I+ K GYNTD ++
Sbjct: 62 FNVTIPYKKDMLDIVSDIDERAKKIGAINTLIKTEKGYK--GYNTDIIGLGMSL------ 113
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
Y N + + G+ ++ GAGGA +A+ + A G + +
Sbjct: 114 --YNNSLS-----IKGKDIIILGAGGAAKAVLYLAIEEGVKSI 149
>gi|452965408|gb|EME70431.1| shikimate 5-dehydrogenase [Magnetospirillum sp. SO-1]
Length = 278
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ ++ G++ PV HS+ P LH ++ +G Y+P+ V DL+ F
Sbjct: 3 VSGKARLAGVLGWPVSHSRSPRLHGFWLEQLDIDGAYLPLPVAPGDLEAVIRALPRMGFR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAVM+ D + PLA+ I AVNT++ R DG L G NTD +
Sbjct: 63 GANVTVPHKEAVMRLVDHLDPLARRIGAVNTLVAR-DDGSLEGRNTDAYGFFENL----- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ G ++ +P +G V+ GAGGA RA+
Sbjct: 117 ----RQGCPAW-APASGPAAVI-GAGGASRAV 142
>gi|402845055|ref|ZP_10893402.1| 3-dehydroquinate dehydratase, type I [Klebsiella sp. OBRC7]
gi|423106410|ref|ZP_17094111.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca 10-5242]
gi|376377847|gb|EHS90614.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca 10-5242]
gi|402272655|gb|EJU21873.1| 3-dehydroquinate dehydratase, type I [Klebsiella sp. OBRC7]
Length = 251
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL---- 56
V NIT + T+IC PL+ +++ ++ +N GAD++E R+D + + +
Sbjct: 7 VKNITFQEGETLICVPLIGKTLAELQNNARALATAGADIIEWRVDHFTQVRETEQVLLAL 66
Query: 57 -EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVASNIL 113
EI K +P+L +R K GG E + E A G D +D EL + I
Sbjct: 67 GEIRQLLKEIPLLFTFRSKKEGGETEISDEAYFELNRQAAVSGLTDVIDIELFNDEAQIR 126
Query: 114 GKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEI- 169
+H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+ +
Sbjct: 127 SLVNDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVLTLL 186
Query: 170 -ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT 228
A + + P+I S+G+ G VS++ F A+ +G++ G + LR+
Sbjct: 187 SATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAITQLREL 246
Query: 229 YKV 231
+
Sbjct: 247 MDI 249
>gi|150402563|ref|YP_001329857.1| 3-dehydroquinate dehydratase, type I [Methanococcus maripaludis C7]
gi|166219207|sp|A6VGY0.1|AROD_METM7 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|150033593|gb|ABR65706.1| 3-dehydroquinate dehydratase, type I [Methanococcus maripaludis C7]
Length = 218
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 8/222 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++ ++V +++ +A G D+VE R+D + + E I +P +I
Sbjct: 1 MICIPVIDENVCDAINSAKEALKYG-DIVEFRVDLLKDVT----FEDIEEFSKVPSIITI 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI-LGKQYSSHQSGTRFIVSC 130
R +W GG ++ +++R+E L A A +VD ELK N+ L K + S T+ I+S
Sbjct: 56 RAEWEGGNWKKSDNERIELLKHAIKNNAKFVDIELKEERNLELVKYRNESNSNTKIIISY 115
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TP ++L +V + G DI K + + +I L++ IIA +GE
Sbjct: 116 HDFEKTPEIDELIEVVEKELKIG-DIAKFATFAHSKEDTLKILNLMNKYAGKIIAIGMGE 174
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL-GLPTVESLRQTYKV 231
G ++++L F L + S++G G V+ L++ K+
Sbjct: 175 SGKLTRILGLDFGSILTFASMEGKASAPGQVDVKKLKEILKL 216
>gi|301057611|ref|ZP_07198691.1| shikimate dehydrogenase [delta proteobacterium NaphS2]
gi|300448335|gb|EFK12020.1| shikimate dehydrogenase [delta proteobacterium NaphS2]
Length = 272
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
K++G++ PVGHS P +HN F ++ Y DLK + +G S+ P
Sbjct: 7 KIYGVLGNPVGHSLSPAMHNAAFEALDIPSFYGAFKTTDLKGCIRGMRALGISGMSITIP 66
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+K VM + D + PLA+ I AVNTI+ +G L GYNTD ++ A+E + G +
Sbjct: 67 FKTDVMAYLDALDPLAEQIGAVNTIVNE--NGLLRGYNTDGAGAMKALEAVVDPVGKR 122
>gi|242242874|ref|ZP_04797319.1| shikimate dehydrogenease [Staphylococcus epidermidis W23144]
gi|418615660|ref|ZP_13178599.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU118]
gi|418633499|ref|ZP_13195912.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU129]
gi|420174638|ref|ZP_14681087.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM061]
gi|420190210|ref|ZP_14696154.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM037]
gi|420192347|ref|ZP_14698207.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM023]
gi|420204514|ref|ZP_14710072.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM015]
gi|242233649|gb|EES35961.1| shikimate dehydrogenease [Staphylococcus epidermidis W23144]
gi|374816710|gb|EHR80909.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU118]
gi|374839252|gb|EHS02770.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU129]
gi|394244869|gb|EJD90201.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM061]
gi|394259101|gb|EJE03971.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM037]
gi|394261558|gb|EJE06355.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM023]
gi|394273524|gb|EJE17955.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM015]
Length = 269
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 21/148 (14%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
F +I P+ HS P++H+ F+ +N Y I VP V+ L+ S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVP--VNQLQDIKKIISEKGIDGFNVT 60
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 61 IPHKERIIPYLDDINEQAKSVGAVNTVLIK--DGKWIGYNTDG-------------IGYV 105
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 106 NGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|404412569|ref|YP_006698156.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
gi|404238268|emb|CBY59669.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
Length = 291
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G +V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGCNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD 398
A G + G+ + GAGGA A+ A G + + IF+
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN 161
>gi|384172242|ref|YP_005553619.1| shikimate 5-dehydrogenase [Arcobacter sp. L]
gi|345471852|dbj|BAK73302.1| shikimate 5-dehydrogenase [Arcobacter sp. L]
Length = 264
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 18/161 (11%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 297
TK F + PV HSK P + N +++N++GIY + D + + +++G ++
Sbjct: 2 TKKFVIFGNPVEHSKSPQMQNAGLKYINFDGIYEKHHLIDGNIIKNIFLENNYSGANITV 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+KE + D V +A+ I AVNT I + DGK++ YNTD + AIE
Sbjct: 62 PHKEFAYENADIVEGIAKEIKAVNTYILK--DGKVVAYNTDAPGFLKAIE---------- 109
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
SFG + +L GAGG +A++ K + +V + +
Sbjct: 110 ---SFGKV---KNVLLLGAGGTAKAISLALKEKNIKVTVLN 144
>gi|291545243|emb|CBL18352.1| shikimate 5-dehydrogenase [Ruminococcus champanellensis 18P13]
Length = 281
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 297
++ +GLI P+GHS P LH F + Y + + + G++V
Sbjct: 2 SEAYGLIGHPLGHSMSPFLHKALFALGGKDASYRLLDLAPETMEQQVQDMTGYLGWNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
PYKE ++ D + P A AVN + R P DG L GYNTDC + A+ D
Sbjct: 62 PYKERIIPLLDRLDPSAARYNAVNCVRREP-DGTLTGYNTDCTGFLHAVRD--------- 111
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
L GR+ +L G GGAGR +A A + GA++ I
Sbjct: 112 ------FSLGGRVLLL-GCGGAGRMMATEAATAGAQLTI 143
>gi|167524479|ref|XP_001746575.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774845|gb|EDQ88471.1| predicted protein [Monosiga brevicollis MX1]
Length = 1520
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 155/371 (41%), Gaps = 25/371 (6%)
Query: 37 ADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHL 93
A VE+R+D + + + I + P++ R + GG Y G K L +
Sbjct: 1031 AQAVELRVDLLASLTEDYIATQVAAIRSATKSPIIFTVRTEPQGGRYAGSPAKYAALLRV 1090
Query: 94 AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATG 153
LG + VD E + S+ L + + T + S + ++L + G
Sbjct: 1091 GIRLGCEIVDVEADLPSDELRQLTRLVPASTTLLGSLHFLRPCGGAQELTAALHNCALGG 1150
Query: 154 -ADIIKLVFSVN---DITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGALVY 208
AD++K++F+ + D + +++L P I ++G+ G ++++L+ + + +
Sbjct: 1151 RADLLKVIFTADTPGDALALVEAYRVLRGTLSRPAIVMAMGQAGKLTRVLNDQLT-PVTH 1209
Query: 209 GSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNG 268
L G T + L + E + F L +P+ S P++HN F +
Sbjct: 1210 RLLTTAAAPGQLTAQQL-DDMRAELGLFPKRNFFLFGEPIALSASPLMHNTVFADLKLPY 1268
Query: 269 IYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPS 328
Y + + + G SV P KE + +V + I AVNTI+ + S
Sbjct: 1269 TYQRCSTSNALDAITCLQGTNCGGGSVTMPLKERLGHVLVDVDVPGRVIGAVNTIV-KDS 1327
Query: 329 DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAK 388
G+L G+NTD + A+ DA G+P A R ++ GAGG RA + +
Sbjct: 1328 QGQLHGFNTDYLGILAALRDA-------------GAPSAPRAALVLGAGGTARAAVYALQ 1374
Query: 389 SRGA-RVVIFD 398
G R+V+ +
Sbjct: 1375 QLGCHRIVVVN 1385
>gi|420177912|ref|ZP_14684246.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM057]
gi|420181401|ref|ZP_14687602.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM053]
gi|394246317|gb|EJD91577.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM053]
gi|394247099|gb|EJD92347.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM057]
Length = 269
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPFNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|167043755|gb|ABZ08447.1| putative Shikimate / quinate 5-dehydrogenase [uncultured marine
crenarchaeote HF4000_APKG3B16]
Length = 273
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
+ + +I P+ HS P +HN FRH+ + Y+ + +L + AGF+V
Sbjct: 2 SNTYAVIGDPIDHSLSPNIHNAAFRHLKLDHTYIAYKIPAGELSAGIEALKAIKIAGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K +MKF DE+ + I AVNT++ DGKL GYNTD + D IK++
Sbjct: 62 TIPHKIEMMKFLDEMDTTCKIIGAVNTVLNE--DGKLKGYNTD----MIGFLDPIKKKNL 115
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFD 398
+ +L GAGGA RA+ K + +++ I +
Sbjct: 116 ---------TIKDSQVLLLGAGGAARAIVTAMVKEKASKITIVN 150
>gi|134045782|ref|YP_001097268.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C5]
gi|132663407|gb|ABO35053.1| shikimate dehydrogenase [Methanococcus maripaludis C5]
Length = 280
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 17/154 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ TK+ GLI PV HS PI+HN + N Y+ V ++LK + + A
Sbjct: 3 IDSKTKLLGLIGHPVDHSFSPIMHNAAIEDLGINYRYLAFDVSEENLKDVVAGAKAFQIA 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD + A+E+
Sbjct: 63 GFNITIPHKMNIMKYLDEIDDDAKAIGAVNTV--KIENGKAIGYNTDGIGAKKALEE--- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
K G + ++ G+GG RA+++
Sbjct: 118 ----KTGILIN------KNILIIGSGGGSRAVSY 141
>gi|441472052|emb|CCQ21807.1| Shikimate dehydrogenase [Listeria monocytogenes]
gi|441475188|emb|CCQ24942.1| Shikimate dehydrogenase [Listeria monocytogenes N53-1]
Length = 283
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAG 292
I+ T++ GLI PV HSK PI++N +F+ + Y+ +K + + G
Sbjct: 4 RISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTIKAI----KTFNLRG 59
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
+V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + DA
Sbjct: 60 ANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA--- 114
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI 399
+AG+ + GAGGA A+ GA+ + IF+I
Sbjct: 115 ----------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNI 152
>gi|325262925|ref|ZP_08129661.1| shikimate dehydrogenase [Clostridium sp. D5]
gi|324032019|gb|EGB93298.1| shikimate dehydrogenase [Clostridium sp. D5]
Length = 276
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAG 292
N + FG++ +GHS P +H R N G Y + ++ + + G
Sbjct: 5 NKEPLHFGVLGNQLGHSLSPEIHEDLLRQQNICGTYKKYELNENEAPHILEVMKAENIRG 64
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
+V PYKE + + D + P A+ I AVNTI+ + DGK GYNTD +++
Sbjct: 65 MNVTMPYKEVIYQLMDVLDPHAEKIGAVNTILMK--DGKFYGYNTDYIGAVSMF------ 116
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
+K+G + LAGR V+ G+GGA + L +G GA
Sbjct: 117 --HKDGVS-----LAGREIVILGSGGAAKGLIYGFHMDGA 149
>gi|239905373|ref|YP_002952112.1| shikimate dehydrogenase [Desulfovibrio magneticus RS-1]
gi|239795237|dbj|BAH74226.1| shikimate dehydrogenase [Desulfovibrio magneticus RS-1]
Length = 274
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVG 296
++FG+I P+GH+ P++HN F + Y P +DL F AG SV
Sbjct: 2 QLFGIIGHPLGHTLSPLVHNWGFSRYGLDARYEAWPTPPEDLPAFMERLRQTPIAGASVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCE 340
P+K AVM F DEV L QA AVNT+ R DG+L+G NTD E
Sbjct: 62 IPHKTAVMAFVDEVTDLGQAAGAVNTLYWR--DGRLVGDNTDVE 103
>gi|386080684|ref|YP_005994209.1| shikimate 5-dehydrogenase [Pantoea ananatis PA13]
gi|354989865|gb|AER33989.1| shikimate 5-dehydrogenase AroE [Pantoea ananatis PA13]
Length = 287
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +L+K + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGTAELEKVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V ++ D + P AQ + AVNT++ +G L G+ TD
Sbjct: 63 LRGCNVSMPNKTEVCRYLDTLSPAAQLVGAVNTVVN--DNGVLTGHITDGT--------- 111
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395
GY A G + G+ + GAGGA A+ A G + +
Sbjct: 112 ----GYMRALAEEGIDILGKKMTILGAGGAATAICVQAALDGVKAI 153
>gi|449882801|ref|ZP_21784811.1| shikimate 5-dehydrogenase [Streptococcus mutans SA38]
gi|449250446|gb|EMC48505.1| shikimate 5-dehydrogenase [Streptococcus mutans SA38]
Length = 289
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINVSMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|418977324|ref|ZP_13525148.1| shikimate dehydrogenase [Streptococcus mitis SK575]
gi|383350027|gb|EID27931.1| shikimate dehydrogenase [Streptococcus mitis SK575]
Length = 284
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 19/148 (12%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRAL 383
SF + G+ L GAGGA +++
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSI 137
>gi|357238003|ref|ZP_09125341.1| shikimate dehydrogenase [Streptococcus ictaluri 707-05]
gi|356753249|gb|EHI70367.1| shikimate dehydrogenase [Streptococcus ictaluri 707-05]
Length = 293
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E + + + L++ P HS P +HN ++ +N + Y+ V D+ +
Sbjct: 3 ERLTGHSLLVALLANPARHSLSPKMHNAAYKLLNLDYAYMAFEVEQDNFPDAVQAIRALG 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V PYKEA++ F DE+ PLA+ + AVNT++ + G L+GYNTD ++ ++ +A
Sbjct: 63 IRGANVSMPYKEAIIPFLDEISPLAKLVGAVNTVVNKDGKGHLVGYNTDGRGAVQSLLEA 122
>gi|410466400|ref|ZP_11319313.1| shikimate 5-dehydrogenase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409980778|gb|EKO37456.1| shikimate 5-dehydrogenase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 274
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVG 296
++FG+I P+GH+ P++HN F + Y P ++L F AG SV
Sbjct: 2 QLFGIIGHPLGHTLSPLVHNWGFSRYGLDARYEAWPTPPEELPAFMERLRQTPIAGVSVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCE 340
P+K AVM F DEV L QA AVNT+ R DG+LIG NTD E
Sbjct: 62 IPHKTAVMAFVDEVSELGQAAGAVNTLYWR--DGRLIGDNTDVE 103
>gi|406576618|ref|ZP_11052245.1| shikimate 5-dehydrogenase [Streptococcus sp. GMD6S]
gi|404461165|gb|EKA07142.1| shikimate 5-dehydrogenase [Streptococcus sp. GMD6S]
Length = 284
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRMAAVVANPIKHSISPFIHNSAFEATATNGVYVAWEIEASDLAETVTNIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ F DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPFLDELSDEARLIGAVNTVVNH--NGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRAL 383
SF ++G+ + GAGGA +++
Sbjct: 112 FKSLPSF--TISGKKMAILGAGGAAKSI 137
>gi|449888246|ref|ZP_21787208.1| shikimate 5-dehydrogenase [Streptococcus mutans SA41]
gi|449251490|gb|EMC49501.1| shikimate 5-dehydrogenase [Streptococcus mutans SA41]
Length = 289
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINVSMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|402829491|ref|ZP_10878367.1| putative shikimate dehydrogenase [Slackia sp. CM382]
gi|402284472|gb|EJU32975.1| putative shikimate dehydrogenase [Slackia sp. CM382]
Length = 439
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
+ + FGL+ P+GHS P +H Y+ + + D+L+ FF+ + F G +V
Sbjct: 2 NDRKFGLVGHPLGHSYSPRIHE-LLGSTPYD--LIDIAEDELEPFFARRA---FDGVNVT 55
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYK A + D+ A+AI VNT+++RP DG L G+NTD + G+
Sbjct: 56 IPYKVAALSLVDDASEAARAIGCVNTVVKRP-DGTLFGHNTDYD-------------GFA 101
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD 398
S G+ + GR + G GGA RA+ + +G AR+++FD
Sbjct: 102 YLIDSLGADIDGRTAAVFGNGGATRAVLAVLRDKGAARIIVFD 144
>gi|150005076|ref|YP_001299820.1| shikimate 5-dehydrogenase [Bacteroides vulgatus ATCC 8482]
gi|294778884|ref|ZP_06744300.1| putative shikimate 5-dehydrogenase [Bacteroides vulgatus PC510]
gi|319642584|ref|ZP_07997231.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_40A]
gi|345520174|ref|ZP_08799574.1| shikimate 5-dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|423311983|ref|ZP_17289920.1| shikimate 5-dehydrogenase [Bacteroides vulgatus CL09T03C04]
gi|149933500|gb|ABR40198.1| shikimate 5-dehydrogenase [Bacteroides vulgatus ATCC 8482]
gi|254836003|gb|EET16312.1| shikimate 5-dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|294447193|gb|EFG15777.1| putative shikimate 5-dehydrogenase [Bacteroides vulgatus PC510]
gi|317385818|gb|EFV66750.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_40A]
gi|392689362|gb|EIY82640.1| shikimate 5-dehydrogenase [Bacteroides vulgatus CL09T03C04]
Length = 246
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGF 297
K +GLI P+GHS N F N + YV + +K+ S ++PD G +V
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGLNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A AI AVN I+R+ +LIGYN+D +IE ++
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTRLIGYNSDVIGFTQSIEPLLE---- 117
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
P + +L G GGA +A+A+G K G
Sbjct: 118 ---------PQHKKALIL-GTGGASKAIAYGLKKLG 143
>gi|449926476|ref|ZP_21800776.1| shikimate 5-dehydrogenase [Streptococcus mutans 4SM1]
gi|449160628|gb|EMB63880.1| shikimate 5-dehydrogenase [Streptococcus mutans 4SM1]
Length = 289
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINVSMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|450005451|ref|ZP_21826659.1| shikimate 5-dehydrogenase [Streptococcus mutans NMT4863]
gi|450115679|ref|ZP_21864050.1| shikimate 5-dehydrogenase [Streptococcus mutans ST1]
gi|449188527|gb|EMB90234.1| shikimate 5-dehydrogenase [Streptococcus mutans NMT4863]
gi|449227765|gb|EMC27168.1| shikimate 5-dehydrogenase [Streptococcus mutans ST1]
Length = 289
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINVSMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|449915234|ref|ZP_21796124.1| shikimate 5-dehydrogenase [Streptococcus mutans 15JP3]
gi|449931324|ref|ZP_21802310.1| shikimate 5-dehydrogenase [Streptococcus mutans 3SN1]
gi|450012333|ref|ZP_21829578.1| shikimate 5-dehydrogenase [Streptococcus mutans A19]
gi|450022773|ref|ZP_21830143.1| shikimate 5-dehydrogenase [Streptococcus mutans U138]
gi|450040070|ref|ZP_21836580.1| shikimate 5-dehydrogenase [Streptococcus mutans T4]
gi|450077268|ref|ZP_21850339.1| shikimate 5-dehydrogenase [Streptococcus mutans N3209]
gi|450104852|ref|ZP_21859485.1| shikimate 5-dehydrogenase [Streptococcus mutans SF14]
gi|450143825|ref|ZP_21873657.1| shikimate 5-dehydrogenase [Streptococcus mutans 1ID3]
gi|449151543|gb|EMB55275.1| shikimate 5-dehydrogenase [Streptococcus mutans 1ID3]
gi|449156700|gb|EMB60159.1| shikimate 5-dehydrogenase [Streptococcus mutans 15JP3]
gi|449162862|gb|EMB65983.1| shikimate 5-dehydrogenase [Streptococcus mutans 3SN1]
gi|449188480|gb|EMB90188.1| shikimate 5-dehydrogenase [Streptococcus mutans A19]
gi|449194495|gb|EMB95850.1| shikimate 5-dehydrogenase [Streptococcus mutans U138]
gi|449199524|gb|EMC00585.1| shikimate 5-dehydrogenase [Streptococcus mutans T4]
gi|449211458|gb|EMC11862.1| shikimate 5-dehydrogenase [Streptococcus mutans N3209]
gi|449225323|gb|EMC24930.1| shikimate 5-dehydrogenase [Streptococcus mutans SF14]
Length = 289
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINVSMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|15673739|ref|NP_267913.1| shikimate 5-dehydrogenase [Lactococcus lactis subsp. lactis Il1403]
gi|385831235|ref|YP_005869048.1| shikimate 5-dehydrogenase [Lactococcus lactis subsp. lactis CV56]
gi|13878332|sp|Q9CES7.1|AROE_LACLA RecName: Full=Shikimate dehydrogenase
gi|12724778|gb|AAK05855.1|AE006405_9 shikimate 5-dehydrogenase [Lactococcus lactis subsp. lactis Il1403]
gi|326407243|gb|ADZ64314.1| shikimate 5-dehydrogenase [Lactococcus lactis subsp. lactis CV56]
Length = 286
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
+IN T++ +++ P+ HS P +HN F N NG+Y+ V+ L + D
Sbjct: 2 NINGYTRMAAVVANPIKHSLSPFIHNLAFDLTNENGVYLAWEVEAEKLPAIVDNVRTLDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK + F DE+ P A+ I AVNT++ + GKLIG+NTD
Sbjct: 62 YGLNISMPYKTEITPFMDELSPAAELIGAVNTVVNQ--SGKLIGHNTD 107
>gi|423099141|ref|ZP_17086849.1| putative shikimate dehydrogenase [Listeria innocua ATCC 33091]
gi|370794376|gb|EHN62151.1| putative shikimate dehydrogenase [Listeria innocua ATCC 33091]
Length = 291
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRH--VNYNGIYVPMFVDDLKKFFSTYSSPD 289
+ I+ T++ LI PV HSK PI++N +F+ ++Y + + V + + + +
Sbjct: 5 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 64
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V+K+ DE+ P A+ I AVNTII DGKL G+ TD
Sbjct: 65 LRGSNVTMPCKSEVLKYMDELSPAARMIGAVNTIINE--DGKLTGHITDG---------- 112
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI 399
G+ + G +AG+ + GAGGA A+ GA+ + IF+I
Sbjct: 113 ---LGFASNLRDSGVDMAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNI 160
>gi|388580067|gb|EIM20385.1| Pentafunctional AroM protein [Wallemia sebi CBS 633.66]
Length = 1530
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 172/393 (43%), Gaps = 42/393 (10%)
Query: 24 QVLSNMYQAKAEGADVVEIRLDCINN--------FQPGKD-----LEIILTKKPLPVLIV 70
+ L M Q A G D +E+R+D ++ P D L + LP++
Sbjct: 1016 EALPIMDQLSA-GIDALEVRVDLLSEDGKAPTVPSVPSADYVSAQLSALRQCTSLPIIYT 1074
Query: 71 YRPKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
R GG+ ++ + + AL L LG++++D EL + +++ + G I++
Sbjct: 1075 VRTHSQGGMIPDEKFEDIAALIELGIALGSEFIDVELNLPDSLIDDVV--KRKGNSKIIA 1132
Query: 130 CNLDCETPSEEDLGYLVSRMQATGA---DIIKLVFSVNDITEIARIFQLLSHCQV--PII 184
D + D + S+ + GA D++KLV N + + + LS P++
Sbjct: 1133 SMHDFPGNYKWDSTEM-SQKYSQGAKYGDVVKLVGRANSLEDNFETSKFLSKLPASPPVL 1191
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFG 242
A++VG G +S++ N L + + P P S ++ + ++ D+K F
Sbjct: 1192 AFNVGVIGQLSRIQ----NYVLTPVTHELLPSKAAPGQLSFKEIQQALNLTGQLDSKKFY 1247
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLK-KFFSTYSSPDFAGFSVGFPYKE 301
L P+ S+ P LHN F+ + +Y + L SPDF G SV P+K
Sbjct: 1248 LFGCPIQQSQSPTLHNTGFQQLGLPYVYSLHEREQLDGSVDQILESPDFGGASVTIPHKV 1307
Query: 302 AVMKFCDEVHPLAQAIAAVNTI-IRRPSDGK--LIGYNTDCEASITAIEDAIKERGYKNG 358
++ + A+AI AVNTI +R +GK L G NTD +A + + ++ +G
Sbjct: 1308 GILNKIHTLSMPAKAIGAVNTIVVREDVNGKRELFGDNTDWQAIKSCAQSSV------DG 1361
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
+ AG ++ GAGG RA + + G
Sbjct: 1362 SDPITKESAG---LVIGAGGTCRAALYALHALG 1391
>gi|354582185|ref|ZP_09001087.1| shikimate 5-dehydrogenase [Paenibacillus lactis 154]
gi|353199584|gb|EHB65046.1| shikimate 5-dehydrogenase [Paenibacillus lactis 154]
Length = 284
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 18/148 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
G++ P+GHSK P +HN +N G Y+P+ + + L + + F G +V P
Sbjct: 13 LGVMGDPIGHSKSPAMHNAALAALNLQGAYIPLHIRPERLGDAIESVKTLGFRGVNVTIP 72
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKERGYKN 357
+K VM++ D + A I AVNTI+ +G+L GYNTD + ++ E+A +
Sbjct: 73 HKVEVMRYLDAIDEGAARIGAVNTIVN--DNGRLTGYNTDGIGYVRSLKEEACPD----- 125
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAF 385
L G+ + GAGGA R + +
Sbjct: 126 --------LKGKRIAVLGAGGAARGIIY 145
>gi|150400882|ref|YP_001324648.1| shikimate 5-dehydrogenase [Methanococcus aeolicus Nankai-3]
gi|166219472|sp|A6UU64.1|AROE_META3 RecName: Full=Shikimate dehydrogenase
gi|150013585|gb|ABR56036.1| shikimate 5-dehydrogenase [Methanococcus aeolicus Nankai-3]
Length = 278
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 17/152 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN+ TK+ GLI PV HS P +HN + + N +Y+ V ++LK + + +
Sbjct: 2 INSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGWK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K +MK+ D++ A+ I AVNT+ + + K IGYNTD + +IE+ I
Sbjct: 62 GFNITIPHKIEIMKYLDKIDNDAKLIGAVNTV--KIENNKAIGYNTDGIGARLSIEEIIG 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
E N ++ GAGG+ RA+
Sbjct: 120 EVKDYN-------------ILVIGAGGSSRAV 138
>gi|452994696|emb|CCQ93699.1| Shikimate dehydrogenase [Clostridium ultunense Esp]
Length = 287
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 19/169 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+++ T ++GL PV HS P++ F +N +Y+ + + LK+ +
Sbjct: 7 VDSKTSLYGLFGNPVAHSLSPVMQQAAFMERGFNAVYLAFAIQKEKLKEAVEAIRALSIQ 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYK V+ F DEV A I AVNTI + G+L GYNTD + I ++E+
Sbjct: 67 GVNVTIPYKVEVIPFLDEVEEEASIIGAVNTI--KNEGGRLRGYNTDGKGFIRSLEEEFH 124
Query: 352 -ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD 398
+ NGT + GAGGA R++A +G R+ I +
Sbjct: 125 PDWSSMNGT-------------ILGAGGAVRSVAVALARKGVKRITIVN 160
>gi|297596795|ref|NP_001043079.2| Os01g0375400 [Oryza sativa Japonica Group]
gi|255673244|dbj|BAF04993.2| Os01g0375400 [Oryza sativa Japonica Group]
Length = 194
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%)
Query: 96 DLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGAD 155
+LG +YVD ELKVA + Y S + IVS + TPS E+L LV+R+QA GAD
Sbjct: 2 ELGVNYVDIELKVADKFISFIYGSKPEKCKLIVSAHNYESTPSCEELADLVARIQAVGAD 61
Query: 156 IIKLVFSVNDITEIARIFQLLSHCQ 180
I+K+ + NDI +++++FQ++ HCQ
Sbjct: 62 IVKIATTANDIVDVSQMFQVMVHCQ 86
>gi|386759165|ref|YP_006232381.1| shikimate 5-dehydrogenase [Bacillus sp. JS]
gi|384932447|gb|AFI29125.1| shikimate 5-dehydrogenase [Bacillus sp. JS]
Length = 280
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIKALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ + AVNT +RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNT-VRREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
P++ F++ GAGGA RA+
Sbjct: 117 --------PISELSFLMIGAGGAARAI 135
>gi|291279498|ref|YP_003496333.1| shikimate 5-dehydrogenase [Deferribacter desulfuricans SSM1]
gi|290754200|dbj|BAI80577.1| shikimate 5-dehydrogenase [Deferribacter desulfuricans SSM1]
Length = 265
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKF--FSTYSSPDFAGFSVGFP 298
+ LI PV HS PI+HN + N YV VD+ + F F + +F GF++ P
Sbjct: 4 YCLIGNPVKHSLSPIIHNFFIFNSKINAGYVAFEVDE-RDFENFVKFLRLNFDGFNITLP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YK+ + K+ DEV +A I AVN + + SDGKL G+NTD + E
Sbjct: 63 YKQKIFKYLDEVDDVAYEIGAVNCV--KVSDGKLTGFNTDYYGIVKTFE----------- 109
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
F L + V+ G GGA R L + K + + +I
Sbjct: 110 --LFNVDLFDKEIVVVGCGGAARPLFYYLKGKPYKNLI 145
>gi|449095061|ref|YP_007427552.1| shikimate 5-dehydrogenase [Bacillus subtilis XF-1]
gi|449028976|gb|AGE64215.1| shikimate 5-dehydrogenase [Bacillus subtilis XF-1]
Length = 280
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLENAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ + AVNT +RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNT-VRREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
P++ F++ GAGGA RA+
Sbjct: 117 --------PISELSFLMIGAGGAARAI 135
>gi|386762617|ref|YP_006236253.1| shikimate 5-dehydrogenase [Helicobacter cinaedi PAGU611]
gi|385147634|dbj|BAM13142.1| shikimate 5-dehydrogenase [Helicobacter cinaedi PAGU611]
Length = 263
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
+ F + P+ HSK P+LHN F N Y + +++ K ++ + +G ++ P
Sbjct: 3 RFFAVYGNPIAHSKSPLLHNHAFSRCAINAFYGRLLLENGKDLRKSFKAHRLSGANITIP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE + CDEV +A+ I A NT +R + K+IGYNTD + +++D +K
Sbjct: 63 FKETAYRQCDEVCGIAKEIGACNTWVRE--NEKIIGYNTDAQGFYESVKD------FKMS 114
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
A ++ GAGG+ +A+A K+ I +
Sbjct: 115 NA-----------LILGAGGSAKAVATILKTHNISTTIIN 143
>gi|367477867|ref|ZP_09477203.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 285]
gi|365269803|emb|CCD89671.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 285]
Length = 293
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + Y + V LK FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGVRCHYQLIEVAGADRAGLKMLLEGVRQLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV++ DE+ P A A+ AVNT++ R DG+LIG+NTD T E A+ +
Sbjct: 75 YPYKEAVVELLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDT----TGFERAVAPLVAQ 128
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID 400
+G + L GAGG G+A+AF + G A + I+D +
Sbjct: 129 SGRG---------VVALIGAGGVGKAIAFALANLGVAGLRIYDTE 164
>gi|450000576|ref|ZP_21825234.1| shikimate 5-dehydrogenase [Streptococcus mutans N29]
gi|450061918|ref|ZP_21844042.1| shikimate 5-dehydrogenase [Streptococcus mutans NLML5]
gi|449185673|gb|EMB87550.1| shikimate 5-dehydrogenase [Streptococcus mutans N29]
gi|449206500|gb|EMC07202.1| shikimate 5-dehydrogenase [Streptococcus mutans NLML5]
Length = 289
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPETELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINVSMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|449935880|ref|ZP_21803662.1| shikimate 5-dehydrogenase [Streptococcus mutans 2ST1]
gi|450153132|ref|ZP_21877057.1| shikimate 5-dehydrogenase [Streptococcus mutans 21]
gi|449166016|gb|EMB68975.1| shikimate 5-dehydrogenase [Streptococcus mutans 2ST1]
gi|449239371|gb|EMC38096.1| shikimate 5-dehydrogenase [Streptococcus mutans 21]
Length = 289
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPETELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G +V PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINVSMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|347521045|ref|YP_004778616.1| shikimate 5-dehydrogenase [Lactococcus garvieae ATCC 49156]
gi|385832426|ref|YP_005870201.1| shikimate 5-dehydrogenase [Lactococcus garvieae Lg2]
gi|343179613|dbj|BAK57952.1| shikimate 5-dehydrogenase [Lactococcus garvieae ATCC 49156]
gi|343181579|dbj|BAK59917.1| shikimate 5-dehydrogenase [Lactococcus garvieae Lg2]
Length = 288
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPD 289
IN T++ +++ P+ HS P +HN F + N +Y+ ++D L++ + + D
Sbjct: 2 EINGYTRMAAVLAHPIKHSLSPFIHNLAFELTDENAVYLAWELEDEKMLEQTINNVRTLD 61
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI 346
G ++ PYK+ ++F DE+ A+ I AVNTI+ + GKL+GYNTD + +A+
Sbjct: 62 MYGLNISMPYKQKAVEFIDELSEEAKLIGAVNTIVNQ--KGKLVGYNTDGQGFFSAL 116
>gi|85859661|ref|YP_461863.1| 3-dehydroquinate dehydratase [Syntrophus aciditrophicus SB]
gi|85722752|gb|ABC77695.1| 3-dehydroquinate dehydratase [Syntrophus aciditrophicus SB]
Length = 372
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 19/214 (8%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII--LTKKPLPVLIV 70
IC P++ ++ + ++ A A AD++E+RLD I + G E++ + + P PV IV
Sbjct: 107 ICIPVVGSERDEAIRQIH-AAAPLADLLELRLDLI---EEGSLKELVGEIRRNPFPVKIV 162
Query: 71 ---YRPKWAGGLY----EGDEHKRLEALHLAEDLGADYVDFELK---VASNILGKQYSSH 120
R + +G L E E R+ L A LG DYVD EL V + L + + H
Sbjct: 163 ATHRRREESGSLQTPGEEIAEEARIAVLKEAILLGVDYVDIELSTSPVLRDSLNELIAEH 222
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
T+ I+SC+ ETPS+ L L + GA +IK+V + + R+ +L+
Sbjct: 223 LGRTQLIISCHNFHETPSDAALEDLWRGCREAGARVIKIVTFARTMADNLRVLRLIPWSL 282
Query: 181 ---VPIIAYSVGERGLVSQLLSPKFNGALVYGSL 211
I+A+S+GE G +S+++SP + SL
Sbjct: 283 GKGQEIVAFSMGELGKISRVMSPLLGAHFTFASL 316
>gi|418325526|ref|ZP_12936732.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU071]
gi|365228128|gb|EHM69313.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU071]
Length = 269
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIS 133
>gi|288560500|ref|YP_003423986.1| shikimate 5-dehydrogenase AroE [Methanobrevibacter ruminantium M1]
gi|288543210|gb|ADC47094.1| shikimate 5-dehydrogenase AroE [Methanobrevibacter ruminantium M1]
Length = 298
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ TK+ G+I P+ H+ P + N +N N IY+P V D+L +
Sbjct: 2 VDGKTKILGVIGDPIEHTFSPAMQNAGLEALNLNYIYLPFHVKSDNLNSAIEGAKTLGIR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLI---GYNTDCEASITAIED 348
G +V P+K V+ DEV P+A I AVNTI + + I GYNTD + AIE+
Sbjct: 62 GLNVTIPHKREVITCLDEVDPIANMIGAVNTIKFDYDENEGISTKGYNTDAYGCLRAIEE 121
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
+ + + + GAGGA RA+AF S
Sbjct: 122 K--------------ASVKDKKITIVGAGGASRAIAFQMAS 148
>gi|147920135|ref|YP_686101.1| putative 3-dehydroquinate dehydratase (class I) [Methanocella
arvoryzae MRE50]
gi|121683041|sp|Q0W4B8.1|AROD_UNCMA RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|110621497|emb|CAJ36775.1| putative 3-dehydroquinate dehydratase (class I) [Methanocella
arvoryzae MRE50]
Length = 219
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 31 QAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEA 90
+A A GADVVE+R+D + PG +E I P+++ RPK+ GG ++G + +R++
Sbjct: 19 EAIALGADVVEVRVDLVGGDGPGL-VESIYYDIGCPIIVTIRPKFEGGEFDGTDAERVQL 77
Query: 91 LHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF--IVSCNLDCETPSEEDLGYLVSR 148
AD+ DFEL+ A N+ + + +GT IVS + TPS E++ +++R
Sbjct: 78 FKKLTPY-ADFADFELR-AKNL--DELLTTITGTDAVPIVSYHDFDRTPSNEEMLSIINR 133
Query: 149 MQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVY 208
GA I KL D+T++ R+ ++ + P+ S+G G S+L++P + L Y
Sbjct: 134 SVEKGA-IGKLAVMPKDMTDVLRLLEITLKSKRPVCTISMGSLGQHSRLVAPVYGSLLTY 192
Query: 209 GSLKGTPVLGLPTVESLRQTYKV 231
G ++ G V+ L + ++
Sbjct: 193 GYVRRPVAPGQIRVDQLLEGLRI 215
>gi|420206086|ref|ZP_14711596.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM008]
gi|394277925|gb|EJE22242.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM008]
Length = 269
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 21/148 (14%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
F +I P+ HS P++H+ F+ +N Y I VP V+ + S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVP--VNQFQNIKKIISEKSIDGFNVT 60
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 61 IPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGYV 105
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALA 384
NG + ++ GAGGA + +A
Sbjct: 106 NGLKQIYEGIEDAYILILGAGGASKGIA 133
>gi|298675580|ref|YP_003727330.1| shikimate 5-dehydrogenase [Methanohalobium evestigatum Z-7303]
gi|298288568|gb|ADI74534.1| shikimate 5-dehydrogenase [Methanohalobium evestigatum Z-7303]
Length = 275
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 297
VFG+ PV HS P +HN F + + IY VD L+ + ++ F G ++
Sbjct: 4 VFGVFGDPVEHSLSPDMHNAAFSELGMDSIYHAFRVDKKSLEYALNGANAMGFGGVNITV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P K+ +KF + PLA I AVNTI R ++ +IGYNTD + AI DA
Sbjct: 64 PLKQEALKFVN-TDPLASKIGAVNTIDFR-NENDMIGYNTDGVGARRAIADA-------- 113
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396
G + + ++ GAGGA RA+ F + GA ++I
Sbjct: 114 -----GVDVKNKNILILGAGGASRAICFQFANDGADLII 147
>gi|384214801|ref|YP_005605965.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 6]
gi|354953698|dbj|BAL06377.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 6]
Length = 292
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 21/153 (13%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + G Y + V L+ FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRGHYQLIEVAGADAAGLRMMLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV+ DE+ P A A+ AVNT++ R DG+LIG+NTD G+
Sbjct: 75 YPYKEAVVPLLDELAPGAAAMGAVNTVVAR--DGRLIGHNTDTT-------------GFA 119
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
A +P +G + G GG G+A+AF S
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALAS 151
>gi|374635112|ref|ZP_09706716.1| 3-dehydroquinate dehydratase, type I [Methanotorris formicicus
Mc-S-70]
gi|373563302|gb|EHP89501.1| 3-dehydroquinate dehydratase, type I [Methanotorris formicicus
Mc-S-70]
Length = 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 10/230 (4%)
Query: 4 VNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK 63
+++ KN MIC P++ ++ L N +A E AD+VE R+D + D +I
Sbjct: 1 MHLVKN--MICIPIVDNNIGTALKNAKKA-LEVADIVEFRVDMLKEV----DESVIEEMA 53
Query: 64 PLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI-LGKQYSSHQS 122
P +I R W GG ++ +R++ + A + A +VD EL+ N L K S
Sbjct: 54 KFPCIITVRAYWEGGFWKKSNDERIKLIKKAIECNAKFVDIELREEKNKELVKFRDEIGS 113
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP 182
T+ I+S + +TPS E+L +V G DI K ++ ++ +++ +
Sbjct: 114 KTKIIISYHDFEKTPSYEELIKIVEDGLKIG-DITKFAVMARGKEDVLKVLNVINKYEGE 172
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL-GLPTVESLRQTYKV 231
II ++GE G ++++L F L + S++G G V+ L++ +++
Sbjct: 173 IIGIAMGEEGKLTRILGVHFGSILTFASMEGKASAPGQIDVKKLKEIWEL 222
>gi|77409004|ref|ZP_00785724.1| shikimate 5-dehydrogenase [Streptococcus agalactiae COH1]
gi|421148001|ref|ZP_15607673.1| shikimate 5-dehydrogenase [Streptococcus agalactiae GB00112]
gi|77172388|gb|EAO75537.1| shikimate 5-dehydrogenase [Streptococcus agalactiae COH1]
gi|401685339|gb|EJS81347.1| shikimate 5-dehydrogenase [Streptococcus agalactiae GB00112]
Length = 292
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 16/171 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
+ +N +T + GLI+ P HS P++ N +F+ N N Y+ V++ L + +
Sbjct: 1 MNSLNGETLLTGLIANPARHSLSPLMWNTSFQEKNMNYAYLTFEVEEGKLTEAVRGVRAL 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G +V P+K++V+ D++ P A+ + AVNTI+ + G+L+G+ TD A+
Sbjct: 61 SIRGVNVSMPFKQSVIPLLDDLSPQAKLVGAVNTIVNQGGTGRLVGHMTDGIGCFKAL-- 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD 398
A+ G ++ +AG GG+G+A+A A G A + +F+
Sbjct: 119 -----------AAQGFSAKNKIITIAGIGGSGKAVAVQAAMEGVAEIRLFN 158
>gi|387786412|ref|YP_006251508.1| shikimate 5-dehydrogenase [Streptococcus mutans LJ23]
gi|449920582|ref|ZP_21798566.1| shikimate 5-dehydrogenase [Streptococcus mutans 1SM1]
gi|449951268|ref|ZP_21808616.1| shikimate 5-dehydrogenase [Streptococcus mutans 11SSST2]
gi|379132813|dbj|BAL69565.1| shikimate 5-dehydrogenase [Streptococcus mutans LJ23]
gi|449158678|gb|EMB62090.1| shikimate 5-dehydrogenase [Streptococcus mutans 1SM1]
gi|449166457|gb|EMB69395.1| shikimate 5-dehydrogenase [Streptococcus mutans 11SSST2]
Length = 289
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|219848736|ref|YP_002463169.1| shikimate 5-dehydrogenase [Chloroflexus aggregans DSM 9485]
gi|219542995|gb|ACL24733.1| shikimate 5-dehydrogenase [Chloroflexus aggregans DSM 9485]
Length = 285
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 17/106 (16%)
Query: 243 LISKPVGHSKGPILHNPT---------FRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
LI PV HS+ P +HN +R V + +P + DL++ +F G
Sbjct: 13 LIGDPVAHSRSPAMHNAALAALGIAARYRAVQTSAAELPQRIADLRRA-------EFLGA 65
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDC 339
+V P+K+AVM DE+ P+A I AVNTIIR+P DG+L+G NTD
Sbjct: 66 NVTLPHKQAVMALLDEIEPIAARIGAVNTIIRQP-DGRLVGTNTDA 110
>gi|397649475|ref|YP_006490002.1| shikimate 5-dehydrogenase [Streptococcus mutans GS-5]
gi|392603044|gb|AFM81208.1| shikimate 5-dehydrogenase [Streptococcus mutans GS-5]
Length = 289
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|289432356|ref|YP_003462229.1| shikimate 5-dehydrogenase [Dehalococcoides sp. GT]
gi|452203313|ref|YP_007483446.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi DCMB5]
gi|288946076|gb|ADC73773.1| shikimate 5-dehydrogenase [Dehalococcoides sp. GT]
gi|452110372|gb|AGG06104.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi DCMB5]
Length = 286
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDTLDPAAKKIGAVNTIVN--ENGQLKGYNTDFGGFVRLLEH--------N 117
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
A A F L GAGG+ A++ + G + +
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVL 152
>gi|221310491|ref|ZP_03592338.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|221314815|ref|ZP_03596620.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319737|ref|ZP_03601031.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324015|ref|ZP_03605309.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|255767590|ref|NP_390444.2| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|418032255|ref|ZP_12670738.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|430756355|ref|YP_007208894.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915012|ref|ZP_21963638.1| shikimate dehydrogenase [Bacillus subtilis MB73/2]
gi|251757241|sp|P54374.2|AROE_BACSU RecName: Full=Shikimate dehydrogenase
gi|225185218|emb|CAB14508.2| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|351471118|gb|EHA31239.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959814|dbj|BAM53054.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7613]
gi|407965389|dbj|BAM58628.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7003]
gi|430020875|gb|AGA21481.1| Shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115360|gb|EME05756.1| shikimate dehydrogenase [Bacillus subtilis MB73/2]
Length = 280
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ + AVNT +RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNT-VRREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
P++ F++ GAGGA RA+
Sbjct: 117 --------PISELSFLMIGAGGAARAI 135
>gi|452992543|emb|CCQ95970.1| Shikimate dehydrogenase [Clostridium ultunense Esp]
Length = 288
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
IN + V+ LI P+ S PI++N ++ + N IY+ V DL + + +
Sbjct: 3 INFNKDVYCLIGNPIAKSLSPIINNSYYKIIGKNNIYLAFNVKEKDLADVINVFKILNIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K ++M+ D + A+ + AVNT+ + +G+LIGYNTD + ++E ++
Sbjct: 63 GFNVTLPHKISIMEHLDSISDEAKILGAVNTV--KNKNGRLIGYNTDGMGFLKSLE--LE 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
+ G K+ T ++ GAGGA A++ G + +I
Sbjct: 119 DVGVKDKTV-----------LVLGAGGAANAISISLAKEGVKKIII 153
>gi|430813754|emb|CCJ28929.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1586
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 166/389 (42%), Gaps = 31/389 (7%)
Query: 18 MAQSVEQVLSNMYQAKAEGADVVEIRLDC------INNFQPGK----DLEIILTKKPLPV 67
+A S Q L ++ G D +E+R+D IN + K + ++ K P+
Sbjct: 1067 LALSDIQNLYHLLDDITIGCDAIELRIDLFQKQKGINKYPSLKYIAEQISLLRQKTNFPL 1126
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
+ R GG + +E + + LG +++D +L + + + K T+ I
Sbjct: 1127 IYTLRTTDHGGSFVFEEKIAKKIILHGAKLGVEFIDIQLNMPTKLF-KIIQDSWPYTKII 1185
Query: 128 VSCNLDCETP-SEEDLGYLVSRMQATG-ADIIKLV---FSVNDITEIARIFQLLSHCQVP 182
S + E P S +D ++ +A I+KLV S D + + +++ ++P
Sbjct: 1186 ASFH-SIEKPISCDDFEWIQKYKEAQQHGHIVKLVGMSTSFEDNFLLKEFKKKIAYEKIP 1244
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFG 242
I + G G +S++++ F + + L LG +++ + + + + F
Sbjct: 1245 SIIINTGINGQLSRIINV-FMTPVTHSLLSSKTALGQLSIKDINIALHIMGLLPKKEYF- 1302
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEA 302
L P+ HS+ P +HN F + + Y + + + + S +F G SV P K +
Sbjct: 1303 LFGSPIKHSQSPNIHNLGFEILGFPHKYQLFETNSINELKNILYSDNFGGASVTAPLKTS 1362
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTA 360
+ DE+ A I AVNTI + +GK L G NTD + + I ++IK
Sbjct: 1363 IPVLLDELSDEAVLIGAVNTITKIHKNGKHILKGENTDWQGIVKVITNSIK--------- 1413
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
F L G + GAGGA RA + S
Sbjct: 1414 -FEKSLKGFSGFIIGAGGASRAAIYALLS 1441
>gi|73748307|ref|YP_307546.1| shikimate 5-dehydrogenase [Dehalococcoides sp. CBDB1]
gi|123620202|sp|Q3ZZN3.1|AROE_DEHSC RecName: Full=Shikimate dehydrogenase
gi|73660023|emb|CAI82630.1| shikimate 5-dehydrogenase [Dehalococcoides sp. CBDB1]
Length = 286
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDTLDPAAKKIGAVNTIVN--ENGQLKGYNTDFGGFVRLLE--------HN 117
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
A A F L GAGG+ A++ + G + +
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVL 152
>gi|449876764|ref|ZP_21782947.1| shikimate 5-dehydrogenase [Streptococcus mutans S1B]
gi|449903010|ref|ZP_21791863.1| shikimate 5-dehydrogenase [Streptococcus mutans M230]
gi|449251868|gb|EMC49867.1| shikimate 5-dehydrogenase [Streptococcus mutans S1B]
gi|449261745|gb|EMC59210.1| shikimate 5-dehydrogenase [Streptococcus mutans M230]
Length = 289
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLKNIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|293374270|ref|ZP_06620598.1| shikimate dehydrogenase [Turicibacter sanguinis PC909]
gi|325844817|ref|ZP_08168269.1| shikimate dehydrogenase [Turicibacter sp. HGF1]
gi|292647103|gb|EFF65085.1| shikimate dehydrogenase [Turicibacter sanguinis PC909]
gi|325489004|gb|EGC91392.1| shikimate dehydrogenase [Turicibacter sp. HGF1]
Length = 262
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
K F +I P+ HS P +H F + Y V +L+K D GF+V P
Sbjct: 2 KRFAVIGNPIVHSLSPCMHRANFLALGIEASYELKQVLNLEKEMKDLKQLD--GFNVTLP 59
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YK+ ++ F D+V P+A+AI AVNT+ + +GKL+GYNTD + G+
Sbjct: 60 YKQMIIPFLDDVDPIAKAIGAVNTV--KNVNGKLMGYNTDVD-------------GFFES 104
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
L + +L GAGGA RA+ F G
Sbjct: 105 FQGLNVKLDASILIL-GAGGAARAVYFALIKNG 136
>gi|290580754|ref|YP_003485146.1| shikimate 5-dehydrogenase [Streptococcus mutans NN2025]
gi|449969555|ref|ZP_21813295.1| shikimate 5-dehydrogenase [Streptococcus mutans 2VS1]
gi|450030481|ref|ZP_21833233.1| shikimate 5-dehydrogenase [Streptococcus mutans G123]
gi|450034943|ref|ZP_21834731.1| shikimate 5-dehydrogenase [Streptococcus mutans M21]
gi|450059166|ref|ZP_21843372.1| shikimate 5-dehydrogenase [Streptococcus mutans NLML4]
gi|450071571|ref|ZP_21848189.1| shikimate 5-dehydrogenase [Streptococcus mutans M2A]
gi|450093201|ref|ZP_21856484.1| shikimate 5-dehydrogenase [Streptococcus mutans W6]
gi|450109380|ref|ZP_21861402.1| shikimate 5-dehydrogenase [Streptococcus mutans SM6]
gi|450147739|ref|ZP_21875237.1| shikimate 5-dehydrogenase [Streptococcus mutans 14D]
gi|450164455|ref|ZP_21881376.1| shikimate 5-dehydrogenase [Streptococcus mutans B]
gi|254997653|dbj|BAH88254.1| putative shikimate 5-dehydrogenase [Streptococcus mutans NN2025]
gi|449174074|gb|EMB76590.1| shikimate 5-dehydrogenase [Streptococcus mutans 2VS1]
gi|449192762|gb|EMB94169.1| shikimate 5-dehydrogenase [Streptococcus mutans G123]
gi|449196059|gb|EMB97357.1| shikimate 5-dehydrogenase [Streptococcus mutans M21]
gi|449203233|gb|EMC04105.1| shikimate 5-dehydrogenase [Streptococcus mutans NLML4]
gi|449212231|gb|EMC12605.1| shikimate 5-dehydrogenase [Streptococcus mutans M2A]
gi|449217420|gb|EMC17475.1| shikimate 5-dehydrogenase [Streptococcus mutans W6]
gi|449226270|gb|EMC25820.1| shikimate 5-dehydrogenase [Streptococcus mutans SM6]
gi|449236599|gb|EMC35509.1| shikimate 5-dehydrogenase [Streptococcus mutans 14D]
gi|449241930|gb|EMC40540.1| shikimate 5-dehydrogenase [Streptococcus mutans B]
Length = 289
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|253578605|ref|ZP_04855877.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850923|gb|EES78881.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 290
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
+ +I T + L+ PV HS P++HN +FR + + +Y+ V++ L + +
Sbjct: 1 MNNITGHTGLTALLGSPVAHSISPLMHNESFRLLGLDYVYLCFDVNEETLPAAVAGLKTC 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
GF++ P K +++ DE+ P AQ I AVNT++ +GKLIGYNTD + ++ D
Sbjct: 61 GIRGFNLTMPNKNKIVELLDELSPEAQLIGAVNTVLN--DNGKLIGYNTDGYGFMQSVRD 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIF 397
A G + G+ + G GGA A+ A A A V IF
Sbjct: 119 A-------------GHDITGKNITVMGVGGASMAICAQSALDGAASVHIF 155
>gi|449959277|ref|ZP_21810110.1| shikimate 5-dehydrogenase [Streptococcus mutans 4VF1]
gi|450066804|ref|ZP_21846205.1| shikimate 5-dehydrogenase [Streptococcus mutans NLML9]
gi|450131644|ref|ZP_21869605.1| shikimate 5-dehydrogenase [Streptococcus mutans NLML8]
gi|450138025|ref|ZP_21871946.1| shikimate 5-dehydrogenase [Streptococcus mutans NLML1]
gi|450160743|ref|ZP_21880171.1| shikimate 5-dehydrogenase [Streptococcus mutans 66-2A]
gi|450176179|ref|ZP_21885633.1| shikimate 5-dehydrogenase [Streptococcus mutans SM1]
gi|449153650|gb|EMB57300.1| shikimate 5-dehydrogenase [Streptococcus mutans NLML8]
gi|449169291|gb|EMB72070.1| shikimate 5-dehydrogenase [Streptococcus mutans 4VF1]
gi|449208603|gb|EMC09187.1| shikimate 5-dehydrogenase [Streptococcus mutans NLML9]
gi|449234473|gb|EMC33479.1| shikimate 5-dehydrogenase [Streptococcus mutans NLML1]
gi|449239687|gb|EMC38398.1| shikimate 5-dehydrogenase [Streptococcus mutans 66-2A]
gi|449245741|gb|EMC44069.1| shikimate 5-dehydrogenase [Streptococcus mutans SM1]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|450101665|ref|ZP_21859134.1| shikimate 5-dehydrogenase [Streptococcus mutans SF1]
gi|450170612|ref|ZP_21883576.1| shikimate 5-dehydrogenase [Streptococcus mutans SM4]
gi|449219888|gb|EMC19830.1| shikimate 5-dehydrogenase [Streptococcus mutans SF1]
gi|449245510|gb|EMC43845.1| shikimate 5-dehydrogenase [Streptococcus mutans SM4]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|449976326|ref|ZP_21816174.1| shikimate 5-dehydrogenase [Streptococcus mutans 11VS1]
gi|449175724|gb|EMB78116.1| shikimate 5-dehydrogenase [Streptococcus mutans 11VS1]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|16801401|ref|NP_471669.1| shikimate 5-dehydrogenase [Listeria innocua Clip11262]
gi|16414861|emb|CAC97565.1| lin2338 [Listeria innocua Clip11262]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRH--VNYNGIYVPMFVDDLKKFFSTYSSPD 289
+ I+ T++ LI PV HSK PI++N +F+ ++Y + + V + + + +
Sbjct: 3 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V+K+ DE+ P A+ I AVNTII DGKL G+ TD
Sbjct: 63 LRGSNVTMPCKSEVLKYMDELSPAARMIGAVNTIINE--DGKLTGHITDG---------- 110
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI 399
G+ + G +AG+ + GAGGA A+ GA+ + IF+I
Sbjct: 111 ---LGFASNLRDSGVDVAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNI 158
>gi|449911002|ref|ZP_21794957.1| shikimate 5-dehydrogenase [Streptococcus mutans OMZ175]
gi|449258816|gb|EMC56375.1| shikimate 5-dehydrogenase [Streptococcus mutans OMZ175]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|450087456|ref|ZP_21854284.1| shikimate 5-dehydrogenase [Streptococcus mutans NV1996]
gi|449217884|gb|EMC17911.1| shikimate 5-dehydrogenase [Streptococcus mutans NV1996]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAANLIGAVNTIVNR--DGRLIGYNTD 107
>gi|384160214|ref|YP_005542287.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|384165143|ref|YP_005546522.1| shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
gi|384169284|ref|YP_005550662.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens XH7]
gi|328554302|gb|AEB24794.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|328912698|gb|AEB64294.1| Shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
gi|341828563|gb|AEK89814.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens XH7]
Length = 280
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ +LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALKDKNINGQYFAFQVEPHNLKDAVNGIKALGICGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+ A+ + AVNT ++R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIDESAKVLGAVNT-VKREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ P++ ++ GAGGA RA+
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAI 135
>gi|449891047|ref|ZP_21787699.1| shikimate 5-dehydrogenase [Streptococcus mutans SF12]
gi|449898371|ref|ZP_21790572.1| shikimate 5-dehydrogenase [Streptococcus mutans R221]
gi|449964936|ref|ZP_21811584.1| shikimate 5-dehydrogenase [Streptococcus mutans 15VF2]
gi|449980390|ref|ZP_21817166.1| shikimate 5-dehydrogenase [Streptococcus mutans 5SM3]
gi|449990533|ref|ZP_21821601.1| shikimate 5-dehydrogenase [Streptococcus mutans NVAB]
gi|449996731|ref|ZP_21823706.1| shikimate 5-dehydrogenase [Streptococcus mutans A9]
gi|450122096|ref|ZP_21866598.1| shikimate 5-dehydrogenase [Streptococcus mutans ST6]
gi|449172034|gb|EMB74676.1| shikimate 5-dehydrogenase [Streptococcus mutans 15VF2]
gi|449177002|gb|EMB79322.1| shikimate 5-dehydrogenase [Streptococcus mutans 5SM3]
gi|449181622|gb|EMB83697.1| shikimate 5-dehydrogenase [Streptococcus mutans NVAB]
gi|449182759|gb|EMB84770.1| shikimate 5-dehydrogenase [Streptococcus mutans A9]
gi|449228357|gb|EMC27730.1| shikimate 5-dehydrogenase [Streptococcus mutans ST6]
gi|449256912|gb|EMC54723.1| shikimate 5-dehydrogenase [Streptococcus mutans SF12]
gi|449259887|gb|EMC57403.1| shikimate 5-dehydrogenase [Streptococcus mutans R221]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|449943970|ref|ZP_21806556.1| shikimate 5-dehydrogenase [Streptococcus mutans 11A1]
gi|449148940|gb|EMB52767.1| shikimate 5-dehydrogenase [Streptococcus mutans 11A1]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|284802683|ref|YP_003414548.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284995825|ref|YP_003417593.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|404414320|ref|YP_006699907.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
gi|284058245|gb|ADB69186.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284061292|gb|ADB72231.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|404240019|emb|CBY61420.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC7179]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 24/173 (13%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSS 287
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 4 RISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTF-- 61
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I +
Sbjct: 62 -NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLR 118
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI 399
DA +AG+ + GAGGA A+ GA+ + IF+I
Sbjct: 119 DA-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNI 158
>gi|450179959|ref|ZP_21886919.1| shikimate 5-dehydrogenase [Streptococcus mutans 24]
gi|449248681|gb|EMC46912.1| shikimate 5-dehydrogenase [Streptococcus mutans 24]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|51893090|ref|YP_075781.1| shikimate 5-dehydrogenase [Symbiobacterium thermophilum IAM 14863]
gi|81692083|sp|Q67N06.1|AROE_SYMTH RecName: Full=Shikimate dehydrogenase
gi|51856779|dbj|BAD40937.1| shikimate 5-dehydrogenase [Symbiobacterium thermophilum IAM 14863]
Length = 294
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTF----RHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
++ G++ PV HS P +HN F H Y VP L+K + + G +
Sbjct: 13 RILGILGHPVAHSASPAMHNAAFAAQGMHAMYGAFDVP--PSQLEKAIAGIRALGLLGVN 70
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+KEAVM + D+V P A+ + AVNTI+ R G+LIGYNTD + ++E ERG
Sbjct: 71 VTIPHKEAVMAYLDDVAPTARQVGAVNTIVNR--GGRLIGYNTDGWGFLLSLE----ERG 124
Query: 355 YK 356
+
Sbjct: 125 VR 126
>gi|404496252|ref|YP_006720358.1| shikimate 5-dehydrogenase [Geobacter metallireducens GS-15]
gi|418066477|ref|ZP_12703839.1| shikimate 5-dehydrogenase [Geobacter metallireducens RCH3]
gi|123572109|sp|Q39VU8.1|AROE_GEOMG RecName: Full=Shikimate dehydrogenase
gi|78193859|gb|ABB31626.1| shikimate 5-dehydrogenase [Geobacter metallireducens GS-15]
gi|373560348|gb|EHP86613.1| shikimate 5-dehydrogenase [Geobacter metallireducens RCH3]
Length = 286
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T+V G+I PV HS P++ N + + IYVP V +DL + + +
Sbjct: 3 ITGKTRVLGIIGWPVAHSLSPLMQNAALEAMGLDWIYVPFAVRPEDLASAVAGLRTLGVS 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
GF+V P+K A++ D + P A+ + AVNT+ R D L+GYNTD E I ++ +
Sbjct: 63 GFNVTIPHKTAIIPLLDRITPEARLMGAVNTVKREGDD--LVGYNTDGEGFIRSLAE 117
>gi|24379237|ref|NP_721192.1| shikimate 5-dehydrogenase [Streptococcus mutans UA159]
gi|449863143|ref|ZP_21778074.1| shikimate 5-dehydrogenase [Streptococcus mutans U2B]
gi|449872198|ref|ZP_21781406.1| shikimate 5-dehydrogenase [Streptococcus mutans 8ID3]
gi|449984613|ref|ZP_21819159.1| shikimate 5-dehydrogenase [Streptococcus mutans NFSM2]
gi|450081563|ref|ZP_21851803.1| shikimate 5-dehydrogenase [Streptococcus mutans N66]
gi|81744250|sp|Q8DUW3.1|AROE_STRMU RecName: Full=Shikimate dehydrogenase
gi|24377151|gb|AAN58498.1|AE014919_6 putative shikimate 5-dehydrogenase [Streptococcus mutans UA159]
gi|449154663|gb|EMB58228.1| shikimate 5-dehydrogenase [Streptococcus mutans 8ID3]
gi|449180031|gb|EMB82213.1| shikimate 5-dehydrogenase [Streptococcus mutans NFSM2]
gi|449215147|gb|EMC15362.1| shikimate 5-dehydrogenase [Streptococcus mutans N66]
gi|449265126|gb|EMC62453.1| shikimate 5-dehydrogenase [Streptococcus mutans U2B]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGINGVYVAWDIPESELQVTLKNIMRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINISMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTD 107
>gi|118475038|ref|YP_892296.1| shikimate 5-dehydrogenase [Campylobacter fetus subsp. fetus 82-40]
gi|424820946|ref|ZP_18245984.1| shikimate 5-dehydrogenase [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118414264|gb|ABK82684.1| shikimate 5-dehydrogenase [Campylobacter fetus subsp. fetus 82-40]
gi|342327725|gb|EGU24209.1| shikimate 5-dehydrogenase [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 261
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 18/160 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
K F + P+ HS P LHN + G Y + ++D + +T++ + +G +V P
Sbjct: 2 KYFAVFGNPINHSISPRLHNLALQGYGLAGFYGRVHLEDGLELINTFNKLELSGANVTVP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE V+ CDE+ A++I ++NT+++R +GK+ GYNTD + AI + +K+
Sbjct: 62 FKEIVLNQCDEIDETAKSIGSLNTLVKR--NGKIFGYNTDAPGFMLAISE------FKDI 113
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
++ ++ GAGG RA+ + + G V I +
Sbjct: 114 ESA----------LILGAGGTARAICYILQKNGIDVEILN 143
>gi|1303789|dbj|BAA12445.1| AroD [Bacillus subtilis]
Length = 280
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ + AVNT +RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNT-VRREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL 383
P++ F++ GAGGA RA+
Sbjct: 117 --------PISELSFLMIGAGGAARAI 135
>gi|57234701|ref|YP_181209.1| shikimate 5-dehydrogenase [Dehalococcoides ethenogenes 195]
gi|123618900|sp|Q3Z990.1|AROE_DEHE1 RecName: Full=Shikimate dehydrogenase
gi|57225149|gb|AAW40206.1| shikimate 5-dehydrogenase [Dehalococcoides ethenogenes 195]
Length = 286
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+FGLI PV HS P + N F+H + +Y+ + ++L+ ++ + G +V
Sbjct: 8 LFGLIGFPVSHSVSPAMQNAAFKHCKLDYLYLTIAAKPEELQNVIASMGPLNIRGLNVTI 67
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDSLDPAAEKIGAVNTIVN--ENGRLKGYNTDFGGFVRLLE--------HN 117
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397
A A + F L GAGG+ A+A + G + +
Sbjct: 118 RIAP-----AKQRFTLLGAGGSAHAIALAVCNLGGHLTVL 152
>gi|417934921|ref|ZP_12578241.1| shikimate dehydrogenase [Streptococcus mitis bv. 2 str. F0392]
gi|340771491|gb|EGR94006.1| shikimate dehydrogenase [Streptococcus mitis bv. 2 str. F0392]
Length = 284
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 19/157 (12%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRMAAVVANPIKHSISPFIHNKAFEATAANGVYVAWEIEAGDLAETIANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
SF ++ + + GAGGA +++ A GA
Sbjct: 112 FKSLPSFA--ISDKKMTILGAGGAAKSILAQAILDGA 146
>gi|422882560|ref|ZP_16929016.1| shikimate dehydrogenase [Streptococcus sanguinis SK355]
gi|332359428|gb|EGJ37248.1| shikimate dehydrogenase [Streptococcus sanguinis SK355]
Length = 284
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
IN T++ +++KP+ HS P++HN F + NG+Y+ V+ DL+ D
Sbjct: 2 RINGHTRMAAVVAKPIKHSISPLIHNMAFEKTDVNGVYLAWEVEAKDLQASIENIRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
G ++ PYK+ V+ + DE+ A+ I AVNT++ + +G L+GYNTD
Sbjct: 62 FGVNLSMPYKQEVIPYLDELDVSARLIGAVNTVVNK--NGILVGYNTD 107
>gi|434394200|ref|YP_007129147.1| shikimate dehydrogenase [Gloeocapsa sp. PCC 7428]
gi|428266041|gb|AFZ31987.1| shikimate dehydrogenase [Gloeocapsa sp. PCC 7428]
Length = 287
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G++ PV HS P +HN H+ + +Y+P+ V + L F+ ++ +
Sbjct: 2 ITGKTKLLGVMGYPVEHSMSPAMHNAAIAHLKLDYVYLPLSVKPEALTTAFAGLAAINCT 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
GF+V P+K+A++ E+ P+AQA+ AVNT+ R+ +G NTD + ++D
Sbjct: 62 GFNVTIPHKQAILPLLSEISPVAQAVGAVNTVWRQ--GDAWVGTNTDIVGFLAPLQD 116
>gi|421728299|ref|ZP_16167454.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca M5al]
gi|410370980|gb|EKP25706.1| 3-dehydroquinate dehydratase [Klebsiella oxytoca M5al]
Length = 255
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 20/246 (8%)
Query: 3 VVNIT--KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
V NIT + T+IC PL+ +++ ++ +N GAD++E R+D +F +++E IL
Sbjct: 11 VKNITFQEGETLICVPLIGKTLAELQTNARALATAGADIIEWRVD---HFTQVREIEQIL 67
Query: 61 TK--------KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFEL-KVAS 110
+P+L +R K GG E + E A G D +D EL +
Sbjct: 68 LALGEIRQLLDAIPLLFTFRSKKEGGETEISDEAYFELNRQAAVSGLTDVIDIELFNDEA 127
Query: 111 NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDIT 167
I +H +G + I+S + +TP++ED+ Y + RMQ GAD+ K+ S D+
Sbjct: 128 QIRSLVNDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQDVL 187
Query: 168 EI--ARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESL 225
+ A + + P+I S+G+ G VS++ F A+ +G++ G + L
Sbjct: 188 TLLSATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAITQL 247
Query: 226 RQTYKV 231
R+ +
Sbjct: 248 RELMDI 253
>gi|404329984|ref|ZP_10970432.1| shikimate dehydrogenase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 304
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-FVDDLKKFFSTYSSPDFAG 292
I+ T+++GL + P HS P++HN +FR N +Y+ D + + G
Sbjct: 5 IDGRTRLYGLFAHPAVHSLSPLMHNLSFRRRQINAVYLAFDITSDFSDAIRSIRQLNMGG 64
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
++ P+K+ V+ + +E+ P A+ + AVNT++ R G LIG NTD T ++
Sbjct: 65 VNLSMPFKKQVIPYLNELTPTAKMVGAVNTVVHR--QGHLIGANTDG----TGFFANLRA 118
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391
R Y L G+ + GAGGAG ++ S G
Sbjct: 119 RHYT---------LRGKTATVLGAGGAGLSIIAAGASEG 148
>gi|95928775|ref|ZP_01311521.1| shikimate 5-dehydrogenase [Desulfuromonas acetoxidans DSM 684]
gi|95135120|gb|EAT16773.1| shikimate 5-dehydrogenase [Desulfuromonas acetoxidans DSM 684]
Length = 280
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ +TK++G++ PV HS P++ N F + + +YVP V +DL+ + +
Sbjct: 3 VSGETKIYGILGDPVQHSLSPVMQNAAFTALGLDAVYVPFHVVPNDLEDAVAGLKALQVQ 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE V F D + A I AVNT++R S+ +GYNTD + D++K
Sbjct: 63 GVNVTVPHKEMVCAFMDRLDDEAALIGAVNTVVREGSE--FVGYNTDG----LGLVDSLK 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR 393
A + + ++ GAGGA R+ +G R
Sbjct: 117 --------ADLNIDVCQKNVMVLGAGGAARSAIVALARQGVR 150
>gi|52081116|ref|YP_079907.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644927|ref|ZP_07999160.1| shikimate dehydrogenase [Bacillus sp. BT1B_CT2]
gi|404489997|ref|YP_006714103.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683093|ref|ZP_17657932.1| shikimate 5-dehydrogenase [Bacillus licheniformis WX-02]
gi|81690974|sp|Q65H34.1|AROE_BACLD RecName: Full=Shikimate dehydrogenase
gi|52004327|gb|AAU24269.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348996|gb|AAU41630.1| shikimate dehydrogenase AroD [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392736|gb|EFV73530.1| shikimate dehydrogenase [Bacillus sp. BT1B_CT2]
gi|383439867|gb|EID47642.1| shikimate 5-dehydrogenase [Bacillus licheniformis WX-02]
Length = 278
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 297
++GLI PV HS P +HN + ++ G Y V+ DL+ + GF+V
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLEGHYHAFRVENEDLEDAVKGMRALGIQGFNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K ++MK D + A+A+ AVNT +RR +G L+GYNTD + +++
Sbjct: 64 PHKVSIMKHLDRIDESAEALGAVNT-VRREKEG-LVGYNTDGAGFLKSLK---------- 111
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRAL 383
S PL+ +L GAGGA RA+
Sbjct: 112 --PSLDRPLSELSILLIGAGGAARAI 135
>gi|153865781|ref|ZP_01997917.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase [Beggiatoa
sp. SS]
gi|152145103|gb|EDN72083.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Beggiatoa sp. SS]
Length = 311
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 139/322 (43%), Gaps = 24/322 (7%)
Query: 40 VEIRLDCINNFQPGKDLEIILTKKPLPVLIVY--RPKWAGGLYEGDEHKRLEALHLAEDL 97
+E+R D DL+I + ++Y R + GG +EG +RL+ L+ A
Sbjct: 1 MEVRADLTG------DLDIAWLRNRFQGRLLYALRSRQEGGHFEGTRQQRLQHLYRA--- 51
Query: 98 GADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADII 157
DY EL+ A +IL + + R I S + +SR++A ++
Sbjct: 52 AQDYDLIELEGARDILPELLNKLPPERRLISSYGSAKDFQQLHTQFEQLSRVEARFYKLL 111
Query: 158 KLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-KGTPV 216
+D + ++L V IA++ G RG ++LL P +++G++ +
Sbjct: 112 PTAVRADDGLAPLLLLKILGRRDV--IAFADGLRGFWTRLLMPHLGAPMIFGTVTEELNN 169
Query: 217 LGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD 276
++ L + Y + ++ ++FG++ + +S P LHN +R ++ +Y+P D
Sbjct: 170 QNTVSISRLIEDYGLPALSPVKELFGIVGNSIYYSLSPRLHNAAYRTLDKPALYIPFHTD 229
Query: 277 DLKKFFSTYSSPD--------FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPS 328
F+ + G ++ P+KE ++ + + P+ Q + A N IIR +
Sbjct: 230 HFTDFYDKIVRNNALEKLGFSLQGLTITSPHKEVAIENVNRISPMVQKVNATNLIIR--T 287
Query: 329 DGKLIGYNTDCEASITAIEDAI 350
+ + + TD E A+ I
Sbjct: 288 ENGWMAHTTDHEGIYGALRQKI 309
>gi|223040247|ref|ZP_03610525.1| shikimate 5-dehydrogenase [Campylobacter rectus RM3267]
gi|222878500|gb|EEF13603.1| shikimate 5-dehydrogenase [Campylobacter rectus RM3267]
Length = 267
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYN--GIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
K+F + P+ HS P LHN ++ + +Y + D + S + +G +V
Sbjct: 2 KIFAVFGNPISHSVSPRLHNLALGELDLSREALYTRYELSDGSRLISKFKELKLSGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KEA + CD A I +VNT++ R GK+ GYNTD + AI
Sbjct: 62 VPHKEAALAQCDVADETAAKIGSVNTLVSR--SGKIYGYNTDAPGFLRAI---------- 109
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD 398
G S L + GAGG RA+A+ KSRG RV + +
Sbjct: 110 GGFGQINSAL------VLGAGGTARAVAYALKSRGVRVCVLN 145
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,379,347,929
Number of Sequences: 23463169
Number of extensions: 279155803
Number of successful extensions: 783009
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1871
Number of HSP's successfully gapped in prelim test: 5058
Number of HSP's that attempted gapping in prelim test: 770759
Number of HSP's gapped (non-prelim): 7218
length of query: 403
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 258
effective length of database: 8,957,035,862
effective search space: 2310915252396
effective search space used: 2310915252396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)