Query 015614
Match_columns 403
No_of_seqs 245 out of 1708
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 15:40:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015614.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015614hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o7s_A DHQ-SDH PR, bifunctiona 100.0 5.7E-97 2E-101 773.1 38.7 395 8-402 2-398 (523)
2 4h3d_A 3-dehydroquinate dehydr 100.0 7.6E-58 2.6E-62 436.1 22.1 231 5-235 14-256 (258)
3 2yr1_A 3-dehydroquinate dehydr 100.0 3.5E-57 1.2E-61 431.3 25.7 228 5-233 14-253 (257)
4 3o1n_A 3-dehydroquinate dehydr 100.0 1.7E-57 5.8E-62 437.1 22.8 229 5-233 34-274 (276)
5 1sfl_A 3-dehydroquinate dehydr 100.0 7E-57 2.4E-61 425.0 21.4 222 10-231 3-237 (238)
6 3l9c_A 3-dehydroquinate dehydr 100.0 2.3E-55 8E-60 417.8 15.3 222 5-233 29-257 (259)
7 2ocz_A 3-dehydroquinate dehydr 100.0 3E-55 1E-59 411.9 14.9 219 9-235 2-228 (231)
8 2egz_A 3-dehydroquinate dehydr 100.0 4E-53 1.4E-57 394.5 21.6 212 12-233 2-217 (219)
9 2ox1_A 3-dehydroquinate dehydr 100.0 3.8E-51 1.3E-55 374.5 16.3 193 14-232 2-195 (196)
10 3tum_A Shikimate dehydrogenase 100.0 2.5E-48 8.7E-53 372.6 15.0 156 234-403 2-161 (269)
11 3t4e_A Quinate/shikimate dehyd 100.0 1E-45 3.4E-50 361.4 15.6 154 232-400 25-181 (312)
12 3o8q_A Shikimate 5-dehydrogena 100.0 4.5E-45 1.5E-49 352.5 15.6 154 235-402 5-161 (281)
13 3phh_A Shikimate dehydrogenase 100.0 1.9E-45 6.7E-50 352.0 12.4 148 237-403 2-153 (269)
14 3fbt_A Chorismate mutase and s 100.0 3.2E-45 1.1E-49 353.1 13.8 153 235-402 2-157 (282)
15 3jyo_A Quinate/shikimate dehyd 100.0 4.8E-45 1.6E-49 352.8 14.7 152 237-402 3-162 (283)
16 3pwz_A Shikimate dehydrogenase 100.0 7.2E-45 2.5E-49 349.5 14.4 149 239-402 3-155 (272)
17 3don_A Shikimate dehydrogenase 100.0 4.8E-45 1.6E-49 351.4 13.0 149 240-403 2-153 (277)
18 3tnl_A Shikimate dehydrogenase 100.0 1.7E-44 5.9E-49 353.1 14.3 152 234-400 33-187 (315)
19 1p77_A Shikimate 5-dehydrogena 100.0 1.4E-42 4.8E-47 333.8 14.1 150 239-402 2-153 (272)
20 1npy_A Hypothetical shikimate 100.0 8.2E-43 2.8E-47 335.1 12.4 151 234-402 2-154 (271)
21 3u62_A Shikimate dehydrogenase 100.0 1.9E-42 6.6E-47 329.4 9.8 139 240-402 2-143 (253)
22 1nyt_A Shikimate 5-dehydrogena 100.0 2E-41 7E-46 325.5 14.3 150 239-402 2-153 (271)
23 2egg_A AROE, shikimate 5-dehyd 100.0 2.8E-40 9.5E-45 321.7 14.4 161 228-402 13-176 (297)
24 1nvt_A Shikimate 5'-dehydrogen 100.0 8.9E-39 3E-43 309.5 13.0 153 234-402 7-161 (287)
25 2hk9_A Shikimate dehydrogenase 100.0 1.3E-37 4.6E-42 299.5 12.7 155 233-402 7-163 (275)
26 2d5c_A AROE, shikimate 5-dehyd 100.0 3.9E-34 1.3E-38 273.3 13.5 148 238-402 1-150 (263)
27 1lu9_A Methylene tetrahydromet 99.9 4.3E-26 1.5E-30 220.1 -0.3 141 246-402 2-154 (287)
28 2dvm_A Malic enzyme, 439AA lon 99.9 2.6E-25 9E-30 225.4 4.1 139 234-400 69-225 (439)
29 1pjc_A Protein (L-alanine dehy 99.4 1.2E-15 4E-20 151.9 -5.9 126 248-402 70-201 (361)
30 3l07_A Bifunctional protein fo 98.7 1.1E-08 3.9E-13 97.6 4.9 141 243-400 41-194 (285)
31 3p2o_A Bifunctional protein fo 98.6 2.3E-08 7.7E-13 95.5 5.5 142 242-400 39-193 (285)
32 4a5o_A Bifunctional protein fo 98.6 2.9E-08 1E-12 94.7 5.5 142 242-400 41-194 (286)
33 4a26_A Putative C-1-tetrahydro 98.6 5.9E-08 2E-12 93.3 6.2 142 242-399 43-197 (300)
34 3vh1_A Ubiquitin-like modifier 97.8 1E-05 3.6E-10 84.4 4.5 65 328-400 280-360 (598)
35 1x7d_A Ornithine cyclodeaminas 97.1 9.1E-05 3.1E-09 72.9 0.6 59 329-402 105-165 (350)
36 2v82_A 2-dehydro-3-deoxy-6-pho 97.0 0.0073 2.5E-07 54.5 12.8 122 10-159 6-127 (212)
37 1omo_A Alanine dehydrogenase; 97.0 0.00015 5.2E-09 70.5 0.9 59 329-402 101-161 (322)
38 1tt5_B Ubiquitin-activating en 96.9 7.9E-05 2.7E-09 75.5 -1.8 68 313-400 5-73 (434)
39 2i99_A MU-crystallin homolog; 96.9 0.00016 5.6E-09 69.9 0.2 59 329-402 111-171 (312)
40 3ngx_A Bifunctional protein fo 96.5 0.0038 1.3E-07 59.1 6.9 130 243-400 34-183 (276)
41 3q58_A N-acetylmannosamine-6-p 96.5 0.082 2.8E-06 48.6 15.5 117 22-159 35-155 (229)
42 3oj0_A Glutr, glutamyl-tRNA re 96.3 0.00086 2.9E-08 56.8 0.6 35 368-402 21-55 (144)
43 3ic5_A Putative saccharopine d 96.2 0.0022 7.5E-08 51.3 3.0 35 368-402 5-40 (118)
44 1vhc_A Putative KHG/KDPG aldol 96.2 0.11 3.8E-06 47.5 14.5 118 13-159 19-136 (224)
45 2yw3_A 4-hydroxy-2-oxoglutarat 96.1 0.1 3.5E-06 47.1 13.9 117 12-159 14-130 (207)
46 1h1y_A D-ribulose-5-phosphate 96.1 0.078 2.7E-06 48.4 13.2 113 8-131 4-121 (228)
47 1gpj_A Glutamyl-tRNA reductase 96.1 0.0025 8.5E-08 63.8 3.1 37 366-402 165-202 (404)
48 1wbh_A KHG/KDPG aldolase; lyas 96.1 0.15 5.2E-06 46.2 14.9 119 12-159 17-135 (214)
49 3igs_A N-acetylmannosamine-6-p 96.1 0.16 5.6E-06 46.6 15.3 117 22-159 35-155 (232)
50 1wa3_A 2-keto-3-deoxy-6-phosph 96.0 0.094 3.2E-06 46.7 13.0 118 12-160 11-131 (205)
51 3ajx_A 3-hexulose-6-phosphate 96.0 0.054 1.9E-06 48.3 11.3 131 12-160 2-134 (207)
52 3jr2_A Hexulose-6-phosphate sy 95.9 0.086 2.9E-06 47.8 12.1 131 10-159 6-138 (218)
53 2rir_A Dipicolinate synthase, 95.8 0.006 2.1E-07 58.2 4.1 38 364-401 153-190 (300)
54 2g1u_A Hypothetical protein TM 95.8 0.0099 3.4E-07 50.7 5.1 37 366-402 17-53 (155)
55 3d4o_A Dipicolinate synthase s 95.8 0.0064 2.2E-07 57.9 4.2 37 365-401 152-188 (293)
56 1y0e_A Putative N-acetylmannos 95.6 0.81 2.8E-05 41.0 17.6 118 21-160 21-146 (223)
57 1jw9_B Molybdopterin biosynthe 95.6 0.0071 2.4E-07 56.3 3.8 35 367-401 30-65 (249)
58 3f4w_A Putative hexulose 6 pho 95.6 0.073 2.5E-06 47.6 10.4 130 12-160 2-134 (211)
59 1zud_1 Adenylyltransferase THI 95.5 0.012 3.9E-07 55.0 5.0 34 367-400 27-61 (251)
60 3rui_A Ubiquitin-like modifier 95.5 0.013 4.3E-07 57.3 5.2 35 366-400 32-67 (340)
61 3ond_A Adenosylhomocysteinase; 95.5 0.015 5E-07 59.5 5.7 38 364-401 261-298 (488)
62 1edz_A 5,10-methylenetetrahydr 95.3 0.023 7.9E-07 55.0 6.3 136 258-400 58-210 (320)
63 1yxy_A Putative N-acetylmannos 95.2 0.27 9.3E-06 44.6 13.1 112 24-157 37-157 (234)
64 1tqj_A Ribulose-phosphate 3-ep 95.2 0.27 9.3E-06 44.9 13.0 109 12-131 6-120 (230)
65 1l7d_A Nicotinamide nucleotide 95.2 0.02 6.9E-07 56.6 5.7 38 366-403 170-207 (384)
66 3iwp_A Copper homeostasis prot 95.2 0.34 1.2E-05 45.9 13.7 149 15-175 42-201 (287)
67 1mxs_A KDPG aldolase; 2-keto-3 95.2 0.19 6.6E-06 45.9 11.8 118 13-159 28-145 (225)
68 1twd_A Copper homeostasis prot 95.1 0.75 2.6E-05 42.8 15.6 146 17-176 6-164 (256)
69 3h8v_A Ubiquitin-like modifier 94.8 0.017 5.7E-07 55.3 3.8 35 366-400 34-69 (292)
70 2vhw_A Alanine dehydrogenase; 94.7 0.018 6.2E-07 56.9 3.8 37 366-402 166-202 (377)
71 2eez_A Alanine dehydrogenase; 94.6 0.018 6.3E-07 56.6 3.7 37 366-402 164-200 (369)
72 2bdq_A Copper homeostasis prot 94.6 0.65 2.2E-05 42.4 13.6 138 31-176 16-171 (224)
73 1leh_A Leucine dehydrogenase; 94.6 0.044 1.5E-06 53.9 6.3 56 339-402 151-207 (364)
74 1x13_A NAD(P) transhydrogenase 94.6 0.025 8.4E-07 56.5 4.4 37 366-402 170-206 (401)
75 3h5n_A MCCB protein; ubiquitin 94.5 0.029 1E-06 55.0 4.6 33 368-400 118-151 (353)
76 3b0p_A TRNA-dihydrouridine syn 94.5 1 3.4E-05 43.9 15.7 93 12-107 59-166 (350)
77 4fgs_A Probable dehydrogenase 94.4 0.026 8.7E-07 53.4 3.8 38 365-402 26-64 (273)
78 4imr_A 3-oxoacyl-(acyl-carrier 94.3 0.041 1.4E-06 51.5 5.2 39 365-403 30-69 (275)
79 3r1i_A Short-chain type dehydr 94.1 0.049 1.7E-06 51.0 5.2 38 365-402 29-67 (276)
80 3gvp_A Adenosylhomocysteinase 94.1 0.078 2.7E-06 53.2 6.9 38 364-401 216-253 (435)
81 4e38_A Keto-hydroxyglutarate-a 94.1 0.97 3.3E-05 41.5 13.7 119 12-159 35-153 (232)
82 2nx9_A Oxaloacetate decarboxyl 94.0 3 0.0001 42.1 18.5 203 29-231 36-255 (464)
83 4gsl_A Ubiquitin-like modifier 94.0 0.048 1.6E-06 57.1 5.2 35 366-400 324-359 (615)
84 1rpx_A Protein (ribulose-phosp 93.9 1.2 4.2E-05 40.1 14.1 106 12-131 12-126 (230)
85 3dfz_A SIRC, precorrin-2 dehyd 93.9 0.053 1.8E-06 49.7 4.7 38 364-401 27-64 (223)
86 1c1d_A L-phenylalanine dehydro 93.8 0.15 5E-06 50.1 8.0 54 338-400 153-207 (355)
87 3gem_A Short chain dehydrogena 93.8 0.041 1.4E-06 51.1 3.9 39 364-402 23-62 (260)
88 3c85_A Putative glutathione-re 93.7 0.03 1E-06 48.9 2.7 37 366-402 37-74 (183)
89 1b0a_A Protein (fold bifunctio 93.7 0.12 4.1E-06 49.1 7.0 122 258-401 55-193 (288)
90 3uxy_A Short-chain dehydrogena 93.6 0.053 1.8E-06 50.5 4.4 38 365-402 25-63 (266)
91 3rih_A Short chain dehydrogena 93.6 0.051 1.7E-06 51.5 4.3 39 364-402 37-76 (293)
92 3kvo_A Hydroxysteroid dehydrog 93.6 0.083 2.8E-06 51.4 5.9 39 364-402 41-80 (346)
93 1a4i_A Methylenetetrahydrofola 93.5 0.12 4E-06 49.5 6.7 124 259-400 58-198 (301)
94 3n58_A Adenosylhomocysteinase; 93.5 0.12 4E-06 52.3 6.9 38 364-401 243-280 (464)
95 3un1_A Probable oxidoreductase 93.5 0.078 2.7E-06 49.1 5.3 37 366-402 26-63 (260)
96 2vns_A Metalloreductase steap3 93.5 0.039 1.3E-06 49.8 3.1 36 367-402 27-62 (215)
97 3ppi_A 3-hydroxyacyl-COA dehyd 93.4 0.037 1.3E-06 51.6 2.9 37 365-401 27-64 (281)
98 3p2y_A Alanine dehydrogenase/p 93.4 0.053 1.8E-06 53.7 4.1 37 366-402 182-218 (381)
99 3rkr_A Short chain oxidoreduct 93.3 0.045 1.5E-06 50.6 3.3 37 365-401 26-63 (262)
100 4dll_A 2-hydroxy-3-oxopropiona 93.3 0.048 1.7E-06 52.4 3.6 36 367-402 30-65 (320)
101 2c2x_A Methylenetetrahydrofola 93.3 0.12 4E-06 49.0 6.1 122 258-401 54-194 (281)
102 1vl6_A Malate oxidoreductase; 93.2 0.15 5.2E-06 50.4 7.1 36 365-400 189-225 (388)
103 3k31_A Enoyl-(acyl-carrier-pro 93.2 0.096 3.3E-06 49.5 5.5 38 364-401 26-66 (296)
104 2cuk_A Glycerate dehydrogenase 93.2 0.11 3.8E-06 49.9 6.0 39 364-402 140-178 (311)
105 2dbq_A Glyoxylate reductase; D 93.1 0.099 3.4E-06 50.7 5.6 39 364-402 146-184 (334)
106 3inp_A D-ribulose-phosphate 3- 93.1 1.9 6.5E-05 39.9 14.1 111 10-131 27-142 (246)
107 3ijr_A Oxidoreductase, short c 93.1 0.098 3.4E-06 49.3 5.4 37 365-401 44-81 (291)
108 3tjr_A Short chain dehydrogena 93.1 0.06 2.1E-06 51.0 3.9 37 365-401 28-65 (301)
109 2b4q_A Rhamnolipids biosynthes 93.1 0.06 2E-06 50.4 3.8 37 365-401 26-63 (276)
110 3gvc_A Oxidoreductase, probabl 93.0 0.046 1.6E-06 51.3 2.9 37 365-401 26-63 (277)
111 3tr9_A Dihydropteroate synthas 92.9 1.9 6.4E-05 41.4 14.0 146 19-183 45-231 (314)
112 4dry_A 3-oxoacyl-[acyl-carrier 92.9 0.042 1.4E-06 51.6 2.5 37 365-401 30-67 (281)
113 1nvm_A HOA, 4-hydroxy-2-oxoval 92.9 5.5 0.00019 38.4 17.7 195 21-231 28-248 (345)
114 1xi3_A Thiamine phosphate pyro 92.9 0.94 3.2E-05 40.1 11.4 105 24-160 27-135 (215)
115 3ba1_A HPPR, hydroxyphenylpyru 92.9 0.12 4E-06 50.2 5.6 39 364-402 160-198 (333)
116 3grp_A 3-oxoacyl-(acyl carrier 92.8 0.058 2E-06 50.2 3.3 38 364-401 23-61 (266)
117 3ctm_A Carbonyl reductase; alc 92.8 0.084 2.9E-06 49.0 4.4 38 365-402 31-69 (279)
118 4fc7_A Peroxisomal 2,4-dienoyl 92.8 0.12 3.9E-06 48.3 5.4 38 364-401 23-61 (277)
119 2ekl_A D-3-phosphoglycerate de 92.8 0.12 4.1E-06 49.6 5.6 39 364-402 138-176 (313)
120 4ibo_A Gluconate dehydrogenase 92.8 0.043 1.5E-06 51.3 2.3 38 364-401 22-60 (271)
121 1ub3_A Aldolase protein; schif 92.7 2.6 8.9E-05 38.2 14.2 140 20-176 16-173 (220)
122 3evt_A Phosphoglycerate dehydr 92.7 0.16 5.5E-06 49.1 6.4 39 364-402 133-171 (324)
123 1tqx_A D-ribulose-5-phosphate 92.7 0.87 3E-05 41.6 11.0 68 7-74 2-74 (227)
124 1xu9_A Corticosteroid 11-beta- 92.7 0.051 1.7E-06 50.9 2.7 37 365-401 25-62 (286)
125 4dqx_A Probable oxidoreductase 92.6 0.14 4.9E-06 47.8 5.7 38 364-401 23-61 (277)
126 2gcg_A Glyoxylate reductase/hy 92.6 0.12 4E-06 50.0 5.2 39 364-402 151-189 (330)
127 3ctl_A D-allulose-6-phosphate 92.6 1.4 4.7E-05 40.4 12.2 108 12-131 2-114 (231)
128 3noy_A 4-hydroxy-3-methylbut-2 92.5 1.7 5.8E-05 42.3 13.1 158 20-194 43-217 (366)
129 3o63_A Probable thiamine-phosp 92.5 2 6.9E-05 39.6 13.3 107 23-160 43-162 (243)
130 3v8b_A Putative dehydrogenase, 92.5 0.081 2.8E-06 49.7 3.8 37 365-401 25-62 (283)
131 3uf0_A Short-chain dehydrogena 92.5 0.17 5.7E-06 47.2 6.0 38 364-401 27-65 (273)
132 1xdw_A NAD+-dependent (R)-2-hy 92.4 0.13 4.4E-06 49.9 5.3 39 364-402 142-180 (331)
133 1pqw_A Polyketide synthase; ro 92.4 0.048 1.6E-06 48.0 2.1 35 367-401 38-73 (198)
134 1xhl_A Short-chain dehydrogena 92.4 0.061 2.1E-06 50.9 2.9 37 365-401 23-60 (297)
135 1wwk_A Phosphoglycerate dehydr 92.4 0.14 4.6E-06 49.1 5.3 39 364-402 138-176 (307)
136 1yx1_A Hypothetical protein PA 92.3 1 3.4E-05 41.2 11.2 131 29-163 29-164 (264)
137 2tps_A Protein (thiamin phosph 92.3 2.2 7.6E-05 38.0 13.3 104 25-159 33-142 (227)
138 1xg5_A ARPG836; short chain de 92.3 0.14 4.8E-06 47.5 5.3 36 366-401 30-66 (279)
139 1y8q_A Ubiquitin-like 1 activa 92.3 0.1 3.5E-06 50.9 4.5 33 367-399 35-68 (346)
140 1rd5_A Tryptophan synthase alp 92.3 3.9 0.00013 37.6 15.2 86 9-104 16-124 (262)
141 1w6u_A 2,4-dienoyl-COA reducta 92.3 0.18 6.2E-06 47.2 6.0 38 364-401 22-60 (302)
142 4dio_A NAD(P) transhydrogenase 92.3 0.13 4.3E-06 51.4 5.0 37 366-402 188-224 (405)
143 4dgs_A Dehydrogenase; structur 92.3 0.18 6.1E-06 49.1 6.1 39 364-402 167-205 (340)
144 2a9f_A Putative malic enzyme ( 92.2 0.45 1.6E-05 47.1 8.9 112 264-400 103-221 (398)
145 1yb1_A 17-beta-hydroxysteroid 92.2 0.17 5.9E-06 46.8 5.7 38 364-401 27-65 (272)
146 2d0i_A Dehydrogenase; structur 92.2 0.11 3.8E-06 50.3 4.5 38 365-402 143-180 (333)
147 1jub_A Dihydroorotate dehydrog 92.1 0.37 1.3E-05 45.8 8.0 86 13-105 96-192 (311)
148 2w2k_A D-mandelate dehydrogena 92.1 0.19 6.6E-06 49.0 6.1 39 364-402 159-198 (348)
149 3lmz_A Putative sugar isomeras 92.1 2.6 8.8E-05 38.2 13.6 126 11-147 18-152 (257)
150 4dyv_A Short-chain dehydrogena 92.1 0.066 2.3E-06 50.0 2.6 37 365-401 25-62 (272)
151 3gvx_A Glycerate dehydrogenase 92.0 0.17 5.7E-06 48.2 5.3 38 365-402 119-156 (290)
152 3cxt_A Dehydrogenase with diff 91.9 0.19 6.6E-06 47.3 5.7 37 365-401 31-68 (291)
153 3nav_A Tryptophan synthase alp 91.9 4.8 0.00016 37.7 15.3 85 14-104 25-131 (271)
154 3ftp_A 3-oxoacyl-[acyl-carrier 91.9 0.14 4.9E-06 47.6 4.8 38 364-401 24-62 (270)
155 3ce6_A Adenosylhomocysteinase; 91.8 0.11 3.7E-06 53.3 4.1 38 365-402 271-308 (494)
156 3t7c_A Carveol dehydrogenase; 91.8 0.2 6.7E-06 47.3 5.7 37 364-400 24-61 (299)
157 1w8s_A FBP aldolase, fructose- 91.8 2.7 9.3E-05 39.1 13.5 127 27-159 96-230 (263)
158 2hcy_A Alcohol dehydrogenase 1 91.8 0.16 5.5E-06 49.0 5.1 36 367-402 169-205 (347)
159 4iin_A 3-ketoacyl-acyl carrier 91.8 0.13 4.5E-06 47.7 4.3 37 364-400 25-62 (271)
160 3pp8_A Glyoxylate/hydroxypyruv 91.8 0.21 7.2E-06 48.1 5.9 39 364-402 135-173 (315)
161 1dxy_A D-2-hydroxyisocaproate 91.7 0.17 5.9E-06 49.0 5.2 39 364-402 141-179 (333)
162 3two_A Mannitol dehydrogenase; 91.6 0.2 6.9E-06 48.3 5.7 37 367-403 176-212 (348)
163 1mx3_A CTBP1, C-terminal bindi 91.6 0.21 7.1E-06 48.8 5.7 38 365-402 165-202 (347)
164 3h9u_A Adenosylhomocysteinase; 91.6 0.35 1.2E-05 48.6 7.4 38 364-401 207-244 (436)
165 2cdc_A Glucose dehydrogenase g 91.6 0.12 4.2E-06 50.3 4.0 35 367-401 180-214 (366)
166 1j4a_A D-LDH, D-lactate dehydr 91.6 0.13 4.6E-06 49.7 4.3 39 364-402 142-180 (333)
167 2xdo_A TETX2 protein; tetracyc 91.5 0.19 6.6E-06 49.1 5.5 34 368-401 26-59 (398)
168 1g0o_A Trihydroxynaphthalene r 91.5 0.17 6E-06 47.1 4.9 38 364-401 25-63 (283)
169 3v2h_A D-beta-hydroxybutyrate 91.5 0.22 7.4E-06 46.6 5.6 36 365-400 22-58 (281)
170 2fli_A Ribulose-phosphate 3-ep 91.5 2.4 8.1E-05 37.7 12.3 106 12-131 5-117 (220)
171 1gdh_A D-glycerate dehydrogena 91.4 0.19 6.4E-06 48.5 5.1 39 364-402 142-181 (320)
172 3aoe_E Glutamate dehydrogenase 91.4 0.48 1.6E-05 47.4 8.1 53 338-399 197-250 (419)
173 3ceu_A Thiamine phosphate pyro 91.4 0.48 1.7E-05 42.5 7.5 122 27-187 17-151 (210)
174 3r3s_A Oxidoreductase; structu 91.3 0.21 7.3E-06 47.0 5.4 36 365-400 46-82 (294)
175 1qp8_A Formate dehydrogenase; 91.3 0.26 8.8E-06 47.1 5.9 38 365-402 121-158 (303)
176 3hg7_A D-isomer specific 2-hyd 91.2 0.29 9.9E-06 47.3 6.3 39 364-402 136-174 (324)
177 3v2g_A 3-oxoacyl-[acyl-carrier 91.1 0.28 9.6E-06 45.6 5.9 37 364-400 27-64 (271)
178 2iid_A L-amino-acid oxidase; f 91.0 0.26 9E-06 49.6 6.0 33 368-400 33-65 (498)
179 2vdc_G Glutamate synthase [NAD 91.0 0.16 5.6E-06 51.2 4.4 35 367-401 121-155 (456)
180 1yqd_A Sinapyl alcohol dehydro 91.0 0.2 6.8E-06 48.8 4.9 36 367-402 187-222 (366)
181 1v3u_A Leukotriene B4 12- hydr 90.9 0.14 4.8E-06 49.0 3.7 35 367-401 145-180 (333)
182 1w8s_A FBP aldolase, fructose- 90.9 2 6.8E-05 40.0 11.5 151 21-187 39-203 (263)
183 3ovp_A Ribulose-phosphate 3-ep 90.9 2.6 8.7E-05 38.4 12.0 112 9-131 3-120 (228)
184 4e5n_A Thermostable phosphite 90.9 0.22 7.5E-06 48.2 5.0 38 364-401 141-178 (330)
185 3grk_A Enoyl-(acyl-carrier-pro 90.9 0.28 9.5E-06 46.2 5.6 36 365-400 28-66 (293)
186 1iz0_A Quinone oxidoreductase; 90.8 0.17 5.9E-06 47.7 4.1 36 367-402 125-161 (302)
187 3m47_A Orotidine 5'-phosphate 90.8 3.6 0.00012 37.4 12.9 158 6-175 9-170 (228)
188 4dmm_A 3-oxoacyl-[acyl-carrier 90.7 0.23 7.7E-06 46.2 4.8 37 364-400 24-61 (269)
189 1piw_A Hypothetical zinc-type 90.7 0.24 8.3E-06 48.0 5.1 37 367-403 179-215 (360)
190 3hdj_A Probable ornithine cycl 90.6 0.27 9.1E-06 47.3 5.3 34 367-400 120-155 (313)
191 3vnd_A TSA, tryptophan synthas 90.6 7.4 0.00025 36.3 15.1 90 9-104 16-129 (267)
192 2g76_A 3-PGDH, D-3-phosphoglyc 90.5 0.25 8.5E-06 48.0 5.0 39 364-402 161-199 (335)
193 3qlj_A Short chain dehydrogena 90.5 0.22 7.4E-06 47.5 4.6 36 365-400 24-60 (322)
194 1h5y_A HISF; histidine biosynt 90.5 1.3 4.4E-05 40.0 9.7 125 24-161 34-175 (253)
195 3oec_A Carveol dehydrogenase ( 90.5 0.24 8.3E-06 47.2 4.9 36 365-400 43-79 (317)
196 1rjw_A ADH-HT, alcohol dehydro 90.5 0.15 5E-06 49.1 3.3 36 367-402 164-199 (339)
197 4da9_A Short-chain dehydrogena 90.4 0.34 1.2E-05 45.2 5.8 35 365-399 26-61 (280)
198 1xm3_A Thiazole biosynthesis p 90.4 2.5 8.6E-05 39.3 11.7 127 9-157 12-151 (264)
199 2ftp_A Hydroxymethylglutaryl-C 90.4 7.5 0.00026 36.7 15.3 147 21-184 28-207 (302)
200 3ps9_A TRNA 5-methylaminomethy 90.3 0.29 9.8E-06 51.8 5.7 33 368-400 272-304 (676)
201 2qhx_A Pteridine reductase 1; 90.2 0.13 4.5E-06 49.4 2.8 36 366-401 44-81 (328)
202 4g2n_A D-isomer specific 2-hyd 90.2 0.36 1.2E-05 47.1 5.8 38 364-401 169-206 (345)
203 2c07_A 3-oxoacyl-(acyl-carrier 90.2 0.32 1.1E-05 45.3 5.4 38 364-401 40-78 (285)
204 2j6i_A Formate dehydrogenase; 90.0 0.32 1.1E-05 47.8 5.3 39 364-402 160-199 (364)
205 2bry_A NEDD9 interacting prote 90.0 0.33 1.1E-05 49.4 5.7 35 367-401 91-125 (497)
206 4b7c_A Probable oxidoreductase 89.9 0.15 5.2E-06 48.8 2.9 36 367-402 149-185 (336)
207 2c5a_A GDP-mannose-3', 5'-epim 89.9 0.48 1.6E-05 46.0 6.5 38 365-402 26-64 (379)
208 1yb5_A Quinone oxidoreductase; 89.9 0.2 6.8E-06 48.6 3.7 36 367-402 170-206 (351)
209 3d64_A Adenosylhomocysteinase; 89.8 0.35 1.2E-05 49.4 5.6 38 364-401 273-310 (494)
210 3aog_A Glutamate dehydrogenase 89.8 0.76 2.6E-05 46.2 7.9 54 338-400 214-268 (440)
211 3v76_A Flavoprotein; structura 89.7 0.28 9.7E-06 48.8 4.8 34 368-401 27-60 (417)
212 2b69_A UDP-glucuronate decarbo 89.7 0.39 1.3E-05 45.7 5.7 36 366-401 25-61 (343)
213 2uyy_A N-PAC protein; long-cha 89.7 0.24 8.1E-06 47.0 4.0 34 369-402 31-64 (316)
214 1uuf_A YAHK, zinc-type alcohol 89.7 0.3 1E-05 47.6 4.9 36 367-402 194-229 (369)
215 3jtm_A Formate dehydrogenase, 89.6 0.37 1.3E-05 47.1 5.5 38 364-401 160-197 (351)
216 1v8b_A Adenosylhomocysteinase; 89.6 0.32 1.1E-05 49.6 5.1 38 364-401 253-290 (479)
217 2j3h_A NADP-dependent oxidored 89.6 0.17 5.7E-06 48.6 2.9 36 367-402 155-191 (345)
218 4eye_A Probable oxidoreductase 89.6 0.24 8.4E-06 47.6 4.1 36 367-402 159-195 (342)
219 1n7h_A GDP-D-mannose-4,6-dehyd 89.5 0.38 1.3E-05 46.5 5.5 34 369-402 29-63 (381)
220 3s2e_A Zinc-containing alcohol 89.5 0.2 6.8E-06 48.1 3.4 36 367-402 166-201 (340)
221 2yq5_A D-isomer specific 2-hyd 89.5 0.3 1E-05 47.6 4.7 39 364-402 144-182 (343)
222 3oa3_A Aldolase; structural ge 89.5 11 0.00037 35.6 15.2 141 20-177 71-229 (288)
223 3gms_A Putative NADPH:quinone 89.5 0.27 9.4E-06 47.1 4.4 37 367-403 144-181 (340)
224 2cf5_A Atccad5, CAD, cinnamyl 89.4 0.28 9.6E-06 47.5 4.5 36 367-402 180-215 (357)
225 3pvc_A TRNA 5-methylaminomethy 89.4 0.27 9.4E-06 52.1 4.7 33 368-400 264-296 (689)
226 2pi1_A D-lactate dehydrogenase 89.4 0.33 1.1E-05 47.0 4.9 39 364-402 137-175 (334)
227 3ruf_A WBGU; rossmann fold, UD 89.4 0.45 1.5E-05 45.3 5.8 35 367-401 24-59 (351)
228 1sb8_A WBPP; epimerase, 4-epim 89.4 0.44 1.5E-05 45.4 5.8 36 366-401 25-61 (352)
229 2nac_A NAD-dependent formate d 89.3 0.41 1.4E-05 47.5 5.5 39 364-402 187-225 (393)
230 2d8a_A PH0655, probable L-thre 89.3 0.19 6.6E-06 48.4 3.1 36 367-402 167-203 (348)
231 1mzh_A Deoxyribose-phosphate a 89.2 4.8 0.00017 36.3 12.4 90 11-105 54-152 (225)
232 1e3j_A NADP(H)-dependent ketos 89.2 0.24 8E-06 47.9 3.7 35 367-401 168-202 (352)
233 3uog_A Alcohol dehydrogenase; 89.2 0.24 8.1E-06 48.2 3.7 36 367-402 189-224 (363)
234 3ggo_A Prephenate dehydrogenas 89.1 0.21 7.3E-06 47.8 3.3 35 368-402 33-69 (314)
235 1rp0_A ARA6, thiazole biosynth 88.9 0.38 1.3E-05 44.9 4.8 33 369-401 40-73 (284)
236 1e3i_A Alcohol dehydrogenase, 88.8 0.36 1.2E-05 47.0 4.7 37 367-403 195-232 (376)
237 2q1s_A Putative nucleotide sug 88.8 0.45 1.5E-05 46.1 5.4 37 366-402 30-68 (377)
238 2nv1_A Pyridoxal biosynthesis 88.8 2.6 8.9E-05 39.9 10.7 115 21-160 29-152 (305)
239 2jhf_A Alcohol dehydrogenase E 88.8 0.36 1.2E-05 46.9 4.7 37 367-403 191-228 (374)
240 4b4u_A Bifunctional protein fo 88.7 0.71 2.4E-05 44.0 6.5 122 258-399 75-211 (303)
241 2yci_X 5-methyltetrahydrofolat 88.7 4.9 0.00017 37.6 12.3 140 21-177 32-190 (271)
242 2dq4_A L-threonine 3-dehydroge 88.7 0.22 7.4E-06 47.9 3.0 36 367-402 164-200 (343)
243 1cdo_A Alcohol dehydrogenase; 88.6 0.38 1.3E-05 46.8 4.7 37 367-403 192-229 (374)
244 3ngj_A Deoxyribose-phosphate a 88.5 13 0.00045 34.0 14.8 142 20-175 40-196 (239)
245 3gg9_A D-3-phosphoglycerate de 88.5 0.43 1.5E-05 46.6 5.0 37 364-400 156-192 (352)
246 3u5t_A 3-oxoacyl-[acyl-carrier 88.5 0.44 1.5E-05 44.1 4.9 34 366-399 25-59 (267)
247 3nrc_A Enoyl-[acyl-carrier-pro 88.5 0.48 1.6E-05 44.0 5.2 37 365-401 23-62 (280)
248 3uko_A Alcohol dehydrogenase c 88.5 0.29 1E-05 47.7 3.8 37 367-403 193-230 (378)
249 2i0z_A NAD(FAD)-utilizing dehy 88.4 0.39 1.3E-05 48.0 4.8 33 369-401 27-59 (447)
250 1rqb_A Transcarboxylase 5S sub 88.4 14 0.00049 37.9 16.5 147 29-177 53-214 (539)
251 2e1m_A L-glutamate oxidase; L- 88.4 0.47 1.6E-05 46.7 5.3 34 367-400 43-76 (376)
252 2r0c_A REBC; flavin adenine di 88.4 0.41 1.4E-05 49.3 5.0 34 368-401 26-59 (549)
253 2x6t_A ADP-L-glycero-D-manno-h 88.2 0.41 1.4E-05 45.8 4.6 36 366-401 44-81 (357)
254 1f76_A Dihydroorotate dehydrog 88.2 3.3 0.00011 39.6 11.1 87 12-106 135-246 (336)
255 3qwb_A Probable quinone oxidor 88.1 0.24 8.3E-06 47.4 2.9 37 366-402 147-184 (334)
256 1p0f_A NADP-dependent alcohol 88.1 0.34 1.2E-05 47.1 4.0 37 367-403 191-228 (373)
257 1wly_A CAAR, 2-haloacrylate re 88.0 0.22 7.5E-06 47.7 2.5 35 367-401 145-180 (333)
258 1qor_A Quinone oxidoreductase; 88.0 0.2 6.8E-06 47.8 2.2 36 367-402 140-176 (327)
259 2g0w_A LMO2234 protein; putati 87.9 6.9 0.00023 36.2 13.0 78 20-104 36-124 (296)
260 2eih_A Alcohol dehydrogenase; 87.9 0.25 8.7E-06 47.4 2.9 36 367-402 166-202 (343)
261 3s8m_A Enoyl-ACP reductase; ro 87.9 0.5 1.7E-05 47.3 5.1 66 332-402 30-97 (422)
262 2j8z_A Quinone oxidoreductase; 87.8 0.25 8.7E-06 47.8 2.9 36 367-402 162-198 (354)
263 2e4g_A Tryptophan halogenase; 87.8 0.55 1.9E-05 48.3 5.6 33 368-400 25-60 (550)
264 3rku_A Oxidoreductase YMR226C; 87.8 0.21 7.3E-06 46.9 2.3 36 366-401 31-70 (287)
265 1pl8_A Human sorbitol dehydrog 87.8 0.33 1.1E-05 46.9 3.7 36 367-402 171-207 (356)
266 1vzw_A Phosphoribosyl isomeras 87.8 7.6 0.00026 35.0 12.8 146 21-186 33-196 (244)
267 1v9l_A Glutamate dehydrogenase 87.8 1 3.6E-05 44.9 7.4 52 339-399 190-242 (421)
268 1jvb_A NAD(H)-dependent alcoho 87.8 0.28 9.5E-06 47.3 3.1 36 367-402 170-207 (347)
269 3nl6_A Thiamine biosynthetic b 87.7 7 0.00024 40.2 13.8 145 23-198 25-191 (540)
270 3qja_A IGPS, indole-3-glycerol 87.7 3.1 0.00011 38.9 10.3 108 29-160 78-189 (272)
271 2fzw_A Alcohol dehydrogenase c 87.7 0.37 1.3E-05 46.8 4.0 37 367-403 190-227 (373)
272 3hgj_A Chromate reductase; TIM 87.7 4.8 0.00016 38.9 12.0 88 16-106 141-260 (349)
273 1o94_A Tmadh, trimethylamine d 87.7 0.53 1.8E-05 50.3 5.5 35 367-401 388-422 (729)
274 1gtm_A Glutamate dehydrogenase 87.6 1.4 4.8E-05 44.0 8.3 53 339-400 191-245 (419)
275 3c4n_A Uncharacterized protein 87.6 0.39 1.3E-05 47.1 4.2 32 369-400 37-70 (405)
276 3k30_A Histamine dehydrogenase 87.6 0.43 1.5E-05 50.6 4.7 35 367-401 390-424 (690)
277 1z41_A YQJM, probable NADH-dep 87.6 5.1 0.00017 38.5 12.1 80 24-106 145-250 (338)
278 4at0_A 3-ketosteroid-delta4-5a 87.6 0.44 1.5E-05 48.5 4.7 33 369-401 42-74 (510)
279 3m6i_A L-arabinitol 4-dehydrog 87.6 0.3 1E-05 47.3 3.3 36 367-402 179-215 (363)
280 2zb4_A Prostaglandin reductase 87.6 0.27 9.3E-06 47.5 2.9 35 367-401 158-196 (357)
281 2x8g_A Thioredoxin glutathione 87.5 0.96 3.3E-05 46.8 7.3 59 329-399 78-138 (598)
282 3e02_A Uncharacterized protein 87.5 20 0.00068 34.1 16.9 167 11-190 8-203 (311)
283 1y0p_A Fumarate reductase flav 87.4 0.46 1.6E-05 49.0 4.8 34 368-401 126-159 (571)
284 4e4t_A Phosphoribosylaminoimid 87.4 0.66 2.2E-05 46.2 5.7 36 366-401 33-68 (419)
285 3gk3_A Acetoacetyl-COA reducta 87.4 0.49 1.7E-05 43.6 4.5 37 364-400 21-58 (269)
286 1h2b_A Alcohol dehydrogenase; 87.4 0.3 1E-05 47.4 3.1 36 367-402 186-222 (359)
287 3jyn_A Quinone oxidoreductase; 87.4 0.23 7.8E-06 47.4 2.2 36 367-402 140-176 (325)
288 2w6r_A Imidazole glycerol phos 87.3 11 0.00036 34.4 13.7 149 21-186 31-206 (266)
289 4hy3_A Phosphoglycerate oxidor 87.3 0.6 2.1E-05 45.8 5.2 38 364-401 172-209 (365)
290 1kol_A Formaldehyde dehydrogen 87.2 0.37 1.3E-05 47.3 3.7 36 367-402 185-221 (398)
291 3fmw_A Oxygenase; mithramycin, 87.1 0.49 1.7E-05 49.1 4.7 33 369-401 50-82 (570)
292 1qo8_A Flavocytochrome C3 fuma 87.1 0.43 1.5E-05 49.3 4.3 33 369-401 122-154 (566)
293 3goh_A Alcohol dehydrogenase, 87.0 0.59 2E-05 44.2 4.9 36 367-403 142-177 (315)
294 3oix_A Putative dihydroorotate 87.0 8.6 0.00029 37.2 13.2 83 13-102 131-224 (345)
295 2o4c_A Erythronate-4-phosphate 86.9 0.78 2.7E-05 45.3 5.8 37 364-400 112-148 (380)
296 4ej6_A Putative zinc-binding d 86.9 0.38 1.3E-05 46.9 3.6 35 367-401 182-217 (370)
297 4a2c_A Galactitol-1-phosphate 86.8 0.4 1.4E-05 45.9 3.7 37 366-402 159-196 (346)
298 1mo9_A ORF3; nucleotide bindin 86.8 0.53 1.8E-05 48.1 4.8 34 368-401 43-76 (523)
299 3ics_A Coenzyme A-disulfide re 86.8 0.54 1.8E-05 48.6 4.8 35 367-401 35-71 (588)
300 1tx2_A DHPS, dihydropteroate s 86.8 21 0.00073 33.7 17.8 144 21-183 61-233 (297)
301 3k6j_A Protein F01G10.3, confi 86.7 0.43 1.5E-05 48.4 3.9 35 368-402 54-88 (460)
302 2h6e_A ADH-4, D-arabinose 1-de 86.6 0.32 1.1E-05 46.8 2.8 36 367-402 170-207 (344)
303 1zcj_A Peroxisomal bifunctiona 86.6 0.34 1.2E-05 49.0 3.1 35 368-402 37-71 (463)
304 2dph_A Formaldehyde dismutase; 86.6 0.34 1.2E-05 47.7 3.0 36 367-402 185-221 (398)
305 3urh_A Dihydrolipoyl dehydroge 86.5 0.62 2.1E-05 47.0 5.0 33 368-400 25-57 (491)
306 1aj0_A DHPS, dihydropteroate s 86.4 22 0.00074 33.4 16.9 144 21-183 36-214 (282)
307 3nlc_A Uncharacterized protein 86.3 0.45 1.6E-05 49.3 3.9 33 369-401 108-140 (549)
308 4dup_A Quinone oxidoreductase; 86.3 0.35 1.2E-05 46.8 2.9 36 367-402 167-203 (353)
309 4a5l_A Thioredoxin reductase; 86.3 0.63 2.2E-05 43.2 4.7 36 366-401 150-185 (314)
310 3zu3_A Putative reductase YPO4 86.3 0.7 2.4E-05 46.0 5.1 63 332-402 16-83 (405)
311 1sc6_A PGDH, D-3-phosphoglycer 86.2 1 3.4E-05 44.8 6.3 39 364-402 141-179 (404)
312 2nvu_B Maltose binding protein 86.2 0.56 1.9E-05 50.7 4.7 34 367-400 410-444 (805)
313 3ip1_A Alcohol dehydrogenase, 86.1 0.44 1.5E-05 47.0 3.6 37 366-402 212-249 (404)
314 4iiu_A 3-oxoacyl-[acyl-carrier 86.1 0.65 2.2E-05 42.7 4.5 36 365-400 23-60 (267)
315 3k96_A Glycerol-3-phosphate de 86.1 0.37 1.3E-05 47.1 2.9 35 368-402 29-63 (356)
316 2e6f_A Dihydroorotate dehydrog 86.0 1 3.5E-05 42.7 6.1 86 13-105 96-195 (314)
317 3glc_A Aldolase LSRF; TIM barr 86.0 5.2 0.00018 37.9 10.9 130 22-163 72-212 (295)
318 4gcm_A TRXR, thioredoxin reduc 86.0 0.65 2.2E-05 43.4 4.6 36 366-401 143-178 (312)
319 3khj_A Inosine-5-monophosphate 86.0 5 0.00017 39.1 11.1 120 9-160 45-173 (361)
320 2dqw_A Dihydropteroate synthas 85.9 11 0.00038 35.6 13.1 142 21-183 50-226 (294)
321 2tmg_A Protein (glutamate dehy 85.9 1.9 6.6E-05 42.9 8.1 53 339-400 189-243 (415)
322 2c0c_A Zinc binding alcohol de 85.9 0.33 1.1E-05 47.1 2.6 35 367-401 163-198 (362)
323 3fpc_A NADP-dependent alcohol 85.9 0.37 1.3E-05 46.4 2.9 36 367-402 166-202 (352)
324 1tt5_A APPBP1, amyloid protein 85.9 0.65 2.2E-05 47.9 4.8 34 367-400 31-65 (531)
325 4e3z_A Putative oxidoreductase 85.9 0.61 2.1E-05 43.0 4.3 35 366-400 24-60 (272)
326 3oet_A Erythronate-4-phosphate 85.8 0.96 3.3E-05 44.6 5.8 37 364-400 115-151 (381)
327 2q02_A Putative cytoplasmic pr 85.7 19 0.00066 32.2 14.9 76 21-104 20-104 (272)
328 2z6i_A Trans-2-enoyl-ACP reduc 85.7 12 0.00041 35.6 13.6 151 9-186 12-168 (332)
329 3o0h_A Glutathione reductase; 85.7 0.74 2.5E-05 46.4 5.1 33 368-400 26-58 (484)
330 2yfq_A Padgh, NAD-GDH, NAD-spe 85.7 0.9 3.1E-05 45.4 5.6 54 338-400 191-245 (421)
331 3oh8_A Nucleoside-diphosphate 85.6 0.96 3.3E-05 46.0 5.9 35 368-402 147-182 (516)
332 1f8f_A Benzyl alcohol dehydrog 85.5 0.41 1.4E-05 46.5 3.0 36 367-402 190-226 (371)
333 3gr7_A NADPH dehydrogenase; fl 85.5 5.4 0.00018 38.5 10.9 87 16-105 133-249 (340)
334 3fpz_A Thiazole biosynthetic e 85.5 0.59 2E-05 44.3 4.0 33 369-401 66-100 (326)
335 4eue_A Putative reductase CA_C 85.4 0.77 2.6E-05 45.9 5.0 37 366-402 58-97 (418)
336 3lab_A Putative KDPG (2-keto-3 85.3 16 0.00054 33.0 13.2 120 11-159 13-138 (217)
337 3k5p_A D-3-phosphoglycerate de 85.3 1.2 4.1E-05 44.5 6.2 38 364-401 152-189 (416)
338 1tt7_A YHFP; alcohol dehydroge 85.2 0.59 2E-05 44.5 3.9 34 370-403 153-187 (330)
339 1vj0_A Alcohol dehydrogenase, 85.1 0.51 1.7E-05 46.1 3.4 36 367-402 195-231 (380)
340 3cu2_A Ribulose-5-phosphate 3- 85.0 3.8 0.00013 37.5 9.2 105 12-131 15-134 (237)
341 4eez_A Alcohol dehydrogenase 1 84.9 0.58 2E-05 44.7 3.7 36 367-402 163-199 (348)
342 1xa0_A Putative NADPH dependen 84.8 0.62 2.1E-05 44.3 3.8 34 370-403 152-186 (328)
343 4a0s_A Octenoyl-COA reductase/ 84.8 0.43 1.5E-05 47.7 2.8 36 366-401 219-255 (447)
344 3r12_A Deoxyribose-phosphate a 84.8 25 0.00085 32.6 15.0 143 19-175 55-212 (260)
345 3vni_A Xylose isomerase domain 84.7 9.5 0.00032 34.9 12.0 80 21-103 18-106 (294)
346 2vvm_A Monoamine oxidase N; FA 84.7 0.82 2.8E-05 45.8 4.8 32 369-400 40-71 (495)
347 3ces_A MNMG, tRNA uridine 5-ca 84.6 0.82 2.8E-05 48.3 4.9 33 368-400 28-60 (651)
348 1eye_A DHPS 1, dihydropteroate 84.5 26 0.0009 32.7 15.5 156 21-197 27-219 (280)
349 3fbg_A Putative arginate lyase 84.5 0.59 2E-05 44.9 3.6 36 367-402 150-186 (346)
350 4g6h_A Rotenone-insensitive NA 84.5 0.61 2.1E-05 47.5 3.8 33 368-400 42-74 (502)
351 3exr_A RMPD (hexulose-6-phosph 84.4 8 0.00027 34.8 11.0 92 6-109 1-93 (221)
352 2z3y_A Lysine-specific histone 84.4 1 3.4E-05 47.5 5.6 34 367-400 106-139 (662)
353 3gwf_A Cyclohexanone monooxyge 84.4 1 3.4E-05 46.4 5.5 38 365-402 175-212 (540)
354 3e49_A Uncharacterized protein 84.4 29 0.00098 33.0 18.0 159 11-190 8-203 (311)
355 2y88_A Phosphoribosyl isomeras 84.4 7.6 0.00026 34.9 10.9 146 21-186 32-199 (244)
356 3hdq_A UDP-galactopyranose mut 84.3 0.93 3.2E-05 44.9 5.0 33 368-400 29-61 (397)
357 1ps9_A 2,4-dienoyl-COA reducta 84.3 0.98 3.4E-05 47.6 5.5 34 368-401 373-406 (671)
358 2dkh_A 3-hydroxybenzoate hydro 84.2 0.69 2.4E-05 48.6 4.2 33 369-401 33-66 (639)
359 2gmh_A Electron transfer flavo 84.2 0.68 2.3E-05 48.1 4.1 33 369-401 36-74 (584)
360 1ep3_A Dihydroorotate dehydrog 84.0 2.3 8E-05 39.9 7.5 84 12-104 100-195 (311)
361 1qop_A Tryptophan synthase alp 84.0 20 0.00067 33.1 13.8 88 9-102 15-126 (268)
362 3jsk_A Cypbp37 protein; octame 84.0 0.79 2.7E-05 44.6 4.2 33 369-401 80-114 (344)
363 1gte_A Dihydropyrimidine dehyd 83.9 0.8 2.7E-05 50.9 4.7 33 368-400 187-220 (1025)
364 4ap3_A Steroid monooxygenase; 83.8 1 3.4E-05 46.5 5.1 37 365-401 188-224 (549)
365 2pgw_A Muconate cycloisomerase 83.7 16 0.00056 35.4 13.7 157 16-192 142-304 (384)
366 3gaz_A Alcohol dehydrogenase s 83.7 0.64 2.2E-05 44.6 3.4 33 367-400 150-183 (343)
367 4f6c_A AUSA reductase domain p 83.6 0.7 2.4E-05 45.6 3.7 37 366-402 67-104 (427)
368 2zxi_A TRNA uridine 5-carboxym 83.6 0.91 3.1E-05 47.8 4.7 32 369-400 28-59 (637)
369 3nx4_A Putative oxidoreductase 83.4 0.72 2.5E-05 43.7 3.6 35 368-403 148-183 (324)
370 3tsm_A IGPS, indole-3-glycerol 83.4 29 0.00099 32.3 14.8 112 21-159 80-195 (272)
371 3u0b_A Oxidoreductase, short c 83.3 0.98 3.3E-05 45.5 4.7 36 365-400 210-246 (454)
372 1geq_A Tryptophan synthase alp 83.3 25 0.00086 31.5 18.6 91 8-105 2-115 (248)
373 2rgh_A Alpha-glycerophosphate 83.2 0.94 3.2E-05 46.9 4.7 32 369-400 33-64 (571)
374 2b5w_A Glucose dehydrogenase; 83.1 0.85 2.9E-05 44.0 4.0 35 368-402 173-210 (357)
375 2gjc_A Thiazole biosynthetic e 82.9 0.83 2.8E-05 44.1 3.8 33 369-401 66-100 (326)
376 4hb7_A Dihydropteroate synthas 82.9 18 0.0006 33.8 12.7 160 21-198 28-213 (270)
377 3uox_A Otemo; baeyer-villiger 82.9 1.2 4.1E-05 45.9 5.3 37 365-401 182-218 (545)
378 1ka9_F Imidazole glycerol phos 82.9 16 0.00055 32.8 12.5 150 21-186 32-202 (252)
379 3krt_A Crotonyl COA reductase; 82.8 0.58 2E-05 47.0 2.8 36 366-401 227-263 (456)
380 3glc_A Aldolase LSRF; TIM barr 82.7 32 0.0011 32.4 16.1 121 27-158 129-255 (295)
381 3cmm_A Ubiquitin-activating en 82.6 0.82 2.8E-05 50.8 4.1 35 366-400 25-60 (1015)
382 2qjg_A Putative aldolase MJ040 82.6 4.7 0.00016 37.2 8.8 149 22-186 44-208 (273)
383 3jv7_A ADH-A; dehydrogenase, n 82.6 0.67 2.3E-05 44.4 3.0 36 367-402 171-207 (345)
384 1ygy_A PGDH, D-3-phosphoglycer 82.5 1.4 4.8E-05 45.3 5.6 38 364-401 138-175 (529)
385 4ef8_A Dihydroorotate dehydrog 82.4 3.4 0.00011 40.3 8.0 86 10-103 127-226 (354)
386 3ndo_A Deoxyribose-phosphate a 82.3 7.7 0.00026 35.4 9.9 144 20-176 26-187 (231)
387 2qjg_A Putative aldolase MJ040 82.3 15 0.00053 33.5 12.3 127 27-159 103-236 (273)
388 3s5w_A L-ornithine 5-monooxyge 82.0 0.76 2.6E-05 45.7 3.3 33 369-401 31-68 (463)
389 2xag_A Lysine-specific histone 82.0 1.4 4.7E-05 48.1 5.6 34 367-400 277-310 (852)
390 4gut_A Lysine-specific histone 82.0 1.1 3.7E-05 48.4 4.7 33 368-400 336-368 (776)
391 4fcc_A Glutamate dehydrogenase 82.0 3.4 0.00012 41.5 8.0 50 339-397 215-264 (450)
392 2zbt_A Pyridoxal biosynthesis 81.9 8.4 0.00029 36.0 10.5 107 31-160 36-152 (297)
393 3cgb_A Pyridine nucleotide-dis 81.8 1.2 4E-05 44.9 4.6 33 369-401 37-71 (480)
394 3d1c_A Flavin-containing putat 81.7 1.5 5.2E-05 41.6 5.2 36 366-401 164-199 (369)
395 2vt3_A REX, redox-sensing tran 81.7 2.6 9E-05 38.0 6.5 36 368-403 85-123 (215)
396 2czd_A Orotidine 5'-phosphate 81.7 19 0.00066 31.6 12.3 146 13-175 2-152 (208)
397 1ydn_A Hydroxymethylglutaryl-C 81.5 34 0.0012 31.8 16.5 150 21-185 24-204 (295)
398 1d4d_A Flavocytochrome C fumar 81.3 1.1 3.7E-05 46.4 4.3 34 368-401 126-159 (572)
399 2wtb_A MFP2, fatty acid multif 81.2 0.67 2.3E-05 49.6 2.7 35 368-402 312-346 (725)
400 1wdk_A Fatty oxidation complex 81.1 0.69 2.4E-05 49.4 2.8 35 368-402 314-348 (715)
401 1y81_A Conserved hypothetical 81.1 2 6.7E-05 35.9 5.0 35 367-401 13-51 (138)
402 1vhn_A Putative flavin oxidore 81.0 11 0.00038 35.7 11.0 86 12-105 60-160 (318)
403 1vyr_A Pentaerythritol tetrani 81.0 4.8 0.00017 39.2 8.6 90 17-106 151-272 (364)
404 1o66_A 3-methyl-2-oxobutanoate 81.0 36 0.0012 31.8 14.7 147 34-191 35-207 (275)
405 1hyu_A AHPF, alkyl hydroperoxi 80.9 1.3 4.3E-05 45.3 4.6 32 368-399 212-243 (521)
406 3ru6_A Orotidine 5'-phosphate 80.8 14 0.00047 35.1 11.4 103 6-117 20-122 (303)
407 2bma_A Glutamate dehydrogenase 80.4 2.7 9.2E-05 42.5 6.6 52 339-399 232-284 (470)
408 2bc0_A NADH oxidase; flavoprot 80.4 1.1 3.8E-05 45.2 3.9 34 368-401 35-71 (490)
409 4b63_A L-ornithine N5 monooxyg 80.2 1.7 5.8E-05 44.1 5.2 38 364-401 242-281 (501)
410 2gou_A Oxidoreductase, FMN-bin 80.2 6.4 0.00022 38.3 9.2 84 24-107 162-272 (365)
411 2vp8_A Dihydropteroate synthas 80.0 15 0.00052 35.1 11.5 144 21-183 63-246 (318)
412 1to3_A Putative aldolase YIHT; 80.0 26 0.00087 33.1 13.1 126 29-159 114-253 (304)
413 2xve_A Flavin-containing monoo 79.9 1.8 6.3E-05 43.3 5.3 36 366-401 195-230 (464)
414 1fl2_A Alkyl hydroperoxide red 79.8 1.7 5.9E-05 40.2 4.8 35 367-401 143-177 (310)
415 2vdc_G Glutamate synthase [NAD 79.7 2.1 7.3E-05 42.9 5.7 36 366-401 262-298 (456)
416 1gu7_A Enoyl-[acyl-carrier-pro 79.7 1.5 5E-05 42.3 4.3 35 367-401 166-202 (364)
417 1tv5_A Dhodehase, dihydroorota 79.5 53 0.0018 32.8 16.9 38 64-108 296-334 (443)
418 3pl8_A Pyranose 2-oxidase; sub 79.5 1.7 5.8E-05 45.6 5.1 33 369-401 47-79 (623)
419 3nv9_A Malic enzyme; rossmann 79.4 2.6 8.9E-05 42.5 6.0 37 364-400 215-254 (487)
420 3qfa_A Thioredoxin reductase 1 79.4 1.6 5.3E-05 44.5 4.6 32 369-400 33-64 (519)
421 3k92_A NAD-GDH, NAD-specific g 79.4 2.9 0.0001 41.7 6.4 54 338-400 200-254 (424)
422 3l5l_A Xenobiotic reductase A; 79.4 8 0.00027 37.6 9.6 88 17-106 148-267 (363)
423 4dqv_A Probable peptide synthe 79.2 2.2 7.5E-05 42.9 5.6 38 365-402 70-111 (478)
424 3klj_A NAD(FAD)-dependent dehy 79.2 1.2 4E-05 43.7 3.5 34 368-401 146-179 (385)
425 3nzo_A UDP-N-acetylglucosamine 79.2 1.8 6.2E-05 42.4 4.9 35 367-401 34-70 (399)
426 1oy0_A Ketopantoate hydroxymet 79.0 42 0.0014 31.4 14.3 145 34-190 52-224 (281)
427 1ps9_A 2,4-dienoyl-COA reducta 79.0 5.3 0.00018 42.0 8.7 79 23-104 141-247 (671)
428 3tr2_A Orotidine 5'-phosphate 78.9 15 0.0005 33.6 10.7 103 5-117 3-105 (239)
429 2gqw_A Ferredoxin reductase; f 78.8 2.4 8.2E-05 41.5 5.7 35 367-401 144-178 (408)
430 2q0l_A TRXR, thioredoxin reduc 78.7 2.2 7.6E-05 39.4 5.2 35 367-401 142-176 (311)
431 2rdx_A Mandelate racemase/muco 78.6 43 0.0015 32.3 14.7 157 16-192 140-300 (379)
432 1vdc_A NTR, NADPH dependent th 78.5 1.9 6.5E-05 40.3 4.6 35 367-401 158-192 (333)
433 3l5a_A NADH/flavin oxidoreduct 78.5 5.2 0.00018 39.8 8.0 91 14-107 157-287 (419)
434 2r14_A Morphinone reductase; H 78.3 12 0.00042 36.5 10.6 90 17-106 156-276 (377)
435 1nhp_A NADH peroxidase; oxidor 78.0 2.6 8.9E-05 41.7 5.7 35 367-401 148-182 (447)
436 2vn8_A Reticulon-4-interacting 77.8 2.1 7.1E-05 41.5 4.8 33 367-399 183-216 (375)
437 1ebd_A E3BD, dihydrolipoamide 77.8 2.6 9E-05 41.8 5.7 34 368-401 170-203 (455)
438 2a87_A TRXR, TR, thioredoxin r 77.8 2.1 7.2E-05 40.3 4.8 35 367-401 154-188 (335)
439 1xhc_A NADH oxidase /nitrite r 77.6 2 6.7E-05 41.6 4.6 34 368-401 143-176 (367)
440 2bc0_A NADH oxidase; flavoprot 77.5 2.9 9.9E-05 42.0 6.0 35 367-401 193-227 (490)
441 1lvl_A Dihydrolipoamide dehydr 77.5 2 6.7E-05 42.9 4.7 35 367-401 170-204 (458)
442 1bgv_A Glutamate dehydrogenase 77.5 4.1 0.00014 41.0 6.9 52 339-399 210-262 (449)
443 2zbw_A Thioredoxin reductase; 77.4 1.8 6.3E-05 40.5 4.2 35 367-401 151-185 (335)
444 2y7e_A 3-keto-5-aminohexanoate 77.3 43 0.0015 31.3 13.6 137 21-189 32-180 (282)
445 2gag_A Heterotetrameric sarcos 77.3 1.8 6.1E-05 47.8 4.6 34 368-401 128-161 (965)
446 1v59_A Dihydrolipoamide dehydr 77.1 2.5 8.7E-05 42.1 5.4 34 368-401 183-216 (478)
447 3r3j_A Glutamate dehydrogenase 77.0 3.1 0.00011 41.9 5.8 53 338-399 218-271 (456)
448 3zwt_A Dihydroorotate dehydrog 77.0 32 0.0011 33.4 13.1 85 13-105 149-254 (367)
449 3bo9_A Putative nitroalkan dio 76.8 35 0.0012 32.3 13.2 148 10-186 27-182 (326)
450 3kb6_A D-lactate dehydrogenase 76.7 2.4 8.3E-05 40.9 4.9 38 364-401 137-174 (334)
451 2q7v_A Thioredoxin reductase; 76.7 2.4 8.2E-05 39.6 4.8 35 367-401 151-185 (325)
452 3iv3_A Tagatose 1,6-diphosphat 76.6 49 0.0017 31.7 14.0 82 29-110 116-215 (332)
453 2gv8_A Monooxygenase; FMO, FAD 76.6 1.9 6.4E-05 42.8 4.2 36 366-401 210-246 (447)
454 3itj_A Thioredoxin reductase 1 76.5 2.4 8.1E-05 39.5 4.7 36 366-401 171-206 (338)
455 2v3a_A Rubredoxin reductase; a 76.4 3.2 0.00011 40.1 5.7 34 368-401 145-178 (384)
456 2et6_A (3R)-hydroxyacyl-COA de 76.4 2.1 7.2E-05 44.7 4.6 36 365-400 319-355 (604)
457 1m3u_A 3-methyl-2-oxobutanoate 76.3 49 0.0017 30.7 13.7 146 34-191 35-207 (264)
458 2h9a_B CO dehydrogenase/acetyl 76.3 48 0.0017 31.4 13.8 114 24-154 75-199 (310)
459 2qf7_A Pyruvate carboxylase pr 76.2 1.1E+02 0.0036 34.5 19.2 155 22-177 572-748 (1165)
460 3fr7_A Putative ketol-acid red 76.2 2.8 9.7E-05 42.7 5.3 36 366-401 51-93 (525)
461 2eq6_A Pyruvate dehydrogenase 76.2 2.8 9.6E-05 41.8 5.4 34 368-401 169-202 (464)
462 3kd9_A Coenzyme A disulfide re 76.1 3.4 0.00012 40.9 6.0 35 367-401 147-181 (449)
463 3pid_A UDP-glucose 6-dehydroge 76.1 1.3 4.6E-05 44.3 2.9 34 368-402 36-69 (432)
464 1trb_A Thioredoxin reductase; 76.0 2.5 8.5E-05 39.2 4.7 35 367-401 144-178 (320)
465 3pi7_A NADH oxidoreductase; gr 75.9 1.5 5.2E-05 42.0 3.2 35 369-403 166-201 (349)
466 2yqu_A 2-oxoglutarate dehydrog 75.9 2.9 9.9E-05 41.5 5.4 34 368-401 167-200 (455)
467 1zsy_A Mitochondrial 2-enoyl t 75.8 2.2 7.5E-05 41.0 4.3 32 367-398 167-199 (357)
468 3cmm_A Ubiquitin-activating en 75.8 1.4 4.9E-05 48.8 3.3 34 367-400 424-463 (1015)
469 3iup_A Putative NADPH:quinone 75.6 1 3.5E-05 43.9 1.9 35 368-402 171-207 (379)
470 4ab4_A Xenobiotic reductase B; 75.4 16 0.00055 35.5 10.4 137 16-162 142-310 (362)
471 1thf_D HISF protein; thermophI 75.3 39 0.0013 30.2 12.6 149 21-186 31-201 (253)
472 3ef6_A Toluene 1,2-dioxygenase 75.2 3.3 0.00011 40.5 5.5 35 367-401 142-176 (410)
473 2z5l_A Tylkr1, tylactone synth 74.9 3.2 0.00011 42.4 5.5 35 367-401 258-294 (511)
474 1icp_A OPR1, 12-oxophytodienoa 74.9 22 0.00074 34.7 11.3 91 16-106 156-277 (376)
475 1ges_A Glutathione reductase; 74.8 3.2 0.00011 41.2 5.4 34 368-401 167-200 (450)
476 1qo2_A Molecule: N-((5-phospho 74.7 9.6 0.00033 34.3 8.2 146 20-186 30-194 (241)
477 2r9z_A Glutathione amide reduc 74.7 3.2 0.00011 41.4 5.4 34 368-401 166-199 (463)
478 3tha_A Tryptophan synthase alp 74.7 40 0.0014 31.0 12.4 85 13-104 18-122 (252)
479 3gqv_A Enoyl reductase; medium 74.5 2.9 9.8E-05 40.5 4.8 33 366-398 163-196 (371)
480 3ic9_A Dihydrolipoamide dehydr 74.3 3.3 0.00011 41.7 5.4 35 367-401 173-207 (492)
481 1q1r_A Putidaredoxin reductase 74.2 3.6 0.00012 40.6 5.5 35 367-401 148-182 (431)
482 3eeg_A 2-isopropylmalate synth 74.2 38 0.0013 32.2 12.6 198 15-230 23-251 (325)
483 1w4x_A Phenylacetone monooxyge 74.1 2.8 9.6E-05 42.8 4.8 37 365-401 183-219 (542)
484 3bg3_A Pyruvate carboxylase, m 74.0 96 0.0033 32.9 20.8 209 21-230 123-358 (718)
485 2cw6_A Hydroxymethylglutaryl-C 74.0 23 0.00078 33.2 10.9 194 21-230 25-259 (298)
486 3zwc_A Peroxisomal bifunctiona 73.9 2 6.8E-05 46.1 3.7 34 368-401 316-349 (742)
487 2fr1_A Erythromycin synthase, 73.9 2.9 9.8E-05 42.4 4.8 35 367-401 225-261 (486)
488 4ggo_A Trans-2-enoyl-COA reduc 73.8 4 0.00014 40.4 5.6 67 332-401 14-85 (401)
489 2zvr_A Uncharacterized protein 73.8 51 0.0017 29.9 13.2 43 28-71 46-89 (290)
490 3s5w_A L-ornithine 5-monooxyge 73.8 2 7E-05 42.5 3.6 35 367-401 226-262 (463)
491 3ab1_A Ferredoxin--NADP reduct 73.7 2.6 8.8E-05 40.1 4.2 35 367-401 162-196 (360)
492 3noy_A 4-hydroxy-3-methylbut-2 73.6 7.2 0.00025 37.9 7.2 49 135-185 41-89 (366)
493 3kru_A NADH:flavin oxidoreduct 73.5 24 0.00083 33.9 11.1 86 16-105 132-249 (343)
494 2a8x_A Dihydrolipoyl dehydroge 73.5 3.6 0.00012 40.9 5.4 34 368-401 171-204 (464)
495 3gka_A N-ethylmaleimide reduct 73.3 20 0.0007 34.7 10.6 138 15-163 149-319 (361)
496 1ydo_A HMG-COA lyase; TIM-barr 73.2 35 0.0012 32.2 12.0 142 21-178 26-197 (307)
497 2hzg_A Mandelate racemase/muco 73.1 63 0.0021 31.4 14.3 157 19-192 143-309 (401)
498 1gte_A Dihydropyrimidine dehyd 73.1 21 0.00073 39.5 11.9 87 9-104 634-734 (1025)
499 3mje_A AMPHB; rossmann fold, o 73.0 3.7 0.00013 41.8 5.3 33 368-400 239-273 (496)
500 3cgb_A Pyridine nucleotide-dis 72.9 3.4 0.00012 41.4 5.0 34 367-400 185-218 (480)
No 1
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=100.00 E-value=5.7e-97 Score=773.06 Aligned_cols=395 Identities=50% Similarity=0.865 Sum_probs=355.8
Q ss_pred CCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHH
Q 015614 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87 (403)
Q Consensus 8 ~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 87 (403)
+|+|+||+||++++++|++.+++++.+.|+|+||||+|+|.+.++.++++.+++..++|+|||+|+++|||.++.++++|
T Consensus 2 ~~~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRvD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 81 (523)
T 2o7s_A 2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENER 81 (523)
T ss_dssp CSCCEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEEGGGCSSCCHHHHHHHHHHHCSSCEEEECCBGGGTSSBCSCHHHH
T ss_pred CCCCEEEEEecCCCHHHHHHHHHHhhhcCCCEEEEEEecccccChHHHHHHHHhcCCCcEEEEecccccCCCCCCCHHHH
Confidence 68999999999999999999999888899999999999999776556899998889999999999999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 015614 88 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDIT 167 (403)
Q Consensus 88 ~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~ 167 (403)
+++|+.++++|+||||||++.+++.++++...++.++|||+|||||++||+++++.++|++|.++||||||+|+++++.+
T Consensus 82 ~~ll~~~~~~~~~yiDvEl~~~~~~~~~~~~~~~~~~kiI~S~H~f~~tp~~~~~~~~~~~~~~~gaDivKia~~a~~~~ 161 (523)
T 2o7s_A 82 RDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIA 161 (523)
T ss_dssp HHHHHHHHHHTCSEEEEEHHHHHHHHHHTTTCCCTTCEEEEEEECSSCCCCHHHHHHHHHHHHTTTCSEEEEEEECSSGG
T ss_pred HHHHHHHHHhCCCEEEEECCCchHHHHHHHHhccCCCEEEEEcccCCCCcCHHHHHHHHHHHHHhCCCEEEEEecCCCHH
Confidence 99999999999999999999998888777655556899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCEEEEEcCccchhhhhhcCCCCCcccccccCCC--CCCCCCCHHHHHhhhhhccccccceEEeeec
Q 015614 168 EIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT--PVLGLPTVESLRQTYKVEHINADTKVFGLIS 245 (403)
Q Consensus 168 D~~~ll~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~lty~~~~~~--sApGQ~~~~~l~~~~~~~~~~~~~~~~~liG 245 (403)
|+++|++++.+.+.|+|+|+||+.|++||+++++|||++||++++.+ +||||+++++++++|++.+++.++++|||||
T Consensus 162 D~~~l~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~lt~~~l~~~~~sApGQ~~~~~l~~~~~~~~~~~~~~~~~viG 241 (523)
T 2o7s_A 162 DVARMFHITSKAQVPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241 (523)
T ss_dssp GHHHHHHHHHHCSSCEEEEEESGGGTHHHHCTTTTTCSEEECBSSTTCCSSTTCCBHHHHHHTSCGGGCCTTCEEEEEEE
T ss_pred HHHHHHHHHhhcCCCEEEEEcCCCCchhhhhhhhcCCceeecCCCccccCCCCCCcHHHHHHHHhhhhccccceEEEEEC
Confidence 99999999988899999999999999999999999999999999866 9999999999999999999998899999999
Q ss_pred cCCcccCCHHHHHHHHHhcCCCceEeecCcccHHHHHHHhcCCCCceEEecccchHHHHcccccCCHHHhhccceeEEEE
Q 015614 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 325 (403)
Q Consensus 246 ~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~igavNTi~~ 325 (403)
+||+||+||.|||++|+++|+|+.|.++++++++++++.++.++|.|+|||||||+++++|+|++++.|+.+||||||++
T Consensus 242 ~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~~~~l~~~~~~~~~~~~~G~nVTiP~K~~i~~~ld~~~~~A~~iGAvNti~~ 321 (523)
T 2o7s_A 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILR 321 (523)
T ss_dssp SSCTTCCHHHHHHHHHHHTTCSEEEEEEECSCHHHHHHHTCSTTEEEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEE
T ss_pred CCccCCccHHHHHHHHHHcCCCcEEEeEEcchHHHHHHHHhcCCCCEEEECCCCHHHHHHHhcccCHHHHHhCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 326 RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 326 ~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+..+|+|+||||||.||+.+|+..+...+...........+++++++|+||||+|||++++|.+.|++|+++||+.+
T Consensus 322 ~~~~gk~~g~nTD~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~ 398 (523)
T 2o7s_A 322 RKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYE 398 (523)
T ss_dssp CTTTCCEEEECCHHHHHHHHHHHHC-------------------CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHH
T ss_pred ecCCCeEEEEcCCHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 62278999999999999999987542111000000001235688999999999999999999999999999999854
No 2
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=100.00 E-value=7.6e-58 Score=436.14 Aligned_cols=231 Identities=21% Similarity=0.344 Sum_probs=207.9
Q ss_pred cCCCCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCc----hHHHHHHhcC-CCcEEEEeecCCCCCC
Q 015614 5 NITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG----KDLEIILTKK-PLPVLIVYRPKWAGGL 79 (403)
Q Consensus 5 ~~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~----~~l~~l~~~~-~~PiI~T~R~~~eGG~ 79 (403)
.+-.++|+|||||++++.+|++.+++.+...|+|+||||+|+|.+.++. +++..+|+.. ++|+|||+|+++|||.
T Consensus 14 ~ig~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~ 93 (258)
T 4h3d_A 14 TIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGE 93 (258)
T ss_dssp EETSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCS
T ss_pred EeCCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCC
Confidence 3456799999999999999999999999889999999999999987543 3455566554 7999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcC-CcEEEEeccccchHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEE
Q 015614 80 YEGDEHKRLEALHLAEDLG-ADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADII 157 (403)
Q Consensus 80 ~~~~~~~~~~ll~~~~~~g-~~yvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadiv 157 (403)
++.++++|+++++.+++.| +||||||+..+++..+++. ..+++++|||+|||||++||+++++.+++.+|.++||||+
T Consensus 94 ~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIv 173 (258)
T 4h3d_A 94 KLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLP 173 (258)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 9999999999999999998 9999999999998888877 3567899999999999999999999999999999999999
Q ss_pred EEEeecCCHhHHHHHHHHhcc-----CCCCEEEEEcCccchhhhhhcCCCCCcccccccCCCCCCCCCCHHHHHhhhhhc
Q 015614 158 KLVFSVNDITEIARIFQLLSH-----CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE 232 (403)
Q Consensus 158 Kia~~~~~~~D~~~ll~~~~~-----~~~p~i~~~MG~~G~~SRil~~~~gs~lty~~~~~~sApGQ~~~~~l~~~~~~~ 232 (403)
|+|+||++.+|+++|++++.+ .+.|+|+|+||+.|++||++++.|||++||+++++++||||+++++|+++|+.+
T Consensus 174 Kia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~fGS~lTf~~~~~~sAPGQl~~~el~~~l~lL 253 (258)
T 4h3d_A 174 KIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVISRLCGEIFGSALTFGAAKSVSAPGQISFKELNSVLNLL 253 (258)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECTGGGGGGGTCHHHHCBCEEECBCC---CTTCCBHHHHHHHHHHH
T ss_pred EEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCChHHHHHHHHhCCceEeccCCCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999998754 378999999999999999999999999999999999999999999999999876
Q ss_pred ccc
Q 015614 233 HIN 235 (403)
Q Consensus 233 ~~~ 235 (403)
+.+
T Consensus 254 ~~~ 256 (258)
T 4h3d_A 254 HKS 256 (258)
T ss_dssp HHT
T ss_pred HHh
Confidence 543
No 3
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=100.00 E-value=3.5e-57 Score=431.33 Aligned_cols=228 Identities=19% Similarity=0.284 Sum_probs=208.9
Q ss_pred cCCCCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCc----hHHHHHHhcC-CCcEEEEeecCCCCCC
Q 015614 5 NITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG----KDLEIILTKK-PLPVLIVYRPKWAGGL 79 (403)
Q Consensus 5 ~~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~----~~l~~l~~~~-~~PiI~T~R~~~eGG~ 79 (403)
.+.+++|+||+||++++.+|++.+++++.+.|+|+||||+|+|.+.++. +++..+|+.. ++|+|||+|+++|||.
T Consensus 14 ~~g~~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~ 93 (257)
T 2yr1_A 14 WIGGTEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQ 93 (257)
T ss_dssp EESSSSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCC
T ss_pred eeCCCCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCC
Confidence 4568899999999999999999999998889999999999999876542 3556777776 8999999999999999
Q ss_pred C-CCCHHHHHHHHHHHHHcC-CcEEEEeccccchHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCE
Q 015614 80 Y-EGDEHKRLEALHLAEDLG-ADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADI 156 (403)
Q Consensus 80 ~-~~~~~~~~~ll~~~~~~g-~~yvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadi 156 (403)
+ +.++++|+++++.++++| +||||||+..++ ..+++. ..+++++|||+|||||++||+.++|.++|++|+++||||
T Consensus 94 ~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDi 172 (257)
T 2yr1_A 94 PIPLNEAEVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAERYGADI 172 (257)
T ss_dssp CCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCE
Confidence 9 899999999999999999 999999999877 666665 346789999999999999999999999999999999999
Q ss_pred EEEEeecCCHhHHHHHHHHhccC----CCCEEEEEcCccchhhhhhcCCCCCcccccccCCCCCCCCCCHHHHHhhhhhc
Q 015614 157 IKLVFSVNDITEIARIFQLLSHC----QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE 232 (403)
Q Consensus 157 vKia~~~~~~~D~~~ll~~~~~~----~~p~i~~~MG~~G~~SRil~~~~gs~lty~~~~~~sApGQ~~~~~l~~~~~~~ 232 (403)
+|+|+||++.+|++++++++.+. +.|+|+|+||+.|++||+++++|||++||+++++++||||+++++|+++++.+
T Consensus 173 vKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~Tf~~l~~~sAPGQl~~~el~~~l~~l 252 (257)
T 2yr1_A 173 AKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMGGLGAITRLAGWLFGSAVTFAVGNQSSAPGQIPIDDVRTVLSIL 252 (257)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECTTTTHHHHHHGGGGTBCEEECBSSSCSSTTCCBHHHHHHHHHHH
T ss_pred EEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECCCCcchHHHHHHHhCCceEecCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999997653 68999999999999999999999999999999999999999999999999865
Q ss_pred c
Q 015614 233 H 233 (403)
Q Consensus 233 ~ 233 (403)
+
T Consensus 253 ~ 253 (257)
T 2yr1_A 253 Q 253 (257)
T ss_dssp H
T ss_pred H
Confidence 4
No 4
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=100.00 E-value=1.7e-57 Score=437.09 Aligned_cols=229 Identities=23% Similarity=0.340 Sum_probs=211.0
Q ss_pred cCCCCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCc----hHHHHHHhcC-CCcEEEEeecCCCCCC
Q 015614 5 NITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG----KDLEIILTKK-PLPVLIVYRPKWAGGL 79 (403)
Q Consensus 5 ~~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~----~~l~~l~~~~-~~PiI~T~R~~~eGG~ 79 (403)
.+..++|+|||||++++.+|++.+++++...|+|+||||+|+|.+.++. +++..+|+.. ++|+|||+|+++|||.
T Consensus 34 ~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~ 113 (276)
T 3o1n_A 34 VVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGE 113 (276)
T ss_dssp EETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCS
T ss_pred EeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCC
Confidence 4567899999999999999999999998668999999999999977652 4556677776 8999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcC-CcEEEEeccccchHHHHHHh-ccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEE
Q 015614 80 YEGDEHKRLEALHLAEDLG-ADYVDFELKVASNILGKQYS-SHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADII 157 (403)
Q Consensus 80 ~~~~~~~~~~ll~~~~~~g-~~yvDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadiv 157 (403)
++.++++|+++++.++++| +||||||+..+++.+++++. ++++++|||+|||||++||+.++|.++|++|+++||||+
T Consensus 114 ~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIv 193 (276)
T 3o1n_A 114 QALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIP 193 (276)
T ss_dssp BCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEE
Confidence 9999999999999999999 99999999999888888873 467899999999999999999999999999999999999
Q ss_pred EEEeecCCHhHHHHHHHHhcc-----CCCCEEEEEcCccchhhhhhcCCCCCcccccccCCCCCCCCCCHHHHHhhhhhc
Q 015614 158 KLVFSVNDITEIARIFQLLSH-----CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE 232 (403)
Q Consensus 158 Kia~~~~~~~D~~~ll~~~~~-----~~~p~i~~~MG~~G~~SRil~~~~gs~lty~~~~~~sApGQ~~~~~l~~~~~~~ 232 (403)
|||+||++.+|+++|++++.+ .++|+|+|+||+.|++||+++++|||++||+++++++||||+++++|+++++.+
T Consensus 194 Kia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~G~~SRi~~~~~GS~vTf~~l~~~sAPGQl~~~~l~~~l~~l 273 (276)
T 3o1n_A 194 KIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKASAPGAISVADLRTVLTIL 273 (276)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECSGGGTHHHHCHHHHTCCEEECBSSCCSSTTCCBHHHHHHHHHHH
T ss_pred EEEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECCCchhhHHHHHHHhCCceEecCCCCCCCCCCCCHHHHHHHHHHh
Confidence 999999999999999999754 578999999999999999999999999999999999999999999999999865
Q ss_pred c
Q 015614 233 H 233 (403)
Q Consensus 233 ~ 233 (403)
+
T Consensus 274 ~ 274 (276)
T 3o1n_A 274 H 274 (276)
T ss_dssp H
T ss_pred c
Confidence 3
No 5
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=100.00 E-value=7e-57 Score=425.05 Aligned_cols=222 Identities=21% Similarity=0.343 Sum_probs=198.2
Q ss_pred CeeEEEeccc-CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC---chHHHHHHhcC-CCcEEEEeecCCCCCCCCCCH
Q 015614 10 TTMICAPLMA-QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDE 84 (403)
Q Consensus 10 ~~~icv~l~~-~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~---~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~ 84 (403)
+|+||+||++ ++.+|++.+++.+.+.|+|+||||+|+|.+.+. .++++.+|+.. ++|+|||+|+++|||.++.++
T Consensus 3 ~p~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~ 82 (238)
T 1sfl_A 3 HVEVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTN 82 (238)
T ss_dssp CCEEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCH
T ss_pred CCeEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCH
Confidence 5899999999 999999999998888899999999999987642 23445566655 799999999999999999999
Q ss_pred HHHHHHHHHHHHc-CCcEEEEeccc--cchHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015614 85 HKRLEALHLAEDL-GADYVDFELKV--ASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 85 ~~~~~ll~~~~~~-g~~yvDiEl~~--~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia 160 (403)
++|+++++.++++ ++||||||+.. +++..+++. ..+++++|||+|||||++||+.+++.++|++|+++||||+|+|
T Consensus 83 ~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia 162 (238)
T 1sfl_A 83 DSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLA 162 (238)
T ss_dssp HHHHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999998 59999999999 777777776 4567899999999999999999999999999999999999999
Q ss_pred eecCCHhHHHHHHHHhcc----CCCCEEEEEcCccchhhhhhcCCCCCcccccccCCCCCCCCCCHHHHHhhhhh
Q 015614 161 FSVNDITEIARIFQLLSH----CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKV 231 (403)
Q Consensus 161 ~~~~~~~D~~~ll~~~~~----~~~p~i~~~MG~~G~~SRil~~~~gs~lty~~~~~~sApGQ~~~~~l~~~~~~ 231 (403)
+||++.+|++++++++.+ .+.|+|+|+||+.|++||+++++|||++||+++++++||||+++++|+++|+.
T Consensus 163 ~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~tf~~l~~~sAPGQl~~~el~~~l~~ 237 (238)
T 1sfl_A 163 VMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTL 237 (238)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTGGGHHHHHTGGGGTBCEEEEBSSCCSSTTCCBHHHHHHHHTT
T ss_pred ecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECCCCchHHHHHHHHhCCCeeecCCCCCCCCCCCCHHHHHHHHHh
Confidence 999999999999999765 47899999999999999999999999999999999999999999999999864
No 6
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=100.00 E-value=2.3e-55 Score=417.78 Aligned_cols=222 Identities=18% Similarity=0.266 Sum_probs=186.7
Q ss_pred cCCCCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHh-cCCCcEEEEeecCCCCCCCCCC
Q 015614 5 NITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILT-KKPLPVLIVYRPKWAGGLYEGD 83 (403)
Q Consensus 5 ~~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~-~~~~PiI~T~R~~~eGG~~~~~ 83 (403)
.+.+++|+|||||++++.+|++ ++..+...|+|+||||+|+|...+..+...++++ ..++|+|||+|+++|||.++.+
T Consensus 29 ~~g~g~pkIcvpl~~~t~~e~~-~~~~~~~~gaD~VElRvD~l~~~~~~~v~~~l~~~~~~~PiI~T~Rt~~EGG~~~~~ 107 (259)
T 3l9c_A 29 QMGRGSMKIVVPVMPQNIEEAN-QLDLTRIDSTDIIEWRADYLVKDDILTVAPAIFEKFSGHEVIFTLRTEKEGGNISLS 107 (259)
T ss_dssp -----CCEEEEEECCSSHHHHH-HCCCTTCCTTCEEEEEGGGSCGGGHHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCC
T ss_pred EECCCCcEEEEEecCCCHHHHH-HHHHhhccCCCEEEEEeccccchhHHHHHHHHHHhcCCCcEEEEEeehhhCCCCCCC
Confidence 3456789999999999999997 5555556799999999999986432222334444 4689999999999999999999
Q ss_pred HHHHHHHHHHHHH-cCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEee
Q 015614 84 EHKRLEALHLAED-LGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS 162 (403)
Q Consensus 84 ~~~~~~ll~~~~~-~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~ 162 (403)
+++|+++|+.+++ +++||||||++.+++.+++++ +.+|||+|||||++||+ +|.++|++|.++||||+|||+|
T Consensus 108 ~~~y~~ll~~~~~~~~~dyIDVEl~~~~~~~~~l~----~~~kiI~S~Hdf~~tp~--el~~~~~~~~~~GaDIvKia~~ 181 (259)
T 3l9c_A 108 NEDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMY----DFSNLILSYHNFEETPE--NLMEVFSELTALAPRVVKIAVM 181 (259)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEEHHHHGGGGGGGT----TCSSEEEEEEESSCCCT--THHHHHHHHHHTCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECcCCHHHHHHHH----hcCeEEEEeccCCCCHH--HHHHHHHHHHHcCCCEEEEEec
Confidence 9999999999998 789999999999887776663 45699999999999998 8999999999999999999999
Q ss_pred cCCHhHHHHHHHHhcc-----CCCCEEEEEcCccchhhhhhcCCCCCcccccccCCCCCCCCCCHHHHHhhhhhcc
Q 015614 163 VNDITEIARIFQLLSH-----CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEH 233 (403)
Q Consensus 163 ~~~~~D~~~ll~~~~~-----~~~p~i~~~MG~~G~~SRil~~~~gs~lty~~~~~~sApGQ~~~~~l~~~~~~~~ 233 (403)
|++.+|+++|++++.+ .+.|+|+|+||+.|++||+++++|||++||+++++++||||+++++|+++++.++
T Consensus 182 a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~G~~SRi~~~~~GS~lTf~~l~~~sAPGQl~~~el~~~l~~l~ 257 (259)
T 3l9c_A 182 PKNEQDVLDLMNYTRGFKTLNPNQEYVTMSMSKLGRISRLAADLIGSSWTFASLEQESAPGQISLADMRKIKEVLD 257 (259)
T ss_dssp CSSHHHHHHHHHHHHHHHHHCTTSEEEEEECTGGGHHHHHTHHHHTBSEEECBC-------CCBHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCCEEEEECCCCcccHHHHHHHhCCccccccCCCCCCCCCCCHHHHHHHHHHHc
Confidence 9999999999999754 3689999999999999999999999999999999999999999999999998653
No 7
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=100.00 E-value=3e-55 Score=411.86 Aligned_cols=219 Identities=17% Similarity=0.225 Sum_probs=187.2
Q ss_pred CCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhc-C-CCcEEEEeecCCCCCCCCCCHHH
Q 015614 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-K-PLPVLIVYRPKWAGGLYEGDEHK 86 (403)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~-~-~~PiI~T~R~~~eGG~~~~~~~~ 86 (403)
|+|+|||||++++.+|++.+++++ ..++|+||||+|+|.+.+ .+.+....+. . ++|+|||+|+++|||.++.++++
T Consensus 2 ~~~~Icvpi~~~t~~e~~~~~~~~-~~~~D~vElRvD~l~~~~-~~~v~~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~~ 79 (231)
T 2ocz_A 2 NAMRIVAPVMPRHFDEAQAIDISK-YEDVNLIEWRADFLPKDE-IVAVAPAIFEKFAGKEIIFTLRTVQEGGNITLSSQE 79 (231)
T ss_dssp -CCEEEEEECCSSHHHHHTCCGGG-GTTCSEEEEEGGGSCGGG-HHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCCHHH
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHh-ccCCCEEEEEeccccccC-HHHHHHHHHHHcCCCcEEEEEeecccCCCCCCCHHH
Confidence 789999999999999999999886 458999999999998654 3344433222 3 39999999999999999999999
Q ss_pred HHHHHHHHHHcC-CcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCC
Q 015614 87 RLEALHLAEDLG-ADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVND 165 (403)
Q Consensus 87 ~~~ll~~~~~~g-~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~~ 165 (403)
|+++++.++++| +||||||+..+++.++. .+ +.+|||+|||||++|| +++.++|++|+++||||+|||+||++
T Consensus 80 ~~~ll~~~~~~g~~d~iDvEl~~~~~~i~~---~~-~~~kvI~S~Hdf~~tp--~el~~~~~~~~~~gaDivKia~~a~~ 153 (231)
T 2ocz_A 80 YVDIIKEINAIYNPDYIDFEYFTHKSVFQE---ML-DFPNLILSYHNFEETP--ENLMEAFSEMTKLAPRVVKIAVMPQS 153 (231)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTTTGGGGGG---GT-TCSSEEEEEEESSCCC--TTHHHHHHHHHHTCCSEEEEEECCSS
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCHHHHHH---hh-cCCeEEEEecCCCCCH--HHHHHHHHHHHHcCCCEEEEEeecCC
Confidence 999999999999 99999999998765443 33 4499999999999999 89999999999999999999999999
Q ss_pred HhHHHHHHHHhcc-----CCCCEEEEEcCccchhhhhhcCCCCCcccccccCCCCCCCCCCHHHHHhhhhhcccc
Q 015614 166 ITEIARIFQLLSH-----CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235 (403)
Q Consensus 166 ~~D~~~ll~~~~~-----~~~p~i~~~MG~~G~~SRil~~~~gs~lty~~~~~~sApGQ~~~~~l~~~~~~~~~~ 235 (403)
.+|+++|++++.+ .+.|+|+|+||+.|++||+++++|||++||+++++++||||+++++|+++++.++.+
T Consensus 154 ~~D~l~ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~Tf~~l~~~sAPGQl~~~el~~~l~~l~~~ 228 (231)
T 2ocz_A 154 EQDVLDLMNYTRGFKTLNPEQEFATISMGKLGRLSRFAGDVIGSSWTYVSLDHVSGPGQVTLNDMKRIIEVLEMD 228 (231)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEECHHHHGGGGGCHHHHTCCEEECBC------CCCBHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEcCCCchhHHHHHHHhCCceEeccCCCCCCCCCCCHHHHHHHHHHhhhh
Confidence 9999999999754 367999999999999999999999999999999989999999999999999866543
No 8
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=100.00 E-value=4e-53 Score=394.48 Aligned_cols=212 Identities=25% Similarity=0.343 Sum_probs=185.6
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCc---hHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRL 88 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~ 88 (403)
+||+||++++.+|++.+++. .|+|+||||+|+|.+.+.. +++..+|+. .+|+|||+|+++|||. ++++|+
T Consensus 2 ~icv~l~~~~~~~~~~~~~~---~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~-~~PiI~T~R~~~eGG~---~~~~~~ 74 (219)
T 2egz_A 2 LIAVPLDDTNFSENLKKAKE---KGADIVELRVDQFSDTSLNYVKEKLEEVHSQ-GLKTILTIRSPEEGGR---EVKNRE 74 (219)
T ss_dssp EEEEEECSTTHHHHHHHHHH---HTCSEEEEEGGGCSCCCHHHHHHHHHHHHHT-TCEEEEECCCGGGTCC---CCTTHH
T ss_pred EEEEEeCCCCHHHHHHHHHH---cCCCEEEEEeccccccCHHHHHHHHHHHHhc-CCcEEEEEeehhccCC---CHHHHH
Confidence 59999999999999877765 4899999999999876532 356667765 7999999999999999 678999
Q ss_pred HHHHHHHHcCCcEEEEeccccchHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 015614 89 EALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDIT 167 (403)
Q Consensus 89 ~ll~~~~~~g~~yvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~ 167 (403)
++++.++++ +||||||++.+. ..+.+. ..+..++|||+|||||++||+.+++.++|++|+++|| |+|+|+||++.+
T Consensus 75 ~ll~~~~~~-~d~iDvEl~~~~-~~~~l~~~~~~~g~kvI~S~Hdf~~tp~~~el~~~~~~~~~~ga-ivKia~~a~~~~ 151 (219)
T 2egz_A 75 ELFEELSPL-SDYTDIELSSRG-LLVKLYNITKEAGKKLIISYHNFELTPPNWIIREVLREGYRYGG-IPKIAVKANSYE 151 (219)
T ss_dssp HHHHHHTTT-SSEEEEETTCHH-HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTS-EEEEEEECSSHH
T ss_pred HHHHHHHhc-CCEEEEEccCCc-cHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCC-EEEEEEccCCHH
Confidence 999999999 999999999851 111222 2334679999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHhccCCCCEEEEEcCccchhhhhhcCCCCCcccccccCCCCCCCCCCHHHHHhhhhhcc
Q 015614 168 EIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEH 233 (403)
Q Consensus 168 D~~~ll~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~lty~~~~~~sApGQ~~~~~l~~~~~~~~ 233 (403)
|++++++++.+.+.|+|+|+||+.|++||+++++|||++||+++++++||||+++++|+++++.++
T Consensus 152 D~l~ll~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~tf~~l~~~sAPGQl~~~el~~~l~~l~ 217 (219)
T 2egz_A 152 DVARLLCISRQVEGEKILISMGDYGKISRLAGYVFGSVITYCSLEKAFAPGQIPLEEMVELRKKFY 217 (219)
T ss_dssp HHHHHHHHHTTSCSCBEEEEESSGGGGHHHHGGGGTBCEEECBCC---CTTCCBHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcchhHHHHHHHhCCceEecCCCCCCCCCCCCHHHHHHHHHHhc
Confidence 999999999988999999999999999999999999999999999889999999999999998654
No 9
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=100.00 E-value=3.8e-51 Score=374.54 Aligned_cols=193 Identities=24% Similarity=0.331 Sum_probs=178.4
Q ss_pred EEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHH
Q 015614 14 CAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHL 93 (403)
Q Consensus 14 cv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 93 (403)
+|||++++.+| +.+++. +|+||||+|+|.+. +| ..++|+|||+|+++|||.++.++++|+++++.
T Consensus 2 ~vpl~~~t~~~-~~~~~~-----aD~vElRvD~l~~~--------lr-~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 66 (196)
T 2ox1_A 2 KLVATLSSPEE-LELAEK-----ADVVELRIDLFDFS--------GA-RVDKEKILTCRRVSDGGKFEGDERERIEKMKR 66 (196)
T ss_dssp EEEEEECSHHH-HHHTTT-----CSEEEEETTTSCCT--------TS-CCCSEEEEECCBGGGTSSBCSCHHHHHHHHHH
T ss_pred eeeEcCCCHHH-HHHHhc-----CCEEEEEEchhhhh--------HH-hcCCcEEEEEeecccCCCCCCCHHHHHHHHHH
Confidence 79999999999 876543 89999999999864 44 56899999999999999999999999999999
Q ss_pred HHHcCC-cEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHhHHHHH
Q 015614 94 AEDLGA-DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARI 172 (403)
Q Consensus 94 ~~~~g~-~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~D~~~l 172 (403)
++++|+ ||||||++.+++.+ ++++|||+|||||++||+|+++.++++ +++| ||+|+|+||++.+|++++
T Consensus 67 ~~~~g~~d~iDvEl~~~~~~i-------~~~~kvI~S~Hdf~~tp~~~~l~~~~~--~~~g-DivKia~~a~~~~D~l~l 136 (196)
T 2ox1_A 67 AFDSLNPDYVDLESDLPDSAF-------DFNCRIIESYHNFIRTPDYSELKGIVE--GRRG-DLVKIATMGKSKRDVETI 136 (196)
T ss_dssp HHHHHCCSEEEEETTSCGGGC-------CCSSEEEEEEEESSCCCCHHHHHHHHH--TCCS-SEEEEEEECCSHHHHHHH
T ss_pred HHHhCCCcEEEEECCCCHhHH-------hCCCEEEEEecCCCCCcCHHHHHHHHH--HHcC-CEEEEEEcCCCHHHHHHH
Confidence 999997 99999999887652 278999999999999999999999999 8899 999999999999999999
Q ss_pred HHHhccCCCCEEEEEcCccchhhhhhcCCCCCcccccccCCCCCCCCCCHHHHHhhhhhc
Q 015614 173 FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE 232 (403)
Q Consensus 173 l~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~lty~~~~~~sApGQ~~~~~l~~~~~~~ 232 (403)
++++.+.+ |+|+|+||+.|++||+++++|||++||+++++++||||+++++++++++.+
T Consensus 137 l~~~~~~~-p~I~~~MG~~G~~SRi~~~~~gs~~t~~~~~~~sAPGQl~~~el~~~l~~l 195 (196)
T 2ox1_A 137 VRILTNYD-DVVAFLMGERFSFTRVLAAYLGSPFIYCYVGSPKAPGQISLDDAREIISRL 195 (196)
T ss_dssp HHHHHHCS-SEEEEEESGGGTHHHHHHHHTTCSEEEEESSSCSSTTCCBHHHHHHHHHHH
T ss_pred HHHHhhCC-CeEEEEcCCCchhHHHhHhhhCCceEeccCCCCCCCCCCCHHHHHHHHHHh
Confidence 99988776 999999999999999999999999999999888999999999999998754
No 10
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=100.00 E-value=2.5e-48 Score=372.55 Aligned_cols=156 Identities=28% Similarity=0.470 Sum_probs=143.4
Q ss_pred ccccceEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcC-CCCceEEecccchHHHHcccccC
Q 015614 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS-PDFAGFSVGFPYKEAVMKFCDEV 310 (403)
Q Consensus 234 ~~~~~~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~-~~~~G~~VT~P~K~~v~~~~d~~ 310 (403)
++.+|++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++. ++|+|+|||||||+++++|+|++
T Consensus 2 I~g~T~l~gviG~PI~HS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~l~~~~~~~G~nVTiP~K~~~~~~lD~l 81 (269)
T 3tum_A 2 IRGSTELVAIVGSPIAQVKSPQNFNTWFNHNNCNLAMLPIDLHEAALDSFADTLRGWQNLRGCVVTVPYKQALANRVDGL 81 (269)
T ss_dssp -CTTCEEEEEEESSCTTCCHHHHHHHHHHHTTCSEEEEEEEBCGGGHHHHHHHHHHBTTEEEEEECTTCHHHHHTTSSEE
T ss_pred cCCCceEEEEECCCcchhhhHHHHHHHHHHcCCCeEEEEeecCHhhHHHHHHHHHhccCCCeeEeccccHHHHHHHhccC
Confidence 467899999999999999999999999999999999999998 479999988865 58999999999999999999999
Q ss_pred CHHHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHC
Q 015614 311 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR 390 (403)
Q Consensus 311 ~~~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~ 390 (403)
|+.|+.+||||||++.+ ||+|+||||||.||+.+|++. +...++++++|+||||||||++|+|.++
T Consensus 82 s~~A~~iGAVNTi~~~~-dG~l~G~NTD~~Gf~~~L~~~-------------g~~~~~~~~lilGaGGaarai~~aL~~~ 147 (269)
T 3tum_A 82 SERAAALGSINVIRRER-DGRLLGDNVDGAGFLGAAHKH-------------GFEPAGKRALVIGCGGVGSAIAYALAEA 147 (269)
T ss_dssp CHHHHHHTCCSEEEECT-TSCEEEECCHHHHHHHHHHHT-------------TCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CHHHHHcCceeEEEECC-CCEEEEEEcChHHHHHHHHHh-------------CCCcccCeEEEEecHHHHHHHHHHHHHh
Confidence 99999999999999973 899999999999999998764 1356789999999999999999999999
Q ss_pred CC-eEEEEecCCCC
Q 015614 391 GA-RVVIFDIDFGT 403 (403)
Q Consensus 391 g~-~i~v~nR~~~k 403 (403)
|+ +|+|+||+.+|
T Consensus 148 g~~~i~i~nRt~~r 161 (269)
T 3tum_A 148 GIASITLCDPSTAR 161 (269)
T ss_dssp TCSEEEEECSCHHH
T ss_pred CCCeEEEeCCCHHH
Confidence 98 99999998653
No 11
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=100.00 E-value=1e-45 Score=361.42 Aligned_cols=154 Identities=30% Similarity=0.522 Sum_probs=141.8
Q ss_pred ccccccceEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHccccc
Q 015614 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309 (403)
Q Consensus 232 ~~~~~~~~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~ 309 (403)
..++.+|++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++..+|.|+|||||||+++++|+|+
T Consensus 25 ~~i~~~t~~~gviG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~lD~ 104 (312)
T 3t4e_A 25 MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPYTYMAFEVDNTTFASAIEGLKALKMRGTGVSMPNKQLACEYVDE 104 (312)
T ss_dssp -----CCEEEEEEESCCTTCSHHHHHHHHHHHHTCSEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTSHHHHGGGCSE
T ss_pred cccCCCceEEEEECCCccccccHHHHHHHHHHcCCCcEEEeEecCHHHHHHHHHHHhhCCCCEEEECchhHHHHHHHhhh
Confidence 34667789999999999999999999999999999999999988 5899999999889999999999999999999999
Q ss_pred CCHHHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHH
Q 015614 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389 (403)
Q Consensus 310 ~~~~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~ 389 (403)
+|+.|+.|||||||+++ +|+|+||||||.||+.+|++. +..+++++++|+||||+|||++++|.+
T Consensus 105 ls~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-------------~~~l~gk~~lVlGAGGaaraia~~L~~ 169 (312)
T 3t4e_A 105 LTPAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-------------GFDMRGKTMVLLGAGGAATAIGAQAAI 169 (312)
T ss_dssp ECHHHHHHTCCSEEEEE--TTEEEEECHHHHHHHHHHHHT-------------TCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred cCHHHHHhCceeEEEec--CCEEEEeCCcHHHHHHHHHhc-------------CCCcCCCEEEEECcCHHHHHHHHHHHH
Confidence 99999999999999987 999999999999999998753 145678999999999999999999999
Q ss_pred CCC-eEEEEecC
Q 015614 390 RGA-RVVIFDID 400 (403)
Q Consensus 390 ~g~-~i~v~nR~ 400 (403)
+|+ +|+|+||+
T Consensus 170 ~G~~~v~v~nRt 181 (312)
T 3t4e_A 170 EGIKEIKLFNRK 181 (312)
T ss_dssp TTCSEEEEEECS
T ss_pred cCCCEEEEEECC
Confidence 999 89999999
No 12
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=100.00 E-value=4.5e-45 Score=352.47 Aligned_cols=154 Identities=26% Similarity=0.432 Sum_probs=141.2
Q ss_pred cccceEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccCCH
Q 015614 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312 (403)
Q Consensus 235 ~~~~~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~ 312 (403)
..++++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++..+|+|+|||||||+++++|+|++|+
T Consensus 5 ~~~m~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~ld~l~~ 84 (281)
T 3o8q_A 5 ASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLTE 84 (281)
T ss_dssp ---CEEEEEECCSSSCCCHHHHHHHHHHHTTCCEEEEEECCCTTCHHHHHHHHHHTTCCEEEECTTSHHHHHHHCSEECH
T ss_pred cccccEEEEECCCCCccCcHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHHhCCCCEEEECCccHHHHHHHHhhcCH
Confidence 44578999999999999999999999999999999999987 5899999999888999999999999999999999999
Q ss_pred HHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCC
Q 015614 313 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392 (403)
Q Consensus 313 ~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~ 392 (403)
.|+.+||||||++.+ ||+|+||||||.||+.+|++. +..+++++++|+|+||+||+++++|.+.|+
T Consensus 85 ~A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~L~~~-------------~~~l~~k~vlvlGaGg~g~aia~~L~~~G~ 150 (281)
T 3o8q_A 85 RARLAGAVNTLKKLD-DGEILGDNTDGEGLVQDLLAQ-------------QVLLKGATILLIGAGGAARGVLKPLLDQQP 150 (281)
T ss_dssp HHHHHTCCSEEEECT-TSCEEEECCHHHHHHHHHHHT-------------TCCCTTCEEEEECCSHHHHHHHHHHHTTCC
T ss_pred HHHhhCeeeEEEEcC-CCcEEEEecHHHHHHHHHHHh-------------CCCccCCEEEEECchHHHHHHHHHHHhcCC
Confidence 999999999999852 899999999999999998653 145678999999999999999999999998
Q ss_pred -eEEEEecCCC
Q 015614 393 -RVVIFDIDFG 402 (403)
Q Consensus 393 -~i~v~nR~~~ 402 (403)
+|+|+||+.+
T Consensus 151 ~~v~v~~R~~~ 161 (281)
T 3o8q_A 151 ASITVTNRTFA 161 (281)
T ss_dssp SEEEEEESSHH
T ss_pred CeEEEEECCHH
Confidence 9999999864
No 13
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=100.00 E-value=1.9e-45 Score=352.02 Aligned_cols=148 Identities=29% Similarity=0.557 Sum_probs=139.5
Q ss_pred cceEEeeeccCCcccCCHHHHHHHH----HhcCCCceEeecCcccHHHHHHHhcCCCCceEEecccchHHHHcccccCCH
Q 015614 237 DTKVFGLISKPVGHSKGPILHNPTF----RHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312 (403)
Q Consensus 237 ~~~~~~liG~pi~hS~SP~ihn~~~----~~~gl~~~y~~~~~~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~ 312 (403)
++++|||||+||+||+||.|||++| +++|+|+.|.++++++++++++.++.++|.|+|||||||+++++++|++|+
T Consensus 2 k~~~~~viG~Pi~hS~SP~~hn~~f~~~~~~~gl~~~Y~~~~v~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~ 81 (269)
T 3phh_A 2 KLKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKG 81 (269)
T ss_dssp CEEEEEEEESSCTTCCHHHHHHHHHHHHHHHHSSEEEEEEEECCSSSCHHHHHHHTTEEEEEECTTCHHHHHHHSSEECG
T ss_pred CceEEEEECCCccccccHHHHHHHHHHHHHHcCCCCEEeeEEhhhHHHHHHHHhhCCCCEEEEccccHHHHHHHHhhcCH
Confidence 4789999999999999999999999 999999999999999999999999889999999999999999999999999
Q ss_pred HHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCC
Q 015614 313 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392 (403)
Q Consensus 313 ~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~ 392 (403)
.|+.+||||||+++ +|+|+||||||.||+.+|++. .+++++|+|+||+||+++++|.+.|.
T Consensus 82 ~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-----------------~~k~vlvlGaGGaaraia~~L~~~G~ 142 (269)
T 3phh_A 82 IALECGAVNTLVLE--NDELVGYNTDALGFYLSLKQK-----------------NYQNALILGAGGSAKALACELKKQGL 142 (269)
T ss_dssp GGGGTTCCCEEEEE--TTEEEEECCHHHHHHHHCC--------------------CCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHhCceeEEEee--CCEEEEecChHHHHHHHHHHc-----------------CCCEEEEECCCHHHHHHHHHHHHCCC
Confidence 99999999999987 999999999999999997531 17899999999999999999999999
Q ss_pred eEEEEecCCCC
Q 015614 393 RVVIFDIDFGT 403 (403)
Q Consensus 393 ~i~v~nR~~~k 403 (403)
+|+|+||+.+|
T Consensus 143 ~v~V~nRt~~k 153 (269)
T 3phh_A 143 QVSVLNRSSRG 153 (269)
T ss_dssp EEEEECSSCTT
T ss_pred EEEEEeCCHHH
Confidence 99999999875
No 14
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.2e-45 Score=353.09 Aligned_cols=153 Identities=29% Similarity=0.413 Sum_probs=142.9
Q ss_pred cccceEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccCCH
Q 015614 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312 (403)
Q Consensus 235 ~~~~~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~ 312 (403)
+.+|++|||||+||+||+||.|||++|+++|+|+.|.++++ +++.++++.++.++|.|+|||||||+++++++|++|+
T Consensus 2 s~~t~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~v~~l~~~~~~G~nVTiP~K~~v~~~ld~ls~ 81 (282)
T 3fbt_A 2 SLNTSIYGLIGEKLGHSHSSYIHKLIFEKVGIKGIYNLFEVPKEKLKESVDTFKIIKCGGLNVTIPYKVEVMKELYEISE 81 (282)
T ss_dssp -CCCEEEEEEESSCCCCHHHHHHHHHHHHHTCCEEEEEEECCGGGHHHHHHHHHHTTCCEEEECTTCTTGGGGGCSEECH
T ss_pred CCcceEEEEECCCccccchHHHHHHHHHHcCCCcEEEEEECCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhcCH
Confidence 45689999999999999999999999999999999999988 5899999998888999999999999999999999999
Q ss_pred HHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCC
Q 015614 313 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392 (403)
Q Consensus 313 ~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~ 392 (403)
.|+.+||||||+++ +|+|+||||||.||+.+|++. +..+++++++|+|+||+||+++++|.++|+
T Consensus 82 ~A~~iGAVNTv~~~--~g~l~G~NTD~~G~~~~L~~~-------------~~~~~~k~vlvlGaGGaaraia~~L~~~G~ 146 (282)
T 3fbt_A 82 KARKIGAVNTLKFS--REGISGFNTDYIGFGKMLSKF-------------RVEIKNNICVVLGSGGAARAVLQYLKDNFA 146 (282)
T ss_dssp HHHHHTCCCEEEEC--SSCEEEECCHHHHHHHHHHHT-------------TCCCTTSEEEEECSSTTHHHHHHHHHHTTC
T ss_pred HHHHcCCcceEEee--CCEEEeeCCcHHHHHHHHHHc-------------CCCccCCEEEEECCcHHHHHHHHHHHHcCC
Confidence 99999999999987 899999999999999999753 145678999999999999999999999999
Q ss_pred -eEEEEecCCC
Q 015614 393 -RVVIFDIDFG 402 (403)
Q Consensus 393 -~i~v~nR~~~ 402 (403)
+|+|+|||.+
T Consensus 147 ~~v~v~nRt~~ 157 (282)
T 3fbt_A 147 KDIYVVTRNPE 157 (282)
T ss_dssp SEEEEEESCHH
T ss_pred CEEEEEeCCHH
Confidence 9999999864
No 15
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=100.00 E-value=4.8e-45 Score=352.76 Aligned_cols=152 Identities=28% Similarity=0.445 Sum_probs=141.6
Q ss_pred cceEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecC-------cccHHHHHHHhcCCCCceEEecccchHHHHccccc
Q 015614 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMF-------VDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309 (403)
Q Consensus 237 ~~~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~-------~~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~ 309 (403)
+|++|||||+||+||+||.|||++|+++|+|+.|.+++ .++++++++.++.++|.|+|||||||+++++|+|+
T Consensus 3 ~t~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~~~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~lD~ 82 (283)
T 3jyo_A 3 DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDE 82 (283)
T ss_dssp CCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEETTSTTTTTCCHHHHHHHHHHTTCCEEEECTTCTTTTGGGSSE
T ss_pred CceEEEEECCCccccccHHHHHHHHHHcCCCeEEEEEEccccCCCHHHHHHHHHHHhhCCCCEEEECcccHHHHHHHhhh
Confidence 57899999999999999999999999999999999994 36899999999889999999999999999999999
Q ss_pred CCHHHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHH
Q 015614 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389 (403)
Q Consensus 310 ~~~~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~ 389 (403)
+|+.|+.+||||||++++ +|+|+||||||.||+.+|++.. ..+++++++|+|+||+||+++++|.+
T Consensus 83 l~~~A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~l~~~~-------------~~l~~k~vlVlGaGG~g~aia~~L~~ 148 (283)
T 3jyo_A 83 VSEQATQLGAVNTVVIDA-TGHTTGHNTDVSGFGRGMEEGL-------------PNAKLDSVVQVGAGGVGNAVAYALVT 148 (283)
T ss_dssp ECHHHHHHTCCCEEEECT-TSCEEEECHHHHHHHHHHHHHC-------------TTCCCSEEEEECCSHHHHHHHHHHHH
T ss_pred CCHHHHHhCcceEEEECC-CCeEEEecCCHHHHHHHHHHhC-------------cCcCCCEEEEECCcHHHHHHHHHHHH
Confidence 999999999999999873 8999999999999999997642 34678999999999999999999999
Q ss_pred CCC-eEEEEecCCC
Q 015614 390 RGA-RVVIFDIDFG 402 (403)
Q Consensus 390 ~g~-~i~v~nR~~~ 402 (403)
+|+ +|+|+||+.+
T Consensus 149 ~G~~~v~i~~R~~~ 162 (283)
T 3jyo_A 149 HGVQKLQVADLDTS 162 (283)
T ss_dssp TTCSEEEEECSSHH
T ss_pred CCCCEEEEEECCHH
Confidence 999 8999999864
No 16
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=100.00 E-value=7.2e-45 Score=349.51 Aligned_cols=149 Identities=26% Similarity=0.392 Sum_probs=139.1
Q ss_pred eEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccCCHHHhh
Q 015614 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316 (403)
Q Consensus 239 ~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~ 316 (403)
.+|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++.++|.|+|||||||+++++++|++|+.|+.
T Consensus 3 ~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~ 82 (272)
T 3pwz_A 3 DRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMNITAPFKLRAFELADRRSERAQL 82 (272)
T ss_dssp EEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred cEEEEECCCcCCcccHHHHHHHHHHcCCCcEEEEEEcCHHHHHHHHHHHhhCCCCEEEECchhHHHHHHHHhhCCHHHHH
Confidence 5899999999999999999999999999999999987 58999999998889999999999999999999999999999
Q ss_pred ccceeEEEEeccCCeEEEEeccHHHHHHH-HHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCC-eE
Q 015614 317 IAAVNTIIRRPSDGKLIGYNTDCEASITA-IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RV 394 (403)
Q Consensus 317 igavNTi~~~~~~g~l~G~NTD~~G~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~-~i 394 (403)
+||||||+++ +|+|+||||||.||+.+ |++. +..+++++++|+|+||+||+++++|.++|+ +|
T Consensus 83 iGAvNTv~~~--~g~l~G~NTD~~G~~~~lL~~~-------------~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v 147 (272)
T 3pwz_A 83 ARAANALKFE--DGRIVAENFDGIGLLRDIEENL-------------GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSEL 147 (272)
T ss_dssp HTCCSEEEEE--TTEEEEECCHHHHHHHHHHTTS-------------CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEE
T ss_pred hCccceEEcc--CCeEEEecCCHHHHHHHHHHHc-------------CCCccCCEEEEECccHHHHHHHHHHHHcCCCEE
Confidence 9999999877 89999999999999999 7432 245679999999999999999999999998 99
Q ss_pred EEEecCCC
Q 015614 395 VIFDIDFG 402 (403)
Q Consensus 395 ~v~nR~~~ 402 (403)
+|+||+.+
T Consensus 148 ~i~~R~~~ 155 (272)
T 3pwz_A 148 VIANRDMA 155 (272)
T ss_dssp EEECSCHH
T ss_pred EEEeCCHH
Confidence 99999864
No 17
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=100.00 E-value=4.8e-45 Score=351.36 Aligned_cols=149 Identities=26% Similarity=0.516 Sum_probs=140.0
Q ss_pred EEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccCCHHHhhc
Q 015614 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317 (403)
Q Consensus 240 ~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~i 317 (403)
+|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++..+|.|+|||||||+++++|+|++|+.|+.+
T Consensus 2 ~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~i 81 (277)
T 3don_A 2 KFAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIPHKERIIPYLDDINEQAKSV 81 (277)
T ss_dssp EEEEEESSCTTCCHHHHHHHHHHHTTCCCEEEEEECCGGGGGGHHHHHHHTTCSEEEECTTCTTTTGGGCSEECHHHHHH
T ss_pred EEEEECCCccccccHHHHHHHHHHcCcCcEEEEEEcCHHHHHHHHHHHhhCCCCEEEECcCCHHHHHHHhhhCCHHHHHh
Confidence 599999999999999999999999999999999988 589999999988899999999999999999999999999999
Q ss_pred cceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCC-eEEE
Q 015614 318 AAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVI 396 (403)
Q Consensus 318 gavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~-~i~v 396 (403)
||||||+++ +|+|+||||||.||+.+|++.. ..+++++++|+|+||+||+++++|.+.|+ +|+|
T Consensus 82 GAVNTv~~~--~g~l~G~NTD~~G~~~~L~~~~-------------~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v 146 (277)
T 3don_A 82 GAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIY-------------EGIEDAYILILGAGGASKGIANELYKIVRPTLTV 146 (277)
T ss_dssp TCCCEEEEE--TTEEEEECCHHHHHHHHHHHHS-------------TTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEE
T ss_pred CceeEEEec--CCEEEEECChHHHHHHHHHHhC-------------CCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEE
Confidence 999999997 9999999999999999997641 34678999999999999999999999999 9999
Q ss_pred EecCCCC
Q 015614 397 FDIDFGT 403 (403)
Q Consensus 397 ~nR~~~k 403 (403)
+||+.+|
T Consensus 147 ~~R~~~~ 153 (277)
T 3don_A 147 ANRTMSR 153 (277)
T ss_dssp ECSCGGG
T ss_pred EeCCHHH
Confidence 9999754
No 18
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=100.00 E-value=1.7e-44 Score=353.14 Aligned_cols=152 Identities=32% Similarity=0.611 Sum_probs=143.3
Q ss_pred ccccceEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccCC
Q 015614 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311 (403)
Q Consensus 234 ~~~~~~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~ 311 (403)
++.++++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++.++|.|+|||||||+++++++|++|
T Consensus 33 i~~~t~~~gviG~Pi~hS~SP~ihn~~f~~~Gl~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~lD~ls 112 (315)
T 3tnl_A 33 ITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLS 112 (315)
T ss_dssp CCTTCEEEEEEESSCTTCSHHHHHHHHHHHHTCCEEEEEEECCHHHHHHHHHHHHHTTCCEEEECTTSTTTGGGGCSEEC
T ss_pred cCCcccEEEEECCCccccccHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHhcC
Confidence 566789999999999999999999999999999999999987 489999999988999999999999999999999999
Q ss_pred HHHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCC
Q 015614 312 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391 (403)
Q Consensus 312 ~~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g 391 (403)
+.|+.|||||||+++ +|+|+||||||.||+.+|++. +..+++|+++|+|+||+|||++++|.++|
T Consensus 113 ~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-------------~~~l~gk~~lVlGaGG~g~aia~~L~~~G 177 (315)
T 3tnl_A 113 PAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA-------------GHDIIGKKMTICGAGGAATAICIQAALDG 177 (315)
T ss_dssp HHHHHHTCCSEEEEE--TTEEEEECCHHHHHHHHHHHT-------------TCCCTTSEEEEECCSHHHHHHHHHHHHTT
T ss_pred HHHHHhCccceEEec--CCEEEEeCCCHHHHHHHHHHc-------------CCCccCCEEEEECCChHHHHHHHHHHHCC
Confidence 999999999999987 999999999999999999753 14578999999999999999999999999
Q ss_pred C-eEEEEecC
Q 015614 392 A-RVVIFDID 400 (403)
Q Consensus 392 ~-~i~v~nR~ 400 (403)
+ +|+|+||+
T Consensus 178 a~~V~i~nR~ 187 (315)
T 3tnl_A 178 VKEISIFNRK 187 (315)
T ss_dssp CSEEEEEECS
T ss_pred CCEEEEEECC
Confidence 9 99999999
No 19
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=100.00 E-value=1.4e-42 Score=333.79 Aligned_cols=150 Identities=21% Similarity=0.355 Sum_probs=140.0
Q ss_pred eEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccCCHHHhh
Q 015614 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316 (403)
Q Consensus 239 ~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~ 316 (403)
++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.+++++|.|+|||||||+++++++|++|+.|+.
T Consensus 2 ~~~~viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~~~~~~l~~~i~~~~~~~~~G~nVT~P~K~~v~~~ld~~~~~A~~ 81 (272)
T 1p77_A 2 DLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKL 81 (272)
T ss_dssp EEEEEEESSCTTCCHHHHHHHHHHHTTCCEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred cEEEEECCCcccccCHHHHHHHHHHCCcCeEEEEEEcCHHHHHHHHHHHHhCCCCEEEECcCCHHHHHHHHhhcCHHHHH
Confidence 6899999999999999999999999999999999987 68999999998889999999999999999999999999999
Q ss_pred ccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEE
Q 015614 317 IAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396 (403)
Q Consensus 317 igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~v 396 (403)
+||||||+++ .+|+|+||||||.||+.+|++. +..+++++++|+|+||+||+++++|.+.|.+|+|
T Consensus 82 igavNti~~~-~~g~l~g~NTD~~G~~~~L~~~-------------~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v 147 (272)
T 1p77_A 82 AEACNTLKKL-DDGKLYADNTDGIGLVTDLQRL-------------NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVL 147 (272)
T ss_dssp HTCCSEEEEC-TTSCEEEECCHHHHHHHHHHHT-------------TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEE
T ss_pred hCCceEEEEc-cCCEEEEecCCHHHHHHHHHHh-------------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 9999999984 2899999999999999998763 1346789999999999999999999999999999
Q ss_pred EecCCC
Q 015614 397 FDIDFG 402 (403)
Q Consensus 397 ~nR~~~ 402 (403)
+||+.+
T Consensus 148 ~~R~~~ 153 (272)
T 1p77_A 148 ANRTFS 153 (272)
T ss_dssp EESSHH
T ss_pred EECCHH
Confidence 999864
No 20
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=100.00 E-value=8.2e-43 Score=335.12 Aligned_cols=151 Identities=32% Similarity=0.511 Sum_probs=140.2
Q ss_pred ccccceE-EeeeccCCcccCCHHHHHHHHHhcCCCceEeecCcccHHHHHHHhcCCCCceEEecccchHHHHcccccCCH
Q 015614 234 INADTKV-FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312 (403)
Q Consensus 234 ~~~~~~~-~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~ 312 (403)
++.+|++ |||||+| ||+||.|||++|+++|+|+.|.+++.++++++++.++..+|.|+|||||||+++++++|++|+
T Consensus 2 i~~~t~~~~~viG~P--hS~SP~~hn~~~~~~gl~~~Y~~~~~~~l~~~~~~~~~~~~~G~nVTiP~K~~i~~~~d~~~~ 79 (271)
T 1npy_A 2 INKDTQLCMSLSGRP--SNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRGCAVSMPFKETCMPFLDEIHP 79 (271)
T ss_dssp CCTTCEEEEEECSSC--CSHHHHHHHHHHHHHTCCEEEEEECCSCHHHHHHHHHHHTCCEEEECTTCTTTTGGGCSEECH
T ss_pred cCCCceEEEEEECCC--CcccHHHHHHHHHHcCCCcEEEeechhhHHHHHHHhccCCCCeEEECcCCHHHHHHHHHHhhH
Confidence 4567888 9999999 999999999999999999999999988999999999888999999999999999999999999
Q ss_pred HHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCC
Q 015614 313 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392 (403)
Q Consensus 313 ~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~ 392 (403)
.|+.+||||||+++ +|+|+||||||.||..+|++. + .. .+++++|||+||+||+++++|.++|+
T Consensus 80 ~A~~iGAvNTi~~~--~g~l~g~NTD~~G~~~~l~~~----~---------~~-~~~~vlvlGaGgaarav~~~L~~~G~ 143 (271)
T 1npy_A 80 SAQAIESVNTIVND--NGFLRAYNTDYIAIVKLIEKY----H---------LN-KNAKVIVHGSGGMAKAVVAAFKNSGF 143 (271)
T ss_dssp HHHTTTCCCEEEEE--TTEEEEECHHHHHHHHHHHHT----T---------CC-TTSCEEEECSSTTHHHHHHHHHHTTC
T ss_pred HHHHhCCCCceECc--CCEEEeecCCHHHHHHHHHHh----C---------CC-CCCEEEEECCcHHHHHHHHHHHHCCC
Confidence 99999999999987 999999999999999998653 1 22 46889999999999999999999998
Q ss_pred -eEEEEecCCC
Q 015614 393 -RVVIFDIDFG 402 (403)
Q Consensus 393 -~i~v~nR~~~ 402 (403)
+|+|+|||.+
T Consensus 144 ~~i~v~nRt~~ 154 (271)
T 1npy_A 144 EKLKIYARNVK 154 (271)
T ss_dssp CCEEEECSCHH
T ss_pred CEEEEEeCCHH
Confidence 8999999864
No 21
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=100.00 E-value=1.9e-42 Score=329.40 Aligned_cols=139 Identities=29% Similarity=0.465 Sum_probs=129.9
Q ss_pred EEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccCCHHHhhc
Q 015614 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317 (403)
Q Consensus 240 ~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~i 317 (403)
+|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++ ++|+|+|||||||+++++|+|+ |+.|+.+
T Consensus 2 ~~~viG~pi~hS~SP~~hn~~~~~~gl~~~Y~~~~v~~~~l~~~~~~~~-~~~~G~nVT~P~K~~v~~~~d~-~~~A~~i 79 (253)
T 3u62_A 2 KFCIIGYPVRHSISPRLYNEYFKRAGMNHSYGMEEIPPESFDTEIRRIL-EEYDGFNATIPHKERVMRYVEP-SEDAQRI 79 (253)
T ss_dssp EEEEEESSCTTCSHHHHHHHHHHHHTCCCEEEEEECCGGGHHHHHHHHH-HHCSEEEECTTCTTGGGGGSEE-CHHHHHH
T ss_pred EEEEECCCccccccHHHHHHHHHHcCCCCEEEeEecCHHHHHHHHHHHh-hCCCceeecCChHHHHHHHhCC-CHHHHHc
Confidence 699999999999999999999999999999999988 58999999998 9999999999999999999999 9999999
Q ss_pred cceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCC-eEEE
Q 015614 318 AAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVI 396 (403)
Q Consensus 318 gavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~-~i~v 396 (403)
||||||++ + +||||||.||+.+|++. .+++ +++|+|+||+|||++++|.+.|+ +|+|
T Consensus 80 GAvNTi~~---~---~G~NTD~~G~~~~l~~~---------------~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v 137 (253)
T 3u62_A 80 KAVNCVFR---G---KGYNTDWVGVVKSLEGV---------------EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWV 137 (253)
T ss_dssp TCCCEEET---T---EEECCHHHHHHHHTTTC---------------CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CcceEeec---C---EEEcchHHHHHHHHHhc---------------CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEE
Confidence 99999986 3 99999999999997431 2467 89999999999999999999999 9999
Q ss_pred EecCCC
Q 015614 397 FDIDFG 402 (403)
Q Consensus 397 ~nR~~~ 402 (403)
+||+.+
T Consensus 138 ~nR~~~ 143 (253)
T 3u62_A 138 VNRTIE 143 (253)
T ss_dssp EESCHH
T ss_pred EeCCHH
Confidence 999864
No 22
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=100.00 E-value=2e-41 Score=325.46 Aligned_cols=150 Identities=28% Similarity=0.434 Sum_probs=139.9
Q ss_pred eEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccCCHHHhh
Q 015614 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316 (403)
Q Consensus 239 ~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~ 316 (403)
++|||||+||+||+||.|||++|+++|+++.|.++++ +++.++++.+++++|.|+|||||||+.+++++|++|+.|+.
T Consensus 2 ~~~~viG~pi~hS~Sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nVT~P~K~~~~~~ld~~~~~A~~ 81 (271)
T 1nyt_A 2 ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAAL 81 (271)
T ss_dssp CSEEEEESSCTTCSHHHHHHHHHHHHTCCCCEEEEECCTTCHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred CEEEEECCCcccccCHHHHHHHHHHCCCCcEEEEEEcCHHHHHHHHHHHHhCCCCeEEEccCCHHHHHHHHhhcCHHHHH
Confidence 5799999999999999999999999999999999987 68999999998889999999999999999999999999999
Q ss_pred ccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEE
Q 015614 317 IAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396 (403)
Q Consensus 317 igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~v 396 (403)
+||||||+++ .+|+|+||||||.||+.+|++. . ..+++++++|+|+||+||+++++|.+.|.+|+|
T Consensus 82 igavNti~~~-~~g~l~G~ntD~~G~~~~L~~~-~------------~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v 147 (271)
T 1nyt_A 82 AGAVNTLMRL-EDGRLLGDNTDGVGLLSDLERL-S------------FIRPGLRILLIGAGGASRGVLLPLLSLDCAVTI 147 (271)
T ss_dssp HTCCSEEEEC-TTSCEEEECCHHHHHHHHHHHH-T------------CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred hCCceEEEEc-CCCeEEEeCCCHHHHHHHHHhc-C------------cCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEE
Confidence 9999999984 2899999999999999999763 1 346789999999999999999999999999999
Q ss_pred EecCCC
Q 015614 397 FDIDFG 402 (403)
Q Consensus 397 ~nR~~~ 402 (403)
+||+.+
T Consensus 148 ~~R~~~ 153 (271)
T 1nyt_A 148 TNRTVS 153 (271)
T ss_dssp ECSSHH
T ss_pred EECCHH
Confidence 999854
No 23
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.8e-40 Score=321.70 Aligned_cols=161 Identities=34% Similarity=0.513 Sum_probs=143.9
Q ss_pred hhhhccccccceEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHc
Q 015614 228 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305 (403)
Q Consensus 228 ~~~~~~~~~~~~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~ 305 (403)
-|++..++..+++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.+++.+|.|+|||||||+++++
T Consensus 13 ~~~~~~~~~~t~~~~viG~pi~hS~Sp~~hn~~~~~~Gl~~~Y~~~~~~~~~l~~~v~~l~~~~~~G~nVTiP~K~~i~~ 92 (297)
T 2egg_A 13 GENLYFQGHMEKVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRALGIAGVNVTIPHKLAVIP 92 (297)
T ss_dssp -------CCCCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCTTCHHHHHHHHHHHTCCEEEECTTCTTTTGG
T ss_pred cccceecCCceeEEEEECCCcccccCHHHHHHHHHHcCcCcEEEEEEcCHHHHHHHHHHHhhCCCCeEEECCcCHHHHHH
Confidence 366778888899999999999999999999999999999999999987 589999999988899999999999999999
Q ss_pred ccccCCHHHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHH
Q 015614 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385 (403)
Q Consensus 306 ~~d~~~~~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~ 385 (403)
++|++++.|+.+||||||+++ +|+|+|+||||.||..+|++.. ...+++++++|+|+||+||++++
T Consensus 93 ~ld~~~~~A~~iGavNti~~~--~g~l~g~nTd~~G~~~~l~~~~------------~~~l~~~~vlVlGaGg~g~aia~ 158 (297)
T 2egg_A 93 FLDEVDEHARRIGAVNTIINN--DGRLVGYNTDGLGYVQALEEEM------------NITLDGKRILVIGAGGGARGIYF 158 (297)
T ss_dssp GCSEECHHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHHT------------TCCCTTCEEEEECCSHHHHHHHH
T ss_pred HHHHHhHHHHHhCCCCeEECc--CCeEeeccCCHHHHHHHHHHhC------------CCCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999987 8999999999999999997641 02457899999999999999999
Q ss_pred HHHHCCC-eEEEEecCCC
Q 015614 386 GAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 386 al~~~g~-~i~v~nR~~~ 402 (403)
+|.+.|+ +|+|+||+.+
T Consensus 159 ~L~~~G~~~V~v~nR~~~ 176 (297)
T 2egg_A 159 SLLSTAAERIDMANRTVE 176 (297)
T ss_dssp HHHTTTCSEEEEECSSHH
T ss_pred HHHHCCCCEEEEEeCCHH
Confidence 9999999 9999999864
No 24
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=100.00 E-value=8.9e-39 Score=309.45 Aligned_cols=153 Identities=42% Similarity=0.614 Sum_probs=142.1
Q ss_pred ccccceEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccCC
Q 015614 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311 (403)
Q Consensus 234 ~~~~~~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~ 311 (403)
++..+++|||||+||+||+||.|||++|+++|+|+.|.++++ +++.++++.++..+|.|+|||||||+++++++|+++
T Consensus 7 ~~~~~~~~~viG~pi~hS~Sp~~h~~~~~~~gi~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nVtiP~k~~i~~~~d~~~ 86 (287)
T 1nvt_A 7 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 86 (287)
T ss_dssp CCTTCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCGGGGGGHHHHHHHHTCCEEEECTTSTTGGGGGCSEEC
T ss_pred hcCCccEEEEECCCcccccCHHHHHHHHHHcCCCcEEEEEEcCHHHHHHHHHHHHhCCCCEEEEccCCHHHHHHHHHhcC
Confidence 455678999999999999999999999999999999999987 689999999987799999999999999999999999
Q ss_pred HHHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCC
Q 015614 312 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391 (403)
Q Consensus 312 ~~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g 391 (403)
+.|+.+|||||++++ +|+|+||||||.||+.+|++.. ..+++++++|+|+||+||+++++|.+.|
T Consensus 87 ~~a~~igavnt~~~~--~g~l~g~nTd~~G~~~~L~~~~-------------~~l~~k~vlV~GaGgiG~aia~~L~~~G 151 (287)
T 1nvt_A 87 KDAQLIGAVNTIKIE--DGKAIGYNTDGIGARMALEEEI-------------GRVKDKNIVIYGAGGAARAVAFELAKDN 151 (287)
T ss_dssp HHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHHH-------------CCCCSCEEEEECCSHHHHHHHHHHTSSS
T ss_pred HHHHHhCceeeEEee--CCEEEEecCCHHHHHHHHHHhC-------------CCcCCCEEEEECchHHHHHHHHHHHHCC
Confidence 999999999999987 8999999999999999997642 3467899999999999999999999999
Q ss_pred CeEEEEecCCC
Q 015614 392 ARVVIFDIDFG 402 (403)
Q Consensus 392 ~~i~v~nR~~~ 402 (403)
+|+++||+.+
T Consensus 152 -~V~v~~r~~~ 161 (287)
T 1nvt_A 152 -NIIIANRTVE 161 (287)
T ss_dssp -EEEEECSSHH
T ss_pred -CEEEEECCHH
Confidence 9999999854
No 25
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=100.00 E-value=1.3e-37 Score=299.47 Aligned_cols=155 Identities=32% Similarity=0.557 Sum_probs=143.6
Q ss_pred cccccceEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccC
Q 015614 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310 (403)
Q Consensus 233 ~~~~~~~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~ 310 (403)
.++.+|++|||+|+|++||+||.|||++|+++|+++.|.++++ +++.++++.++.++|.|+|||+|||+++++++|++
T Consensus 7 ~~~~~t~~~~liG~pi~hs~sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nvtiP~k~~i~~~ld~l 86 (275)
T 2hk9_A 7 MINAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYV 86 (275)
T ss_dssp CCCTTCEEEEEEESSCTTCSHHHHHHHHHHHHTCSEEEEEEECCGGGHHHHHHHHHHHTCCEEEECTTSTTTTGGGCSEE
T ss_pred cccCCceEEEEECCCcccccCHHHHHHHHHHcCCCcEEEEEECCHHHHHHHHHHHHhCCCCEEEECccCHHHHHHHHHHh
Confidence 4567789999999999999999999999999999999999987 58999999998889999999999999999999999
Q ss_pred CHHHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHC
Q 015614 311 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR 390 (403)
Q Consensus 311 ~~~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~ 390 (403)
++.|+.+||||||+++ +|+|.|+|||+.||+.+|++. + ..+++++++|+|+|++|++++++|.+.
T Consensus 87 ~~~A~~~gavnti~~~--~g~~~g~nTd~~G~~~~l~~~----~---------~~~~~~~v~iiGaG~~g~aia~~L~~~ 151 (275)
T 2hk9_A 87 EDTAKEIGAVNTVKFE--NGKAYGYNTDWIGFLKSLKSL----I---------PEVKEKSILVLGAGGASRAVIYALVKE 151 (275)
T ss_dssp CHHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHH----C---------TTGGGSEEEEECCSHHHHHHHHHHHHH
T ss_pred hHHHHHhCCcceEEee--CCEEEeecCCHHHHHHHHHHh----C---------CCcCCCEEEEECchHHHHHHHHHHHHc
Confidence 9999999999999987 899999999999999999763 1 345688999999999999999999999
Q ss_pred CCeEEEEecCCC
Q 015614 391 GARVVIFDIDFG 402 (403)
Q Consensus 391 g~~i~v~nR~~~ 402 (403)
|++|+++||+.+
T Consensus 152 g~~V~v~~r~~~ 163 (275)
T 2hk9_A 152 GAKVFLWNRTKE 163 (275)
T ss_dssp TCEEEEECSSHH
T ss_pred CCEEEEEECCHH
Confidence 999999999854
No 26
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=100.00 E-value=3.9e-34 Score=273.27 Aligned_cols=148 Identities=33% Similarity=0.558 Sum_probs=136.2
Q ss_pred ceEEeeeccCCcccCCHHHHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCceEEecccchHHHHcccccCCHHHh
Q 015614 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315 (403)
Q Consensus 238 ~~~~~liG~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~ 315 (403)
+++|||||+||+||+||.|||++|+++|+++.|.++++ +++.++++.++.. +.|+|||+|||+++++++|++++.|+
T Consensus 1 ~~~~~~~G~pi~hs~sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~-~~G~~vt~P~k~~i~~~~~~l~~~a~ 79 (263)
T 2d5c_A 1 MLRFAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-FRGVNLTLPLKEAALAHLDWVSPEAQ 79 (263)
T ss_dssp CEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCGGGHHHHHHHHHHH-CSEEEECTTCTTGGGGGCSEECHHHH
T ss_pred CeEEEEECCCcccccCHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHhcccc-CceEEEcccCHHHHHHHHHHHhHHHH
Confidence 36899999999999999999999999999999999976 5788999888766 99999999999999999999999999
Q ss_pred hccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEE
Q 015614 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395 (403)
Q Consensus 316 ~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~ 395 (403)
.+|++||++++ +|++.|+|||+.||+.+|++. +..+++ +++|+|+|++|++++.+|.+.|++|+
T Consensus 80 ~~gavn~i~~~--~g~~~g~ntd~~g~~~~l~~~-------------~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~ 143 (263)
T 2d5c_A 80 RIGAVNTVLQV--EGRLFGFNTDAPGFLEALKAG-------------GIPLKG-PALVLGAGGAGRAVAFALREAGLEVW 143 (263)
T ss_dssp HHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHT-------------TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred HhCCCCcEEcc--CCeEEEeCCCHHHHHHHHHHh-------------CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEE
Confidence 99999999986 899999999999999998753 135678 99999999999999999999999999
Q ss_pred EEecCCC
Q 015614 396 IFDIDFG 402 (403)
Q Consensus 396 v~nR~~~ 402 (403)
++||+.+
T Consensus 144 v~~r~~~ 150 (263)
T 2d5c_A 144 VWNRTPQ 150 (263)
T ss_dssp EECSSHH
T ss_pred EEECCHH
Confidence 9999853
No 27
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=99.91 E-value=4.3e-26 Score=220.13 Aligned_cols=141 Identities=16% Similarity=0.078 Sum_probs=120.1
Q ss_pred cCCcccCCHHHHHHHHH-----hcCCCceEeecCc--ccHHHHHHHh-cCCCCceEEecccchH-HHHcccccCCHHHhh
Q 015614 246 KPVGHSKGPILHNPTFR-----HVNYNGIYVPMFV--DDLKKFFSTY-SSPDFAGFSVGFPYKE-AVMKFCDEVHPLAQA 316 (403)
Q Consensus 246 ~pi~hS~SP~ihn~~~~-----~~gl~~~y~~~~~--~~~~~~~~~~-~~~~~~G~~VT~P~K~-~v~~~~d~~~~~A~~ 316 (403)
+||.||+||.|||.+|+ .+|+++.|.++++ ++++++++.+ ...+..|+|||.|||. ..+..++++.+.+++
T Consensus 2 ~~i~hs~sp~~h~~~~~~~~~~~~g~~~~y~~~~v~~~~~~~~~~~~~~~~~~~g~~~t~~~~~G~~~~~~~~~~~~~~~ 81 (287)
T 1lu9_A 2 KKLLFQFDTDATPSVFDVVVGYDGGADHITGYGNVTPDNVGAYVDGTIYTRGGKEKQSTAIFVGGGDMAAGERVFEAVKK 81 (287)
T ss_dssp CCEEEEEESSSSCCHHHHHHHHHTTCSEEEEESSCCTTTHHHHHHHHHSSCCGGGGGGEEEEEECSCHHHHHHHHHHHHH
T ss_pred CceEEEccCCCCCCchhhheeeccCcceEeccCCcCHHHHHhhhcceEEecCccccccceEEEccchHHHHHHHHHHHHH
Confidence 69999999999999999 5999999999988 6899999985 6778999999999976 445566666666654
Q ss_pred --ccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEc-chhHHHHHHHHHHHCCCe
Q 015614 317 --IAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG-AGGAGRALAFGAKSRGAR 393 (403)
Q Consensus 317 --igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilG-aGGaarai~~al~~~g~~ 393 (403)
+||+||++.. + +.|+|||+.||+.+|++.+. ..+++++++|+| +||+|++++++|.+.|++
T Consensus 82 ~~~gavnt~~~~--~--~~G~nTd~~g~~~~l~~~~~------------~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~ 145 (287)
T 1lu9_A 82 RFFGPFRVSCML--D--SNGSNTTAAAGVALVVKAAG------------GSVKGKKAVVLAGTGPVGMRSAALLAGEGAE 145 (287)
T ss_dssp HCBTTBCCEEEE--C--STTHHHHHHHHHHHHHHHTT------------SCCTTCEEEEETCSSHHHHHHHHHHHHTTCE
T ss_pred hcCCCeEEEEec--C--CCcCCchHHHHHHHHHHhhc------------cCCCCCEEEEECCCcHHHHHHHHHHHHCcCE
Confidence 5999999876 4 47999999999999876411 235689999999 899999999999999999
Q ss_pred EEEEecCCC
Q 015614 394 VVIFDIDFG 402 (403)
Q Consensus 394 i~v~nR~~~ 402 (403)
|++++|+.+
T Consensus 146 V~i~~R~~~ 154 (287)
T 1lu9_A 146 VVLCGRKLD 154 (287)
T ss_dssp EEEEESSHH
T ss_pred EEEEECCHH
Confidence 999999853
No 28
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=99.90 E-value=2.6e-25 Score=225.39 Aligned_cols=139 Identities=14% Similarity=0.231 Sum_probs=120.7
Q ss_pred ccccceEEe--eeccCCcccCCHHHHHHH--HHhc-CCCceEeecCcc---cHHHHHHHhcCCCCceEEe---cccchHH
Q 015614 234 INADTKVFG--LISKPVGHSKGPILHNPT--FRHV-NYNGIYVPMFVD---DLKKFFSTYSSPDFAGFSV---GFPYKEA 302 (403)
Q Consensus 234 ~~~~~~~~~--liG~pi~hS~SP~ihn~~--~~~~-gl~~~y~~~~~~---~~~~~~~~~~~~~~~G~~V---T~P~K~~ 302 (403)
++..++++| ++|. ||.||.|||++ |+++ |+|+.|..++++ ++.++++.++ ++|.|+|| |+|||+.
T Consensus 69 vtdgt~ilGlG~iG~---hS~sPvmh~ka~lf~~~gGid~~yi~ldv~d~de~~~~v~~l~-~~f~GinvED~T~P~k~~ 144 (439)
T 2dvm_A 69 VSDGSRILGLGNIGP---LAGLPVMEGKALLFKRFGGVDAFPIMIKEQEPNKFIDIVKAIA-PTFGGINLEDIASPKCFY 144 (439)
T ss_dssp EECSTTBTTTBCCCH---HHHHHHHHHHHHHHHHHHCCEEEEEECSCCSHHHHHHHHHHTG-GGCSEEEECSCCTTHHHH
T ss_pred EECCCeEecccceec---cccCHHHHHHHHHHHHhCCCCCeeeeeecCCHHHHHHHHHHhC-ccCcEEEEEeCCCchHHH
Confidence 333467777 8997 99999999966 9999 899999999983 5666666666 89999999 9999999
Q ss_pred HHcccccCCHHHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHH
Q 015614 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRA 382 (403)
Q Consensus 303 v~~~~d~~~~~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaara 382 (403)
+++++|+ +|||+++. +|+++.| |||+.||+++|+.. . ..+++++++|+||||||++
T Consensus 145 il~~l~~---------avNt~vf~-dD~~gtg-ntd~aG~~~AL~~~-g------------~~l~~~rvlvlGAGgAg~a 200 (439)
T 2dvm_A 145 ILERLRE---------ELDIPVFH-DDQQGTA-AVVLAGLLNALKVV-G------------KKISEITLALFGAGAAGFA 200 (439)
T ss_dssp HHHHHHH---------HCSSCEEE-HHHHHHH-HHHHHHHHHHHHHH-T------------CCTTTCCEEEECCSHHHHH
T ss_pred HHHHHHH---------hcCEEEEe-CCCcEEe-ehHHHHHHHHHHHh-C------------CCccCCEEEEECccHHHHH
Confidence 9999986 89999996 2788999 99999999999753 1 3467889999999999999
Q ss_pred HHHHHHHCCC---eEEEEe----cC
Q 015614 383 LAFGAKSRGA---RVVIFD----ID 400 (403)
Q Consensus 383 i~~al~~~g~---~i~v~n----R~ 400 (403)
+++.|.++|+ +|+|+| |+
T Consensus 201 ia~~L~~~G~~~~~I~vvd~~~~R~ 225 (439)
T 2dvm_A 201 TLRILTEAGVKPENVRVVELVNGKP 225 (439)
T ss_dssp HHHHHHHTTCCGGGEEEEEEETTEE
T ss_pred HHHHHHHcCCCcCeEEEEEccCCCc
Confidence 9999999998 799999 97
No 29
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=99.44 E-value=1.2e-15 Score=151.91 Aligned_cols=126 Identities=17% Similarity=0.183 Sum_probs=103.6
Q ss_pred CcccCCHHHHHHHHHhcCC-CceEeecCcccHHHHHHHhcCCCCceEEe-cccchHHHHcccccCCHHHhhc----ccee
Q 015614 248 VGHSKGPILHNPTFRHVNY-NGIYVPMFVDDLKKFFSTYSSPDFAGFSV-GFPYKEAVMKFCDEVHPLAQAI----AAVN 321 (403)
Q Consensus 248 i~hS~SP~ihn~~~~~~gl-~~~y~~~~~~~~~~~~~~~~~~~~~G~~V-T~P~K~~v~~~~d~~~~~A~~i----gavN 321 (403)
|-+++||.+||..|.+.|+ ++.|..+.++ +++++.++..++.|+|+ |+|||+.+++++|.+++.|..+ ||+|
T Consensus 70 i~~vksP~~~~~~~~~~g~~~~~y~~~~~~--~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA~n 147 (361)
T 1pjc_A 70 VVKVKEPLPAEYDLMQKDQLLFTYLHLAAA--RELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARF 147 (361)
T ss_dssp EECSSCCCGGGGGGCCTTCEEEECCCGGGC--HHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHhhcCCCEEEEEeccccC--HHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHHHH
Confidence 3478899999999999997 8889988775 24566666678999999 9999999999999999999999 9999
Q ss_pred EEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 322 TIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 322 Ti~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
|+.+. +|+ |+.. .. +. .+++++++|+|+||+|++++..++.+|++|++++|++
T Consensus 148 t~~~~--~g~--G~~l------~~----l~-------------~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 148 LERQQ--GGR--GVLL------GG----VP-------------GVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp TSGGG--TSC--CCCT------TC----BT-------------TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred Hhhcc--CCC--ceec------cC----CC-------------CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 99875 554 3321 11 11 1345899999999999999999999999999999985
Q ss_pred C
Q 015614 402 G 402 (403)
Q Consensus 402 ~ 402 (403)
+
T Consensus 201 ~ 201 (361)
T 1pjc_A 201 E 201 (361)
T ss_dssp H
T ss_pred H
Confidence 4
No 30
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.67 E-value=1.1e-08 Score=97.56 Aligned_cols=141 Identities=11% Similarity=0.101 Sum_probs=105.5
Q ss_pred eec-cCCcccCCHHHHHHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCceEEecccch-----HHHHcccccCC
Q 015614 243 LIS-KPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYK-----EAVMKFCDEVH 311 (403)
Q Consensus 243 liG-~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~~d~~~ 311 (403)
++| +|-+++.-- .-...++++|++..+..++. +++.+.++.+ .++++.|+.|.+|++ +.++..+|. +
T Consensus 41 lvg~dpaS~~Yv~-~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p-~ 118 (285)
T 3l07_A 41 IVGNDPASKTYVA-SKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKP-E 118 (285)
T ss_dssp EESCCHHHHHHHH-HHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCG-G
T ss_pred EECCCHHHHHHHH-HHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCc-c
Confidence 446 343333222 33456789999999888853 3677777777 457899999999997 777777765 5
Q ss_pred HHHhhccceeEEEEeccCCe-EEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchh-HHHHHHHHHHH
Q 015614 312 PLAQAIAAVNTIIRRPSDGK-LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGAKS 389 (403)
Q Consensus 312 ~~A~~igavNTi~~~~~~g~-l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGG-aarai~~al~~ 389 (403)
..+.-+..+|+-... .|. -...+++-.|++..|++. +.+++|++++|+|+|+ +|+.++..|..
T Consensus 119 KDVDG~~~~N~G~l~--~g~~~~~~PcTp~gv~~lL~~~-------------~i~l~Gk~vvVIG~s~iVG~p~A~lL~~ 183 (285)
T 3l07_A 119 KDVDGFHPTNVGRLQ--LRDKKCLESCTPKGIMTMLREY-------------GIKTEGAYAVVVGASNVVGKPVSQLLLN 183 (285)
T ss_dssp GBTTCCSHHHHHHHH--HTCTTCCCCHHHHHHHHHHHHT-------------TCCCTTCEEEEECCCTTTHHHHHHHHHH
T ss_pred cccccCChhheeehh--cCCCCCCCCCCHHHHHHHHHHh-------------CCCCCCCEEEEECCCchhHHHHHHHHHH
Confidence 566667778875432 122 345789999999998764 2568899999999999 69999999999
Q ss_pred CCCeEEEEecC
Q 015614 390 RGARVVIFDID 400 (403)
Q Consensus 390 ~g~~i~v~nR~ 400 (403)
.|+.|++++|+
T Consensus 184 ~gAtVtv~hs~ 194 (285)
T 3l07_A 184 AKATVTTCHRF 194 (285)
T ss_dssp TTCEEEEECTT
T ss_pred CCCeEEEEeCC
Confidence 99999999874
No 31
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.63 E-value=2.3e-08 Score=95.52 Aligned_cols=142 Identities=15% Similarity=0.181 Sum_probs=103.0
Q ss_pred eeec-cCCcccCCHHHHHHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCceEEecccch-----HHHHcccccC
Q 015614 242 GLIS-KPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYK-----EAVMKFCDEV 310 (403)
Q Consensus 242 ~liG-~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~~d~~ 310 (403)
-++| +|-+++.-- .-...++++|++..+..++. +++.+.++.+ .++++.|+.|.+|++ +.++..++.
T Consensus 39 ilvg~dpaS~~Yv~-~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p- 116 (285)
T 3p2o_A 39 ILVGDNPASQTYVK-SKAKACEECGIKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIIS- 116 (285)
T ss_dssp EEESCCHHHHHHHH-HHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCG-
T ss_pred EEeCCCHHHHHHHH-HHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCc-
Confidence 3456 343333222 23456789999999888863 3677777777 467899999999997 566666654
Q ss_pred CHHHhhccceeEEEEeccCCeEEE-EeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchh-HHHHHHHHHH
Q 015614 311 HPLAQAIAAVNTIIRRPSDGKLIG-YNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGAK 388 (403)
Q Consensus 311 ~~~A~~igavNTi~~~~~~g~l~G-~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGG-aarai~~al~ 388 (403)
+..+.-+..+|+-..- .|...| .+++-.|++..|++. +.+++||+++|+|+|+ +||.++..|.
T Consensus 117 ~KDVDg~~~~N~g~l~--~g~~~g~~PcTp~gv~~lL~~~-------------~i~l~Gk~vvVvGrs~iVG~p~A~lL~ 181 (285)
T 3p2o_A 117 SKDVDGFHPINVGYLN--LGLESGFLPCTPLGVMKLLKAY-------------EIDLEGKDAVIIGASNIVGRPMATMLL 181 (285)
T ss_dssp GGCTTCCSHHHHHHHH--TTCCSSCCCHHHHHHHHHHHHT-------------TCCCTTCEEEEECCCTTTHHHHHHHHH
T ss_pred ccccccCCHhhhhhhh--cCCCCCCCCCCHHHHHHHHHHh-------------CCCCCCCEEEEECCCchHHHHHHHHHH
Confidence 4445556667764322 222332 789999999998764 2568899999999998 6999999999
Q ss_pred HCCCeEEEEecC
Q 015614 389 SRGARVVIFDID 400 (403)
Q Consensus 389 ~~g~~i~v~nR~ 400 (403)
..|+.|++++|+
T Consensus 182 ~~gAtVtv~h~~ 193 (285)
T 3p2o_A 182 NAGATVSVCHIK 193 (285)
T ss_dssp HTTCEEEEECTT
T ss_pred HCCCeEEEEeCC
Confidence 999999999875
No 32
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.60 E-value=2.9e-08 Score=94.72 Aligned_cols=142 Identities=16% Similarity=0.168 Sum_probs=104.1
Q ss_pred eeec-cCCcccCCHHHHHHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCceEEecccchH-----HHHcccccC
Q 015614 242 GLIS-KPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYKE-----AVMKFCDEV 310 (403)
Q Consensus 242 ~liG-~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~-----~v~~~~d~~ 310 (403)
-++| +|-+++.-- .-...++++|++..+..++. +++.+.++.+ .++++.|+.|.+|++. .++..++.
T Consensus 41 ilvg~dpaS~~Yv~-~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p- 118 (286)
T 4a5o_A 41 ILVGTDPASQVYVA-HKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHP- 118 (286)
T ss_dssp EEESCCHHHHHHHH-HHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCG-
T ss_pred EEeCCCHHHHHHHH-HHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCc-
Confidence 3456 444443222 23456789999999888853 3677777777 4578999999999977 66666654
Q ss_pred CHHHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchh-HHHHHHHHHHH
Q 015614 311 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGAKS 389 (403)
Q Consensus 311 ~~~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGG-aarai~~al~~ 389 (403)
+..+.-+..+|+-..- .|.-...+++-.|++..|++. +.+++||+++|+|+|+ +||.++..|..
T Consensus 119 ~KDVDG~~~~N~g~l~--~g~~~~~PcTp~gv~~lL~~~-------------~i~l~Gk~vvVvGrs~iVG~plA~lL~~ 183 (286)
T 4a5o_A 119 DKDVDGFHPYNIGRLA--QRMPLLRPCTPKGIMTLLAST-------------GADLYGMDAVVVGASNIVGRPMALELLL 183 (286)
T ss_dssp GGCTTCCSHHHHHHHH--TTCCSSCCHHHHHHHHHHHHT-------------TCCCTTCEEEEECTTSTTHHHHHHHHHH
T ss_pred ccccccCChhhhHHHh--cCCCCCCCCCHHHHHHHHHHh-------------CCCCCCCEEEEECCCchhHHHHHHHHHH
Confidence 4556666777764322 223345799999999998764 2568899999999998 79999999999
Q ss_pred CCCeEEEEecC
Q 015614 390 RGARVVIFDID 400 (403)
Q Consensus 390 ~g~~i~v~nR~ 400 (403)
.|+.|++++|.
T Consensus 184 ~gAtVtv~hs~ 194 (286)
T 4a5o_A 184 GGCTVTVTHRF 194 (286)
T ss_dssp TTCEEEEECTT
T ss_pred CCCeEEEEeCC
Confidence 99999999873
No 33
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.56 E-value=5.9e-08 Score=93.30 Aligned_cols=142 Identities=18% Similarity=0.183 Sum_probs=104.1
Q ss_pred eeec-cCCcccCCHHHHHHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCceEEecccch-----HHHHcccccC
Q 015614 242 GLIS-KPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYK-----EAVMKFCDEV 310 (403)
Q Consensus 242 ~liG-~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~~d~~ 310 (403)
-++| +|-+++.-- .-...++++|++..+..++. +++.+.++.+ .++++.|+.|.+|++ +.++..++.
T Consensus 43 ilvg~dpaS~~Yv~-~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p- 120 (300)
T 4a26_A 43 IIVGQRMDSKKYVQ-LKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHP- 120 (300)
T ss_dssp EEESCCHHHHHHHH-HHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCG-
T ss_pred EEeCCCHHHHHHHH-HHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCc-
Confidence 3556 444343322 23356789999999888743 3677777777 457899999999998 677777765
Q ss_pred CHHHhhccceeEEEEeccCC-eEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchh-HHHHHHHHHH
Q 015614 311 HPLAQAIAAVNTIIRRPSDG-KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGAK 388 (403)
Q Consensus 311 ~~~A~~igavNTi~~~~~~g-~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGG-aarai~~al~ 388 (403)
+..+.-+..+|+-..-. ++ .-.-.+++-.|++..|++. +.+++|++++|+|+|+ +|+.++..|.
T Consensus 121 ~KDVDG~~~~N~G~l~~-g~~~~~~~PcTp~gv~~lL~~~-------------~i~l~Gk~vvVIG~s~iVG~p~A~lL~ 186 (300)
T 4a26_A 121 HKDADALLPVNVGLLHY-KGREPPFTPCTAKGVIVLLKRC-------------GIEMAGKRAVVLGRSNIVGAPVAALLM 186 (300)
T ss_dssp GGCTTCCSHHHHHHHHC-TTCCCSCCCHHHHHHHHHHHHH-------------TCCCTTCEEEEECCCTTTHHHHHHHHH
T ss_pred ccccccCCcceEEEeec-CCCcCCCCCCCHHHHHHHHHHc-------------CCCCCCCEEEEECCCchHHHHHHHHHH
Confidence 55566677777753221 11 1123789999999998875 2568899999999999 7999999999
Q ss_pred HCCCeEEEEec
Q 015614 389 SRGARVVIFDI 399 (403)
Q Consensus 389 ~~g~~i~v~nR 399 (403)
..|+.|++++|
T Consensus 187 ~~gAtVtv~~~ 197 (300)
T 4a26_A 187 KENATVTIVHS 197 (300)
T ss_dssp HTTCEEEEECT
T ss_pred HCCCeEEEEeC
Confidence 99999999997
No 34
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=97.81 E-value=1e-05 Score=84.45 Aligned_cols=65 Identities=18% Similarity=0.235 Sum_probs=51.2
Q ss_pred cCCeEEEEeccHHHHHHHHHHH-------H--------HhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCC
Q 015614 328 SDGKLIGYNTDCEASITAIEDA-------I--------KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392 (403)
Q Consensus 328 ~~g~l~G~NTD~~G~~~~l~~~-------~--------~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~ 392 (403)
.+|++.|+|||+.|++..++-. + ++.+ ...+++++|+|+|+||.|.+++..|+..|+
T Consensus 280 ~~Gkl~g~~tD~~g~l~~~~la~~~~~lnL~lmrwrll~~~g--------q~kL~~~kVLIVGaGGLGs~va~~La~aGV 351 (598)
T 3vh1_A 280 VQGKLAPRVVDLSSLLDPLKIADQSVDLNLKLMKWRILPDLN--------LDIIKNTKVLLLGAGTLGCYVSRALIAWGV 351 (598)
T ss_dssp TTSSSSCEEEECHHHHCHHHHHHHHHHHHHHHHHHHHCTTCC--------HHHHHTCEEEEECCSHHHHHHHHHHHTTTC
T ss_pred CCCCCcceeecchhccCHHHHHHHHHhhhhhhhhhhccchhh--------HHHHhCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 3799999999999999988611 0 1000 012457899999999999999999999999
Q ss_pred -eEEEEecC
Q 015614 393 -RVVIFDID 400 (403)
Q Consensus 393 -~i~v~nR~ 400 (403)
+|+|++.+
T Consensus 352 G~ItLvD~D 360 (598)
T 3vh1_A 352 RKITFVDNG 360 (598)
T ss_dssp CEEEEECCS
T ss_pred CEEEEECCC
Confidence 99999654
No 35
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.10 E-value=9.1e-05 Score=72.94 Aligned_cols=59 Identities=19% Similarity=0.191 Sum_probs=47.8
Q ss_pred CCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHH-CCC-eEEEEecCCC
Q 015614 329 DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGA-RVVIFDIDFG 402 (403)
Q Consensus 329 ~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~-~g~-~i~v~nR~~~ 402 (403)
++.|.|+|||..|++.+.. +. ....+++.|||+|+.|++.+.+|.. .+. +|+|+||+++
T Consensus 105 ~~~lT~~RTaa~s~laa~~--la-------------~~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~ 165 (350)
T 1x7d_A 105 LTIATALRTAATSLMAAQA--LA-------------RPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPL 165 (350)
T ss_dssp CHHHHHHHHHHHHHHHHHH--HS-------------CTTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHH
T ss_pred CCEEEeehhhHHHHHHHHH--hc-------------cccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHH
Confidence 5568899999999999862 32 1246799999999999999998754 566 8999999864
No 36
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.04 E-value=0.0073 Score=54.48 Aligned_cols=122 Identities=17% Similarity=0.196 Sum_probs=77.7
Q ss_pred CeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHH
Q 015614 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLE 89 (403)
Q Consensus 10 ~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (403)
...|+.+|...+.+++...++.+.+.|+|+||+|.-.. +..+.+..+++..+.|+++-. |+.. +. +
T Consensus 6 ~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~---~~~~~i~~i~~~~~~~l~vg~-----g~~~--~~-~--- 71 (212)
T 2v82_A 6 KLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSP---QWEQSIPAIVDAYGDKALIGA-----GTVL--KP-E--- 71 (212)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTST---THHHHHHHHHHHHTTTSEEEE-----ECCC--SH-H---
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCCh---hHHHHHHHHHHhCCCCeEEEe-----cccc--CH-H---
Confidence 45678899999999999999998889999999985421 112455556555677877621 2221 22 2
Q ss_pred HHHHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 90 ALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 90 ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
.++.+++.|+++|=+.-. ..+..+.. +..+.+++.+.|+ .+++ .++.+.|+|++++
T Consensus 72 ~i~~a~~~Gad~V~~~~~-~~~~~~~~---~~~g~~~~~g~~t------~~e~----~~a~~~G~d~v~v 127 (212)
T 2v82_A 72 QVDALARMGCQLIVTPNI-HSEVIRRA---VGYGMTVCPGCAT------ATEA----FTALEAGAQALKI 127 (212)
T ss_dssp HHHHHHHTTCCEEECSSC-CHHHHHHH---HHTTCEEECEECS------HHHH----HHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEeCCC-CHHHHHHH---HHcCCCEEeecCC------HHHH----HHHHHCCCCEEEE
Confidence 356788899999864331 12222222 2235667766553 2343 3456789999996
No 37
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=96.98 E-value=0.00015 Score=70.47 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=47.6
Q ss_pred CCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHH-CCC-eEEEEecCCC
Q 015614 329 DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGA-RVVIFDIDFG 402 (403)
Q Consensus 329 ~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~-~g~-~i~v~nR~~~ 402 (403)
++.+.++|||..|.+.+. .+. ....++++|+|+|+.|++.+.+|.+ .+. +|+|+||+++
T Consensus 101 ~~~lt~~RTaa~s~laa~--~la-------------~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~ 161 (322)
T 1omo_A 101 ATYTTSLRTGAAGGIAAK--YLA-------------RKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREK 161 (322)
T ss_dssp CHHHHHHHHHHHHHHHHH--HHS-------------CTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHH
T ss_pred CchHHHHHHHHHHHHHHH--hcc-------------CCCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHH
Confidence 445788999999998875 232 1246799999999999999999987 456 8999999865
No 38
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=96.91 E-value=7.9e-05 Score=75.46 Aligned_cols=68 Identities=21% Similarity=0.249 Sum_probs=51.8
Q ss_pred HHhhccceeEEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCC
Q 015614 313 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392 (403)
Q Consensus 313 ~A~~igavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~ 392 (403)
...++|++|||+.+ +|++.| .||...++..-. .+++++|+|+|+||.|..++..|+..|+
T Consensus 5 ~~~r~~~vntl~~~--~g~~~g-----~gf~~g~e~~~~-------------~L~~~~VlvvG~GGlGs~va~~La~aGv 64 (434)
T 1tt5_B 5 WEGRWNHVKKFLER--SGPFTH-----PDFEPSTESLQF-------------LLDTCKVLVIGAGGLGCELLKNLALSGF 64 (434)
T ss_dssp CTTTTHHHHHHHHS--CCSSCC-----TTCCCCSSHHHH-------------HHHTCCEEEECSSTHHHHHHHHHHHTTC
T ss_pred hhhhhccceEEEcC--CCcccc-----cccccCHHHHHH-------------HhcCCEEEEECcCHHHHHHHHHHHHcCC
Confidence 34678999999976 888876 566554332110 1235789999999999999999999999
Q ss_pred -eEEEEecC
Q 015614 393 -RVVIFDID 400 (403)
Q Consensus 393 -~i~v~nR~ 400 (403)
+|+|++.+
T Consensus 65 g~i~ivD~D 73 (434)
T 1tt5_B 65 RQIHVIDMD 73 (434)
T ss_dssp CCEEEEECC
T ss_pred CEEEEEcCC
Confidence 99999653
No 39
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=96.88 E-value=0.00016 Score=69.86 Aligned_cols=59 Identities=15% Similarity=0.138 Sum_probs=48.2
Q ss_pred CCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHC-CC-eEEEEecCCC
Q 015614 329 DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR-GA-RVVIFDIDFG 402 (403)
Q Consensus 329 ~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~-g~-~i~v~nR~~~ 402 (403)
++.|.|+|||..|++.+. .+. ....+++.|||+|++|++++.+|.+. |. +|+++||+++
T Consensus 111 ~~~lt~~rT~a~~~la~~--~la-------------~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~ 171 (312)
T 2i99_A 111 GNVITAKRTAAVSAIATK--FLK-------------PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKE 171 (312)
T ss_dssp CHHHHHHHHHHHHHHHHH--HHS-------------CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHH
T ss_pred chhHHHHHHHHHHHHHHH--HhC-------------CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHH
Confidence 456888999999999882 332 12467899999999999999999876 88 8999999864
No 40
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.54 E-value=0.0038 Score=59.09 Aligned_cols=130 Identities=15% Similarity=0.199 Sum_probs=79.2
Q ss_pred eec-cCCcccCCHHHHHHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCceEEecccchHHHHcccccCCHHHhh
Q 015614 243 LIS-KPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316 (403)
Q Consensus 243 liG-~pi~hS~SP~ihn~~~~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~ 316 (403)
++| +|-+++.--.- ....+++|+ .....++. +++.+.++.+ .++.+.|+-|-.|.-.. +| + -+.
T Consensus 34 lvg~dpaS~~Yv~~k-~k~~~~~Gi-~~~~~lp~~~s~~ell~~I~~lN~D~~v~GIlvqlPLP~~----id---~-~~v 103 (276)
T 3ngx_A 34 QIGDNEAASIYARAK-IRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAKDPQINGIMIENPLPKG----FD---Y-YEI 103 (276)
T ss_dssp EESCCHHHHHHHHHH-HHHHHHHTC-EEEEEEESSCCHHHHHHHHHHHHHCTTCCEEEECSCCCTT----CC---H-HHH
T ss_pred EeCCCHHHHHHHHHH-HHHHHHCCe-EEEEECCCCCCHHHHHHHHHHHcCCCCCcEEEEeCCCCCC----CC---H-HHH
Confidence 456 44444333223 345688999 66554432 3566666666 56889999999996421 11 1 111
Q ss_pred ccceeEEEEeccCCeEEEEe-------------ccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchh-HHHH
Q 015614 317 IAAVNTIIRRPSDGKLIGYN-------------TDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRA 382 (403)
Q Consensus 317 igavNTi~~~~~~g~l~G~N-------------TD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGG-aara 382 (403)
+.+++-- ++ =|| ++-+| .--.|++..|++. + ++|++++|+|+|+ +++.
T Consensus 104 ~~~I~p~-KD-VDG-~~p~n~G~l~~g~~~~~PcTp~gv~~lL~~~-------------~--l~Gk~vvVvG~s~iVG~p 165 (276)
T 3ngx_A 104 VRNIPYY-KD-VDA-LSPYNQGLIALNREFLVPATPRAVIDIMDYY-------------G--YHENTVTIVNRSPVVGRP 165 (276)
T ss_dssp HTTSCGG-GB-TTC-CSHHHHHHHHTTCCSSCCHHHHHHHHHHHHH-------------T--CCSCEEEEECCCTTTHHH
T ss_pred HhhCCCC-Cc-ccC-CCccchhhhhcCCCCCCCCcHHHHHHHHHHh-------------C--cCCCEEEEEcCChHHHHH
Confidence 1222110 00 011 11111 1225888887654 2 6799999999998 7999
Q ss_pred HHHHHHHCCCeEEEEecC
Q 015614 383 LAFGAKSRGARVVIFDID 400 (403)
Q Consensus 383 i~~al~~~g~~i~v~nR~ 400 (403)
++..|...|+.|++++|.
T Consensus 166 lA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 166 LSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp HHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHCCCeEEEEeCC
Confidence 999999999999999874
No 41
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.49 E-value=0.082 Score=48.60 Aligned_cols=117 Identities=16% Similarity=0.208 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCC-CCCCHHHHHHHHHHHHHcCCc
Q 015614 22 VEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGL-YEGDEHKRLEALHLAEDLGAD 100 (403)
Q Consensus 22 ~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~-~~~~~~~~~~ll~~~~~~g~~ 100 (403)
.+++......+...|+.+|+. ...+.+..+|+.+++|+|--+|.. -||. +-.++ +.+-++.+.+.|+|
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~--------~~~~~i~~ir~~v~~Pvig~~k~~-~~~~~~~I~~--~~~~i~~~~~aGad 103 (229)
T 3q58_A 35 PEIVAAMAQAAASAGAVAVRI--------EGIENLRTVRPHLSVPIIGIIKRD-LTGSPVRITP--YLQDVDALAQAGAD 103 (229)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE--------ESHHHHHHHGGGCCSCEEEECBCC-CSSCCCCBSC--SHHHHHHHHHHTCS
T ss_pred cchHHHHHHHHHHCCCcEEEE--------CCHHHHHHHHHhcCCCEEEEEeec-CCCCceEeCc--cHHHHHHHHHcCCC
Confidence 566676677777889999886 124678899999999998665532 2331 11111 22234567788999
Q ss_pred EEEEeccc--cchHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 101 YVDFELKV--ASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 101 yvDiEl~~--~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
+|-++... .++.+.++. ..+..+..++++.|+ .++ ..++.+.|+|++-+
T Consensus 104 ~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t------~ee----a~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 104 IIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCST------VNE----GISCHQKGIEFIGT 155 (229)
T ss_dssp EEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSS------HHH----HHHHHHTTCSEEEC
T ss_pred EEEECccccCChHHHHHHHHHHHHCCCEEEEecCC------HHH----HHHHHhCCCCEEEe
Confidence 99887653 222333333 234457889999885 233 45677889999954
No 42
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.27 E-value=0.00086 Score=56.75 Aligned_cols=35 Identities=17% Similarity=0.173 Sum_probs=32.4
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+++++|+|+|+.|++++..|.+.|++|++++|+.+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNID 55 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 78999999999999999999999999999999864
No 43
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.25 E-value=0.0022 Score=51.34 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=31.7
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCC-CeEEEEecCCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g-~~i~v~nR~~~ 402 (403)
+++++|+|+|+.|++++..|.+.| .+|++++|+++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~ 40 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLA 40 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHH
Confidence 578999999999999999999999 59999999753
No 44
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.19 E-value=0.11 Score=47.54 Aligned_cols=118 Identities=18% Similarity=0.225 Sum_probs=68.8
Q ss_pred EEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHH
Q 015614 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92 (403)
Q Consensus 13 icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 92 (403)
|+..+...+.+++...++.+.+.|++++|+|.. ..+..+.++.+++..+ .+++-. |.. .+. ++ ++
T Consensus 19 ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k---~~~~~~~i~~l~~~~~-~l~vga------Gtv-l~~-d~---~~ 83 (224)
T 1vhc_A 19 IVPVIALDNADDILPLADTLAKNGLSVAEITFR---SEAAADAIRLLRANRP-DFLIAA------GTV-LTA-EQ---VV 83 (224)
T ss_dssp EEEEECCSSGGGHHHHHHHHHHTTCCEEEEETT---STTHHHHHHHHHHHCT-TCEEEE------ESC-CSH-HH---HH
T ss_pred eEEEEeCCCHHHHHHHHHHHHHcCCCEEEEecc---CchHHHHHHHHHHhCc-CcEEee------CcE-eeH-HH---HH
Confidence 455668888999988888889999999999953 2222345665665553 233221 121 122 23 35
Q ss_pred HHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 93 ~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
.+++.|+++|=.- ....+..+..+. .+...+++ .| || +|+ .++.+.|+|++|+
T Consensus 84 ~A~~aGAd~v~~p-~~d~~v~~~ar~--~g~~~i~G-v~----t~--~e~----~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 84 LAKSSGADFVVTP-GLNPKIVKLCQD--LNFPITPG-VN----NP--MAI----EIALEMGISAVKF 136 (224)
T ss_dssp HHHHHTCSEEECS-SCCHHHHHHHHH--TTCCEECE-EC----SH--HHH----HHHHHTTCCEEEE
T ss_pred HHHHCCCCEEEEC-CCCHHHHHHHHH--hCCCEEec-cC----CH--HHH----HHHHHCCCCEEEE
Confidence 6788899999433 122222222221 23334454 44 33 333 4466789999999
No 45
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.15 E-value=0.1 Score=47.10 Aligned_cols=117 Identities=18% Similarity=0.222 Sum_probs=67.9
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 91 (403)
.++..+...+.+++...++.+.+.|+++||+|.. ..+..+.++.+++ .+ +.+-. |.. .. .+ -+
T Consensus 14 ~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k---~~~~~~~i~~~~~-~~--~~~ga------g~v-l~-~d---~~ 76 (207)
T 2yw3_A 14 RLLPLLTVRGGEDLLGLARVLEEEGVGALEITLR---TEKGLEALKALRK-SG--LLLGA------GTV-RS-PK---EA 76 (207)
T ss_dssp CEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECS---STHHHHHHHHHTT-SS--CEEEE------ESC-CS-HH---HH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCC---ChHHHHHHHHHhC-CC--CEEEe------CeE-ee-HH---HH
Confidence 4566677778888888788888889999999953 2222344555554 22 22211 222 22 22 34
Q ss_pred HHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 92 ~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
+.+++.|+++|-.- ....+..+.... .+..+|...|+ | +|+ .++.+.|+|++|+
T Consensus 77 ~~A~~~GAd~v~~~-~~d~~v~~~~~~---~g~~~i~G~~t----~--~e~----~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 77 EAALEAGAAFLVSP-GLLEEVAALAQA---RGVPYLPGVLT----P--TEV----ERALALGLSALKF 130 (207)
T ss_dssp HHHHHHTCSEEEES-SCCHHHHHHHHH---HTCCEEEEECS----H--HHH----HHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEcC-CCCHHHHHHHHH---hCCCEEecCCC----H--HHH----HHHHHCCCCEEEE
Confidence 56788899998654 222333222222 23445555663 2 333 4455779999999
No 46
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.14 E-value=0.078 Score=48.41 Aligned_cols=113 Identities=13% Similarity=0.122 Sum_probs=73.4
Q ss_pred CCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEe-c--CCCCCCC-chHHHHHHhcCCCcEEEEeecCCCCCCCCCC
Q 015614 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-D--CINNFQP-GKDLEIILTKKPLPVLIVYRPKWAGGLYEGD 83 (403)
Q Consensus 8 ~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRl-D--~l~~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~ 83 (403)
..+++|+-+|..-|...+..+++.+.+.|+|++++|+ | +.+.... .+.++.+++.++.|+.+.+=.. +
T Consensus 4 ~~~~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~--------d 75 (228)
T 1h1y_A 4 AAAAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVT--------N 75 (228)
T ss_dssp --CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESS--------C
T ss_pred ccCCeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEec--------C
Confidence 4578899999999999999999988888999999996 2 2222211 2567788877777887666542 1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccccchH-HHHHHhccCCCcEEEEecc
Q 015614 84 EHKRLEALHLAEDLGADYVDFELKVASNI-LGKQYSSHQSGTRFIVSCN 131 (403)
Q Consensus 84 ~~~~~~ll~~~~~~g~~yvDiEl~~~~~~-~~~l~~~~~~~~kiI~S~H 131 (403)
++. +++.+++.|+++|-+=....+.. .+.+...++.+.++++|.+
T Consensus 76 ~~~---~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~ 121 (228)
T 1h1y_A 76 PSD---YVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLR 121 (228)
T ss_dssp GGG---GHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEEC
T ss_pred HHH---HHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCCEEEEEe
Confidence 222 35566778999986655443333 1112222235678888874
No 47
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.11 E-value=0.0025 Score=63.75 Aligned_cols=37 Identities=24% Similarity=0.478 Sum_probs=34.2
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
..+++++|+|+|++|++++..|...|+ +|+++||+.+
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ 202 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYE 202 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHH
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 468999999999999999999999999 9999999864
No 48
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.11 E-value=0.15 Score=46.23 Aligned_cols=119 Identities=13% Similarity=0.143 Sum_probs=70.9
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 91 (403)
.++..+...+.+++...++.+.+.|++++|+|.. ..+..+.++.+++..+-.++ -. |.. .+. + -+
T Consensus 17 ~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k---~~~~~~~i~~l~~~~~~~~v-ga------gtv-i~~-d---~~ 81 (214)
T 1wbh_A 17 PVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLR---TECAVDAIRAIAKEVPEAIV-GA------GTV-LNP-Q---QL 81 (214)
T ss_dssp SEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESC---STTHHHHHHHHHHHCTTSEE-EE------ESC-CSH-H---HH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCC---ChhHHHHHHHHHHHCcCCEE-ee------CEE-EEH-H---HH
Confidence 3556678888999988888888999999999953 22223456656665542222 11 222 222 2 33
Q ss_pred HHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 92 ~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
+.+++.|+++|=.- ....+..+.. +..+..+|...|+ | +| ..++.+.|+|++|+
T Consensus 82 ~~A~~aGAd~v~~p-~~d~~v~~~~---~~~g~~~i~G~~t----~--~e----~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 82 AEVTEAGAQFAISP-GLTEPLLKAA---TEGTIPLIPGIST----V--SE----LMLGMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHTCSCEEES-SCCHHHHHHH---HHSSSCEEEEESS----H--HH----HHHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEcC-CCCHHHHHHH---HHhCCCEEEecCC----H--HH----HHHHHHCCCCEEEE
Confidence 56788899998644 2222222211 1234455555653 3 33 34556789999999
No 49
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.10 E-value=0.16 Score=46.59 Aligned_cols=117 Identities=18% Similarity=0.172 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCC-CCCCHHHHHHHHHHHHHcCCc
Q 015614 22 VEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGL-YEGDEHKRLEALHLAEDLGAD 100 (403)
Q Consensus 22 ~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~-~~~~~~~~~~ll~~~~~~g~~ 100 (403)
.+++....+.+...|+.+|+. ...+.+..+|+.+++|+|--+| +.-||. +-.++ +++-++.+.+.|+|
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~--------~~~~~i~~ir~~v~~Pvig~~k-~d~~~~~~~I~~--~~~~i~~~~~~Gad 103 (232)
T 3igs_A 35 PEIVAAMALAAEQAGAVAVRI--------EGIDNLRMTRSLVSVPIIGIIK-RDLDESPVRITP--FLDDVDALAQAGAA 103 (232)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE--------ESHHHHHHHHTTCCSCEEEECB-CCCSSCCCCBSC--SHHHHHHHHHHTCS
T ss_pred cchHHHHHHHHHHCCCeEEEE--------CCHHHHHHHHHhcCCCEEEEEe-ecCCCcceEeCc--cHHHHHHHHHcCCC
Confidence 566677677777889999886 1246788999889999965444 333551 11111 22234567788999
Q ss_pred EEEEeccc--cchHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 101 YVDFELKV--ASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 101 yvDiEl~~--~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
+|=+.... .++.++++. ..+..+..++++.|+ .++ ..++.+.|+|++-+
T Consensus 104 ~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t------~ee----a~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 104 IIAVDGTARQRPVAVEALLARIHHHHLLTMADCSS------VDD----GLACQRLGADIIGT 155 (232)
T ss_dssp EEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCS------HHH----HHHHHHTTCSEEEC
T ss_pred EEEECccccCCHHHHHHHHHHHHHCCCEEEEeCCC------HHH----HHHHHhCCCCEEEE
Confidence 99887653 122333333 234457889999885 223 45677889999953
No 50
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=96.03 E-value=0.094 Score=46.72 Aligned_cols=118 Identities=19% Similarity=0.226 Sum_probs=75.7
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcC--CCcEEE-EeecCCCCCCCCCCHHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK--PLPVLI-VYRPKWAGGLYEGDEHKRL 88 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~--~~PiI~-T~R~~~eGG~~~~~~~~~~ 88 (403)
.++..+...+.+++...++.+.+.|+|+||+-+.. ....+.+..+|+.. +.++-+ |+. +.++
T Consensus 11 ~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~---~~~~~~i~~ir~~~~~~~~ig~~~v~----------~~~~-- 75 (205)
T 1wa3_A 11 KIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTV---PDADTVIKELSFLKEKGAIIGAGTVT----------SVEQ-- 75 (205)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHTHHHHHTTCEEEEESCC----------SHHH--
T ss_pred CEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC---hhHHHHHHHHHHHCCCCcEEEecccC----------CHHH--
Confidence 45678899999999988888888899999986542 11123466666553 333333 211 2222
Q ss_pred HHHHHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015614 89 EALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 89 ~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia 160 (403)
.+.+.+.|+||| +--.+..+..+.. ++.+..+|.-.| || ++ ..++.+.|+|++|+-
T Consensus 76 --~~~a~~~Gad~i-v~~~~~~~~~~~~---~~~g~~vi~g~~----t~--~e----~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 76 --CRKAVESGAEFI-VSPHLDEEISQFC---KEKGVFYMPGVM----TP--TE----LVKAMKLGHTILKLF 131 (205)
T ss_dssp --HHHHHHHTCSEE-ECSSCCHHHHHHH---HHHTCEEECEEC----SH--HH----HHHHHHTTCCEEEET
T ss_pred --HHHHHHcCCCEE-EcCCCCHHHHHHH---HHcCCcEECCcC----CH--HH----HHHHHHcCCCEEEEc
Confidence 466778899999 7655555444333 235677876554 32 23 446678999999973
No 51
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.00 E-value=0.054 Score=48.33 Aligned_cols=131 Identities=13% Similarity=0.084 Sum_probs=82.8
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcC-CCcEEEEeecCCCCCCCCCCHHHHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLEA 90 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~l 90 (403)
.+|+.+-.++.++.++.++.... ++|++|+-..++.... .+.++.+++.. +.|+++.+-.. +. .+. .
T Consensus 2 ~li~a~d~~~~~~~~~~~~~~~~-~v~~iev~~~~~~~~g-~~~i~~l~~~~~~~~i~~~l~~~------di-~~~---~ 69 (207)
T 3ajx_A 2 KLQVAIDLLSTEAALELAGKVAE-YVDIIELGTPLIKAEG-LSVITAVKKAHPDKIVFADMKTM------DA-GEL---E 69 (207)
T ss_dssp EEEEEECCSCHHHHHHHHHHHGG-GCSEEEECHHHHHHHC-THHHHHHHHHSTTSEEEEEEEEC------SC-HHH---H
T ss_pred eEEEEeCCCCHHHHHHHHHHhhc-cCCEEEECcHHHHhhC-HHHHHHHHHhCCCCeEEEEEEec------Cc-cHH---H
Confidence 57899999999999998887644 8999999776542222 24677888776 78999866532 11 222 3
Q ss_pred HHHHHHcCCcEEEEeccccchHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015614 91 LHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 91 l~~~~~~g~~yvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia 160 (403)
.+.++++|+++|-+-....++..+.++ ..++.+.++-+|.|.. .+| ++ ..+.+.+.|+|+||+.
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~-~~p--~~---~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGI-EDK--AT---RAQEVRALGAKFVEMH 134 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTC-SSH--HH---HHHHHHHTTCSEEEEE
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecC-CCh--HH---HHHHHHHhCCCEEEEE
Confidence 467888999999775544432232332 1222355666777732 132 22 2334445689999875
No 52
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.85 E-value=0.086 Score=47.76 Aligned_cols=131 Identities=11% Similarity=0.029 Sum_probs=81.6
Q ss_pred CeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhc-CCCcEEEEeecCCCCCCCCCCHHHHH
Q 015614 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRL 88 (403)
Q Consensus 10 ~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~ 88 (403)
++.+++++-.+++++.++.++.. ..++|++|+-+-+..... .+.++.+|+. .+.|+++-+-.- + ..+.
T Consensus 6 ~~~lilalD~~~~~~~~~~~~~~-~~~vd~ie~g~~~~~~~G-~~~i~~lr~~~~~~~i~ld~~l~-d------~p~~-- 74 (218)
T 3jr2_A 6 KPMIQIALDQTNLTDAVAVASNV-ASYVDVIEVGTILAFAEG-MKAVSTLRHNHPNHILVCDMKTT-D------GGAI-- 74 (218)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHH-GGGCSEEEECHHHHHHHT-THHHHHHHHHCTTSEEEEEEEEC-S------CHHH--
T ss_pred CCCeEEEeCCCCHHHHHHHHHHh-cCCceEEEeCcHHHHhcC-HHHHHHHHHhCCCCcEEEEEeec-c------cHHH--
Confidence 57899999999999999988874 678999998654422112 2467888877 467888765432 2 1222
Q ss_pred HHHHHHHHcCCcEEEEeccccchHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 89 EALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 89 ~ll~~~~~~g~~yvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
..+.+.+.|+++|-+-.....+..++++ ..++.+.+.++-.- +.++.+++.+ +.+.|+|.+++
T Consensus 75 -~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l---~~~T~~~~~~----~~~~g~d~v~~ 138 (218)
T 3jr2_A 75 -LSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIY---GNWTMQDAKA----WVDLGITQAIY 138 (218)
T ss_dssp -HHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECC---SSCCHHHHHH----HHHTTCCEEEE
T ss_pred -HHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeee---ecCCHHHHHH----HHHcCccceee
Confidence 4478889999999887655433233332 22334566654111 1122233333 33458998876
No 53
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.79 E-value=0.006 Score=58.24 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=35.1
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.+++++|+|+|++|++++..|...|++|++++|+.
T Consensus 153 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 153 YTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35779999999999999999999999999999999975
No 54
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.78 E-value=0.0099 Score=50.71 Aligned_cols=37 Identities=30% Similarity=0.337 Sum_probs=33.6
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+++++|+|+|..|+.++..|.+.|.+|++++|+++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4578999999999999999999999999999999865
No 55
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.76 E-value=0.0064 Score=57.88 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=34.5
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+.+++++|+|+|++|++++..|...|++|++++|+.
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4678999999999999999999999999999999975
No 56
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.61 E-value=0.81 Score=41.00 Aligned_cols=118 Identities=12% Similarity=0.139 Sum_probs=71.4
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCC-CCCCCCHHHHHHHHHHHHHcCC
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAG-GLYEGDEHKRLEALHLAEDLGA 99 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eG-G~~~~~~~~~~~ll~~~~~~g~ 99 (403)
+.+.....++.+.+.|++.+++ | . .+.++.+++.+++|++-.+|....| +..-....+ .++.+++.|+
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~--~-----~-~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~---~i~~~~~~Ga 89 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRA--N-----T-KEDILAIKETVDLPVIGIVKRDYDHSDVFITATSK---EVDELIESQC 89 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE--E-----S-HHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHH---HHHHHHHHTC
T ss_pred CCccHHHHHHHHHHCCCeeecc--C-----C-HHHHHHHHHhcCCCEEeeeccCCCccccccCCcHH---HHHHHHhCCC
Confidence 3355555566666789999976 3 2 3578888888999997655543323 332222222 3455678899
Q ss_pred cEEEEeccc---c----chHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015614 100 DYVDFELKV---A----SNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 100 ~yvDiEl~~---~----~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia 160 (403)
++|-+.... + .+.++.++... ++..++.+.|+ .+++ .++.+.|+|++.+.
T Consensus 90 d~v~l~~~~~~~p~~~~~~~i~~~~~~~-~~~~v~~~~~t------~~e~----~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 90 EVIALDATLQQRPKETLDELVSYIRTHA-PNVEIMADIAT------VEEA----KNAARLGFDYIGTT 146 (223)
T ss_dssp SEEEEECSCSCCSSSCHHHHHHHHHHHC-TTSEEEEECSS------HHHH----HHHHHTTCSEEECT
T ss_pred CEEEEeeecccCcccCHHHHHHHHHHhC-CCceEEecCCC------HHHH----HHHHHcCCCEEEeC
Confidence 998776543 1 13344444322 36778777763 2333 34678899998753
No 57
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.61 E-value=0.0071 Score=56.34 Aligned_cols=35 Identities=26% Similarity=0.400 Sum_probs=32.3
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~ 401 (403)
++++|+|+|+||.|..++..|+..|+ +|+|++++.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 36799999999999999999999999 999999874
No 58
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.60 E-value=0.073 Score=47.64 Aligned_cols=130 Identities=18% Similarity=0.196 Sum_probs=85.5
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecC-CCCCCCchHHHHHHhc-CCCcEEEEeecCCCCCCCCCCHHHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDC-INNFQPGKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRLE 89 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~-l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (403)
++++++-.+++++.+..++.. ..++|++|+-..+ +.. . .+.++.+|+. .+.|+.++.-.. . .. ++
T Consensus 2 ~li~a~D~~~~~~~~~~~~~~-~~~~diie~G~p~~~~~-g-~~~i~~ir~~~~~~~i~~~~~~~-~------~~-~~-- 68 (211)
T 3f4w_A 2 KLQLALDELTLPEAMVFMDKV-VDDVDIIEVGTPFLIRE-G-VNAIKAIKEKYPHKEVLADAKIM-D------GG-HF-- 68 (211)
T ss_dssp EEEEEECSCCHHHHHHHHHHH-GGGCSEEEECHHHHHHH-T-THHHHHHHHHCTTSEEEEEEEEC-S------CH-HH--
T ss_pred cEEEEeCCCCHHHHHHHHHHh-hcCccEEEeCcHHHHhc-c-HHHHHHHHHhCCCCEEEEEEEec-c------ch-HH--
Confidence 478999999999999888876 4689999987643 211 1 2468888877 588987765442 1 11 22
Q ss_pred HHHHHHHcCCcEEEEeccccchHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015614 90 ALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 90 ll~~~~~~g~~yvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia 160 (403)
+++.+.+.|+++|-+-.....+.++++. ..++.+.++++..++ |. +..+.++++.+.|+|++.+-
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~----~~--t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMIC----VD--DLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTT----CS--SHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecC----CC--CHHHHHHHHHHcCCCEEEEc
Confidence 3688899999999986544323223333 223346788876443 21 23455667777899998653
No 59
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.54 E-value=0.012 Score=54.99 Aligned_cols=34 Identities=26% Similarity=0.402 Sum_probs=31.0
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
++++|+|+|+||+|.+++..|+..|+ +|+|++++
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 46899999999999999999999999 99999654
No 60
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.49 E-value=0.013 Score=57.29 Aligned_cols=35 Identities=20% Similarity=0.320 Sum_probs=32.3
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
+++++|+|+|+||.|.+++..|+..|+ +|+|++++
T Consensus 32 L~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 32 IKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 357899999999999999999999999 99999875
No 61
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.46 E-value=0.015 Score=59.49 Aligned_cols=38 Identities=39% Similarity=0.600 Sum_probs=35.0
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.||+++|+|+||.|++++..|+..|++|++++|++
T Consensus 261 ~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 261 VMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45789999999999999999999999999999999874
No 62
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.31 E-value=0.023 Score=54.95 Aligned_cols=136 Identities=16% Similarity=0.131 Sum_probs=77.7
Q ss_pred HHHHHhcCCCceEeecCcc-cHHHHHHHh-cCCCCceEEecccchHHHH--cccccCCHHHhhccceeEE-----E-E--
Q 015614 258 NPTFRHVNYNGIYVPMFVD-DLKKFFSTY-SSPDFAGFSVGFPYKEAVM--KFCDEVHPLAQAIAAVNTI-----I-R-- 325 (403)
Q Consensus 258 n~~~~~~gl~~~y~~~~~~-~~~~~~~~~-~~~~~~G~~VT~P~K~~v~--~~~d~~~~~A~~igavNTi-----~-~-- 325 (403)
....+++|+......++-+ ++.+.+..+ .++++.|+-|-.|.-..+- ..++.++|. +.+-..+.+ . .
T Consensus 58 ~k~~~~~Gi~~~~~~l~~~~~l~~~i~~lN~d~~v~GIlvqlPlp~~~~~~~i~~~I~p~-KDVDG~~~~n~g~l~~~~~ 136 (320)
T 1edz_A 58 QKTSESMGFRYDLRVIEDKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKE-KDVEGLNHVYYQNLYHNVR 136 (320)
T ss_dssp HHHHHHHTCEEEEEECSSGGGHHHHHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTT-TBTTCCSHHHHHHHHTTCC
T ss_pred HHHHHHcCCEEEEEECCChHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcc-cccCcCChhhhHHHhcCCc
Confidence 3457889998776666543 477777777 5788999999999742221 112222211 111000000 0 0
Q ss_pred --eccC--CeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhH-HHHHHHHHHHCCCeEEEEecC
Q 015614 326 --RPSD--GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGA-GRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 326 --~~~~--g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGa-arai~~al~~~g~~i~v~nR~ 400 (403)
.+.+ ..+ .-.--.|.+..|++. +..+..-+.+..+++++++|+|+|.+ |+.++..|...|+.|+|+||+
T Consensus 137 ~l~~~~~~~~~--~PcTp~a~v~ll~~~----~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 137 YLDKENRLKSI--LPCTPLAIVKILEFL----KIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp BSSSSSCSBCC--CCHHHHHHHHHHHHT----TCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred cccccccCCCc--CCCcHHHHHHHHHhh----cccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 0000 000 011235666766652 00000000124678999999999985 999999999999999999997
No 63
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.23 E-value=0.27 Score=44.63 Aligned_cols=112 Identities=9% Similarity=0.137 Sum_probs=68.8
Q ss_pred HHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCC-CCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 015614 24 QVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKW-AGGLYEGDEHKRLEALHLAEDLGADYV 102 (403)
Q Consensus 24 e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~-eGG~~~~~~~~~~~ll~~~~~~g~~yv 102 (403)
++...++.+.+.|++.++++ . .+.+..+++.+++|++-.+|..- +++..-... .+.++.+.+.|++.|
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~-------~-~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~---~~~i~~~~~~Gad~V 105 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN-------S-VRDIKEIQAITDLPIIGIIKKDYPPQEPFITAT---MTEVDQLAALNIAVI 105 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE-------S-HHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCS---HHHHHHHHTTTCSEE
T ss_pred hHHHHHHHHHHCCCcEeecC-------C-HHHHHHHHHhCCCCEEeeEcCCCCccccccCCh---HHHHHHHHHcCCCEE
Confidence 44444455556799999874 2 24688888888999965555332 333322222 233566788999999
Q ss_pred EEecccc--------chHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEE
Q 015614 103 DFELKVA--------SNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADII 157 (403)
Q Consensus 103 DiEl~~~--------~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadiv 157 (403)
.+..... .+.++.++.. -++..++++.|+ .++ ..++.+.|+|++
T Consensus 106 ~l~~~~~~~~~~~~~~~~i~~i~~~-~~~~~v~~~~~t------~~e----a~~a~~~Gad~i 157 (234)
T 1yxy_A 106 AMDCTKRDRHDGLDIASFIRQVKEK-YPNQLLMADIST------FDE----GLVAHQAGIDFV 157 (234)
T ss_dssp EEECCSSCCTTCCCHHHHHHHHHHH-CTTCEEEEECSS------HHH----HHHHHHTTCSEE
T ss_pred EEcccccCCCCCccHHHHHHHHHHh-CCCCeEEEeCCC------HHH----HHHHHHcCCCEE
Confidence 9876532 2344444432 136778888773 223 556677899988
No 64
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=95.20 E-value=0.27 Score=44.95 Aligned_cols=109 Identities=11% Similarity=0.143 Sum_probs=71.7
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEe-cC--CCCCCC-chHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DC--INNFQP-GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRl-D~--l~~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 87 (403)
+|+-+|..-|...+..+++.+.+.|+|.+|+|+ |- .++.+. .+.++.+|+.++.|+.+.+=.. + .+.
T Consensus 6 ~i~psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~-d-------p~~- 76 (230)
T 1tqj_A 6 VVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIV-E-------PEK- 76 (230)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESS-S-------GGG-
T ss_pred EEEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEcc-C-------HHH-
Confidence 489999999999999889888888999999998 21 112221 2567788887788988777642 1 122
Q ss_pred HHHHHHHHHcCCcEEEEecc--ccchHHHHHHhccCCCcEEEEecc
Q 015614 88 LEALHLAEDLGADYVDFELK--VASNILGKQYSSHQSGTRFIVSCN 131 (403)
Q Consensus 88 ~~ll~~~~~~g~~yvDiEl~--~~~~~~~~l~~~~~~~~kiI~S~H 131 (403)
+++.+++.|+++|-+=.. ..+...+.+...+..+.++.+|.+
T Consensus 77 --~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~ 120 (230)
T 1tqj_A 77 --YVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLN 120 (230)
T ss_dssp --THHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEEC
T ss_pred --HHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEe
Confidence 346677789999876554 322222222222345667777763
No 65
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.19 E-value=0.02 Score=56.64 Aligned_cols=38 Identities=29% Similarity=0.275 Sum_probs=34.6
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFGT 403 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~k 403 (403)
+.+++++|+|+|++|++++..+..+|++|++++|+.+|
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~ 207 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAAT 207 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 45889999999999999999999999999999998754
No 66
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.19 E-value=0.34 Score=45.91 Aligned_cols=149 Identities=17% Similarity=0.181 Sum_probs=90.4
Q ss_pred EecccCCHHHHHHHHHHHHhcCCCEEEEEecCCC-CCCCc-hHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHH---HHH
Q 015614 15 APLMAQSVEQVLSNMYQAKAEGADVVEIRLDCIN-NFQPG-KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK---RLE 89 (403)
Q Consensus 15 v~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~-~~~~~-~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~---~~~ 89 (403)
+=+...+++++. .+.+.|||.|||+-++.. ...|. ..++.+++..++|+-+-+|+. ||.|-.++++ ..+
T Consensus 42 lEvc~~s~~~a~----~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~~ipV~vMIRPR--gGdF~Ys~~E~~~M~~ 115 (287)
T 3iwp_A 42 MEVCVDSVESAV----NAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRPR--GGDFLYSDREIEVMKA 115 (287)
T ss_dssp EEEEESSHHHHH----HHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTCCSCEEEECCSS--SSCSCCCHHHHHHHHH
T ss_pred EEEEeCCHHHHH----HHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEecC--CCCcccCHHHHHHHHH
Confidence 344456666665 445679999999944432 23332 456677777899999999975 6666666533 445
Q ss_pred HHHHHHHcCCcEEEEec---c--ccchHHHHHHhccCCCcEEEEeccC-CCCCCCHhHHHHHHHHHHHcCCCEEEEEeec
Q 015614 90 ALHLAEDLGADYVDFEL---K--VASNILGKQYSSHQSGTRFIVSCNL-DCETPSEEDLGYLVSRMQATGADIIKLVFSV 163 (403)
Q Consensus 90 ll~~~~~~g~~yvDiEl---~--~~~~~~~~l~~~~~~~~kiI~S~H~-f~~tp~~~~l~~~~~~~~~~gadivKia~~~ 163 (403)
-++.+.+.|++.|=+=. + .+.+..++|+... +.. =+++|. |+.+++.. +-++...++|.|-|=-.-..
T Consensus 116 dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a-~~l--~vTFHRAFD~~~d~~---~Ale~Li~lGvdrILTSG~~ 189 (287)
T 3iwp_A 116 DIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAIC-RPL--PVTFHRAFDMVHDPM---AALETLLTLGFERVLTSGCD 189 (287)
T ss_dssp HHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHH-TTS--CEEECGGGGGCSCHH---HHHHHHHHHTCSEEEECTTS
T ss_pred HHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHc-CCC--cEEEECchhccCCHH---HHHHHHHHcCCCEEECCCCC
Confidence 56678889999988753 1 2234455665332 233 357887 88877643 44555666687655443333
Q ss_pred CCHhHHHHHHHH
Q 015614 164 NDITEIARIFQL 175 (403)
Q Consensus 164 ~~~~D~~~ll~~ 175 (403)
.+..+.+..++-
T Consensus 190 ~~a~~Gl~~Lk~ 201 (287)
T 3iwp_A 190 SSALEGLPLIKR 201 (287)
T ss_dssp SSTTTTHHHHHH
T ss_pred CChHHhHHHHHH
Confidence 333444444433
No 67
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=95.15 E-value=0.19 Score=45.95 Aligned_cols=118 Identities=20% Similarity=0.254 Sum_probs=68.0
Q ss_pred EEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHH
Q 015614 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92 (403)
Q Consensus 13 icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 92 (403)
|...+...+.+++...++.+.+.|++++|+|.. ..+..+.++.+++..+ .+++-. |.. .+. +-++
T Consensus 28 ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k---~~~~~~~i~~l~~~~~-~~~iga------gtv-l~~----d~~~ 92 (225)
T 1mxs_A 28 ILPVITIAREEDILPLADALAAGGIRTLEVTLR---SQHGLKAIQVLREQRP-ELCVGA------GTV-LDR----SMFA 92 (225)
T ss_dssp EEEEECCSCGGGHHHHHHHHHHTTCCEEEEESS---STHHHHHHHHHHHHCT-TSEEEE------ECC-CSH----HHHH
T ss_pred EEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecC---CccHHHHHHHHHHhCc-ccEEee------CeE-eeH----HHHH
Confidence 455567788888888888888999999999953 2222344555655542 222211 222 222 2345
Q ss_pred HHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 93 ~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
.+++.|+++|=.- ....+..+ . .+..+..+|...| || +| ..++.+.|+|++|+
T Consensus 93 ~A~~aGAd~v~~p-~~d~~v~~-~--~~~~g~~~i~G~~----t~--~e----~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 93 AVEAAGAQFVVTP-GITEDILE-A--GVDSEIPLLPGIS----TP--SE----IMMGYALGYRRFKL 145 (225)
T ss_dssp HHHHHTCSSEECS-SCCHHHHH-H--HHHCSSCEECEEC----SH--HH----HHHHHTTTCCEEEE
T ss_pred HHHHCCCCEEEeC-CCCHHHHH-H--HHHhCCCEEEeeC----CH--HH----HHHHHHCCCCEEEE
Confidence 6788899998543 12222211 1 1123444554455 33 33 34566889999999
No 68
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=95.11 E-value=0.75 Score=42.79 Aligned_cols=146 Identities=19% Similarity=0.206 Sum_probs=90.2
Q ss_pred cccCCHHHHHHHHHHHHhcCCCEEEEEecCCC-CCCCc-hHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHH---HHH
Q 015614 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCIN-NFQPG-KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRL---EAL 91 (403)
Q Consensus 17 l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~-~~~~~-~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~---~ll 91 (403)
+...+++++. .+.+.|||-|||.-++-. ...|. ..++.+++..++|+.+-+|+. ||-|-.++++.. +=+
T Consensus 6 vc~~s~~~a~----~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~ipv~vMIRPR--~GdF~Ys~~E~~~M~~Di 79 (256)
T 1twd_A 6 ICCYSMECAL----TAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPR--GGDFCYSDGEFAAILEDV 79 (256)
T ss_dssp EEESSHHHHH----HHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHCCSCEEEBCCSS--SSCSCCCHHHHHHHHHHH
T ss_pred EEeCCHHHHH----HHHHcCCCEEEEcCCcccCCCCCCHHHHHHHHHHcCCceEEEECCC--CCCCcCCHHHHHHHHHHH
Confidence 3445666664 445689999999987643 33443 345566777899999999964 566666664433 334
Q ss_pred HHHHHcCCcEEEEecc-----ccchHHHHHHhccCCCcEEEEeccC-CCCCCCHhHHHHHHHHHHHcCCCEEEEEee--c
Q 015614 92 HLAEDLGADYVDFELK-----VASNILGKQYSSHQSGTRFIVSCNL-DCETPSEEDLGYLVSRMQATGADIIKLVFS--V 163 (403)
Q Consensus 92 ~~~~~~g~~yvDiEl~-----~~~~~~~~l~~~~~~~~kiI~S~H~-f~~tp~~~~l~~~~~~~~~~gadivKia~~--~ 163 (403)
+.+.++|++-|=+=.- .+.+..++|+.. .++.. +.||- |+.+++.. +-++.+.++|.+ +|-+. +
T Consensus 80 ~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~-a~~~~--vTFHRAfD~~~d~~---~ale~L~~lG~~--rILTSG~~ 151 (256)
T 1twd_A 80 RTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAA-AGPLA--VTFHRAFDMCANPL---YTLNNLAELGIA--RVLTSGQK 151 (256)
T ss_dssp HHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHH-HTTSE--EEECGGGGGCSCHH---HHHHHHHHHTCC--EEEECTTS
T ss_pred HHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHH-hCCCc--EEEECchhccCCHH---HHHHHHHHcCCC--EEECCCCC
Confidence 5677889998766332 223445666633 13444 67776 88887554 446666677855 33344 3
Q ss_pred CCHhHHHHHHHHh
Q 015614 164 NDITEIARIFQLL 176 (403)
Q Consensus 164 ~~~~D~~~ll~~~ 176 (403)
.+..|.+.+++-+
T Consensus 152 ~~a~~g~~~L~~L 164 (256)
T 1twd_A 152 SDALQGLSKIMEL 164 (256)
T ss_dssp SSTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 4555665555544
No 69
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.85 E-value=0.017 Score=55.30 Aligned_cols=35 Identities=26% Similarity=0.454 Sum_probs=32.4
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
+++++|+|+|+||.|..++..|+..|+ +|+|++++
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 456899999999999999999999999 99999976
No 70
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.70 E-value=0.018 Score=56.88 Aligned_cols=37 Identities=35% Similarity=0.426 Sum_probs=33.8
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+.+++++|+|+|++|++++..++.+|++|++++|+.+
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~ 202 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGATVTVLDINID 202 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 5689999999999999999999999999999998753
No 71
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.64 E-value=0.018 Score=56.58 Aligned_cols=37 Identities=32% Similarity=0.412 Sum_probs=33.7
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+++++++|+|+|++|++++..++.+|++|++++|+.+
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~ 200 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHK 200 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 5678999999999999999999999999999998753
No 72
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=94.63 E-value=0.65 Score=42.38 Aligned_cols=138 Identities=16% Similarity=0.207 Sum_probs=85.2
Q ss_pred HHHhcCCCEEEEEecCCC-CCCCc-hHHHHHH---hcCCCcEEEEeecCCCCCCCCCCHHHHH---HHHHHHHHcCCcEE
Q 015614 31 QAKAEGADVVEIRLDCIN-NFQPG-KDLEIIL---TKKPLPVLIVYRPKWAGGLYEGDEHKRL---EALHLAEDLGADYV 102 (403)
Q Consensus 31 ~~~~~~~D~vElRlD~l~-~~~~~-~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~~~~~~---~ll~~~~~~g~~yv 102 (403)
.+.+.|||-|||.-++-. ...|+ ..++..+ +..++|+.+-+|++ ||-|-.++++.. +=++.+.++|++-|
T Consensus 16 ~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~~~~ipV~vMIRPR--~GdF~Ys~~E~~~M~~Di~~~~~~GadGv 93 (224)
T 2bdq_A 16 RLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVMIRPR--GGNFVYNDLELRIMEEDILRAVELESDAL 93 (224)
T ss_dssp GCCTTTCCEEEEEBCGGGTCBCCCHHHHHHHHHHHHHTTCEEEEECCSS--SSCSCCCHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHcCCCEEEEcCCcccCCcCCCHHHHHHHHHhhhhcCCceEEEECCC--CCCCcCCHHHHHHHHHHHHHHHHcCCCEE
Confidence 456789999999987643 33443 3455566 67899999999965 566666664433 33456778899987
Q ss_pred EEeccc-----cchHHHHHHhccCCCcEEEEeccC-CCCCCCHhHHHHHHHHHHHcCCCEEEEEee--cCC--HhHHHHH
Q 015614 103 DFELKV-----ASNILGKQYSSHQSGTRFIVSCNL-DCETPSEEDLGYLVSRMQATGADIIKLVFS--VND--ITEIARI 172 (403)
Q Consensus 103 DiEl~~-----~~~~~~~l~~~~~~~~kiI~S~H~-f~~tp~~~~l~~~~~~~~~~gadivKia~~--~~~--~~D~~~l 172 (403)
=+=.-. +.+..++|+..- ++.. +.||- |+.+|. .+..+-++.+.++|.+ +|-+. +.+ ..|.+..
T Consensus 94 V~G~Lt~dg~iD~~~~~~Li~~a-~~~~--vTFHRAFD~~~~-~d~~~ale~L~~lGv~--rILTSG~~~~~~a~~g~~~ 167 (224)
T 2bdq_A 94 VLGILTSNNHIDTEAIEQLLPAT-QGLP--LVFHMAFDVIPK-SDQKKSIDQLVALGFT--RILLHGSSNGEPIIENIKH 167 (224)
T ss_dssp EECCBCTTSSBCHHHHHHHHHHH-TTCC--EEECGGGGGSCT-TTHHHHHHHHHHTTCC--EEEECSCSSCCCGGGGHHH
T ss_pred EEeeECCCCCcCHHHHHHHHHHh-CCCe--EEEECchhccCC-cCHHHHHHHHHHcCCC--EEECCCCCCCCcHHHHHHH
Confidence 763222 234456666331 2333 67786 888842 2345557888888865 33333 233 5566555
Q ss_pred HHHh
Q 015614 173 FQLL 176 (403)
Q Consensus 173 l~~~ 176 (403)
++-+
T Consensus 168 L~~L 171 (224)
T 2bdq_A 168 IKAL 171 (224)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 73
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.61 E-value=0.044 Score=53.95 Aligned_cols=56 Identities=25% Similarity=0.412 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHhc-CcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 339 CEASITAIEDAIKER-GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 339 ~~G~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+.|+....++.+.+. + ...++|++++|+|.|.+|+.++..|.++|++|.+++|+.+
T Consensus 151 g~GV~~~~~~~~~~~~G--------~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~ 207 (364)
T 1leh_A 151 AYGVYRGMKAAAKEAFG--------SDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKA 207 (364)
T ss_dssp HHHHHHHHHHHHHHHHS--------SCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred hhHHHHHHHHHHHhhcc--------ccCCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 347776666655431 2 1257899999999999999999999999999989998753
No 74
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.57 E-value=0.025 Score=56.47 Aligned_cols=37 Identities=35% Similarity=0.295 Sum_probs=33.8
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+.+++++|+|+|++|++++..+..+|++|++++|+.+
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 3578999999999999999999999999999999864
No 75
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.48 E-value=0.029 Score=54.98 Aligned_cols=33 Identities=24% Similarity=0.507 Sum_probs=31.2
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
+++|+|+|+||.|.+++..|+..|+ +|+|++++
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 5799999999999999999999999 99999986
No 76
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=94.48 E-value=1 Score=43.86 Aligned_cols=93 Identities=13% Similarity=0.140 Sum_probs=65.3
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCC---------C-C--CC---chHHHHHHhcCCCcEEEEeecCCC
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCIN---------N-F--QP---GKDLEIILTKKPLPVLIVYRPKWA 76 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~---------~-~--~~---~~~l~~l~~~~~~PiI~T~R~~~e 76 (403)
.+++.|.+.+.+++..-++.+.+.|+|.|||-..+=. . + ++ .+.+..+++..++|+.+-+|..++
T Consensus 59 p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~ 138 (350)
T 3b0p_A 59 PIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLE 138 (350)
T ss_dssp SEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBT
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcC
Confidence 4678888999998888888887889999999885311 0 0 11 133445556678999888885322
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEEEecc
Q 015614 77 GGLYEGDEHKRLEALHLAEDLGADYVDFELK 107 (403)
Q Consensus 77 GG~~~~~~~~~~~ll~~~~~~g~~yvDiEl~ 107 (403)
-..+.+...++.+.+.+.|+++|.|.-.
T Consensus 139 ---~~~~~~~~~~~a~~l~~aG~d~I~V~~r 166 (350)
T 3b0p_A 139 ---GKETYRGLAQSVEAMAEAGVKVFVVHAR 166 (350)
T ss_dssp ---TCCCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred ---ccccHHHHHHHHHHHHHcCCCEEEEecC
Confidence 1123456778888889999999998643
No 77
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=94.39 E-value=0.026 Score=53.43 Aligned_cols=38 Identities=34% Similarity=0.375 Sum_probs=34.0
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.++||.+||-|+ +|.++|++..|++.|++|.+++|+.+
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~ 64 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKD 64 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 378999999985 88999999999999999999999753
No 78
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=94.32 E-value=0.041 Score=51.52 Aligned_cols=39 Identities=33% Similarity=0.583 Sum_probs=34.5
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFGT 403 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~k 403 (403)
.+++|+++|.|+ ||.|++++..|.+.|++|++++|+.++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~ 69 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGS 69 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 467899999985 899999999999999999999998653
No 79
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.12 E-value=0.049 Score=51.04 Aligned_cols=38 Identities=26% Similarity=0.448 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 67 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSD 67 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 467899999995 88999999999999999999999754
No 80
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.11 E-value=0.078 Score=53.24 Aligned_cols=38 Identities=26% Similarity=0.419 Sum_probs=35.0
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.|++++|+|.|..|++++..|...|++|++++|++
T Consensus 216 ~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 216 MMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45789999999999999999999999999999999874
No 81
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.09 E-value=0.97 Score=41.49 Aligned_cols=119 Identities=15% Similarity=0.234 Sum_probs=74.9
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 91 (403)
.|+..+...+.+++..-++.+...|+++||+++.--. ..+.++.+++..+-.+|-. |... +. +-.
T Consensus 35 ~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~---a~e~I~~l~~~~~~~~iGa------GTVl--t~----~~a 99 (232)
T 4e38_A 35 KVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDA---AVEAIRLLRQAQPEMLIGA------GTIL--NG----EQA 99 (232)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTT---HHHHHHHHHHHCTTCEEEE------ECCC--SH----HHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCC---HHHHHHHHHHhCCCCEEeE------CCcC--CH----HHH
Confidence 3566778889999998888889999999999887322 2356667776654444421 2222 22 234
Q ss_pred HHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 92 ~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
+.+++.|+++|=.- .+..+..+. .++.+..+|--.. || +| ..++.++|+|++|+
T Consensus 100 ~~Ai~AGA~fIvsP-~~~~~vi~~---~~~~gi~~ipGv~----Tp--tE----i~~A~~~Gad~vK~ 153 (232)
T 4e38_A 100 LAAKEAGATFVVSP-GFNPNTVRA---CQEIGIDIVPGVN----NP--ST----VEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHTCSEEECS-SCCHHHHHH---HHHHTCEEECEEC----SH--HH----HHHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEeC-CCCHHHHHH---HHHcCCCEEcCCC----CH--HH----HHHHHHcCCCEEEE
Confidence 57788899998432 122223322 2234677776654 44 23 34456789999998
No 82
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=94.01 E-value=3 Score=42.15 Aligned_cols=203 Identities=14% Similarity=0.058 Sum_probs=122.9
Q ss_pred HHHHHhcCCCEEEEE----ecC---CCCCCCchHHHHHHhc-CCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 015614 29 MYQAKAEGADVVEIR----LDC---INNFQPGKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGAD 100 (403)
Q Consensus 29 ~~~~~~~~~D~vElR----lD~---l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~ 100 (403)
++...+.|.+.||.- .|. +-..++.+.++.+++. .+.++..-+|..+-=|.....++-..+.++.+.+.|++
T Consensus 36 a~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd 115 (464)
T 2nx9_A 36 AQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMD 115 (464)
T ss_dssp HHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhCCcC
Confidence 344455799999996 231 1122445667777764 35566666786655565455565566778899999999
Q ss_pred EEEEeccccc--hHHHHHHhccCCCcEEEEeccCCCCCC-CHhHHHHHHHHHHHcCCCEEEEEeecC--CHhHHHHHHHH
Q 015614 101 YVDFELKVAS--NILGKQYSSHQSGTRFIVSCNLDCETP-SEEDLGYLVSRMQATGADIIKLVFSVN--DITEIARIFQL 175 (403)
Q Consensus 101 yvDiEl~~~~--~~~~~l~~~~~~~~kiI~S~H~f~~tp-~~~~l~~~~~~~~~~gadivKia~~~~--~~~D~~~ll~~ 175 (403)
.|-|=....+ .....+...+..+.++.++.|.+..++ +.+.+.++.+++.+.|||++-|+=|.- ++.++.++.+.
T Consensus 116 ~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~ 195 (464)
T 2nx9_A 116 VFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVST 195 (464)
T ss_dssp EEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHH
T ss_pred EEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHH
Confidence 9887544322 222222234456778888887766666 567799999999999999999886653 58888888777
Q ss_pred hcc-CCCCEEEEE--cCccchhhhhhcCCCCCcccccccCC-CCCCCCCCHHHHHhhhhh
Q 015614 176 LSH-CQVPIIAYS--VGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKV 231 (403)
Q Consensus 176 ~~~-~~~p~i~~~--MG~~G~~SRil~~~~gs~lty~~~~~-~sApGQ~~~~~l~~~~~~ 231 (403)
+.+ .+.|+-.=+ ..-.+...-+..-.-|....=+++.. +--.||++++++...++.
T Consensus 196 l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g~gertGN~~lE~lv~~L~~ 255 (464)
T 2nx9_A 196 LKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMSGTYGHPATESLVATLQG 255 (464)
T ss_dssp HHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTT
T ss_pred HHHhcCCeEEEEECCCCChHHHHHHHHHHhCCCEEEEeccccCCCCcCHHHHHHHHHHHh
Confidence 543 345532211 22223333333222333333233321 123688888887766653
No 83
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=93.98 E-value=0.048 Score=57.09 Aligned_cols=35 Identities=20% Similarity=0.320 Sum_probs=32.6
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
+++++|+|+|+||.|.+++..|+..|+ +|+|++++
T Consensus 324 L~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D 359 (615)
T 4gsl_A 324 IKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 359 (615)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 467899999999999999999999999 99999986
No 84
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=93.90 E-value=1.2 Score=40.13 Aligned_cols=106 Identities=12% Similarity=0.178 Sum_probs=67.2
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEe-cC--CCCCCC-chHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DC--INNFQP-GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRl-D~--l~~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 87 (403)
+|+-+|..-|..++...++.+.+.|+|++|+|+ |- .+..+. .+.++.+++.++.|+.+.+--. +.+
T Consensus 12 ~i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vn--------d~~-- 81 (230)
T 1rpx_A 12 IVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIV--------EPD-- 81 (230)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESS--------SHH--
T ss_pred EEEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEec--------CHH--
Confidence 478888999998888888888888999999997 42 222221 2567778777677887776422 122
Q ss_pred HHHHHHHHHcCCcEEEEecc--ccch---HHHHHHhccCCCcEEEEecc
Q 015614 88 LEALHLAEDLGADYVDFELK--VASN---ILGKQYSSHQSGTRFIVSCN 131 (403)
Q Consensus 88 ~~ll~~~~~~g~~yvDiEl~--~~~~---~~~~l~~~~~~~~kiI~S~H 131 (403)
+.++.+.+.|+++|=+-.. ..+. ..+.+ ++.+.+++++.+
T Consensus 82 -~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~---~~~g~~ig~~~~ 126 (230)
T 1rpx_A 82 -QRVPDFIKAGADIVSVHCEQSSTIHLHRTINQI---KSLGAKAGVVLN 126 (230)
T ss_dssp -HHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHH---HHTTSEEEEEEC
T ss_pred -HHHHHHHHcCCCEEEEEecCccchhHHHHHHHH---HHcCCcEEEEeC
Confidence 3455667788888755444 2222 22222 223556677765
No 85
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.86 E-value=0.053 Score=49.74 Aligned_cols=38 Identities=21% Similarity=0.303 Sum_probs=34.3
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++++||+|+|.+|...+..|.+.|++|+|++++.
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 35789999999999999999999999999999998764
No 86
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.80 E-value=0.15 Score=50.06 Aligned_cols=54 Identities=28% Similarity=0.451 Sum_probs=44.9
Q ss_pred cHHHHHHHHHHHHHhcCcCCCCCcCCC-CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 338 DCEASITAIEDAIKERGYKNGTASFGS-PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 338 D~~G~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
-+.|....++..+.+.+ . .++||+++|.|.|..|+.++..|.++|++|.+.+++
T Consensus 153 Tg~Gv~~~~~~~~~~~G---------~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~ 207 (355)
T 1c1d_A 153 TAVGVFEAMKATVAHRG---------LGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTD 207 (355)
T ss_dssp HHHHHHHHHHHHHHHTT---------CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred HHHHHHHHHHHHHHhcC---------CCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35688888888776432 3 578999999999999999999999999998888765
No 87
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=93.76 E-value=0.041 Score=51.10 Aligned_cols=39 Identities=23% Similarity=0.217 Sum_probs=32.2
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.+
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 62 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH 62 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 3467899999985 88999999999999999999999864
No 88
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.73 E-value=0.03 Score=48.87 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=33.2
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHC-CCeEEEEecCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~-g~~i~v~nR~~~ 402 (403)
..+++++|+|+|..|+.++..|.+. |.+|++++|+++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 4567899999999999999999999 999999999754
No 89
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=93.72 E-value=0.12 Score=49.10 Aligned_cols=122 Identities=17% Similarity=0.220 Sum_probs=75.7
Q ss_pred HHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCceEEecccch-----HHHHccc------ccCCHHHhhcccee
Q 015614 258 NPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYK-----EAVMKFC------DEVHPLAQAIAAVN 321 (403)
Q Consensus 258 n~~~~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~~------d~~~~~A~~igavN 321 (403)
....+++|+......++. +++.+.++.+ .++.+.|+-|-.|.- +.++..+ |-+++.- +|..
T Consensus 55 ~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n--~g~l- 131 (288)
T 1b0a_A 55 RKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYN--VGRL- 131 (288)
T ss_dssp HHHHHHHTCEECCEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHH--HHHH-
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccc--hhHH-
Confidence 345688999876555532 3566667767 568899999999963 2222222 1111100 0000
Q ss_pred EEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchh-HHHHHHHHHHHCCCeEEEEecC
Q 015614 322 TIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 322 Ti~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGG-aarai~~al~~~g~~i~v~nR~ 400 (403)
... +..+ .-.--.|++..|++. +.+++|++++|+|+|+ +++.++.-|...|+.|++++++
T Consensus 132 --~~g--~~~~--~PcTp~gi~~ll~~~-------------~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 132 --CQR--APRL--RPCTPRGIVTLLERY-------------NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp --HTT--CCSS--CCHHHHHHHHHHHHT-------------TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred --hCC--CCCC--CCCcHHHHHHHHHHc-------------CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 000 0000 112345777776653 2568899999999998 5999999999999999999875
Q ss_pred C
Q 015614 401 F 401 (403)
Q Consensus 401 ~ 401 (403)
.
T Consensus 193 t 193 (288)
T 1b0a_A 193 T 193 (288)
T ss_dssp C
T ss_pred c
Confidence 3
No 90
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=93.61 E-value=0.053 Score=50.48 Aligned_cols=38 Identities=32% Similarity=0.574 Sum_probs=33.4
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+++|+++|-|+ ||.|++++..|++.|++|+++.|+.+
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~ 63 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVA 63 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 467899999985 88999999999999999999999764
No 91
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=93.61 E-value=0.051 Score=51.50 Aligned_cols=39 Identities=26% Similarity=0.310 Sum_probs=34.2
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.+
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 76 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR 76 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3467899999985 88999999999999999999999854
No 92
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=93.59 E-value=0.083 Score=51.41 Aligned_cols=39 Identities=36% Similarity=0.501 Sum_probs=34.9
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.+
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~ 80 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQ 80 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChh
Confidence 3567999999985 89999999999999999999999865
No 93
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=93.55 E-value=0.12 Score=49.46 Aligned_cols=124 Identities=16% Similarity=0.297 Sum_probs=75.4
Q ss_pred HHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCceEEecccchHH----HHcccccCCHHHhhcc---ceeE--EE
Q 015614 259 PTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYKEA----VMKFCDEVHPLAQAIA---AVNT--II 324 (403)
Q Consensus 259 ~~~~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~----v~~~~d~~~~~A~~ig---avNT--i~ 324 (403)
...+++|+......++. +++.+.++.+ .++.+.|+-|-.|.-.. --..++.++|. +.+- -.|. +.
T Consensus 58 k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~-KDVDG~hp~N~G~l~ 136 (301)
T 1a4i_A 58 KAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPE-KDVDGLTSINAGRLA 136 (301)
T ss_dssp HHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGG-GBTTCCSHHHHHHHH
T ss_pred HHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCC-CCccCCChhhHHHHh
Confidence 45678999877655543 3566667777 56889999999987321 11111111111 0000 0011 00
Q ss_pred EeccC--CeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchh-HHHHHHHHHHHCCCeEEEEecC
Q 015614 325 RRPSD--GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 325 ~~~~~--g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGG-aarai~~al~~~g~~i~v~nR~ 400 (403)
.. + ..+ .-.--.|++..|++. +.+++|++++|+|+|. +++.++.-|...|+.|++++++
T Consensus 137 ~g--~~~~~~--~PcTp~gi~~ll~~~-------------~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 137 RG--DLNDCF--IPCTPKGCLELIKET-------------GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TT--CCSSCC--CCHHHHHHHHHHHTT-------------TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cC--CCCCCc--cCchHHHHHHHHHHc-------------CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 00 0 000 112356777776543 2568899999999997 6999999999999999999764
No 94
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=93.54 E-value=0.12 Score=52.26 Aligned_cols=38 Identities=32% Similarity=0.496 Sum_probs=35.0
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.||+++|+|.|..|++++..|..+|++|++++|++
T Consensus 243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 56789999999999999999999999999999998864
No 95
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=93.48 E-value=0.078 Score=49.11 Aligned_cols=37 Identities=27% Similarity=0.358 Sum_probs=33.0
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 63 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK 63 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 45789999985 88999999999999999999999864
No 96
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.46 E-value=0.039 Score=49.85 Aligned_cols=36 Identities=22% Similarity=0.211 Sum_probs=31.4
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
...++.|+|+|..|++++..|.+.|.+|++++|+.+
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~ 62 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPK 62 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 456899999999999999999999999999999753
No 97
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=93.41 E-value=0.037 Score=51.63 Aligned_cols=37 Identities=30% Similarity=0.462 Sum_probs=33.2
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|+++|.|+ ||.|++++..|.+.|++|++++|+.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~ 64 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA 64 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence 467899999995 8899999999999999999999974
No 98
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.39 E-value=0.053 Score=53.70 Aligned_cols=37 Identities=24% Similarity=0.246 Sum_probs=33.8
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+++++++|+|+|.+|+.++..+..+|++|++++|+++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3578999999999999999999999999999999865
No 99
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=93.27 E-value=0.045 Score=50.59 Aligned_cols=37 Identities=43% Similarity=0.565 Sum_probs=33.1
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|++||.|+ ||.|++++..|.+.|++|++++|+.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 467899999985 8899999999999999999999974
No 100
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.26 E-value=0.048 Score=52.36 Aligned_cols=36 Identities=17% Similarity=0.238 Sum_probs=32.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+++.|||+|.+|++++..|.+.|.+|++++|+++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 346899999999999999999999999999999864
No 101
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.26 E-value=0.12 Score=49.00 Aligned_cols=122 Identities=19% Similarity=0.301 Sum_probs=75.5
Q ss_pred HHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCceEEecccchH-----HHHccc------ccCCHHHhhcccee
Q 015614 258 NPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYKE-----AVMKFC------DEVHPLAQAIAAVN 321 (403)
Q Consensus 258 n~~~~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~-----~v~~~~------d~~~~~A~~igavN 321 (403)
....+++|+......++. +++.+.++.+ .++.+.|+-|-.|.-. .++..+ |-+++.- +|-
T Consensus 54 ~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n--~g~-- 129 (281)
T 2c2x_A 54 HADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTN--LGR-- 129 (281)
T ss_dssp HHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHH--HHH--
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhh--HHH--
Confidence 345688999877655542 3566666666 5688999999999732 222211 1111100 000
Q ss_pred EEEEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhH-HHHHHHHHHHC--CCeEEEEe
Q 015614 322 TIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGA-GRALAFGAKSR--GARVVIFD 398 (403)
Q Consensus 322 Ti~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGa-arai~~al~~~--g~~i~v~n 398 (403)
+... +..+ .-.--.|++..|++. +.+++|++++|+|+|.. ++.++.-|... |+.|++++
T Consensus 130 -l~~g--~~~~--~PcTp~gi~~ll~~~-------------~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h 191 (281)
T 2c2x_A 130 -LVLG--TPAP--LPCTPRGIVHLLRRY-------------DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCH 191 (281)
T ss_dssp -HHHT--CCCC--CCHHHHHHHHHHHHT-------------TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEEC
T ss_pred -HhCC--CCCC--CCChHHHHHHHHHHc-------------CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 0000 0000 112345666766553 24688999999999985 99999999999 78999998
Q ss_pred cCC
Q 015614 399 IDF 401 (403)
Q Consensus 399 R~~ 401 (403)
|+.
T Consensus 192 ~~t 194 (281)
T 2c2x_A 192 TGT 194 (281)
T ss_dssp TTC
T ss_pred Cch
Confidence 864
No 102
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.25 E-value=0.15 Score=50.40 Aligned_cols=36 Identities=25% Similarity=0.262 Sum_probs=33.7
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
.++..+++|+|||-++.+++..|..+|+ +|+++||+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5677899999999999999999999999 89999998
No 103
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=93.21 E-value=0.096 Score=49.46 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=33.9
Q ss_pred CCCCCCeEEEEcch---hHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAG---GAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaG---Gaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++|+++|.|++ |.|++++..|.+.|++|+++.|+.
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34678999999985 899999999999999999999874
No 104
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=93.21 E-value=0.11 Score=49.89 Aligned_cols=39 Identities=33% Similarity=0.308 Sum_probs=35.7
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 178 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPK 178 (311)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 356789999999999999999999999999999999865
No 105
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=93.14 E-value=0.099 Score=50.68 Aligned_cols=39 Identities=23% Similarity=0.320 Sum_probs=35.7
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.++++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 146 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 146 YDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 357789999999999999999999999999999999865
No 106
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=93.13 E-value=1.9 Score=39.85 Aligned_cols=111 Identities=13% Similarity=0.061 Sum_probs=76.0
Q ss_pred CeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecC--C-CCCCC-chHHHHHHhcC-CCcEEEEeecCCCCCCCCCCH
Q 015614 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDC--I-NNFQP-GKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDE 84 (403)
Q Consensus 10 ~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~--l-~~~~~-~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~ 84 (403)
+++|+-||..-|...+..+++...+.|+|.+.+++=- | ++... .+.++.+|+.+ ++|+-+.+-.. +.
T Consensus 27 ~~~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~--------~p 98 (246)
T 3inp_A 27 HIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVK--------PV 98 (246)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECS--------SC
T ss_pred CCeeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeC--------CH
Confidence 3789999999999888888888878899999886521 1 22221 25688888888 89999887742 12
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEecc
Q 015614 85 HKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131 (403)
Q Consensus 85 ~~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H 131 (403)
+.| ++.+++.|+++|-+=....+...+.+...++.+.|+.++.+
T Consensus 99 ~~~---i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvaln 142 (246)
T 3inp_A 99 DAL---IESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALN 142 (246)
T ss_dssp HHH---HHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEEC
T ss_pred HHH---HHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEec
Confidence 333 56678889999988655444333333334456777777765
No 107
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=93.12 E-value=0.098 Score=49.27 Aligned_cols=37 Identities=30% Similarity=0.538 Sum_probs=33.2
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|++||.|+ ||.|++++..|.+.|++|.++.|+.
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 467899999995 8899999999999999999999875
No 108
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=93.10 E-value=0.06 Score=51.02 Aligned_cols=37 Identities=41% Similarity=0.568 Sum_probs=33.3
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~ 65 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQ 65 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 367899999995 8899999999999999999999974
No 109
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=93.09 E-value=0.06 Score=50.39 Aligned_cols=37 Identities=41% Similarity=0.608 Sum_probs=33.2
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~ 63 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDA 63 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 467899999995 8899999999999999999999874
No 110
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=93.02 E-value=0.046 Score=51.31 Aligned_cols=37 Identities=35% Similarity=0.514 Sum_probs=32.7
Q ss_pred CCCCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|+++|.| +||.|++++..|.+.|++|++++|+.
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~ 63 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDG 63 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46789999998 58999999999999999999999974
No 111
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=92.93 E-value=1.9 Score=41.37 Aligned_cols=146 Identities=17% Similarity=0.224 Sum_probs=88.4
Q ss_pred cCCHHHHHHHHHHHHhcCCCEEEEEecCCCCC-C-------CchHH-------HHHHhcCCCcEEEEeecCCCCCCCCCC
Q 015614 19 AQSVEQVLSNMYQAKAEGADVVEIRLDCINNF-Q-------PGKDL-------EIILTKKPLPVLIVYRPKWAGGLYEGD 83 (403)
Q Consensus 19 ~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~-~-------~~~~l-------~~l~~~~~~PiI~T~R~~~eGG~~~~~ 83 (403)
..+.+++++.+++..+.|||+|.+-...-.+- + ..+++ +.+++..+.||- +-|
T Consensus 45 ~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpIS--IDT---------- 112 (314)
T 3tr9_A 45 HLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLIS--VDT---------- 112 (314)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEE--EEC----------
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEE--EeC----------
Confidence 45678899999888999999999987544321 1 12222 333344455543 332
Q ss_pred HHHHHHHHHHHHHcCCcEE-EEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCH--------------hHHHHHHHH
Q 015614 84 EHKRLEALHLAEDLGADYV-DFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSE--------------EDLGYLVSR 148 (403)
Q Consensus 84 ~~~~~~ll~~~~~~g~~yv-DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~--------------~~l~~~~~~ 148 (403)
.+-+.+++|++.|+++| ||--...++.++.+. +.+..+|+. |+ .++|.. +.+.+.+++
T Consensus 113 --~~~~Va~aAl~aGa~iINDVsg~~~~~m~~v~a---~~g~~vVlM-h~-~G~P~tmq~~~~ydvv~ev~~~l~~~i~~ 185 (314)
T 3tr9_A 113 --SRPRVMREAVNTGADMINDQRALQLDDALTTVS---ALKTPVCLM-HF-PSETRKPGSTTHFYFLQSVKKELQESIQR 185 (314)
T ss_dssp --SCHHHHHHHHHHTCCEEEETTTTCSTTHHHHHH---HHTCCEEEE-CC-CCTTCCTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHcCCCEEEECCCCCchHHHHHHH---HhCCeEEEE-CC-CCCCcccccccccchHHHHHHHHHHHHHH
Confidence 23467788899998876 443333333433222 245678875 43 455532 346777888
Q ss_pred HHHcCCCEEEEE-----e---ecCCHhHHHHHHHHhc---cCCCCE
Q 015614 149 MQATGADIIKLV-----F---SVNDITEIARIFQLLS---HCQVPI 183 (403)
Q Consensus 149 ~~~~gadivKia-----~---~~~~~~D~~~ll~~~~---~~~~p~ 183 (403)
+.+.|.+-=+|. - ...+.++++.+++-+. ..+.|+
T Consensus 186 a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~Pv 231 (314)
T 3tr9_A 186 CKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPV 231 (314)
T ss_dssp HHHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCB
T ss_pred HHHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHHHHHhcCCCCE
Confidence 889886422333 2 5677888988887754 346675
No 112
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=92.91 E-value=0.042 Score=51.63 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=30.6
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|+++|.|+ ||.|++++..|.+.|++|++++|+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 67 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRP 67 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 467899999985 8899999999999999999999974
No 113
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=92.89 E-value=5.5 Score=38.41 Aligned_cols=195 Identities=14% Similarity=0.137 Sum_probs=114.3
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEE-ecCCC---------CCCCchHHHHHHhcC-CCcEEEE-eecCCCCCCCCCCHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIR-LDCIN---------NFQPGKDLEIILTKK-PLPVLIV-YRPKWAGGLYEGDEHKRL 88 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElR-lD~l~---------~~~~~~~l~~l~~~~-~~PiI~T-~R~~~eGG~~~~~~~~~~ 88 (403)
+.++.++-++...+.|+|.||+= .|-|. ..++.+.++.+++.. +.|+.+- ++. . .. .
T Consensus 28 ~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~-----~--~~----~ 96 (345)
T 1nvm_A 28 TLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPG-----I--GS----V 96 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBT-----T--BC----H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCC-----c--cc----H
Confidence 34555555556566899999993 11111 112345666666543 5565543 331 1 11 2
Q ss_pred HHHHHHHHcCCcEEEEeccccc-hHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeec--C
Q 015614 89 EALHLAEDLGADYVDFELKVAS-NILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSV--N 164 (403)
Q Consensus 89 ~ll~~~~~~g~~yvDiEl~~~~-~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~--~ 164 (403)
+.++.+.+.|++.|-|-....+ +...+.+ ..++.+..++.+.-+...+ +.+.+.++.+++.++|++++-++=+. .
T Consensus 97 ~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~-~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~ 175 (345)
T 1nvm_A 97 HDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMI-PAEKLAEQGKLMESYGATCIYMADSGGAM 175 (345)
T ss_dssp HHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSS-CHHHHHHHHHHHHHHTCSEEEEECTTCCC
T ss_pred HHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCC-CHHHHHHHHHHHHHCCCCEEEECCCcCcc
Confidence 4678888999998887543321 1222222 2334567888887554333 35779999999999999998888554 3
Q ss_pred CHhHHHHHHHHhcc-C--CCCEEEE------EcCccchhhhhhcCCCCCcccccccCC-CCCCCCCCHHHHHhhhhh
Q 015614 165 DITEIARIFQLLSH-C--QVPIIAY------SVGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKV 231 (403)
Q Consensus 165 ~~~D~~~ll~~~~~-~--~~p~i~~------~MG~~G~~SRil~~~~gs~lty~~~~~-~sApGQ~~~~~l~~~~~~ 231 (403)
++.++.++++.+.+ . +.| +++ +||- ..-+..-..|....=+++.. +...||++++++...++.
T Consensus 176 ~P~~v~~lv~~l~~~~~~~~p-i~~H~Hn~~G~av---An~laA~~aGa~~vd~tv~GlG~~aGN~~le~lv~~L~~ 248 (345)
T 1nvm_A 176 SMNDIRDRMRAFKAVLKPETQ-VGMHAHHNLSLGV---ANSIVAVEEGCDRVDASLAGMGAGAGNAPLEVFIAVAER 248 (345)
T ss_dssp CHHHHHHHHHHHHHHSCTTSE-EEEECBCTTSCHH---HHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCce-EEEEECCCccHHH---HHHHHHHHcCCCEEEecchhccCCccCcCHHHHHHHHHh
Confidence 58888888877643 3 344 444 4433 33333333343333344332 235799999988766653
No 114
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=92.87 E-value=0.94 Score=40.08 Aligned_cols=105 Identities=12% Similarity=0.076 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHH---hcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 015614 24 QVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL---TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGAD 100 (403)
Q Consensus 24 e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~ 100 (403)
+....++.+.+.|+|+|++|.-........+.++.++ +..+.|+++. + .++.+.+.|++
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~---------------~---~~~~a~~~gad 88 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDALFFVD---------------D---RVDVALAVDAD 88 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCEEEEE---------------S---CHHHHHHHTCS
T ss_pred hHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcCCeEEEc---------------C---hHHHHHHcCCC
Confidence 4445556666789999999952221100012223333 2346787763 0 12456678999
Q ss_pred EEEEecc-ccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015614 101 YVDFELK-VASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 101 yvDiEl~-~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia 160 (403)
+|=++.. .+.+..+++ . .+..+.+|.|+ .+++ .++.+.|+|++++-
T Consensus 89 ~v~l~~~~~~~~~~~~~---~-~~~~~~v~~~t------~~e~----~~~~~~g~d~i~~~ 135 (215)
T 1xi3_A 89 GVQLGPEDMPIEVAKEI---A-PNLIIGASVYS------LEEA----LEAEKKGADYLGAG 135 (215)
T ss_dssp EEEECTTSCCHHHHHHH---C-TTSEEEEEESS------HHHH----HHHHHHTCSEEEEE
T ss_pred EEEECCccCCHHHHHHh---C-CCCEEEEecCC------HHHH----HHHHhcCCCEEEEc
Confidence 9977632 222223332 2 45567777763 2343 23456799999973
No 115
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=92.85 E-value=0.12 Score=50.23 Aligned_cols=39 Identities=21% Similarity=0.262 Sum_probs=35.6
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.++++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 160 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 160 TKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKK 198 (333)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCC
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCch
Confidence 357789999999999999999999999999999999865
No 116
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=92.80 E-value=0.058 Score=50.21 Aligned_cols=38 Identities=34% Similarity=0.434 Sum_probs=33.7
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++|+++|.|+ ||.|++++..|.+.|++|.++.|+.
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~ 61 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE 61 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4577899999985 8899999999999999999999874
No 117
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=92.80 E-value=0.084 Score=48.99 Aligned_cols=38 Identities=32% Similarity=0.460 Sum_probs=33.5
Q ss_pred CCCCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+++|+++|.| +||.|++++..|.+.|++|+++.|+.+
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 69 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHP 69 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36789999998 588999999999999999999999764
No 118
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=92.80 E-value=0.12 Score=48.31 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=33.7
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 61 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSL 61 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3467999999995 7899999999999999999999974
No 119
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.79 E-value=0.12 Score=49.64 Aligned_cols=39 Identities=28% Similarity=0.372 Sum_probs=35.7
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDI 176 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 457899999999999999999999999999999999864
No 120
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=92.76 E-value=0.043 Score=51.31 Aligned_cols=38 Identities=39% Similarity=0.562 Sum_probs=33.7
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++|+++|-|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~ 60 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDP 60 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3577899999985 8899999999999999999999874
No 121
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=92.74 E-value=2.6 Score=38.23 Aligned_cols=140 Identities=19% Similarity=0.181 Sum_probs=88.6
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHh---cCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHH
Q 015614 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILT---KKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAED 96 (403)
Q Consensus 20 ~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~---~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~ 96 (403)
.+.+++.+.++++.+.+++.|=+ .+. .+...++ .++++ +.|+=.-+.|- .+.+.+..=.+.|++
T Consensus 16 ~t~~~i~~l~~~a~~~~~~aVcv--------~p~-~v~~~~~~l~~~~v~-v~~vigFP~G~---~~~~~k~~e~~~Ai~ 82 (220)
T 1ub3_A 16 ATLEEVAKAAEEALEYGFYGLCI--------PPS-YVAWVRARYPHAPFR-LVTVVGFPLGY---QEKEVKALEAALACA 82 (220)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEC--------CGG-GHHHHHHHCTTCSSE-EEEEESTTTCC---SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEE--------CHH-HHHHHHHHhCCCCce-EEEEecCCCCC---CchHHHHHHHHHHHH
Confidence 35788888888888888888754 221 3333332 23444 33443323332 234566666789999
Q ss_pred cCCcEEEEeccccc----------hHHHHHHh-ccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEe--e-
Q 015614 97 LGADYVDFELKVAS----------NILGKQYS-SHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF--S- 162 (403)
Q Consensus 97 ~g~~yvDiEl~~~~----------~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~--~- 162 (403)
.|++-||+=++... +.+.++.. .+....|+|+-.-. ++.+++....+-+.+.|||+||--+ .
T Consensus 83 ~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~----l~~e~i~~a~~ia~eaGADfVKTsTGf~~ 158 (220)
T 1ub3_A 83 RGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGY----FSPEEIARLAEAAIRGGADFLKTSTGFGP 158 (220)
T ss_dssp TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG----SCHHHHHHHHHHHHHHTCSEEECCCSSSS
T ss_pred cCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCC----CCHHHHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 99999999665431 12233332 33457888876543 3467788888888899999999884 2
Q ss_pred -cCCHhHHHHHHHHh
Q 015614 163 -VNDITEIARIFQLL 176 (403)
Q Consensus 163 -~~~~~D~~~ll~~~ 176 (403)
..+.+|+..+.+..
T Consensus 159 ~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 159 RGASLEDVALLVRVA 173 (220)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhh
Confidence 23677887766554
No 122
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=92.73 E-value=0.16 Score=49.07 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=35.8
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|+.++|+.+
T Consensus 133 ~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 171 (324)
T 3evt_A 133 STLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGH 171 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred ccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 457899999999999999999999999999999999864
No 123
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=92.72 E-value=0.87 Score=41.61 Aligned_cols=68 Identities=9% Similarity=0.128 Sum_probs=51.4
Q ss_pred CCCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEe-cCC--CCCCC-chHHHHHHhcC-CCcEEEEeecC
Q 015614 7 TKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DCI--NNFQP-GKDLEIILTKK-PLPVLIVYRPK 74 (403)
Q Consensus 7 ~~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRl-D~l--~~~~~-~~~l~~l~~~~-~~PiI~T~R~~ 74 (403)
-..+++|+-||..-|...+..+++.+.+.|+|.+.+++ |-- ++.+. ...++.+|+.+ +.|+.+.+-..
T Consensus 2 ~~~~~~i~pSila~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~ 74 (227)
T 1tqx_A 2 GTLKAIIAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVE 74 (227)
T ss_dssp --CCCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESS
T ss_pred CCCCCeEEeehhcCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEc
Confidence 34678899999999999998888888788999998876 422 22222 25788888888 88999888753
No 124
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=92.70 E-value=0.051 Score=50.90 Aligned_cols=37 Identities=32% Similarity=0.518 Sum_probs=33.1
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..++++++|.|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~ 62 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK 62 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 357899999996 8999999999999999999999974
No 125
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=92.58 E-value=0.14 Score=47.78 Aligned_cols=38 Identities=34% Similarity=0.440 Sum_probs=33.7
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++|+++|-|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 61 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE 61 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3567899999985 8899999999999999999999874
No 126
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.58 E-value=0.12 Score=50.02 Aligned_cols=39 Identities=21% Similarity=0.209 Sum_probs=35.3
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.++++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 189 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQP 189 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 356789999999999999999999999999999998764
No 127
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=92.57 E-value=1.4 Score=40.37 Aligned_cols=108 Identities=12% Similarity=0.072 Sum_probs=74.5
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEe-cCC--CCCCC-chHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DCI--NNFQP-GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRl-D~l--~~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 87 (403)
+|+-||..-|...+..+++.+ +.|+|.+++++ |-- ++.+. ...++.+|+.++.|+.+.+-.. +.+.
T Consensus 2 ~i~pSila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~--------dp~~- 71 (231)
T 3ctl_A 2 KISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVT--------RPQD- 71 (231)
T ss_dssp EEEEBGGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESS--------CGGG-
T ss_pred eEEeehhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEec--------CHHH-
Confidence 478899999998888888887 89999999875 421 22221 2577888887889999998864 1233
Q ss_pred HHHHHHHHHcCCcEEEEeccc-cchHHHHHHhccCCCcEEEEecc
Q 015614 88 LEALHLAEDLGADYVDFELKV-ASNILGKQYSSHQSGTRFIVSCN 131 (403)
Q Consensus 88 ~~ll~~~~~~g~~yvDiEl~~-~~~~~~~l~~~~~~~~kiI~S~H 131 (403)
+++.+++.|+++|-+=... .....+.+...++.+.++.++.+
T Consensus 72 --~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~ln 114 (231)
T 3ctl_A 72 --YIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILN 114 (231)
T ss_dssp --THHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEEC
T ss_pred --HHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEE
Confidence 3467788899999876555 33222222233456778888874
No 128
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=92.50 E-value=1.7 Score=42.31 Aligned_cols=158 Identities=17% Similarity=0.244 Sum_probs=103.7
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015614 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (403)
Q Consensus 20 ~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (403)
.|.++.+.|+....+.|||+|-+-+...+ ..+.+..+++..++|++.-+= | + .++...+++.|+
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~~~---~a~al~~I~~~~~vPlvaDiH-------f--~----~~lal~a~e~G~ 106 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPHKE---DVEALEEIVKKSPMPVIADIH-------F--A----PSYAFLSMEKGV 106 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCSHH---HHHHHHHHHHHCSSCEEEECC-------S--C----HHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCChH---HHHHHHHHHhcCCCCEEEeCC-------C--C----HHHHHHHHHhCC
Confidence 56788999999999999999998776422 246788888889999996532 1 1 134556888898
Q ss_pred cEEEEecccc--chHHHHHH-hccCCCc--EEEEeccCCC---------CCCC--HhHHHHHHHHHHHcCCCEEEEEeec
Q 015614 100 DYVDFELKVA--SNILGKQY-SSHQSGT--RFIVSCNLDC---------ETPS--EEDLGYLVSRMQATGADIIKLVFSV 163 (403)
Q Consensus 100 ~yvDiEl~~~--~~~~~~l~-~~~~~~~--kiI~S~H~f~---------~tp~--~~~l~~~~~~~~~~gadivKia~~~ 163 (403)
|-+-|.-... ++.++++. ..+..++ +|-+.+-..+ .||. .+...+..+.+.++|.+=+++-..+
T Consensus 107 dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~ 186 (366)
T 3noy_A 107 HGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKG 186 (366)
T ss_dssp SEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CeEEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeec
Confidence 8877754332 22333443 2222333 3333332221 2331 2456677888889998888899998
Q ss_pred CCHhHHHHHHHHhc-cCCCCEEEEEcCccchh
Q 015614 164 NDITEIARIFQLLS-HCQVPIIAYSVGERGLV 194 (403)
Q Consensus 164 ~~~~D~~~ll~~~~-~~~~p~i~~~MG~~G~~ 194 (403)
.+..+.....+.+. ..+.|+ .++.++.|..
T Consensus 187 S~v~~~i~ayr~la~~~dyPL-HlGvTEAG~~ 217 (366)
T 3noy_A 187 SDVLQNVRANLIFAERTDVPL-HIGITEAGMG 217 (366)
T ss_dssp SSHHHHHHHHHHHHHHCCCCE-EECCSSCCSH
T ss_pred CChHHHHHHHHHHHhccCCCE-EEccCCCCCC
Confidence 88888877776654 458887 6777776644
No 129
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=92.47 E-value=2 Score=39.56 Aligned_cols=107 Identities=18% Similarity=0.115 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHhcCCCEEEEEecCCC------CCCCc------hHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHH
Q 015614 23 EQVLSNMYQAKAEGADVVEIRLDCIN------NFQPG------KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEA 90 (403)
Q Consensus 23 ~e~~~~~~~~~~~~~D~vElRlD~l~------~~~~~------~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~l 90 (403)
+++...++.++..|+++|-||---.. ..+.. +++..+-+..+.|+|+.-| .+
T Consensus 43 ~~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~---------------~~- 106 (243)
T 3o63_A 43 GDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDR---------------AD- 106 (243)
T ss_dssp CCHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESC---------------HH-
T ss_pred chHHHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCH---------------HH-
Confidence 34666677778899999999975411 01121 2233333456889998633 11
Q ss_pred HHHHHHcCCcEEEEeccccc-hHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015614 91 LHLAEDLGADYVDFELKVAS-NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 91 l~~~~~~g~~yvDiEl~~~~-~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia 160 (403)
.+.+.|++.|=+.-+... ...+++ ...+..|-+|.|+ .+| ..++.+.|+|++.+-
T Consensus 107 --lA~~~gAdGVHLg~~dl~~~~~r~~---~~~~~~iG~S~ht------~~E----a~~A~~~GaDyI~vg 162 (243)
T 3o63_A 107 --IARAAGADVLHLGQRDLPVNVARQI---LAPDTLIGRSTHD------PDQ----VAAAAAGDADYFCVG 162 (243)
T ss_dssp --HHHHHTCSEEEECTTSSCHHHHHHH---SCTTCEEEEEECS------HHH----HHHHHHSSCSEEEEC
T ss_pred --HHHHhCCCEEEecCCcCCHHHHHHh---hCCCCEEEEeCCC------HHH----HHHHhhCCCCEEEEc
Confidence 256679999887654432 222332 2355667779885 233 344556899999984
No 130
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=92.46 E-value=0.081 Score=49.71 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=31.9
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|.++|.|+ ||.|++++..|++.|++|.++.|+.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTR 62 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 356899999985 8899999999999999999999974
No 131
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=92.46 E-value=0.17 Score=47.22 Aligned_cols=38 Identities=42% Similarity=0.581 Sum_probs=33.2
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 65 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD 65 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH
Confidence 3577999999995 8899999999999999999988763
No 132
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=92.45 E-value=0.13 Score=49.86 Aligned_cols=39 Identities=23% Similarity=0.101 Sum_probs=35.4
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 180 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEI 180 (331)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 346789999999999999999999999999999999865
No 133
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.44 E-value=0.048 Score=48.04 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=31.2
Q ss_pred CCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|.| +||.|++++..++..|++|+++.|+.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 578999999 59999999999999999999888864
No 134
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.40 E-value=0.061 Score=50.91 Aligned_cols=37 Identities=27% Similarity=0.445 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~ 60 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNE 60 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 356899999984 8999999999999999999999974
No 135
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=92.38 E-value=0.14 Score=49.14 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=35.7
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPN 176 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 357899999999999999999999999999999999864
No 136
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=92.34 E-value=1 Score=41.22 Aligned_cols=131 Identities=16% Similarity=0.161 Sum_probs=74.1
Q ss_pred HHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecC--CCCCCCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015614 29 MYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPK--WAGGLYEGDEHKRLEALHLAEDLGADYVDFEL 106 (403)
Q Consensus 29 ~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~--~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiEl 106 (403)
++.+.+.|.|.||++.+++.+.+..+.++.+.+..++++....-.. ...+.. .+...+.++.|.++|+.+|=+-.
T Consensus 29 l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~---~~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 29 LPLLAMAGAQRVELREELFAGPPDTEALTAAIQLQGLECVFSSPLELWREDGQL---NPELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp HHHHHHHTCSEEEEEGGGCSSCCCHHHHHHHHHHTTCEEEEEEEEEEECTTSSB---CTTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHcCCCEEEEEHHhcCCCHHHHHHHHHHHHcCCEEEEecchhhcCCchhH---HHHHHHHHHHHHHcCCCEEEEec
Confidence 3444567999999998866542233456666667788766442110 111111 03445678889999999987754
Q ss_pred ccc--chHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeec
Q 015614 107 KVA--SNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSV 163 (403)
Q Consensus 107 ~~~--~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~ 163 (403)
... ...++++. .+.+.++++.+-.|......+.+++..+++...+.+.. +++..=.
T Consensus 106 g~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D~ 164 (264)
T 1yx1_A 106 GLLPEQPDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLAERQQLD-LAMTFDI 164 (264)
T ss_dssp ECCCSSCCHHHHHHHHTTSSCEEEEECCSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEET
T ss_pred CCCCcHHHHHHHHHHHHhcCCEEEEecCCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEeh
Confidence 322 11334443 23345666666555321112345677777776665666 7777533
No 137
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=92.33 E-value=2.2 Score=38.02 Aligned_cols=104 Identities=18% Similarity=0.170 Sum_probs=56.1
Q ss_pred HHHHHHHHHhcCCCEEEEEecCCCCCCC---chHHHHHH---hcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015614 25 VLSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEIIL---TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG 98 (403)
Q Consensus 25 ~~~~~~~~~~~~~D~vElRlD~l~~~~~---~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g 98 (403)
....++.+.+.|+|+|++|.-....... .+.+..++ +..+.|+++. + .++.+.+.|
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~---------------~---~~~~a~~~g 94 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFIVN---------------D---DVELALNLK 94 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEE---------------S---CHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEc---------------C---HHHHHHHcC
Confidence 5555666677899999999433322221 12222333 2346888873 0 123566789
Q ss_pred CcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 99 ADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 99 ~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
+++|=+.-.... ..+++..... ..+-+|.|+ .+++ .++.+.|+|.+++
T Consensus 95 ad~v~l~~~~~~--~~~~~~~~g~-~~~~~s~~t------~~e~----~~a~~~g~d~v~~ 142 (227)
T 2tps_A 95 ADGIHIGQEDAN--AKEVRAAIGD-MILGVSAHT------MSEV----KQAEEDGADYVGL 142 (227)
T ss_dssp CSEEEECTTSSC--HHHHHHHHTT-SEEEEEECS------HHHH----HHHHHHTCSEEEE
T ss_pred CCEEEECCCccC--HHHHHHhcCC-cEEEEecCC------HHHH----HHHHhCCCCEEEE
Confidence 999877543322 2233321122 344455553 2333 3455679999997
No 138
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.33 E-value=0.14 Score=47.55 Aligned_cols=36 Identities=31% Similarity=0.421 Sum_probs=32.5
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~ 66 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV 66 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCh
Confidence 57899999985 8899999999999999999999974
No 139
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=92.32 E-value=0.1 Score=50.88 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=30.3
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEec
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDI 399 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR 399 (403)
++++|+|+|+||.|..++..|...|+ +|+|++.
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~ 68 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDH 68 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEEC
Confidence 46799999999999999999999999 9999954
No 140
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=92.31 E-value=3.9 Score=37.62 Aligned_cols=86 Identities=15% Similarity=0.216 Sum_probs=52.1
Q ss_pred CCeeEEEecc--cCCHHHHHHHHHHHHhcCCCEEEEEecCCCCC------------------CCc---hHHHHHHhcCCC
Q 015614 9 NTTMICAPLM--AQSVEQVLSNMYQAKAEGADVVEIRLDCINNF------------------QPG---KDLEIILTKKPL 65 (403)
Q Consensus 9 ~~~~icv~l~--~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~------------------~~~---~~l~~l~~~~~~ 65 (403)
+++.+...++ .++.++....++.+.+.|+|+||+++-+-.+. +.. +.++.+|+..++
T Consensus 16 ~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~ 95 (262)
T 1rd5_A 16 GKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSC 95 (262)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSS
T ss_pred CCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 4555555554 34458888888888888999999997664321 111 345566667789
Q ss_pred cEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEE
Q 015614 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDF 104 (403)
Q Consensus 66 PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDi 104 (403)
|+++-.+.. ..+...++.+.+.|++.|-+
T Consensus 96 Pv~~m~~~~----------~~~~~~~~~a~~aGadgv~v 124 (262)
T 1rd5_A 96 PVVLLSYYK----------PIMFRSLAKMKEAGVHGLIV 124 (262)
T ss_dssp CEEEECCSH----------HHHSCCTHHHHHTTCCEEEC
T ss_pred CEEEEecCc----------HHHHHHHHHHHHcCCCEEEE
Confidence 988753321 01111122367788886665
No 141
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=92.29 E-value=0.18 Score=47.17 Aligned_cols=38 Identities=24% Similarity=0.421 Sum_probs=33.6
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++++++|.|+ ||.|++++..|.+.|++|++++|+.
T Consensus 22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~ 60 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 60 (302)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3467899999995 8899999999999999999999874
No 142
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.28 E-value=0.13 Score=51.41 Aligned_cols=37 Identities=27% Similarity=0.268 Sum_probs=33.7
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+.+.+++|+|+|.+|++++..+..+|++|++++|+++
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 3568999999999999999999999999999999875
No 143
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=92.27 E-value=0.18 Score=49.12 Aligned_cols=39 Identities=28% Similarity=0.302 Sum_probs=35.8
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 205 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTL 205 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcc
Confidence 457899999999999999999999999999999999865
No 144
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.23 E-value=0.45 Score=47.12 Aligned_cols=112 Identities=18% Similarity=0.272 Sum_probs=66.1
Q ss_pred cCCCceEeecCcccHHHHHHHhc--CCCCceEEecccchHHHHcccccCCHHHhhccceeEEEEeccCCeEEEEeccHHH
Q 015614 264 VNYNGIYVPMFVDDLKKFFSTYS--SPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEA 341 (403)
Q Consensus 264 ~gl~~~y~~~~~~~~~~~~~~~~--~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~igavNTi~~~~~~g~l~G~NTD~~G 341 (403)
-|+|..=..+++.+.++|++.++ .+.|.|+|.--==....++.++++-+. .| +-=+|-|-.|
T Consensus 103 agid~~pi~Ldv~~~dEfv~~v~~~~p~F~~I~lED~~~p~~f~il~~~r~~------~~----------ipvf~DDiqG 166 (398)
T 2a9f_A 103 AGVDAIPIVLDTKDTEEIISIVKALAPTFGGINLEDISAPRCFEIEQRLIKE------CH----------IPVFHDDQHG 166 (398)
T ss_dssp SSCEEEEEECCCCCHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHH------CS----------SCEEEHHHHH
T ss_pred cCCceeeeEeCCCCHHHHHHHHHHcCCceeEeccccCCChHHHHHHHHhhhc------CC----------cceecchhhh
Confidence 36774434456667788766663 378899876421122233333322211 11 1224445444
Q ss_pred H----HHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 342 S----ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 342 ~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
- ..++-..+. . .+..++..+++|+|||-+|-+++.-|..+|+ +|++++|+
T Consensus 167 Ta~V~lAall~al~---l------~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 167 TAIVVLAAIFNSLK---L------LKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp HHHHHHHHHHHHHH---T------TTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHHHHHHHHHH---H------hCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 2 122222222 0 1245667899999999999999999999999 99999986
No 145
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=92.19 E-value=0.17 Score=46.83 Aligned_cols=38 Identities=26% Similarity=0.559 Sum_probs=33.4
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.+|+++|.|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 65 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK 65 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCH
Confidence 3467899999985 8889999999999999999999874
No 146
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=92.17 E-value=0.11 Score=50.33 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=35.1
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+.++++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~ 180 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRK 180 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 56789999999999999999999999999999999864
No 147
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=92.08 E-value=0.37 Score=45.82 Aligned_cols=86 Identities=16% Similarity=0.160 Sum_probs=61.6
Q ss_pred EEEecccCCHHHHHHHHHHHHhcCCC-EEEEEecCCC-----CC--CC---chHHHHHHhcCCCcEEEEeecCCCCCCCC
Q 015614 13 ICAPLMAQSVEQVLSNMYQAKAEGAD-VVEIRLDCIN-----NF--QP---GKDLEIILTKKPLPVLIVYRPKWAGGLYE 81 (403)
Q Consensus 13 icv~l~~~~~~e~~~~~~~~~~~~~D-~vElRlD~l~-----~~--~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~~ 81 (403)
+.+.|.+.+.++...-++.+.+.|+| +||+-+-+=. .+ ++ .+.++.+++..++|+++-++..
T Consensus 96 ~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~------- 168 (311)
T 1jub_A 96 IFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY------- 168 (311)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC-------
T ss_pred EEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC-------
Confidence 46788899999999888888888999 9999653100 00 11 1344555556689999888743
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEe
Q 015614 82 GDEHKRLEALHLAEDLGADYVDFE 105 (403)
Q Consensus 82 ~~~~~~~~ll~~~~~~g~~yvDiE 105 (403)
.+.++..++.+.+.+.|+++|.+-
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEec
Confidence 255667777888889999998874
No 148
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=92.08 E-value=0.19 Score=48.96 Aligned_cols=39 Identities=21% Similarity=0.326 Sum_probs=35.5
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHH-HCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAK-SRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~-~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|. ..|++|++++|+.+
T Consensus 159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~ 198 (348)
T 2w2k_A 159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPA 198 (348)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCC
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCc
Confidence 4577999999999999999999999 99999999999864
No 149
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=92.07 E-value=2.6 Score=38.24 Aligned_cols=126 Identities=8% Similarity=-0.035 Sum_probs=69.8
Q ss_pred eeEEEec---ccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCc---hHHHHHHhcCCCcEEEEeecCCCCCCCCCCH
Q 015614 11 TMICAPL---MAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDE 84 (403)
Q Consensus 11 ~~icv~l---~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~ 84 (403)
-+++++. ...++++.++.+ .+.|.|.||++.+.+...... +.++.+.+..++.+....-.. ..+.
T Consensus 18 ~klg~~~~~~~~~~~~~~l~~~---~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~------~~~~ 88 (257)
T 3lmz_A 18 FHLGMAGYTFVNFDLDTTLKTL---ERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIY------MKSE 88 (257)
T ss_dssp SEEEECGGGGTTSCHHHHHHHH---HHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEE------ECSH
T ss_pred eEEEEEEEeecCCCHHHHHHHH---HHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccc------cCCH
Confidence 4466633 334566666544 567999999998865311112 244444456677655332111 1345
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccccchHHHHHH-hccCCCcEEEEeccCCCCC--CCHhHHHHHHH
Q 015614 85 HKRLEALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCET--PSEEDLGYLVS 147 (403)
Q Consensus 85 ~~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~t--p~~~~l~~~~~ 147 (403)
+...+.++.|.++|+.+|=+.-. .+.++++. .+.+.++++.+-.|+++.+ .+.+++.++++
T Consensus 89 ~~~~~~i~~A~~lGa~~v~~~p~--~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~ 152 (257)
T 3lmz_A 89 EEIDRAFDYAKRVGVKLIVGVPN--YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTK 152 (257)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEC--GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEecCC--HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHH
Confidence 66677888999999999887532 23333443 2233466666666643222 23344444443
No 150
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=92.05 E-value=0.066 Score=50.04 Aligned_cols=37 Identities=24% Similarity=0.411 Sum_probs=31.0
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+.+|.++|.|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRL 62 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 356789999985 8899999999999999999999974
No 151
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=91.98 E-value=0.17 Score=48.24 Aligned_cols=38 Identities=34% Similarity=0.461 Sum_probs=35.2
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+.|+++.|+|.|..|++++..|...|++|+.++|+.+
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 156 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSV 156 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred eeecchheeeccCchhHHHHHHHHhhCcEEEEEecccc
Confidence 46789999999999999999999999999999999864
No 152
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=91.93 E-value=0.19 Score=47.31 Aligned_cols=37 Identities=32% Similarity=0.490 Sum_probs=33.1
Q ss_pred CCCCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|++||.| +||.|++++..|.+.|++|+++.|+.
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~ 68 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQ 68 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46789999999 58899999999999999999999874
No 153
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=91.91 E-value=4.8 Score=37.69 Aligned_cols=85 Identities=16% Similarity=0.178 Sum_probs=54.9
Q ss_pred EEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC---------------------chHHHHHHhc-CCCcEEEEe
Q 015614 14 CAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP---------------------GKDLEIILTK-KPLPVLIVY 71 (403)
Q Consensus 14 cv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~---------------------~~~l~~l~~~-~~~PiI~T~ 71 (403)
.++.-.|+++.....++...+.|+|+|||-+-+-.+.-+ .+.++.+|+. .++|+++-.
T Consensus 25 yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~ 104 (271)
T 3nav_A 25 FVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLM 104 (271)
T ss_dssp EEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 345567889999888888778899999999887543311 1345566665 689987653
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEE
Q 015614 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDF 104 (403)
Q Consensus 72 R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDi 104 (403)
..+. .+... .-++++.+.+.|++.+=+
T Consensus 105 Y~n~---v~~~g---~~~f~~~~~~aGvdGvIi 131 (271)
T 3nav_A 105 YANL---VYARG---IDDFYQRCQKAGVDSVLI 131 (271)
T ss_dssp CHHH---HHHTC---HHHHHHHHHHHTCCEEEE
T ss_pred cCcH---HHHHh---HHHHHHHHHHCCCCEEEE
Confidence 3110 00001 145678888899887554
No 154
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=91.88 E-value=0.14 Score=47.60 Aligned_cols=38 Identities=32% Similarity=0.424 Sum_probs=33.5
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++|.+||-|+ ||.|++++..|++.|++|+++.|+.
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTE 62 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3467899999985 8999999999999999999999874
No 155
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.84 E-value=0.11 Score=53.26 Aligned_cols=38 Identities=32% Similarity=0.502 Sum_probs=34.5
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
...|++++|+|.|+.|+.++..|+..|++|++++|+++
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI 308 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45789999999999999999999999999999998753
No 156
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=91.84 E-value=0.2 Score=47.32 Aligned_cols=37 Identities=27% Similarity=0.534 Sum_probs=33.1
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~ 400 (403)
..+++|.++|.|+ ||.|++++..|++.|++|++++|+
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 3577999999995 889999999999999999999886
No 157
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.81 E-value=2.7 Score=39.06 Aligned_cols=127 Identities=22% Similarity=0.156 Sum_probs=76.0
Q ss_pred HHHHHHHhcCCCEEEEEecCCCCCCCch---HHHHHHh---cCCCcEEEEeecCCCCCCCC--CCHHHHHHHHHHHHHcC
Q 015614 27 SNMYQAKAEGADVVEIRLDCINNFQPGK---DLEIILT---KKPLPVLIVYRPKWAGGLYE--GDEHKRLEALHLAEDLG 98 (403)
Q Consensus 27 ~~~~~~~~~~~D~vElRlD~l~~~~~~~---~l~~l~~---~~~~PiI~T~R~~~eGG~~~--~~~~~~~~ll~~~~~~g 98 (403)
.+++++++.|+|.|-+|+.+= ..+..+ .+..+++ ...+|+|+..+. .|.... .++++-.+..+.+.+.|
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~--~G~~~~~~~s~~~i~~a~~~a~~~G 172 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESFP--RGGKVVNETAPEIVAYAARIALELG 172 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEECC--CSTTCCCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEEEEEEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEeeC--CCCccccCCCHHHHHHHHHHHHHcC
Confidence 345666788999999998433 222222 2233332 348999988654 344332 25555555567888999
Q ss_pred CcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 99 ADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 99 ~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
+|||=+......+.++.+...- +.+.|++|==- ..-+.++..+.+....+.||+-+=+
T Consensus 173 AD~vkt~~~~~~e~~~~~~~~~-~~~pV~asGGi--~~~~~~~~l~~i~~~~~aGA~Gvsv 230 (263)
T 1w8s_A 173 ADAMKIKYTGDPKTFSWAVKVA-GKVPVLMSGGP--KTKTEEDFLKQVEGVLEAGALGIAV 230 (263)
T ss_dssp CSEEEEECCSSHHHHHHHHHHT-TTSCEEEECCS--CCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEcCCCCHHHHHHHHHhC-CCCeEEEEeCC--CCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 9999998532234455555332 22245555211 1114678888888888899984433
No 158
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.79 E-value=0.16 Score=48.95 Aligned_cols=36 Identities=39% Similarity=0.464 Sum_probs=32.4
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+++++|.|+ ||.+++++..++..|++|+++.|+.+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~ 205 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEG 205 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHH
Confidence 4789999998 89999999999999999999998765
No 159
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=91.79 E-value=0.13 Score=47.66 Aligned_cols=37 Identities=27% Similarity=0.343 Sum_probs=33.0
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~ 400 (403)
..+++|+++|.|+ ||.|++++..|.+.|++|+++.|+
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4567899999995 899999999999999999999985
No 160
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=91.79 E-value=0.21 Score=48.06 Aligned_cols=39 Identities=15% Similarity=0.060 Sum_probs=35.5
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|+.++|+.+
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~ 173 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRK 173 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCC
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCch
Confidence 346789999999999999999999999999999999864
No 161
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=91.73 E-value=0.17 Score=49.01 Aligned_cols=39 Identities=23% Similarity=0.212 Sum_probs=35.5
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 179 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPM 179 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 456789999999999999999999999999999999864
No 162
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.63 E-value=0.2 Score=48.25 Aligned_cols=37 Identities=30% Similarity=0.321 Sum_probs=33.1
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFGT 403 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~k 403 (403)
.|++++|+|+|+.+.+++..++..|++|+++.++.+|
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~ 212 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHK 212 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 5789999999999999999889999999998888764
No 163
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=91.63 E-value=0.21 Score=48.78 Aligned_cols=38 Identities=29% Similarity=0.495 Sum_probs=34.9
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+.|+++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~ 202 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLS 202 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 56799999999999999999999999999999999754
No 164
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=91.59 E-value=0.35 Score=48.55 Aligned_cols=38 Identities=32% Similarity=0.504 Sum_probs=35.0
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.|++++|+|.|-.|++++..|..+|++|++++|++
T Consensus 207 ~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 207 VMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 45789999999999999999999999999999999874
No 165
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=91.58 E-value=0.12 Score=50.26 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=32.0
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+|++++|+|+||.+.+++..++..|++|++++|+.
T Consensus 180 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 180 NCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRRE 214 (366)
T ss_dssp TTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 38999999999999999999998999999999876
No 166
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=91.58 E-value=0.13 Score=49.74 Aligned_cols=39 Identities=21% Similarity=0.328 Sum_probs=35.3
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 180 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRN 180 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 346789999999999999999999999999999999864
No 167
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=91.54 E-value=0.19 Score=49.11 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=31.4
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+|+|+|+|-+|.+++.+|++.|.+|+|+.|..
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999999999999999999999999864
No 168
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=91.52 E-value=0.17 Score=47.11 Aligned_cols=38 Identities=26% Similarity=0.543 Sum_probs=33.3
Q ss_pred CCCCCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++|+++|.| +||.|++++..|.+.|++|+++.|+.
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 63 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANS 63 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 346789999998 58899999999999999999998874
No 169
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=91.50 E-value=0.22 Score=46.60 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=32.3
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~ 400 (403)
.+.+|+++|-|+ ||.|++++..|.+.|++|++++|+
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~ 58 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFG 58 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999985 899999999999999999999984
No 170
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=91.46 E-value=2.4 Score=37.71 Aligned_cols=106 Identities=16% Similarity=0.125 Sum_probs=68.1
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEe-cCC-CCC-CC-chHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DCI-NNF-QP-GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRl-D~l-~~~-~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 87 (403)
+|+-+|..-|..++...++.+.+.|+|.+++|+ |-- ... +. .+.++.+++.++.|+.+.+--. +.+.+
T Consensus 5 ~~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~--------d~~~~ 76 (220)
T 2fli_A 5 KIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVV--------DPERY 76 (220)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESS--------SGGGG
T ss_pred EEEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeec--------CHHHH
Confidence 588888898988888888888888999999994 633 111 11 3567778776677887765422 11222
Q ss_pred HHHHHHHHHcCCcEEEEeccccc---hHHHHHHhccCCCcEEEEecc
Q 015614 88 LEALHLAEDLGADYVDFELKVAS---NILGKQYSSHQSGTRFIVSCN 131 (403)
Q Consensus 88 ~~ll~~~~~~g~~yvDiEl~~~~---~~~~~l~~~~~~~~kiI~S~H 131 (403)
++.+.+.|+++|-+-....+ ...+.+. +.+.+++++.+
T Consensus 77 ---i~~~~~~gad~v~vh~~~~~~~~~~~~~~~---~~g~~i~~~~~ 117 (220)
T 2fli_A 77 ---VEAFAQAGADIMTIHTESTRHIHGALQKIK---AAGMKAGVVIN 117 (220)
T ss_dssp ---HHHHHHHTCSEEEEEGGGCSCHHHHHHHHH---HTTSEEEEEEC
T ss_pred ---HHHHHHcCCCEEEEccCccccHHHHHHHHH---HcCCcEEEEEc
Confidence 36777889999977433222 2223332 23577888874
No 171
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=91.41 E-value=0.19 Score=48.46 Aligned_cols=39 Identities=26% Similarity=0.316 Sum_probs=35.3
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEec-CCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR-~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|++++| +.+
T Consensus 142 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~ 181 (320)
T 1gdh_A 142 EKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRAS 181 (320)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcC
Confidence 357899999999999999999999999999999999 754
No 172
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=91.39 E-value=0.48 Score=47.40 Aligned_cols=53 Identities=32% Similarity=0.435 Sum_probs=43.3
Q ss_pred cHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEE-EEec
Q 015614 338 DCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDI 399 (403)
Q Consensus 338 D~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~-v~nR 399 (403)
-+.|.+..++..+.+.+ ..+++++++|-|.|.+|+.++..|.++|++|. |.++
T Consensus 197 Tg~Gv~~~~~~~~~~~g---------~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 197 AGLGALLVLEALAKRRG---------LDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp HHHHHHHHHHHHHHHHT---------CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred hHHHHHHHHHHHHHhcC---------CCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 35688888877776433 46789999999999999999999999999765 7776
No 173
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.38 E-value=0.48 Score=42.47 Aligned_cols=122 Identities=11% Similarity=0.132 Sum_probs=64.0
Q ss_pred HHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHH---hcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEE
Q 015614 27 SNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL---TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVD 103 (403)
Q Consensus 27 ~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvD 103 (403)
..++.+++.|+|+|++|... .+..+..+.++ +....++|+.-+ .+.+.+.|++.|=
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k~---~~~~~~~~~i~~l~~~~~~~livnd~------------------~~~A~~~gadgvh 75 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKPE---TPAMYSERLLTLIPEKYHRRIVTHEH------------------FYLKEEFNLMGIH 75 (210)
T ss_dssp HHHHHHHHTTCCEEEECCSS---CCHHHHHHHHHHSCGGGGGGEEESSC------------------TTHHHHTTCSEEE
T ss_pred HHHHHHHHCCCCEEEEccCC---CCHHHHHHHHHHHHHHhCCeEEEeCC------------------HHHHHHcCCCEEE
Confidence 55677788999999999432 22222222232 334677776311 1456678899985
Q ss_pred EeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE--EeecCCHh------HHHHHHHH
Q 015614 104 FELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL--VFSVNDIT------EIARIFQL 175 (403)
Q Consensus 104 iEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi--a~~~~~~~------D~~~ll~~ 175 (403)
+.-+..+. ....+..+..|.|+ .+|+ .++. .|+|++++ ++...+.. +...+-.+
T Consensus 76 l~~~~~~~-------~~~~~~~ig~s~~t------~~e~----~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~ 137 (210)
T 3ceu_A 76 LNARNPSE-------PHDYAGHVSCSCHS------VEEV----KNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREA 137 (210)
T ss_dssp CCSSSCSC-------CTTCCSEEEEEECS------HHHH----HTTG-GGSSEEEECCCC---------CCCCHHHHHHH
T ss_pred ECcccccc-------ccccCCEEEEecCC------HHHH----HHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHH
Confidence 53222110 01135567888885 2333 3344 79999997 33233322 22222222
Q ss_pred hcc--CCCCEEEEE
Q 015614 176 LSH--CQVPIIAYS 187 (403)
Q Consensus 176 ~~~--~~~p~i~~~ 187 (403)
... .+.|+++++
T Consensus 138 ~~~~~~~iPviaiG 151 (210)
T 3ceu_A 138 QKAKIIDSKVMALG 151 (210)
T ss_dssp HHTTCSSTTEEEES
T ss_pred HHhcCCCCCEEEEC
Confidence 333 478887764
No 174
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.33 E-value=0.21 Score=46.97 Aligned_cols=36 Identities=33% Similarity=0.443 Sum_probs=32.1
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~ 400 (403)
.+++|++||.|+ ||.|++++..|.+.|++|.++.|+
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999995 889999999999999999998875
No 175
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=91.26 E-value=0.26 Score=47.11 Aligned_cols=38 Identities=21% Similarity=0.197 Sum_probs=34.9
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+.++++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~ 158 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK 158 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 47789999999999999999999999999999999753
No 176
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=91.25 E-value=0.29 Score=47.29 Aligned_cols=39 Identities=26% Similarity=0.387 Sum_probs=35.6
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|+.++|+.+
T Consensus 136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 174 (324)
T 3hg7_A 136 QGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGR 174 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChH
Confidence 457799999999999999999999999999999999853
No 177
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=91.13 E-value=0.28 Score=45.62 Aligned_cols=37 Identities=30% Similarity=0.423 Sum_probs=31.9
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~ 400 (403)
..+++|+++|.|+ ||.|++++..|++.|++|.++.|+
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467899999995 889999999999999998887654
No 178
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=91.03 E-value=0.26 Score=49.55 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.4
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
.++++|||+|-+|.++++.|.+.|.+|+|+.+.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 578999999999999999999999999999765
No 179
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=91.02 E-value=0.16 Score=51.21 Aligned_cols=35 Identities=31% Similarity=0.325 Sum_probs=32.0
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|.++.++++.|.+.|.+|+|+.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 46789999999999999999999999999998853
No 180
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.00 E-value=0.2 Score=48.82 Aligned_cols=36 Identities=25% Similarity=0.394 Sum_probs=32.3
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|++++|+|+||.+.+++..++..|++|+++.|+.+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~ 222 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPS 222 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578999999999999999999999999988888754
No 181
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=90.94 E-value=0.14 Score=48.96 Aligned_cols=35 Identities=26% Similarity=0.294 Sum_probs=31.7
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|.|+ ||.+++++..++..|++|+++.|+.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 180 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD 180 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999997 9999999999999999999988864
No 182
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=90.92 E-value=2 Score=39.98 Aligned_cols=151 Identities=15% Similarity=0.130 Sum_probs=86.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCC-CCCCCCCCHHHHHHHHHHHHHcCC
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKW-AGGLYEGDEHKRLEALHLAEDLGA 99 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~-eGG~~~~~~~~~~~ll~~~~~~g~ 99 (403)
+.+++...++++.+.|++.|=+-.. .+.... ..+.++|+.+=+.- -.|.. .++ ....-.+.+++.|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~~---------~v~~~~-~~~~~liv~~~~~~~~~g~~-~~~-~~~~~ve~Ai~~Ga 106 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQRG---------IAEKYY-DGSVPLILKLNGKTTLYNGE-PVS-VANCSVEEAVSLGA 106 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECHH---------HHHHHC-CSSSCEEEECEECCTTCCSS-CCC-EESSCHHHHHHTTC
T ss_pred chhhHHHHHHHHHhhCCCEEEECHH---------HHHHhh-cCCCcEEEEEeCCCCcCCCC-ccc-hHHHHHHHHHHCCC
Confidence 5666777777888889999876321 333333 34678887665331 11221 122 33344678899999
Q ss_pred cEEEEeccccc----hH---HHHHH-hccCCCcEEEEeccCC----CCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 015614 100 DYVDFELKVAS----NI---LGKQY-SSHQSGTRFIVSCNLD----CETPSEEDLGYLVSRMQATGADIIKLVFSVNDIT 167 (403)
Q Consensus 100 ~yvDiEl~~~~----~~---~~~l~-~~~~~~~kiI~S~H~f----~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~ 167 (403)
+.||+=.+... .. ..++. ..++.+.++|+-.|.- ..-.+.+++.+..+.+.+.|||++|.-+ +.+.+
T Consensus 107 ~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~-~~~~e 185 (263)
T 1w8s_A 107 SAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKY-TGDPK 185 (263)
T ss_dssp SEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEEC-CSSHH
T ss_pred CEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcC-CCCHH
Confidence 99998553221 11 22333 1233467777764421 0001345666667788889999999995 44566
Q ss_pred HHHHHHHHhccCCC-CEEEEE
Q 015614 168 EIARIFQLLSHCQV-PIIAYS 187 (403)
Q Consensus 168 D~~~ll~~~~~~~~-p~i~~~ 187 (403)
++..+.+.. .. |+++.+
T Consensus 186 ~~~~~~~~~---~~~pV~asG 203 (263)
T 1w8s_A 186 TFSWAVKVA---GKVPVLMSG 203 (263)
T ss_dssp HHHHHHHHT---TTSCEEEEC
T ss_pred HHHHHHHhC---CCCeEEEEe
Confidence 655554432 34 766654
No 183
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=90.88 E-value=2.6 Score=38.41 Aligned_cols=112 Identities=11% Similarity=0.075 Sum_probs=73.2
Q ss_pred CCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecC--C-CCCCC-chHHHHHHhc--CCCcEEEEeecCCCCCCCCC
Q 015614 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDC--I-NNFQP-GKDLEIILTK--KPLPVLIVYRPKWAGGLYEG 82 (403)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~--l-~~~~~-~~~l~~l~~~--~~~PiI~T~R~~~eGG~~~~ 82 (403)
++++|+-||..-|...+..+++...+.|+|.+.+.+=- | ++... .+.++.+|+. .++|+-+.+-..
T Consensus 3 ~~~~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~-------- 74 (228)
T 3ovp_A 3 SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVS-------- 74 (228)
T ss_dssp -CCEEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECS--------
T ss_pred CCcEeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeC--------
Confidence 56889999999999888888888878899999885521 1 22221 2567888877 588988877642
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEecc
Q 015614 83 DEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131 (403)
Q Consensus 83 ~~~~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H 131 (403)
+.+. +++.+++.|+++|-+=........+.+...++.+.++.++.+
T Consensus 75 ~p~~---~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~ 120 (228)
T 3ovp_A 75 KPEQ---WVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120 (228)
T ss_dssp CGGG---GHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHH---HHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEc
Confidence 2233 345677889999888654433322222223345667777765
No 184
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=90.88 E-value=0.22 Score=48.24 Aligned_cols=38 Identities=21% Similarity=0.235 Sum_probs=35.1
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.|+++.|+|.|..|++++..|...|++|+.++|+.
T Consensus 141 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~ 178 (330)
T 4e5n_A 141 TGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKA 178 (330)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSC
T ss_pred CccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45689999999999999999999999999999999986
No 185
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.86 E-value=0.28 Score=46.19 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=32.0
Q ss_pred CCCCCeEEEEcc-hh--HHHHHHHHHHHCCCeEEEEecC
Q 015614 365 PLAGRMFVLAGA-GG--AGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 365 ~~~~~~~lilGa-GG--aarai~~al~~~g~~i~v~nR~ 400 (403)
.+++|+++|.|+ || .+++++..|.+.|++|.++.|+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~ 66 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG 66 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 467899999997 34 9999999999999999999887
No 186
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.80 E-value=0.17 Score=47.69 Aligned_cols=36 Identities=25% Similarity=0.277 Sum_probs=32.0
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|++++|+|+ ||.+++++..++..|++|+.+.|+.+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~ 161 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPE 161 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4789999998 99999999999999999999888754
No 187
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=90.79 E-value=3.6 Score=37.39 Aligned_cols=158 Identities=8% Similarity=-0.006 Sum_probs=92.9
Q ss_pred CCCCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHH
Q 015614 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85 (403)
Q Consensus 6 ~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~ 85 (403)
|+. ++.+|+.+-.++.++.+..++.. ...+|++++-+.++....+ +.++.|++..+.++++=+..- +. .+
T Consensus 9 m~~-~~~lilAlD~~~~~~a~~~v~~~-~~~v~~~Kvg~~lf~~~G~-~~v~~l~~~~g~~v~lD~Kl~------Di-pn 78 (228)
T 3m47_A 9 MDV-MNRLILAMDLMNRDDALRVTGEV-REYIDTVKIGYPLVLSEGM-DIIAEFRKRFGCRIIADFKVA------DI-PE 78 (228)
T ss_dssp CCC-GGGEEEECCCCSHHHHHHHHHTT-TTTCSEEEEEHHHHHHHCT-HHHHHHHHHHCCEEEEEEEEC------SC-HH
T ss_pred hhc-CCCeEEEeCCCCHHHHHHHHHHc-CCcccEEEEcHHHHHhcCH-HHHHHHHhcCCCeEEEEEeec------cc-Hh
Confidence 444 67899999999999999888764 3338999998887754333 356677653467888777653 12 11
Q ss_pred HHHHHHHHHHHcCCcEEEEeccccchHHHHHH-hccCCCcEEEE--eccCCCCCCC-HhHHHHHHHHHHHcCCCEEEEEe
Q 015614 86 KRLEALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIV--SCNLDCETPS-EEDLGYLVSRMQATGADIIKLVF 161 (403)
Q Consensus 86 ~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~-~~~~~~~kiI~--S~H~f~~tp~-~~~l~~~~~~~~~~gadivKia~ 161 (403)
--....+.++++|+|+|-+-.....+.++..+ ..+..+.++++ |.-+...... .+......+.+.+.|.|- +++
T Consensus 79 Tv~~~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~G--vV~ 156 (228)
T 3m47_A 79 TNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKN--YVG 156 (228)
T ss_dssp HHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCE--EEC
T ss_pred HHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcE--EEE
Confidence 11234456778999999997665554443333 12222335543 3221100000 122344555666788775 456
Q ss_pred ecCCHhHHHHHHHH
Q 015614 162 SVNDITEIARIFQL 175 (403)
Q Consensus 162 ~~~~~~D~~~ll~~ 175 (403)
.+..++++..+-+.
T Consensus 157 ~at~~~e~~~ir~~ 170 (228)
T 3m47_A 157 PSTRPERLSRLREI 170 (228)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHh
Confidence 66556666555443
No 188
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=90.67 E-value=0.23 Score=46.17 Aligned_cols=37 Identities=35% Similarity=0.579 Sum_probs=32.1
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~ 400 (403)
.++++|+++|.|+ ||.|++++..|.+.|++|.+..|+
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~ 61 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYAS 61 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3567899999985 899999999999999998888773
No 189
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=90.65 E-value=0.24 Score=48.00 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=32.7
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFGT 403 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~k 403 (403)
.|++++|+|+|+.+.+++..++.+|++|+.+.|+.+|
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~ 215 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRK 215 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 4789999999999999998888899999999887664
No 190
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=90.64 E-value=0.27 Score=47.27 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=30.3
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHC-CC-eEEEEecC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSR-GA-RVVIFDID 400 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~-g~-~i~v~nR~ 400 (403)
..++++|+|+|+.|++.+.+|.+. +. +|+|+||+
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 155 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY 155 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc
Confidence 358999999999999999999874 66 89999998
No 191
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=90.56 E-value=7.4 Score=36.27 Aligned_cols=90 Identities=14% Similarity=0.078 Sum_probs=56.0
Q ss_pred CCeeEEEec--ccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC---------------------chHHHHHHhc-CC
Q 015614 9 NTTMICAPL--MAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP---------------------GKDLEIILTK-KP 64 (403)
Q Consensus 9 ~~~~icv~l--~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~---------------------~~~l~~l~~~-~~ 64 (403)
+++.+...| -.|+++.....++...+.|+|+||+-+-+-.+.-+ .+.++.+|+. .+
T Consensus 16 ~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~ 95 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPD 95 (267)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 444444444 45677888888888878999999998877544322 1345566665 78
Q ss_pred CcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEE
Q 015614 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDF 104 (403)
Q Consensus 65 ~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDi 104 (403)
+|+++-.... +.-.--.-++++.+.+.|++.+=+
T Consensus 96 ~Pivlm~Y~n------pv~~~g~e~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 96 MPIGLLLYAN------LVFANGIDEFYTKAQAAGVDSVLI 129 (267)
T ss_dssp CCEEEEECHH------HHHHHCHHHHHHHHHHHTCCEEEE
T ss_pred CCEEEEecCc------HHHHhhHHHHHHHHHHcCCCEEEe
Confidence 9987653311 000000135677888888887554
No 192
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=90.54 E-value=0.25 Score=47.98 Aligned_cols=39 Identities=26% Similarity=0.411 Sum_probs=35.4
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|-|..|++++..|+..|++|+.++|+.+
T Consensus 161 ~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~ 199 (335)
T 2g76_A 161 TELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIIS 199 (335)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSC
T ss_pred cCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 457899999999999999999999999999999999754
No 193
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=90.49 E-value=0.22 Score=47.54 Aligned_cols=36 Identities=47% Similarity=0.781 Sum_probs=32.4
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~ 400 (403)
.+++|+++|.|+ ||.|++++..|.+.|++|++++|+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 467899999985 899999999999999999999886
No 194
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=90.49 E-value=1.3 Score=40.00 Aligned_cols=125 Identities=17% Similarity=0.155 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhcCCCEEEEEecCCCCC-CC---chHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015614 24 QVLSNMYQAKAEGADVVEIRLDCINNF-QP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (403)
Q Consensus 24 e~~~~~~~~~~~~~D~vElRlD~l~~~-~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (403)
+....++.+.+.|+|.++++ |.-... .. .+.++.+++..++|+++. ||.. +.+. .+.+++.|+
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~-~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~------g~i~--~~~~----~~~~~~~Ga 100 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAIL-DITAAPEGRATFIDSVKRVAEAVSIPVLVG------GGVR--SLED----ATTLFRAGA 100 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEE-ECCCCTTTHHHHHHHHHHHHHHCSSCEEEE------SSCC--SHHH----HHHHHHHTC
T ss_pred cHHHHHHHHHHcCCCEEEEE-eCCccccCCcccHHHHHHHHHhcCCCEEEE------CCCC--CHHH----HHHHHHcCC
Confidence 34444555566799999997 332211 11 235566777789999975 3322 2222 245666799
Q ss_pred cEEEEecccc--chHHHHHHhccC-CCcEEEEeccC-----CCCCC-----CHhHHHHHHHHHHHcCCCEEEEEe
Q 015614 100 DYVDFELKVA--SNILGKQYSSHQ-SGTRFIVSCNL-----DCETP-----SEEDLGYLVSRMQATGADIIKLVF 161 (403)
Q Consensus 100 ~yvDiEl~~~--~~~~~~l~~~~~-~~~kiI~S~H~-----f~~tp-----~~~~l~~~~~~~~~~gadivKia~ 161 (403)
+.|.+--... .+...++..... ....+-++.+. .-.+. +..+..+..+++.+.|+|.+.+-.
T Consensus 101 d~V~i~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~ 175 (253)
T 1h5y_A 101 DKVSVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTS 175 (253)
T ss_dssp SEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEE
T ss_pred CEEEEChHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEec
Confidence 9999764332 233333332111 11233333331 00000 112355667778888999998754
No 195
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=90.47 E-value=0.24 Score=47.17 Aligned_cols=36 Identities=33% Similarity=0.546 Sum_probs=31.9
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~ 400 (403)
.+++|++||-|+ ||.|++++..|++.|++|++++|+
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecc
Confidence 367899999985 899999999999999999998775
No 196
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.47 E-value=0.15 Score=49.14 Aligned_cols=36 Identities=33% Similarity=0.416 Sum_probs=31.9
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+++++|+|+||.+.+++..++..|++|+++.|+.+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~ 199 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDE 199 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 478999999999999999999999999999887643
No 197
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=90.43 E-value=0.34 Score=45.24 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=31.2
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEec
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDI 399 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR 399 (403)
.+++|.++|.|+ ||.|++++..|.+.|++|.++.|
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 467899999985 88999999999999999998886
No 198
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=90.41 E-value=2.5 Score=39.27 Aligned_cols=127 Identities=13% Similarity=0.161 Sum_probs=69.1
Q ss_pred CCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHH---hcCCCcEEEEeecCCCCCCCCCCHH
Q 015614 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL---TKKPLPVLIVYRPKWAGGLYEGDEH 85 (403)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~~~ 85 (403)
.+|+|..+-.+++.++....+.+ .|+|+||+-+-....... .+..+. +..+.|++... -|.+ +.+
T Consensus 12 ~~~~~~~t~g~p~~~~~~~~l~~---~Gad~ielg~pr~~~~g~--~~~~~~~~l~~~~~~~~pn~-----~~~~--~~~ 79 (264)
T 1xm3_A 12 QSRLLLGTGKYPSFDIQKEAVAV---SESDILTFAVRRMNIFEA--SQPNFLEQLDLSKYTLLPNT-----AGAS--TAE 79 (264)
T ss_dssp SCCEEEECSCSSCHHHHHHHHHH---HTCSEEEEETTSSTTC---------CTTCCGGGSEEEEEC-----TTCS--SHH
T ss_pred cCCCEEEecCCCCHHHHHHHHHH---cCCeEEEEcccccccCCC--CHHHHHHHHHhcCCeEcCCc-----cccC--CHH
Confidence 46888889999999999865544 599999997643321011 122222 22345555322 2332 445
Q ss_pred HHHHHHHHHHHcC-CcEEEEecccc-----c---hHHHHHHhccCCCcEEE-EeccCCCCCCCHhHHHHHHHHHHHcCCC
Q 015614 86 KRLEALHLAEDLG-ADYVDFELKVA-----S---NILGKQYSSHQSGTRFI-VSCNLDCETPSEEDLGYLVSRMQATGAD 155 (403)
Q Consensus 86 ~~~~ll~~~~~~g-~~yvDiEl~~~-----~---~~~~~l~~~~~~~~kiI-~S~H~f~~tp~~~~l~~~~~~~~~~gad 155 (403)
+...+.+.+.+.| .++|-+|+--. + +..+........+..+| .+.|+ .+ ..+++.+.|+|
T Consensus 80 ~~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~------~~----~a~~~~~~gad 149 (264)
T 1xm3_A 80 EAVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDD------VV----LARKLEELGVH 149 (264)
T ss_dssp HHHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSC------HH----HHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCC------HH----HHHHHHHhCCC
Confidence 5556667776664 77776664321 1 12222221112356666 66553 22 34556677999
Q ss_pred EE
Q 015614 156 II 157 (403)
Q Consensus 156 iv 157 (403)
++
T Consensus 150 ~v 151 (264)
T 1xm3_A 150 AI 151 (264)
T ss_dssp CB
T ss_pred EE
Confidence 88
No 199
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=90.39 E-value=7.5 Score=36.68 Aligned_cols=147 Identities=12% Similarity=0.152 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEe-------cCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRL-------DCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHL 93 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRl-------D~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 93 (403)
+.++.+.-++.+.+.|+|.||.=- ..+. +..+.+..+.+..+.|+...++ + .+-++.
T Consensus 28 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~--d~~~~~~~~~~~~~~~~~~l~~----------~----~~~i~~ 91 (302)
T 2ftp_A 28 EVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMA--GSAEVFAGIRQRPGVTYAALAP----------N----LKGFEA 91 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGT--THHHHHHHSCCCTTSEEEEECC----------S----HHHHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEECCCcCcccccccc--CHHHHHHHhhhcCCCEEEEEeC----------C----HHHHHH
Confidence 446666666666778999999864 1111 1112222333333556554432 1 245778
Q ss_pred HHHcCCcEEEEeccccc---------------hHHHHHH-hccCCCcEEEEe------ccCCCCCCCHhHHHHHHHHHHH
Q 015614 94 AEDLGADYVDFELKVAS---------------NILGKQY-SSHQSGTRFIVS------CNLDCETPSEEDLGYLVSRMQA 151 (403)
Q Consensus 94 ~~~~g~~yvDiEl~~~~---------------~~~~~l~-~~~~~~~kiI~S------~H~f~~tp~~~~l~~~~~~~~~ 151 (403)
+++.|++.|.+-....+ +..++.. ..+..+.++-+. ..+...+ +.+++.+.++++.+
T Consensus 92 a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~-~~~~~~~~~~~~~~ 170 (302)
T 2ftp_A 92 ALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDV-DPRQVAWVARELQQ 170 (302)
T ss_dssp HHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCC-CHHHHHHHHHHHHH
T ss_pred HHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCC-CHHHHHHHHHHHHH
Confidence 88999999988433322 1112222 334456666322 1211112 45789999999999
Q ss_pred cCCCEEEEEeec--CCHhHHHHHHHHhccC--CCCEE
Q 015614 152 TGADIIKLVFSV--NDITEIARIFQLLSHC--QVPII 184 (403)
Q Consensus 152 ~gadivKia~~~--~~~~D~~~ll~~~~~~--~~p~i 184 (403)
.|+|.+-++-+. .++.+..++++.+.+. +.|+.
T Consensus 171 ~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~ 207 (302)
T 2ftp_A 171 MGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLA 207 (302)
T ss_dssp TTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEE
T ss_pred cCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEE
Confidence 999999998544 3688888888876543 35654
No 200
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.31 E-value=0.29 Score=51.75 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=30.8
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
...|+|||+|.+|.++++.|++.|.+|+|+.+.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~ 304 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCAD 304 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999884
No 201
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=90.23 E-value=0.13 Score=49.38 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=31.4
Q ss_pred CCCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEe-cCC
Q 015614 366 LAGRMFVLAG-AGGAGRALAFGAKSRGARVVIFD-IDF 401 (403)
Q Consensus 366 ~~~~~~lilG-aGGaarai~~al~~~g~~i~v~n-R~~ 401 (403)
+++|++||.| +||.|++++..|++.|++|+++. |+.
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~ 81 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA 81 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 5688999998 58999999999999999999988 864
No 202
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=90.18 E-value=0.36 Score=47.09 Aligned_cols=38 Identities=29% Similarity=0.359 Sum_probs=35.2
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.|+++.|+|-|..|++++..|...|++|+.++|+.
T Consensus 169 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~ 206 (345)
T 4g2n_A 169 MGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTR 206 (345)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred cccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCC
Confidence 45789999999999999999999999999999999985
No 203
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=90.17 E-value=0.32 Score=45.33 Aligned_cols=38 Identities=18% Similarity=0.171 Sum_probs=32.6
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 78 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ 78 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 3456899999985 8889999999999999999888864
No 204
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=89.97 E-value=0.32 Score=47.76 Aligned_cols=39 Identities=15% Similarity=0.220 Sum_probs=35.2
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCe-EEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~-i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++ |++++|+.+
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~ 199 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQAL 199 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCC
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCcc
Confidence 457899999999999999999999999996 999999763
No 205
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=89.97 E-value=0.33 Score=49.42 Aligned_cols=35 Identities=29% Similarity=0.381 Sum_probs=31.7
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
....++|+|+|-+|.+++..|++.|.+|+|+.|..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc
Confidence 35789999999999999999999999999998763
No 206
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.91 E-value=0.15 Score=48.80 Aligned_cols=36 Identities=31% Similarity=0.385 Sum_probs=32.1
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|++++|.|+ ||.+.+++..++..|++|+++.|+.+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 185 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAE 185 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5889999998 99999999999999999998888753
No 207
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=89.89 E-value=0.48 Score=45.98 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=33.1
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+..+++++|.|+ |+.|++++..|.+.|.+|+++.|+.+
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 64 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN 64 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCc
Confidence 345689999997 88999999999999999999999754
No 208
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=89.86 E-value=0.2 Score=48.57 Aligned_cols=36 Identities=28% Similarity=0.311 Sum_probs=32.0
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+++++|.|+ ||.+++++..++..|++|+++.|+.+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~ 206 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE 206 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChh
Confidence 5789999997 99999999999999999998888643
No 209
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=89.79 E-value=0.35 Score=49.43 Aligned_cols=38 Identities=34% Similarity=0.496 Sum_probs=35.1
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.|+++.|+|.|..|++++..|..+|++|++++|++
T Consensus 273 ~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~ 310 (494)
T 3d64_A 273 VMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDP 310 (494)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCH
T ss_pred cccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45789999999999999999999999999999999975
No 210
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=89.76 E-value=0.76 Score=46.20 Aligned_cols=54 Identities=26% Similarity=0.339 Sum_probs=43.2
Q ss_pred cHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEE-EEecC
Q 015614 338 DCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDID 400 (403)
Q Consensus 338 D~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~-v~nR~ 400 (403)
-++|.+..++..+.+.+ .++++++++|.|.|.+|+.++.-|.++|++|. |.+++
T Consensus 214 Tg~Gv~~~~~~~~~~~g---------~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~ 268 (440)
T 3aog_A 214 TGRGVFITAAAAAEKIG---------LQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHT 268 (440)
T ss_dssp HHHHHHHHHHHHHHHHT---------CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred hHHHHHHHHHHHHHhcC---------CCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 35688888877776433 46789999999999999999999999999654 77653
No 211
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=89.74 E-value=0.28 Score=48.85 Aligned_cols=34 Identities=38% Similarity=0.509 Sum_probs=30.5
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
...++|||+|-++.++++.|++.|.+|+|+.|..
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3579999999999999999999999999998864
No 212
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=89.73 E-value=0.39 Score=45.66 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=30.9
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.++++++|.|+ |+.|++++..|.+.|.+|+++.|+.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 45789999997 8899999999999999999998853
No 213
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.65 E-value=0.24 Score=47.04 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=31.5
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.++.|+|+|..|++++..|.+.|.+|++++|+.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 6799999999999999999999999999999865
No 214
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.65 E-value=0.3 Score=47.61 Aligned_cols=36 Identities=31% Similarity=0.370 Sum_probs=31.7
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|.+++|+|+||.+.+++..++..|++|+++.++.+
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~ 229 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEA 229 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 478999999999999999988889999888887754
No 215
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=89.65 E-value=0.37 Score=47.06 Aligned_cols=38 Identities=26% Similarity=0.289 Sum_probs=35.2
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.|+++.|+|.|..|++++..|...|++|+.++|+.
T Consensus 160 ~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~ 197 (351)
T 3jtm_A 160 YDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQ 197 (351)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSC
T ss_pred ccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCc
Confidence 45789999999999999999999999999999999975
No 216
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=89.57 E-value=0.32 Score=49.56 Aligned_cols=38 Identities=37% Similarity=0.553 Sum_probs=35.1
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.|++++|+|.|..|++++..|..+|++|++++|++
T Consensus 253 ~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~ 290 (479)
T 1v8b_A 253 FLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDP 290 (479)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred cccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCCh
Confidence 45789999999999999999999999999999999875
No 217
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=89.56 E-value=0.17 Score=48.63 Aligned_cols=36 Identities=25% Similarity=0.183 Sum_probs=31.8
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|++++|.|+ ||.+++++..++..|++|+++.|+.+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~ 191 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKE 191 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5789999997 99999999999999999998888643
No 218
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.55 E-value=0.24 Score=47.64 Aligned_cols=36 Identities=36% Similarity=0.432 Sum_probs=32.2
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|++++|.|+ ||.+.+++..++..|++|+++.|+.+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~ 195 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTA 195 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5789999998 99999999999999999988888754
No 219
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.55 E-value=0.38 Score=46.45 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=30.7
Q ss_pred CeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 369 RMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 369 ~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+++||.|+ |+.|++++..|.+.|.+|+++.|+.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~ 63 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 63 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCc
Confidence 68999997 88999999999999999999998753
No 220
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=89.53 E-value=0.2 Score=48.08 Aligned_cols=36 Identities=36% Similarity=0.547 Sum_probs=31.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|++++|.|+||.+.+++..++..|++|+.+.++.+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~ 201 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDA 201 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 578999999999999999988999999988887643
No 221
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=89.52 E-value=0.3 Score=47.58 Aligned_cols=39 Identities=26% Similarity=0.403 Sum_probs=35.5
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|-|..|++++..|...|++|+.++|+.+
T Consensus 144 ~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~ 182 (343)
T 2yq5_A 144 NEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYN 182 (343)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChh
Confidence 356789999999999999999999999999999999864
No 222
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=89.52 E-value=11 Score=35.63 Aligned_cols=141 Identities=13% Similarity=0.091 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHH---hcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHH
Q 015614 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL---TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAED 96 (403)
Q Consensus 20 ~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~ 96 (403)
.+.+++.+.++++.+.|+..|=+. + ..+...+ +.+++++. |+-.=+.|-. +-+.+..=.+.+++
T Consensus 71 ~T~~dI~~lc~eA~~~g~aaVCV~--------P-~~V~~a~~~L~~s~V~V~-tVigFP~G~~---~~~~Kv~Ea~~Ai~ 137 (288)
T 3oa3_A 71 ATGSQIDVLCAEAKEYGFATVCVR--------P-DYVSRAVQYLQGTQVGVT-CVIGFHEGTY---STDQKVSEAKRAMQ 137 (288)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC--------G-GGHHHHHHHTTTSSCEEE-EEESTTTSCS---CHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEC--------H-HHHHHHHHHcCCCCCeEE-EEeCCCCCCC---cHHHHHHHHHHHHH
Confidence 456788888888888888877652 2 1343333 33355554 5532222222 33566666788999
Q ss_pred cCCcEEEEeccccc----------hHHHHHHhc-cCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEe--e-
Q 015614 97 LGADYVDFELKVAS----------NILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF--S- 162 (403)
Q Consensus 97 ~g~~yvDiEl~~~~----------~~~~~l~~~-~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~--~- 162 (403)
.|++-||+=++... +.+..+... +....|+|+--.. .+.+++....+-+.+.|||+||--+ .
T Consensus 138 ~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~----Lt~eei~~A~~ia~eaGADfVKTSTGf~~ 213 (288)
T 3oa3_A 138 NGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ----LTADEIIAGCVLSSLAGADYVKTSTGFNG 213 (288)
T ss_dssp TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG----CCHHHHHHHHHHHHHTTCSEEECCCSSSS
T ss_pred cCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC----CCHHHHHHHHHHHHHcCCCEEEcCCCCCC
Confidence 99999996554421 123333322 2234788886543 2467788888888899999999873 1
Q ss_pred -cCCHhHHHHHHHHhc
Q 015614 163 -VNDITEIARIFQLLS 177 (403)
Q Consensus 163 -~~~~~D~~~ll~~~~ 177 (403)
..+.+|+..+.+...
T Consensus 214 ~GAT~edv~lmr~~v~ 229 (288)
T 3oa3_A 214 PGASIENVSLMSAVCD 229 (288)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 456788866666553
No 223
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=89.46 E-value=0.27 Score=47.15 Aligned_cols=37 Identities=11% Similarity=0.164 Sum_probs=32.4
Q ss_pred CCCeEEEEcch-hHHHHHHHHHHHCCCeEEEEecCCCC
Q 015614 367 AGRMFVLAGAG-GAGRALAFGAKSRGARVVIFDIDFGT 403 (403)
Q Consensus 367 ~~~~~lilGaG-Gaarai~~al~~~g~~i~v~nR~~~k 403 (403)
.|++++|+|+| |.+.+++..++..|++|+++.|+.+|
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~ 181 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKH 181 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTT
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 57899999987 88999998888899999999988764
No 224
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=89.44 E-value=0.28 Score=47.52 Aligned_cols=36 Identities=25% Similarity=0.216 Sum_probs=32.0
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|++++|+|+||.+.+++..++.+|++|+++.++.+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~ 215 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNK 215 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChH
Confidence 578999999999999999888888999988888765
No 225
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.42 E-value=0.27 Score=52.09 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=30.6
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
...|+|||+|.+|.++++.|++.|.+|+|+.+.
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~ 296 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCAD 296 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCC
Confidence 367999999999999999999999999999885
No 226
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=89.38 E-value=0.33 Score=47.04 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=35.5
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|-|..|++++..|...|++|+.++|+.+
T Consensus 137 ~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~ 175 (334)
T 2pi1_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKR 175 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eeccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcc
Confidence 356789999999999999999999999999999999864
No 227
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=89.37 E-value=0.45 Score=45.29 Aligned_cols=35 Identities=17% Similarity=0.126 Sum_probs=31.3
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.++++||.|| |+.|++++..|.+.|.+|+++.|+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689999995 8889999999999999999999864
No 228
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=89.37 E-value=0.44 Score=45.45 Aligned_cols=36 Identities=19% Similarity=0.168 Sum_probs=32.0
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++++|.|+ |+.|++++..|.+.|.+|+++.|+.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFA 61 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 34689999997 8999999999999999999999864
No 229
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=89.26 E-value=0.41 Score=47.52 Aligned_cols=39 Identities=15% Similarity=-0.050 Sum_probs=35.4
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.|+++.|+|.|..|++++..|...|++|++++|+.+
T Consensus 187 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~ 225 (393)
T 2nac_A 187 YDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRL 225 (393)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCcc
Confidence 357899999999999999999999999999999999753
No 230
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=89.25 E-value=0.19 Score=48.43 Aligned_cols=36 Identities=28% Similarity=0.296 Sum_probs=32.3
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
.|++++|+|+|+.+.+++..++..|+ +|+++.|+.+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~ 203 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDF 203 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 68899999999999999999999999 9999988743
No 231
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=89.24 E-value=4.8 Score=36.34 Aligned_cols=90 Identities=14% Similarity=0.222 Sum_probs=55.1
Q ss_pred eeEEEeccc----CCHHHHHHHHHHHHhcCCCEEEEEecCC--CCCCCc---hHHHHHHhcCCCcEEEEeecCCCCCCCC
Q 015614 11 TMICAPLMA----QSVEQVLSNMYQAKAEGADVVEIRLDCI--NNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYE 81 (403)
Q Consensus 11 ~~icv~l~~----~~~~e~~~~~~~~~~~~~D~vElRlD~l--~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~ 81 (403)
..+|..+.+ ...+.-..+++.+.+.|+|.||+-++.- ...+.. +.+..+++..+ |+++-+.- |.+.
T Consensus 54 v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~--e~~~-- 128 (225)
T 1mzh_A 54 VKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIV--ETPY-- 128 (225)
T ss_dssp SEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEEC--CGGG--
T ss_pred CceeeEecCCCCccchhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEE--eCCC--
Confidence 355655433 3344445667777889999999766542 111211 34556666666 87766621 1112
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEe
Q 015614 82 GDEHKRLEALHLAEDLGADYVDFE 105 (403)
Q Consensus 82 ~~~~~~~~ll~~~~~~g~~yvDiE 105 (403)
.++++..++.+.+.+.|+|+|..-
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~ts 152 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTS 152 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC
Confidence 356677888889999999999443
No 232
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.24 E-value=0.24 Score=47.87 Aligned_cols=35 Identities=31% Similarity=0.324 Sum_probs=30.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.|++++|+|+||.+.+++..++.+|++|+++.|+.
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 202 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSP 202 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 47899999999999999998888999988887764
No 233
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=89.23 E-value=0.24 Score=48.18 Aligned_cols=36 Identities=31% Similarity=0.320 Sum_probs=31.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|++++|+|+|+.+.+++..++..|++|+++.++.+
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~ 224 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSRE 224 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCch
Confidence 578999999999999999999999999888887643
No 234
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.08 E-value=0.21 Score=47.82 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=31.9
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCC--eEEEEecCCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~--~i~v~nR~~~ 402 (403)
.+++.|||+|..|.+++..|.+.|. +|++++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 3789999999999999999999998 8999999853
No 235
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=88.91 E-value=0.38 Score=44.90 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=30.0
Q ss_pred CeEEEEcchhHHHHHHHHHHHC-CCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~-g~~i~v~nR~~ 401 (403)
..++|+|+|.++.++++.|++. |.+|+|+.|..
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4799999999999999999997 99999998864
No 236
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=88.84 E-value=0.36 Score=47.03 Aligned_cols=37 Identities=30% Similarity=0.474 Sum_probs=32.4
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFGT 403 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~k 403 (403)
.|++++|+|+|+.+.+++..++.+|+ +|+.+.++.+|
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~ 232 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEK 232 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence 57899999999999999998889999 89988877653
No 237
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=88.83 E-value=0.45 Score=46.06 Aligned_cols=37 Identities=24% Similarity=0.271 Sum_probs=32.6
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCC-CeEEEEecCCC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRG-ARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g-~~i~v~nR~~~ 402 (403)
+++++++|.|| |+.|++++..|.+.| .+|+++.|+.+
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 68 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLS 68 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCC
Confidence 56789999996 889999999999999 89999998753
No 238
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=88.82 E-value=2.6 Score=39.89 Aligned_cols=115 Identities=17% Similarity=0.198 Sum_probs=62.8
Q ss_pred CHHHHHHHHHHHHhcCCCEE-EEE----ecC-CCC---CCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVV-EIR----LDC-INN---FQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~v-ElR----lD~-l~~---~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 91 (403)
+..+..+ .+.+.|+|+| +++ .+- ... ....+.+..+++...+|++.-.|.. . .+..
T Consensus 29 ~~~~~a~---~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g--------~----~~~~ 93 (305)
T 2nv1_A 29 INAEQAK---IAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIG--------H----IVEA 93 (305)
T ss_dssp SSHHHHH---HHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTT--------C----HHHH
T ss_pred CHHHHHH---HHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEeccccc--------c----hHHH
Confidence 4445544 3445799999 775 222 111 1123567778777899999777642 1 1233
Q ss_pred HHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015614 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 92 ~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia 160 (403)
+.+.+.|++.|+.--......+.++...+.-+..++++.|+ .++.. ++.+.|+|++++-
T Consensus 94 ~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~------~~e~~----~a~~~Gad~V~~~ 152 (305)
T 2nv1_A 94 RVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRD------LGEAT----RRIAEGASMLRTK 152 (305)
T ss_dssp HHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESS------HHHHH----HHHHTTCSEEEEC
T ss_pred HHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCC------HHHHH----HHHHCCCCEEEec
Confidence 44556899999721111111111121122346778888875 23332 2336799999884
No 239
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=88.77 E-value=0.36 Score=46.93 Aligned_cols=37 Identities=32% Similarity=0.589 Sum_probs=32.5
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFGT 403 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~k 403 (403)
.|++++|+|+||.+.+++..++.+|+ +|+.+.|+.+|
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~ 228 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence 57899999999999999998889999 89998887653
No 240
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=88.75 E-value=0.71 Score=44.04 Aligned_cols=122 Identities=15% Similarity=0.237 Sum_probs=74.5
Q ss_pred HHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCceEEecccch-----HHHHcccccCCHH--HhhccceeE--E
Q 015614 258 NPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYK-----EAVMKFCDEVHPL--AQAIAAVNT--I 323 (403)
Q Consensus 258 n~~~~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~~d~~~~~--A~~igavNT--i 323 (403)
....+++|+......++. +++.+.++.+ .++.+.|+-|-.|.- +.++..+ +|. +.-+...|. +
T Consensus 75 ~k~c~~vGi~s~~~~lp~~~se~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I---~p~KDVDG~hp~N~G~L 151 (303)
T 4b4u_A 75 GNACRRVGMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAI---SLAKDVDGVTCLGFGRM 151 (303)
T ss_dssp HHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHS---CGGGCTTCCCHHHHHHH
T ss_pred HHHHHHcCCeEEEEecCccCCHHHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhcc---CcccccCccCcchHHHh
Confidence 356788999876555543 3566666667 567899999999963 2232222 111 000000110 0
Q ss_pred EEeccCCeEEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhH-HHHHHHHHHHCCCeEEEEec
Q 015614 324 IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGA-GRALAFGAKSRGARVVIFDI 399 (403)
Q Consensus 324 ~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGa-arai~~al~~~g~~i~v~nR 399 (403)
... +..+ .-.--.|++..|++. +.++.||+++|+|.+.. +|.++.-|.+.|+.|+++.+
T Consensus 152 ~~g--~~~~--~PcTp~gv~~lL~~~-------------~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs 211 (303)
T 4b4u_A 152 AMG--EAAY--GSATPAGIMTILKEN-------------NIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHS 211 (303)
T ss_dssp HTT--CCCC--CCHHHHHHHHHHHHT-------------TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred cCC--CCcc--cCccHHHHHHHHHHH-------------CCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecC
Confidence 000 0000 112236777777653 36789999999996555 99999999999999998864
No 241
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=88.72 E-value=4.9 Score=37.60 Aligned_cols=140 Identities=10% Similarity=0.053 Sum_probs=84.3
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC---chHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHc
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~ 97 (403)
+.+++++.+++..+.|||+|-+....-.+.+. ...++.+++..+.|+.+--. +-+.++++++.
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~--------------~~~v~~aal~a 97 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDST--------------NPDAIEAGLKV 97 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECS--------------CHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCC--------------CHHHHHHHHHh
Confidence 56778888888889999999999987433221 12334455556888754311 34677888888
Q ss_pred --CCcEE-EEecccc--chHHHHHHhccCCCcEEEEeccCCCCCCC-----HhHHHHHHHHHHHcCCCEEEEEe-----e
Q 015614 98 --GADYV-DFELKVA--SNILGKQYSSHQSGTRFIVSCNLDCETPS-----EEDLGYLVSRMQATGADIIKLVF-----S 162 (403)
Q Consensus 98 --g~~yv-DiEl~~~--~~~~~~l~~~~~~~~kiI~S~H~f~~tp~-----~~~l~~~~~~~~~~gadivKia~-----~ 162 (403)
|++.| |+-.... ++..+ +. .+.+..+|+.+-+-.++|. .+.+.+.++.+.+.|.+-=+|.. .
T Consensus 98 ~~Ga~iINdvs~~~d~~~~~~~-~~--a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gf 174 (271)
T 2yci_X 98 HRGHAMINSTSADQWKMDIFFP-MA--KKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILP 174 (271)
T ss_dssp CCSCCEEEEECSCHHHHHHHHH-HH--HHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCC
T ss_pred CCCCCEEEECCCCccccHHHHH-HH--HHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCc
Confidence 98776 5765431 22222 22 2346678887654456775 34467777788887753111332 2
Q ss_pred -cCCHhHHHHHHHHhc
Q 015614 163 -VNDITEIARIFQLLS 177 (403)
Q Consensus 163 -~~~~~D~~~ll~~~~ 177 (403)
..+.+.++.+++-+.
T Consensus 175 igk~~~~~~~~l~~l~ 190 (271)
T 2yci_X 175 VNVAQEHAVEVLETIR 190 (271)
T ss_dssp TTTSTHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHH
Confidence 345666666655543
No 242
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.72 E-value=0.22 Score=47.94 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=32.1
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
.|++++|+|+||.+.+++..++..|+ +|+.+.|+.+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~ 200 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPY 200 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 68899999999999999998889999 9999988643
No 243
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.63 E-value=0.38 Score=46.83 Aligned_cols=37 Identities=30% Similarity=0.536 Sum_probs=32.4
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFGT 403 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~k 403 (403)
.|++++|+|+|+.+.+++..++.+|+ +|+.+.++.+|
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~ 229 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDK 229 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence 57899999999999999998889999 89988887653
No 244
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=88.52 E-value=13 Score=34.00 Aligned_cols=142 Identities=15% Similarity=0.123 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015614 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (403)
Q Consensus 20 ~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (403)
.+.+++.+..+++.+.+++.|=+.--+. .......+.+++++- |+=.=+.|-. +.+.+..=.+.|++.|+
T Consensus 40 ~t~~~i~~lc~eA~~~~~~aVcV~p~~v------~~a~~~L~~s~v~v~-tVigFP~G~~---~~~~Kv~Ea~~Ai~~GA 109 (239)
T 3ngj_A 40 ATEEQIRKLCSEAAEYKFASVCVNPTWV------PLCAELLKGTGVKVC-TVIGFPLGAT---PSEVKAYETKVAVEQGA 109 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGGGH------HHHHHHHTTSSCEEE-EEESTTTCCS---CHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHHHH------HHHHHHhCCCCCeEE-EEeccCCCCC---chHHHHHHHHHHHHcCC
Confidence 4567888888888888888776521111 122233333454444 4432222222 33566666778999999
Q ss_pred cEEEEeccccc----------hHHHHHHhc-cCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE--e--ecC
Q 015614 100 DYVDFELKVAS----------NILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV--F--SVN 164 (403)
Q Consensus 100 ~yvDiEl~~~~----------~~~~~l~~~-~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia--~--~~~ 164 (403)
+-||+=++... +.+..+... +....|+|+---. .+.+++....+-+.+.|||+||-- + -..
T Consensus 110 dEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~----Lt~eei~~a~~ia~~aGADfVKTSTGf~~ggA 185 (239)
T 3ngj_A 110 EEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCY----LTNEEKVEVCKRCVAAGAEYVKTSTGFGTHGA 185 (239)
T ss_dssp SEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGG----SCHHHHHHHHHHHHHHTCSEEECCCSSSSCCC
T ss_pred CEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCC----CCHHHHHHHHHHHHHHCcCEEECCCCCCCCCC
Confidence 99998666531 122333322 2234788886543 256778888888889999999988 2 235
Q ss_pred CHhHHHHHHHH
Q 015614 165 DITEIARIFQL 175 (403)
Q Consensus 165 ~~~D~~~ll~~ 175 (403)
+.+|+..+.+.
T Consensus 186 t~~dv~lmr~~ 196 (239)
T 3ngj_A 186 TPEDVKLMKDT 196 (239)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHh
Confidence 67887666654
No 245
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=88.50 E-value=0.43 Score=46.64 Aligned_cols=37 Identities=22% Similarity=0.352 Sum_probs=34.2
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
..+.|+++.|+|.|..|++++..|...|++|+.++|+
T Consensus 156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~ 192 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRE 192 (352)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSH
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCC
Confidence 4568999999999999999999999999999999986
No 246
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=88.49 E-value=0.44 Score=44.13 Aligned_cols=34 Identities=32% Similarity=0.377 Sum_probs=28.2
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEec
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDI 399 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR 399 (403)
.++|+++|-|+ ||.|++++..|.+.|++|.+..+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEES
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 45899999985 89999999999999998887643
No 247
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=88.49 E-value=0.48 Score=44.01 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=32.5
Q ss_pred CCCCCeEEEEcc---hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGA---GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGa---GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++|+++|.|+ +|.|++++..|.+.|++|+++.|+.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 467899999995 4699999999999999999999875
No 248
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.48 E-value=0.29 Score=47.74 Aligned_cols=37 Identities=41% Similarity=0.563 Sum_probs=32.7
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFGT 403 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~k 403 (403)
.+.+++|+|+|+.+.+++..++.+|+ +|+++.++.+|
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~ 230 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKK 230 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence 57899999999999999998889999 89999887653
No 249
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=88.43 E-value=0.39 Score=48.00 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=30.3
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..++|+|+|.++.++++.|++.|.+|.|+.+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 569999999999999999999999999998764
No 250
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=88.41 E-value=14 Score=37.90 Aligned_cols=147 Identities=15% Similarity=0.078 Sum_probs=92.6
Q ss_pred HHHHHhcCCCEEEEEe----cC---CCCCCCchHHHHHHhc-CCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 015614 29 MYQAKAEGADVVEIRL----DC---INNFQPGKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGAD 100 (403)
Q Consensus 29 ~~~~~~~~~D~vElRl----D~---l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~ 100 (403)
++...+.|.+.||.=- |. +-..++.+.+..+++. .+.++..-+|..+-=|.....++...+.++.+.+.|++
T Consensus 53 a~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd 132 (539)
T 1rqb_A 53 CADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMD 132 (539)
T ss_dssp HHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHHHHhCCCC
Confidence 3344457999999862 32 1122345667777754 35566666676655565455565566778899999999
Q ss_pred EEEEeccccc--hHHHHHHhccCCCcEE--EEeccCCCCCC-CHhHHHHHHHHHHHcCCCEEEEEeecC--CHhHHHHHH
Q 015614 101 YVDFELKVAS--NILGKQYSSHQSGTRF--IVSCNLDCETP-SEEDLGYLVSRMQATGADIIKLVFSVN--DITEIARIF 173 (403)
Q Consensus 101 yvDiEl~~~~--~~~~~l~~~~~~~~ki--I~S~H~f~~tp-~~~~l~~~~~~~~~~gadivKia~~~~--~~~D~~~ll 173 (403)
.|-|=....+ .....+...+..+.++ -+|+=+ .++ +.+.+.++.+++.+.|||++-|+=|.- ++.++.++.
T Consensus 133 ~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~--~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv 210 (539)
T 1rqb_A 133 VFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTI--SPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDII 210 (539)
T ss_dssp EEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCC--STTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHH
T ss_pred EEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeee--CCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHH
Confidence 9887544322 2222222233345555 455543 233 457899999999999999999986653 577877777
Q ss_pred HHhc
Q 015614 174 QLLS 177 (403)
Q Consensus 174 ~~~~ 177 (403)
+.+.
T Consensus 211 ~~l~ 214 (539)
T 1rqb_A 211 KAIK 214 (539)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 251
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=88.40 E-value=0.47 Score=46.72 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.2
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
..++|+|||||-++.++++.|.+.|.+|.|+.+.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4579999999999999999999999999999875
No 252
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=88.35 E-value=0.41 Score=49.27 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=31.1
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
...|+|+|+|.+|.+++..|++.|++|.|+.|..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3579999999999999999999999999999864
No 253
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=88.17 E-value=0.41 Score=45.78 Aligned_cols=36 Identities=22% Similarity=0.475 Sum_probs=29.2
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCC-CeEEEEecCC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRG-ARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g-~~i~v~nR~~ 401 (403)
.++++++|.|+ |+.|++++..|.+.| .+|+++.|+.
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~ 81 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLK 81 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 34688999997 889999999999999 6999998864
No 254
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=88.16 E-value=3.3 Score=39.63 Aligned_cols=87 Identities=15% Similarity=0.093 Sum_probs=59.1
Q ss_pred eEEEecccCC-------HHHHHHHHHHHHhcCCCEEEEEecCCCC--C----CC---chHHHHHHhcC---------CCc
Q 015614 12 MICAPLMAQS-------VEQVLSNMYQAKAEGADVVEIRLDCINN--F----QP---GKDLEIILTKK---------PLP 66 (403)
Q Consensus 12 ~icv~l~~~~-------~~e~~~~~~~~~~~~~D~vElRlD~l~~--~----~~---~~~l~~l~~~~---------~~P 66 (403)
.+.+++.+.+ .+++..-++.+. .|+|+||+-+-+=.. . +. .+.++.+++.. +.|
T Consensus 135 ~~~v~i~~~~~~~i~~~~~~~~~aa~~~~-~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~P 213 (336)
T 1f76_A 135 VLGINIGKNKDTPVEQGKDDYLICMEKIY-AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVP 213 (336)
T ss_dssp EEEEEECCCTTSCGGGTHHHHHHHHHHHG-GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred cEEEEecCCCCCcccccHHHHHHHHHHHh-ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCc
Confidence 5678887766 777777776654 489999997642110 0 00 13455566554 799
Q ss_pred EEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015614 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFEL 106 (403)
Q Consensus 67 iI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiEl 106 (403)
+++-++.. .++++..++.+.+.+.|+|+|++--
T Consensus 214 v~vKi~~~-------~~~~~~~~~a~~l~~~Gvd~i~vsn 246 (336)
T 1f76_A 214 IAVKIAPD-------LSEEELIQVADSLVRHNIDGVIATN 246 (336)
T ss_dssp EEEECCSC-------CCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred eEEEecCC-------CCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 99877632 3566777888899999999999863
No 255
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.14 E-value=0.24 Score=47.36 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=32.2
Q ss_pred CCCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 366 LAGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..|++++|.| +||.+.+++..++..|++|+++.|+.+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 184 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDE 184 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3578999999 799999999999999999988888643
No 256
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=88.05 E-value=0.34 Score=47.08 Aligned_cols=37 Identities=27% Similarity=0.445 Sum_probs=32.0
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFGT 403 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~k 403 (403)
.|++++|+|+|+.+.+++..++.+|+ +|+++.++.+|
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~ 228 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDK 228 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHH
Confidence 57899999999999999988888899 89888877543
No 257
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.03 E-value=0.22 Score=47.66 Aligned_cols=35 Identities=26% Similarity=0.286 Sum_probs=31.5
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|.|+ ||.+++++..++..|++|+++.|+.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~ 180 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE 180 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999995 9999999999999999999988875
No 258
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.00 E-value=0.2 Score=47.75 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=31.8
Q ss_pred CCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+++++|.| +||.+++++..++..|++|+++.|+.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~ 176 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQ 176 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 578999999 699999999999999999999888743
No 259
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=87.94 E-value=6.9 Score=36.23 Aligned_cols=78 Identities=18% Similarity=0.205 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCC----CCCCchHHHHHHhcCCCcEEEEeecCCCCCCC-CCC---H---HHHH
Q 015614 20 QSVEQVLSNMYQAKAEGADVVEIRLDCIN----NFQPGKDLEIILTKKPLPVLIVYRPKWAGGLY-EGD---E---HKRL 88 (403)
Q Consensus 20 ~~~~e~~~~~~~~~~~~~D~vElRlD~l~----~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~-~~~---~---~~~~ 88 (403)
.++++.++ .+.+.|.|.||++.+.+. .....+.++.+.+..++.+....=. +.+ ..+ . +...
T Consensus 36 ~~~~~~l~---~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~----~~~~~~~~~~~~~~~~~~ 108 (296)
T 2g0w_A 36 VSFPKRVK---VAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYI----TQWGTAEDRTAEQQKKEQ 108 (296)
T ss_dssp SCHHHHHH---HHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEECB----CCCSSTTTCCHHHHHHHH
T ss_pred CCHHHHHH---HHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeehhh----hccccCChHHHHHHHHHH
Confidence 35566654 445679999999986331 1122345666666777776543211 112 111 1 1224
Q ss_pred HHHHHHHHcCCcEEEE
Q 015614 89 EALHLAEDLGADYVDF 104 (403)
Q Consensus 89 ~ll~~~~~~g~~yvDi 104 (403)
+.++.|.++|+.+|=+
T Consensus 109 ~~i~~A~~lGa~~v~~ 124 (296)
T 2g0w_A 109 TTFHMARLFGVKHINC 124 (296)
T ss_dssp HHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 5566777888887754
No 260
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=87.91 E-value=0.25 Score=47.45 Aligned_cols=36 Identities=28% Similarity=0.166 Sum_probs=31.8
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+++++|.|+ ||.+++++..++..|++|+.+.|+.+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~ 202 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSED 202 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4789999998 99999999999999999988888643
No 261
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=87.88 E-value=0.5 Score=47.33 Aligned_cols=66 Identities=17% Similarity=0.035 Sum_probs=43.6
Q ss_pred EEEEeccHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcc-hhHHHHHHHHHHH-CCCeEEEEecCCC
Q 015614 332 LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGA-GGAGRALAFGAKS-RGARVVIFDIDFG 402 (403)
Q Consensus 332 l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGa-GGaarai~~al~~-~g~~i~v~nR~~~ 402 (403)
++..++.-.|....+.+...-.... ......+|.+||.|| +|.++|++.+|++ .|++|.+++|+.+
T Consensus 30 ~~~~~a~p~g~~~~v~~qi~y~~~~-----~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~ 97 (422)
T 3s8m_A 30 FICTTTHPLGCERNVLEQIAATRAR-----GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKP 97 (422)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHT-----CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCC
T ss_pred eeeecCCchhHHHHHHHHHHHHhhc-----cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence 5555677677776665432100000 001224789999985 7999999999999 9999999988754
No 262
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=87.84 E-value=0.25 Score=47.77 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=31.8
Q ss_pred CCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+++++|.| +||.+++++..++..|++|+++.|+.+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~ 198 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK 198 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 578999999 699999999999999999998888643
No 263
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=87.82 E-value=0.55 Score=48.29 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=30.4
Q ss_pred CCeEEEEcchhHHHHHHHHHHH---CCCeEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKS---RGARVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~---~g~~i~v~nR~ 400 (403)
.++|+|+|+|-+|.++|.+|++ .|.+|+|+.|.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~ 60 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAP 60 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCC
Confidence 4689999999999999999999 88999999985
No 264
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=87.81 E-value=0.21 Score=46.93 Aligned_cols=36 Identities=22% Similarity=0.413 Sum_probs=31.5
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCC---eEEEEecCC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGA---RVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~---~i~v~nR~~ 401 (403)
+++|+++|.|+ ||.|++++..|.+.|+ +|+++.|+.
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~ 70 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRL 70 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCH
Confidence 46899999995 8899999999998886 899999874
No 265
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=87.80 E-value=0.33 Score=46.91 Aligned_cols=36 Identities=33% Similarity=0.473 Sum_probs=31.5
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
.|++++|+|+|+.+.+++..++.+|+ +|+++.++.+
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 207 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSAT 207 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 47899999999999999998888999 8998887643
No 266
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=87.80 E-value=7.6 Score=35.00 Aligned_cols=146 Identities=14% Similarity=0.130 Sum_probs=76.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEec-C-C-CCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHc
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLD-C-I-NNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD-~-l-~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~ 97 (403)
+..+..+ .+.+.|+|.+.++.. . + ..... +.++.+++..++|+++. ||.. +.+ + ++.+++.
T Consensus 33 d~~~~a~---~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~------ggI~--~~~-~---~~~~l~~ 96 (244)
T 1vzw_A 33 SPLEAAL---AWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMDIKVELS------GGIR--DDD-T---LAAALAT 96 (244)
T ss_dssp CHHHHHH---HHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCSSEEEEE------SSCC--SHH-H---HHHHHHT
T ss_pred CHHHHHH---HHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcCCcEEEE------CCcC--CHH-H---HHHHHHc
Confidence 5555544 445679999999852 1 1 22222 46778888889999984 4432 222 2 4566778
Q ss_pred CCcEEEEecccc--chHHHHHHhccCCCcEEEE--ec-------cCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCH
Q 015614 98 GADYVDFELKVA--SNILGKQYSSHQSGTRFIV--SC-------NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDI 166 (403)
Q Consensus 98 g~~yvDiEl~~~--~~~~~~l~~~~~~~~kiI~--S~-------H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~ 166 (403)
|++.|-+-.... .+...++.... + .++++ +. |.+.+.- +...+..+++.+.|+|.+=+.....+.
T Consensus 97 Gad~V~lg~~~l~~p~~~~~~~~~~-g-~~~~~~l~~~~g~v~~~g~~~~~--~~~~e~~~~~~~~G~~~i~~~~~~~~~ 172 (244)
T 1vzw_A 97 GCTRVNLGTAALETPEWVAKVIAEH-G-DKIAVGLDVRGTTLRGRGWTRDG--GDLYETLDRLNKEGCARYVVTDIAKDG 172 (244)
T ss_dssp TCSEEEECHHHHHCHHHHHHHHHHH-G-GGEEEEEEEETTEECCSSSCCCC--CBHHHHHHHHHHTTCCCEEEEEC----
T ss_pred CCCEEEECchHhhCHHHHHHHHHHc-C-CcEEEEEEccCCEEEEcCcccCC--CCHHHHHHHHHhCCCCEEEEeccCccc
Confidence 999988754332 22333333221 1 33433 33 2222111 134556677777899865333211111
Q ss_pred ----hHHHHHHHHhccCCCCEEEE
Q 015614 167 ----TEIARIFQLLSHCQVPIIAY 186 (403)
Q Consensus 167 ----~D~~~ll~~~~~~~~p~i~~ 186 (403)
-|...+.++....+.|+|+.
T Consensus 173 ~~~g~~~~~~~~i~~~~~ipvia~ 196 (244)
T 1vzw_A 173 TLQGPNLELLKNVCAATDRPVVAS 196 (244)
T ss_dssp ---CCCHHHHHHHHHTCSSCEEEE
T ss_pred ccCCCCHHHHHHHHHhcCCCEEEE
Confidence 13333444444457788764
No 267
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=87.77 E-value=1 Score=44.95 Aligned_cols=52 Identities=25% Similarity=0.360 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEE-EEec
Q 015614 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDI 399 (403)
Q Consensus 339 ~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~-v~nR 399 (403)
+.|.+.++++.+.+.+ .++++++++|.|.|.+|..++.-|.++|++|. |.+.
T Consensus 190 g~Gv~~~~~~~~~~~g---------~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~ 242 (421)
T 1v9l_A 190 GFGVAVATREMAKKLW---------GGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 242 (421)
T ss_dssp HHHHHHHHHHHHHHHH---------SCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHhcC---------CCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4688778777766433 46789999999999999999999999999754 7665
No 268
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=87.77 E-value=0.28 Score=47.26 Aligned_cols=36 Identities=28% Similarity=0.405 Sum_probs=31.5
Q ss_pred CCCeEEEEcch-hHHHHHHHHHHHC-CCeEEEEecCCC
Q 015614 367 AGRMFVLAGAG-GAGRALAFGAKSR-GARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaG-Gaarai~~al~~~-g~~i~v~nR~~~ 402 (403)
.+++++|.|+| |.+++++..++.. |++|+++.|+.+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~ 207 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE 207 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence 57899999998 9999999999988 999988887643
No 269
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=87.74 E-value=7 Score=40.22 Aligned_cols=145 Identities=14% Similarity=0.164 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHhcCCCEEEEEecCCCCCCCc---hHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015614 23 EQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (403)
Q Consensus 23 ~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (403)
.++...++.+++.|+++|-||.--+...+.. +++..+-+..+.|+|+.-|. +.+++.|+
T Consensus 25 ~~l~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~liIND~~------------------dlA~~~gA 86 (540)
T 3nl6_A 25 KTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRI------------------DVAMAIGA 86 (540)
T ss_dssp CCHHHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCEEECSCS------------------HHHHHTTC
T ss_pred chHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEEEEeCcH------------------HHHHHcCC
Confidence 4566677788889999999997655432211 22333335568999985321 24567889
Q ss_pred cEEEEeccccc-hHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcC---CCEEEEE--eecCCHhH-----
Q 015614 100 DYVDFELKVAS-NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATG---ADIIKLV--FSVNDITE----- 168 (403)
Q Consensus 100 ~yvDiEl~~~~-~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~g---adivKia--~~~~~~~D----- 168 (403)
+.|=+.-+... ...++++ .++..|-+|.|+ .+|+ .++.+.| +|++.+- +...+..+
T Consensus 87 dGVHLgq~dl~~~~ar~~l---g~~~iiG~S~ht------~eea----~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~ 153 (540)
T 3nl6_A 87 DGIHVGQDDMPIPMIRKLV---GPDMVIGWSVGF------PEEV----DELSKMGPDMVDYIGVGTLFPTLTKKNPKKAP 153 (540)
T ss_dssp SEEEECTTSSCHHHHHHHH---CTTSEEEEEECS------HHHH----HHHHHTCC--CCEEEESCCSCCCCCC----CC
T ss_pred CEEEEChhhcCHHHHHHHh---CCCCEEEEECCC------HHHH----HHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCC
Confidence 98877654322 2233332 456678889994 3343 4566789 9999982 22222222
Q ss_pred -----HHHHHHHhcc---CCCCEEEEEcCccchhhhhh
Q 015614 169 -----IARIFQLLSH---CQVPIIAYSVGERGLVSQLL 198 (403)
Q Consensus 169 -----~~~ll~~~~~---~~~p~i~~~MG~~G~~SRil 198 (403)
+.++.+...+ .++|+++++==....+.+++
T Consensus 154 ~G~~~l~~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~ 191 (540)
T 3nl6_A 154 MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVL 191 (540)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCEEEEESSCCTTTHHHHH
T ss_pred CCHHHHHHHHHHHHhhccCCCCEEEEcCCCHHHHHHHH
Confidence 2334444322 47899888411233455554
No 270
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=87.74 E-value=3.1 Score=38.94 Aligned_cols=108 Identities=19% Similarity=0.279 Sum_probs=65.7
Q ss_pred HHHHHhcCCCEEEEEecC--CCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEe-
Q 015614 29 MYQAKAEGADVVEIRLDC--INNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFE- 105 (403)
Q Consensus 29 ~~~~~~~~~D~vElRlD~--l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiE- 105 (403)
++.+...||++|.+--|- |.. ..+.+..+|+..++|++.- + |=.++. + ++.+...|+|.|=+=
T Consensus 78 A~~y~~~GA~~isvltd~~~f~G--s~~~l~~ir~~v~lPvl~k-----d---fiid~~---q-v~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 78 AQAYQDGGARIVSVVTEQRRFQG--SLDDLDAVRASVSIPVLRK-----D---FVVQPY---Q-IHEARAHGADMLLLIV 143 (272)
T ss_dssp HHHHHHTTCSEEEEECCGGGHHH--HHHHHHHHHHHCSSCEEEE-----S---CCCSHH---H-HHHHHHTTCSEEEEEG
T ss_pred HHHHHHcCCCEEEEecChhhcCC--CHHHHHHHHHhCCCCEEEC-----c---cccCHH---H-HHHHHHcCCCEEEEec
Confidence 445566799999874331 111 1246777888889999931 2 223322 1 355667899998872
Q ss_pred ccccchHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015614 106 LKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 106 l~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia 160 (403)
-..+.+.++++. ..+.-+..++++.|+ .+|+ +++.+.|+|++.+-
T Consensus 144 a~l~~~~l~~l~~~a~~lGl~~lvev~t------~ee~----~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 144 AALEQSVLVSMLDRTESLGMTALVEVHT------EQEA----DRALKAGAKVIGVN 189 (272)
T ss_dssp GGSCHHHHHHHHHHHHHTTCEEEEEESS------HHHH----HHHHHHTCSEEEEE
T ss_pred ccCCHHHHHHHHHHHHHCCCcEEEEcCC------HHHH----HHHHHCCCCEEEEC
Confidence 233333344444 234457889999996 3444 34446799999886
No 271
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=87.71 E-value=0.37 Score=46.79 Aligned_cols=37 Identities=35% Similarity=0.606 Sum_probs=32.2
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFGT 403 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~k 403 (403)
.|++++|+|+|+.+.+++..++.+|+ +|+.+.++.+|
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~ 227 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 227 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence 57899999999999999998888999 89988877553
No 272
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=87.70 E-value=4.8 Score=38.93 Aligned_cols=88 Identities=19% Similarity=0.285 Sum_probs=55.1
Q ss_pred ecccCCHHHHHHH----HHHHHhcCCCEEEEEecC--C-----CC---C-CC-------------chHHHHHHhcC--CC
Q 015614 16 PLMAQSVEQVLSN----MYQAKAEGADVVEIRLDC--I-----NN---F-QP-------------GKDLEIILTKK--PL 65 (403)
Q Consensus 16 ~l~~~~~~e~~~~----~~~~~~~~~D~vElRlD~--l-----~~---~-~~-------------~~~l~~l~~~~--~~ 65 (403)
.++..++++++.+ ++.+.+.|.|.|||..-+ | .+ . .+ .+.++.+|+.. +.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3444444444333 445567899999999864 1 11 1 11 13445566655 67
Q ss_pred cEEEEeecC--CCCCCCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015614 66 PVLIVYRPK--WAGGLYEGDEHKRLEALHLAEDLGADYVDFEL 106 (403)
Q Consensus 66 PiI~T~R~~--~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiEl 106 (403)
||.+-++.. .+||. +.++..++.+.+.+.|++||++-.
T Consensus 221 pV~vRls~~~~~~~g~---~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGW---SLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp CEEEEEESCCCSTTSC---CHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred eEEEEeccccccCCCC---CHHHHHHHHHHHHHcCCCEEEEec
Confidence 887766643 23442 456778888999999999999864
No 273
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=87.66 E-value=0.53 Score=50.33 Aligned_cols=35 Identities=23% Similarity=0.206 Sum_probs=31.9
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..++++|||+|-++.++++.|++.|.+|+|+.+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 35799999999999999999999999999998853
No 274
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=87.64 E-value=1.4 Score=43.97 Aligned_cols=53 Identities=28% Similarity=0.310 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCcCCCC-CCCCeEEEEcchhHHHHHHHHHHH-CCCeEEEEecC
Q 015614 339 CEASITAIEDAIKERGYKNGTASFGSP-LAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFDID 400 (403)
Q Consensus 339 ~~G~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~lilGaGGaarai~~al~~-~g~~i~v~nR~ 400 (403)
+.|...++++.+.+.+ .. ++++++.|+|.|..|+.++.-|.. +|++|..+++.
T Consensus 191 g~Gv~~~~~~~~~~~G---------~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 191 ARGASYTIREAAKVLG---------WDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp HHHHHHHHHHHHHHTT---------CSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hhHHHHHHHHHHHHhC---------CcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 5687777777766332 45 789999999999999999999999 99987766543
No 275
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=87.62 E-value=0.39 Score=47.14 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=29.8
Q ss_pred CeEEEEcchhHHHHHHHHHHHC--CCeEEEEecC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSR--GARVVIFDID 400 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~--g~~i~v~nR~ 400 (403)
..++|||+|-++.++++.|++. |.+|+|+.+.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 4799999999999999999999 9999999875
No 276
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=87.62 E-value=0.43 Score=50.65 Aligned_cols=35 Identities=26% Similarity=0.309 Sum_probs=31.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..++++|||+|-++.++++.|++.|.+|+|+.++.
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 35789999999999999999999999999999853
No 277
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=87.61 E-value=5.1 Score=38.48 Aligned_cols=80 Identities=19% Similarity=0.221 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhcCCCEEEEEecC--C------C--C-CCC-------------chHHHHHHhcCCCcEEEEeecC--CCC
Q 015614 24 QVLSNMYQAKAEGADVVEIRLDC--I------N--N-FQP-------------GKDLEIILTKKPLPVLIVYRPK--WAG 77 (403)
Q Consensus 24 e~~~~~~~~~~~~~D~vElRlD~--l------~--~-~~~-------------~~~l~~l~~~~~~PiI~T~R~~--~eG 77 (403)
++...++.+.+.|.|.|||-.-+ | + + ..+ .+.++.+|+..+.|+.+-++.. .+|
T Consensus 145 ~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~ 224 (338)
T 1z41_A 145 EFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDK 224 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTT
T ss_pred HHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCC
Confidence 34444555667899999998742 1 1 1 111 1344556666688888777753 233
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015614 78 GLYEGDEHKRLEALHLAEDLGADYVDFEL 106 (403)
Q Consensus 78 G~~~~~~~~~~~ll~~~~~~g~~yvDiEl 106 (403)
|. +.++..++.+.+.+.|++||++--
T Consensus 225 g~---~~~~~~~~a~~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 225 GL---DIADHIGFAKWMKEQGVDLIDCSS 250 (338)
T ss_dssp SC---CHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CC---CHHHHHHHHHHHHHcCCCEEEEec
Confidence 32 456788888999999999999853
No 278
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=87.61 E-value=0.44 Score=48.48 Aligned_cols=33 Identities=33% Similarity=0.383 Sum_probs=30.0
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..++|||+|.++.+++..|++.|.+|.|+.+..
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 469999999999999999999999999998753
No 279
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=87.61 E-value=0.3 Score=47.30 Aligned_cols=36 Identities=42% Similarity=0.556 Sum_probs=30.9
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
.|++++|+|+||.+.+++..++.+|+ +|+++.++.+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 215 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEG 215 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 47899999999999999998899999 4888877643
No 280
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=87.57 E-value=0.27 Score=47.48 Aligned_cols=35 Identities=31% Similarity=0.360 Sum_probs=31.6
Q ss_pred CC--CeEEEEcc-hhHHHHHHHHHHHCCC-eEEEEecCC
Q 015614 367 AG--RMFVLAGA-GGAGRALAFGAKSRGA-RVVIFDIDF 401 (403)
Q Consensus 367 ~~--~~~lilGa-GGaarai~~al~~~g~-~i~v~nR~~ 401 (403)
.+ ++++|.|+ ||.+++++..++..|+ +|+++.|+.
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~ 196 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH 196 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH
Confidence 46 89999998 9999999999999999 999988864
No 281
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=87.55 E-value=0.96 Score=46.84 Aligned_cols=59 Identities=22% Similarity=0.345 Sum_probs=42.5
Q ss_pred CCeEEEEeccHHHHHH--HHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEec
Q 015614 329 DGKLIGYNTDCEASIT--AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI 399 (403)
Q Consensus 329 ~g~l~G~NTD~~G~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR 399 (403)
+|+.+|-.+|-..... .|++.+.+ ......++|||+|.++.+++..|+++|.+|.|+.+
T Consensus 78 ~g~~igG~~~l~~~~~~g~L~~~l~~------------~~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 78 RGKFIGDSQTVLKYYSNDELAGIVNE------------SKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp TTEEEECHHHHHHHHHTTCHHHHHHC------------CSSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEeeehhhhhhhcCcchhhccc------------ccccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 6777775555444433 24444431 12246899999999999999999999999999986
No 282
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=87.52 E-value=20 Score=34.12 Aligned_cols=167 Identities=13% Similarity=0.165 Sum_probs=97.1
Q ss_pred eeEEEecccC------------CHHHHHHHHHHHHhcCCCEEEEEecC-CCCC---CC---chHHHHHHhcCCCcEEEEe
Q 015614 11 TMICAPLMAQ------------SVEQVLSNMYQAKAEGADVVEIRLDC-INNF---QP---GKDLEIILTKKPLPVLIVY 71 (403)
Q Consensus 11 ~~icv~l~~~------------~~~e~~~~~~~~~~~~~D~vElRlD~-l~~~---~~---~~~l~~l~~~~~~PiI~T~ 71 (403)
..|++.+++. |.+|+..+..++.+.||.++=+.+-- -... ++ .+.+..+|+.++..|.+|
T Consensus 8 vIIt~A~tGa~~t~~~~P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~T- 86 (311)
T 3e02_A 8 IIITCAVTGSIHTPTMSPYLPITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTDAILNIT- 86 (311)
T ss_dssp BCEEEECSCSSSCGGGCTTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCCCEEEEC-
T ss_pred EEEEEcCCCCcCCcccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEEC-
Confidence 4567777762 45899999889999999999987764 2211 11 356677887665544344
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeccccch----HHHHHHhccCCCcE-EEEec--cCCCCCCCHhHHHH
Q 015614 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASN----ILGKQYSSHQSGTR-FIVSC--NLDCETPSEEDLGY 144 (403)
Q Consensus 72 R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiEl~~~~~----~~~~l~~~~~~~~k-iI~S~--H~f~~tp~~~~l~~ 144 (403)
+ ||....+.++|++.+.. +.+|..-++.....- ...++...+...-+ .+-.+ ..|.+| .+.+.+
T Consensus 87 -T---gg~~~~~~eerla~~~~---~~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~--~~~i~~ 157 (311)
T 3e02_A 87 -T---GGGLGMSLDERLAPARA---ARPEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNT--FSQIER 157 (311)
T ss_dssp -S---SCSTTCCHHHHHHHHHH---HCCSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCC--HHHHHH
T ss_pred -C---CCCCCCCHHHHHHHHHh---cCCCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCC--HHHHHH
Confidence 3 44444678888776543 468998887544210 00000000000000 00000 012333 357889
Q ss_pred HHHHHHHcCCCEEEEEeecCCHhHHHHHHHHhcc--C-CCCEEEEEcCc
Q 015614 145 LVSRMQATGADIIKLVFSVNDITEIARIFQLLSH--C-QVPIIAYSVGE 190 (403)
Q Consensus 145 ~~~~~~~~gadivKia~~~~~~~D~~~ll~~~~~--~-~~p~i~~~MG~ 190 (403)
+++.|.+.| +|.=...-+..++..+.++..+ . .+..+-+.||-
T Consensus 158 ~~~~~~e~G---i~pE~e~fd~g~l~~~~~l~~~Gl~~~p~~~~~vlGv 203 (311)
T 3e02_A 158 GMTELGASG---TRFEFECYDVGHLYNLAHFVDRKLVEPPFFLQCVFGI 203 (311)
T ss_dssp HHHHHHTTT---CEEEEEECSHHHHHHHHHHHHTTSSCSCEEEEEEECC
T ss_pred HHHHHHHcC---CeEEEEEEcHHHHHHHHHHHHcCCCCCCeEEEEEecC
Confidence 999999988 4666666688888877777543 1 34466677764
No 283
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=87.42 E-value=0.46 Score=49.04 Aligned_cols=34 Identities=32% Similarity=0.530 Sum_probs=30.6
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
...|+|||+|.++.+++..|++.|.+|.|+.+..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~ 159 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEP 159 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3579999999999999999999999999998764
No 284
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=87.41 E-value=0.66 Score=46.20 Aligned_cols=36 Identities=39% Similarity=0.631 Sum_probs=32.5
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++++|+|+|..+|.++.++.++|+++.+++.++
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 468999999999999999999999999988888654
No 285
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=87.39 E-value=0.49 Score=43.62 Aligned_cols=37 Identities=27% Similarity=0.388 Sum_probs=30.0
Q ss_pred CCCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecC
Q 015614 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 364 ~~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~ 400 (403)
....+|.++|.|+ ||.|++++..|.+.|++|.++.|.
T Consensus 21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 4567889999995 889999999999999998888743
No 286
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=87.38 E-value=0.3 Score=47.39 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=31.2
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHC-CCeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~-g~~i~v~nR~~~ 402 (403)
.|++++|+|+||.+.+++..++.. |++|+.+.++.+
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~ 222 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEE 222 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 478999999999999999888888 999888887643
No 287
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=87.35 E-value=0.23 Score=47.39 Aligned_cols=36 Identities=25% Similarity=0.312 Sum_probs=31.6
Q ss_pred CCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|++++|.| +||.+.+++..++..|++|+++.|+.+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 176 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPE 176 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578999999 799999999999999999988887643
No 288
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=87.28 E-value=11 Score=34.43 Aligned_cols=149 Identities=19% Similarity=0.118 Sum_probs=76.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCC----CCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNF----QPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAED 96 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~----~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~ 96 (403)
+..+..+ .+.+.|+|.|+++ |.-... ...+.++.+++..++|+|+. ||..+. ++ ++.+++
T Consensus 31 ~~~~~a~---~~~~~Ga~~i~v~-d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~------ggi~~~-~~-----i~~~~~ 94 (266)
T 2w6r_A 31 LLRDWVV---EVEKRGAGEILLT-SIDRDGTKSGYDTEMIRFVRPLTTLPIIAS------GGAGKM-EH-----FLEAFL 94 (266)
T ss_dssp EHHHHHH---HHHHHTCSEEEEE-ETTTSSCSSCCCHHHHHHHGGGCCSCEEEE------SCCCST-HH-----HHHHHH
T ss_pred CHHHHHH---HHHHCCCCEEEEE-ecCcccCCCcccHHHHHHHHHhcCCCEEEE------CCCCCH-HH-----HHHHHH
Confidence 4445544 4456799999995 543211 12356777877789999983 554322 21 334456
Q ss_pred cCCcEEEEecccc-----chHHHHHHhccCC--CcEEEEeccCC--C-----CCCCH-----hHHHHHHHHHHHcCCCEE
Q 015614 97 LGADYVDFELKVA-----SNILGKQYSSHQS--GTRFIVSCNLD--C-----ETPSE-----EDLGYLVSRMQATGADII 157 (403)
Q Consensus 97 ~g~~yvDiEl~~~-----~~~~~~l~~~~~~--~~kiI~S~H~f--~-----~tp~~-----~~l~~~~~~~~~~gadiv 157 (403)
.|++.|=+--... .+.++++... .+ ..+++++.... + .+..| ....+..+++.+.|++.+
T Consensus 95 ~Gad~v~lg~~~~~~~~~~~~~~~~~~~-~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i 173 (266)
T 2w6r_A 95 AGADKALAASVFHFREIDMRELKEYLKK-HGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEI 173 (266)
T ss_dssp HTCSEEECCCCC------CHHHHHHCC-----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEE
T ss_pred cCCcHhhhhHHHHhCCCCHHHHHHHHHH-cCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEE
Confidence 7888876643322 2334444321 12 23555554320 0 01111 134566677778899876
Q ss_pred EEEeecCC----HhHHHHHHHHhccCCCCEEEE
Q 015614 158 KLVFSVND----ITEIARIFQLLSHCQVPIIAY 186 (403)
Q Consensus 158 Kia~~~~~----~~D~~~ll~~~~~~~~p~i~~ 186 (403)
=+.....+ ..|...+.++....+.|+|+.
T Consensus 174 ~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~ 206 (266)
T 2w6r_A 174 LLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIAS 206 (266)
T ss_dssp EEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEE
T ss_pred EEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEe
Confidence 54322211 123333444444557888764
No 289
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=87.28 E-value=0.6 Score=45.83 Aligned_cols=38 Identities=29% Similarity=0.338 Sum_probs=34.7
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.|+++.|+|-|..|++++..|...|++|+.++|+.
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~ 209 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL 209 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCC
Confidence 45679999999999999999999999999999999874
No 290
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=87.22 E-value=0.37 Score=47.29 Aligned_cols=36 Identities=36% Similarity=0.446 Sum_probs=31.2
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
.|++++|+|+||.+.+++..++.+|+ +|+++.++.+
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~ 221 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPA 221 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHH
Confidence 57899999999999999998888999 7888877643
No 291
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=87.15 E-value=0.49 Score=49.12 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.1
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..|+|+|+|-++.++++.|++.|++|.|+.|..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~ 82 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLV 82 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 469999999999999999999999999999864
No 292
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=87.06 E-value=0.43 Score=49.27 Aligned_cols=33 Identities=33% Similarity=0.494 Sum_probs=30.2
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..|+|||+|.++.++++.|++.|.+|.|+.+..
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999998754
No 293
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=87.04 E-value=0.59 Score=44.19 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=30.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFGT 403 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~k 403 (403)
.|++++|+|+|+.+.+++..++..|++|+.+. +.+|
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~ 177 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLS 177 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-Chhh
Confidence 58899999999999999998888999888777 5543
No 294
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=86.97 E-value=8.6 Score=37.21 Aligned_cols=83 Identities=20% Similarity=0.180 Sum_probs=53.5
Q ss_pred EEEecccCCHHHHHHHHHHHHhcCCC-EEEEEecCCC-----CC--CC---chHHHHHHhcCCCcEEEEeecCCCCCCCC
Q 015614 13 ICAPLMAQSVEQVLSNMYQAKAEGAD-VVEIRLDCIN-----NF--QP---GKDLEIILTKKPLPVLIVYRPKWAGGLYE 81 (403)
Q Consensus 13 icv~l~~~~~~e~~~~~~~~~~~~~D-~vElRlD~l~-----~~--~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~~ 81 (403)
+.++|.+.+.++...-++...+.++| +||+=+=+=. .+ ++ .+.+..+++..++|+++-+|..
T Consensus 131 vivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~------- 203 (345)
T 3oix_A 131 HFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPY------- 203 (345)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC-------
T ss_pred EEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCC-------
Confidence 56899999999998877776556766 9999875411 01 11 1233344455689999999963
Q ss_pred CCHHHHHHHHHHHHHcCCcEE
Q 015614 82 GDEHKRLEALHLAEDLGADYV 102 (403)
Q Consensus 82 ~~~~~~~~ll~~~~~~g~~yv 102 (403)
.+.++..++++.+-..+++++
T Consensus 204 ~~~~~~a~~~~~aga~~i~~i 224 (345)
T 3oix_A 204 FDIVHFDQAAAIFNXYPLTFV 224 (345)
T ss_dssp CCHHHHHHHHHHHTTSCCSEE
T ss_pred CCHHHHHHHHHHhCCCceEEE
Confidence 255666666666655555543
No 295
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=86.94 E-value=0.78 Score=45.28 Aligned_cols=37 Identities=30% Similarity=0.404 Sum_probs=33.9
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
..+.|+++.|+|.|..|++++..|...|++|++++|+
T Consensus 112 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~ 148 (380)
T 2o4c_A 112 ADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPP 148 (380)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHH
T ss_pred cccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3567999999999999999999999999999999875
No 296
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=86.85 E-value=0.38 Score=46.86 Aligned_cols=35 Identities=26% Similarity=0.273 Sum_probs=31.0
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~ 401 (403)
.|++++|+|+|+.+.+++..++.+|+ +|+++.++.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~ 217 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQA 217 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 47899999999999999998899999 888887764
No 297
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=86.84 E-value=0.4 Score=45.86 Aligned_cols=37 Identities=27% Similarity=0.294 Sum_probs=31.0
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
..+++++|.|+||.+..++..++.+|+ .|.++.++.+
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~ 196 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSE 196 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHH
Confidence 358899999999999999998999999 6677776543
No 298
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=86.82 E-value=0.53 Score=48.06 Aligned_cols=34 Identities=26% Similarity=0.225 Sum_probs=31.1
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++|||+|-+|.++++.|++.|.+|+|+.+..
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4679999999999999999999999999999864
No 299
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=86.81 E-value=0.54 Score=48.64 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=31.2
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHC--CCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~--g~~i~v~nR~~ 401 (403)
..++++|||+|-+|.++++.|.+. |.+|+|+.|..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 357899999999999999999988 67999999864
No 300
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=86.80 E-value=21 Score=33.68 Aligned_cols=144 Identities=14% Similarity=0.168 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCC----CCCchHHH-------HHHhcCCCcEEEEeecCCCCCCCCCCHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINN----FQPGKDLE-------IILTKKPLPVLIVYRPKWAGGLYEGDEHKRLE 89 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~----~~~~~~l~-------~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (403)
+.+++++.+++..+.|||+|.+-...-.+ .+..+.+. .+++..+.|+.+--. +-+
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~--------------~~~ 126 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTY--------------KAE 126 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECS--------------CHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCC--------------CHH
Confidence 36788888888889999999998866422 22223333 333445778654321 345
Q ss_pred HHHHHHHcCCcEE-EEeccc-cchHHHHHHhccCCCcEEEEeccCCCCCCC--------HhHHHHHHHHHHHcCCCEEEE
Q 015614 90 ALHLAEDLGADYV-DFELKV-ASNILGKQYSSHQSGTRFIVSCNLDCETPS--------EEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 90 ll~~~~~~g~~yv-DiEl~~-~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~--------~~~l~~~~~~~~~~gadivKi 159 (403)
.++++++.|++.| |+-... .++..+.+. +.+..+|+.+ . .++|. .+.+.+.++.+.+.|.+-=+|
T Consensus 127 V~~aAl~aGa~iINdvsg~~~d~~m~~~aa---~~g~~vVlmh-~-~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~I 201 (297)
T 1tx2_A 127 VAKQAIEAGAHIINDIWGAKAEPKIAEVAA---HYDVPIILMH-N-RDNMNYRNLMADMIADLYDSIKIAKDAGVRDENI 201 (297)
T ss_dssp HHHHHHHHTCCEEEETTTTSSCTHHHHHHH---HHTCCEEEEC-C-CSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHcCCCEEEECCCCCCCHHHHHHHH---HhCCcEEEEe-C-CCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcE
Confidence 7788888898887 444332 333333222 2456777774 3 56776 255777888888888542235
Q ss_pred Eee-----cCCHhHHHHHHHHhccC---CCCE
Q 015614 160 VFS-----VNDITEIARIFQLLSHC---QVPI 183 (403)
Q Consensus 160 a~~-----~~~~~D~~~ll~~~~~~---~~p~ 183 (403)
..= ..+.++++.+++-+... +.|+
T Consensus 202 ilDPg~Gfgk~~~~n~~ll~~l~~l~~lg~Pv 233 (297)
T 1tx2_A 202 ILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPV 233 (297)
T ss_dssp EEECCTTSSCCHHHHHHHHHTGGGGGGGCSCB
T ss_pred EEeCCCCcCCCHHHHHHHHHHHHHHHhCCCCE
Confidence 543 46788888888776543 5564
No 301
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=86.73 E-value=0.43 Score=48.37 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=32.2
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
-+++.|||+|-++.+++..|++.|.+|++++|+++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 37899999999999999999999999999999854
No 302
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=86.63 E-value=0.32 Score=46.77 Aligned_cols=36 Identities=17% Similarity=0.089 Sum_probs=31.3
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHC--CCeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~--g~~i~v~nR~~~ 402 (403)
.|++++|+|+|+.+.+++..++.+ |++|+.+.++.+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~ 207 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKK 207 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHH
Confidence 688999999999999999888888 999888887643
No 303
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.60 E-value=0.34 Score=49.01 Aligned_cols=35 Identities=26% Similarity=0.274 Sum_probs=31.9
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
-+++.|||+|-+|.+++..|++.|.+|++++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999999753
No 304
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=86.56 E-value=0.34 Score=47.66 Aligned_cols=36 Identities=39% Similarity=0.495 Sum_probs=31.4
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
.|++++|+|+|+.+.+++..++..|+ +|+.+.|+.+
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 221 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPE 221 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence 57899999999999999988888899 8999887643
No 305
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=86.50 E-value=0.62 Score=47.00 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=30.0
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
...++|||+|.++.+++..|++.|.+|+|+.+.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 57 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKR 57 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence 467999999999999999999999999999974
No 306
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=86.42 E-value=22 Score=33.37 Aligned_cols=144 Identities=13% Similarity=0.195 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCC----CCchHH-------HHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNF----QPGKDL-------EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLE 89 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~----~~~~~l-------~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (403)
+.+++++.+.+..+.|||+|.+-...-.+- +..+++ +.+++..+.|+-+- | .+-+
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSID--T------------~~~~ 101 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVD--T------------SKPE 101 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE--C------------CCHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEe--C------------CCHH
Confidence 468888888888899999999988765322 112233 33334446775433 2 1335
Q ss_pred HHHHHHHcCCcEE-EEeccccchHHHHHHhccCCCcEEEEeccCCCCCCC---------------HhHHHHHHHHHHHcC
Q 015614 90 ALHLAEDLGADYV-DFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPS---------------EEDLGYLVSRMQATG 153 (403)
Q Consensus 90 ll~~~~~~g~~yv-DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~---------------~~~l~~~~~~~~~~g 153 (403)
.++++++.|++.| |+-....++.++... +.+..+|+.+ . .++|. .+.+.+.++++.+.|
T Consensus 102 va~aAl~aGa~iINdvsg~~d~~~~~~~a---~~~~~vVlmh-~-~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~G 176 (282)
T 1aj0_A 102 VIRESAKVGAHIINDIRSLSEPGALEAAA---ETGLPVCLMH-M-QGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAG 176 (282)
T ss_dssp HHHHHHHTTCCEEEETTTTCSTTHHHHHH---HHTCCEEEEC-C-SSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECCCCCCHHHHHHHH---HhCCeEEEEc-c-CCCCccccccCccchHHHHHHHHHHHHHHHHHHcC
Confidence 7788999998887 555433444443222 2466777774 3 45554 456788888899888
Q ss_pred CCEEEEEe-----ecCCHhHHHHHHHHhccC---CCCE
Q 015614 154 ADIIKLVF-----SVNDITEIARIFQLLSHC---QVPI 183 (403)
Q Consensus 154 adivKia~-----~~~~~~D~~~ll~~~~~~---~~p~ 183 (403)
.+-=+|.. +..+.++++.+++-+... +.|+
T Consensus 177 i~~~~IilDPg~gf~k~~~~n~~ll~~l~~~~~~g~P~ 214 (282)
T 1aj0_A 177 IAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPL 214 (282)
T ss_dssp CCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCB
T ss_pred CChhhEEEeCCCCcccCHHHHHHHHHHHHHHhcCCCCE
Confidence 53113443 356788898888876543 5564
No 307
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=86.34 E-value=0.45 Score=49.26 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=30.4
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+.++|+|+|.+|.++++.|++.|.+|.|+.|..
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 679999999999999999999999999998763
No 308
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=86.32 E-value=0.35 Score=46.75 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=31.6
Q ss_pred CCCeEEEE-cchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLA-GAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lil-GaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.+++++|. |+||.+.+++..++..|++|+++.|+.+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 203 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTG 203 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 57899999 5799999999999999999999888753
No 309
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=86.30 E-value=0.63 Score=43.23 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=32.4
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.++++++|+|+|..|--++..|.++|.+|+|+.|..
T Consensus 150 ~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 150 FRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred cCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 357899999999999999999999999999998754
No 310
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=86.29 E-value=0.7 Score=45.97 Aligned_cols=63 Identities=17% Similarity=0.134 Sum_probs=45.7
Q ss_pred EEEEeccHHHHHHHHHHHH---HhcCcCCCCCcCCCCCCCCeEEEEcc-hhHHHHHHHHHHH-CCCeEEEEecCCC
Q 015614 332 LIGYNTDCEASITAIEDAI---KERGYKNGTASFGSPLAGRMFVLAGA-GGAGRALAFGAKS-RGARVVIFDIDFG 402 (403)
Q Consensus 332 l~G~NTD~~G~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~lilGa-GGaarai~~al~~-~g~~i~v~nR~~~ 402 (403)
++..|+--.|-.+..++.. +..++ ....+|.+||.|+ +|.++|++.+|++ .|++|.+++|+.+
T Consensus 16 ~~~~~~hp~gc~~~v~~qi~~~~~~~~--------~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~ 83 (405)
T 3zu3_A 16 FICVTAHPTGCEANVKKQIDYVTTEGP--------IANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERP 83 (405)
T ss_dssp TEECCCCHHHHHHHHHHHHHHHHHHCC--------CTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCC
T ss_pred eeecCCCCHHHHHHHHHHHHHHHhcCC--------cCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCch
Confidence 5666777788777665432 21121 2234789999985 7999999999999 9999998888643
No 311
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=86.24 E-value=1 Score=44.83 Aligned_cols=39 Identities=28% Similarity=0.368 Sum_probs=35.6
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+.||++.|+|-|-.|++++..|..+|++|+.++|+.+
T Consensus 141 ~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~ 179 (404)
T 1sc6_A 141 FEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENK 179 (404)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCch
Confidence 457899999999999999999999999999999999754
No 312
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=86.19 E-value=0.56 Score=50.69 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=31.5
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
++.+|+|+|+||.|..++..|+..|+ +|+|++.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCC
Confidence 46799999999999999999999999 99999875
No 313
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=86.14 E-value=0.44 Score=47.02 Aligned_cols=37 Identities=27% Similarity=0.275 Sum_probs=31.9
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
..|.+++|+|+|+.+.+++..++.+|+ +|+.+.++.+
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 249 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEV 249 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 357899999999999999998889999 8988877643
No 314
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=86.09 E-value=0.65 Score=42.66 Aligned_cols=36 Identities=28% Similarity=0.398 Sum_probs=28.8
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEE-ecC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIF-DID 400 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~-nR~ 400 (403)
.+.+|+++|.|+ ||.|++++..|.+.|++|++. .|+
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~ 60 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRD 60 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 466899999985 889999999999999987654 454
No 315
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=86.06 E-value=0.37 Score=47.09 Aligned_cols=35 Identities=26% Similarity=0.417 Sum_probs=31.7
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..++.|||+|..|.+++..|++.|.+|++++|+++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35799999999999999999999999999999753
No 316
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=86.05 E-value=1 Score=42.71 Aligned_cols=86 Identities=15% Similarity=0.186 Sum_probs=61.7
Q ss_pred EEEecccCCHHHHHHHHHHHHhcCCC---EEEEEecC--CCC---C--CC---chHHHHHHhcCCCcEEEEeecCCCCCC
Q 015614 13 ICAPLMAQSVEQVLSNMYQAKAEGAD---VVEIRLDC--INN---F--QP---GKDLEIILTKKPLPVLIVYRPKWAGGL 79 (403)
Q Consensus 13 icv~l~~~~~~e~~~~~~~~~~~~~D---~vElRlD~--l~~---~--~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~ 79 (403)
+.+.|.+.+.+++..-++.+.+.|+| +||+-+-+ .+. . ++ .+.++.+++..++|+++-++..
T Consensus 96 ~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~----- 170 (314)
T 2e6f_A 96 LFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY----- 170 (314)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC-----
T ss_pred EEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC-----
Confidence 56888899999998888888778899 99996631 100 0 11 1345556666689999888743
Q ss_pred CCCCHHHHHHHHHHHHHcC-CcEEEEe
Q 015614 80 YEGDEHKRLEALHLAEDLG-ADYVDFE 105 (403)
Q Consensus 80 ~~~~~~~~~~ll~~~~~~g-~~yvDiE 105 (403)
.+.++..++.+.+.+.| +++|++-
T Consensus 171 --~~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 171 --FDIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp --CCHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred --CCHHHHHHHHHHHHhcCCceEEEEe
Confidence 25667777788889999 9999864
No 317
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=86.04 E-value=5.2 Score=37.90 Aligned_cols=130 Identities=15% Similarity=0.120 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHH-hcCCCcEEEEeecCCC-CCCCCCCHHHHHHHHHHHHHcCC
Q 015614 22 VEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL-TKKPLPVLIVYRPKWA-GGLYEGDEHKRLEALHLAEDLGA 99 (403)
Q Consensus 22 ~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~-~~~~~PiI~T~R~~~e-GG~~~~~~~~~~~ll~~~~~~g~ 99 (403)
++++...+... ..|+|+|=+-. . .+.... ...+.|+|+.+-.... ... ..++.-.--.+.+++.|+
T Consensus 72 l~~~~~~i~~l-~~g~dav~~~~--------G-~~~~~~~~~~~~~lil~l~~~t~~~~~--~~~~~l~~~ve~Av~~GA 139 (295)
T 3glc_A 72 LERIDINIAPL-FEHADVLMCTR--------G-ILRSVVPPATNRPVVLRASGANSILAE--LSNEAVALSMDDAVRLNS 139 (295)
T ss_dssp CTTHHHHTGGG-GGGCSEEEECH--------H-HHHHHSCGGGCCCEEEECEECCCTTSC--TTCCEECSCHHHHHHTTC
T ss_pred hhhhHHHHHHh-hcCCCEEEECH--------h-HHhhhccccCCccEEEEEcCCCcCCCC--CccchhHHHHHHHHHCCC
Confidence 44444444333 34688887621 1 222222 2247899987763321 111 111111112567889999
Q ss_pred cEEEEeccccc----hHHH---HHH-hccCCCcEEEEeccCCCCCCCHhH-HHHHHHHHHHcCCCEEEEEeec
Q 015614 100 DYVDFELKVAS----NILG---KQY-SSHQSGTRFIVSCNLDCETPSEED-LGYLVSRMQATGADIIKLVFSV 163 (403)
Q Consensus 100 ~yvDiEl~~~~----~~~~---~l~-~~~~~~~kiI~S~H~f~~tp~~~~-l~~~~~~~~~~gadivKia~~~ 163 (403)
+.|++-+...+ +.++ ++. ..++.+.++|+-++.-......++ +....+.+.++|||+||.-.+.
T Consensus 140 daV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t~ 212 (295)
T 3glc_A 140 CAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVE 212 (295)
T ss_dssp SEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred CEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCCH
Confidence 99999877543 1222 333 344567888886543111112234 4556677889999999998653
No 318
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=86.01 E-value=0.65 Score=43.39 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=32.0
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+|+++|+|+|-.|--.+..|.++|.+|+|+.|..
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 347899999999999999999999999999998753
No 319
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=85.98 E-value=5 Score=39.10 Aligned_cols=120 Identities=20% Similarity=0.223 Sum_probs=69.1
Q ss_pred CCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCch---HHHHHHhcCCCcEEEEeecCCCCCCCCCCHH
Q 015614 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGK---DLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85 (403)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~---~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~ 85 (403)
+-|.+..|...-+..++...+. ..-|..++. ...++.+ .+..+++...+|+.+.+-.. +
T Consensus 45 ~~Pii~apM~~vt~~~lA~avA--~~GGlgii~------~~~s~e~~~~~I~~vk~~~~~pvga~ig~~------~---- 106 (361)
T 3khj_A 45 KIPLISSAMDTVTEHLMAVGMA--RLGGIGIIH------KNMDMESQVNEVLKVKNSGGLRVGAAIGVN------E---- 106 (361)
T ss_dssp SSSEEECSSTTTCSHHHHHHHH--HTTCEEEEC------SSSCHHHHHHHHHHHHHTTCCCCEEEECTT------C----
T ss_pred CCCEEeecCCCCCcHHHHHHHH--HcCCCeEEe------cCCCHHHHHHHHHHHHhccCceEEEEeCCC------H----
Confidence 3477777776655555554332 345666665 1223322 34444455678888776431 1
Q ss_pred HHHHHHHHHHHcCCcEEEEeccccc--h---HHHHHHhccCCCcEEEE-eccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 86 KRLEALHLAEDLGADYVDFELKVAS--N---ILGKQYSSHQSGTRFIV-SCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 86 ~~~~ll~~~~~~g~~yvDiEl~~~~--~---~~~~l~~~~~~~~kiI~-S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
.+.++.+++.|+++|.|+..... . .++.++.. -+..+|+ ..+ | .+ ..+++.+.|+|.+|+
T Consensus 107 --~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~--~~~~Vivg~v~----t--~e----~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 107 --IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK--MNIDVIVGNVV----T--EE----ATKELIENGADGIKV 172 (361)
T ss_dssp --HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH--CCCEEEEEEEC----S--HH----HHHHHHHTTCSEEEE
T ss_pred --HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh--cCCcEEEccCC----C--HH----HHHHHHHcCcCEEEE
Confidence 44566778889999988765532 2 22333322 2678886 432 2 22 345666789999998
Q ss_pred E
Q 015614 160 V 160 (403)
Q Consensus 160 a 160 (403)
-
T Consensus 173 G 173 (361)
T 3khj_A 173 G 173 (361)
T ss_dssp C
T ss_pred e
Confidence 4
No 320
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=85.93 E-value=11 Score=35.60 Aligned_cols=142 Identities=18% Similarity=0.246 Sum_probs=83.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCC----CCCchHHHH-------HHhcCCCcEEEEeecCCCCCCCCCCHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINN----FQPGKDLEI-------ILTKKPLPVLIVYRPKWAGGLYEGDEHKRLE 89 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~----~~~~~~l~~-------l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (403)
+.+++++..++..+.|||+|.+-...-.+ .+..+++.+ +++. +.|+-+ -| .+-+
T Consensus 50 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~-~vpiSI--DT------------~~~~ 114 (294)
T 2dqw_A 50 DPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL-GVPVSV--DT------------RKPE 114 (294)
T ss_dssp ---CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT-CSCEEE--EC------------SCHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC-CCeEEE--EC------------CCHH
Confidence 34556777777788999999998865432 222233333 3322 666543 22 2346
Q ss_pred HHHHHHHcCCcEE-EEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCH---------------hHHHHHHHHHHHcC
Q 015614 90 ALHLAEDLGADYV-DFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSE---------------EDLGYLVSRMQATG 153 (403)
Q Consensus 90 ll~~~~~~g~~yv-DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~---------------~~l~~~~~~~~~~g 153 (403)
.++++++.|++.| ||-....++.++ +.. +.+..+|+.+. .+++|.. +.+.+.++++.+.|
T Consensus 115 Va~aAl~aGa~iINdVsg~~d~~m~~-v~a--~~~~~vVlmh~-~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~G 190 (294)
T 2dqw_A 115 VAEEALKLGAHLLNDVTGLRDERMVA-LAA--RHGVAAVVMHM-PVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAG 190 (294)
T ss_dssp HHHHHHHHTCSEEECSSCSCCHHHHH-HHH--HHTCEEEEECC-SSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCEEEECCCCCChHHHH-HHH--HhCCCEEEEcC-CCCCCccccccCccccHHHHHHHHHHHHHHHHHHCC
Confidence 7888999999887 554443333333 322 34677888743 2156642 34677788899999
Q ss_pred CCEEEEEeec-----CCHhHHHHHHHHhcc---CCCCE
Q 015614 154 ADIIKLVFSV-----NDITEIARIFQLLSH---CQVPI 183 (403)
Q Consensus 154 adivKia~~~-----~~~~D~~~ll~~~~~---~~~p~ 183 (403)
.+ +|..=| .+.++++.+++-+.. .+.|+
T Consensus 191 i~--~IilDPG~Gf~kt~~~n~~ll~~l~~~~~~g~Pv 226 (294)
T 2dqw_A 191 VP--QVVLDPGFGFGKLLEHNLALLRRLDEIVALGHPV 226 (294)
T ss_dssp CS--CEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCB
T ss_pred CC--cEEEcCCCCcccCHHHHHHHHHHHHHHhcCCCCE
Confidence 77 887654 567888888776543 45664
No 321
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=85.93 E-value=1.9 Score=42.94 Aligned_cols=53 Identities=19% Similarity=0.167 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHH-CCCeEE-EEecC
Q 015614 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARVV-IFDID 400 (403)
Q Consensus 339 ~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~-~g~~i~-v~nR~ 400 (403)
+.|.+.++++.+.+.+ .++++++++|.|.|.+|+.++.-|.+ +|++|. |.+++
T Consensus 189 g~Gv~~~~~~~~~~~g---------~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~ 243 (415)
T 2tmg_A 189 GRGVKVCAGLAMDVLG---------IDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSR 243 (415)
T ss_dssp HHHHHHHHHHHHHHTT---------CCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHcC---------CCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4688888888776433 46789999999999999999999998 999654 77653
No 322
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=85.93 E-value=0.33 Score=47.11 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=31.1
Q ss_pred CCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.|++++|.| +||.+.+++..++..|++|+++.|+.
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 198 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD 198 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH
Confidence 578999999 69999999999999999998888864
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=85.92 E-value=0.37 Score=46.44 Aligned_cols=36 Identities=25% Similarity=0.305 Sum_probs=31.5
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
.|++++|+|+|+.+.+++..++..|+ +|+++.++.+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~ 202 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKH 202 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHH
Confidence 47899999999999999998888999 8999887643
No 324
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=85.91 E-value=0.65 Score=47.89 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=31.0
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
++.+|+|+|+||.|-.++..|+..|+ +|+|++.+
T Consensus 31 ~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D 65 (531)
T 1tt5_A 31 ESAHVCLINATATGTEILKNLVLPGIGSFTIIDGN 65 (531)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCC
T ss_pred hcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35789999999999999999999999 99999864
No 325
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=85.88 E-value=0.61 Score=42.98 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=29.3
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEE-ecC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIF-DID 400 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~~i~v~-nR~ 400 (403)
.++|.++|.|+ ||.|++++..|.+.|++|.+. .|+
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~ 60 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAAN 60 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 35788999985 889999999999999988776 554
No 326
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=85.78 E-value=0.96 Score=44.62 Aligned_cols=37 Identities=24% Similarity=0.367 Sum_probs=34.1
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
..+.|+++.|+|.|..|++++..|...|++|.+++|+
T Consensus 115 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~ 151 (381)
T 3oet_A 115 FSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPP 151 (381)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHH
T ss_pred CccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578999999999999999999999999999999874
No 327
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=85.73 E-value=19 Score=32.19 Aligned_cols=76 Identities=21% Similarity=0.149 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCC----CCCCchHHHHHHhcCCCcEE-EEeecCCCCCCCC-CCH---HHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCIN----NFQPGKDLEIILTKKPLPVL-IVYRPKWAGGLYE-GDE---HKRLEAL 91 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~----~~~~~~~l~~l~~~~~~PiI-~T~R~~~eGG~~~-~~~---~~~~~ll 91 (403)
+.++.++.+ .+.|.|.||++.+... .....+++..+.+..++.+. ++.-.. +. .++ +.-.+.+
T Consensus 20 ~~~~~l~~~---~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~-----~~~~~~~~~~~~~~~i 91 (272)
T 2q02_A 20 SIEAFFRLV---KRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYP-----FNQLTEEVVKKTEGLL 91 (272)
T ss_dssp CHHHHHHHH---HHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETT-----TTSCCHHHHHHHHHHH
T ss_pred CHHHHHHHH---HHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhc-----cCCcHHHHHHHHHHHH
Confidence 566666544 4679999999987542 11223456666666777763 332111 11 122 2334556
Q ss_pred HHHHHcCCcEEEE
Q 015614 92 HLAEDLGADYVDF 104 (403)
Q Consensus 92 ~~~~~~g~~yvDi 104 (403)
+.|.++|+.+|=+
T Consensus 92 ~~a~~lG~~~v~~ 104 (272)
T 2q02_A 92 RDAQGVGARALVL 104 (272)
T ss_dssp HHHHHHTCSEEEE
T ss_pred HHHHHhCCCEEEE
Confidence 6777888888766
No 328
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=85.72 E-value=12 Score=35.65 Aligned_cols=151 Identities=13% Similarity=0.090 Sum_probs=87.6
Q ss_pred CCeeEEEecccCCHHHHHHHHHHHHhcCC-CEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHH
Q 015614 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGA-DVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87 (403)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~~-D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 87 (403)
..|.|+.|..+-+-.++...+.+ .|+ ++++.+. +......+.+..+++.++.|+.+.+-.. +. .+
T Consensus 12 ~~Pii~apM~g~s~~~la~av~~---aG~lG~i~~~~--~~~~~~~~~i~~i~~~~~~p~gvnl~~~------~~---~~ 77 (332)
T 2z6i_A 12 DYPIFQGGMAWVADGDLAGAVSK---AGGLGIIGGGN--APKEVVKANIDKIKSLTDKPFGVNIMLL------SP---FV 77 (332)
T ss_dssp SSSEEECCCTTTCCHHHHHHHHH---HTSBEEEECTT--CCHHHHHHHHHHHHHHCCSCEEEEECTT------ST---TH
T ss_pred CCCEEeCCCCCCCcHHHHHHHHh---CCCcEEeCCCC--CCHHHHHHHHHHHHHhcCCCEEEEecCC------CC---CH
Confidence 34777778776665666554443 354 7887541 1110012344556665677887765431 11 13
Q ss_pred HHHHHHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeec----
Q 015614 88 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSV---- 163 (403)
Q Consensus 88 ~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~---- 163 (403)
-+.++.+.+.|++.|.+-...+.+..+.++. .+.+++.+.+. .+ ...++.+.|+|.+.+-...
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~---~g~~v~~~v~~------~~----~a~~~~~~GaD~i~v~g~~~GG~ 144 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAGNPSKYMERFHE---AGIIVIPVVPS------VA----LAKRMEKIGADAVIAEGMEAGGH 144 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSSCGGGTHHHHHH---TTCEEEEEESS------HH----HHHHHHHTTCSCEEEECTTSSEE
T ss_pred HHHHHHHHHCCCCEEEECCCChHHHHHHHHH---cCCeEEEEeCC------HH----HHHHHHHcCCCEEEEECCCCCCC
Confidence 4566778889999999887777777666653 46788877632 22 2455667899999985321
Q ss_pred -CCHhHHHHHHHHhccCCCCEEEE
Q 015614 164 -NDITEIARIFQLLSHCQVPIIAY 186 (403)
Q Consensus 164 -~~~~D~~~ll~~~~~~~~p~i~~ 186 (403)
....+...+-++....++|+|+-
T Consensus 145 ~g~~~~~~ll~~i~~~~~iPViaa 168 (332)
T 2z6i_A 145 IGKLTTMTLVRQVATAISIPVIAA 168 (332)
T ss_dssp CCSSCHHHHHHHHHHHCSSCEEEE
T ss_pred CCCccHHHHHHHHHHhcCCCEEEE
Confidence 11223322223333457898764
No 329
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=85.70 E-value=0.74 Score=46.37 Aligned_cols=33 Identities=27% Similarity=0.237 Sum_probs=30.4
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
...++|||+|-++.+++..|++.|.+|.|+.+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 357999999999999999999999999999884
No 330
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=85.66 E-value=0.9 Score=45.44 Aligned_cols=54 Identities=17% Similarity=0.256 Sum_probs=43.4
Q ss_pred cHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEE-EEecC
Q 015614 338 DCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDID 400 (403)
Q Consensus 338 D~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~-v~nR~ 400 (403)
-+.|....++..+.+.+ .++++++++|.|.|.+|+.++.-|.++|++|. |.+++
T Consensus 191 Tg~Gv~~~~~~~~~~~g---------~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~ 245 (421)
T 2yfq_A 191 TGFGVAVVVRESAKRFG---------IKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWD 245 (421)
T ss_dssp HHHHHHHHHHHHHHHTT---------CCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCC
T ss_pred hHHHHHHHHHHHHHhcC---------CCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecC
Confidence 35688888888776433 45789999999999999999999999999654 76665
No 331
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=85.58 E-value=0.96 Score=46.05 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=31.6
Q ss_pred CCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 368 GRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
++++||.|| |..|++++..|.+.|.+|+++.|+.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~ 182 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP 182 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 679999995 88899999999999999999999864
No 332
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=85.52 E-value=0.41 Score=46.46 Aligned_cols=36 Identities=33% Similarity=0.402 Sum_probs=31.0
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
.+++++|+|+|+.+.+++..++.+|+ +|+.+.++.+
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~ 226 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVES 226 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHH
Confidence 57899999999999999988888999 7888887643
No 333
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=85.49 E-value=5.4 Score=38.47 Aligned_cols=87 Identities=20% Similarity=0.301 Sum_probs=55.4
Q ss_pred ecccCCHHHHHHH----HHHHHhcCCCEEEEEecC-------CCC---C-CC-------------chHHHHHHhcCCCcE
Q 015614 16 PLMAQSVEQVLSN----MYQAKAEGADVVEIRLDC-------INN---F-QP-------------GKDLEIILTKKPLPV 67 (403)
Q Consensus 16 ~l~~~~~~e~~~~----~~~~~~~~~D~vElRlD~-------l~~---~-~~-------------~~~l~~l~~~~~~Pi 67 (403)
.++..++++++.+ ++.+.+.|.|.|||-.-+ |.+ . .+ .+.++.+|+..+.|+
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv 212 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPL 212 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCce
Confidence 3455555554444 444567899999998763 111 1 11 134556666678888
Q ss_pred EEEeecC--CCCCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015614 68 LIVYRPK--WAGGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (403)
Q Consensus 68 I~T~R~~--~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiE 105 (403)
.+-++.. .+||. +.++..++.+.+.+.|++||++-
T Consensus 213 ~vRls~~~~~~~g~---~~~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 213 FVRISASDYHPDGL---TAKDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp EEEEESCCCSTTSC---CGGGHHHHHHHHHHTTCCEEEEE
T ss_pred EEEeccccccCCCC---CHHHHHHHHHHHHHcCCCEEEEe
Confidence 7766653 22342 34677888899999999999985
No 334
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=85.46 E-value=0.59 Score=44.33 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=28.5
Q ss_pred CeEEEEcchhHHHHHHHHHHH--CCCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKS--RGARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~--~g~~i~v~nR~~ 401 (403)
..|+|||+|.++.++++.|++ .|.+|+|+.|..
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~ 100 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 469999999999999999974 588999998753
No 335
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=85.45 E-value=0.77 Score=45.88 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=31.0
Q ss_pred CCCCeEEEEcc-hhHHHH--HHHHHHHCCCeEEEEecCCC
Q 015614 366 LAGRMFVLAGA-GGAGRA--LAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGa-GGaara--i~~al~~~g~~i~v~nR~~~ 402 (403)
..+|.++|.|+ +|.|+| ++.++.+.|++|+++.|+.+
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~ 97 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETG 97 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcc
Confidence 56899999995 788999 88888888999999998643
No 336
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=85.30 E-value=16 Score=32.98 Aligned_cols=120 Identities=14% Similarity=0.187 Sum_probs=72.5
Q ss_pred eeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHH
Q 015614 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEA 90 (403)
Q Consensus 11 ~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~l 90 (403)
..+...|...+.+++..-.+...+.|++++|+-+.- .+..+.++.+++..+-++|=- |... +.+ -
T Consensus 13 ~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t---~~a~~~I~~l~~~~p~~~IGA------GTVl--t~~----~ 77 (217)
T 3lab_A 13 KPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRT---EAGLAAISAIKKAVPEAIVGA------GTVC--TAD----D 77 (217)
T ss_dssp CSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHHHHHCTTSEEEE------ECCC--SHH----H
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCC---ccHHHHHHHHHHHCCCCeEee------cccc--CHH----H
Confidence 345566888999999988888888999999995542 122356677777665566522 2222 222 3
Q ss_pred HHHHHHcCCcEEEEeccccchHHHHHHhccCCCc------EEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 91 LHLAEDLGADYVDFELKVASNILGKQYSSHQSGT------RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 91 l~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~------kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
.+.+++.|+++|=-- .+.++..+... +.+. .+|--. .|| +|+ .++.++|+|++|+
T Consensus 78 a~~ai~AGA~fivsP-~~~~evi~~~~---~~~v~~~~~~~~~PG~----~Tp--tE~----~~A~~~Gad~vK~ 138 (217)
T 3lab_A 78 FQKAIDAGAQFIVSP-GLTPELIEKAK---QVKLDGQWQGVFLPGV----ATA--SEV----MIAAQAGITQLKC 138 (217)
T ss_dssp HHHHHHHTCSEEEES-SCCHHHHHHHH---HHHHHCSCCCEEEEEE----CSH--HHH----HHHHHTTCCEEEE
T ss_pred HHHHHHcCCCEEEeC-CCcHHHHHHHH---HcCCCccCCCeEeCCC----CCH--HHH----HHHHHcCCCEEEE
Confidence 456788999998432 23333333222 2233 454433 244 233 3456789999997
No 337
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.27 E-value=1.2 Score=44.48 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=35.0
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.||++.|+|-|-.|++++..|..+|++|+.++|+.
T Consensus 152 ~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~ 189 (416)
T 3k5p_A 152 REVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSD 189 (416)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred ccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcc
Confidence 45789999999999999999999999999999999874
No 338
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=85.19 E-value=0.59 Score=44.45 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=29.9
Q ss_pred eEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCCC
Q 015614 370 MFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFGT 403 (403)
Q Consensus 370 ~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~k 403 (403)
+++|.|+ ||.+.+++..++..|++|+++.|+.+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~ 187 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA 187 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 7999997 999999999888899998888887654
No 339
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=85.11 E-value=0.51 Score=46.12 Aligned_cols=36 Identities=33% Similarity=0.378 Sum_probs=31.5
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~~ 402 (403)
.|++++|+|+||.+.+++..++.+|+ +|+++.|+.+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 231 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPN 231 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHH
Confidence 47899999999999999998889995 9999887643
No 340
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=85.03 E-value=3.8 Score=37.53 Aligned_cols=105 Identities=10% Similarity=0.061 Sum_probs=67.4
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEe-cC--CCCCCC-chHHHHHHhcC--CCcEEEEeecCCCCCCCCCCHH
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DC--INNFQP-GKDLEIILTKK--PLPVLIVYRPKWAGGLYEGDEH 85 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRl-D~--l~~~~~-~~~l~~l~~~~--~~PiI~T~R~~~eGG~~~~~~~ 85 (403)
+|+-+|..-|...+..+++.+.+.|+|.+++++ |- .+.++. ...++.+|+.+ +.++++. +.+
T Consensus 15 ~i~psila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~~~~DvhLMv~------------~p~ 82 (237)
T 3cu2_A 15 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCFKDVHLMVR------------NQL 82 (237)
T ss_dssp CEEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTTSEEEEEEECS------------CHH
T ss_pred eEEEeeeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhhCCCCeEEEEE------------CHH
Confidence 489999999988888888888888999999987 42 122221 14566666544 2233211 223
Q ss_pred HHHHHHHHHHHcCCcEEEEeccccchHHHHHHhccCC---------CcEEEEecc
Q 015614 86 KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS---------GTRFIVSCN 131 (403)
Q Consensus 86 ~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~---------~~kiI~S~H 131 (403)
.+++.+++.|+++|-+=....+...+.+...+.. +.++.++..
T Consensus 83 ---~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~ 134 (237)
T 3cu2_A 83 ---EVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLC 134 (237)
T ss_dssp ---HHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEEC
T ss_pred ---HHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEe
Confidence 3566778899999777665554433333344455 678888873
No 341
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=84.86 E-value=0.58 Score=44.75 Aligned_cols=36 Identities=36% Similarity=0.405 Sum_probs=29.4
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCC-CeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g-~~i~v~nR~~~ 402 (403)
.|++++|+|+||.+-.++..++.+| ++|+.+.++.+
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~ 199 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQD 199 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHH
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHH
Confidence 4789999999999888877777775 59998887654
No 342
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=84.79 E-value=0.62 Score=44.25 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=30.0
Q ss_pred eEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCCC
Q 015614 370 MFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFGT 403 (403)
Q Consensus 370 ~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~k 403 (403)
+++|+|+ ||.+.+++..++..|++|+++.++.+|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~ 186 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE 186 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 7999997 999999999889999998888887654
No 343
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=84.77 E-value=0.43 Score=47.68 Aligned_cols=36 Identities=25% Similarity=0.236 Sum_probs=30.9
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..|++++|.|+ ||.+.+++..++..|++++++.++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~ 255 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA 255 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 35899999998 9999999999999999877777764
No 344
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=84.76 E-value=25 Score=32.60 Aligned_cols=143 Identities=13% Similarity=0.057 Sum_probs=86.5
Q ss_pred cCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015614 19 AQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG 98 (403)
Q Consensus 19 ~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g 98 (403)
..+.+++.+..+++.+.+++.|=+.--+. .......+.+++++- |+=.=+.|.. +.+.+..=.+.|++.|
T Consensus 55 ~~t~~~I~~lc~eA~~~~~aaVCV~p~~V------~~a~~~L~gs~v~v~-tVigFP~G~~---~~~~Kv~Ea~~Ai~~G 124 (260)
T 3r12_A 55 FATPDDIKKLCLEARENRFHGVCVNPCYV------KLAREELEGTDVKVV-TVVGFPLGAN---ETRTKAHEAIFAVESG 124 (260)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEECGGGH------HHHHHHHTTSCCEEE-EEESTTTCCS---CHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEECHHHH------HHHHHHhcCCCCeEE-EEecCCCCCC---cHHHHHHHHHHHHHcC
Confidence 34567788878888888888776521111 122233333454444 4333233322 3355665667899999
Q ss_pred CcEEEEeccccc----------hHHHHHHhc-cCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEe----ec
Q 015614 99 ADYVDFELKVAS----------NILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF----SV 163 (403)
Q Consensus 99 ~~yvDiEl~~~~----------~~~~~l~~~-~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~----~~ 163 (403)
++-||+=++... +.+..+... +....|+|+--... +.+++....+-+.+.|||+||--+ ..
T Consensus 125 AdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L----t~eei~~A~~ia~eaGADfVKTSTGf~~~G 200 (260)
T 3r12_A 125 ADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYL----DTEEKIAACVISKLAGAHFVKTSTGFGTGG 200 (260)
T ss_dssp CSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC----CHHHHHHHHHHHHHTTCSEEECCCSSSSCC
T ss_pred CCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCC----CHHHHHHHHHHHHHhCcCEEEcCCCCCCCC
Confidence 999998665421 123334322 22357888765422 467788888888899999999774 23
Q ss_pred CCHhHHHHHHHH
Q 015614 164 NDITEIARIFQL 175 (403)
Q Consensus 164 ~~~~D~~~ll~~ 175 (403)
.+.+|+..+.+.
T Consensus 201 AT~edV~lm~~~ 212 (260)
T 3r12_A 201 ATAEDVHLMKWI 212 (260)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 467787666654
No 345
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=84.71 E-value=9.5 Score=34.91 Aligned_cols=80 Identities=14% Similarity=0.158 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC--chHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHH-------HHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQP--GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-------LEAL 91 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~--~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~-------~~ll 91 (403)
++++.+..+ .+.|.|.||++.+.+...+. .+.++.+.+..++.+....-..........+++.| .+.+
T Consensus 18 ~~~~~l~~~---~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i 94 (294)
T 3vni_A 18 DYKYYIEKV---AKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLL 94 (294)
T ss_dssp CHHHHHHHH---HHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHH---HHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHH
Confidence 466666554 45799999999876544332 23455555667887765221111111122233322 3345
Q ss_pred HHHHHcCCcEEE
Q 015614 92 HLAEDLGADYVD 103 (403)
Q Consensus 92 ~~~~~~g~~yvD 103 (403)
+.+.++|+.+|-
T Consensus 95 ~~a~~lG~~~v~ 106 (294)
T 3vni_A 95 KRLYKLDVHLIG 106 (294)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHhCCCeee
Confidence 566677777764
No 346
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=84.66 E-value=0.82 Score=45.85 Aligned_cols=32 Identities=13% Similarity=0.248 Sum_probs=29.7
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
.+++|||+|-++.++++.|.+.|.+|+|+.++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCC
Confidence 58999999999999999999999999998765
No 347
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=84.61 E-value=0.82 Score=48.31 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=30.2
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
...|+|+|+|.+|.++|.+|++.|++|.|+.++
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~ 60 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHN 60 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeec
Confidence 357999999999999999999999999999875
No 348
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=84.51 E-value=26 Score=32.71 Aligned_cols=156 Identities=16% Similarity=0.203 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCC----CCCchHHH-------HHHhcCCCcEEEEeecCCCCCCCCCCHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINN----FQPGKDLE-------IILTKKPLPVLIVYRPKWAGGLYEGDEHKRLE 89 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~----~~~~~~l~-------~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (403)
+.+++++.+.+..+.|||+|.+-...-.+ .+..+++. .+++. +.|+-+- | .+-+
T Consensus 27 ~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~piSID--T------------~~~~ 91 (280)
T 1eye_A 27 DLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSID--T------------MRAD 91 (280)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TCCEEEE--C------------SCHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCEEEEe--C------------CCHH
Confidence 57888888888899999999998755322 11122333 23332 6665432 2 2346
Q ss_pred HHHHHHHcCCcEE-EEeccc-cchHHHHHHhccCCCcEEEEeccCCCCCCC----------------HhHHHHHHHHHHH
Q 015614 90 ALHLAEDLGADYV-DFELKV-ASNILGKQYSSHQSGTRFIVSCNLDCETPS----------------EEDLGYLVSRMQA 151 (403)
Q Consensus 90 ll~~~~~~g~~yv-DiEl~~-~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~----------------~~~l~~~~~~~~~ 151 (403)
.++++++.|++.| ||--.. .++.++... +.+..+|+.+- .++|. .+.+.+.++++.+
T Consensus 92 va~aAl~aGa~iINdvsg~~~d~~m~~~~a---~~~~~vVlmh~--~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~ 166 (280)
T 1eye_A 92 VARAALQNGAQMVNDVSGGRADPAMGPLLA---EADVPWVLMHW--RAVSADTPHVPVRYGNVVAEVRADLLASVADAVA 166 (280)
T ss_dssp HHHHHHHTTCCEEEETTTTSSCTTHHHHHH---HHTCCEEEECC--CCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCCCCCHHHHHHHH---HhCCeEEEEcC--CCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHH
Confidence 7889999998887 554332 334443222 24666777743 33432 3456778888888
Q ss_pred cCCCEEEEEe-----ecCCHhHHHHHHHHhcc---CCCCEEEEEcCccchhhhh
Q 015614 152 TGADIIKLVF-----SVNDITEIARIFQLLSH---CQVPIIAYSVGERGLVSQL 197 (403)
Q Consensus 152 ~gadivKia~-----~~~~~~D~~~ll~~~~~---~~~p~i~~~MG~~G~~SRi 197 (403)
.|.+-=+|.. ...+.++++.+++-+.. .+.|+. ++.+....+..+
T Consensus 167 ~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~~~~~~g~Pvl-~G~Srksfi~~~ 219 (280)
T 1eye_A 167 AGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVL-VGASRKRFLGAL 219 (280)
T ss_dssp TTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBE-ECCTTCHHHHHH
T ss_pred cCCChhhEEEECCCCcccCHHHHHHHHHHHHHhhcCCCCEE-EEecchHHHHhh
Confidence 8853113444 44678888888776543 466653 244333333333
No 349
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=84.50 E-value=0.59 Score=44.91 Aligned_cols=36 Identities=31% Similarity=0.437 Sum_probs=31.3
Q ss_pred CCCeEEEE-cchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 367 AGRMFVLA-GAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lil-GaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
.|++++|. |+|+.+.+++..++..|++|+++.++.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~ 186 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNE 186 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 47899999 6899999999999999999998888643
No 350
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=84.49 E-value=0.61 Score=47.53 Aligned_cols=33 Identities=12% Similarity=0.116 Sum_probs=29.8
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
.++++|||+|-+|-+++..|.+.+++|+|++++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCC
Confidence 468999999999999999998888999999986
No 351
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=84.44 E-value=8 Score=34.83 Aligned_cols=92 Identities=12% Similarity=0.114 Sum_probs=61.6
Q ss_pred CCCCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcC-CCcEEEEeecCCCCCCCCCCH
Q 015614 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDE 84 (403)
Q Consensus 6 ~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~ 84 (403)
|++.+|.+|+.+-.++.++.+..+++. ...++.+++=..++....+ +.+..|++.. +.++++=+... + . .
T Consensus 1 ~~~~~~~livAlD~~~~~~a~~~~~~~-~~~~~~ikvg~~lf~~~G~-~~v~~l~~~~p~~~iflDlKl~-D-----i-p 71 (221)
T 3exr_A 1 MTKQLPNLQVALDHSNLKGAITAAVSV-GNEVDVIEAGTVCLLQVGS-ELVEVLRSLFPDKIIVADTKCA-D-----A-G 71 (221)
T ss_dssp --CCCCEEEEEECCSSHHHHHHHHHHH-GGGCSEEEECHHHHHHHCT-HHHHHHHHHCTTSEEEEEEEEC-S-----C-H
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHhh-CCCceEEEECHHHHHhcCH-HHHHHHHHhCCCCcEEEEEEee-c-----c-H
Confidence 678889999999999999999888775 4458999997776643333 3567777654 56777766643 2 1 2
Q ss_pred HHHHHHHHHHHHcCCcEEEEecccc
Q 015614 85 HKRLEALHLAEDLGADYVDFELKVA 109 (403)
Q Consensus 85 ~~~~~ll~~~~~~g~~yvDiEl~~~ 109 (403)
+-.. +.+.++|++++-+-....
T Consensus 72 ~t~~---~~~~~~Gad~vtVH~~~g 93 (221)
T 3exr_A 72 GTVA---KNNAVRGADWMTCICSAT 93 (221)
T ss_dssp HHHH---HHHHTTTCSEEEEETTSC
T ss_pred HHHH---HHHHHcCCCEEEEeccCC
Confidence 2222 235778888877755443
No 352
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=84.43 E-value=1 Score=47.55 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=31.2
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
.+++++|+|+|-++.++++.|.+.|.+|+|+.+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~ 139 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR 139 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecC
Confidence 4689999999999999999999999999999875
No 353
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=84.43 E-value=1 Score=46.41 Aligned_cols=38 Identities=21% Similarity=0.303 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
...+|+++|||+|-+|--++.+|++.|.+|+++.|++.
T Consensus 175 ~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 175 SLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45689999999999999999999999989999999753
No 354
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=84.41 E-value=29 Score=33.03 Aligned_cols=159 Identities=13% Similarity=0.165 Sum_probs=97.1
Q ss_pred eeEEEecccC------------CHHHHHHHHHHHHhcCCCEEEEEecC-CCCC---CC---chHHHHHHhcCCCcEEEEe
Q 015614 11 TMICAPLMAQ------------SVEQVLSNMYQAKAEGADVVEIRLDC-INNF---QP---GKDLEIILTKKPLPVLIVY 71 (403)
Q Consensus 11 ~~icv~l~~~------------~~~e~~~~~~~~~~~~~D~vElRlD~-l~~~---~~---~~~l~~l~~~~~~PiI~T~ 71 (403)
..|++.+++. |.+|+..+..++.+.||-++=+.+-- -... ++ .+.+..+|+.++..|.+|
T Consensus 8 vIIt~A~tGa~~t~~~~P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~T- 86 (311)
T 3e49_A 8 VIITCAVTGAIHTPSMSPYLPVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTDAVINLT- 86 (311)
T ss_dssp BCEEEECSCSSSCGGGCTTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCCCEEEEC-
T ss_pred EEEEEcCCCCcCCcccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEEC-
Confidence 4567677752 45889999889999999999987764 2211 11 356677877665544344
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeccccch---------------HHHHHHhccCCCcEEEEeccCCCCC
Q 015614 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASN---------------ILGKQYSSHQSGTRFIVSCNLDCET 136 (403)
Q Consensus 72 R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiEl~~~~~---------------~~~~l~~~~~~~~kiI~S~H~f~~t 136 (403)
+ ||....+.++|++.+.. +.+|..-++.....- +-+..+.. ....+ |.+|
T Consensus 87 -T---gg~~~~~~eerla~~~~---~~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~--~~~~v------~~n~ 151 (311)
T 3e49_A 87 -T---GGSPHMTVEERLRPATH---YMPELASLNMGSMNFGLYPMLERFKEFAHGWEREHLER--SRDLV------FKNT 151 (311)
T ss_dssp -S---CSCTTSCHHHHHHHHHH---HCCSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHG--GGGCE------ECCC
T ss_pred -C---CCCCCCCHHHHHHHHHh---cCCCeeeecCCCcccccccchhhccccccccchhhccc--CCCce------ecCC
Confidence 3 44444678888776543 468998887554210 00011100 00111 2233
Q ss_pred CCHhHHHHHHHHHHHcCCCEEEEEeecCCHhHHHHHHHHhcc--C-CCCEEEEEcCc
Q 015614 137 PSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSH--C-QVPIIAYSVGE 190 (403)
Q Consensus 137 p~~~~l~~~~~~~~~~gadivKia~~~~~~~D~~~ll~~~~~--~-~~p~i~~~MG~ 190 (403)
.+.+.++++.|.+.| +|.=...-+..++..+.++..+ . ....+-+.||-
T Consensus 152 --~~~i~~~~~~~~e~G---i~pE~e~fd~g~l~~~~~l~~~Gl~~~p~~~~~vlGv 203 (311)
T 3e49_A 152 --FADIEFILKTCGGNG---TRFEFECYDTSHLYNLAHFVDRKLATPPFFVQTVFGL 203 (311)
T ss_dssp --HHHHHHHHHHHHTTT---CEEEEEECSHHHHHHHHHHHHTTCSCSSEEEEEEESC
T ss_pred --HHHHHHHHHHHHHcC---CeeEEEEECHHHHHHHHHHHHcCCCCCCeEEEEEecC
Confidence 467889999999988 4666666688888777777543 1 34466667763
No 355
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=84.37 E-value=7.6 Score=34.91 Aligned_cols=146 Identities=14% Similarity=0.140 Sum_probs=77.3
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEec-C-CCC-CCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHc
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLD-C-INN-FQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD-~-l~~-~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~ 97 (403)
+..+..+ .+.+.|+|.+.++.. . +.. ... +.++.+++..++|+++. ||.. +.+ + ++.+++.
T Consensus 32 d~~~~a~---~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~------ggi~--~~~-~---~~~~l~~ 95 (244)
T 2y88_A 32 SAVDAAL---GWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVELS------GGIR--DDE-S---LAAALAT 95 (244)
T ss_dssp EHHHHHH---HHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEEE------SSCC--SHH-H---HHHHHHT
T ss_pred CHHHHHH---HHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEEE------CCCC--CHH-H---HHHHHHc
Confidence 5555554 444569999999842 1 222 222 56778888889999984 4442 222 2 4566678
Q ss_pred CCcEEEEeccccc--hHHHHHHhccCCCcEEE--Eecc-----------CCCCCCCHhHHHHHHHHHHHcCCCEEEEEee
Q 015614 98 GADYVDFELKVAS--NILGKQYSSHQSGTRFI--VSCN-----------LDCETPSEEDLGYLVSRMQATGADIIKLVFS 162 (403)
Q Consensus 98 g~~yvDiEl~~~~--~~~~~l~~~~~~~~kiI--~S~H-----------~f~~tp~~~~l~~~~~~~~~~gadivKia~~ 162 (403)
|++.|-+-..... +.+.++..... .+++ ++.+ .+... .++..+..+++.+.|++.+=+-..
T Consensus 96 Gad~V~lg~~~l~~p~~~~~~~~~~g--~~~~~~ld~~~~~~~~~v~~~g~~~~--~~~~~e~~~~~~~~G~~~i~~~~~ 171 (244)
T 2y88_A 96 GCARVNVGTAALENPQWCARVIGEHG--DQVAVGLDVQIIDGEHRLRGRGWETD--GGDLWDVLERLDSEGCSRFVVTDI 171 (244)
T ss_dssp TCSEEEECHHHHHCHHHHHHHHHHHG--GGEEEEEEEEEETTEEEEEEGGGTEE--EEEHHHHHHHHHHTTCCCEEEEET
T ss_pred CCCEEEECchHhhChHHHHHHHHHcC--CCEEEEEeccccCCCCEEEECCccCC--CCCHHHHHHHHHhCCCCEEEEEec
Confidence 9999887554322 23334432211 2233 2322 11110 114566677778889886633221
Q ss_pred cC----CHhHHHHHHHHhccCCCCEEEE
Q 015614 163 VN----DITEIARIFQLLSHCQVPIIAY 186 (403)
Q Consensus 163 ~~----~~~D~~~ll~~~~~~~~p~i~~ 186 (403)
.. +.-|...+.++....+.|+|+.
T Consensus 172 ~~~~~~~g~~~~~~~~l~~~~~ipvia~ 199 (244)
T 2y88_A 172 TKDGTLGGPNLDLLAGVADRTDAPVIAS 199 (244)
T ss_dssp TTTTTTSCCCHHHHHHHHTTCSSCEEEE
T ss_pred CCccccCCCCHHHHHHHHHhCCCCEEEE
Confidence 11 1124344444444456777664
No 356
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=84.34 E-value=0.93 Score=44.90 Aligned_cols=33 Identities=42% Similarity=0.544 Sum_probs=30.1
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
...++|+|+|-+|.++++.|++.|.+|.|+.+.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~ 61 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRR 61 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEecc
Confidence 468999999999999999999999999999875
No 357
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=84.33 E-value=0.98 Score=47.62 Aligned_cols=34 Identities=38% Similarity=0.610 Sum_probs=31.2
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.++++|+|+|-+|.+++..|.+.|.+|+|+.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 406 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 406 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5789999999999999999999999999999853
No 358
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=84.25 E-value=0.69 Score=48.58 Aligned_cols=33 Identities=24% Similarity=0.269 Sum_probs=30.4
Q ss_pred CeEEEEcchhHHHHHHHHHHH-CCCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKS-RGARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~-~g~~i~v~nR~~ 401 (403)
..|+|+|+|.+|.+++..|++ .|++|.|+.|..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999 899999999864
No 359
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=84.22 E-value=0.68 Score=48.13 Aligned_cols=33 Identities=30% Similarity=0.311 Sum_probs=29.9
Q ss_pred CeEEEEcchhHHHHHHHHHHHC------CCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSR------GARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~------g~~i~v~nR~~ 401 (403)
..|+|+|+|.+|.++|..|++. |.+|.|+.|..
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~ 74 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 74 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCC
Confidence 4699999999999999999998 99999998863
No 360
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=84.03 E-value=2.3 Score=39.92 Aligned_cols=84 Identities=14% Similarity=0.214 Sum_probs=56.7
Q ss_pred eEEEecccCCHHHHHHHHHHHHh-cCCCEEEEEecCCCC--------CCC---chHHHHHHhcCCCcEEEEeecCCCCCC
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKA-EGADVVEIRLDCINN--------FQP---GKDLEIILTKKPLPVLIVYRPKWAGGL 79 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~-~~~D~vElRlD~l~~--------~~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~ 79 (403)
.+.+.|.+.+.+++..-++.+.+ .|+|.||+-+.+-.. .++ .+.++.+++..+.|+++-++...
T Consensus 100 p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~---- 175 (311)
T 1ep3_A 100 PIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNV---- 175 (311)
T ss_dssp CEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCS----
T ss_pred cEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCh----
Confidence 35788888899888877776654 799999996532110 011 24455666666899998887421
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEEE
Q 015614 80 YEGDEHKRLEALHLAEDLGADYVDF 104 (403)
Q Consensus 80 ~~~~~~~~~~ll~~~~~~g~~yvDi 104 (403)
. ...++.+.+.+.|+++|++
T Consensus 176 -~----~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 176 -T----DIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp -S----CSHHHHHHHHHTTCSEEEE
T ss_pred -H----HHHHHHHHHHHcCCCEEEE
Confidence 1 1234566777889999998
No 361
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=84.02 E-value=20 Score=33.07 Aligned_cols=88 Identities=18% Similarity=0.222 Sum_probs=52.0
Q ss_pred CCeeEEEecc--cCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC---------------------chHHHHHHhc-CC
Q 015614 9 NTTMICAPLM--AQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP---------------------GKDLEIILTK-KP 64 (403)
Q Consensus 9 ~~~~icv~l~--~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~---------------------~~~l~~l~~~-~~ 64 (403)
+++.+...|+ .++.++....++...+.|+|+||+-+-+..+.-+ .+.++.+|+. .+
T Consensus 15 ~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~ 94 (268)
T 1qop_A 15 REGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPT 94 (268)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSS
T ss_pred CCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 4555555554 4455888888888778899999997755433211 0346667777 68
Q ss_pred CcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 015614 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYV 102 (403)
Q Consensus 65 ~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yv 102 (403)
+|+++-..... .+...- .++++.+.+.|++.+
T Consensus 95 ~Pv~lm~y~n~---v~~~g~---~~~~~~~~~aGadgi 126 (268)
T 1qop_A 95 IPIGLLMYANL---VFNNGI---DAFYARCEQVGVDSV 126 (268)
T ss_dssp SCEEEEECHHH---HHTTCH---HHHHHHHHHHTCCEE
T ss_pred CCEEEEEcccH---HHHhhH---HHHHHHHHHcCCCEE
Confidence 99876422110 000111 245566777777753
No 362
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=83.99 E-value=0.79 Score=44.61 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=29.6
Q ss_pred CeEEEEcchhHHHHHHHHHHHC--CCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~--g~~i~v~nR~~ 401 (403)
..++|+|+|.++.++++.|++. |.+|.|+.+..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 4699999999999999999987 88999998864
No 363
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=83.88 E-value=0.8 Score=50.94 Aligned_cols=33 Identities=27% Similarity=0.268 Sum_probs=31.0
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
+++++|||+|.+|.++++.|++.|. +|+|+.|.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 6789999999999999999999999 79999985
No 364
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=83.75 E-value=1 Score=46.53 Aligned_cols=37 Identities=14% Similarity=0.241 Sum_probs=34.0
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+.+|+++|||+|-+|--++.+|++.|.+|+++.|++
T Consensus 188 ~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 188 DFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred ccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 4578999999999999999999999998999999986
No 365
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=83.72 E-value=16 Score=35.40 Aligned_cols=157 Identities=11% Similarity=0.100 Sum_probs=97.3
Q ss_pred ecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCC-CCchHHHHHHhcC-CCcEEEEeecCCCCCCCCCCHHHHHHHHHH
Q 015614 16 PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNF-QPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLEALHL 93 (403)
Q Consensus 16 ~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~-~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 93 (403)
++...+.+++...+.++.+.|.|.+++.+-. .. ...+.++.+|+.. +.|+.+-. .|| | +.++-.++++.
T Consensus 142 ~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~--~~~~~~e~v~avr~a~gd~~l~vD~----n~~-~--~~~~a~~~~~~ 212 (384)
T 2pgw_A 142 FLQGETAEELARDAAVGHAQGERVFYLKVGR--GEKLDLEITAAVRGEIGDARLRLDA----NEG-W--SVHDAINMCRK 212 (384)
T ss_dssp ECCCSSHHHHHHHHHHHHHTTCCEEEEECCS--CHHHHHHHHHHHHTTSTTCEEEEEC----TTC-C--CHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHcCCCEEEECcCC--CHHHHHHHHHHHHHHcCCcEEEEec----CCC-C--CHHHHHHHHHH
Confidence 3445788999888888888999999998753 11 1124566666655 46655432 233 3 45666778888
Q ss_pred HHHcCCcEEEEeccccch---HHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEee-cCCHhHH
Q 015614 94 AEDLGADYVDFELKVASN---ILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS-VNDITEI 169 (403)
Q Consensus 94 ~~~~g~~yvDiEl~~~~~---~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~-~~~~~D~ 169 (403)
+-++|++||. --.+.+ ..+++... -.+.|++.=.. -+.+++.+.++ .-.+|++-+=.. .-.....
T Consensus 213 l~~~~i~~iE--qP~~~~~~~~~~~l~~~--~~iPI~~de~i----~~~~~~~~~i~---~~~~d~v~ik~~~~GGit~~ 281 (384)
T 2pgw_A 213 LEKYDIEFIE--QPTVSWSIPAMAHVREK--VGIPIVADQAA----FTLYDVYEICR---QRAADMICIGPREIGGIQPM 281 (384)
T ss_dssp HGGGCCSEEE--CCSCTTCHHHHHHHHHH--CSSCEEESTTC----CSHHHHHHHHH---TTCCSEEEECHHHHTSHHHH
T ss_pred HHhcCCCEEe--CCCChhhHHHHHHHHhh--CCCCEEEeCCc----CCHHHHHHHHH---cCCCCEEEEcchhhCCHHHH
Confidence 8888999965 333322 23344322 35666664322 12334433333 234788877444 3578888
Q ss_pred HHHHHHhccCCCCEEEEEcCccc
Q 015614 170 ARIFQLLSHCQVPIIAYSVGERG 192 (403)
Q Consensus 170 ~~ll~~~~~~~~p~i~~~MG~~G 192 (403)
.++.++....+.++..=+|.+.+
T Consensus 282 ~~i~~~A~~~g~~~~~~~~~es~ 304 (384)
T 2pgw_A 282 MKAAAVAEAAGLKICIHSSFTTG 304 (384)
T ss_dssp HHHHHHHHHTTCCEEECCCSCCH
T ss_pred HHHHHHHHHCCCeEeeccCcCCH
Confidence 89988888888887666666654
No 366
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=83.69 E-value=0.64 Score=44.65 Aligned_cols=33 Identities=33% Similarity=0.501 Sum_probs=29.0
Q ss_pred CCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecC
Q 015614 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 367 ~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~ 400 (403)
.|++++|+| +||.+.+++..++..|++|+++ ++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~ 183 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-AR 183 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eC
Confidence 578999999 6999999999999999988777 54
No 367
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=83.58 E-value=0.7 Score=45.56 Aligned_cols=37 Identities=22% Similarity=0.074 Sum_probs=32.0
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
..+++++|.|| |+.|++++..|.+.|.+|+++.|+.+
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 34679999996 88899999999888889999999764
No 368
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=83.55 E-value=0.91 Score=47.82 Aligned_cols=32 Identities=31% Similarity=0.463 Sum_probs=29.7
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
..|+|+|+|.+|.++|.+|++.|++|.|+.+.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~ 59 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLN 59 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEec
Confidence 56999999999999999999999999999875
No 369
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=83.43 E-value=0.72 Score=43.66 Aligned_cols=35 Identities=29% Similarity=0.336 Sum_probs=30.2
Q ss_pred CCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCCCC
Q 015614 368 GRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFGT 403 (403)
Q Consensus 368 ~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~~k 403 (403)
++ ++|.|+ |+.+.+++..++..|++|+.+.++.+|
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~ 183 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGREST 183 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 45 999998 999999999999999999988877553
No 370
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=83.39 E-value=29 Score=32.30 Aligned_cols=112 Identities=14% Similarity=0.179 Sum_probs=69.3
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEec--CCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLD--CINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG 98 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD--~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g 98 (403)
+..++. +.+...||++|=+--| ++.. ..+.+..+++..++|++ |. + |-.++. + ++.+...|
T Consensus 80 dp~~~A---~~y~~~GA~~IsVltd~~~f~G--s~~~L~~ir~~v~lPVl---~K--d---fi~d~~---q-i~ea~~~G 142 (272)
T 3tsm_A 80 DPPALA---KAYEEGGAACLSVLTDTPSFQG--APEFLTAARQACSLPAL---RK--D---FLFDPY---Q-VYEARSWG 142 (272)
T ss_dssp CHHHHH---HHHHHTTCSEEEEECCSTTTCC--CHHHHHHHHHTSSSCEE---EE--S---CCCSTH---H-HHHHHHTT
T ss_pred CHHHHH---HHHHHCCCCEEEEeccccccCC--CHHHHHHHHHhcCCCEE---EC--C---ccCCHH---H-HHHHHHcC
Confidence 444444 4445679999965433 2332 23578888888899998 32 2 212222 1 34567889
Q ss_pred CcEEEEeccccc-hHHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 99 ADYVDFELKVAS-NILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 99 ~~yvDiEl~~~~-~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
+|.|=+-....+ +.++++. ..+.-+..+++..|+ .+| ++++.++|+|++=+
T Consensus 143 AD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~------~eE----l~~A~~~ga~iIGi 195 (272)
T 3tsm_A 143 ADCILIIMASVDDDLAKELEDTAFALGMDALIEVHD------EAE----MERALKLSSRLLGV 195 (272)
T ss_dssp CSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECS------HHH----HHHHTTSCCSEEEE
T ss_pred CCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCC------HHH----HHHHHhcCCCEEEE
Confidence 999888765433 3445554 334568889999996 233 35666789998844
No 371
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=83.31 E-value=0.98 Score=45.49 Aligned_cols=36 Identities=42% Similarity=0.641 Sum_probs=32.1
Q ss_pred CCCCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEecC
Q 015614 365 PLAGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 365 ~~~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR~ 400 (403)
.+++|+++|-| +||.+++++..|.+.|++|++++|+
T Consensus 210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~ 246 (454)
T 3u0b_A 210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVD 246 (454)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999998 5899999999999999999999886
No 372
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=83.27 E-value=25 Score=31.50 Aligned_cols=91 Identities=12% Similarity=0.064 Sum_probs=57.2
Q ss_pred CCCeeEEEecccCCH--HHHHHHHHHHHhcCCCEEEEEecCCCCCC-----------------C----chHHHHHHhcCC
Q 015614 8 KNTTMICAPLMAQSV--EQVLSNMYQAKAEGADVVEIRLDCINNFQ-----------------P----GKDLEIILTKKP 64 (403)
Q Consensus 8 ~~~~~icv~l~~~~~--~e~~~~~~~~~~~~~D~vElRlD~l~~~~-----------------~----~~~l~~l~~~~~ 64 (403)
++++.++.+|+.-+. ++....++...+. +|.+|+-+-+-.+.- . .+.++.+++.++
T Consensus 2 ~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~ 80 (248)
T 1geq_A 2 FKDGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSS 80 (248)
T ss_dssp CCTTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC
T ss_pred CCCccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCC
Confidence 356677888877776 6888888777677 999998743322111 0 235566777778
Q ss_pred CcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015614 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (403)
Q Consensus 65 ~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiE 105 (403)
+|+.+-.+... .+... ..+.++.+++.|+++|=+-
T Consensus 81 ~pv~~~~~~~~---~~~~~---~~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 81 TPIVLMTYYNP---IYRAG---VRNFLAEAKASGVDGILVV 115 (248)
T ss_dssp CCEEEEECHHH---HHHHC---HHHHHHHHHHHTCCEEEET
T ss_pred CCEEEEeccch---hhhcC---HHHHHHHHHHCCCCEEEEC
Confidence 89887543100 00000 1346677888899998885
No 373
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=83.24 E-value=0.94 Score=46.90 Aligned_cols=32 Identities=19% Similarity=0.399 Sum_probs=29.6
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
..++|||+|-+|.++++.|++.|.+|.|+.+.
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~ 64 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAASGIKTGLIEMQ 64 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 46999999999999999999999999999875
No 374
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=83.11 E-value=0.85 Score=44.01 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=30.0
Q ss_pred CCeEEEEcchhHHHHH-HHHH-HHCCCe-EEEEecCCC
Q 015614 368 GRMFVLAGAGGAGRAL-AFGA-KSRGAR-VVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGaGGaarai-~~al-~~~g~~-i~v~nR~~~ 402 (403)
+++++|+|+|+.+.++ +..+ +.+|++ |+.+.++.+
T Consensus 173 ~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~ 210 (357)
T 2b5w_A 173 PSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDR 210 (357)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcc
Confidence 3899999999999999 8777 778995 999998765
No 375
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=82.94 E-value=0.83 Score=44.11 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=29.7
Q ss_pred CeEEEEcchhHHHHHHHHHHHC--CCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~--g~~i~v~nR~~ 401 (403)
..++|+|+|.++.++++.|++. |.+|.|+.+..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 3699999999999999999998 88999998854
No 376
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=82.93 E-value=18 Score=33.81 Aligned_cols=160 Identities=14% Similarity=0.168 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCC----CCCCchHHHHHH---h-cCCCcEEEEeecCCCCCCCCCCHHHHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCIN----NFQPGKDLEIIL---T-KKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~----~~~~~~~l~~l~---~-~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 92 (403)
+.+++++.+++..+.|||.|.+=--.-. ..+..+++.++. + .....+.+++-|. +-+..+
T Consensus 28 ~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT~------------~~~Va~ 95 (270)
T 4hb7_A 28 NVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDTF------------RSEVAE 95 (270)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEECS------------CHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEEECC------------CHHHHH
Confidence 4577888888888999999998533222 122234444432 1 1223345555542 346778
Q ss_pred HHHHcCCcEEE-Ee-ccccchHHHHHHhccCCCcEEEEeccCCCCCCCH--------hHHHHHHHHHHHcCCCEEEEEee
Q 015614 93 LAEDLGADYVD-FE-LKVASNILGKQYSSHQSGTRFIVSCNLDCETPSE--------EDLGYLVSRMQATGADIIKLVFS 162 (403)
Q Consensus 93 ~~~~~g~~yvD-iE-l~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~--------~~l~~~~~~~~~~gadivKia~~ 162 (403)
++++.|++.|- |- ....++.++ +.. ..+..+|+-| . .++|.. .++.+.++++.+.|.+-=+|..=
T Consensus 96 ~al~aGa~iINDVs~g~~d~~m~~-~va--~~~~~~vlMH-~-~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilD 170 (270)
T 4hb7_A 96 ACLKLGVDMINDQWAGLYDHRMFQ-IVA--KYDAEIILMH-N-GNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLD 170 (270)
T ss_dssp HHHHHTCCEEEETTTTSSCTHHHH-HHH--HTTCEEEEEC-C-CSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHhccceeccccccccchhHHH-HHH--HcCCCeEEec-c-ccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEe
Confidence 89999999874 43 223344443 332 3577888874 3 455643 22455567788888543356654
Q ss_pred -----cCCHhHHHHHHHHhc---cCCCCEEEEEcCccchhhhhh
Q 015614 163 -----VNDITEIARIFQLLS---HCQVPIIAYSVGERGLVSQLL 198 (403)
Q Consensus 163 -----~~~~~D~~~ll~~~~---~~~~p~i~~~MG~~G~~SRil 198 (403)
..+.++++.|++-+. ..+.|+ .++......+..++
T Consensus 171 PGiGFgKt~~~N~~ll~~l~~~~~lg~Pv-LvG~SRKsfig~~l 213 (270)
T 4hb7_A 171 PGIGFAKTRNEEAEVMARLDELVATEYPV-LLATSRKRFTKEMM 213 (270)
T ss_dssp CCTTSSCCHHHHHHHHTCHHHHHTTCSCB-EECCTTSHHHHHHH
T ss_pred CCCCcccccccHHHHHhhHHHHhcCCCCE-EEEecHHHHHHHHh
Confidence 478999999886654 346774 44555555444544
No 377
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=82.91 E-value=1.2 Score=45.88 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=33.7
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
...+|+++|||+|-+|--++.+|++.+.+|+++.|++
T Consensus 182 ~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 182 DFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred ccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 4568999999999999999999999988999999986
No 378
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=82.88 E-value=16 Score=32.84 Aligned_cols=150 Identities=14% Similarity=0.081 Sum_probs=77.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC----chHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQP----GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAED 96 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~----~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~ 96 (403)
+..++. +.+.+.|+|+|.++ |.-..... .+.++.+++..++|+|+. ||..+ . +-++.+++
T Consensus 32 d~~~~a---~~~~~~Gad~i~v~-d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~------Ggi~~--~----~~~~~~~~ 95 (252)
T 1ka9_F 32 DPVEAA---RAYDEAGADELVFL-DISATHEERAILLDVVARVAERVFIPLTVG------GGVRS--L----EDARKLLL 95 (252)
T ss_dssp CHHHHH---HHHHHHTCSCEEEE-ECCSSTTCHHHHHHHHHHHHTTCCSCEEEE------SSCCS--H----HHHHHHHH
T ss_pred CHHHHH---HHHHHcCCCEEEEE-cCCccccCccccHHHHHHHHHhCCCCEEEE------CCcCC--H----HHHHHHHH
Confidence 444444 44456799999988 64322111 234666777779999984 44432 2 23455666
Q ss_pred cCCcEEEEecccc--chHHHHHHhccC-CCcEEEEeccCC-----CCCCCH-----hHHHHHHHHHHHcCCCEEEEEeec
Q 015614 97 LGADYVDFELKVA--SNILGKQYSSHQ-SGTRFIVSCNLD-----CETPSE-----EDLGYLVSRMQATGADIIKLVFSV 163 (403)
Q Consensus 97 ~g~~yvDiEl~~~--~~~~~~l~~~~~-~~~kiI~S~H~f-----~~tp~~-----~~l~~~~~~~~~~gadivKia~~~ 163 (403)
.|++.|=+--... ++.+.++..... ....+-+|.|.. -.+-.| ....+..+++.+.|++.+=+....
T Consensus 96 ~Gad~V~lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~ 175 (252)
T 1ka9_F 96 SGADKVSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMD 175 (252)
T ss_dssp HTCSEEEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETT
T ss_pred cCCCEEEEChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEeccc
Confidence 7899887743332 233444432211 123455555420 001111 234666777777898865443222
Q ss_pred CC----HhHHHHHHHHhccCCCCEEEE
Q 015614 164 ND----ITEIARIFQLLSHCQVPIIAY 186 (403)
Q Consensus 164 ~~----~~D~~~ll~~~~~~~~p~i~~ 186 (403)
.+ ..|...+-++....+.|+|+.
T Consensus 176 ~~g~~~g~~~~~i~~l~~~~~ipvia~ 202 (252)
T 1ka9_F 176 RDGTKEGYDLRLTRMVAEAVGVPVIAS 202 (252)
T ss_dssp TTTTCSCCCHHHHHHHHHHCSSCEEEE
T ss_pred CCCCcCCCCHHHHHHHHHHcCCCEEEe
Confidence 21 113333344444457888764
No 379
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=82.80 E-value=0.58 Score=46.96 Aligned_cols=36 Identities=25% Similarity=0.203 Sum_probs=30.5
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..|++++|+|+ ||.+.+++..++..|++++++.++.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~ 263 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSP 263 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH
Confidence 35789999998 9999999999999999877776654
No 380
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=82.74 E-value=32 Score=32.38 Aligned_cols=121 Identities=12% Similarity=0.097 Sum_probs=73.0
Q ss_pred HHHHHHHhcCCCEEEEEecCCCCCCCchHH---HHHHh---cCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 015614 27 SNMYQAKAEGADVVEIRLDCINNFQPGKDL---EIILT---KKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGAD 100 (403)
Q Consensus 27 ~~~~~~~~~~~D~vElRlD~l~~~~~~~~l---~~l~~---~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~ 100 (403)
.++++++..|||.|=+++..=.+. ..+.+ ..+++ ...+|+|+-. ..|+....+++.-...-+.+.++|+|
T Consensus 129 ~~ve~Av~~GAdaV~~~i~~Gs~~-~~~~l~~i~~v~~~a~~~GlpvIie~---~~G~~~~~d~e~i~~aariA~elGAD 204 (295)
T 3glc_A 129 LSMDDAVRLNSCAVAAQVYIGSEY-EHQSIKNIIQLVDAGMKVGMPTMAVT---GVGKDMVRDQRYFSLATRIAAEMGAQ 204 (295)
T ss_dssp SCHHHHHHTTCSEEEEEECTTSTT-HHHHHHHHHHHHHHHHTTTCCEEEEE---CC----CCSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHCCCCEEEEEEECCCCc-HHHHHHHHHHHHHHHHHcCCEEEEEC---CCCCccCCCHHHHHHHHHHHHHhCCC
Confidence 345666789999999998865332 12233 33432 3479988753 23555444444333456778899999
Q ss_pred EEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEE
Q 015614 101 YVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIK 158 (403)
Q Consensus 101 yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivK 158 (403)
||=..+. .+.++++... ....||+|=-. .+ +.++..+.+..+.+.||+-+=
T Consensus 205 ~VKt~~t--~e~~~~vv~~--~~vPVv~~GG~--~~-~~~~~l~~v~~ai~aGA~Gv~ 255 (295)
T 3glc_A 205 IIKTYYV--EKGFERIVAG--CPVPIVIAGGK--KL-PEREALEMCWQAIDQGASGVD 255 (295)
T ss_dssp EEEEECC--TTTHHHHHHT--CSSCEEEECCS--CC-CHHHHHHHHHHHHHTTCSEEE
T ss_pred EEEeCCC--HHHHHHHHHh--CCCcEEEEECC--CC-CHHHHHHHHHHHHHhCCeEEE
Confidence 9998864 2345566533 34667776321 12 357788888888888987443
No 381
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=82.61 E-value=0.82 Score=50.78 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=31.8
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
+.+.+|+|+|+||.|..++..|...|+ +|+|++.+
T Consensus 25 L~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D 60 (1015)
T 3cmm_A 25 MQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPE 60 (1015)
T ss_dssp HTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCS
T ss_pred HhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCC
Confidence 456899999999999999999999999 99999864
No 382
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=82.59 E-value=4.7 Score=37.16 Aligned_cols=149 Identities=17% Similarity=0.180 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHh--cCCCcEEEEeecCCCCCCCC-CCHHHHHHHHHHHHHcC
Q 015614 22 VEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILT--KKPLPVLIVYRPKWAGGLYE-GDEHKRLEALHLAEDLG 98 (403)
Q Consensus 22 ~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~--~~~~PiI~T~R~~~eGG~~~-~~~~~~~~ll~~~~~~g 98 (403)
.++....++.+.+.|+++|+.-- ..+....+ ..+.|+++.+.....- ++ ...+...+..+.+++.|
T Consensus 44 ~~~~~~~~~~~~~~g~~~i~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~--~~d~~~~~~~~~v~~a~~~G 112 (273)
T 2qjg_A 44 LIDIRKTVNDVAEGGANAVLLHK---------GIVRHGHRGYGKDVGLIIHLSGGTAI--SPNPLKKVIVTTVEEAIRMG 112 (273)
T ss_dssp SSSHHHHHHHHHHHTCSEEEECH---------HHHHSCCCSSSCCCEEEEECEECCTT--SSSTTCCEECSCHHHHHHTT
T ss_pred hhhHHHHHHHHHhcCCCEEEeCH---------HHHHHHHHhhcCCCCEEEEEcCCCcC--CCCcccchHHHHHHHHHHcC
Confidence 34444555666678999998511 11221111 1367888887742210 10 11111233456788899
Q ss_pred CcEEEEeccccc-------hHHHHHH-hccCCCcEEEEec-----cCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCC
Q 015614 99 ADYVDFELKVAS-------NILGKQY-SSHQSGTRFIVSC-----NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVND 165 (403)
Q Consensus 99 ~~yvDiEl~~~~-------~~~~~l~-~~~~~~~kiI~S~-----H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~~ 165 (403)
++.||+.+.... +..+++. ..++.+.++|+-. |. ...-+.+++.+..+.+.+.|+|++|+-. +.
T Consensus 113 a~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l-~~~~~~~~~~~~a~~a~~~Gad~i~~~~-~~- 189 (273)
T 2qjg_A 113 ADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHI-QNERDPELVAHAARLGAELGADIVKTSY-TG- 189 (273)
T ss_dssp CSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTC-SCTTCHHHHHHHHHHHHHTTCSEEEECC-CS-
T ss_pred CCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCccc-CCCCCHhHHHHHHHHHHHcCCCEEEECC-CC-
Confidence 999977653321 1223333 2233456666532 21 1111234555555788899999999874 22
Q ss_pred HhHHHHHHHHhccCCCCEEEE
Q 015614 166 ITEIARIFQLLSHCQVPIIAY 186 (403)
Q Consensus 166 ~~D~~~ll~~~~~~~~p~i~~ 186 (403)
|...+.++....+.|+++.
T Consensus 190 --~~~~l~~i~~~~~ipvva~ 208 (273)
T 2qjg_A 190 --DIDSFRDVVKGCPAPVVVA 208 (273)
T ss_dssp --SHHHHHHHHHHCSSCEEEE
T ss_pred --CHHHHHHHHHhCCCCEEEE
Confidence 3333333333446787764
No 383
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=82.57 E-value=0.67 Score=44.41 Aligned_cols=36 Identities=31% Similarity=0.405 Sum_probs=30.1
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCC-CeEEEEecCCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFG 402 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g-~~i~v~nR~~~ 402 (403)
.+++++|+|+|+.+.+++..++.+| .+|+.+.++.+
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~ 207 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDD 207 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence 4789999999999999988887775 59998887653
No 384
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=82.54 E-value=1.4 Score=45.29 Aligned_cols=38 Identities=26% Similarity=0.361 Sum_probs=34.8
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.++++.|+|.|-.|++++..|...|++|++++|+.
T Consensus 138 ~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~ 175 (529)
T 1ygy_A 138 TEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYV 175 (529)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred cccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCC
Confidence 35778999999999999999999999999999999875
No 385
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=82.35 E-value=3.4 Score=40.28 Aligned_cols=86 Identities=13% Similarity=0.154 Sum_probs=58.6
Q ss_pred CeeEEEecccCCHHHHHHHHHHHH---hcCCCEEEEEecCCC-----CC--CC---chHHHHHHhcCCCcEEEEeecCCC
Q 015614 10 TTMICAPLMAQSVEQVLSNMYQAK---AEGADVVEIRLDCIN-----NF--QP---GKDLEIILTKKPLPVLIVYRPKWA 76 (403)
Q Consensus 10 ~~~icv~l~~~~~~e~~~~~~~~~---~~~~D~vElRlD~l~-----~~--~~---~~~l~~l~~~~~~PiI~T~R~~~e 76 (403)
.| +.++|.+.+.+|...-++... ..|+|+|||=+-+=. .+ ++ .+.++.+++..++|+++-+|..
T Consensus 127 ~p-vivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~-- 203 (354)
T 4ef8_A 127 KP-LFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPY-- 203 (354)
T ss_dssp CC-EEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCC--
T ss_pred Cc-EEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCC--
Confidence 44 678999999999887776654 458999999876411 11 11 1234445566799999999963
Q ss_pred CCCCCCCHHHHHHHHHHHHHcC-CcEEE
Q 015614 77 GGLYEGDEHKRLEALHLAEDLG-ADYVD 103 (403)
Q Consensus 77 GG~~~~~~~~~~~ll~~~~~~g-~~yvD 103 (403)
.++++..++.+.+.+.| ++.|-
T Consensus 204 -----~d~~~~~~~a~~~~~~Gg~d~I~ 226 (354)
T 4ef8_A 204 -----FDFAHFDAAAEILNEFPKVQFIT 226 (354)
T ss_dssp -----CSHHHHHHHHHHHHTCTTEEEEE
T ss_pred -----CCHHHHHHHHHHHHhCCCccEEE
Confidence 24556666677777787 88764
No 386
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=82.33 E-value=7.7 Score=35.39 Aligned_cols=144 Identities=15% Similarity=0.115 Sum_probs=86.8
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHH--HHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHc
Q 015614 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEI--ILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97 (403)
Q Consensus 20 ~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~--l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~ 97 (403)
.+.+++.+..+++.+.+++.|=+ ++. .+.. ..+.+++++ .|+=.=+.|-. +-+.+..=.+.+++.
T Consensus 26 ~t~~~i~~lc~eA~~~~~~aVcV--------~p~-~v~~a~~l~~~~v~v-~tVigFP~G~~---~~~~K~~E~~~Ai~~ 92 (231)
T 3ndo_A 26 ATPSDVTALVDEAADLGVFAVCV--------SPP-LVSVAAGVAPSGLAI-AAVAGFPSGKH---VPGIKATEAELAVAA 92 (231)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEE--------CGG-GHHHHHHHCCTTCEE-EEEESTTTCCS---CHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCcEEEE--------CHH-HHHHHHHhcCCCCeE-EEEecCCCCCC---cHHHHHHHHHHHHHc
Confidence 45678888888888888887765 221 2222 222234333 34433223222 335566566789999
Q ss_pred CCcEEEEeccccc----------hHHHHHHhc-cCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEe-----
Q 015614 98 GADYVDFELKVAS----------NILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF----- 161 (403)
Q Consensus 98 g~~yvDiEl~~~~----------~~~~~l~~~-~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~----- 161 (403)
|++-||+=++... +.+..+... +....|+|+--.......+.+++....+-+.+.|||+||--+
T Consensus 93 GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~~~ 172 (231)
T 3ndo_A 93 GATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFHPS 172 (231)
T ss_dssp TCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCCTT
T ss_pred CCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCCCC
Confidence 9999998665521 122333322 223568888765431112457788888888899999999874
Q ss_pred ecCCHhHHHHHHHHh
Q 015614 162 SVNDITEIARIFQLL 176 (403)
Q Consensus 162 ~~~~~~D~~~ll~~~ 176 (403)
-..+.+|+..+.+..
T Consensus 173 ~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 173 GGASVQAVEIMARTV 187 (231)
T ss_dssp CSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHh
Confidence 234677876666553
No 387
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=82.31 E-value=15 Score=33.54 Aligned_cols=127 Identities=18% Similarity=0.239 Sum_probs=72.8
Q ss_pred HHHHHHHhcCCCEE--EEEecCCCCCCCchHHHHHH---hcCCCcEEEEeecCCCCCCCC--CCHHHHHHHHHHHHHcCC
Q 015614 27 SNMYQAKAEGADVV--EIRLDCINNFQPGKDLEIIL---TKKPLPVLIVYRPKWAGGLYE--GDEHKRLEALHLAEDLGA 99 (403)
Q Consensus 27 ~~~~~~~~~~~D~v--ElRlD~l~~~~~~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~--~~~~~~~~ll~~~~~~g~ 99 (403)
.+++.++..|+|.| -+|.-........+.+..+. +..++|+|+-.- ..|...+ .+.+...++.+.+.+.|+
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~--~~G~~l~~~~~~~~~~~~a~~a~~~Ga 180 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMY--PRGKHIQNERDPELVAHAARLGAELGA 180 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEE--ECSTTCSCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeC--CCCcccCCCCCHhHHHHHHHHHHHcCC
Confidence 34556677899999 66655432110011223333 334788887542 2233221 234444445578889999
Q ss_pred cEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 100 DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 100 ~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
+||=+......+.++++... -...+|++== -.+++.++..+.+.++.+.|++-+=+
T Consensus 181 d~i~~~~~~~~~~l~~i~~~--~~ipvva~GG--i~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 181 DIVKTSYTGDIDSFRDVVKG--CPAPVVVAGG--PKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp SEEEECCCSSHHHHHHHHHH--CSSCEEEECC--SCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CEEEECCCCCHHHHHHHHHh--CCCCEEEEeC--CCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 99988753333455555532 2466777532 12334678888888888899984443
No 388
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=82.04 E-value=0.76 Score=45.66 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=30.1
Q ss_pred CeEEEEcchhHHHHHHHHHHHCC-----CeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRG-----ARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g-----~~i~v~nR~~ 401 (403)
..++|||+|-++.+++..|.+.| .+|+|+.+..
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~ 68 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQG 68 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCS
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCC
Confidence 36999999999999999999999 8999998864
No 389
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=82.03 E-value=1.4 Score=48.09 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=31.3
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
.+++++|||+|-++.++++.|.+.|.+|+|+.+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~ 310 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR 310 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEec
Confidence 4679999999999999999999999999999865
No 390
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=81.98 E-value=1.1 Score=48.39 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=30.4
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
+++++|||+|-+|.++++.|.+.|.+|.|+.+.
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~ 368 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAK 368 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 578999999999999999999999999999864
No 391
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=81.97 E-value=3.4 Score=41.51 Aligned_cols=50 Identities=22% Similarity=0.237 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEE
Q 015614 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397 (403)
Q Consensus 339 ~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~ 397 (403)
++|.+..++..+... +..++|++++|=|.|-+|..++.-|.++|++|..+
T Consensus 215 g~Gv~~~~~~~~~~~---------~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVav 264 (450)
T 4fcc_A 215 GYGLVYFTEAMLKRH---------GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITA 264 (450)
T ss_dssp HHHHHHHHHHHHHHT---------TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred eeeHHHHHHHHHHHc---------CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEE
Confidence 668788877776532 25678999999999999999999999999976543
No 392
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=81.93 E-value=8.4 Score=36.02 Aligned_cols=107 Identities=18% Similarity=0.185 Sum_probs=59.6
Q ss_pred HHHhcCCCEEEEE--ecC----CCC---CCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 015614 31 QAKAEGADVVEIR--LDC----INN---FQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADY 101 (403)
Q Consensus 31 ~~~~~~~D~vElR--lD~----l~~---~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~y 101 (403)
.+.+.|+++|++| ++. +.. ....+.++.+++.+++|+++..+.. + .+.++.+.+.|+++
T Consensus 36 ~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~--------~----~~~~~~~~~aGad~ 103 (297)
T 2zbt_A 36 IAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIG--------H----FVEAMILEAIGVDF 103 (297)
T ss_dssp HHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETT--------C----HHHHHHHHHTTCSE
T ss_pred HHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccC--------C----HHHHHHHHHCCCCE
Confidence 3445799999996 221 111 1123567778877899999876632 1 23455667789999
Q ss_pred EEEeccc-cchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015614 102 VDFELKV-ASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 102 vDiEl~~-~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia 160 (403)
||.-... ..++.+.+... ....-++...|+ .++. .++.+.|+|++.+-
T Consensus 104 v~~~~~~~~~~~~~~~~~~-~~~i~l~~~v~~------~~~~----~~a~~~Gad~I~v~ 152 (297)
T 2zbt_A 104 IDESEVLTPADEEHHIDKW-KFKVPFVCGARN------LGEA----LRRIAEGAAMIRTK 152 (297)
T ss_dssp EEEETTSCCSCSSCCCCGG-GCSSCEEEEESS------HHHH----HHHHHTTCSEEEEC
T ss_pred EeeeCCCChHHHHHHHHHh-CCCceEEeecCC------HHHH----HHHHHcCCCEEEEc
Confidence 9754322 12222222111 124445555553 2332 33567899997654
No 393
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=81.81 E-value=1.2 Score=44.89 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=29.7
Q ss_pred CeEEEEcchhHHHHHHHHHHHC--CCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~--g~~i~v~nR~~ 401 (403)
++++|||+|-++.+++..|+++ |.+|+|+.+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 71 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGE 71 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5899999999999999999986 77999998864
No 394
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=81.73 E-value=1.5 Score=41.61 Aligned_cols=36 Identities=14% Similarity=0.349 Sum_probs=31.1
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+.+++++|+|+|-+|--++..|.+.|.+|+++.|..
T Consensus 164 ~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 164 FNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred cCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 357899999999999999999999999999998863
No 395
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=81.71 E-value=2.6 Score=38.03 Aligned_cols=36 Identities=25% Similarity=0.331 Sum_probs=24.3
Q ss_pred CCeEEEEcchhHHHHHHHH--HHHCCC-eEEEEecCCCC
Q 015614 368 GRMFVLAGAGGAGRALAFG--AKSRGA-RVVIFDIDFGT 403 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~a--l~~~g~-~i~v~nR~~~k 403 (403)
..+++|+|+|.+|++++.. ....|+ -+-+++++++|
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k 123 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESK 123 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTT
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHH
Confidence 3579999999999999885 334577 46788888764
No 396
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=81.65 E-value=19 Score=31.60 Aligned_cols=146 Identities=10% Similarity=-0.002 Sum_probs=90.3
Q ss_pred EEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHH
Q 015614 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92 (403)
Q Consensus 13 icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 92 (403)
+|+++-..++++.++.+++. ......+++=..++....+ +.++.+|+..+.++++-+-.- +... .-.+..+
T Consensus 2 lila~D~~~l~~~~~~~~~~-~~~~~~~kv~~~~f~~~G~-~~i~~lr~~~~~~v~~D~kl~------DI~~-t~~~~v~ 72 (208)
T 2czd_A 2 IVLALDVYEGERAIKIAKSV-KDYISMIKVNWPLILGSGV-DIIRRLKEETGVEIIADLKLA------DIPN-TNRLIAR 72 (208)
T ss_dssp EEEECCCCSHHHHHHHHHHH-GGGCSEEEEEHHHHHHHCT-THHHHHHHHHCCEEEEEEEEC------SCHH-HHHHHHH
T ss_pred eEEEecCCCHHHHHHHHHHh-cccccEEEecHHHHHhhCH-HHHHHHHHcCCCEEEEEeeeC------chHH-HHHHHHH
Confidence 68999999999999888775 3346778887777743333 367777765356777666642 1111 1123556
Q ss_pred HHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCC-----HhHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 015614 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPS-----EEDLGYLVSRMQATGADIIKLVFSVNDIT 167 (403)
Q Consensus 93 ~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~-----~~~l~~~~~~~~~~gadivKia~~~~~~~ 167 (403)
.++++|+|+|-+-.....+.++.++.. .+.-+..+. ..+. .+.+........+.|+|.+|+ .+..++
T Consensus 73 ~~~~~Gad~vtvh~~~g~~~i~~~~~~--~gv~vl~~t----~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~--~~~~~~ 144 (208)
T 2czd_A 73 KVFGAGADYVIVHTFVGRDSVMAVKEL--GEIIMVVEM----SHPGALEFINPLTDRFIEVANEIEPFGVIA--PGTRPE 144 (208)
T ss_dssp HHHHTTCSEEEEESTTCHHHHHHHHTT--SEEEEECCC----CSGGGGTTTGGGHHHHHHHHHHHCCSEEEC--CCSSTH
T ss_pred HHHhcCCCEEEEeccCCHHHHHHHHHh--CCcEEEEec----CCcchhhHHHHHHHHHHHHHHHhCCcEEEE--CCCChH
Confidence 778899999999888776666655422 233333331 1111 233555666777889998864 455565
Q ss_pred HHHHHHHH
Q 015614 168 EIARIFQL 175 (403)
Q Consensus 168 D~~~ll~~ 175 (403)
+...+-+.
T Consensus 145 ~i~~lr~~ 152 (208)
T 2czd_A 145 RIGYIRDR 152 (208)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 65444433
No 397
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=81.46 E-value=34 Score=31.78 Aligned_cols=150 Identities=10% Similarity=0.136 Sum_probs=88.7
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCC----C-CCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINN----F-QPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAE 95 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~----~-~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~ 95 (403)
+.++.++-++.+.+.|++.||.---.-.+ . +..+.++.+++..+.|+..-+ . + .+-++.++
T Consensus 24 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~---------n----~~~i~~a~ 89 (295)
T 1ydn_A 24 PTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-P---------N----MKGYEAAA 89 (295)
T ss_dssp CHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-S---------S----HHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-C---------C----HHHHHHHH
Confidence 45666666777777899999996311111 0 112333344333356664433 1 1 24467888
Q ss_pred HcCCcEEEEecccc------------chHHH---HHH-hccCCCcEEE--Eecc----CCCCCCCHhHHHHHHHHHHHcC
Q 015614 96 DLGADYVDFELKVA------------SNILG---KQY-SSHQSGTRFI--VSCN----LDCETPSEEDLGYLVSRMQATG 153 (403)
Q Consensus 96 ~~g~~yvDiEl~~~------------~~~~~---~l~-~~~~~~~kiI--~S~H----~f~~tp~~~~l~~~~~~~~~~g 153 (403)
+.|++.|-+..... ++.++ +.+ ..++.+.++- +|+- +...+ +.+++.++++++.+.|
T Consensus 90 ~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~-~~~~~~~~~~~~~~~G 168 (295)
T 1ydn_A 90 AAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPV-TPQAVASVTEQLFSLG 168 (295)
T ss_dssp HTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEEC-CHHHHHHHHHHHHHHT
T ss_pred HCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCC-CHHHHHHHHHHHHhcC
Confidence 89999988875332 11121 222 3445667775 3321 00112 4578999999999999
Q ss_pred CCEEEEEeec--CCHhHHHHHHHHhccC-C-CCEEE
Q 015614 154 ADIIKLVFSV--NDITEIARIFQLLSHC-Q-VPIIA 185 (403)
Q Consensus 154 adivKia~~~--~~~~D~~~ll~~~~~~-~-~p~i~ 185 (403)
+|.+-++-+. .++.+..++++.+.+. + .|+..
T Consensus 169 ~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~ 204 (295)
T 1ydn_A 169 CHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAG 204 (295)
T ss_dssp CSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEE
T ss_pred CCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEE
Confidence 9999998544 3688888888876543 3 45543
No 398
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=81.29 E-value=1.1 Score=46.35 Aligned_cols=34 Identities=35% Similarity=0.594 Sum_probs=30.6
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
...++|+|+|.++.++++.|++.|.+|+|+.+..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~ 159 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEP 159 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 4579999999999999999999999999998753
No 399
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=81.24 E-value=0.67 Score=49.64 Aligned_cols=35 Identities=14% Similarity=0.180 Sum_probs=32.0
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
-+++.|||+|-+|.+++..|++.|.+|++++|+++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 36799999999999999999999999999999854
No 400
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=81.13 E-value=0.69 Score=49.43 Aligned_cols=35 Identities=26% Similarity=0.422 Sum_probs=32.1
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
-+++.|||+|-+|.+++..|++.|.+|++++|+++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 46799999999999999999999999999999854
No 401
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=81.07 E-value=2 Score=35.89 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=30.5
Q ss_pred CCCeEEEEcc----hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGA----GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGa----GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+.+++.|+|+ |-.++.++..|.+.|.+|+.+|++.
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~ 51 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY 51 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC
Confidence 4578999999 9999999999999999988888764
No 402
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=81.01 E-value=11 Score=35.68 Aligned_cols=86 Identities=10% Similarity=0.088 Sum_probs=61.0
Q ss_pred eEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCC----------C--CC---chHHHHHHhcCCCcEEEEeecCCC
Q 015614 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINN----------F--QP---GKDLEIILTKKPLPVLIVYRPKWA 76 (403)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~----------~--~~---~~~l~~l~~~~~~PiI~T~R~~~e 76 (403)
.+.+.|.+.+.+++..-++.+.+. +|.|||-+.+=.. + ++ .+.++.+++..+.|+.+-+|.
T Consensus 60 ~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--- 135 (318)
T 1vhn_A 60 NVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRL--- 135 (318)
T ss_dssp TEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEES---
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecC---
Confidence 357888899999998888888777 9999998875321 0 11 134556666678898888886
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015614 77 GGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (403)
Q Consensus 77 GG~~~~~~~~~~~ll~~~~~~g~~yvDiE 105 (403)
|. ...+ -.++.+.+.+.|+++|.|.
T Consensus 136 -G~-~~~~--~~~~a~~l~~~G~d~i~v~ 160 (318)
T 1vhn_A 136 -GW-EKNE--VEEIYRILVEEGVDEVFIH 160 (318)
T ss_dssp -CS-SSCC--HHHHHHHHHHTTCCEEEEE
T ss_pred -CC-ChHH--HHHHHHHHHHhCCCEEEEc
Confidence 32 2222 2277888889999999985
No 403
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=80.99 E-value=4.8 Score=39.18 Aligned_cols=90 Identities=13% Similarity=0.130 Sum_probs=52.6
Q ss_pred cccCCHHHH----HHHHHHHHhcCCCEEEEEecC-------CCC----CCC-------------chHHHHHHhcCC-CcE
Q 015614 17 LMAQSVEQV----LSNMYQAKAEGADVVEIRLDC-------INN----FQP-------------GKDLEIILTKKP-LPV 67 (403)
Q Consensus 17 l~~~~~~e~----~~~~~~~~~~~~D~vElRlD~-------l~~----~~~-------------~~~l~~l~~~~~-~Pi 67 (403)
++..++++. ...++.+.+.|+|.|||-.-+ +.+ ..+ .+.++.+|+... -||
T Consensus 151 mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v 230 (364)
T 1vyr_A 151 LELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRI 230 (364)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcE
Confidence 444444444 333444567899999997632 111 011 133556666552 277
Q ss_pred EEEeecC--CCCC-CCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015614 68 LIVYRPK--WAGG-LYEGDEHKRLEALHLAEDLGADYVDFEL 106 (403)
Q Consensus 68 I~T~R~~--~eGG-~~~~~~~~~~~ll~~~~~~g~~yvDiEl 106 (403)
.+-++.. .+|. ....+.++..++.+.+.+.|++||++-.
T Consensus 231 ~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 272 (364)
T 1vyr_A 231 GIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSE 272 (364)
T ss_dssp EEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEec
Confidence 7766654 2220 1122446788888999999999999864
No 404
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=80.96 E-value=36 Score=31.75 Aligned_cols=147 Identities=14% Similarity=0.126 Sum_probs=84.8
Q ss_pred hcCCCEEEEEecCCC-------CC---CCch---HHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 015614 34 AEGADVVEIRLDCIN-------NF---QPGK---DLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGAD 100 (403)
Q Consensus 34 ~~~~D~vElRlD~l~-------~~---~~~~---~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~ 100 (403)
+.|+|++ +-=|.+. +. +..+ ..+.+++..+.|+|+ .-. .-|.+..+.++-++-..+.++.|++
T Consensus 35 ~aG~d~i-lvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~--pfgsy~~s~~~a~~na~rl~kaGa~ 110 (275)
T 1o66_A 35 DAGVEML-LVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIV-SDL--PFGAYQQSKEQAFAAAAELMAAGAH 110 (275)
T ss_dssp HTTCCEE-EECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEE-EEC--CTTSSSSCHHHHHHHHHHHHHTTCS
T ss_pred HcCCCEE-EECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEE-EEC--CCCCccCCHHHHHHHHHHHHHcCCc
Confidence 4699999 7556542 11 1122 333455667877776 332 3344556676666666677888999
Q ss_pred EEEEeccccchHHHHHHhccCCCcEEEEe-------ccC---C---CCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 015614 101 YVDFELKVASNILGKQYSSHQSGTRFIVS-------CNL---D---CETPSEEDLGYLVSRMQATGADIIKLVFSVNDIT 167 (403)
Q Consensus 101 yvDiEl~~~~~~~~~l~~~~~~~~kiI~S-------~H~---f---~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~ 167 (403)
.|-||-.. +....+......++.+++. .|. | -+|-..+++.+.....++.|||.+=+=..+ +
T Consensus 111 aVklEdg~--e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp---~ 185 (275)
T 1o66_A 111 MVKLEGGV--WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMECVL---A 185 (275)
T ss_dssp EEEEECSG--GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEEEEESCC---H
T ss_pred EEEECCcH--HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEecCC---H
Confidence 99999753 2222232222234444421 121 1 122223667777778888999988776654 2
Q ss_pred HHHHHHHHhccCCCCEEEEEcCcc
Q 015614 168 EIARIFQLLSHCQVPIIAYSVGER 191 (403)
Q Consensus 168 D~~~ll~~~~~~~~p~i~~~MG~~ 191 (403)
++. -+++...++|+|.|+-|+.
T Consensus 186 ~~a--~~it~~l~iP~igIGaG~~ 207 (275)
T 1o66_A 186 ELA--KKVTETVSCPTIGIGAGAD 207 (275)
T ss_dssp HHH--HHHHHHCSSCEEEESSCSC
T ss_pred HHH--HHHHHhCCCCEEEECCCCC
Confidence 332 2445556799999887764
No 405
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=80.94 E-value=1.3 Score=45.27 Aligned_cols=32 Identities=25% Similarity=0.350 Sum_probs=28.9
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEec
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDI 399 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR 399 (403)
...++|+|+|.+|.+++..|++.|.++.|+.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~ 243 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE 243 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 45799999999999999999999999888865
No 406
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=80.81 E-value=14 Score=35.11 Aligned_cols=103 Identities=12% Similarity=0.106 Sum_probs=68.4
Q ss_pred CCCCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHH
Q 015614 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85 (403)
Q Consensus 6 ~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~ 85 (403)
|...++.+||.+-.++.++++..++.. ...++.+++-+.++....+ +.+..|++..+.++++=+..- +...
T Consensus 20 ~~~k~~~LiVALD~~~~~eal~l~~~l-~~~v~~vKVG~~lf~~~G~-~~V~~Lk~~~g~~IflDlKl~------DIpn- 90 (303)
T 3ru6_A 20 FQSNAMKLCVALDLSTKEECLQLAKEL-KNLDIWLKVGLRAYLRDGF-KFIEELKKVDDFKIFLDLKFH------DIPN- 90 (303)
T ss_dssp ----CCEEEEECCCSSHHHHHHHHHHT-TTSSCEEEECHHHHHHHTH-HHHHHHHHHCCCEEEEEEEEC------SCHH-
T ss_pred HHhcCCCEEEEeCCCCHHHHHHHHHHh-CCCccEEEeCHHHHHHhCH-HHHHHHHHhhCCCEEEEeeec------cCch-
Confidence 566788899999999999999888775 4558999998777653332 356677665577888777642 2221
Q ss_pred HHHHHHHHHHHcCCcEEEEeccccchHHHHHH
Q 015614 86 KRLEALHLAEDLGADYVDFELKVASNILGKQY 117 (403)
Q Consensus 86 ~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~ 117 (403)
--....+.+.++|++++-+=-....+.++..+
T Consensus 91 Tv~~av~~~a~lGaD~vTVHa~~G~~~m~aa~ 122 (303)
T 3ru6_A 91 TMADACEEVSKLGVDMINIHASAGKIAIQEVM 122 (303)
T ss_dssp HHHHHHHHHHTTTCSEEEEEGGGCHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCEEEEeccCCHHHHHHHH
Confidence 11123456788999999997766665555444
No 407
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=80.44 E-value=2.7 Score=42.49 Aligned_cols=52 Identities=13% Similarity=0.149 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeEE-EEec
Q 015614 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDI 399 (403)
Q Consensus 339 ~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i~-v~nR 399 (403)
+.|....++..+... +..++|++++|-|.|.+|..++.-|.++|++|. |.+.
T Consensus 232 g~Gv~~~~~~~l~~~---------G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~ 284 (470)
T 2bma_A 232 GYGLVYFVLEVLKSL---------NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDS 284 (470)
T ss_dssp HHHHHHHHHHHHHTT---------TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEET
T ss_pred hHHHHHHHHHHHHhc---------cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeC
Confidence 568888888877632 245789999999999999999999999999654 6664
No 408
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=80.36 E-value=1.1 Score=45.19 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=30.6
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCC---CeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRG---ARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g---~~i~v~nR~~ 401 (403)
.++++|||+|-++.+++..|++.| .+|+|+.++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 368999999999999999999988 7999999864
No 409
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=80.21 E-value=1.7 Score=44.10 Aligned_cols=38 Identities=13% Similarity=0.176 Sum_probs=32.3
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHC--CCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~--g~~i~v~nR~~ 401 (403)
..++||+|+|||+|-+|-=|+..|++. +.+|+++-|++
T Consensus 242 ~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 242 DKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 346799999999999999999999865 45899999874
No 410
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=80.19 E-value=6.4 Score=38.33 Aligned_cols=84 Identities=12% Similarity=0.023 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhcCCCEEEEEecC------------------CCCC-C--C---chHHHHHHhcCC-CcEEEEeecC-CCC
Q 015614 24 QVLSNMYQAKAEGADVVEIRLDC------------------INNF-Q--P---GKDLEIILTKKP-LPVLIVYRPK-WAG 77 (403)
Q Consensus 24 e~~~~~~~~~~~~~D~vElRlD~------------------l~~~-~--~---~~~l~~l~~~~~-~PiI~T~R~~-~eG 77 (403)
++..-++.+.+.|+|.|||-.-+ +... + . .+.++.+|+... -|+.+-++.. +..
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~ 241 (365)
T 2gou_A 162 DYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLN 241 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccC
Confidence 33444445567899999996532 1110 0 0 133455665442 2877766653 211
Q ss_pred CCC-CCCHHHHHHHHHHHHHcCCcEEEEecc
Q 015614 78 GLY-EGDEHKRLEALHLAEDLGADYVDFELK 107 (403)
Q Consensus 78 G~~-~~~~~~~~~ll~~~~~~g~~yvDiEl~ 107 (403)
|.. ..+.++..++.+.+.+.|++||++--.
T Consensus 242 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 242 GTVDADPILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp SCCCSSHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 211 123477888899999999999998643
No 411
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=80.03 E-value=15 Score=35.09 Aligned_cols=144 Identities=15% Similarity=0.115 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCC---CCCCchHHHH-------HHhcC-CCcEEEEeecCCCCCCCCCCHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCIN---NFQPGKDLEI-------ILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLE 89 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~---~~~~~~~l~~-------l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (403)
+.+++++.+++..+.|||+|.+--..-. ..+..+++.+ +++.. +.||- +-| .+-+
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpIS--IDT------------~~~~ 128 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLIS--VDT------------WRAQ 128 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEE--EEC------------SCHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEE--EeC------------CCHH
Confidence 4677888888888999999999765432 2222333433 33443 66653 332 2346
Q ss_pred HHHHHHHcCCcEE-EEeccccchHHHHHHhccCCCcEEEEeccCCCCC-CCH-------------------hHHHHHHHH
Q 015614 90 ALHLAEDLGADYV-DFELKVASNILGKQYSSHQSGTRFIVSCNLDCET-PSE-------------------EDLGYLVSR 148 (403)
Q Consensus 90 ll~~~~~~g~~yv-DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~t-p~~-------------------~~l~~~~~~ 148 (403)
.++++++.|++.| ||--...++.++ +.. +.+..+|+.+ + .++ |.. +++.+.+++
T Consensus 129 VaeaAl~aGa~iINDVsg~~d~~m~~-vaa--~~g~~vVlmh-~-~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~ 203 (318)
T 2vp8_A 129 VAKAACAAGADLINDTWGGVDPAMPE-VAA--EFGAGLVCAH-T-GGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAER 203 (318)
T ss_dssp HHHHHHHHTCCEEEETTSSSSTTHHH-HHH--HHTCEEEEEC-C--------------CCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEECCCCCchHHHH-HHH--HhCCCEEEEC-C-CCCCccccccccccccccccHHHHHHHHHHHHHHH
Confidence 7788999998877 554433344443 322 2467788874 3 444 432 446667888
Q ss_pred HHHcCCCEEEEEe-----ecCCHhHHHHHHHHhcc---CCCCE
Q 015614 149 MQATGADIIKLVF-----SVNDITEIARIFQLLSH---CQVPI 183 (403)
Q Consensus 149 ~~~~gadivKia~-----~~~~~~D~~~ll~~~~~---~~~p~ 183 (403)
+.+.|.+-=+|.. +..+.++++.+++-+.. .+.|+
T Consensus 204 a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~~l~~lg~Pv 246 (318)
T 2vp8_A 204 AVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPV 246 (318)
T ss_dssp HHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHHHHHTTSSCB
T ss_pred HHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHHHHHhCCCCE
Confidence 8888853113443 34577888887766543 35564
No 412
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=80.02 E-value=26 Score=33.14 Aligned_cols=126 Identities=17% Similarity=0.083 Sum_probs=66.6
Q ss_pred HHHHHhcCCCEEEEEecCCCCCCCchHHHHH---H---hcCCCcEEEEeecCCCCCCCCCCH-HHHHHHHHHHHHcCCcE
Q 015614 29 MYQAKAEGADVVEIRLDCINNFQPGKDLEII---L---TKKPLPVLIVYRPKWAGGLYEGDE-HKRLEALHLAEDLGADY 101 (403)
Q Consensus 29 ~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l---~---~~~~~PiI~T~R~~~eGG~~~~~~-~~~~~ll~~~~~~g~~y 101 (403)
++.+++.|+|+|=+=+-+=.+.+..++++.+ . +...+|+++-+-.....-.-+.++ +.-.+..+.+.++|+||
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~ 193 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADL 193 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSE
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCE
Confidence 4455678999999322111222123344433 2 346999998876543221112233 44444577888899999
Q ss_pred EEEeccc----cchHHHHHHhc-cC-CCcE-EEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015614 102 VDFELKV----ASNILGKQYSS-HQ-SGTR-FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (403)
Q Consensus 102 vDiEl~~----~~~~~~~l~~~-~~-~~~k-iI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKi 159 (403)
+=++.-. ..+.+.++... .. -... |+++ +-++.+++.+.+..+.+.|++.+=+
T Consensus 194 iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~a-----GG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 194 YKVEMPLYGKGARSDLLTASQRLNGHINMPWVILS-----SGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp EEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECC-----TTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred EEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEe-----cCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 9998842 11222233211 01 1334 5554 2334556677777777778765543
No 413
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=79.85 E-value=1.8 Score=43.33 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=32.3
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++++|+|+|-+|--++..|.+.|.+|+++.|..
T Consensus 195 ~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 195 FKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp GTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred cCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 457999999999999999999999999999988753
No 414
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=79.79 E-value=1.7 Score=40.15 Aligned_cols=35 Identities=17% Similarity=0.306 Sum_probs=31.6
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-+|--++..|.+.|.+|+++.|.+
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 46899999999999999999999999999998864
No 415
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=79.75 E-value=2.1 Score=42.92 Aligned_cols=36 Identities=25% Similarity=0.219 Sum_probs=32.1
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCC-eEEEEecCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~-~i~v~nR~~ 401 (403)
..+++++|+|+|-+|--++..+.++|+ +|+++.|..
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 468999999999999999999999999 799998864
No 416
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=79.67 E-value=1.5 Score=42.28 Aligned_cols=35 Identities=17% Similarity=0.148 Sum_probs=28.8
Q ss_pred CC-CeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AG-RMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~-~~~lilGa-GGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.| ++++|.|+ |+.+.+++..++..|++++++.++.
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~ 202 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR 202 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCc
Confidence 47 89999998 9999999988888899766665544
No 417
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=79.54 E-value=53 Score=32.77 Aligned_cols=38 Identities=13% Similarity=0.167 Sum_probs=28.8
Q ss_pred CCc-EEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeccc
Q 015614 64 PLP-VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKV 108 (403)
Q Consensus 64 ~~P-iI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiEl~~ 108 (403)
++| +++-++.. .++++-.++.+.+.+.|+|+|.+-=..
T Consensus 296 ~~P~V~vKispd-------~~~ed~~~iA~~~~~aGaDgI~v~ntt 334 (443)
T 1tv5_A 296 KKPLVFVKLAPD-------LNQEQKKEIADVLLETNIDGMIISNTT 334 (443)
T ss_dssp SCCEEEEEECSC-------CCHHHHHHHHHHHHHTTCSEEEECCCB
T ss_pred CCCeEEEEeCCC-------CCHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 578 78887753 356677888889999999999886443
No 418
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=79.54 E-value=1.7 Score=45.55 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=30.1
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..++|||+|.++.++++.|++.|.+|.|+.+..
T Consensus 47 ~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~ 79 (623)
T 3pl8_A 47 YDVVIVGSGPIGCTYARELVGAGYKVAMFDIGE 79 (623)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCcEEEEeccC
Confidence 479999999999999999999999999998753
No 419
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=79.42 E-value=2.6 Score=42.50 Aligned_cols=37 Identities=24% Similarity=0.362 Sum_probs=32.2
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCC---eEEEEecC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGA---RVVIFDID 400 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~---~i~v~nR~ 400 (403)
..++..++++.|||-||-+++.-|...|+ +|++++|.
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~ 254 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSK 254 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETT
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecc
Confidence 34566789999999999999999999998 69999874
No 420
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=79.40 E-value=1.6 Score=44.53 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=29.7
Q ss_pred CeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 369 ~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
..++|||+|.++.+++..|+++|.+|.|+.+.
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~ 64 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFV 64 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEecc
Confidence 57999999999999999999999999999873
No 421
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=79.39 E-value=2.9 Score=41.72 Aligned_cols=54 Identities=31% Similarity=0.441 Sum_probs=43.1
Q ss_pred cHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeE-EEEecC
Q 015614 338 DCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARV-VIFDID 400 (403)
Q Consensus 338 D~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i-~v~nR~ 400 (403)
-++|....++..+...+ ..+++++++|-|.|.+|..++.-|.++|++| .|.+.+
T Consensus 200 Tg~Gv~~~~~~~~~~~g---------~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~ 254 (424)
T 3k92_A 200 TAQGVTICIEEAVKKKG---------IKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDAN 254 (424)
T ss_dssp HHHHHHHHHHHHHHHTT---------CCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHcC---------CCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 35688888887766332 4578999999999999999999999999974 676654
No 422
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=79.36 E-value=8 Score=37.57 Aligned_cols=88 Identities=11% Similarity=0.133 Sum_probs=53.4
Q ss_pred cccCCHHHHHHH----HHHHHhcCCCEEEEEecC--C-----CC---C-CC-------------chHHHHHHhcC--CCc
Q 015614 17 LMAQSVEQVLSN----MYQAKAEGADVVEIRLDC--I-----NN---F-QP-------------GKDLEIILTKK--PLP 66 (403)
Q Consensus 17 l~~~~~~e~~~~----~~~~~~~~~D~vElRlD~--l-----~~---~-~~-------------~~~l~~l~~~~--~~P 66 (403)
++..++++++.+ ++.+.+.|.|.|||..-. | .+ . .+ .+.++.+|+.. +.|
T Consensus 148 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~p 227 (363)
T 3l5l_A 148 MTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLP 227 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCce
Confidence 444444444433 444567899999998742 1 11 1 11 13444555554 577
Q ss_pred EEEEeecC--CCCCCCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015614 67 VLIVYRPK--WAGGLYEGDEHKRLEALHLAEDLGADYVDFEL 106 (403)
Q Consensus 67 iI~T~R~~--~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiEl 106 (403)
|.+-++.. .+||. .+.++..++.+.+.+.|++||++-.
T Consensus 228 V~vRis~~~~~~~G~--~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 228 LTARFGVLEYDGRDE--QTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp EEEEEEEECSSSCHH--HHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEecchhcCCCCC--CCHHHHHHHHHHHHHcCCCEEEEec
Confidence 87777643 22331 2346788888999999999999864
No 423
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=79.22 E-value=2.2 Score=42.91 Aligned_cols=38 Identities=26% Similarity=0.274 Sum_probs=32.6
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHC---CCeEEEEecCCC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSR---GARVVIFDIDFG 402 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~---g~~i~v~nR~~~ 402 (403)
..++++++|.|| |+.|++++..|.+. |.+|+++.|+.+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~ 111 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAES 111 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCC
Confidence 346899999996 78899999999988 889999999753
No 424
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=79.19 E-value=1.2 Score=43.67 Aligned_cols=34 Identities=24% Similarity=0.068 Sum_probs=31.0
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+++++|+|+|-.|--++..|.+.|.+|+++.|..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~ 179 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILE 179 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 4789999999999999999999999999998764
No 425
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=79.15 E-value=1.8 Score=42.42 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=30.7
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCC-eEEEEecCC
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGA-RVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~-~i~v~nR~~ 401 (403)
++++++|.|| |+.|++++..|.+.|. +|+++.|+.
T Consensus 34 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~ 70 (399)
T 3nzo_A 34 SQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISE 70 (399)
T ss_dssp HTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCc
Confidence 4789999995 7789999999999995 999999864
No 426
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=79.03 E-value=42 Score=31.38 Aligned_cols=145 Identities=16% Similarity=0.126 Sum_probs=80.9
Q ss_pred hcCCCEEEEEecCCC-------CC---CCch---HHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHH-cCC
Q 015614 34 AEGADVVEIRLDCIN-------NF---QPGK---DLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAED-LGA 99 (403)
Q Consensus 34 ~~~~D~vElRlD~l~-------~~---~~~~---~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~-~g~ 99 (403)
+.|+|+| +-=|.+. +. +..+ ..+.+++..+.|+|+ .-. .-|.+..+.++-++--.+.++ .|+
T Consensus 52 ~aG~d~i-lvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~--pfgsy~~s~~~a~~na~rl~~eaGa 127 (281)
T 1oy0_A 52 EAGIPVL-LVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVV-ADL--PFGSYEAGPTAALAAATRFLKDGGA 127 (281)
T ss_dssp TTTCCEE-EECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEE-EEC--CTTSSTTCHHHHHHHHHHHHHTTCC
T ss_pred HcCCCEE-EECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEE-EEC--CCCcccCCHHHHHHHHHHHHHHhCC
Confidence 4699999 6556532 11 1122 344566677888887 443 234455566555554445555 899
Q ss_pred cEEEEeccc-cchHHHHHHhccCCCcEEEEe-------ccC---C---CCCCCHhHHHHHHHHHHHcCCCEEEEEeecCC
Q 015614 100 DYVDFELKV-ASNILGKQYSSHQSGTRFIVS-------CNL---D---CETPSEEDLGYLVSRMQATGADIIKLVFSVND 165 (403)
Q Consensus 100 ~yvDiEl~~-~~~~~~~l~~~~~~~~kiI~S-------~H~---f---~~tp~~~~l~~~~~~~~~~gadivKia~~~~~ 165 (403)
+.|-||-.. ..+.++.+. ..++.+++. .|. | -+|...+++.+.....++.|||.+=+=..+
T Consensus 128 ~aVklEdg~e~~~~I~al~---~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp-- 202 (281)
T 1oy0_A 128 HAVKLEGGERVAEQIACLT---AAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMVP-- 202 (281)
T ss_dssp SEEEEEBSGGGHHHHHHHH---HHTCCEEEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEEESCC--
T ss_pred eEEEECCcHHHHHHHHHHH---HCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEecCC--
Confidence 999999753 122333333 234445531 111 1 112222456666667778999988776654
Q ss_pred HhHHHHHHHHhccCCCCEEEEEcCc
Q 015614 166 ITEIARIFQLLSHCQVPIIAYSVGE 190 (403)
Q Consensus 166 ~~D~~~ll~~~~~~~~p~i~~~MG~ 190 (403)
+++. -+++....+|+|.|+-|+
T Consensus 203 -~~~a--~~it~~l~iP~igIGaG~ 224 (281)
T 1oy0_A 203 -AELA--TQITGKLTIPTVGIGAGP 224 (281)
T ss_dssp -HHHH--HHHHHHCSSCEEEESSCS
T ss_pred -HHHH--HHHHHhCCCCEEEeCCCC
Confidence 2332 244555679999887765
No 427
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=78.95 E-value=5.3 Score=41.97 Aligned_cols=79 Identities=13% Similarity=0.037 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhcCCCEEEEEecC------------------CCCC-CC-----chHHHHHHhcC--CCcEEEEeecCC-
Q 015614 23 EQVLSNMYQAKAEGADVVEIRLDC------------------INNF-QP-----GKDLEIILTKK--PLPVLIVYRPKW- 75 (403)
Q Consensus 23 ~e~~~~~~~~~~~~~D~vElRlD~------------------l~~~-~~-----~~~l~~l~~~~--~~PiI~T~R~~~- 75 (403)
+++...++.+.+.|.|.||+-.-+ +... +. .+.++.+|+.. +.|+.+-++...
T Consensus 141 ~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~ 220 (671)
T 1ps9_A 141 DNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDL 220 (671)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECcccc
Confidence 344444556677899999996532 1110 00 13444556554 677777777532
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHcCCcEEEE
Q 015614 76 -AGGLYEGDEHKRLEALHLAEDLGADYVDF 104 (403)
Q Consensus 76 -eGG~~~~~~~~~~~ll~~~~~~g~~yvDi 104 (403)
+||. +.++..++.+.+.+.|++||++
T Consensus 221 ~~~g~---~~~~~~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 221 VEDGG---TFAETVELAQAIEAAGATIINT 247 (671)
T ss_dssp STTCC---CHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCC---CHHHHHHHHHHHHhcCCCEEEc
Confidence 3443 4567788888888999999998
No 428
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=78.92 E-value=15 Score=33.60 Aligned_cols=103 Identities=12% Similarity=0.130 Sum_probs=67.9
Q ss_pred cCCCCCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCH
Q 015614 5 NITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDE 84 (403)
Q Consensus 5 ~~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~ 84 (403)
-|++.++.+|+.+-.++.++++..++.. ...++++++-++++....+ +.+..|++ .+.++++=+... +...
T Consensus 3 ~m~~k~~~LivALD~~~~~~al~l~~~~-~~~v~~~Kvg~~lf~~~G~-~~v~~L~~-~g~~iflDlK~~------DI~n 73 (239)
T 3tr2_A 3 AMEKPDPKVIVAIDAGTVEQARAQINPL-TPELCHLKIGSILFTRYGP-AFVEELMQ-KGYRIFLDLKFY------DIPQ 73 (239)
T ss_dssp -----CCCEEEECCCSSHHHHHHHHTTC-CTTTCEEEEEHHHHHHHHH-HHHHHHHH-TTCCEEEEEEEC------SCHH
T ss_pred hHhhCCCCeEEEeCCCCHHHHHHHHHHh-CCcccEEEeCHHHHHhhCH-HHHHHHHh-cCCCEEEEeccc------ccch
Confidence 3677788999999999999999877764 4458899999999864322 34556654 477888776642 2222
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccccchHHHHHH
Q 015614 85 HKRLEALHLAEDLGADYVDFELKVASNILGKQY 117 (403)
Q Consensus 85 ~~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~ 117 (403)
-. ....+.+.++|+|++-+--....+.++..+
T Consensus 74 Tv-~~~~~~~~~~gad~vTvh~~~G~~~~~~a~ 105 (239)
T 3tr2_A 74 TV-AGACRAVAELGVWMMNIHISGGRTMMETVV 105 (239)
T ss_dssp HH-HHHHHHHHHTTCSEEEEEGGGCHHHHHHHH
T ss_pred HH-HHHHHHHHhCCCCEEEEeccCCHHHHHHHH
Confidence 11 113457789999999997766555554443
No 429
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=78.80 E-value=2.4 Score=41.55 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=31.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-.|--++..|.+.|.+|+++.|..
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 178 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP 178 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 36899999999999999999999999999998864
No 430
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=78.69 E-value=2.2 Score=39.40 Aligned_cols=35 Identities=11% Similarity=0.074 Sum_probs=31.6
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-.|--++..|.+.|.+|+++.|..
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 46899999999999999999999999999998864
No 431
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=78.64 E-value=43 Score=32.26 Aligned_cols=157 Identities=12% Similarity=0.117 Sum_probs=96.1
Q ss_pred ecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCC-CchHHHHHHhcC--CCcEEEEeecCCCCCCCCCCHHHHHHHHH
Q 015614 16 PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQ-PGKDLEIILTKK--PLPVLIVYRPKWAGGLYEGDEHKRLEALH 92 (403)
Q Consensus 16 ~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~-~~~~l~~l~~~~--~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 92 (403)
++...+.+++...+.++.+.|.|.+++.+-. +.+ ..+.++.+|+.. +.|+.+-. .|| | +.++-.++++
T Consensus 140 ~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~--~~~~~~e~v~avr~a~g~d~~l~vDa----n~~-~--~~~~a~~~~~ 210 (379)
T 2rdx_A 140 VAPQRSEAETRAELARHRAAGYRQFQIKVGA--DWQSDIDRIRACLPLLEPGEKAMADA----NQG-W--RVDNAIRLAR 210 (379)
T ss_dssp ECCCSCSHHHHHHHHHHHHTTCCEEEEECCS--CHHHHHHHHHHHGGGSCTTCEEEEEC----TTC-S--CHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHHHHHcCCCEEEEeccC--CHHHHHHHHHHHHHhcCCCCEEEEEC----CCC-C--CHHHHHHHHH
Confidence 3333678889888888888999999998753 111 124556666655 56765533 233 3 4566677888
Q ss_pred HHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeec-CCHhHHHH
Q 015614 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSV-NDITEIAR 171 (403)
Q Consensus 93 ~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~-~~~~D~~~ 171 (403)
.+-++++ |+.=-+. .-+..+++.. .-.+.|++.=.. -+.+++.+.++ .-.+|++-+=.+- -......+
T Consensus 211 ~l~~~~i-~iE~P~~-~~~~~~~l~~--~~~iPI~~de~i----~~~~~~~~~i~---~~~~d~v~ik~~~~GGit~~~~ 279 (379)
T 2rdx_A 211 ATRDLDY-ILEQPCR-SYEECQQVRR--VADQPMKLDECV----TGLHMAQRIVA---DRGAEICCLKISNLGGLSKARR 279 (379)
T ss_dssp HTTTSCC-EEECCSS-SHHHHHHHHT--TCCSCEEECTTC----CSHHHHHHHHH---HTCCSEEEEETTTTTSHHHHHH
T ss_pred HHHhCCe-EEeCCcC-CHHHHHHHHh--hCCCCEEEeCCc----CCHHHHHHHHH---cCCCCEEEEeccccCCHHHHHH
Confidence 8778889 8642232 1223334432 235566654321 12334444443 3347988775544 46899999
Q ss_pred HHHHhccCCCCEEEEEcCccc
Q 015614 172 IFQLLSHCQVPIIAYSVGERG 192 (403)
Q Consensus 172 ll~~~~~~~~p~i~~~MG~~G 192 (403)
+.++....+.++..=||.+.+
T Consensus 280 i~~~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 280 TRDFLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp HHHHHHHTTCCEEEECSBCSH
T ss_pred HHHHHHHcCCeEEEeeccCcH
Confidence 999988888887665676654
No 432
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=78.53 E-value=1.9 Score=40.34 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=31.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-+|--++..|.+.|.+|+++.|+.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 47899999999999999999999999999998864
No 433
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=78.46 E-value=5.2 Score=39.81 Aligned_cols=91 Identities=13% Similarity=0.172 Sum_probs=53.6
Q ss_pred EEecccCCHHHHHHH----HHHHHhcCCCEEEEEecC-------CC---CC-C------C--------chHHHHHHhcC-
Q 015614 14 CAPLMAQSVEQVLSN----MYQAKAEGADVVEIRLDC-------IN---NF-Q------P--------GKDLEIILTKK- 63 (403)
Q Consensus 14 cv~l~~~~~~e~~~~----~~~~~~~~~D~vElRlD~-------l~---~~-~------~--------~~~l~~l~~~~- 63 (403)
.-.++..++++++.+ +..+.+.|.|.|||-.-. |. +. + . .+.+..+|+..
T Consensus 157 pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~ 236 (419)
T 3l5a_A 157 VIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVID 236 (419)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHh
Confidence 345555566555444 344567899999997653 11 11 1 1 12334444433
Q ss_pred ---CCcEEEEeecCC----CC--CCCCCCHHHHHHHHHHHHH-cCCcEEEEecc
Q 015614 64 ---PLPVLIVYRPKW----AG--GLYEGDEHKRLEALHLAED-LGADYVDFELK 107 (403)
Q Consensus 64 ---~~PiI~T~R~~~----eG--G~~~~~~~~~~~ll~~~~~-~g~~yvDiEl~ 107 (403)
.-.+++++|-.. +| |. +.++..++.+.+.+ .|++||+|-..
T Consensus 237 ~~~~~~f~v~vRis~~~~~~~~~G~---~~ed~~~la~~L~~~~Gvd~I~vs~g 287 (419)
T 3l5a_A 237 KEAPDNFILGFRATPEETRGSDLGY---TIDEFNQLIDWVMDVSNIQYLAIASW 287 (419)
T ss_dssp HHCCTTCEEEEEECSCEEETTEEEE---CHHHHHHHHHHHHHHSCCCCEEECCT
T ss_pred hhcCCCeeEEEecccccccCCCCCC---CHHHHHHHHHHHHhhcCCcEEEEeeC
Confidence 334555666332 22 32 46778889999999 89999998654
No 434
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=78.35 E-value=12 Score=36.46 Aligned_cols=90 Identities=18% Similarity=0.154 Sum_probs=52.7
Q ss_pred cccCCHHHHH----HHHHHHHhcCCCEEEEEecC-------CCC----CCC-------------chHHHHHHhcCC-CcE
Q 015614 17 LMAQSVEQVL----SNMYQAKAEGADVVEIRLDC-------INN----FQP-------------GKDLEIILTKKP-LPV 67 (403)
Q Consensus 17 l~~~~~~e~~----~~~~~~~~~~~D~vElRlD~-------l~~----~~~-------------~~~l~~l~~~~~-~Pi 67 (403)
++..++++.. ..++.+.+.|.|.|||-.-+ |.+ ..+ .+.++.+|+... -|+
T Consensus 156 mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v 235 (377)
T 2r14_A 156 LETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERV 235 (377)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcE
Confidence 4444554443 33445567899999997632 111 111 133455555442 288
Q ss_pred EEEeecCC-CCCCC-CCCHHHHHHHHHHHHHcCCcEEEEec
Q 015614 68 LIVYRPKW-AGGLY-EGDEHKRLEALHLAEDLGADYVDFEL 106 (403)
Q Consensus 68 I~T~R~~~-eGG~~-~~~~~~~~~ll~~~~~~g~~yvDiEl 106 (403)
.+-++... ..|.. ..+.++..++.+.+.+.|++||++-.
T Consensus 236 ~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 236 GIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp EEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 77777542 22211 12347788889999999999999854
No 435
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=78.01 E-value=2.6 Score=41.72 Aligned_cols=35 Identities=26% Similarity=0.232 Sum_probs=31.6
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-+|-.++..|.+.|.+|+++.|..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc
Confidence 36899999999999999999999999999998863
No 436
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=77.81 E-value=2.1 Score=41.51 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=28.5
Q ss_pred CCCeEEEEc-chhHHHHHHHHHHHCCCeEEEEec
Q 015614 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDI 399 (403)
Q Consensus 367 ~~~~~lilG-aGGaarai~~al~~~g~~i~v~nR 399 (403)
.|++++|.| +||.+.+++..++..|++|+.+.+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~ 216 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS 216 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 578999999 699999999988899998776654
No 437
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=77.79 E-value=2.6 Score=41.79 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=31.2
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.++++|+|+|-.|--++..|.++|.+|+++.|..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 203 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG 203 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 5899999999999999999999999999998863
No 438
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=77.77 E-value=2.1 Score=40.28 Aligned_cols=35 Identities=11% Similarity=0.009 Sum_probs=31.7
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|..|--++..|.+.|.+|+++.|..
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 47899999999999999999999999999998864
No 439
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=77.61 E-value=2 Score=41.64 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=31.0
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+++++|+|+|-+|--++..|.++|.+|+++.|..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 4789999999999999999999999999998864
No 440
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=77.55 E-value=2.9 Score=42.04 Aligned_cols=35 Identities=29% Similarity=0.344 Sum_probs=31.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-.|--++..|.++|.+|+++.|..
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 46899999999999999999999999999998864
No 441
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=77.54 E-value=2 Score=42.90 Aligned_cols=35 Identities=23% Similarity=0.346 Sum_probs=31.7
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-+|-.++..|.++|.+|+|+.|..
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 204 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE 204 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 36899999999999999999999999999998864
No 442
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=77.46 E-value=4.1 Score=40.95 Aligned_cols=52 Identities=23% Similarity=0.282 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeE-EEEec
Q 015614 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARV-VIFDI 399 (403)
Q Consensus 339 ~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i-~v~nR 399 (403)
+.|...++++.+.+.+ .++++++++|-|.|.+|..++.-|.++|++| .|.+.
T Consensus 210 g~Gv~~~~~~~~~~~G---------~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~ 262 (449)
T 1bgv_A 210 GYGSVYYVEAVMKHEN---------DTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGP 262 (449)
T ss_dssp HHHHHHHHHHHHHHTT---------CCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred hHHHHHHHHHHHHHcc---------CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeC
Confidence 5688888888776433 4678999999999999999999999999965 45654
No 443
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=77.42 E-value=1.8 Score=40.48 Aligned_cols=35 Identities=14% Similarity=0.304 Sum_probs=31.7
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-.|--++..|.+.|.+|+++.|..
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 57899999999999999999999999999999864
No 444
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=77.31 E-value=43 Score=31.32 Aligned_cols=137 Identities=15% Similarity=0.183 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCC----CC---chHHHHHHhcC-CCcEEEEeecCCCCCCCCCCHHHHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNF----QP---GKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLEALH 92 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~----~~---~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 92 (403)
|.+|+..+..++.+.||.++=+-+-- .+- ++ .+.+..+|+.. ++.|=+|- ||....+.++|.+.+
T Consensus 32 TpeEia~~A~~a~~AGAaivHlHvRd-~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TT-----g~~~~~~~eeR~~~~- 104 (282)
T 2y7e_A 32 TPEEQAKEAKACFEAGARVIHLHIRE-DDGRPSQRLDRFQEAISAIREVVPEIIIQIST-----GGAVGESFDKRLAPL- 104 (282)
T ss_dssp SHHHHHHHHHHHHHHTEEEEEECEEC-TTSCEECCHHHHHHHHHHHHHHCTTSEEEECS-----SCSTTCCHHHHHGGG-
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecC-CCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCC-----CCCCCCCHHHHHHHh-
Confidence 56888888888889999999987765 321 11 24556677653 55554553 444334678888766
Q ss_pred HHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHhHHHHH
Q 015614 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARI 172 (403)
Q Consensus 93 ~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~D~~~l 172 (403)
++.+|+.-++..... . + . ..|.++| +.+.+++..|.+.| +|.=...-+..++..+
T Consensus 105 ---~~~Pe~asl~~gs~N--------f--~-~------~v~~n~~--~~~~~~~~~~~e~G---v~pE~e~fd~g~l~~~ 159 (282)
T 2y7e_A 105 ---ALKPEMATLNAGTLN--------F--G-D------DIFINHP--ADIIRLAEAFKQYN---VVPEVEVYESGMVDAV 159 (282)
T ss_dssp ---GGCCSEEEEECCCEE--------E--T-T------EEECCCH--HHHHHHHHHHHHTT---CEEEEEECSHHHHHHH
T ss_pred ---hcCCCEEEecccccc--------c--c-c------ccccCCH--HHHHHHHHHHHHcC---CeEEEEEECHHHHHHH
Confidence 257888887765422 0 0 0 1133444 67999999999999 4766666788888888
Q ss_pred HHHhcc----CCCCEEEEEcC
Q 015614 173 FQLLSH----CQVPIIAYSVG 189 (403)
Q Consensus 173 l~~~~~----~~~p~i~~~MG 189 (403)
.++..+ ...+.+-+.||
T Consensus 160 ~~l~~~Gl~p~~p~~~~~VlG 180 (282)
T 2y7e_A 160 ARLIKKGIITQNPLHIQFVLG 180 (282)
T ss_dssp HHHHHTTSCCCSSCEEEEEEC
T ss_pred HHHHHcCCCCCCCeEEEEEEe
Confidence 877543 23456677776
No 445
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=77.30 E-value=1.8 Score=47.82 Aligned_cols=34 Identities=38% Similarity=0.438 Sum_probs=30.7
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+.++|||+|.++.+++..|.+.|.+|+|+.+..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~ 161 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERA 161 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 3579999999999999999999999999998753
No 446
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=77.10 E-value=2.5 Score=42.15 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=31.4
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+++++|+|+|-.|--++..|.++|.+|+++.|..
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 216 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP 216 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 5899999999999999999999999999998864
No 447
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=76.96 E-value=3.1 Score=41.90 Aligned_cols=53 Identities=19% Similarity=0.258 Sum_probs=42.7
Q ss_pred cHHHHHHHHHHHHHhcCcCCCCCcCCCCCCCCeEEEEcchhHHHHHHHHHHHCCCeE-EEEec
Q 015614 338 DCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARV-VIFDI 399 (403)
Q Consensus 338 D~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lilGaGGaarai~~al~~~g~~i-~v~nR 399 (403)
-+.|....++..+... +..++|++++|-|.|-+|..++.-|.++|++| .|.+.
T Consensus 218 Tg~Gv~~~~~~~~~~~---------g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~ 271 (456)
T 3r3j_A 218 TGYGVVYFAENVLKDL---------NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDS 271 (456)
T ss_dssp HHHHHHHHHHHHHHTT---------TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECS
T ss_pred cchHHHHHHHHHHHHc---------CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3678888888877632 25678999999999999999999999999965 46654
No 448
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=76.95 E-value=32 Score=33.40 Aligned_cols=85 Identities=16% Similarity=0.186 Sum_probs=55.8
Q ss_pred EEEecccC-----CHHHHHHHHHHHHhcCCCEEEEEecCCCCC-----CCchHHH----HHHhc-------CCCcEEEEe
Q 015614 13 ICAPLMAQ-----SVEQVLSNMYQAKAEGADVVEIRLDCINNF-----QPGKDLE----IILTK-------KPLPVLIVY 71 (403)
Q Consensus 13 icv~l~~~-----~~~e~~~~~~~~~~~~~D~vElRlD~l~~~-----~~~~~l~----~l~~~-------~~~PiI~T~ 71 (403)
+.+.|.+. +.+|...-++.+ ...+|+||+=+=+=... ...+.+. .+++. .++|+++-+
T Consensus 149 v~vniggn~~t~~~~~dy~~~~~~~-~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi 227 (367)
T 3zwt_A 149 LGVNLGKNKTSVDAAEDYAEGVRVL-GPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKI 227 (367)
T ss_dssp EEEEECCCTTCSCHHHHHHHHHHHH-GGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEE
T ss_pred EEEEEecCCCCCcCHHHHHHHHHHH-hhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEe
Confidence 56888663 577777666665 44689999977542211 1112232 23221 578999999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015614 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (403)
Q Consensus 72 R~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiE 105 (403)
|.. .++++-.++.+.+.+.|+|.|-+-
T Consensus 228 ~p~-------~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 228 APD-------LTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp CSC-------CCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCC-------CCHHHHHHHHHHHHHcCCCEEEEe
Confidence 853 356677888888999999998864
No 449
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=76.79 E-value=35 Score=32.33 Aligned_cols=148 Identities=12% Similarity=0.147 Sum_probs=85.3
Q ss_pred CeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCc---hHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHH
Q 015614 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK 86 (403)
Q Consensus 10 ~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~ 86 (403)
.|.|..|..+-+-.++...+.++ -+..++..+ ..++. +.+..+++.++.|+.+.+=.. +.+
T Consensus 27 ~Pii~apM~gvs~~~la~av~~a--GglG~i~~~-----~~~~~~l~~~i~~i~~~~~~p~gVnl~~~------~~~--- 90 (326)
T 3bo9_A 27 HPILMGGMAWAGTPTLAAAVSEA--GGLGIIGSG-----AMKPDDLRKAISELRQKTDKPFGVNIILV------SPW--- 90 (326)
T ss_dssp SSEEECCCTTTSCHHHHHHHHHT--TSBEEEECT-----TCCHHHHHHHHHHHHTTCSSCEEEEEETT------STT---
T ss_pred CCEEECCCCCCCCHHHHHHHHhC--CCcEEeCCC-----CCCHHHHHHHHHHHHHhcCCCEEEEEecc------CCC---
Confidence 47888888877666666555432 233566432 12221 234455555667887665421 112
Q ss_pred HHHHHHHHHHcCCcEEEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEee----
Q 015614 87 RLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---- 162 (403)
Q Consensus 87 ~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~---- 162 (403)
..+.++.+.+.|+++|.+-...+.+..+.+. ..+.+++.+.++ .++ ..++.+.|+|.+.+-..
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~---~~g~~v~~~v~s------~~~----a~~a~~~GaD~i~v~g~~~GG 157 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAGNPTKYIRELK---ENGTKVIPVVAS------DSL----ARMVERAGADAVIAEGMESGG 157 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCCHHHHHHHH---HTTCEEEEEESS------HHH----HHHHHHTTCSCEEEECTTSSE
T ss_pred HHHHHHHHHHCCCCEEEECCCCcHHHHHHHH---HcCCcEEEEcCC------HHH----HHHHHHcCCCEEEEECCCCCc
Confidence 3445667778899999998777766666554 347889887653 233 34566789999888431
Q ss_pred c-CCHhHHHHHHHHhccCCCCEEEE
Q 015614 163 V-NDITEIARIFQLLSHCQVPIIAY 186 (403)
Q Consensus 163 ~-~~~~D~~~ll~~~~~~~~p~i~~ 186 (403)
. ....+...+-++....+.|+|+-
T Consensus 158 ~~G~~~~~~ll~~i~~~~~iPviaa 182 (326)
T 3bo9_A 158 HIGEVTTFVLVNKVSRSVNIPVIAA 182 (326)
T ss_dssp ECCSSCHHHHHHHHHHHCSSCEEEE
T ss_pred cCCCccHHHHHHHHHHHcCCCEEEE
Confidence 1 11223333333333457888654
No 450
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=76.75 E-value=2.4 Score=40.86 Aligned_cols=38 Identities=21% Similarity=0.301 Sum_probs=34.0
Q ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 364 ~~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+.|+++.|+|.|..|++++..+...|++|..++|..
T Consensus 137 ~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~ 174 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVK 174 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ceecCcEEEEECcchHHHHHHHhhcccCceeeecCCcc
Confidence 34678999999999999999999999999999998864
No 451
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=76.68 E-value=2.4 Score=39.60 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=31.5
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-.|--++..|.+.|.+|+++.|..
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 46899999999999999999999999999998864
No 452
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=76.61 E-value=49 Score=31.68 Aligned_cols=82 Identities=21% Similarity=0.218 Sum_probs=48.6
Q ss_pred HHHHHhcCCCEEEEEecCCCCCCC---chHHHHHHh------cCCCcEEEEe--ecCCCCCCCCC-----CHHHHHHHHH
Q 015614 29 MYQAKAEGADVVEIRLDCINNFQP---GKDLEIILT------KKPLPVLIVY--RPKWAGGLYEG-----DEHKRLEALH 92 (403)
Q Consensus 29 ~~~~~~~~~D~vElRlD~l~~~~~---~~~l~~l~~------~~~~PiI~T~--R~~~eGG~~~~-----~~~~~~~ll~ 92 (403)
.+++++.|||+|=+-+=+=.+.++ .++++.+.+ ..++|+++-+ |.+..++..+. .++.-....+
T Consensus 116 ve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R 195 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMK 195 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHH
Confidence 445567899999987765333222 134444432 3499999855 55432232210 1222445556
Q ss_pred HH--HHcCCcEEEEeccccc
Q 015614 93 LA--EDLGADYVDFELKVAS 110 (403)
Q Consensus 93 ~~--~~~g~~yvDiEl~~~~ 110 (403)
.+ .++|+|++=+|+.-+.
T Consensus 196 ~~~~~elGaDv~Kve~p~~~ 215 (332)
T 3iv3_A 196 VFSAERFGIDVLKVEVPVNM 215 (332)
T ss_dssp HHTSGGGCCSEEEECCSSCG
T ss_pred HHhhcCcCCcEEEEecCCCh
Confidence 66 5779999999987654
No 453
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=76.60 E-value=1.9 Score=42.77 Aligned_cols=36 Identities=8% Similarity=0.091 Sum_probs=32.6
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCe-EEEEecCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~-i~v~nR~~ 401 (403)
+.+++++|+|+|-+|--++..|.+.|.+ |+++.|+.
T Consensus 210 ~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 210 FVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp GTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred cCCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 4689999999999999999999999997 99998864
No 454
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=76.47 E-value=2.4 Score=39.49 Aligned_cols=36 Identities=14% Similarity=0.155 Sum_probs=32.3
Q ss_pred CCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 366 ~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
..+++++|+|+|-.|.-++..|.+.|.+|+++.|..
T Consensus 171 ~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~ 206 (338)
T 3itj_A 171 FRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD 206 (338)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 357899999999999999999999999999998864
No 455
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=76.39 E-value=3.2 Score=40.11 Aligned_cols=34 Identities=26% Similarity=0.207 Sum_probs=31.2
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+++++|+|+|-.+-.++..|.++|.+|+++.|..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE 178 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc
Confidence 5899999999999999999999999999998853
No 456
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=76.38 E-value=2.1 Score=44.70 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=31.3
Q ss_pred CCCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEecC
Q 015614 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 365 ~~~~~~~lilGa-GGaarai~~al~~~g~~i~v~nR~ 400 (403)
.+++|.++|-|+ +|.+++++..|++.|++|++.+|.
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~ 355 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK 355 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc
Confidence 467899999985 789999999999999999988763
No 457
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=76.33 E-value=49 Score=30.66 Aligned_cols=146 Identities=16% Similarity=0.125 Sum_probs=83.4
Q ss_pred hcCCCEEEEEecCCC----C-CCC-----ch---HHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 015614 34 AEGADVVEIRLDCIN----N-FQP-----GK---DLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGAD 100 (403)
Q Consensus 34 ~~~~D~vElRlD~l~----~-~~~-----~~---~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~ 100 (403)
+.|+|++=+ =|.+. . .+. .+ ..+.+++..+.|+|+ .-. .-|.+. +.++-++-..+.++.|++
T Consensus 35 ~aG~d~ilv-Gdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vv-aD~--pfgsy~-~~~~a~~~a~rl~kaGa~ 109 (264)
T 1m3u_A 35 DEGLNVMLV-GDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLL-ADL--PFMAYA-TPEQAFENAATVMRAGAN 109 (264)
T ss_dssp HHTCCEEEE-CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEE-EEC--CTTSSS-SHHHHHHHHHHHHHTTCS
T ss_pred HcCCCEEEE-CHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEE-EEC--CCCCcC-CHHHHHHHHHHHHHcCCC
Confidence 469999944 66542 1 111 22 233455667888776 332 334455 777666666778888999
Q ss_pred EEEEeccccchHHHHHHhccCCCcEEEEec-------c---CCC---CCCC-HhHHHHHHHHHHHcCCCEEEEEeecCCH
Q 015614 101 YVDFELKVASNILGKQYSSHQSGTRFIVSC-------N---LDC---ETPS-EEDLGYLVSRMQATGADIIKLVFSVNDI 166 (403)
Q Consensus 101 yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~-------H---~f~---~tp~-~~~l~~~~~~~~~~gadivKia~~~~~~ 166 (403)
.|=||-.. +....+......++.+++.. | .|. +|.. .+++.+.....++.|||.+=+=..+
T Consensus 110 aVklEgg~--e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~vp--- 184 (264)
T 1m3u_A 110 MVKIEGGE--WLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECVP--- 184 (264)
T ss_dssp EEECCCSG--GGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEESCC---
T ss_pred EEEECCcH--HHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEecCC---
Confidence 99999752 22223332223455565321 1 121 2211 2446666666778999987766554
Q ss_pred hHHHHHHHHhccCCCCEEEEEcCcc
Q 015614 167 TEIARIFQLLSHCQVPIIAYSVGER 191 (403)
Q Consensus 167 ~D~~~ll~~~~~~~~p~i~~~MG~~ 191 (403)
+++. -+++...++|+|.|+-|+.
T Consensus 185 ~~~a--~~it~~l~iP~igIGag~~ 207 (264)
T 1m3u_A 185 VELA--KRITEALAIPVIGIGAGNV 207 (264)
T ss_dssp HHHH--HHHHHHCSSCEEEESSCTT
T ss_pred HHHH--HHHHHhCCCCEEEeCCCCC
Confidence 2332 2445556799998877753
No 458
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=76.30 E-value=48 Score=31.39 Aligned_cols=114 Identities=15% Similarity=0.111 Sum_probs=72.8
Q ss_pred HHHHHHHHHHhcCCCEEEEEecCCCCC----CCc---hHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHH
Q 015614 24 QVLSNMYQAKAEGADVVEIRLDCINNF----QPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAED 96 (403)
Q Consensus 24 e~~~~~~~~~~~~~D~vElRlD~l~~~----~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~ 96 (403)
+.+....+..+.|||+|-+....-.+- +.. +.++.+++..+.|+.+- - .+.++.+-+.++++++
T Consensus 75 ~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~-D--------T~~~~~~~~V~eaal~ 145 (310)
T 2h9a_B 75 DPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMII-G--------CGVEEKDAEIFPVIGE 145 (310)
T ss_dssp CHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEE-C--------CSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEE-C--------CCCCCCCHHHHHHHHH
Confidence 344444555689999999999754321 111 23445666678898751 1 1356788899999999
Q ss_pred cCCc---E-EEEeccccchHHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCC
Q 015614 97 LGAD---Y-VDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA 154 (403)
Q Consensus 97 ~g~~---y-vDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~ga 154 (403)
.|++ . =|+.....++..+ +. .+.+..+|+.+-. +.+.+.++++.+.+.|.
T Consensus 146 aga~~k~iINdvs~~~~~~~~~-~a--a~~g~~vv~m~~~-----dv~~l~~~~~~a~~~Gi 199 (310)
T 2h9a_B 146 ALSGRNCLLSSATKDNYKPIVA-TC--MVHGHSVVASAPL-----DINLSKQLNIMIMEMNL 199 (310)
T ss_dssp HTTTSCCEEEEECTTTHHHHHH-HH--HHHTCEEEEECSS-----CHHHHHHHHHHHHTTTC
T ss_pred hCCCCCCEEEECCCCccHHHHH-HH--HHhCCCEEEEChh-----HHHHHHHHHHHHHHCCC
Confidence 9986 4 4776654333332 22 2346677776421 35678888888888885
No 459
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=76.24 E-value=1.1e+02 Score=34.51 Aligned_cols=155 Identities=12% Similarity=0.051 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHhcCCCE--EEE----Eec----CCCCCCCchHHHHHHhcC-CCcEEEEeecCCCCCCCCCCHHHHHHH
Q 015614 22 VEQVLSNMYQAKAEGADV--VEI----RLD----CINNFQPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLEA 90 (403)
Q Consensus 22 ~~e~~~~~~~~~~~~~D~--vEl----RlD----~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~l 90 (403)
.++.+.-++...+.|+|+ ||. ..| ++. .++.+.+..+++.. +.++-.-+|..+-=|.....+....+.
T Consensus 572 ~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~-~~p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~~~ 650 (1165)
T 2qf7_A 572 TYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLT-EDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVKYF 650 (1165)
T ss_dssp HHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHC-CCHHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcC-CCHHHHHHHHHHHchhhHHHHHhccccccccccCCchhHHHH
Confidence 455555555555566676 886 344 122 24456677777655 344444456544345545566666678
Q ss_pred HHHHHHcCCcEEEEeccccc--hHHHHHHhccCCCcEE--EEec--cCCCCCC---CHhHHHHHHHHHHHcCCCEEEEEe
Q 015614 91 LHLAEDLGADYVDFELKVAS--NILGKQYSSHQSGTRF--IVSC--NLDCETP---SEEDLGYLVSRMQATGADIIKLVF 161 (403)
Q Consensus 91 l~~~~~~g~~yvDiEl~~~~--~~~~~l~~~~~~~~ki--I~S~--H~f~~tp---~~~~l~~~~~~~~~~gadivKia~ 161 (403)
++++++.|++.+-|=..... .+...+...+..+..+ -+|| |.++.+- +.+.+.++.+++.+.|||.+-|+=
T Consensus 651 i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~D 730 (1165)
T 2qf7_A 651 VRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKD 730 (1165)
T ss_dssp HHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 99999999998887332221 2222221222223333 3444 3222111 456799999999999999999887
Q ss_pred ecC--CHhHHHHHHHHhc
Q 015614 162 SVN--DITEIARIFQLLS 177 (403)
Q Consensus 162 ~~~--~~~D~~~ll~~~~ 177 (403)
|.- ++.++.++.+.+.
T Consensus 731 T~G~~~P~~~~~lv~~l~ 748 (1165)
T 2qf7_A 731 MAGLLKPAAAKVLFKALR 748 (1165)
T ss_dssp TTCCCCHHHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHH
Confidence 664 5778877776653
No 460
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=76.17 E-value=2.8 Score=42.73 Aligned_cols=36 Identities=22% Similarity=0.128 Sum_probs=31.9
Q ss_pred CCC-CeEEEEcchhHHHHHHHHHHHC------CCeEEEEecCC
Q 015614 366 LAG-RMFVLAGAGGAGRALAFGAKSR------GARVVIFDIDF 401 (403)
Q Consensus 366 ~~~-~~~lilGaGGaarai~~al~~~------g~~i~v~nR~~ 401 (403)
++| +++.|||.|-.|.|++..|.+. |.+|++.+|+.
T Consensus 51 L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~ 93 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKG 93 (525)
T ss_dssp TTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTT
T ss_pred hcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCc
Confidence 567 8999999999999999999988 88888888764
No 461
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=76.15 E-value=2.8 Score=41.83 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=31.2
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.++++|+|+|-+|-.++..|.++|.+|+|+.|..
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP 202 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 5899999999999999999999999999998864
No 462
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=76.09 E-value=3.4 Score=40.85 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=31.9
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-.|--++..|.++|.+|+++.|..
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE 181 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 57899999999999999999999999999998863
No 463
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=76.06 E-value=1.3 Score=44.32 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=30.5
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
-.++.|+|+|-+|.+++..|++ |.+|++++|+++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 3589999999999999999998 999999999864
No 464
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=75.96 E-value=2.5 Score=39.18 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=31.6
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-+|--++..|.+.|.+|+++.|..
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 46899999999999999999999999999998864
No 465
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=75.92 E-value=1.5 Score=41.96 Aligned_cols=35 Identities=23% Similarity=0.206 Sum_probs=29.0
Q ss_pred CeEEEE-cchhHHHHHHHHHHHCCCeEEEEecCCCC
Q 015614 369 RMFVLA-GAGGAGRALAFGAKSRGARVVIFDIDFGT 403 (403)
Q Consensus 369 ~~~lil-GaGGaarai~~al~~~g~~i~v~nR~~~k 403 (403)
++++|. |+||.+.+++..++..|++|+++.|+.+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~ 201 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQ 201 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGG
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 566666 78999999999899999999888887543
No 466
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=75.88 E-value=2.9 Score=41.48 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=31.1
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+++++|+|+|-+|-.++..|.+.|.+|+++.|..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~ 200 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD 200 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 5899999999999999999999999999998763
No 467
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=75.84 E-value=2.2 Score=41.02 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=26.3
Q ss_pred CCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEe
Q 015614 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFD 398 (403)
Q Consensus 367 ~~~~~lilGa-GGaarai~~al~~~g~~i~v~n 398 (403)
.|++++|+|+ |+.+.+++..++..|++++++.
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~ 199 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVV 199 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEe
Confidence 5789999997 9999999988888899554443
No 468
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=75.80 E-value=1.4 Score=48.84 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=30.5
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCC------eEEEEecC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGA------RVVIFDID 400 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~------~i~v~nR~ 400 (403)
++.+|+|+|+||.|..++..|+..|+ +|+|++.+
T Consensus 424 ~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D 463 (1015)
T 3cmm_A 424 ANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDND 463 (1015)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCC
T ss_pred hcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCC
Confidence 46799999999999999999999987 79998865
No 469
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=75.57 E-value=1 Score=43.90 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=29.9
Q ss_pred CCeEEEE--cchhHHHHHHHHHHHCCCeEEEEecCCC
Q 015614 368 GRMFVLA--GAGGAGRALAFGAKSRGARVVIFDIDFG 402 (403)
Q Consensus 368 ~~~~lil--GaGGaarai~~al~~~g~~i~v~nR~~~ 402 (403)
+.+++|+ |+|+.+.+++..++..|++|+.+.++.+
T Consensus 171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~ 207 (379)
T 3iup_A 171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQE 207 (379)
T ss_dssp TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 6789999 7899999999988889999888877643
No 470
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=75.44 E-value=16 Score=35.51 Aligned_cols=137 Identities=15% Similarity=0.074 Sum_probs=71.4
Q ss_pred ecccCCHHHHHHH----HHHHHhcCCCEEEEEecC-------CCC---C-CC-------------chHHHHHHhcCC-Cc
Q 015614 16 PLMAQSVEQVLSN----MYQAKAEGADVVEIRLDC-------INN---F-QP-------------GKDLEIILTKKP-LP 66 (403)
Q Consensus 16 ~l~~~~~~e~~~~----~~~~~~~~~D~vElRlD~-------l~~---~-~~-------------~~~l~~l~~~~~-~P 66 (403)
.++..++++++.+ ++.+.+.|.|.|||-.-+ |.+ . .+ .+.++.+|+... -|
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~ 221 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQR 221 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCc
Confidence 3444455444443 444567899999998764 111 1 11 134445555442 27
Q ss_pred EEEEeecCC-CCCCCCC-CHHHHHHHHHHHHHcCCcEEEEecccc-chHHHHHHhccCCCcEEEEeccCCCCCCCHhHHH
Q 015614 67 VLIVYRPKW-AGGLYEG-DEHKRLEALHLAEDLGADYVDFELKVA-SNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLG 143 (403)
Q Consensus 67 iI~T~R~~~-eGG~~~~-~~~~~~~ll~~~~~~g~~yvDiEl~~~-~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~ 143 (403)
|.+-++... .+|.... +.++..++.+.+.+.|++||++--... .++.+.++.. -...||+.= .+ +.++..
T Consensus 222 v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~--~~iPvi~~G-gi----t~e~a~ 294 (362)
T 4ab4_A 222 VGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREADDSIGPLIKEA--FGGPYIVNE-RF----DKASAN 294 (362)
T ss_dssp EEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHH--HCSCEEEES-SC----CHHHHH
T ss_pred eEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHH--CCCCEEEeC-CC----CHHHHH
Confidence 766665432 2232222 246788889999999999999864321 1233344322 123466552 11 223333
Q ss_pred HHHHHHHHcCCCEEEEEee
Q 015614 144 YLVSRMQATGADIIKLVFS 162 (403)
Q Consensus 144 ~~~~~~~~~gadivKia~~ 162 (403)
+.++. -+||.|=+...
T Consensus 295 ~~l~~---g~aD~V~iGR~ 310 (362)
T 4ab4_A 295 AALAS---GKADAVAFGVP 310 (362)
T ss_dssp HHHHT---TSCSEEEESHH
T ss_pred HHHHc---CCccEEEECHH
Confidence 33322 23777766544
No 471
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=75.25 E-value=39 Score=30.20 Aligned_cols=149 Identities=17% Similarity=0.099 Sum_probs=75.2
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC----chHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQP----GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAED 96 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~----~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~ 96 (403)
+..++. +.+.+.|+|.+.++ |.-..... .+.++.+++..++|+++. ||.. +.+ -++.+++
T Consensus 31 d~~~~a---~~~~~~Gad~i~v~-d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~------ggI~--~~~----~~~~~~~ 94 (253)
T 1thf_D 31 DPVELG---KFYSEIGIDELVFL-DITASVEKRKTMLELVEKVAEQIDIPFTVG------GGIH--DFE----TASELIL 94 (253)
T ss_dssp CHHHHH---HHHHHTTCCEEEEE-ESSCSSSHHHHHHHHHHHHHTTCCSCEEEE------SSCC--SHH----HHHHHHH
T ss_pred CHHHHH---HHHHHcCCCEEEEE-CCchhhcCCcccHHHHHHHHHhCCCCEEEe------CCCC--CHH----HHHHHHH
Confidence 444544 44456799999997 54322111 234566777779999984 4442 222 2455567
Q ss_pred cCCcEEEEecccc--chHHHHHHhccCC-CcEEEEecc-----------CCCCCCCHhHHHHHHHHHHHcCCCEEEEEee
Q 015614 97 LGADYVDFELKVA--SNILGKQYSSHQS-GTRFIVSCN-----------LDCETPSEEDLGYLVSRMQATGADIIKLVFS 162 (403)
Q Consensus 97 ~g~~yvDiEl~~~--~~~~~~l~~~~~~-~~kiI~S~H-----------~f~~tp~~~~l~~~~~~~~~~gadivKia~~ 162 (403)
.|++.|=+--... .+.+.++...... ...+-++.| .+.+. +.....+..+++.+.|++.+=+...
T Consensus 95 ~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~-~~~~~~e~~~~~~~~G~~~i~~~~~ 173 (253)
T 1thf_D 95 RGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKN-TGILLRDWVVEVEKRGAGEILLTSI 173 (253)
T ss_dssp TTCSEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEE-EEEEHHHHHHHHHHTTCSEEEEEET
T ss_pred cCCCEEEEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccc-cCCCHHHHHHHHHHCCCCEEEEEec
Confidence 7999987643321 2233344322111 122334443 21110 0113566677777889886544322
Q ss_pred cCCH----hHHHHHHHHhccCCCCEEEE
Q 015614 163 VNDI----TEIARIFQLLSHCQVPIIAY 186 (403)
Q Consensus 163 ~~~~----~D~~~ll~~~~~~~~p~i~~ 186 (403)
..+. -|...+.++....+.|+|+.
T Consensus 174 ~~~g~~~g~~~~~~~~l~~~~~ipvia~ 201 (253)
T 1thf_D 174 DRDGTKSGYDTEMIRFVRPLTTLPIIAS 201 (253)
T ss_dssp TTTTSCSCCCHHHHHHHGGGCCSCEEEE
T ss_pred cCCCCCCCCCHHHHHHHHHhcCCCEEEE
Confidence 2111 13333444444457787664
No 472
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=75.20 E-value=3.3 Score=40.52 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=31.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-.+--++..|.++|.+|+++.|..
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~ 176 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD 176 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 36899999999999999999999999999998864
No 473
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=74.94 E-value=3.2 Score=42.38 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=31.1
Q ss_pred CCCeEEEEc-chhHHHHHHHHHHHCCC-eEEEEecCC
Q 015614 367 AGRMFVLAG-AGGAGRALAFGAKSRGA-RVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilG-aGGaarai~~al~~~g~-~i~v~nR~~ 401 (403)
.+++++|.| +||.|++++..|.+.|+ +|.+++|+.
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~ 294 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRG 294 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCC
Confidence 468999998 58899999999999999 799999974
No 474
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=74.91 E-value=22 Score=34.66 Aligned_cols=91 Identities=15% Similarity=0.048 Sum_probs=54.1
Q ss_pred ecccCCHHHHH----HHHHHHHhcCCCEEEEEecC-------CCCC----CC-------------chHHHHHHhcCC-Cc
Q 015614 16 PLMAQSVEQVL----SNMYQAKAEGADVVEIRLDC-------INNF----QP-------------GKDLEIILTKKP-LP 66 (403)
Q Consensus 16 ~l~~~~~~e~~----~~~~~~~~~~~D~vElRlD~-------l~~~----~~-------------~~~l~~l~~~~~-~P 66 (403)
.++..++++.. ..++.+.+.|.|.|||-.-+ |.+. .+ .+.++.+|+... -|
T Consensus 156 ~mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~ 235 (376)
T 1icp_A 156 RLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDR 235 (376)
T ss_dssp ECCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCc
Confidence 45555655544 34455567899999998743 1111 11 133445555442 28
Q ss_pred EEEEeecC-CCCCCC-CCCHHHHHHHHHHHHHcCCcEEEEec
Q 015614 67 VLIVYRPK-WAGGLY-EGDEHKRLEALHLAEDLGADYVDFEL 106 (403)
Q Consensus 67 iI~T~R~~-~eGG~~-~~~~~~~~~ll~~~~~~g~~yvDiEl 106 (403)
+.+-++.. +.+|.. ..+.++..++.+.+.+.|++||++-.
T Consensus 236 V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 277 (376)
T 1icp_A 236 VGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVE 277 (376)
T ss_dssp EEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEEC
T ss_pred eEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 77766643 222321 22346788899999999999999854
No 475
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=74.80 E-value=3.2 Score=41.21 Aligned_cols=34 Identities=24% Similarity=0.242 Sum_probs=31.3
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.++++|+|+|-.|-.++..|.++|.+|+++.|..
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 200 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 5799999999999999999999999999998864
No 476
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=74.75 E-value=9.6 Score=34.31 Aligned_cols=146 Identities=16% Similarity=0.097 Sum_probs=73.6
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCC----CCCCchHHHHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHHHH
Q 015614 20 QSVEQVLSNMYQAKAEGADVVEIRLDCIN----NFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAE 95 (403)
Q Consensus 20 ~~~~e~~~~~~~~~~~~~D~vElRlD~l~----~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~ 95 (403)
.+..++.. .+.+.|+|.++++ |.-. .....+.++.++ ..++|+|+. ||.. +.+ -.+.++
T Consensus 30 ~~~~~~a~---~~~~~Gad~i~v~-d~~~~~~~~~~~~~~i~~i~-~~~ipvi~~------Ggi~--~~~----~~~~~~ 92 (241)
T 1qo2_A 30 KDPVELVE---KLIEEGFTLIHVV-DLSNAIENSGENLPVLEKLS-EFAEHIQIG------GGIR--SLD----YAEKLR 92 (241)
T ss_dssp SCHHHHHH---HHHHTTCCCEEEE-EHHHHHHCCCTTHHHHHHGG-GGGGGEEEE------SSCC--SHH----HHHHHH
T ss_pred cCHHHHHH---HHHHcCCCEEEEe-cccccccCCchhHHHHHHHH-hcCCcEEEE------CCCC--CHH----HHHHHH
Confidence 44555544 4456799999995 4311 111234455555 668999975 5543 222 223455
Q ss_pred HcCCcEEEEeccc--cchHHHHHHhccCCCcEEE--Eecc-------CCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecC
Q 015614 96 DLGADYVDFELKV--ASNILGKQYSSHQSGTRFI--VSCN-------LDCETPSEEDLGYLVSRMQATGADIIKLVFSVN 164 (403)
Q Consensus 96 ~~g~~yvDiEl~~--~~~~~~~l~~~~~~~~kiI--~S~H-------~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~ 164 (403)
+.|++.|=+--.. .++.+.++ ... + .+++ ++.| .+.+. +.....+...++.+.|++.+=+.....
T Consensus 93 ~~Gad~V~lg~~~l~~p~~~~~~-~~~-g-~~i~~~~d~~~~~v~~~g~~~~-~~~~~~e~~~~~~~~G~~~i~~t~~~~ 168 (241)
T 1qo2_A 93 KLGYRRQIVSSKVLEDPSFLKSL-REI-D-VEPVFSLDTRGGRVAFKGWLAE-EEIDPVSLLKRLKEYGLEEIVHTEIEK 168 (241)
T ss_dssp HTTCCEEEECHHHHHCTTHHHHH-HTT-T-CEEEEEEEEETTEECCTTCSSC-SCCCHHHHHHHHHTTTCCEEEEEETTH
T ss_pred HCCCCEEEECchHhhChHHHHHH-HHc-C-CcEEEEEEecCCEEEECCceec-CCCCHHHHHHHHHhCCCCEEEEEeecc
Confidence 6789988663322 22334444 222 2 3443 4553 22111 001345666777788998664432211
Q ss_pred C----HhHHHHHHHHhccCCCCEEEE
Q 015614 165 D----ITEIARIFQLLSHCQVPIIAY 186 (403)
Q Consensus 165 ~----~~D~~~ll~~~~~~~~p~i~~ 186 (403)
+ ..|...+.++....+.|+|+.
T Consensus 169 ~g~~~g~~~~~i~~l~~~~~iPvia~ 194 (241)
T 1qo2_A 169 DGTLQEHDFSLTKKIAIEAEVKVLAA 194 (241)
T ss_dssp HHHTCCCCHHHHHHHHHHHTCEEEEE
T ss_pred cccCCcCCHHHHHHHHHhcCCcEEEE
Confidence 1 113333333344447888774
No 477
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=74.68 E-value=3.2 Score=41.40 Aligned_cols=34 Identities=26% Similarity=0.289 Sum_probs=31.2
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.++++|+|+|-.|--++..|.++|.+|+++.|..
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 5799999999999999999999999999998863
No 478
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=74.65 E-value=40 Score=30.99 Aligned_cols=85 Identities=9% Similarity=0.032 Sum_probs=52.9
Q ss_pred EEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCc------------------hHHHHHHhc-CCCcEEEEee-
Q 015614 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG------------------KDLEIILTK-KPLPVLIVYR- 72 (403)
Q Consensus 13 icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~------------------~~l~~l~~~-~~~PiI~T~R- 72 (403)
..++.-.|+++.....++...+.|||+|||-+-+-.+.-+. ..+..+++. ...|+++--.
T Consensus 18 ~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~ 97 (252)
T 3tha_A 18 AYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYY 97 (252)
T ss_dssp EEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEecc
Confidence 35667789999999888887788999999999887654321 112222221 1379876533
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEE
Q 015614 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDF 104 (403)
Q Consensus 73 ~~~eGG~~~~~~~~~~~ll~~~~~~g~~yvDi 104 (403)
.. .-.--.-++++.+.+.|++-+=|
T Consensus 98 N~-------i~~~G~e~F~~~~~~aGvdG~Ii 122 (252)
T 3tha_A 98 NL-------IFSYGLEKFVKKAKSLGICALIV 122 (252)
T ss_dssp HH-------HHHHCHHHHHHHHHHTTEEEEEC
T ss_pred CH-------HHHhhHHHHHHHHHHcCCCEEEe
Confidence 21 00001235778888899776543
No 479
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=74.54 E-value=2.9 Score=40.50 Aligned_cols=33 Identities=6% Similarity=-0.089 Sum_probs=27.4
Q ss_pred CCCCeEEEEcc-hhHHHHHHHHHHHCCCeEEEEe
Q 015614 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFD 398 (403)
Q Consensus 366 ~~~~~~lilGa-GGaarai~~al~~~g~~i~v~n 398 (403)
..|++++|+|+ |+.+.+++..++..|++|+.+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~ 196 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC 196 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 45789999999 7899999998889999765553
No 480
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=74.34 E-value=3.3 Score=41.69 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=31.9
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-.|--++..|.++|.+|+++.|..
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 36899999999999999999999999999998864
No 481
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=74.18 E-value=3.6 Score=40.63 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=31.6
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-.+--++..|.+.|.+|+++.|..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~ 182 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA 182 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 36899999999999999999999999999998753
No 482
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=74.17 E-value=38 Score=32.24 Aligned_cols=198 Identities=13% Similarity=0.105 Sum_probs=103.5
Q ss_pred EecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcEEEE-eecCCCCCCCCCCHHHHHHHHHH
Q 015614 15 APLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV-YRPKWAGGLYEGDEHKRLEALHL 93 (403)
Q Consensus 15 v~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T-~R~~~eGG~~~~~~~~~~~ll~~ 93 (403)
++++..+.-++...+ .+.|.|.||.=.....+ .+.+.+..+++..+-+-+.. .|.. .+ -++.
T Consensus 23 ~~~~~~~Kl~ia~~L---~~~Gv~~IE~g~p~~~~-~d~e~v~~i~~~~~~~~i~~l~r~~---------~~----~i~~ 85 (325)
T 3eeg_A 23 CQLNTEEKIIVAKAL---DELGVDVIEAGFPVSSP-GDFNSVVEITKAVTRPTICALTRAK---------EA----DINI 85 (325)
T ss_dssp --CCTTHHHHHHHHH---HHHTCSEEEEECTTSCH-HHHHHHHHHHHHCCSSEEEEECCSC---------HH----HHHH
T ss_pred CCCCHHHHHHHHHHH---HHcCCCEEEEeCCCCCH-hHHHHHHHHHHhCCCCEEEEeecCC---------HH----HHHH
Confidence 344444445555444 44699999997543222 11345566665443333433 3532 11 2233
Q ss_pred HHHc----CCcEEEEeccccchH---------------HHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcC
Q 015614 94 AEDL----GADYVDFELKVASNI---------------LGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATG 153 (403)
Q Consensus 94 ~~~~----g~~yvDiEl~~~~~~---------------~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~g 153 (403)
+++. |++.|.+=....+-. ..+.+ ..+..+..+..+.=+...+ +.+.+.++.+++.+.|
T Consensus 86 a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~-~~~~~~~~~~~~~~~G 164 (325)
T 3eeg_A 86 AGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRA-DQAFLARMVEAVIEAG 164 (325)
T ss_dssp HHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGS-CHHHHHHHHHHHHHHT
T ss_pred HHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccc-hHHHHHHHHHHHHhcC
Confidence 4444 888888744333211 11222 2344566676655443333 3577999999999999
Q ss_pred CCEEEEEeecC--CHhHHHHHHHHhcc-CC----CCEEEEEcCc--cchhhhhhcCCCCCcccccccCC-CCCCCCCCHH
Q 015614 154 ADIIKLVFSVN--DITEIARIFQLLSH-CQ----VPIIAYSVGE--RGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVE 223 (403)
Q Consensus 154 adivKia~~~~--~~~D~~~ll~~~~~-~~----~p~i~~~MG~--~G~~SRil~~~~gs~lty~~~~~-~sApGQ~~~~ 223 (403)
||.+-++=+.- ++.++.++++.+.+ .+ .|+-.=+=-. .+...-+..-..|....=+++.+ +-+.|+++++
T Consensus 165 ~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~GlGer~GN~~lE 244 (325)
T 3eeg_A 165 ADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTINGIGERAGNTALE 244 (325)
T ss_dssp CSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGGGCCSTTCCCBHH
T ss_pred CCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEecccccccccchhHH
Confidence 99988876653 57888888776543 22 3332111111 22222222212233222233322 2468999999
Q ss_pred HHHhhhh
Q 015614 224 SLRQTYK 230 (403)
Q Consensus 224 ~l~~~~~ 230 (403)
++...++
T Consensus 245 ~vv~~L~ 251 (325)
T 3eeg_A 245 EVVMAME 251 (325)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9876665
No 483
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=74.15 E-value=2.8 Score=42.83 Aligned_cols=37 Identities=16% Similarity=0.311 Sum_probs=33.3
Q ss_pred CCCCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 365 ~~~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+.+|+++|+|+|-+|--++..|.+.|.+|+++.|++
T Consensus 183 ~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 183 DFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred ccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 3568999999999999999999999988999999975
No 484
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=73.98 E-value=96 Score=32.93 Aligned_cols=209 Identities=13% Similarity=0.099 Sum_probs=114.3
Q ss_pred CHHHHHHHHHHHHhcCCCE--EEEE----ec----CCCCCCCchHHHHHHhcC-CCcEEEEeecCCCCCCCCCCHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADV--VEIR----LD----CINNFQPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLE 89 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~--vElR----lD----~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (403)
+.++.+.-++...+.|+|+ ||.= +| ++. .++.+.+..+++.. +.++-.-.|..+-=|.....+....+
T Consensus 123 ~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~-e~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~ 201 (718)
T 3bg3_A 123 RTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLY-ECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFK 201 (718)
T ss_dssp CHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSC-CCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCC-CCHHHHHHHHHHHcccchHHHHhcccccccccccCCcchHH
Confidence 3455555555544565555 9973 33 333 34556777777654 45665566754444544566666677
Q ss_pred HHHHHHHcCCcEEEEeccccc--hHHHHHHhccCCCcEE--EEeccC-CCCC---C-CHhHHHHHHHHHHHcCCCEEEEE
Q 015614 90 ALHLAEDLGADYVDFELKVAS--NILGKQYSSHQSGTRF--IVSCNL-DCET---P-SEEDLGYLVSRMQATGADIIKLV 160 (403)
Q Consensus 90 ll~~~~~~g~~yvDiEl~~~~--~~~~~l~~~~~~~~ki--I~S~H~-f~~t---p-~~~~l~~~~~~~~~~gadivKia 160 (403)
.++.+.+.|++.|-|=....+ .+.+.+...+..+..+ -+||-. |... . +.+.+.++.+++.+.|||++-|+
T Consensus 202 ~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~ 281 (718)
T 3bg3_A 202 FCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIK 281 (718)
T ss_dssp HHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 889999999999887554432 1222221222333333 345431 2211 1 45789999999999999999988
Q ss_pred eecC--CHhHHHHHHHHhcc-C-CCCEEEEE--cCccchhhhhhcCCCCCcccccccCC-CCCCCCCCHHHHHhhhh
Q 015614 161 FSVN--DITEIARIFQLLSH-C-QVPIIAYS--VGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYK 230 (403)
Q Consensus 161 ~~~~--~~~D~~~ll~~~~~-~-~~p~i~~~--MG~~G~~SRil~~~~gs~lty~~~~~-~sApGQ~~~~~l~~~~~ 230 (403)
=|.- ++.++.++.+.+.+ . +.|+-.=+ .--.+...-+..-.-|....=+++.. +-..||++++++...++
T Consensus 282 DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGertGN~~lE~vv~~L~ 358 (718)
T 3bg3_A 282 DMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQPSMGALVACTR 358 (718)
T ss_dssp CTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHT
T ss_pred CcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcccccccCchhHHHHHHHHH
Confidence 6664 57888777766532 2 34432111 12222222222222233332233321 13466766666655444
No 485
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=73.98 E-value=23 Score=33.16 Aligned_cols=194 Identities=13% Similarity=0.089 Sum_probs=100.3
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCC------CCchHHH-HHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNF------QPGKDLE-IILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHL 93 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~------~~~~~l~-~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 93 (403)
+.++.++-++...+.|.|.||+=- +... .+.+.+. .+++..+.++...+ .. .+-++.
T Consensus 25 ~~e~k~~i~~~L~~~Gv~~IE~g~--~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~----------~~----~~~i~~ 88 (298)
T 2cw6_A 25 STPVKIKLIDMLSEAGLSVIETTS--FVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT----------PN----LKGFEA 88 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEECCEE--CCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC----------CS----HHHHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEECC--CcCcccccccCCHHHHHHHHhhCCCCEEEEEc----------CC----HHhHHH
Confidence 346666666666678999999964 1110 1112222 22221122322211 11 123678
Q ss_pred HHHcCCcEEEEeccccchH---------------HHHHH-hccCCCcEEE--EeccC---CCCCCCHhHHHHHHHHHHHc
Q 015614 94 AEDLGADYVDFELKVASNI---------------LGKQY-SSHQSGTRFI--VSCNL---DCETPSEEDLGYLVSRMQAT 152 (403)
Q Consensus 94 ~~~~g~~yvDiEl~~~~~~---------------~~~l~-~~~~~~~kiI--~S~H~---f~~tp~~~~l~~~~~~~~~~ 152 (403)
+++.|++.|.|-....+.. ..+.+ ..+..+.++- +++.. +...-+.+++.++++++.+.
T Consensus 89 a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (298)
T 2cw6_A 89 AVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSM 168 (298)
T ss_dssp HHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHT
T ss_pred HHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHc
Confidence 8889999999865544321 11112 2333455553 33321 11111467899999999999
Q ss_pred CCCEEEEEeecC--CHhHHHHHHHHhccC--CCCEEEEEcCccch--hhhhhcCCCCCcccccccC---C-CC---CCCC
Q 015614 153 GADIIKLVFSVN--DITEIARIFQLLSHC--QVPIIAYSVGERGL--VSQLLSPKFNGALVYGSLK---G-TP---VLGL 219 (403)
Q Consensus 153 gadivKia~~~~--~~~D~~~ll~~~~~~--~~p~i~~~MG~~G~--~SRil~~~~gs~lty~~~~---~-~s---ApGQ 219 (403)
|+|.+.++=+.- ++.++.++++.+.+. +.|+-.=+=-..|. ..-+..-.-|....-+++. + |- +.|+
T Consensus 169 Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~cp~a~g~aGN 248 (298)
T 2cw6_A 169 GCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGN 248 (298)
T ss_dssp TCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSCCB
T ss_pred CCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeecccccCCCCCCCCcCC
Confidence 999999986553 588888887776432 24443222122222 1111111123322222322 2 22 3578
Q ss_pred CCHHHHHhhhh
Q 015614 220 PTVESLRQTYK 230 (403)
Q Consensus 220 ~~~~~l~~~~~ 230 (403)
.+.+++...++
T Consensus 249 ~~~E~lv~~l~ 259 (298)
T 2cw6_A 249 LATEDLVYMLE 259 (298)
T ss_dssp CBHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 98888887765
No 486
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=73.91 E-value=2 Score=46.12 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=31.4
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
-+++.|||||-+++.|++.++..|++|+++++++
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 4799999999999999999999999999998864
No 487
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=73.87 E-value=2.9 Score=42.39 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=31.1
Q ss_pred CCCeEEEEc-chhHHHHHHHHHHHCCC-eEEEEecCC
Q 015614 367 AGRMFVLAG-AGGAGRALAFGAKSRGA-RVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilG-aGGaarai~~al~~~g~-~i~v~nR~~ 401 (403)
.+++++|.| +||.|++++..|.+.|+ +|++++|+.
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~ 261 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSG 261 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 478999998 58899999999999999 699999974
No 488
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=73.82 E-value=4 Score=40.37 Aligned_cols=67 Identities=21% Similarity=0.206 Sum_probs=42.1
Q ss_pred EEEEeccHHHHHHHHHHHHH---hcCcCCCCCcCCCCCCCCeEEEEcc-hhHHHHHHHHHH-HCCCeEEEEecCC
Q 015614 332 LIGYNTDCEASITAIEDAIK---ERGYKNGTASFGSPLAGRMFVLAGA-GGAGRALAFGAK-SRGARVVIFDIDF 401 (403)
Q Consensus 332 l~G~NTD~~G~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~lilGa-GGaarai~~al~-~~g~~i~v~nR~~ 401 (403)
.+-.|+--.|..+..++... +..+.. .......+|++||+|+ .|-++|++-+|+ ..|+.+.++.|+.
T Consensus 14 ~i~~~~hp~gc~~~v~~qi~~v~~~~~~~---~~~~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~ 85 (401)
T 4ggo_A 14 NICLNAHPQGCKKGVEDQIEYTKKRITAE---VKAGAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEK 85 (401)
T ss_dssp TEECCCCHHHHHHHHHHHHHHHHHHSCHH---HHTTSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCC
T ss_pred eeEccCCchHHHHHHHHHHHHHHhcCCcC---cCcccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCC
Confidence 45567777777766543211 111000 0011234699999995 899999999988 6788877777654
No 489
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=73.81 E-value=51 Score=29.88 Aligned_cols=43 Identities=26% Similarity=0.235 Sum_probs=26.7
Q ss_pred HHHHHHhcCCCEEEEEecCCCCCCCchHHHHHHhcCCCcE-EEEe
Q 015614 28 NMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV-LIVY 71 (403)
Q Consensus 28 ~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~Pi-I~T~ 71 (403)
.++.+.+.|.|.||+..+...+. ..+++..+.+..++++ -++.
T Consensus 46 ~l~~~~~~G~~~vEl~~~~~~~~-~~~~~~~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 46 GMELAKRVGYQAVEIAVRDPSIV-DWNEVKILSEELNLPICAIGT 89 (290)
T ss_dssp HHHHHHHHTCSEEEEECSCGGGS-CHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHhCCCEEEEcCCCcchh-hHHHHHHHHHHcCCeEEEEec
Confidence 34455567999999998743322 2345666666667776 3443
No 490
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=73.76 E-value=2 Score=42.47 Aligned_cols=35 Identities=6% Similarity=0.025 Sum_probs=30.8
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHC--CCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~--g~~i~v~nR~~ 401 (403)
.+++++|+|+|-+|--++..|.+. |.+|+++.|..
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~ 262 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRAS 262 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 478999999999999999999988 66999998864
No 491
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=73.68 E-value=2.6 Score=40.05 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=31.5
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
.+++++|+|+|-+|--++..|.+.|.+|+++.|..
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 57899999999999999999999999999998864
No 492
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=73.63 E-value=7.2 Score=37.90 Aligned_cols=49 Identities=16% Similarity=0.361 Sum_probs=35.0
Q ss_pred CCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHhHHHHHHHHhccCCCCEEE
Q 015614 135 ETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185 (403)
Q Consensus 135 ~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~D~~~ll~~~~~~~~p~i~ 185 (403)
.|-+.+...+++.++.+.|||||++++.. .++...+-......+.|+++
T Consensus 41 ~T~D~~atv~Qi~~l~~aG~diVRvavp~--~~~a~al~~I~~~~~vPlva 89 (366)
T 3noy_A 41 KTHDVEATLNQIKRLYEAGCEIVRVAVPH--KEDVEALEEIVKKSPMPVIA 89 (366)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCEEEEECCS--HHHHHHHHHHHHHCSSCEEE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCCCC--hHHHHHHHHHHhcCCCCEEE
Confidence 34466788999999999999999999874 45544444444445666654
No 493
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=73.49 E-value=24 Score=33.90 Aligned_cols=86 Identities=17% Similarity=0.300 Sum_probs=52.6
Q ss_pred ecccCCHHHHHHH----HHHHHhcCCCEEEEEec-------CCCCC----CC-------------chHHHHHHhcC--CC
Q 015614 16 PLMAQSVEQVLSN----MYQAKAEGADVVEIRLD-------CINNF----QP-------------GKDLEIILTKK--PL 65 (403)
Q Consensus 16 ~l~~~~~~e~~~~----~~~~~~~~~D~vElRlD-------~l~~~----~~-------------~~~l~~l~~~~--~~ 65 (403)
.++..++++++.+ ++.+.+.|.|.|||--- ++.+. .+ .+.++.+|+.. +.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 3444555444443 44456789999999732 11110 11 14455666665 67
Q ss_pred cEEEEeecC--CCCCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015614 66 PVLIVYRPK--WAGGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (403)
Q Consensus 66 PiI~T~R~~--~eGG~~~~~~~~~~~ll~~~~~~g~~yvDiE 105 (403)
|+.+-++.. .+|| .+.++..++.+.+.+. ++||++-
T Consensus 212 pv~vRls~~~~~~~g---~~~~~~~~~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 212 PIFVRVSADDYMEGG---INIDMMVEYINMIKDK-VDLIDVS 249 (343)
T ss_dssp CEEEEEECCCSSTTS---CCHHHHHHHHHHHTTT-CSEEEEE
T ss_pred CeEEEeechhhhccC---ccHHHHHHHHHHhhcc-ccEEecc
Confidence 888777753 2233 2567888888888888 9999984
No 494
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=73.48 E-value=3.6 Score=40.89 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=31.3
Q ss_pred CCeEEEEcchhHHHHHHHHHHHCCCeEEEEecCC
Q 015614 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (403)
Q Consensus 368 ~~~~lilGaGGaarai~~al~~~g~~i~v~nR~~ 401 (403)
+++++|+|+|-.|--++..|.++|.+|+++.|..
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP 204 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 5899999999999999999999999999998863
No 495
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=73.33 E-value=20 Score=34.73 Aligned_cols=138 Identities=15% Similarity=0.057 Sum_probs=75.3
Q ss_pred EecccCCHHHHHHH----HHHHHhcCCCEEEEEecC-------CCC---C-CC-------------chHHHHHHhcCC-C
Q 015614 15 APLMAQSVEQVLSN----MYQAKAEGADVVEIRLDC-------INN---F-QP-------------GKDLEIILTKKP-L 65 (403)
Q Consensus 15 v~l~~~~~~e~~~~----~~~~~~~~~D~vElRlD~-------l~~---~-~~-------------~~~l~~l~~~~~-~ 65 (403)
-.++..++++++.+ ++.+.+.|.|.|||-.-+ |.+ . .+ .+.++.+|+... -
T Consensus 149 r~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~ 228 (361)
T 3gka_A 149 RALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAA 228 (361)
T ss_dssp EECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGG
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCC
Confidence 35666676665554 344567899999998764 111 1 11 134455565442 2
Q ss_pred cEEEEeecC-CCCCCCCC-CHHHHHHHHHHHHHcCCcEEEEecccc-chHHHHHHhccCCCcEEEEeccCCCCCCCHhHH
Q 015614 66 PVLIVYRPK-WAGGLYEG-DEHKRLEALHLAEDLGADYVDFELKVA-SNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142 (403)
Q Consensus 66 PiI~T~R~~-~eGG~~~~-~~~~~~~ll~~~~~~g~~yvDiEl~~~-~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l 142 (403)
||.+-++.. ..+|.... +.++..++.+.+.+.|++||++--... .++.+.++.. -...||+.=- + + .++.
T Consensus 229 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~--~~iPvi~~Gg-i--t--~e~a 301 (361)
T 3gka_A 229 RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGDAIGQQLKAA--FGGPFIVNEN-F--T--LDSA 301 (361)
T ss_dssp GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTTCCHHHHHHH--HCSCEEEESS-C--C--HHHH
T ss_pred eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHH--cCCCEEEeCC-C--C--HHHH
Confidence 776666543 12333222 246788889999999999999865331 1233444322 1234666522 2 2 3333
Q ss_pred HHHHHHHHHcC-CCEEEEEeec
Q 015614 143 GYLVSRMQATG-ADIIKLVFSV 163 (403)
Q Consensus 143 ~~~~~~~~~~g-adivKia~~~ 163 (403)
.+.+ +.| ||.|=+....
T Consensus 302 ~~~l----~~G~aD~V~iGR~~ 319 (361)
T 3gka_A 302 QAAL----DAGQADAVAWGKLF 319 (361)
T ss_dssp HHHH----HTTSCSEEEESHHH
T ss_pred HHHH----HcCCccEEEECHHh
Confidence 3333 334 7777666543
No 496
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=73.22 E-value=35 Score=32.19 Aligned_cols=142 Identities=13% Similarity=0.092 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCC------CCchHH-HHHHhcCCCcEEEEeecCCCCCCCCCCHHHHHHHHHH
Q 015614 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNF------QPGKDL-EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHL 93 (403)
Q Consensus 21 ~~~e~~~~~~~~~~~~~D~vElRlD~l~~~------~~~~~l-~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 93 (403)
+.++.++-++...+.|.|.||.=- +... .+.+++ ..+.+..+.++..-++ .. +-++.
T Consensus 26 ~~e~k~~i~~~L~~~Gv~~IE~g~--~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~~----------~~----~~i~~ 89 (307)
T 1ydo_A 26 ATEDKITWINQLSRTGLSYIEITS--FVHPKWIPALRDAIDVAKGIDREKGVTYAALVP----------NQ----RGLEN 89 (307)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEEE--CSCTTTCGGGTTHHHHHHHSCCCTTCEEEEECC----------SH----HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECC--CcCcccccccCCHHHHHHHhhhcCCCeEEEEeC----------CH----HhHHH
Confidence 345556556666678999999963 1110 111222 2222222333332222 11 23677
Q ss_pred HHHcCCcEEEEeccccch---------------HHHHHH-hccCCCcEEEEeccC-CC----CCCCHhHHHHHHHHHHHc
Q 015614 94 AEDLGADYVDFELKVASN---------------ILGKQY-SSHQSGTRFIVSCNL-DC----ETPSEEDLGYLVSRMQAT 152 (403)
Q Consensus 94 ~~~~g~~yvDiEl~~~~~---------------~~~~l~-~~~~~~~kiI~S~H~-f~----~tp~~~~l~~~~~~~~~~ 152 (403)
+++.|++.|.+-....+- ...+.+ ..+..+.++-++.-. |. ..-+.+.+.++++++.+.
T Consensus 90 a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (307)
T 1ydo_A 90 ALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEF 169 (307)
T ss_dssp HHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred HHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhc
Confidence 888899999986544331 111222 233445555432221 21 112457899999999999
Q ss_pred CCCEEEEEeec--CCHhHHHHHHHHhcc
Q 015614 153 GADIIKLVFSV--NDITEIARIFQLLSH 178 (403)
Q Consensus 153 gadivKia~~~--~~~~D~~~ll~~~~~ 178 (403)
|+|.+-|+=+. -++.++.++++.+.+
T Consensus 170 Ga~~i~l~DT~G~~~P~~v~~lv~~l~~ 197 (307)
T 1ydo_A 170 GISELSLGDTIGAANPAQVETVLEALLA 197 (307)
T ss_dssp TCSCEEEECSSCCCCHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCCCCcCHHHHHHHHHHHHH
Confidence 99999988554 368888888887654
No 497
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=73.12 E-value=63 Score=31.37 Aligned_cols=157 Identities=8% Similarity=0.052 Sum_probs=93.3
Q ss_pred cCCHHHHHHHHHHHHhcCCCEEEEE---ecCCCCC-C-CchHHHHHHhcC--CCcEEEEeecCCCCCCCCCCHHHHHHHH
Q 015614 19 AQSVEQVLSNMYQAKAEGADVVEIR---LDCINNF-Q-PGKDLEIILTKK--PLPVLIVYRPKWAGGLYEGDEHKRLEAL 91 (403)
Q Consensus 19 ~~~~~e~~~~~~~~~~~~~D~vElR---lD~l~~~-~-~~~~l~~l~~~~--~~PiI~T~R~~~eGG~~~~~~~~~~~ll 91 (403)
..+.+++..++.++.+.|.+.+++. +.. +. + ..+.++.+|+.. +.|+.+-.. | .|..+.++-.+++
T Consensus 143 ~~~~~~~~~~a~~~~~~Gf~~iKik~spvG~--~~~~~~~e~v~avr~a~G~d~~l~vDan----~-~~~~~~~~a~~~~ 215 (401)
T 2hzg_A 143 GDTPQETLERARAARRDGFAAVKFGWGPIGR--GTVAADADQIMAAREGLGPDGDLMVDVG----Q-IFGEDVEAAAARL 215 (401)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEESTTTTS--SCHHHHHHHHHHHHHHHCSSSEEEEECT----T-TTTTCHHHHHTTH
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEcCCCCCC--CHHHHHHHHHHHHHHHhCCCCeEEEECC----C-CCCCCHHHHHHHH
Confidence 5689999999988888999999997 421 11 1 124455666644 577776442 2 2311345667778
Q ss_pred HHHHHcCCcEEEEeccccchHHHHHHhcc--CCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEe-ecCCHhH
Q 015614 92 HLAEDLGADYVDFELKVASNILGKQYSSH--QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF-SVNDITE 168 (403)
Q Consensus 92 ~~~~~~g~~yvDiEl~~~~~~~~~l~~~~--~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~-~~~~~~D 168 (403)
+.+.+++++|| |--.+.+....+...+ .-.+.|++-=.. -+.+++.+.++ .-.+|++-+=. ..-....
T Consensus 216 ~~l~~~~i~~i--EqP~~~~d~~~~~~l~~~~~~iPI~~dE~~----~~~~~~~~~i~---~~~~d~v~ik~~~~GGit~ 286 (401)
T 2hzg_A 216 PTLDAAGVLWL--EEPFDAGALAAHAALAGRGARVRIAGGEAA----HNFHMAQHLMD---YGRIGFIQIDCGRIGGLGP 286 (401)
T ss_dssp HHHHHTTCSEE--ECCSCTTCHHHHHHHHTTCCSSEEEECTTC----SSHHHHHHHHH---HSCCSEEEECHHHHTSHHH
T ss_pred HHHHhcCCCEE--ECCCCccCHHHHHHHHhhCCCCCEEecCCc----CCHHHHHHHHH---CCCCCEEEeCcchhCCHHH
Confidence 88888899996 4333332222222211 235566554221 12334444333 33478887743 3457888
Q ss_pred HHHHHHHhccCCCCEEEEEcCccc
Q 015614 169 IARIFQLLSHCQVPIIAYSVGERG 192 (403)
Q Consensus 169 ~~~ll~~~~~~~~p~i~~~MG~~G 192 (403)
..++.++....+.+++ ..|++.+
T Consensus 287 ~~~i~~~A~~~g~~~~-~h~~es~ 309 (401)
T 2hzg_A 287 AKRVADAAQARGITYV-NHTFTSH 309 (401)
T ss_dssp HHHHHHHHHHHTCEEE-ECCCSCH
T ss_pred HHHHHHHHHHcCCEEe-cCCCCcH
Confidence 8888888887788755 5577655
No 498
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=73.08 E-value=21 Score=39.46 Aligned_cols=87 Identities=20% Similarity=0.292 Sum_probs=59.6
Q ss_pred CCeeEEEecccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCC-----------CC---chHHHHHHhcCCCcEEEEeecC
Q 015614 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNF-----------QP---GKDLEIILTKKPLPVLIVYRPK 74 (403)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~-----------~~---~~~l~~l~~~~~~PiI~T~R~~ 74 (403)
+.|.+.--..+.+.+++..-++.+.+.|+|+||+-+.+=... ++ .+.++.+++..++|+++-++..
T Consensus 634 ~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~ 713 (1025)
T 1gte_A 634 DNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPN 713 (1025)
T ss_dssp TSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSC
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCC
Confidence 345554444678888888878777778999999987752211 11 1345566666799999988752
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCcEEEE
Q 015614 75 WAGGLYEGDEHKRLEALHLAEDLGADYVDF 104 (403)
Q Consensus 75 ~eGG~~~~~~~~~~~ll~~~~~~g~~yvDi 104 (403)
. . .-.++.+.+.+.|+++|++
T Consensus 714 ~-------~--~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 714 V-------T--DIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp S-------S--CHHHHHHHHHHHTCSEEEE
T ss_pred h-------H--HHHHHHHHHHHcCCCEEEE
Confidence 1 1 2455667788899999998
No 499
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=73.00 E-value=3.7 Score=41.82 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=29.9
Q ss_pred CCeEEEEc-chhHHHHHHHHHHHCCC-eEEEEecC
Q 015614 368 GRMFVLAG-AGGAGRALAFGAKSRGA-RVVIFDID 400 (403)
Q Consensus 368 ~~~~lilG-aGGaarai~~al~~~g~-~i~v~nR~ 400 (403)
++++||.| +||.+++++..|.+.|+ +|.+++|+
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~ 273 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRR 273 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCC
Confidence 48999998 58899999999999999 89999986
No 500
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=72.92 E-value=3.4 Score=41.43 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=31.1
Q ss_pred CCCeEEEEcchhHHHHHHHHHHHCCCeEEEEecC
Q 015614 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (403)
Q Consensus 367 ~~~~~lilGaGGaarai~~al~~~g~~i~v~nR~ 400 (403)
.+++++|+|+|-+|-.++..|.+.|.+|+++.|.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 218 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERN 218 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeC
Confidence 3689999999999999999999999999999875
Done!