Query 015619
Match_columns 403
No_of_seqs 174 out of 1458
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 08:00:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015619.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015619hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK12425 fumarate hydratase; P 100.0 5.6E-96 1E-100 745.4 43.5 402 1-402 58-461 (464)
2 PLN00134 fumarate hydratase; P 100.0 2.4E-95 5E-100 740.4 43.5 401 2-403 53-456 (458)
3 PRK00485 fumC fumarate hydrata 100.0 9E-93 2E-97 724.5 43.8 400 2-402 61-463 (464)
4 PRK14515 aspartate ammonia-lya 100.0 2.2E-92 4.7E-97 719.3 42.8 399 2-401 68-468 (479)
5 TIGR00979 fumC_II fumarate hyd 100.0 7.6E-92 1.6E-96 714.8 42.9 399 2-400 58-458 (458)
6 PRK13353 aspartate ammonia-lya 100.0 1.8E-90 3.9E-95 707.9 42.1 399 2-401 62-462 (473)
7 PRK12273 aspA aspartate ammoni 100.0 6.9E-90 1.5E-94 703.5 41.9 399 2-401 64-464 (472)
8 COG0114 FumC Fumarase [Energy 100.0 5.1E-89 1.1E-93 651.9 41.0 401 1-401 59-461 (462)
9 cd01357 Aspartase Aspartase. T 100.0 1.3E-87 2.8E-92 683.6 42.3 392 2-394 57-450 (450)
10 TIGR00839 aspA aspartate ammon 100.0 8E-87 1.7E-91 678.2 43.0 399 2-401 59-460 (468)
11 cd01362 Fumarase_classII Class 100.0 1.4E-86 3.1E-91 676.2 43.9 396 2-397 57-454 (455)
12 COG1027 AspA Aspartate ammonia 100.0 4.7E-86 1E-90 629.6 38.6 400 1-401 62-463 (471)
13 cd01596 Aspartase_like asparta 100.0 4.2E-85 9.1E-90 664.0 43.0 392 2-394 57-450 (450)
14 COG0165 ArgH Argininosuccinate 100.0 2.9E-82 6.4E-87 627.2 34.9 370 2-400 48-433 (459)
15 PLN02646 argininosuccinate lya 100.0 9.9E-78 2.1E-82 613.7 38.0 368 2-400 61-446 (474)
16 TIGR00838 argH argininosuccina 100.0 4.4E-77 9.6E-82 609.4 37.8 371 2-400 44-430 (455)
17 PRK09053 3-carboxy-cis,cis-muc 100.0 2.8E-77 6.1E-82 610.0 33.9 377 2-402 43-436 (452)
18 KOG1317 Fumarase [Energy produ 100.0 1.2E-75 2.5E-80 544.9 31.3 401 2-402 87-487 (487)
19 PRK00855 argininosuccinate lya 100.0 3.3E-75 7.2E-80 595.8 37.3 368 2-400 49-434 (459)
20 PRK06705 argininosuccinate lya 100.0 1.9E-75 4.1E-80 600.7 35.3 368 2-401 54-448 (502)
21 cd01597 pCLME prokaryotic 3-ca 100.0 6E-75 1.3E-79 591.6 34.3 375 2-403 37-428 (437)
22 PRK04833 argininosuccinate lya 100.0 3.6E-74 7.8E-79 586.3 37.7 368 2-400 46-432 (455)
23 cd01359 Argininosuccinate_lyas 100.0 1.7E-73 3.7E-78 580.9 36.5 369 2-401 25-412 (435)
24 KOG1316 Argininosuccinate lyas 100.0 1.7E-74 3.6E-79 540.9 24.7 364 1-400 50-435 (464)
25 PRK07492 adenylosuccinate lyas 100.0 3.9E-73 8.4E-78 574.8 35.2 371 2-402 36-424 (435)
26 TIGR00928 purB adenylosuccinat 100.0 3.9E-73 8.4E-78 577.7 33.0 373 2-402 36-428 (435)
27 PRK08470 adenylosuccinate lyas 100.0 9.6E-73 2.1E-77 573.9 34.5 367 2-402 36-433 (442)
28 PRK08540 adenylosuccinate lyas 100.0 6.4E-73 1.4E-77 577.9 31.8 373 2-402 41-433 (449)
29 PRK07380 adenylosuccinate lyas 100.0 6.6E-72 1.4E-76 565.2 36.3 364 2-402 36-422 (431)
30 PRK12308 bifunctional arginino 100.0 7.6E-71 1.6E-75 582.6 35.8 369 2-401 46-439 (614)
31 PRK06390 adenylosuccinate lyas 100.0 1.8E-70 3.9E-75 559.4 33.2 374 2-402 41-431 (451)
32 COG0015 PurB Adenylosuccinate 100.0 4.2E-70 9.1E-75 542.4 33.8 368 2-402 36-428 (438)
33 cd01595 Adenylsuccinate_lyase_ 100.0 7.6E-71 1.6E-75 552.3 28.7 338 2-366 27-375 (381)
34 cd03302 Adenylsuccinate_lyase_ 100.0 2.6E-69 5.6E-74 548.3 36.1 369 5-401 41-436 (436)
35 PRK02186 argininosuccinate lya 100.0 2.2E-69 4.7E-74 593.1 36.3 350 2-380 454-817 (887)
36 cd01360 Adenylsuccinate_lyase_ 100.0 6.6E-69 1.4E-73 538.4 31.8 332 2-366 33-374 (387)
37 PRK06389 argininosuccinate lya 100.0 3.5E-68 7.6E-73 531.9 33.3 334 2-375 48-390 (434)
38 cd01334 Lyase_I Lyase class I 100.0 3.5E-67 7.6E-72 515.9 32.1 307 2-333 17-325 (325)
39 TIGR02426 protocat_pcaB 3-carb 100.0 8.8E-67 1.9E-71 514.0 29.4 301 2-330 37-338 (338)
40 PRK05975 3-carboxy-cis,cis-muc 100.0 2.2E-64 4.8E-69 498.3 30.2 300 2-332 46-347 (351)
41 PRK09285 adenylosuccinate lyas 100.0 2.5E-64 5.5E-69 512.3 28.8 334 50-402 96-448 (456)
42 cd01598 PurB PurB_like adenylo 100.0 1E-62 2.2E-67 495.5 33.5 373 2-400 27-424 (425)
43 PLN02848 adenylosuccinate lyas 100.0 9.8E-61 2.1E-65 485.3 33.4 373 2-402 52-451 (458)
44 PF00206 Lyase_1: Lyase; Inte 100.0 2.3E-61 5E-66 472.0 19.6 267 2-281 41-312 (312)
45 KOG2700 Adenylosuccinate lyase 100.0 4.2E-41 9.2E-46 326.3 21.4 322 72-402 102-450 (481)
46 cd01594 Lyase_I_like Lyase cla 100.0 2.4E-36 5.1E-41 283.1 25.1 184 50-293 16-201 (231)
47 PRK08937 adenylosuccinate lyas 100.0 6.4E-31 1.4E-35 244.3 18.6 178 219-400 22-216 (216)
48 PF10415 FumaraseC_C: Fumarase 98.8 4.2E-09 9E-14 75.9 3.3 55 347-401 1-55 (55)
49 PF10397 ADSL_C: Adenylosuccin 98.0 4.6E-06 9.9E-11 65.3 3.1 54 349-402 11-73 (81)
50 PF14698 ASL_C2: Argininosucci 97.0 0.00029 6.3E-09 53.5 1.7 55 345-400 1-69 (70)
51 PF08328 ASL_C: Adenylosuccina 95.2 0.095 2.1E-06 43.2 7.2 103 295-399 3-115 (115)
52 KOG2700 Adenylosuccinate lyase 92.1 3.5 7.5E-05 41.9 13.2 128 115-285 225-358 (481)
53 PF05924 SAMP: SAMP Motif; In 30.4 16 0.00034 20.6 -0.1 9 257-265 11-19 (20)
54 CHL00180 rbcR LysR transcripti 27.7 2.5E+02 0.0054 26.7 7.7 57 117-174 46-102 (305)
55 KOG4797 Transcriptional regula 20.9 3E+02 0.0064 22.7 5.4 37 80-117 54-90 (123)
No 1
>PRK12425 fumarate hydratase; Provisional
Probab=100.00 E-value=5.6e-96 Score=745.41 Aligned_cols=402 Identities=57% Similarity=0.895 Sum_probs=386.7
Q ss_pred CCCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCc-ccccccccCCCCC
Q 015619 1 MEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQS 78 (403)
Q Consensus 1 ~~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~-~~h~~~~vh~g~S 78 (403)
.+.| ||++++++|.++|++|.++...++|++|++|.+++||+||||||||++++.+++|.++|++ .+||++|||+|||
T Consensus 58 ~~~G~l~~~~~~~I~~al~ei~~~~~~~~f~~~~~~~g~~ed~~mnvnevi~~~~~e~~G~~~g~~~~vhpn~~vh~g~S 137 (464)
T PRK12425 58 DRNGDLPADIARLIEQAADEVLDGQHDDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGNGRGGKSPVHPNDHVNRSQS 137 (464)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHcCcccCCCCccCCCCCCcchHHHHHHHHHHHHHHHHhCcccccccccCchhcccCCCC
Confidence 3689 9999999999999999998888999999999999999999999999999999999878854 3999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 79 SNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 79 ~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
|||+++|+++|++|+.+...+.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++
T Consensus 138 ~ND~~~Ta~~L~~r~~l~~~l~~~L~~l~~~L~~~A~~~~~tim~GrTHlQ~A~PiT~G~~~~a~~~~l~rd~~RL~~~~ 217 (464)
T PRK12425 138 SNDCFPTAMHIAAAQAVHEQLLPAIAELSGGLAEQSARHAKLVKTGRTHMMDATPITFGQELSAFVAQLDYAERAIRAAL 217 (464)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccccccCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999328999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++++.+|+||||+||++++++.|++++.+.+++.|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+
T Consensus 218 ~r~~~~plGggAvGT~~~~~~~~~~~~~~~La~~LG~~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~lls 297 (464)
T PRK12425 218 PAVCELAQGGTAVGTGLNAPHGFAEAIAAELAALSGLPFVTAPNKFAALAGHEPLVSLSGALKTLAVALMKIANDLRLLG 297 (464)
T ss_pred HHHHHhcCCCchhcCcccCCccHHHHHHHHHHHHhCCCCcccccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999989999999999999999877899999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 239 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 239 s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
|+|++|||||++|+.++|||||||||||+.+|.++++|++++|++.+++....+++++.+.+++.+.+.++++++.+.++
T Consensus 298 S~p~~g~~ei~lp~~~~GSSiMPqK~NP~~~E~i~~~a~~v~G~~~~v~~~~~~~~~q~n~~~~~~~~~~l~s~~~l~~~ 377 (464)
T PRK12425 298 SGPRAGLAEVRLPANEPGSSIMPGKVNPTQCEALSMLACQVMGNDATIGFAASQGHLQLNVFKPVIIHNLLQSIRLLADG 377 (464)
T ss_pred cCccCCceEEECCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhhcchHHHHHHHHHHHHHHHH
Confidence 99999999999998899999999999999999999999999999999988888899999888888888999999999999
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccc
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 398 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~ 398 (403)
++.+...|+++|+||++||++|++.+++++|+|++.+||++||++++++.++|++++|++.+.+.++++++++++||.+|
T Consensus 378 ~~~~~~~~i~~l~vn~erm~~~l~~~~~~at~L~~~ig~~~A~~ia~~a~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~ 457 (464)
T PRK12425 378 CRNFQQHCVAGLEPDAEQMAAHLERGLMLVTALNPHIGYDKAAEIAKKAYAEGTTLREAALALGYLTDEQFDAWVRPENM 457 (464)
T ss_pred HHHHHHHHHccCEECHHHHHHHHHcccHHHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHh
Confidence 99998899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC
Q 015619 399 IGPS 402 (403)
Q Consensus 399 vg~~ 402 (403)
+++.
T Consensus 458 ~~~~ 461 (464)
T PRK12425 458 LEAG 461 (464)
T ss_pred cCCC
Confidence 9875
No 2
>PLN00134 fumarate hydratase; Provisional
Probab=100.00 E-value=2.4e-95 Score=740.44 Aligned_cols=401 Identities=88% Similarity=1.270 Sum_probs=385.3
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S~ 79 (403)
+.| ||++++++|.++|++|.++...++|+++++|+|+++++|||||||||+++++++|+++|+|. +||++|||+|+||
T Consensus 53 ~~G~l~~~~a~~I~~al~ei~~~~~~~~f~~~~~~~g~g~~~~~~v~evie~~l~e~~g~~~g~~~~lHp~d~vh~G~S~ 132 (458)
T PLN00134 53 EYGLLDPDIGKAIMQAADEVAEGKLDDHFPLVVWQTGSGTQTNMNANEVIANRAAEILGGPVGEKSPVHPNDHVNRSQSS 132 (458)
T ss_pred HCCCCCHHHHHHHHHHHHHHHcCcccCCccccccccCCcccccCcHHHHHHHHHHHHhCcccCCccccCcccccCCCCCh
Confidence 689 99999999999999999887789999999999999999999999999999999998788653 9999999999999
Q ss_pred hhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 80 NDTFPTVMHIAAAME-TNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~-l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
||+++|+++|++|+. +. .+.+.|.+|+++|.++|++|+||+||||||+|+|||||||||+++|+++|.||++||.+++
T Consensus 133 nDiv~Ta~~L~~~~~~~~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~ 211 (458)
T PLN00134 133 NDTFPTAMHIAAATEIHS-RLIPALKELHESLRAKSFEFKDIVKIGRTHLQDAVPLTLGQEFSGYATQVKYGLNRVQCTL 211 (458)
T ss_pred hhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCeeecHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999966 54 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++++.+||||||+||++++++.++.++++++|++|||+.++.+|++||+++||+++++++++++++++|+|||+||++|+
T Consensus 212 ~~~~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~lls 291 (458)
T PLN00134 212 PRLYELAQGGTAVGTGLNTKKGFDEKIAAAVAEETGLPFVTAPNKFEALAAHDAFVELSGALNTVAVSLMKIANDIRLLG 291 (458)
T ss_pred HHHHHhCCCCeeecCCccCChhHHHHHHHHHHHHhCCCCCCCccHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998899999999999999999999999999876899999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 239 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 239 s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
|+||+|||||.+|+.++|||||||||||+.+|.++++|+++.|++.++++..++++++.+.++|++.|.++++++.+.++
T Consensus 292 s~p~~e~gev~lp~~~~GSSiMP~KrNPv~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~ 371 (458)
T PLN00134 292 SGPRCGLGELNLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSAGHFELNVFKPLIAYNLLHSIRLLGDA 371 (458)
T ss_pred ccccCCcceEECCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhccchHHHHHHHHHHHHHHHH
Confidence 99999999999998889999999999999999999999999999999987778889998877888889999999999999
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccc
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 398 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~ 398 (403)
+..+...|+++|+||++||++|++.+++++++|++.+||++|+++++++.++|++++|++.+.+.++++|+++++||.+|
T Consensus 372 ~~~~~~~~l~~l~vn~erm~~~l~~~~~l~~~La~~ig~~~A~~~~~~a~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~ 451 (458)
T PLN00134 372 SASFRKNCVRGIEANRERISKLLHESLMLVTALNPKIGYDKAAAVAKKAHKEGTTLKEAALKLGVLTAEEFDELVVPEKM 451 (458)
T ss_pred HHHHHHHHHccCEECHHHHHHHHHhccchHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHh
Confidence 99998899999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred cCCCC
Q 015619 399 IGPSD 403 (403)
Q Consensus 399 vg~~~ 403 (403)
+|+.+
T Consensus 452 ~~~~~ 456 (458)
T PLN00134 452 TGPSD 456 (458)
T ss_pred cCCCC
Confidence 99864
No 3
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=100.00 E-value=9e-93 Score=724.54 Aligned_cols=400 Identities=70% Similarity=1.051 Sum_probs=381.2
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCc-ccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~-~~h~~~~vh~g~S~ 79 (403)
++| ||++++++|.++|+++.++...+.|+.++.+++.++++|++||++|++++.+..|+++|.+ ++|+++|||+||||
T Consensus 61 ~~Giip~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~~h~~~~vh~G~Sr 140 (464)
T PRK00485 61 ELGLLDAEKADAIVAAADEVIAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSS 140 (464)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhCccccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCccCccccCCCCCCc
Confidence 689 9999999999999999765456889999999999999999999999998887777555433 59999999999999
Q ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 80 NDTFPTVMHIAAAMET-NSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l-~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
|||++|+++|++|+.+ . .+.+.|.+|+++|.++|++|+||+||||||+|+|||||||||+++|+++|.||++||.+++
T Consensus 141 nD~v~Ta~~L~lr~~l~~-~l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~PiTfG~~~~~~~~~l~R~~~RL~~~~ 219 (464)
T PRK00485 141 NDTFPTAMHIAAVLAIVE-RLLPALEHLRDTLAAKAEEFADIVKIGRTHLQDATPLTLGQEFSGYAAQLEHGIERIEAAL 219 (464)
T ss_pred hhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCeeeeeecCcCceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 6 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++++.+||||||+||+++++++++.++++++|++|||+.++++|++||+++||+++++++++++++++|+|||+||++|+
T Consensus 220 ~r~~~~pLGg~AvGT~~~~~~~~~~~v~~~~A~~LGl~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~ria~Dl~l~s 299 (464)
T PRK00485 220 PHLYELALGGTAVGTGLNAHPGFAERVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLA 299 (464)
T ss_pred HHHHHhccCCccccCCccCChhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999998899999999998999999999999999657899999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 239 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 239 s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
|+|++|||||.+|++++|||||||||||+++|.++++|+++.|++.+++....++++|++...|...|.++++++.+.++
T Consensus 300 s~~~~e~gev~lp~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~ 379 (464)
T PRK00485 300 SGPRCGLGEISLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNDAAVTFAGSQGNFELNVFKPVIAYNFLQSIRLLADA 379 (464)
T ss_pred CCccCCCceEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHhccCcccccccChHHHHHHHHHHHHHHHH
Confidence 99999999999999889999999999999999999999999999999987889999999988888899999999999999
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccc
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 398 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~ 398 (403)
+..++..++++|+||++||++|+..+++++++|++.+||+.|+++++++.++|.+|++++.+.+.++++++++++||.+|
T Consensus 380 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~t~La~~lg~~~A~~~~~~a~~~g~~l~~~~~~~~~l~~~~l~~~ldP~~~ 459 (464)
T PRK00485 380 MRSFADHCVVGIEPNRERIKELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGLTLKEAALELGYLTEEEFDRWVDPEKM 459 (464)
T ss_pred HHHHHHHHHccCEECHHHHHHHHHhCCeeHHHhccccCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCHHHh
Confidence 99998799999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred cCCC
Q 015619 399 IGPS 402 (403)
Q Consensus 399 vg~~ 402 (403)
+|+.
T Consensus 460 ~~~~ 463 (464)
T PRK00485 460 TGPG 463 (464)
T ss_pred cCCC
Confidence 9984
No 4
>PRK14515 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=2.2e-92 Score=719.33 Aligned_cols=399 Identities=42% Similarity=0.708 Sum_probs=383.4
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S~ 79 (403)
+.| |+++++++|.++|++|.++...++|++|++++|++|+.|||||||||+++++++|.+.|+|. +||+||||+||||
T Consensus 68 ~~G~l~~~~~~~I~~al~ei~~~~~~~~f~~~~~~~g~~t~~nmnvnevie~~~~~~~G~~~g~~~~~hpnd~vn~grS~ 147 (479)
T PRK14515 68 DVGRLELNKGGAIAEAAQEILDGKWHDHFIVDPIQGGAGTSMNMNANEVIANRALELLGMEKGDYHYISPNSHVNMAQST 147 (479)
T ss_pred HCCCCCHHHHHHHHHHHHHHHcCcccCCCCCCcccCCCcccccchHHHHHHHHHHHHhCcccCCccccCccccCCCCCCc
Confidence 689 99999999999999999988889999999999999999999999999999999998778765 8999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.++++
T Consensus 148 ND~v~Ta~~L~~~~~l~-~l~~~L~~L~~~L~~~A~~~~~~vm~GrTHlQ~A~PiT~G~~~~~~a~~l~r~~~RL~~~~~ 226 (479)
T PRK14515 148 NDAFPTAIHIATLNALE-GLLQTMGYMHDVFELKAEQFDHVIKMGRTHLQDAVPIRLGQEFKAYSRVLERDMKRIQQSRQ 226 (479)
T ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccchhccccceeeeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+||||||+||++++++++..++...+++.+|++.++.+|.+|++++||+++++++++++++++|+|||+||++|+|
T Consensus 227 ~l~~~pLG~gAvGT~~~~~~~~~~~~l~~la~~~gl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~kiA~Dl~llsS 306 (479)
T PRK14515 227 HLYEVNMGATAVGTGLNADPEYIEAVVKHLAAISELPLVGAEDLVDATQNTDAYTEVSAALKVCMMNMSKIANDLRLMAS 306 (479)
T ss_pred HHhhccCCCccccCCCCCChhHHHHHHHHHHHHhCCCCCCCcchHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999889999999999999999999999999987777899999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+|++|||||.+|++++|||||||||||+.+|.++++|+++.|++.++++...+++++++.+.|.+.+.++.+++.+.+++
T Consensus 307 ~p~~g~~Ei~lp~~~~GSSiMP~KrNP~~~E~i~~~a~~v~G~~~~~~~~~~~~~le~n~~~p~i~~~l~~si~~l~~al 386 (479)
T PRK14515 307 GPRVGLAEIMLPARQPGSSIMPGKVNPVMPEVINQIAFQVIGNDHTICLASEAGQLELNVMEPVLVFNLLQSISIMNNGF 386 (479)
T ss_pred CCcCCeeEEeCCCCCCCcCCCCcccCchHHHHHHHHHHHHHhHHHHHHHHHhcccHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 99999999999998999999999999999999999999999999999887778889988877877788999999999999
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCccccc
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 399 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~v 399 (403)
..+..+|+++|+||++||++|++.+++++++|++.+||+.+++++++|.++|.+|+|++.+.+.++++|+++++||.+++
T Consensus 387 ~~~~~~~l~gl~vn~erm~~~l~~s~~l~t~La~~iG~~~v~~~a~~A~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~ 466 (479)
T PRK14515 387 RAFTDNCLKGIEANEDRLKEYVEKSVGIITAVNPHIGYEAAARVAKEAIATGQSVRELCVKNGVLSQEDLELILDPFEMT 466 (479)
T ss_pred HHHHHHHHccCEECHHHHHHHHHhCccHHHHhcchhcHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHhCCHHHcC
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 015619 400 GP 401 (403)
Q Consensus 400 g~ 401 (403)
++
T Consensus 467 ~~ 468 (479)
T PRK14515 467 HP 468 (479)
T ss_pred CC
Confidence 86
No 5
>TIGR00979 fumC_II fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.
Probab=100.00 E-value=7.6e-92 Score=714.79 Aligned_cols=399 Identities=70% Similarity=1.078 Sum_probs=380.5
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCc-ccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~-~~h~~~~vh~g~S~ 79 (403)
++| ||++++++|.++|+++.++...++|+.++.+++.++++|||+|+||++++.+++|++.|++ ++||++|||||+||
T Consensus 58 ~~Giip~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~~~via~~l~e~~g~~~g~~~~vH~~d~vn~G~S~ 137 (458)
T TIGR00979 58 DLGKLDAKKADAIVQAADEILAGKLDDHFPLVVWQTGSGTQSNMNVNEVIANRAIELLGGKLGSKQPVHPNDHVNKSQSS 137 (458)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhccccCCCceecccccccccccccHHHHHHHHHHHHcCcccCCCceeCCCCCCCCCCCc
Confidence 689 9999999999999999876666889999999999999999999999999999999777643 39999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+...+.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.++++
T Consensus 138 nDiv~Ta~~L~lr~~l~~~l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~ 217 (458)
T TIGR00979 138 NDTFPTAMHIAAVLAIKNQLIPALENLKKTLDAKSKEFAHIVKIGRTHLQDATPLTLGQEFSGYVAQLEHGLERIAYSLP 217 (458)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeecccccccceeeeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999993289999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+||||+|+||+++++++++.++++++++.|||+.++++|++|++++||++++++++++.++++|+|||+||++|+|
T Consensus 218 ~~~~~~lGg~AvGT~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~~~~~~rD~~~e~~~~La~la~~L~kia~Dl~llss 297 (458)
T TIGR00979 218 HLYELAIGGTAVGTGLNTHPGFDEKVAEEIAKETGLPFVTAPNKFEALAAHDAIVEAHGALKTLAASLMKIANDIRWLGS 297 (458)
T ss_pred HHHHhcCCCChhcCCccCChhHHHHHHHHHHHHhCCCCeecCcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999988999999999888999999999999998778999999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+||+|||||++|++++|||||||||||+.+|.++++|+++.|++.+++.....++++.+.++|.+.|.++++++.+.+++
T Consensus 298 ~~~~e~gev~~p~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 377 (458)
T TIGR00979 298 GPRCGLGELFIPENEPGSSIMPGKVNPTQCEALTMVCVQVMGNDATIGFAGSQGNFELNVFKPVIIYNFLQSVRLLSDAM 377 (458)
T ss_pred cccCCceeEECCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHhhHHHHHHHHHhccchhhhcchHHHHHHHHHHHHHHHHH
Confidence 99999999999998999999999999999999999999999999999887778888888888888899999999999999
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCccccc
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 399 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~v 399 (403)
..+...|+++|+||+|||++|+..+++++++|++.+||++|+++++++.++|.+|+|++.+.+.++++++++++||.+|+
T Consensus 378 ~~~~~~~l~~L~v~~erm~~nl~~~~~~~t~La~~lg~~~A~~~~~~a~~~~~~~~e~~~~~~~l~~~el~~~ldp~~~~ 457 (458)
T TIGR00979 378 ESFRDHCVVGIEPNKERIQQLLNNSLMLVTALNPHIGYDNAAKIAKKAHKEGITLKEAALELGLLSEEEFDEWVVPEQMV 457 (458)
T ss_pred HHHHHHHHccCEECHHHHHHHHHcCccHHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHcCHHHhc
Confidence 99987899999999999999999999999999999999999999999999999999999998899999999999999998
Q ss_pred C
Q 015619 400 G 400 (403)
Q Consensus 400 g 400 (403)
|
T Consensus 458 ~ 458 (458)
T TIGR00979 458 G 458 (458)
T ss_pred C
Confidence 6
No 6
>PRK13353 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=1.8e-90 Score=707.88 Aligned_cols=399 Identities=47% Similarity=0.743 Sum_probs=378.7
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S~ 79 (403)
+.| ||++++++|.++|+++.++...++|++++.++++++++|||+|++|++++.+++|++.|+|. +||++|||+||||
T Consensus 62 ~~Glip~~~a~~I~~al~~i~~~~~~d~f~~~~~~~~~~~~~~~n~~~vi~~~l~e~~g~~~g~~~~~hp~d~vH~GrSr 141 (473)
T PRK13353 62 DLGLLPRRIAEAIVQACDEILAGKLHDQFIVDPIQGGAGTSTNMNANEVIANRALELLGGEKGDYHYVSPNDHVNMAQST 141 (473)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhccccCCCCcchhhccccchhcchhhHHHHHHHHHHhCccccCCccCCcccCccCCCCh
Confidence 689 99999999999999998766568899999999999999999999999999999997777653 9999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+. .+.+.|.+|+++|.++|++|++++||||||+|+|||||||||+++|+++|.||++||.++++
T Consensus 142 nD~v~Ta~~L~~r~~l~-~l~~~L~~l~~~L~~~A~~~~~~im~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 220 (473)
T PRK13353 142 NDVFPTAIRIAALNLLE-GLLAAMGALQDVFEEKAAEFDHVIKMGRTQLQDAVPITLGQEFSAYARALKRDRKRIQQARE 220 (473)
T ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+||||||+||+++++++++.++.++++++|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|
T Consensus 221 ~~~~~pLGg~AvGT~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~la~la~~l~riA~Dl~llss 300 (473)
T PRK13353 221 HLYEVNLGGTAVGTGLNADPEYIERVVKHLAAITGLPLVGAEDLVDATQNTDAFVEVSGALKVCAVNLSKIANDLRLLSS 300 (473)
T ss_pred HHhhhCCCCccccCCccCChhHHHHHHHHHHHHhCCCCccccchHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999988999999999998999999999999997667899999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+||+|||||.+|+.++|||||||||||+.+|.++++|+++.|++++++....+.+++.+...|.....++++++.+.+++
T Consensus 301 ~pr~e~gev~lp~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (473)
T PRK13353 301 GPRTGLGEINLPAVQPGSSIMPGKVNPVMPEVVNQIAFQVIGNDVTITLAAEAGQLELNVMEPVIAFNLLESISILTNAC 380 (473)
T ss_pred CCcCCceEEECCCCCCCCCCCCCCcCChHHHHHHHHHHHHHhHHHHHHHHHHcCChhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999998899999999999999999999999999999999877777777777777776778888999988899
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCccccc
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 399 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~v 399 (403)
..+...++++|+||++||++|+..+++++++|++.+||+.+.++++.+.++|++|++++.+++.++++++++++||.+|+
T Consensus 381 ~~~~~~~l~gL~vn~erm~~~l~~~~~l~t~La~~Lgh~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~el~~~ldp~~~v 460 (473)
T PRK13353 381 RAFTDNCVKGIEANEERCKEYVEKSVGIATALNPHIGYEAAARIAKEAIATGRSVRELALENGLLSEEELDLILDPFRMT 460 (473)
T ss_pred HHHHHHHHccCEECHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCCHHHHHHHcCHHHhc
Confidence 99987899999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred CC
Q 015619 400 GP 401 (403)
Q Consensus 400 g~ 401 (403)
++
T Consensus 461 ~~ 462 (473)
T PRK13353 461 HP 462 (473)
T ss_pred CC
Confidence 75
No 7
>PRK12273 aspA aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=6.9e-90 Score=703.46 Aligned_cols=399 Identities=47% Similarity=0.751 Sum_probs=372.8
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCc-ccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~-~~h~~~~vh~g~S~ 79 (403)
++| ||++++++|.++|+++.++...+.|++++.+++++++.|++||++|+.++++++|.+.|+| ++||++|||+||||
T Consensus 64 ~~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~e~~~~~v~~~i~~~~~e~~g~~~~~~~~vHp~d~v~~GrSr 143 (472)
T PRK12273 64 ELGLLDEEKADAIVAACDEILAGKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQST 143 (472)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhccccCCcccchhhccccchhhhHHHHHHHHHHHHHhCcccCCcceeCCCCCCCCCCCc
Confidence 689 9999999999999999876556779999999999999999999999998889998666655 49999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
|||++|+++|++|+.+. .+.+.|.+|+++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.++++
T Consensus 144 nD~v~Ta~~L~lr~~l~-~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~AqP~TfG~~~a~~~~~l~r~~~RL~~~~~ 222 (472)
T PRK12273 144 NDAYPTAIRIALLLSLR-KLLDALEQLQEAFEAKAKEFADILKMGRTQLQDAVPMTLGQEFGAYAVALAEDRKRLYRAAE 222 (472)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCEEeecccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+||||||+||+++++++++.++++++|++|||+.++++|++|++++||+++++++++++++++|+|||+||++|+|
T Consensus 223 ~~~~~plGg~AvGT~~~i~~~~~~~v~~~~A~~LGf~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~rlA~Di~llss 302 (472)
T PRK12273 223 LLREVNLGATAIGTGLNAPPGYIELVVEKLAEITGLPLVPAEDLIEATQDTGAFVEVSGALKRLAVKLSKICNDLRLLSS 302 (472)
T ss_pred HHhhcCCCccceeCCCCCChhHHHHHHHHHHHHcCCCcccCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999988999999999888899999999999997567899999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+||+|||||.+|++++|||||||||||+.+|.+|++|+++.|++++++....+.+++.+...+.....+|+++..+..++
T Consensus 303 ~e~~e~gev~lp~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 382 (472)
T PRK12273 303 GPRAGLNEINLPAVQAGSSIMPGKVNPVIPEVVNQVCFQVIGNDTTVTMAAEAGQLELNVMEPVIAYNLFESISILTNAC 382 (472)
T ss_pred CcccCceEEECCCCCCcCCCCCcccCcHHHHHHHHHHHHHhhhHHHHHHHHHcCCchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999988899999999999999999999999999999999766666666665555666677888899998888
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCccccc
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 399 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~v 399 (403)
..+...++++|+||++||++|+..+++++|+||+.+||+.|+++++.+.++|++|++++.+++.++++++++++||++|+
T Consensus 383 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~t~LA~~L~~~~a~~lv~~a~~~g~~l~~~~~~~~~l~~~el~~~ldp~~~v 462 (472)
T PRK12273 383 RTLREKCIDGITANEERCREYVENSIGIVTALNPYIGYENAAEIAKEALETGKSVRELVLERGLLTEEELDDILSPENMT 462 (472)
T ss_pred HHHHHHHHccCEECHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCCHHHHHHHcCHHHhC
Confidence 88853599999999999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred CC
Q 015619 400 GP 401 (403)
Q Consensus 400 g~ 401 (403)
++
T Consensus 463 ~~ 464 (472)
T PRK12273 463 HP 464 (472)
T ss_pred CC
Confidence 87
No 8
>COG0114 FumC Fumarase [Energy production and conversion]
Probab=100.00 E-value=5.1e-89 Score=651.87 Aligned_cols=401 Identities=69% Similarity=1.042 Sum_probs=393.9
Q ss_pred CCCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCC
Q 015619 1 MEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQS 78 (403)
Q Consensus 1 ~~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S 78 (403)
+++| +|++.+++|.++|++|.++.+.++||++.+|.|+||..|||+||||.+++++.+|++.|.+. +||+||||+|+|
T Consensus 59 ~~LG~L~~~~a~aI~~Aadev~~Gk~d~~FPl~VwQTGSGTqsNMN~NEVIanrA~e~~gg~~g~~~~VHPNDhVN~sQS 138 (462)
T COG0114 59 ADLGLLDPEKADAIIAAADEVLAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQS 138 (462)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHcCcccCCCCeEEEecCCCccccccHHHHHHHHHHHHhCcccCCCCCCCCCCcCCcccc
Confidence 3689 99999999999999999999999999999999999999999999999999999999888654 999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 79 SNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 79 ~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
|||.++||+++....++..+|+..|..|+++|.+||++|.+++.+||||+|+|.|+|||+.|++|..+|.+..+|++...
T Consensus 139 SNDtfPTAmhIAa~~~v~~~LiPaL~~L~~~L~~Ka~~~~~iVKiGRTHLqDAtPlTlGQE~sGy~~ql~~~~~~i~~~l 218 (462)
T COG0114 139 SNDTFPTAMHIAAVLAVVNRLIPALKHLIKTLAAKAEEFADVVKIGRTHLQDATPLTLGQEFSGYAAQLEHALERIEASL 218 (462)
T ss_pred cCcchhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhcCcccccccCcchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
+.+...++||+|||||.+..++|+..+.+.++++.|++..+.+|.|.+.+++|.++++.++|..++..|-|||+||+++.
T Consensus 219 ~~l~eLAiGGTAVGTGlNa~p~f~ekva~~i~~~TG~~F~~a~NkF~al~~hd~lv~~~Gal~~lA~~L~KIAnDiR~l~ 298 (462)
T COG0114 219 PHLYELAIGGTAVGTGLNAHPEFGEKVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALRTLAVSLMKIANDIRWLG 298 (462)
T ss_pred HHHHHHccCCcccccCcCCCccHHHHHHHHHHHHhCCCcccCCcHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 239 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 239 s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
|+||+++||+.+|+.++||||||.|+||+.+|.+...|.+|+|+++++..+++.++||+|+++|++.|++++++.++.++
T Consensus 299 SGPr~GLgEi~lPenePGSSIMPGKVNPtq~EA~tmv~~QV~Gnd~ai~~ags~GnFELNv~~Pvi~~N~LqS~~LLada 378 (462)
T COG0114 299 SGPRCGLGEIELPENEPGSSIMPGKVNPTQCEALTMVAAQVIGNDAAIAFAGSQGNFELNVFKPVIAYNFLQSVRLLADA 378 (462)
T ss_pred cCCCCCccccccCCCCCCccCCCCCCCchhHHHHHHHHHHHHcchHHHHHhhccCceeeccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccc
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 398 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~ 398 (403)
+..|.+.|+.||++|++||+++++.+.+++|+|++.|||++|.++++.|.++|++++|++.+.++++++|+++++||++.
T Consensus 379 ~~~f~~~ci~gie~n~~~i~~~l~~SlmLVTaLnp~IGYdkAa~IAK~A~keg~tlreaa~~~G~lte~efd~~v~Pe~m 458 (462)
T COG0114 379 MRSFADHCIVGIEPNEERIKELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGTTLREAALELGLLSEEEFDKLVDPEKM 458 (462)
T ss_pred HHHHHHHHhhccccCHHHHHHHHhhCchHHHhcccccchHHHHHHHHHHHHCCCcHHHHHHHcCCCCHHHHHHhcCHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC
Q 015619 399 IGP 401 (403)
Q Consensus 399 vg~ 401 (403)
+++
T Consensus 459 v~~ 461 (462)
T COG0114 459 VGP 461 (462)
T ss_pred cCC
Confidence 986
No 9
>cd01357 Aspartase Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.
Probab=100.00 E-value=1.3e-87 Score=683.64 Aligned_cols=392 Identities=48% Similarity=0.763 Sum_probs=365.6
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCc-ccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~-~~h~~~~vh~g~S~ 79 (403)
+.| ||++++++|.++|+++.++...++|++++.++++++++|+++|++|+.++++++|++.|+| .+||+++||+||||
T Consensus 57 ~~Giip~~~a~~I~~al~~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~vi~~~~~e~~g~~~g~~~~~h~~~~vH~GrSr 136 (450)
T cd01357 57 ELGLLDEEKAEAIVKACDEIIAGKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQST 136 (450)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhccccCCCccchhhccccchhhhhHhHHHHHHHHHHhCccccCCcccCCcccccCCCCh
Confidence 689 9999999999999999865545789999999999999999999999999889998666754 39999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+. .+.+.|..++++|.++|++|++|+||||||+|+|||||||||+++|+++|.|+++||.++++
T Consensus 137 nD~v~Ta~~L~lr~~l~-~l~~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~ 215 (450)
T cd01357 137 NDVYPTALRLALILLLR-KLLDALAALQEAFQAKAREFADVLKMGRTQLQDAVPMTLGQEFGAYATALKRDRARIYKARE 215 (450)
T ss_pred HhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCEeeccccCcccccchHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+||||||+||+++++++++.++++++|++|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|
T Consensus 216 ~~~~~pLGg~AvGt~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~riA~Di~l~ss 295 (450)
T cd01357 216 RLREVNLGGTAIGTGINAPPGYIELVVEKLSEITGLPLKRAENLIDATQNTDAFVEVSGALKRLAVKLSKIANDLRLLSS 295 (450)
T ss_pred HHHHhCCCCCceeCCCCCChhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999988999999999888999999999999997567899999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+||+|||||.+|.+++|||||||||||+.+|.++++|+++.|+..++++...+.+++.+...|.....++.+++.+.+++
T Consensus 296 ~e~~~~gev~~p~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 375 (450)
T cd01357 296 GPRAGLGEINLPAVQPGSSIMPGKVNPVIPEVVNQVAFQVIGNDLTITMAAEAGQLELNVFEPVIAYNLLESIDILTNAV 375 (450)
T ss_pred CCcCCceeEECCCCCCcCCCCCCCcCcHHHHHHHHHHHHHhhHHHHHHHHHhcCcchhhcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999977899999999999999999999999999999888665566666666566666677888888888888
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCC
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVV 394 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ld 394 (403)
..+...++++|+||++||++|+..+++++++|++.+||+.|+++++.+.++|++|++++.+++.++++||++++|
T Consensus 376 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~t~La~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~el~~~~~ 450 (450)
T cd01357 376 RTLRERCIDGITANEERCREYVENSIGIVTALNPYIGYEAAAEIAKEALETGRSVRELVLEEGLLTEEELDEILS 450 (450)
T ss_pred HHHHHHHHccCEECHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHhC
Confidence 888558999999999999999999999999999999999999999999999999999999889999999999886
No 10
>TIGR00839 aspA aspartate ammonia-lyase. Fumarate hydratase scores as high as 570 bits against this model.
Probab=100.00 E-value=8e-87 Score=678.24 Aligned_cols=399 Identities=41% Similarity=0.682 Sum_probs=371.2
Q ss_pred CCC-CCHHHHHHHHHHHHHHHc-cccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQS 78 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S 78 (403)
++| ||++++++|.++|+++.+ +...+.|++++.+++.||++|+++|+|||..+.+.+|.+.|+|. .||++|||.|+|
T Consensus 59 e~GiIp~~~a~~I~~al~~~~d~~~~~~~~~l~~~~~~~g~~~~~~v~~vie~~l~e~~g~~~g~~~H~~p~~~v~~G~S 138 (468)
T TIGR00839 59 ELGTIPESIANAIVAACDEILNNGKCHDQFPVDVYQGGAGTSVNMNTNEVIANLALELMGHQKGEYQYLNPNDHVNKSQS 138 (468)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhcccccccccccHHHccCccccccchHHHHHHHHHHHhCccccCeeecCCCCCCCCCCC
Confidence 689 999999999999998764 23345788999999999999999999999999999996678653 579999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 79 SNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 79 ~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
|||+++|+++|++|+.+. .+.+.|..|+++|.++|++|++|+||||||+|+|||||||||+++|+++|.|+++||.+++
T Consensus 139 ~nD~v~Ta~~L~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~ 217 (468)
T TIGR00839 139 TNDAYPTGFRIAVYSSLI-KLVDAINQLRDGFEQKAKEFADILKMGRTQLQDAVPMTLGQEFEAFSILLEEEVKNIKRTA 217 (468)
T ss_pred hhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCeeeccccCccCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++++.+||||||+||+++++++++.++++++|++|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+
T Consensus 218 ~~~~~~~lGg~AvGT~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~~ 297 (468)
T TIGR00839 218 ELLLEVNLGATAIGTGLNTPPEYSPLVVKKLAEVTGLPCVPAENLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLS 297 (468)
T ss_pred HHhhhcCCCCcceeCCCcCChhHHHHHHHHHHHHhCCCCCCCccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998899999999988899999999999999876789999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 239 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 239 s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
|+|++|||||++|.+++|||||||||||+.+|.++++++++.|++.++++...+.+++.+...|.....+|++++.+.++
T Consensus 298 s~~~~~~~ev~~~~~~~gSS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 377 (468)
T TIGR00839 298 SGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTLAAEAGQLQLNVMEPVIGQAMFESIHILTNA 377 (468)
T ss_pred cCCcCCceEEeCCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhHHHHHHHHHhcCChHhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999997789999999999999999999999999999999866556666665555555556678888999999
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccc
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 398 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~ 398 (403)
+..++..++++|+||++||++|+..+.+++++|++.+||+.|+++++.+.++|+++++++.+++.++++++++++||++|
T Consensus 378 ~~~~~~~~l~~L~vn~erm~~~l~~~~~~~~~La~~~g~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldP~~~ 457 (468)
T TIGR00839 378 CYNLTDKCVNGITANKEICEGYVFNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLEKGLLTEEELDDIFSVENL 457 (468)
T ss_pred HHHHHHHHHccCEECHHHHHHHHHHhHHHHHHHhhHhhHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHH
Confidence 99877889999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred cCC
Q 015619 399 IGP 401 (403)
Q Consensus 399 vg~ 401 (403)
+++
T Consensus 458 v~~ 460 (468)
T TIGR00839 458 MHP 460 (468)
T ss_pred cCC
Confidence 986
No 11
>cd01362 Fumarase_classII Class II fumarases. This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=1.4e-86 Score=676.24 Aligned_cols=396 Identities=72% Similarity=1.060 Sum_probs=371.9
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S~ 79 (403)
+.| ||++++++|.++|+++.+....+.|+.++.+++..+++|++||++|++.+.+..|+++|+++ +|+++|||+|+||
T Consensus 57 ~~GiIp~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~~~~~~~vH~G~Sr 136 (455)
T cd01362 57 ELGLLDEEKADAIVQAADEVIAGKLDDHFPLVVWQTGSGTQTNMNVNEVIANRAIELLGGVLGSKKPVHPNDHVNMSQSS 136 (455)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhcccccCCceehhhccccccccccHHHHHHHHHHHhcCcccCCcCcCCccccccCCCCc
Confidence 689 99999999999999997654467899999999999999999999999888887787788643 8999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+...+.+.|.+++++|.++|++|++|+||||||+|+|||||||||+++|+++|.|+++||.++++
T Consensus 137 nDiv~Ta~~L~lr~~l~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~ 216 (455)
T cd01362 137 NDTFPTAMHIAAALALQERLLPALKHLIDALDAKADEFKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAIARIEAALP 216 (455)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCCCCeeecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999995359999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+||||||+||++++++.++.++++++|++|||+.++++|++||+++||+++++++++++++++|+|||+||++|+|
T Consensus 217 r~~~~~lGg~A~Gt~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~l~ria~Dl~~~~s 296 (455)
T cd01362 217 RLYELALGGTAVGTGLNAHPGFAEKVAAELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLGS 296 (455)
T ss_pred HhhhcCcCCeeccCCccCChhHHHHHHHHHHHHhCCCCccCCCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999978999999999888999999999999997678999999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+||+|||||.+|++++|||||||||||+.+|.++++++++.|.+.+++.....++++.+.+.+...|.++++++.+.+++
T Consensus 297 ~~~~e~gev~~~~~~~GSS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 376 (455)
T cd01362 297 GPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNDAAITIAGSSGNFELNVFKPVIIYNLLQSIRLLADAC 376 (455)
T ss_pred CccCCCceEECCCCCCCCCCCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHHhcCchhhhhcchHHHHHHHHHHHHHHHHH
Confidence 98999999999998899999999999999999999999999999999877777777776666656688999999999999
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCccc
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEK 397 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~ 397 (403)
..++..++++|+||++||++|+..+++++++||+.+||++|+++++++.++|.+|++++.+++.++++|+++++||.+
T Consensus 377 ~~~~~~~l~~L~v~~~rm~~~l~~~~~~~~~La~~ig~~~A~~l~~~a~~~~~~l~~~~~~~~~~~~~el~~~~dp~~ 454 (455)
T cd01362 377 RSFADKCVAGIEPNRERIAELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGLTLKEAALELGYLTEEEFDRLVDPEK 454 (455)
T ss_pred HHHHHHHHccCEECHHHHHHHHHhcchhHHHhccccCHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHHHhcCccc
Confidence 999879999999999999999999999999999999999999999999999999999998889999999999999986
No 12
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-86 Score=629.62 Aligned_cols=400 Identities=47% Similarity=0.753 Sum_probs=392.9
Q ss_pred CCCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCC
Q 015619 1 MEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQS 78 (403)
Q Consensus 1 ~~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S 78 (403)
.|+| ||++.+++|.+||++|..+...++|++|++|+|+||++|||.||||+|++.|++|.+.|.|. +||.+|||+++|
T Consensus 62 ~elg~l~~~~~~aIv~ACDeil~Gk~~dqFvvD~~QGGAGTS~NMN~NEVIAN~AlE~lG~~KGeY~~~hPndhVNmsQS 141 (471)
T COG1027 62 KELGALPKEIADAIVKACDEILDGKCHDQFVVDVYQGGAGTSTNMNANEVIANRALELLGHEKGEYQYLHPNDHVNMSQS 141 (471)
T ss_pred hhhCCCCHHHHHHHHHHHHHHHcCccccccceeccccCCCccccccHHHHHHHHHHHHhcCCCCceeeeCCccccchhhc
Confidence 3789 99999999999999999999999999999999999999999999999999999999999985 999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 79 SNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 79 ~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
+||..+|++|+.+...+. .|.+.+..|++++..|+++|++++++||||+|+|.|||+|+.|.+|+..|.||++||.++.
T Consensus 142 TND~yPTa~ria~~~~l~-~L~~al~~L~~af~~Ka~EF~~ilKmGRTqLQDAvPmtlGqEF~Afa~~l~ed~~ri~~~~ 220 (471)
T COG1027 142 TNDAYPTAFRIAVYKSLR-KLIDALEDLIEAFERKAKEFADILKMGRTQLQDAVPMTLGQEFGAFAVALKEDIKRIYRAA 220 (471)
T ss_pred ccccchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhcChhhhcccccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
+++..+.|||+|+||+.+.+++|...+.+++++.+|++..+..|.++++.+-|.++++++++..++..|+|||+||++++
T Consensus 221 ~~l~evNlGgTAiGTGiNa~~~Y~~~vv~~l~evtg~~~~~A~~Lieatq~~~afv~vsg~lk~~Av~LsKI~NDlRLLs 300 (471)
T COG1027 221 ELLLEVNLGGTAIGTGINAPKGYIELVVKKLAEVTGLPLVPAENLIEATQDTGAFVMVSGALKRLAVKLSKICNDLRLLS 300 (471)
T ss_pred HHHHhhcCCceeeccCcCCChhHHHHHHHHHHHHhCCCCccchhHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 239 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 239 s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
|+||++++|+.+|+.|.||||||.|.||+++|.+.+.|.+|+|++.++.+++..+++|+|.+.|.+.+.++.|+.++..+
T Consensus 301 SGPr~Gl~EI~LP~~Q~GSSIMPgKVNPVipEvvnQvcf~ViGnD~tit~AaeaGQLqLNvmePvI~~~l~~Si~iL~na 380 (471)
T COG1027 301 SGPRAGLNEINLPAVQAGSSIMPGKVNPVIPEVVNQVCFKVIGNDTTITMAAEAGQLQLNVMEPVIAYALFESISILTNA 380 (471)
T ss_pred cCCccCcccccCCCCCCCCCCCCCCcCchhHHHHHHHHHHHhcchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccc
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 398 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~ 398 (403)
+..+.++|++||++|+|+|++++..|.+++|.|.+++||+.+.++++.|.+.|++.+|++++.+.+++++++++|+|.+.
T Consensus 381 ~~~l~ekcI~gItaN~e~C~~~v~nSigivTaLnp~iGy~~~~~iaK~a~~tgksv~evvLe~g~Lteeel~~Il~~~~m 460 (471)
T COG1027 381 CRNLREKCIDGITANEERCEEYVENSIGIVTALNPYIGYENAAIIAKEALETGKSVREVVLERGLLTEEELDDILSPENM 460 (471)
T ss_pred HHHHHHHHhhhcccCHHHHHHHHHhhhHHHHhhcccccchHHHHHHHHHHHcCCcHHHHHHHhCCCCHHHHHHHhChhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCC
Q 015619 399 IGP 401 (403)
Q Consensus 399 vg~ 401 (403)
..+
T Consensus 461 ~~p 463 (471)
T COG1027 461 TKP 463 (471)
T ss_pred CCc
Confidence 765
No 13
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=4.2e-85 Score=664.02 Aligned_cols=392 Identities=60% Similarity=0.894 Sum_probs=369.6
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCccccccccc-CCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHV-NRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~v-h~g~S~ 79 (403)
+.| ||++++++|.++|+++.++...+.|+.++.+++..+++|++||++|+.++.+.+|...|+|.+|+.+|| |+|+||
T Consensus 57 ~~Giip~~~a~~I~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~h~~~~v~h~g~Sr 136 (450)
T cd01596 57 ELGLLDEEKADAIVQACDEVIAGKLDDQFPLDVWQTGSGTSTNMNVNEVIANRALELLGGKKGKYPVHPNDDVNNSQSSN 136 (450)
T ss_pred HCCCCCHHHHHHHHHHHHHHHcCcccCCCcccHHhccCcccccchHHHHHHHHHHHHhccccCCcccCCCcccCCCCCCc
Confidence 689 999999999999999986555678999998888899999999999998887888855565458999998 799999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
|||++|+++|++|+.+. .+.+.|.+|+++|.++|++|++++||||||+|+|||||||||+++|+++|.|+++||..+++
T Consensus 137 nD~v~t~~~L~lr~~l~-~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 215 (450)
T cd01596 137 DDFPPAAHIAAALALLE-RLLPALEQLQDALDAKAEEFADIVKIGRTHLQDAVPLTLGQEFSGYAAQLARDIARIEAALE 215 (450)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCeeehHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.|||||||+||++++++.++.++++++|++|||+.++.+|++||+++||+++++++++++++++|+|||+||++|+|
T Consensus 216 ~~~~~plGg~A~Gt~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~d~~~~rd~~~e~~~~la~~~~~l~ria~Dl~~~ss 295 (450)
T cd01596 216 RLRELNLGGTAVGTGLNAPPGYAEKVAAELAELTGLPFVTAPNLFEATAAHDALVEVSGALKTLAVSLSKIANDLRLLSS 295 (450)
T ss_pred HHHHhCCCCcceeCCCCCChhHHHHHHHHHHHHhCCCCccCcCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999988999999999888999999999999997668999999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+||+|||||.+|++++|||||||||||+.+|.++++++++.|+..+++...++.++|++...|...+.++++++.+.+++
T Consensus 296 ~~~~e~gev~~~~~~~GSS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 375 (450)
T cd01596 296 GPRAGLGEINLPANQPGSSIMPGKVNPVIPEAVNMVAAQVIGNDTAITMAGSAGQLELNVFKPVIAYNLLQSIRLLANAC 375 (450)
T ss_pred CCcCCCeeEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccHHHHHHHhhcCcccccchhhHHHHHHHHHHHHHHHHH
Confidence 88899999999998899999999999999999999999999999999878899999987776666778999999999999
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCC
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVV 394 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ld 394 (403)
..++..++++|+||++||++|+..+++++++||+.+||+.|+++++++.++|++|++++.+++.++++++++++|
T Consensus 376 ~~~~~~~l~~l~v~~~rm~~~l~~~~~~~t~LA~~lg~~~a~~~v~~a~~~g~~l~~~~~~~~~~~~~~l~~~~d 450 (450)
T cd01596 376 RSFRDKCVEGIEANEERCKEYVENSLMLVTALNPHIGYEKAAEIAKEALKEGRTLREAALELGLLTEEELDEILD 450 (450)
T ss_pred HHHHHHHHccCEECHHHHHHHHHhCcchHHHHhHHHhHHHHHHHHHHHHHcCCCHHHHHHHhCCCCHHHHHHHhC
Confidence 999889999999999999999999999999999999999999999999999999999998889999999999886
No 14
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-82 Score=627.25 Aligned_cols=370 Identities=24% Similarity=0.315 Sum_probs=327.4
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| |+++++++|.+++.+|.++...++|.+++. .||+|++ ||++|++++| ++|+ ++|+| ||||
T Consensus 48 ~~Gii~~ee~~~I~~~L~~l~~e~~~g~~~~~~~----~EDvH~a----iE~~L~~~iG-~~gg-kLhtg------RSRN 111 (459)
T COG0165 48 KQGIITEEEAAKILEGLEELLEEIRAGKFELDPD----DEDVHTA----IEARLIERIG-DVGG-KLHTG------RSRN 111 (459)
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHhcCCccCCCc----cccHHHH----HHHHHHHHHh-hhhc-hhccc------cchh
Confidence 689 999999999999999998777778887774 4555665 9999999999 7885 58865 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|||+|++|||+|+++. .|...+..|+++|+++|++|.+++||||||+|+|||+|||||+++|++.|.||++||.+++++
T Consensus 112 DQVatd~rL~lr~~~~-~l~~~i~~l~~aL~~~Ae~~~~~imPGyTHlQ~AQPvtf~H~llay~~~l~RD~~Rl~d~~~r 190 (459)
T COG0165 112 DQVATDLRLWLRDKLL-ELLELIRILQKALLDLAEEHAETVMPGYTHLQRAQPVTFAHHLLAYAEMLARDIERLRDALKR 190 (459)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCccCCcccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+|.||||+||. ||++++|| +++|++|||+. +..|++|++++||+++++++++++++.+|||||+||++|+|
T Consensus 191 vn~sPLGagAlaGt~~~iDR-------~~tA~lLGF~~-~~~Nsldavs~Rdf~le~l~~~s~~~~~LSRlaedlI~wss 262 (459)
T COG0165 191 VNVSPLGAGALAGTPFPIDR-------ERTAELLGFDA-VTRNSLDAVSDRDFILEFLSAAALIMVHLSRLAEDLILWSS 262 (459)
T ss_pred hccCCccccccCCCCCCCCH-------HHHHHHcCCch-hhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999997 99999998 57999999998 58999999999999999999999999999999999999998
Q ss_pred CCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 240 ~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
. |||+|++|+. ++||||||||||||++|++|+++++++|++++++....+.++-+|-..-.....+|++++.+..+
T Consensus 263 ~---EfgfI~l~D~~sTGSSIMPQKKNPD~~ELiRgk~grv~G~l~~ll~~~k~lPlaYnrDlQedke~lfds~~t~~~~ 339 (459)
T COG0165 263 P---EFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIGALTGLLTIMKGLPLAYNRDLQEDKEPLFDSVDTLEDS 339 (459)
T ss_pred c---cCceEeCCcccccccccCCCCCCCcHHHHHHHhhhhhHHHHHHHHHHHhcCcccccHHHHhhhHHHHHHHHHHHHH
Confidence 5 8999999998 89999999999999999999999999999999977544433333211111124489999999999
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCcc-----ccHHHHHH----HHHHHHHcCCCHHHHHHhc----CCCC
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVTSLNPK-----IGYDNAAA----VAKKAHKEGTTLKDAALKL----GVLN 385 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~-----lg~~~a~~----~~~~a~~~g~~l~e~~~~~----~~l~ 385 (403)
+..+. .++++|+||+|+|++.+..+++++|++|++ ++||+||+ +|+.+.+.|+++.+...+. +.+-
T Consensus 340 l~~~~-~mv~~l~vn~e~~~~a~~~gfs~aTdlAd~lv~kGvPFReAh~ivG~~v~~~~~~~~~l~~l~~~~~~~~~~~~ 418 (459)
T COG0165 340 LRVLA-GMVSGLTVNKERMREAAEAGFSTATDLADYLVRKGVPFREAHEIVGEAVRRAEERGKDLADLSLEELQSISPLI 418 (459)
T ss_pred HHHHH-HHHccCeeCHHHHHHHhhcccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCHHhccHHHHhhhcccc
Confidence 99985 799999999999999999999999999875 69999985 5567778888887765542 3466
Q ss_pred HHHHhhcCCcccccC
Q 015619 386 SEEFDNLVVPEKMIG 400 (403)
Q Consensus 386 ~~~l~~~ldp~~~vg 400 (403)
++++.++++|...|.
T Consensus 419 ~~dv~~~l~~~~~v~ 433 (459)
T COG0165 419 DEDVYEVLTPEESVA 433 (459)
T ss_pred chHHHHHhchHHHHH
Confidence 778889999987764
No 15
>PLN02646 argininosuccinate lyase
Probab=100.00 E-value=9.9e-78 Score=613.67 Aligned_cols=368 Identities=22% Similarity=0.276 Sum_probs=320.1
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++|++|.++...+.|++++. .||+|++ ||+++++++| +.|+ |||+|||||
T Consensus 61 ~~Gii~~~~a~~I~~al~~i~~~~~~~~f~~~~~----~ed~h~~----iE~~L~e~~G-~~g~-------~lH~grSrN 124 (474)
T PLN02646 61 KQGIITDEDRDSILDGLDEIEKEIEAGKFEWRPD----REDVHMN----NEARLTELIG-EPAK-------KLHTARSRN 124 (474)
T ss_pred HCCCCCHHHHHHHHHHHHHHHcCcccCCCcCCCC----CCchHHH----HHHHHHHHhc-hhhC-------cccCCCChh
Confidence 689 999999999999999998877788886652 4788888 9999999998 5663 455679999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
||++|+++|++|+.+. .+.+.|.+|+++|.++|++|++++||||||+|+|||||||||+++|+++|.||++||.+++++
T Consensus 125 D~v~Ta~~L~lr~~l~-~l~~~L~~L~~~L~~~A~~~~dtvmpGrTHlQ~AqPiT~G~~l~~~~~~l~rd~~RL~~~~~r 203 (474)
T PLN02646 125 DQVATDTRLWCRDAID-VIRKRIKTLQVALVELAEKNVDLVVPGYTHLQRAQPVLLSHWLLSHVEQLERDAGRLVDCRPR 203 (474)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEEecccCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++.+||||||+ ||++++++ +++|++|||.. +..|++||+++||+++++++++++++++|+|||+||++|+|
T Consensus 204 ~~~~pLGgga~aGt~~~idr-------~~~A~~LGf~~-~~~n~~da~~~RD~~~e~~~~la~ia~~LsRia~Dl~l~ss 275 (474)
T PLN02646 204 VNFCPLGSCALAGTGLPIDR-------FMTAKDLGFTA-PMRNSIDAVSDRDFVLEFLFANSITAIHLSRLGEEWVLWAS 275 (474)
T ss_pred hhhcCCcchhhcCCCCCCCH-------HHHHHHhCCCC-CCCChHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999997 99888876 57999999987 57899999999999999999999999999999999999996
Q ss_pred CCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCc--cccccchhhHHHHhHHHHHHHHH
Q 015619 240 GPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNG--HFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 240 ~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
+ |||+|.+|+. ++|||||||||||+++|.+|+++++++|++++++....+. +++++.-. ....+++++..+.
T Consensus 276 ~---e~g~v~~~d~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~p~~~~rD~q~--~~~~l~~~~~~~~ 350 (474)
T PLN02646 276 E---EFGFVTPSDAVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTVLALCKGLPTAYNRDLQE--DKEPLFDSVDTVS 350 (474)
T ss_pred C---CCCeeeeCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhhHHHHHHhcCCchHhhcchhh--HHHHHHHHHHHHH
Confidence 4 8999999975 8999999999999999999999999999999887543322 23333210 1123677778887
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCc-----cccHHHHHHHH----HHHHHcCCCHHHHHHhc----CC
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLMLVTSLNP-----KIGYDNAAAVA----KKAHKEGTTLKDAALKL----GV 383 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~-----~lg~~~a~~~~----~~a~~~g~~l~e~~~~~----~~ 383 (403)
+++..+. .++++|+||++||++++..++.+++++++ .+||++||++| +.+.++|++|.++..+. ..
T Consensus 351 ~~l~~~~-~~l~~l~v~~~rm~~~l~~~~~~At~la~~Lv~~Gi~fr~Ah~iV~~~v~~a~~~g~~l~~l~~~~~~~~~~ 429 (474)
T PLN02646 351 DMLEVAT-EFAQNITFNPERIKKSLPAGMLDATTLADYLVRKGVPFRETHHIVGAAVALAESKGCELSDLTLEDLKSINP 429 (474)
T ss_pred HHHHHHH-HHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcc
Confidence 7777774 69999999999999999999998888764 37999999655 55778899999876542 34
Q ss_pred CCHHHHhhcCCcccccC
Q 015619 384 LNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 384 l~~~~l~~~ldp~~~vg 400 (403)
..++++.+++||+++|.
T Consensus 430 ~~~~~~~~~l~~~~~v~ 446 (474)
T PLN02646 430 VFEEDVYEVLGVENSVE 446 (474)
T ss_pred cchHHHHHhCCHHHHHH
Confidence 45778999999999875
No 16
>TIGR00838 argH argininosuccinate lyase. This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens.
Probab=100.00 E-value=4.4e-77 Score=609.42 Aligned_cols=371 Identities=22% Similarity=0.264 Sum_probs=325.7
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++|+++.++...++|++++.+ ||+|+ +||+++++++|.+.|+ |||+|+|||
T Consensus 44 ~~G~l~~~~a~~I~~al~~i~~~~~~~~~~~~~~~----~d~~~----~ie~~l~e~~g~~~g~-------~iH~g~Srn 108 (455)
T TIGR00838 44 KAGILTEEEAAKIIEGLNELKEEGREGPFILDPDD----EDIHM----AIERELIDRVGEDLGG-------KLHTGRSRN 108 (455)
T ss_pred HCCCCCHHHHHHHHHHHHHHHcCcccCCcCCCCCc----CcHHH----HHHHHHHHHhCCCccC-------CccCCCChh
Confidence 689 9999999999999999987777788888864 45555 4999999999865553 566789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .+.+.|..|+++|.++|++|++++||||||+||||||||||||++|+++|.|+++||.+++++
T Consensus 109 D~~~Ta~~L~lr~~l~-~l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~L~r~~~rL~~~~~~ 187 (455)
T TIGR00838 109 DQVATDLRLYLRDHVL-ELAEALLDLQDALIELAEKHVETLMPGYTHLQRAQPITLAHHLLAYAEMLLRDYERLQDALKR 187 (455)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCEeecccccccceeccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++.+|||||++ ||+++.++ +++|+.|||+.+ ..|++||+++||++++++++++.++++|+|||+||++|+|
T Consensus 188 ~~~~plGg~a~aGt~~~~~r-------~~~a~~LG~~~~-~~n~~~a~~~rd~~~e~~~~l~~~a~~L~ria~Dl~l~ss 259 (455)
T TIGR00838 188 VNVSPLGSGALAGTGFPIDR-------EYLAELLGFDAV-TENSLDAVSDRDFILELLFVAALIMVHLSRFAEDLILWST 259 (455)
T ss_pred hccCCcchhcccCCCCCCCH-------HHHHHHcCCCCC-cCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999888 89887766 479999999985 7899999999999999999999999999999999999997
Q ss_pred CCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 240 ~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
+ |||||.+|+. ++|||||||||||+.+|.++++++++.|++.+++....+.+++.+...+.....+++++..+..+
T Consensus 260 ~---e~gei~lp~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~a 336 (455)
T TIGR00838 260 G---EFGFVELPDEFSSGSSIMPQKKNPDVAELIRGKTGRVQGNLTGMLMTLKALPLAYNRDLQEDKEPLFDALKTVELS 336 (455)
T ss_pred C---CCCeeeCCCCCCCccCCCCCCcCChHHHHHHHHHHHHhhhHHHHHHHHhcCChHhhhhhHhhHHHHHHHHHHHHHH
Confidence 4 7999999986 89999999999999999999999999999999977655555544433333334577788888888
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCcc-----ccHHHHHH----HHHHHHHcCCCHHHHHHhcC----CCC
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVTSLNPK-----IGYDNAAA----VAKKAHKEGTTLKDAALKLG----VLN 385 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~-----lg~~~a~~----~~~~a~~~g~~l~e~~~~~~----~l~ 385 (403)
+..+. .++++|+||++||++|+..++.+++++++. +||++||+ +++.+.++|++++|++.++. .+.
T Consensus 337 l~~~~-~~i~~l~v~~~rm~~~~~~~~~~at~la~~Lv~~g~~~r~Ah~~v~~~~~~a~~~g~~l~~~~~~~~~~~~~~~ 415 (455)
T TIGR00838 337 LEMAT-GMLDTITVNKERMEEAASAGFSNATELADYLVRKGVPFREAHHIVGELVATAIERGKGLEELTLEELQKFSPEF 415 (455)
T ss_pred HHHHH-HHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhhcccC
Confidence 87775 699999999999999999999998887653 68888875 45568889999999887653 255
Q ss_pred HHHHhhcCCcccccC
Q 015619 386 SEEFDNLVVPEKMIG 400 (403)
Q Consensus 386 ~~~l~~~ldp~~~vg 400 (403)
++++++++||.+++.
T Consensus 416 ~~~l~~~ldp~~~v~ 430 (455)
T TIGR00838 416 DEDVYEALDPESSVE 430 (455)
T ss_pred HHHHHHHCCHHHHHH
Confidence 677999999999985
No 17
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=2.8e-77 Score=610.01 Aligned_cols=377 Identities=24% Similarity=0.308 Sum_probs=330.3
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
+.| ||++.+++|.++|++ +.|+++.++++++++.|..+. .+ +.+.+.+|. . ..|+++|||+|+|||
T Consensus 43 ~~G~ip~~~a~~I~~a~~~-------~~~d~~~~~~~~~~~~~~~~~-lv-~~l~~~~~~--~--~~~~~~~vH~G~Ssn 109 (452)
T PRK09053 43 ACGVIPAAAVAPIEAACDA-------ERLDLDALAQAAALAGNLAIP-LV-KQLTAQVAA--R--DAEAARYVHWGATSQ 109 (452)
T ss_pred HcCCCCHHHHHHHHHhccc-------cCCCHHHHHHHHhhcCCchHH-HH-HHHHHHhcc--c--CcchhccccCCCChh
Confidence 689 999999999999865 347788888888877775432 22 234445542 1 258899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .+.+.|..|+++|.++|++|++|+||||||+||||||||||||++|+++|.||++||.+++++
T Consensus 110 Di~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~ 188 (452)
T PRK09053 110 DIIDTGLVLQLRDALD-LLEPDLDRLCDALATLAARHRATPMVGRTWLQQALPVTLGLKFAGWLDALLRHRQRLAALRPR 188 (452)
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCeeehhccCCcceechHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+|||| ++||+. ..++++..+++++|++|||+.+..+ |+++||+++++++++++++++|+|||+||++|+
T Consensus 189 ~~~~~lGg-avGt~~-~~~~~~~~v~~~~a~~LGl~~~~~~----~~~~rD~~~e~~~~la~la~~L~kia~Di~ll~-- 260 (452)
T PRK09053 189 ALVLQFGG-AAGTLA-SLGEQALPVAQALAAELQLALPALP----WHTQRDRIAEFASALGLLAGTLGKIARDVSLLM-- 260 (452)
T ss_pred hhhccccc-hhhccc-ccccchHHHHHHHHHHcCCCCCCCC----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 99999999 699944 4566778899999999999986433 579999999999999999999999999999999
Q ss_pred CCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 241 PRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 241 ~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
++|||||.+|. +++|||||||||||+.+|.++++|+++.|+..++ +..+.+++|++.+.|..+|..++.+..+...
T Consensus 261 -~~e~gev~e~~~~~~~GSSiMP~KrNPv~~E~i~~~a~~v~g~~~~~-~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~ 338 (452)
T PRK09053 261 -QTEVGEVFEPAAAGKGGSSTMPHKRNPVGCAAVLTAATRAPGLVATL-FAAMPQEHERALGGWHAEWDTLPELACLAAG 338 (452)
T ss_pred -ccccchhhccccCCCCCcCCCCCCCCchHHHHHHHHHHHHHHHHHHH-HHhChhhhcccCCccHHHHHHHHHHHHHHHH
Confidence 67999998875 3799999999999999999999999999999887 6778899999988888888666665555555
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHH------HhhCccccHHHHHHH----HHHHHHcCCCHHHHHHhc----CCC
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPKIGYDNAAAV----AKKAHKEGTTLKDAALKL----GVL 384 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~------~~la~~lg~~~a~~~----~~~a~~~g~~l~e~~~~~----~~l 384 (403)
+......++++|+||++||++|+..+.+++ +.|++.+||++||++ ++.+.++|++|++++.++ +.+
T Consensus 339 al~~~~~~l~~l~v~~erm~~~l~~s~~~~~ae~~~~~La~~lgr~~Ah~iV~~~~~~a~~~g~~~~~~~~~~~~~~~~l 418 (452)
T PRK09053 339 ALAQMAQIVEGLEVDAARMRANLDLTHGLILAEAVMLALADRIGRLDAHHLVEQASKRAVAEGRHLRDVLAEDPQVSAHL 418 (452)
T ss_pred HHHHHHHHHcCCEECHHHHHHHHHhcCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHCCCHHHHHHhChhhhccC
Confidence 555556999999999999999998887665 789999999999987 566788999999998876 679
Q ss_pred CHHHHhhcCCcccccCCC
Q 015619 385 NSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 385 ~~~~l~~~ldp~~~vg~~ 402 (403)
+++++++++||.+|+|.+
T Consensus 419 ~~~~l~~~l~P~~~~g~~ 436 (452)
T PRK09053 419 SPAALDRLLDPAHYLGQA 436 (452)
T ss_pred CHHHHHHHcCHHHHhcch
Confidence 999999999999999975
No 18
>KOG1317 consensus Fumarase [Energy production and conversion]
Probab=100.00 E-value=1.2e-75 Score=544.93 Aligned_cols=401 Identities=80% Similarity=1.183 Sum_probs=392.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChhh
Q 015619 2 EYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSND 81 (403)
Q Consensus 2 ~~Gi~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~nD 81 (403)
+.|+++..+++|.++++++.+++..++||+..+|.|+|+..|||+||||.|+++|.+|.+.|.+++||++|||..+|+||
T Consensus 87 ~~GLDpkis~Ai~~AadeV~~GKL~dhFPLvvwQTGSGTQsNMN~NEVIsNrAieilGg~~GsK~VHPNdHvN~SQSSND 166 (487)
T KOG1317|consen 87 EYGLDPKISKAISQAADEVASGKLNDHFPLVVWQTGSGTQSNMNANEVISNRAIEILGGKLGSKKVHPNDHVNKSQSSND 166 (487)
T ss_pred hhCCChHHHHHHHHHHHHHhcCcccccCceeEEecCCCccccCcHHHHHHHHHHHHhcccccCcccCCccccccccccCC
Confidence 45688999999999999999999999999999999999999999999999999999999999877999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhhh
Q 015619 82 TFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRM 161 (403)
Q Consensus 82 ~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~ 161 (403)
..+|++++....++...|...|..|..+|..++.+|+|++.+||||.|+|.|.|+|+.|++|++.+...+.|+..+.+|+
T Consensus 167 TFPtamHIa~~~ei~~~L~P~l~~L~~aL~aKs~EfkdIiKIGRTHtqDAvPLTLGQEFsgY~qQ~~ngl~Rv~~~lpr~ 246 (487)
T KOG1317|consen 167 TFPTAMHIAAATEINSRLIPALTNLRDALEAKSKEFKDIIKIGRTHTQDAVPLTLGQEFSGYVQQVTNGLQRVAATLPRL 246 (487)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHhhhHHHHHHHHhcccccccccccchhhhhhhHHHHHHHHHHHHHhhhhHH
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015619 162 YQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGP 241 (403)
Q Consensus 162 ~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~~ 241 (403)
....+||+|+||+.+.-++|+.++.++++++.||+....+|.|.+.+.+|.++|+..+|..++.+|-||++||+++.|+|
T Consensus 247 y~LA~GGTAVGTGLNTr~GFaeK~a~~va~ltgLpFvtApNkFEALAahDA~VE~~GalNt~A~SlmKianDIRfLGSGP 326 (487)
T KOG1317|consen 247 YQLAQGGTAVGTGLNTRKGFAEKIAARVAELTGLPFVTAPNKFEALAAHDAMVEVSGALNTIAVSLMKIANDIRFLGSGP 326 (487)
T ss_pred HHHhcCCccccccccccccHHHHHHHHHHHHhCCCceecccHHHHHHhhhhHHHhcccHHHHHHHHHHHhhhhhhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHHHH
Q 015619 242 RCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASAS 321 (403)
Q Consensus 242 ~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (403)
|+++||+.+|+..+||||||.|+||..||.+-..|.+|.|+.+++.....+++||+|+++|++..+++.++.++.|+...
T Consensus 327 RcGlgEL~LPENEPGSSIMPGKVNPTQcEamTmvcaQVMGN~vAvtvgGsnGhFELNVFKP~i~~nvL~SirLl~D~~~s 406 (487)
T KOG1317|consen 327 RCGLGELMLPENEPGSSIMPGKVNPTQCEAMTMVCAQVMGNHVAVTVGGSNGHFELNVFKPLIASNVLHSIRLLADASVS 406 (487)
T ss_pred CCCccccccCCCCCCcccCCCCCCcHHHHHHHHHHHHHhcCceEEEecccCceeEEecchHHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccccCC
Q 015619 322 FEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 401 (403)
Q Consensus 322 ~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~vg~ 401 (403)
|...|+.||+.|+||+.+.+.+++|++|+|.+++||+.|..+++.|.++|.+|.+...+.+.+++|++++|..|+.++|+
T Consensus 407 F~~nCV~GI~aN~erI~kll~eSLMLVTALNPhIGYD~aAkiAKtAhKng~TLk~eal~lG~lTeeqFdewV~Pe~Mlgp 486 (487)
T KOG1317|consen 407 FTKNCVVGIEANKERIAKLLNESLMLVTALNPHIGYDNAAKIAKTAHKNGTTLKEEALKLGVLTEEQFDEWVVPEKMLGP 486 (487)
T ss_pred hhhhhhhcccCCHHHHHHHHHhhhhhhhccCCccCchhHHHHHHHHhhcCCcHHHHHHHhcCCCHHHHHhhhCHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C
Q 015619 402 S 402 (403)
Q Consensus 402 ~ 402 (403)
.
T Consensus 487 k 487 (487)
T KOG1317|consen 487 K 487 (487)
T ss_pred C
Confidence 4
No 19
>PRK00855 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3.3e-75 Score=595.80 Aligned_cols=368 Identities=22% Similarity=0.311 Sum_probs=321.5
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
+.| ||++++++|.++|+++.++...+.|++++ ++||+|++ ||+++++++| +.|+ |||+|+|||
T Consensus 49 ~~G~l~~~~a~~i~~al~~i~~~~~~~~~~~~~----~~~d~~~~----ie~~l~~~~g-~~g~-------~iH~g~Srn 112 (459)
T PRK00855 49 KQGILSEEEAEKILAGLDEILEEIEAGKFEFSP----ELEDIHMA----IEARLTERIG-DVGG-------KLHTGRSRN 112 (459)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhhcccCCcccCC----CCCcHHHH----HHHHHHHHhc-cccC-------cccCCCCHh
Confidence 689 99999999999999999877778898887 46888888 9999999998 5653 456789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .+.+.|..|+++|.++|++|++|+||||||+|+|||||||||+++|+++|.||++||.+++++
T Consensus 113 D~~~Ta~~L~~r~~l~-~l~~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~T~G~~l~~~~~~L~r~~~rL~~~~~~ 191 (459)
T PRK00855 113 DQVATDLRLYLRDEID-EIAELLLELQKALLDLAEEHADTIMPGYTHLQRAQPVTFGHHLLAYAEMLARDLERLRDARKR 191 (459)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEeecCcCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++.|||||+|+ ||+++.++ +++|++|||+. +..|++||+++||++++++++++.++++|+|||+||++|+|
T Consensus 192 ~~~~plGgaag~gt~~~~~r-------~~~a~~LG~~~-~~~n~~~a~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~ss 263 (459)
T PRK00855 192 VNRSPLGSAALAGTTFPIDR-------ERTAELLGFDG-VTENSLDAVSDRDFALEFLSAASLLMVHLSRLAEELILWSS 263 (459)
T ss_pred HhhcCcchhhhcCCCCCcCH-------HHHHHHcCCCC-CCCCHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999886 88887766 57999999998 57999999999999999999999999999999999999997
Q ss_pred CCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccC--ccccccchhhHHHHhHHHHHHHHH
Q 015619 240 GPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN--GHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 240 ~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
+ |||||++|+. ++|||||||||||+.+|.++++|+++.|++.+++....+ ..++++... ....+++++..+.
T Consensus 264 ~---e~gei~~p~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rD~~~--~~~~l~~~~~~~~ 338 (459)
T PRK00855 264 Q---EFGFVELPDAFSTGSSIMPQKKNPDVAELIRGKTGRVYGNLTGLLTVMKGLPLAYNRDLQE--DKEPLFDAVDTLK 338 (459)
T ss_pred c---CCCeEeCCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHhcCchHHhhhhhhh--hHHHHHHHHHHHH
Confidence 4 8999999986 599999999999999999999999999999888753322 223433221 1134677788887
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCcc-----ccHHHHHH----HHHHHHHcCCCHHHHHHhc----CC
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPK-----IGYDNAAA----VAKKAHKEGTTLKDAALKL----GV 383 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~-----lg~~~a~~----~~~~a~~~g~~l~e~~~~~----~~ 383 (403)
+++..+. .++++|+||+++|++++..++++++++++. +||++||+ +++.+.++|++++++..+. ..
T Consensus 339 ~al~~~~-~~l~~l~v~~~~m~~~l~~~~~~at~la~~Lv~~gi~~r~Ah~~v~~~~~~a~~~g~~~~~~~~~~~~~~~~ 417 (459)
T PRK00855 339 LSLEAMA-GMLETLTVNKERMREAAGKGFSTATDLADYLVRKGVPFREAHEIVGKAVREAEERGVDLADLSLEELQAFSP 417 (459)
T ss_pred HHHHHHH-HHHccCEECHHHHHHHHHcchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHhcc
Confidence 7777775 699999999999999999999998887653 67888875 5667788999999976653 34
Q ss_pred CCHHHHhhcCCcccccC
Q 015619 384 LNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 384 l~~~~l~~~ldp~~~vg 400 (403)
+.++++.+++||.++|.
T Consensus 418 ~~~~~~~~~~~~~~~v~ 434 (459)
T PRK00855 418 LITEDVYEVLTPEGSVA 434 (459)
T ss_pred cchHHHHHHhChHHHHH
Confidence 56778999999998875
No 20
>PRK06705 argininosuccinate lyase; Provisional
Probab=100.00 E-value=1.9e-75 Score=600.68 Aligned_cols=368 Identities=18% Similarity=0.203 Sum_probs=305.3
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++++++.+ ...+.|..++ .++|+|++ ||.++++..|++.|+ |+|+|||||
T Consensus 54 ~~GiIp~e~a~~I~~al~~~~~-~~~~~l~~~~----~~edv~~~----ie~~l~~~~G~~~g~-------~lH~GrSrn 117 (502)
T PRK06705 54 EENLMKKEEAKFILHALKKVEE-IPEEQLLYTE----QHEDLFFL----VEHLISQEAKSDFVS-------NMHIGRSRN 117 (502)
T ss_pred HCCCCCHHHHHHHHHHHHHhhh-cccCccccCC----CCCchHHH----HHHHHHHhcCchhhc-------cccCCCCHh
Confidence 689 999999999999998743 2234454333 34455554 999999887755553 555779999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
||++|+++|++|+.+. .+.+.|..++++|.++|++|++|+||||||+|||||||||||+++|+++|.||++||.+++++
T Consensus 118 D~v~Ta~~L~lr~~l~-~l~~~l~~l~~~l~~~A~~~~~t~m~g~TH~Q~AqP~T~G~~l~~~~~~l~r~~~rL~~~~~r 196 (502)
T PRK06705 118 DMGVTMYRMSLRRYVL-RLMEHHLLLQESILQLAADHKETIMPAYTHTQPAQPTTFGHYTLAIYDTMQRDLERMKKTYKL 196 (502)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEEecccCCccceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++.|||||+|. ||++++ .++++|++|||+.+ ..|++|++++||+++++++++++++++|+|||+||++|+|
T Consensus 197 ~~~~plGgaag~gt~~~~-------~r~~~a~~LGf~~~-~~ns~~a~~~rD~~~e~~~~la~~~~~L~Ria~Dl~~~ss 268 (502)
T PRK06705 197 LNQSPMGAAALSTTSFPI-------KRERVADLLGFTNV-IENSYDAVAGADYLLEVSSLLMVMMTNTSRWIHDFLLLAT 268 (502)
T ss_pred hCcCCchhhhhccCCchH-------HHHHHHHHcCCCCC-cCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999554 554432 34799999999984 6799999999999999999999999999999999999996
Q ss_pred CCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHH----HHHH
Q 015619 240 GPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLH----SLRL 314 (403)
Q Consensus 240 ~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~----~~~~ 314 (403)
+|||+|++|+. .+|||||||||||+++|.+|++++++.|++++++. .+.++++++... .+|.+.| .+..
T Consensus 269 ---~e~g~iel~e~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~l~-~~~~~~~~~~~d--~q~~~~~~~~~~~~~ 342 (502)
T PRK06705 269 ---KEYDGITVARPYVQISSIMPQKRNPVSIEHARAITSSALGEAFTVFQ-MIHNTPFGDIVD--TEDDLQPYLYKGIEK 342 (502)
T ss_pred ---CCCCeeeecCCCCCccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH-HhcCCcchhhhh--hHhhhhhHHHHHHHH
Confidence 48999998886 68999999999999999999999999999988854 444444433222 3344344 4444
Q ss_pred HHHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCc------cccHHHHHHHHH----HHHHcCCCHHHHHHhc---
Q 015619 315 LGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNP------KIGYDNAAAVAK----KAHKEGTTLKDAALKL--- 381 (403)
Q Consensus 315 ~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~------~lg~~~a~~~~~----~a~~~g~~l~e~~~~~--- 381 (403)
..+++..+ ..++++|+||++||++|+..++.+++++++ .+||++||++|. .+.++|++|.+++.++
T Consensus 343 ~~~~l~~~-~~~l~~l~v~~~rm~~~~~~g~~~At~la~~Lv~~~Gl~fr~Ah~iV~~~v~~a~~~~~~l~~~~~~~~~~ 421 (502)
T PRK06705 343 AIRVFCIM-NAVIRTMKVEEDTLKRRSYKHAITITDFADVLTKNYGIPFRHAHHAASVIANMSLEQKKELHELCFKDVNI 421 (502)
T ss_pred HHHHHHHH-HHHHCcCEECHHHHHHHHhcCchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCHHHhhHHHHHh
Confidence 44444444 689999999999999999998888877643 389999997554 5777899988876542
Q ss_pred -------CCCCHHHHhhcCCcccccCC
Q 015619 382 -------GVLNSEEFDNLVVPEKMIGP 401 (403)
Q Consensus 382 -------~~l~~~~l~~~ldp~~~vg~ 401 (403)
..++++++++++||.+|++.
T Consensus 422 ~~~~~~~~~~~~~~l~~~ldp~~~v~~ 448 (502)
T PRK06705 422 YLQEKFKIQLLEKEWEEIISPEAFIQK 448 (502)
T ss_pred hhhhhhhhcCCHHHHHHHCCHHHHHhh
Confidence 34788999999999999984
No 21
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=6e-75 Score=591.65 Aligned_cols=375 Identities=24% Similarity=0.304 Sum_probs=317.0
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
+.| ||++++++|.++++++..+ .+.+..+.+++.|. ...+|..+.+++|++.| .|||+|||||
T Consensus 37 ~~Gii~~~~a~~I~~al~~~~~~-------~~~~~~~~~~~~~~--v~a~e~~l~e~~g~~~g-------~~lH~grSrn 100 (437)
T cd01597 37 ELGVIPKEAAAEIAAAADVERLD-------LEALAEATARTGHP--AIPLVKQLTAACGDAAG-------EYVHWGATTQ 100 (437)
T ss_pred HcCCCCHHHHHHHHHhccccCCC-------HHHHHHHHHHhCCC--cHHHHHHHHHHcCcccc-------CeeecCccHh
Confidence 689 9999999999998776211 11122222333332 22378888899885444 4566789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .+.+.|..|+++|.++|++|++++||||||+|||||||||||+++|+++|.||++||.+++++
T Consensus 101 D~~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 179 (437)
T cd01597 101 DIIDTALVLQLRDALD-LLERDLDALLDALARLAATHRDTPMVGRTHLQHALPITFGLKVAVWLSELLRHRERLDELRPR 179 (437)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeehhhcCccceechHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+|||| |+||+.+ .+.++..+++++|+.|||+.+. .+ |+++||++++++++++.++++|+|||+||++|++
T Consensus 180 ~~~~~lGg-a~Gtg~~-~~~~~~~~~~~~a~~LGf~~~~-~~---~~~~rd~~~e~~~~l~~~a~~l~rla~Dl~l~s~- 252 (437)
T cd01597 180 VLVVQFGG-AAGTLAS-LGDQGLAVQEALAAELGLGVPA-IP---WHTARDRIAELASFLALLTGTLGKIARDVYLLMQ- 252 (437)
T ss_pred hhhhcccc-ccccccc-cCCcHHHHHHHHHHHcCCCCCC-Cc---cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999999 8888764 3445667889999999999853 33 6899999999999999999999999999999994
Q ss_pred CCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 241 PRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 241 ~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
+|||||.+|+ .++|||||||||||+.+|.++++|+++.|+.+++ +....++++++...|...|..++.+......
T Consensus 253 --~e~gel~~~~~~~~~GSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~-~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~ 329 (437)
T cd01597 253 --TEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVALARRVPGLAALL-LDAMVQEHERDAGAWHAEWIALPEIFLLASG 329 (437)
T ss_pred --cccceeecccCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHH-HHhchhhcccCCchhHHHHHHHHHHHHHHHH
Confidence 6999999996 5899999999999999999999999999997666 4565688999887777777777655555555
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHH------hhCccccHHHHHHH----HHHHHHcCCCHHHHHHhc----CCC
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVT------SLNPKIGYDNAAAV----AKKAHKEGTTLKDAALKL----GVL 384 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~------~la~~lg~~~a~~~----~~~a~~~g~~l~e~~~~~----~~l 384 (403)
++.+...++++|+||++||++++..++++++ .|++.+||++||++ ++.+.++|.++++++.++ +.+
T Consensus 330 ~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~ae~l~~~l~~~i~~~~Ah~~v~~~~~~a~~~g~~~~~~~~~~~~~~~~l 409 (437)
T cd01597 330 ALEQAEFLLSGLEVNEDRMRANLDLTGGLILSEAVMMALAPKLGRQEAHDLVYEACMRAVEEGRPLREVLLEDPEVAAYL 409 (437)
T ss_pred HHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhccC
Confidence 5557789999999999999999987665543 56667999999977 566778999999998876 578
Q ss_pred CHHHHhhcCCcccccCCCC
Q 015619 385 NSEEFDNLVVPEKMIGPSD 403 (403)
Q Consensus 385 ~~~~l~~~ldp~~~vg~~~ 403 (403)
+++++++++||.+|+|+++
T Consensus 410 ~~~~l~~~ldp~~~v~~a~ 428 (437)
T cd01597 410 SDEELDALLDPANYLGSAP 428 (437)
T ss_pred CHHHHHHhcCHHHHhcchH
Confidence 9999999999999999763
No 22
>PRK04833 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3.6e-74 Score=586.30 Aligned_cols=368 Identities=20% Similarity=0.291 Sum_probs=310.7
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCC-CCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLND-HFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~ 79 (403)
|+| ||++++++|.++|+++.++...+ .+..++ ..+ ++|++||+++++++| +.|+ |+|+||||
T Consensus 46 e~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~----~~e----dv~~~ie~~L~~~~g-~~g~-------~lH~grSr 109 (455)
T PRK04833 46 TVGVLTADEQQQLEEALNELLEEVRANPQQILAS----DAE----DIHSWVEGKLIDKVG-DLGK-------KLHTGRSR 109 (455)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhhhhcCCcccCCC----CCc----hHHHHHHHHHHHHhc-cccC-------cccCCCCc
Confidence 689 99999999999999997542111 222222 223 377889999999998 5653 45577999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+. .+.+.|..|+++|.++|++|++|+||||||+|||||||||||+++|+++|.||++||.++++
T Consensus 110 nD~~~Ta~rl~~r~~l~-~l~~~l~~l~~~L~~~A~~~~~tvm~GrTH~Q~AqP~T~G~~~~~~~~~l~r~~~rL~~~~~ 188 (455)
T PRK04833 110 NDQVATDLKLWCKDQVA-ELLTALRQLQSALVETAENNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALK 188 (455)
T ss_pred hhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEEeccccCccceeccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 160 RMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 160 ~~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
+++.|||||+|+ ||++++++ +++|++|||+.+ ..|++|++++||+++++++++++++++|+|||+||++|+
T Consensus 189 ~~~~~plGgaA~~GT~~~~dr-------~~~a~~LGf~~~-~~n~~~a~~~rd~~~e~~~~l~~~a~~L~ria~Dl~l~s 260 (455)
T PRK04833 189 RLDVSPLGSGALAGTAYEIDR-------EQLAGWLGFASA-TRNSLDSVSDRDHVLELLSDASISMVHLSRFAEDLIFFN 260 (455)
T ss_pred HHhhcCCCccccccCCCCCCH-------HHHHHHhCCCCC-CCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999876 99998875 689999999985 789999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCc--cccccchhhHHHHhHHHHHHHH
Q 015619 239 SGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNG--HFELNVFKPMIASGLLHSLRLL 315 (403)
Q Consensus 239 s~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~ 315 (403)
|+ |||++++|+. ++|||||||||||+.+|.++++++++.|++++++....+. .++++...+. ..+++++..+
T Consensus 261 s~---e~g~~el~~~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~rd~~~~~--~~l~~~~~~~ 335 (455)
T PRK04833 261 SG---EAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMLMTLKGLPLAYNKDMQEDK--EGLFDALDTW 335 (455)
T ss_pred CC---CCCceeeCCCCCCCcccCCCCCCChHHHHHHHHHHHHHhhHHHHHHHHhCChHHHhhhhhhhH--HHHHHHHHHH
Confidence 64 8998888876 7999999999999999999999999999999887543332 3333322221 3466777777
Q ss_pred HHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCc-----cccHHHHHHHHH----HHHHcCCCHHHHHHh----cC
Q 015619 316 GDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNP-----KIGYDNAAAVAK----KAHKEGTTLKDAALK----LG 382 (403)
Q Consensus 316 ~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~-----~lg~~~a~~~~~----~a~~~g~~l~e~~~~----~~ 382 (403)
.++ +.++..++++|+||++||++++..++.+++++++ .+||++||++|. .+.++|.++.++..+ ..
T Consensus 336 ~~~-l~~~~~~l~~l~v~~~rm~~~~~~g~~~a~~~a~~L~~~g~~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~ 414 (455)
T PRK04833 336 LDC-LHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLAELQKFS 414 (455)
T ss_pred HHH-HHHHHHHHhhCeECHHHHHHHHHccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhhcCHHHHHHhc
Confidence 664 4455789999999999999999999988887764 379999987654 577789998886543 23
Q ss_pred CCCHHHHhhcCCcccccC
Q 015619 383 VLNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 383 ~l~~~~l~~~ldp~~~vg 400 (403)
.+.++++.+++||.++|.
T Consensus 415 ~~~~~~~~~~l~p~~~v~ 432 (455)
T PRK04833 415 SVIGDDVYPILSLQSCLD 432 (455)
T ss_pred ccchHHHHHhCCHHHHHH
Confidence 455777999999998874
No 23
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL). This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication.
Probab=100.00 E-value=1.7e-73 Score=580.89 Aligned_cols=369 Identities=22% Similarity=0.297 Sum_probs=314.5
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
+.| ||++++++|.++|+++.++...+.|+.++ ..++.|++ +|.++++++| +.| .|||+|+|||
T Consensus 25 ~~Gii~~~~a~~I~~al~~~~~~~~~~~~~~~~----~~~~~~~~----~e~~l~~~~g-~~~-------~~iH~G~Ssn 88 (435)
T cd01359 25 EQGILTEEEAAKILAGLAKIRAEIEAGAFELDP----EDEDIHMA----IERRLIERIG-DVG-------GKLHTGRSRN 88 (435)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhhcccCCccCCC----CCCcHHHH----HHHHHHHHHH-HHH-------hhhhccCCHH
Confidence 689 99999999999999997654456777665 35667777 7777888887 554 3566889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .+.+.|..++++|.++|++|++|+||||||+|||||||||||+++|+++|.|+++||.+++++
T Consensus 89 Di~~Ta~~L~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 167 (435)
T cd01359 89 DQVATDLRLYLRDALL-ELLELLLDLQRALLDRAEEHADTIMPGYTHLQRAQPITFGHYLLAYAEMLERDLERLADAYKR 167 (435)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEecCCCCCccceeccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++.|||||++. ||+++.++ +++|++|||+. +..|.++++++||++++++++++.++++|+|||+|+++|+|
T Consensus 168 ~~~~~lGgaag~gt~~~~~~-------~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~~~~l~~~a~~l~ria~Dl~l~~~ 239 (435)
T cd01359 168 VNVSPLGAGALAGTTFPIDR-------ERTAELLGFDG-PTENSLDAVSDRDFVLEFLSAAALLMVHLSRLAEDLILWST 239 (435)
T ss_pred hCcCCcccccccCCCCCCCH-------HHHHHHcCCCC-CccCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999665 77776555 57999999996 56788888999999999999999999999999999999996
Q ss_pred CCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccC--ccccccchhhHHHHhHHHHHHHHH
Q 015619 240 GPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN--GHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 240 ~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
+|||||.+|+. .+|||||||||||+.+|.++++++++.|++.++.....+ .+++++... ....+++++..+.
T Consensus 240 ---~e~gev~lpe~~~~GSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~~d~~~--~~~~l~~~~~~~~ 314 (435)
T cd01359 240 ---QEFGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPLAYNKDLQE--DKEPLFDAVDTLI 314 (435)
T ss_pred ---CCCCeeeCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhhHHhHHHHHhcCCCCccchhHHH--hhHHHHHHHHHHH
Confidence 47999999987 589999999999999999999999999999888655432 334433221 1123555666666
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCc------cccHHHHHHH----HHHHHHcCCCHHHHHHhc----C
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLMLVTSLNP------KIGYDNAAAV----AKKAHKEGTTLKDAALKL----G 382 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~------~lg~~~a~~~----~~~a~~~g~~l~e~~~~~----~ 382 (403)
+++..+ ..++++|+||++||++|+..++++++++++ .+||++||++ ++++.++|+++.|++.++ +
T Consensus 315 ~al~~~-~~~l~~l~v~~~~m~~~l~~~~~~a~~l~~~l~~~~g~~~r~Ah~~v~~~~~~a~~~g~~~~~~~~~~~~~~~ 393 (435)
T cd01359 315 ASLRLL-TGVISTLTVNPERMREAAEAGFSTATDLADYLVREKGVPFREAHHIVGRAVRLAEEKGKDLSDLTLAELQAIS 393 (435)
T ss_pred HHHHHH-HHHHhhCEECHHHHHHHHhcCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCChhhcCHHHHHhhc
Confidence 666666 579999999999999999999888877653 3788888864 456778899999987664 6
Q ss_pred CCCHHHHhhcCCcccccCC
Q 015619 383 VLNSEEFDNLVVPEKMIGP 401 (403)
Q Consensus 383 ~l~~~~l~~~ldp~~~vg~ 401 (403)
.+++++++.++||.+|+|.
T Consensus 394 ~l~~~~l~~~ldp~~~~~~ 412 (435)
T cd01359 394 PLFEEDVREALDPENSVER 412 (435)
T ss_pred ccCHHHHHHhCCHHHHHHh
Confidence 7899999999999999953
No 24
>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-74 Score=540.89 Aligned_cols=364 Identities=22% Similarity=0.266 Sum_probs=325.5
Q ss_pred CCCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCCh
Q 015619 1 MEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSS 79 (403)
Q Consensus 1 ~~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~ 79 (403)
++.| |+.++.++|.+++++|.+++..++|.+.| ..||+|++ .|+++.|++| +.++ ++|+| |||
T Consensus 50 ~~~glit~~e~dkil~gLe~i~~ew~~~kf~~~p----~dEDvHta----nErrL~eliG-~~ag-KlHTg------RSR 113 (464)
T KOG1316|consen 50 EKAGLITEAELDKILKGLEKIRREWAAGKFKLNP----NDEDVHTA----NERRLTELIG-EIAG-KLHTG------RSR 113 (464)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHhcCceEeCC----CchhhhhH----HHHHHHHHHh-hhhh-hcccC------ccc
Confidence 3689 99999999999999999999999999888 46777777 9999999999 5553 58876 999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
|||+.|.+|||+|+.+. .+.-.+..|++++.++|+.+.|++||||||+|.|||+.|.||+++++..|.||+.||.+++.
T Consensus 114 NDQV~TDlRLw~r~~i~-~~~~~l~~L~~~~v~rAe~~~dvlmpGYTHLQRAQpvrwsH~LlSha~~l~~D~~Rl~q~~~ 192 (464)
T KOG1316|consen 114 NDQVVTDLRLWLRDAID-TILGLLWNLIRVLVDRAEAELDVLMPGYTHLQRAQPVRWSHWLLSHAEQLTRDLGRLVQIRK 192 (464)
T ss_pred cchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhccCeeccChhhhhhccCchhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 160 RMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 160 ~~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
|+|..|||+||. |+.+++||. .+++.|||.. ++.|+++|++.||+++||.+|.++++.+|||+|+|+++|+
T Consensus 193 R~n~~PLGagALAGnpl~iDR~-------~la~~LgF~~-v~~NSm~AvsDRDFVvef~fw~sm~m~HlSRlaEdlIiy~ 264 (464)
T KOG1316|consen 193 RLNQLPLGAGALAGNPLGIDRE-------FLAEELGFEG-VIMNSMDAVSDRDFVVEFLFWASMVMTHLSRLAEDLIIYS 264 (464)
T ss_pred HhccCCcccchhcCCCCCccHH-------HHHHhcCCcc-cchhhhhccccchhHHHHHHHHHHHHHHHHHHhhHhheee
Confidence 999999999997 999999984 5999999998 4899999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhh------ccCccccccchhhHHHHhHHHH
Q 015619 239 SGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVG------GSNGHFELNVFKPMIASGLLHS 311 (403)
Q Consensus 239 s~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~------~~~~~~e~~~~~~~~~~~~~~~ 311 (403)
|. |||+|.+.+. .+|||+|||||||+.+|++|+++++|.|.++++++. .|+.++|.+ . ..++++
T Consensus 265 t~---EF~Fv~lSDaySTGSSlMPQKKNpDslELlRgksgrV~gdl~g~lmt~KG~PstYnkDlQeD-K-----ep~Fds 335 (464)
T KOG1316|consen 265 TK---EFGFVTLSDAYSTGSSLMPQKKNPDSLELLRGKSGRVFGDLTGLLMTLKGLPSTYNKDLQED-K-----EPLFDS 335 (464)
T ss_pred cc---ccCceeeccccccCcccCCCCCCCCHHHHhccccceehhhhHHHHHHhcCCccccccchhhh-h-----hHHHhh
Confidence 85 8999999987 899999999999999999999999999999999885 455556644 2 237899
Q ss_pred HHHHHHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCcc-----ccHHHHHH----HHHHHHHcCCCHHHHHHh--
Q 015619 312 LRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPK-----IGYDNAAA----VAKKAHKEGTTLKDAALK-- 380 (403)
Q Consensus 312 ~~~~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~-----lg~~~a~~----~~~~a~~~g~~l~e~~~~-- 380 (403)
..++.+.+++.. .++++++||+|+|.+.+.. .+++|+||++ +||+.+|+ .|..|.+.|.++.++-++
T Consensus 336 ~~tv~~~l~v~t-gv~stltvn~e~m~~aLt~-dmlATdlA~YLVrKGvPFRqtHhisG~~V~~ae~rg~~l~~Lsledl 413 (464)
T KOG1316|consen 336 SKTVSDSLQVAT-GVISTLTVNQENMEKALTP-DMLATDLAYYLVRKGVPFRQTHHISGKAVRMAEERGVTLDKLSLEDL 413 (464)
T ss_pred HHHHHHHHHHHH-HHhhheeECHHHHhhccCc-hhhHhHHHHHHHHcCCCchhhhhhhHHHHHHHHHcCCCcccCCHHHH
Confidence 999999999885 8999999999999999987 7899999986 58999875 567778888877665444
Q ss_pred --cCCCCHHHHhhcCCcccccC
Q 015619 381 --LGVLNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 381 --~~~l~~~~l~~~ldp~~~vg 400 (403)
..++=++|+-..+|.++.|.
T Consensus 414 qklsplF~eDv~~v~~ye~sVe 435 (464)
T KOG1316|consen 414 QKLSPLFEEDVFCVFNYENSVE 435 (464)
T ss_pred hhcCcccccchHHhhchhhhHH
Confidence 24555667888888877664
No 25
>PRK07492 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=3.9e-73 Score=574.77 Aligned_cols=371 Identities=19% Similarity=0.240 Sum_probs=309.3
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
+.| ||++++++|.+++... .+.+...... ...+..+|-. +++.+.+.+|+ .| .|||+|+|||
T Consensus 36 ~~g~ip~~aa~~i~~~~~~~-------~~d~~~~~~~-~~~~~h~v~a-~~~~L~~~~g~-~~-------~~vH~G~Ts~ 98 (435)
T PRK07492 36 ELGVIPKEAAETIWEKGKDA-------EFDVARIDEI-EAVTKHDVIA-FLTHLAEFVGP-DA-------RFVHQGMTSS 98 (435)
T ss_pred HcCCCCHHHHHHHHHhCccc-------CCCHHHHHHH-HHHhCCChHH-HHHHHHHHhhH-hh-------hhhcCCCChh
Confidence 679 9999999998876320 0111100000 0011222332 66788888873 23 4677889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
||+||+++|++|+.+. .+.+.|..++++|.++|++|+||+||||||+|||+|||||||+++|+++|.|+++||.+++++
T Consensus 99 Di~dTa~~L~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~ 177 (435)
T PRK07492 99 DVLDTCLNVQLVRAAD-LLLADLDRVLAALKKRAFEHKDTPTIGRSHGIHAEPTTFGLKLARFYAEFARNRERLVAAREE 177 (435)
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEEeeccCCccceehhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999996 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+|||| |+||+++++ ++++++++++|||+.++..+ ++++||+++++++++++++++|+|||+||++|+
T Consensus 178 ~~~~~lgG-AvGT~~~~~----~~~~~~~a~~LGl~~~~~~~---~v~~RD~~~e~~~~la~~~~~L~ria~Di~~l~-- 247 (435)
T PRK07492 178 IATCAISG-AVGTFANID----PRVEEHVAKKLGLKPEPVST---QVIPRDRHAMFFATLGVIASSIERLAIEIRHLQ-- 247 (435)
T ss_pred hhhccCcc-cccCCccCC----hHHHHHHHHHhCCCCCCccc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 99999987 899988776 36778999999999754432 259999999999999999999999999999999
Q ss_pred CCCcceeEEcC--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 241 PRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 241 ~~~e~gev~~~--~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
++||+||.++ ++++|||+|||||||+.+|.++++++.+.|...++ +.....+++++...|..+|..+|.+..+.+.
T Consensus 248 -~~e~~El~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a~~~~~~~~~~-~~~~~~~~eRD~~~~~~e~~~lp~~~~~~~~ 325 (435)
T PRK07492 248 -RTEVLEAEEFFSPGQKGSSAMPHKRNPVLTENLTGLARLVRSYVVPA-MENVALWHERDISHSSVERMIGPDATITLDF 325 (435)
T ss_pred -ccccchhccccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHH-HHhcchhhccCChHHHHhhhHHHHHHHHHHH
Confidence 6799999976 45899999999999999999999999999986555 4566778888877677888889988888877
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhh--hhhHHH----hhCcc-ccHHHHHHHH----HHHHHcCCCHHHHHHhc----CC
Q 015619 319 SASFEKNCVRGIQANRERISKLLHE--SLMLVT----SLNPK-IGYDNAAAVA----KKAHKEGTTLKDAALKL----GV 383 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~--~~~~~~----~la~~-lg~~~a~~~~----~~a~~~g~~l~e~~~~~----~~ 383 (403)
++..+..++++|+||++||++|++. ++.+++ .|++. +||++||+++ +++.++|.+|.|.+.++ ..
T Consensus 326 ~l~~~~~~l~~L~v~~~rm~~nl~~~~g~i~ae~~~~~L~~~g~~r~~Ah~~V~~~~~~a~~~~~~l~e~l~~~~~~~~~ 405 (435)
T PRK07492 326 ALNRLAGVIEKLVVYPENMLKNLNKFGGLVHSQRVLLALTQAGVSREDAYRLVQRNAMKVWEQGGDFLEELKADPEVRAA 405 (435)
T ss_pred HHHHHHHHHccCEECHHHHHHHHhhcCChhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHhCCHHhHhc
Confidence 7777789999999999999999986 333443 45564 8999998655 46677899999998875 47
Q ss_pred CCHHHHhhcCCcccccCCC
Q 015619 384 LNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 384 l~~~~l~~~ldp~~~vg~~ 402 (403)
++++||++++||.+|+|.+
T Consensus 406 l~~~el~~~~dp~~ylg~~ 424 (435)
T PRK07492 406 LSEEEIEELFDLGYHTKHV 424 (435)
T ss_pred CCHHHHHHHhCHHHHhcch
Confidence 8999999999999999975
No 26
>TIGR00928 purB adenylosuccinate lyase. This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP.
Probab=100.00 E-value=3.9e-73 Score=577.70 Aligned_cols=373 Identities=25% Similarity=0.293 Sum_probs=317.7
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCC-ccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHF-PLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~ 79 (403)
+.| ||+++++.|.+++ ++.... ...+ .... ..+.++ + .+|+.+++++| +.| .|||+|+||
T Consensus 36 ~~giip~~~a~~i~~~~-~~~~~d-~~~l~~~~~---~~~~~v-~----~~e~~l~~~~g-~~~-------~~vh~g~Ss 97 (435)
T TIGR00928 36 ELGVIPAEAVKEIRAKA-NFTDVD-LARIKEIEA---VTRHDV-K----AVVYALKEKCG-AEG-------EFIHFGATS 97 (435)
T ss_pred HcCCCCHHHHHHHHhhC-CCCccC-HHHHHHHHH---HHCcCh-H----HHHHHHHHHhh-hhh-------hheeecccH
Confidence 689 9999999998872 221000 0000 0000 112222 3 38899999987 444 467788999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+. .+.+.|..++++|.++|++|++++||||||+|||||||||||+++|+++|.|+++||.++++
T Consensus 98 nD~~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 176 (435)
T TIGR00928 98 NDIVDTALALLLRDALE-IILPKLKQLIDRLKDLAVEYKDTVMLGRTHGQHAEPTTLGKKFALWADEMKRQLERLLQAKE 176 (435)
T ss_pred HHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHccchHhHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+|+|| |+||++++++.+ ..+++++|++|||+.+..+| ++++||+++++++++++++++|+|||+||++|++
T Consensus 177 ~~~~~~lgG-a~Gt~~~~~~~~-~~~~~~~a~~LGl~~~~~~~---~~~~rD~~~e~~~~l~~la~~L~ria~Dl~l~s~ 251 (435)
T TIGR00928 177 RIKVGGISG-AVGTHAAAYPLV-EEVEERVTEFLGLKPVPIST---QIEPRDRHAELLDALALLATTLEKFAVDIRLLQR 251 (435)
T ss_pred HhHhhcccc-hhhhHhhccccH-HHHHHHHHHhcCCCCCCCCc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999987 899999998876 67889999999999864332 6799999999999999999999999999999994
Q ss_pred CCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHH
Q 015619 240 GPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGD 317 (403)
Q Consensus 240 ~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 317 (403)
+||+||.+|. +++|||||||||||+.+|.++++++++.|+...++ ....+++++|...|...|.+++++..+..
T Consensus 252 ---~~~~el~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~-~~~~~~~erd~~~~~~~~~~l~~~~~~~~ 327 (435)
T TIGR00928 252 ---TEHFEVEEPFGKGQVGSSAMPHKRNPIDFENVCGLARVIRSVLSPAL-ENVPLWHERDLTDSSVERIILPDSFILAD 327 (435)
T ss_pred ---ccccceecccCCCCCCcCCCCcCcCcHHHHHHHHHHHHHHHHHHHHH-HHhhHHhccCChHHHHHHHHHHHHHHHHH
Confidence 5899999885 37999999999999999999999999999987764 45578899998888888888898888888
Q ss_pred HHHHHHHhhhhcCccCHHHHHHHhhhhhhHH--Hh----hCc-cccHHHHHH----HHHHHHH-cCCCHHHHHHhc----
Q 015619 318 ASASFEKNCVRGIQANRERISKLLHESLMLV--TS----LNP-KIGYDNAAA----VAKKAHK-EGTTLKDAALKL---- 381 (403)
Q Consensus 318 ~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~--~~----la~-~lg~~~a~~----~~~~a~~-~g~~l~e~~~~~---- 381 (403)
.+..++..++++|+||++||++|+..+++++ ++ |+. .+||+.||+ +++.+.+ +|.++++.+.++
T Consensus 328 ~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~a~~la~~L~~~g~g~~~Ah~~v~~~~~~a~~~~~~~l~~~~~~~~~~~ 407 (435)
T TIGR00928 328 IMLKTTLKVVKKLVVNPENILRNLELTLGLIASERVLIALVERGMGREEAYEIVRELAMGAAEVDEPDLLEFLLADERIT 407 (435)
T ss_pred HHHHHHHHHHcCCEECHHHHHHHHHhccChHhHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHcccccHHHHHhhCccch
Confidence 8888889999999999999999999877743 33 333 589999998 4566777 899999988876
Q ss_pred CCCCHHHHhhcCCcccccCCC
Q 015619 382 GVLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 382 ~~l~~~~l~~~ldp~~~vg~~ 402 (403)
+.++++++++++||.+|+|.+
T Consensus 408 ~~l~~~~l~~~ldp~~~~~~a 428 (435)
T TIGR00928 408 KYLKEEELAELLDPETYIGNA 428 (435)
T ss_pred hhcCHHHHHHcCCHHHHhChH
Confidence 568999999999999999864
No 27
>PRK08470 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=9.6e-73 Score=573.91 Aligned_cols=367 Identities=20% Similarity=0.250 Sum_probs=309.2
Q ss_pred CCC-CCHHHHHHHHHHHH-HHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQ-EVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~ 79 (403)
++| ||++++++|.+++. ++.+- ... ....+ .+|.. ++..+.+.+|+ .| .|||+|+||
T Consensus 36 ~~G~Ip~~~a~~I~~~~~~d~~~~---~~~-----~~~~~----~dv~~-~v~~L~e~~g~-~~-------~~vH~G~Ts 94 (442)
T PRK08470 36 KLGLIPDSDCEKICKNAKFDIARI---DEI-----EKTTK----HDLIA-FLTSVSESLGE-ES-------RFVHYGMTS 94 (442)
T ss_pred HcCCCCHHHHHHHHHhcccchHHH---HHH-----HHccC----CChHH-HHHHHHHHccc-cc-------cceecCCCh
Confidence 689 99999999999873 12110 000 00112 23433 34677888763 33 467788999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
|||+||+++|++|+.+. .+.+.|..++++|.++|++|++|+||||||+|||||||||||+++|+++|.|+++||.++++
T Consensus 95 nDi~dTa~~L~lr~~l~-~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~ 173 (442)
T PRK08470 95 SDCIDTAVALQMRDSLK-LIIEDVKNLMEAIKKRALEHKDTLMVGRSHGIHGEPITFGLVLAIWYDEIKRHLKALEHTME 173 (442)
T ss_pred hchHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+|||| |+||+.+.+ .++++++|++|||+.++++| ++++||+++++++++++++++|+|||+||++|+
T Consensus 174 ~~~~~~lgG-AvGt~a~~~----~~v~~~~a~~LGl~~~~~~~---~v~~RD~~~e~~~~La~~a~~L~ria~Di~~l~- 244 (442)
T PRK08470 174 VISVGKISG-AMGNFAHAP----LELEELVCEELGLKPAPVSN---QVIQRDRYARLASALALLASSCEKIAVAIRHLQ- 244 (442)
T ss_pred HhhhhcCcc-hhcccccCC----hHHHHHHHHHcCCCCCCCCC---CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 999999987 999976543 46778999999999766776 469999999999999999999999999999999
Q ss_pred CCCCcceeEEcC--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHH
Q 015619 240 GPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGD 317 (403)
Q Consensus 240 ~~~~e~gev~~~--~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 317 (403)
++||+||.++ ++++|||||||||||+.+|.++++++++.|....+ +.....+++++...|..+|..+|.+....+
T Consensus 245 --~~E~~ev~e~~~~g~~GSS~MPhKrNPv~~E~i~~~a~~~~~~~~~~-~~~~~~~~eRD~~~~~~e~~~l~~~~~~~~ 321 (442)
T PRK08470 245 --RTEVYEAEEYFSKGQKGSSAMPHKRNPVLSENITGLCRVIRSFATPA-LENVALWHERDISHSSVERFILPDAFITTD 321 (442)
T ss_pred --ccccceecccCCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHH-HHhchHhhccCCchhHHHhhhHHHHHHHHH
Confidence 5799999986 45799999999999999999999999999996554 456677889887767778888888888888
Q ss_pred HHHHHHHhhhhcCccCHHHHHHHhhh--hhhHHHh----hCcc-ccHHHHHHHHH----HHHHc---CCC---------H
Q 015619 318 ASASFEKNCVRGIQANRERISKLLHE--SLMLVTS----LNPK-IGYDNAAAVAK----KAHKE---GTT---------L 374 (403)
Q Consensus 318 ~~~~~~~~~l~~l~v~~erm~~~l~~--~~~~~~~----la~~-lg~~~a~~~~~----~a~~~---g~~---------l 374 (403)
.++..+..++++|+||++||++|++. ++.+++. |++. +||++||++|. ++.++ |.+ |
T Consensus 322 ~~l~~~~~~l~~l~v~~~rm~~nl~~~~g~~~ae~l~~~L~~~G~~~~~Ah~~V~~~~~~a~~~~~~~~~~~~~~~~~~l 401 (442)
T PRK08470 322 FMLHRLNNVIENLVVYPENMMKNLNLTGGLVFSQRVLLELPKKGVSREDAYKIVQRNAMKVWEDLQQGKAAINEKGESLF 401 (442)
T ss_pred HHHHHHHHHHccCEECHHHHHHHHHhccChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcCCCccccccHHHH
Confidence 88888789999999999999999976 4454443 5554 88999997664 45567 899 9
Q ss_pred HHHHHhc----CCCCHHHHhhcCCcccccCCC
Q 015619 375 KDAALKL----GVLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 375 ~e~~~~~----~~l~~~~l~~~ldp~~~vg~~ 402 (403)
.+.+.++ ..+++++|+++|||..|+|.+
T Consensus 402 ~~~l~~~~~~~~~~~~~~l~~~~dp~~~~g~~ 433 (442)
T PRK08470 402 LQALLNDEDLRKSLSEEEIRACFDYSYYTKNV 433 (442)
T ss_pred HHHHhcCHHhHhcCCHHHHHHHhCHHHHHhhH
Confidence 9988765 478999999999999999975
No 28
>PRK08540 adenylosuccinate lyase; Reviewed
Probab=100.00 E-value=6.4e-73 Score=577.90 Aligned_cols=373 Identities=26% Similarity=0.312 Sum_probs=315.4
Q ss_pred CCC-CCHHHHHHHHHHHHH--HHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQE--VAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQS 78 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~--i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S 78 (403)
+.| ||++++++|.++|.+ +..+.. .. +.. ..+.++ ++ +|+.+.+++|++.| .|||+|+|
T Consensus 41 ~~Giip~~~a~~I~~~l~~~~i~~~~~-~~--~~~---~~~~~v-~~----~e~~L~~~~~~~~~-------~~vH~g~S 102 (449)
T PRK08540 41 ELGLIPEEAAEEINRKASTKYVKLERV-KE--IEA---EIHHDI-MA----VVKALSEVCEGDAG-------EYVHFGAT 102 (449)
T ss_pred HcCCCCHHHHHHHHHhcccccCCHHHH-HH--HHH---HhCCCc-HH----HHHHHHHHhhhhhh-------cceecCcc
Confidence 689 999999999999876 421100 00 001 012222 34 88899999864444 46778899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 79 SNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 79 ~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
||||++|+++|++|+.+. .+.+.|..++++|.++|++|++++||||||+|||||||||||+++|+++|.||++||.+++
T Consensus 103 ~nDi~~Ta~~L~lr~~l~-~l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 181 (449)
T PRK08540 103 SNDIIDTATALQLKDSLE-ILEEKLKKLRGVLLKKAEEHKNTVCIGRTHGQHAVPTTYGMRFAIWASEIQRHLERLEQLK 181 (449)
T ss_pred HhhHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCchhhhcCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++++.+|||| |+||+.+ .++++..+.++++++|||+.+...| ++++||++++++++++.++++|+|||+||++|+
T Consensus 182 ~~~~~~~lGg-avGt~~a-~~~~~~~i~~~~a~~LGl~~~~~~~---~~~~rd~~~e~~~~l~~~a~~l~kia~Dl~l~s 256 (449)
T PRK08540 182 PRVCVGQMTG-AVGTQAA-FGEKGIEIQKRVMEILGLKPVLISN---QVIQRDRHAEFMMFLANIATTLDKIGLEIRNLQ 256 (449)
T ss_pred Hhhheccccc-cccchhh-CCCccHHHHHHHHHHcCCCCCCCcC---CccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 9999754 4556678889999999999864433 469999999999999999999999999999999
Q ss_pred cCCCCcceeEEc--CCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHH
Q 015619 239 SGPRCGLGELIL--PENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 239 s~~~~e~gev~~--~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
++|||||.+ |++++|||||||||||+.+|.++++++++.|....+ +.....+++++...|..+|.+++.+..+.
T Consensus 257 ---~~e~gei~e~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~-~~~~~~~~~rd~~~~~~e~~~l~~~~~~~ 332 (449)
T PRK08540 257 ---RTEIGEVEEEFGKKQVGSSTMPHKRNPITSEQICGLARVVRSNVEPA-LLNNPLWDERDLTNSSCERIIFPESCVLT 332 (449)
T ss_pred ---hhhhhhhhcccCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHH-HhcchhhhccCCchhHHHHHHHHHHHHHH
Confidence 569999986 456899999999999999999999999999997665 45555567777667777888999888888
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhh--hhhHHHhh----Cc-cccHHHHHHH----HHHHHHcCCCHHHHHHhc----
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHE--SLMLVTSL----NP-KIGYDNAAAV----AKKAHKEGTTLKDAALKL---- 381 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~--~~~~~~~l----a~-~lg~~~a~~~----~~~a~~~g~~l~e~~~~~---- 381 (403)
+++..++..++++|+||++||++|+.. .+.+++++ +. .+||++||++ ++.+.++|+++++++.++
T Consensus 333 ~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la~~L~~~glg~~~Ah~~v~~l~~~a~~~g~~l~e~~~~~~~~~ 412 (449)
T PRK08540 333 DHILKLMIKVLEGLRFNPENIRRNLELTKGLIMAEAVMIELAKRGMGRQEAHELVRQAAMKAHEEGRHLKEVLLEDEEVM 412 (449)
T ss_pred HHHHHHHHHHHccCEECHHHHHHHHHHhcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhh
Confidence 888888899999999999999999874 44445444 33 5899999764 455788999999988876
Q ss_pred CCCCHHHHhhcCCcccccCCC
Q 015619 382 GVLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 382 ~~l~~~~l~~~ldp~~~vg~~ 402 (403)
+.+++++|++++||.+|+|++
T Consensus 413 ~~l~~~~l~~~ldp~~~~g~a 433 (449)
T PRK08540 413 KYLTEEELEELLDPETYIGTA 433 (449)
T ss_pred ccCCHHHHHHHcCHHHhcCch
Confidence 578999999999999999975
No 29
>PRK07380 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=6.6e-72 Score=565.18 Aligned_cols=364 Identities=20% Similarity=0.262 Sum_probs=307.8
Q ss_pred CCC-CCHHHHHHHHHHHH----HHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQ----EVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRS 76 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g 76 (403)
+.| ||++++++|.+.++ +|.+.. .....+|-.+| +.+.+.+| +.| .|||+|
T Consensus 36 ~~g~ip~~aa~~i~~~~~~d~~~i~~~~---------------~~~~h~v~a~v-~~l~~~~g-~~~-------~~vH~G 91 (431)
T PRK07380 36 ELGKIPQEAVEEIKAKANFDPQRILEIE---------------AEVRHDVIAFL-TNVNEYVG-DAG-------RYIHLG 91 (431)
T ss_pred HcCCCCHHHHHHHHhccCCCHHHHHHHH---------------HHhCCChHHHH-HHHHHHHH-Hhh-------ccccCC
Confidence 579 99999999987541 122110 11223344434 45667776 343 467788
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHh
Q 015619 77 QSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVIC 156 (403)
Q Consensus 77 ~S~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~ 156 (403)
+|||||++|+++|++|+.+. .+.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+
T Consensus 92 ~Ts~Di~dTa~~L~lr~~l~-~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~ 170 (431)
T PRK07380 92 MTSSDVLDTGLALQLVASLD-LLLEELEDLIQAIRYQAREHRNTVMIGRSHGIHAEPITFGFKLAGWLAETLRNRERLVR 170 (431)
T ss_pred CChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCeeechhcCccceechHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999996 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015619 157 CLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRL 236 (403)
Q Consensus 157 ~~~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~ 236 (403)
++++++.+|||| |+||++++++ ++.+++++.|||+.++.+| ++++||+++++++++++++++|+|||+||++
T Consensus 171 ~~~~~~~~~l~G-AvGt~~~~~~----~~~~~~a~~LGl~~~~~~~---~v~~rd~~~e~~~~la~~a~~L~kia~Di~~ 242 (431)
T PRK07380 171 LREDIAVGQISG-AVGTYANTDP----RVEAITCQKLGLKPDTAST---QVISRDRHAEYVQTLALVGASLERFATEIRN 242 (431)
T ss_pred HHHHHhccCcch-hhcCcccCCh----hHHHHHHHHcCCCCCCCCC---CccCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999975 8899888764 5677899999999764432 4699999999999999999999999999999
Q ss_pred hccCCCCcceeEEcC--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHH
Q 015619 237 LGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRL 314 (403)
Q Consensus 237 ~~s~~~~e~gev~~~--~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 314 (403)
|+ ++||+||.++ .+++|||+|||||||+.+|.++++|+.+.|...++ +.....+++++...|..+|..++.+..
T Consensus 243 l~---~~~~~el~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a~~~~g~~~~~-~~~~~~~~eRD~~~~~~e~~~l~~~~~ 318 (431)
T PRK07380 243 LQ---RTDVLEVEEYFAKGQKGSSAMPHKRNPIRSERLSGLARVLRSYAVAA-LENVALWHERDISHSSVERVMLPDCSI 318 (431)
T ss_pred hc---ccCceeecccCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHhchhhhccCchHHHHHHHHHHHHHH
Confidence 99 6799999865 45799999999999999999999999999998765 556667888887667788889999888
Q ss_pred HHHHHHHHHHhhhhcCccCHHHHHHHhh--hhhhHHHh----hCcc-ccHHHHHHHH----HHHHH-cCCCHHHHHHhc-
Q 015619 315 LGDASASFEKNCVRGIQANRERISKLLH--ESLMLVTS----LNPK-IGYDNAAAVA----KKAHK-EGTTLKDAALKL- 381 (403)
Q Consensus 315 ~~~~~~~~~~~~l~~l~v~~erm~~~l~--~~~~~~~~----la~~-lg~~~a~~~~----~~a~~-~g~~l~e~~~~~- 381 (403)
+.+.++..+..++++|+||++||++|++ .++.++++ |++. +||++||++| +++.+ +|.+|.|.+.++
T Consensus 319 ~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~~~ae~~~~~Lv~~gl~r~~Ah~~V~~~~~~a~~~~~~~l~e~l~~~~ 398 (431)
T PRK07380 319 LLHFMLREMTDLVKNLLVYPENMRRNMNIYGGVVFSQRVLLALVEKGMSREEAYRLVQKNAHTAWNTEGGNFRANLEADP 398 (431)
T ss_pred HHHHHHHHHHHHHccCEECHHHHHHHHHhcCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCHHHHHHcCh
Confidence 7788777778999999999999999996 45555443 5564 8999998655 56777 899999999876
Q ss_pred ---CCCCHHHHhhcCCcccccCCC
Q 015619 382 ---GVLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 382 ---~~l~~~~l~~~ldp~~~vg~~ 402 (403)
..++++||++++||..|+|.+
T Consensus 399 ~~~~~l~~~~l~~~~dp~~ylg~~ 422 (431)
T PRK07380 399 EVTQLLSAAELADCFDPQLHLKNL 422 (431)
T ss_pred HhhhcCCHHHHHHhhCHHHHhcch
Confidence 478999999999999999975
No 30
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=100.00 E-value=7.6e-71 Score=582.64 Aligned_cols=369 Identities=20% Similarity=0.280 Sum_probs=306.7
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCC-CCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLND-HFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~ 79 (403)
+.| ||++++++|.++++++......+ .+..++ . ..++|++||+++++++| +.| .|||+|+||
T Consensus 46 ~~Giip~~~a~~I~~~l~~~~~~~~~~~~~~~~~----~----~ed~h~~ie~~L~~~~g-~~~-------~~iH~g~S~ 109 (614)
T PRK12308 46 SVGVLSEEEQQKLELALNELKLEVMEDPEQILLS----D----AEDIHSWVEQQLIGKVG-DLG-------KKLHTGRSR 109 (614)
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCC----c----cccHHHHHHHHHHHHhc-ccc-------cceecCCCh
Confidence 689 99999999999999885321111 222222 2 34567779999999998 555 356678999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+. .+.+.|..|+++|.++|++|++|+||||||+|||||+|||||+++|+++|.||++||.++++
T Consensus 110 nD~~~Ta~~L~~r~~~~-~l~~~l~~l~~~l~~~a~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 188 (614)
T PRK12308 110 NDQVATDLKLWCRQQGQ-QLLLALDQLQQQMVNVAERHQGTVLPGYTHLQRAQPVTFAHWCLAYVEMFERDYSRLEDALT 188 (614)
T ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEeecCcCCcccEEecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 160 RMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 160 ~~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
+++.+|||||++ ||+++.++ +++|+.|||+. +..|++||+++||+++++++++++++++|+|||+||++|+
T Consensus 189 ~~~~~plGgga~agt~~~~~r-------~~~a~~LG~~~-~~~n~~da~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~s 260 (614)
T PRK12308 189 RLDTCPLGSGALAGTAYPIDR-------EALAHNLGFRR-ATRNSLDSVSDRDHVMELMSVASISMLHLSRLAEDLIFYN 260 (614)
T ss_pred HHhhCCchhccccCCCCCCCH-------HHHHHHhCCCC-CcCCHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999887 88777665 58999999997 4689999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhh--ccCccccccchhhHHHHhHHHHHHHH
Q 015619 239 SGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVG--GSNGHFELNVFKPMIASGLLHSLRLL 315 (403)
Q Consensus 239 s~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~ 315 (403)
| +|||++++++. ++|||||||||||+.+|.++++++++.|++++++.. ....+++++...+ ...+++++..+
T Consensus 261 s---~e~g~~el~~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd~~~~--~~~l~~~~~~~ 335 (614)
T PRK12308 261 S---GESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGALAGMMMTVKALPLAYNKDMQED--KEGLFDALDTW 335 (614)
T ss_pred C---CCcCCEEeCccCCCccccCcCccCCcHHHHHHHHHHHHhhHHHHHHHHHcCCchhhccchhhh--HHHHHHHHHHH
Confidence 6 48998888876 799999999999999999999999999999888753 3333455543333 12355566666
Q ss_pred HHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCc-----cccHHHHHHHHH----HHHHcCCCHHHHHHhc-----
Q 015619 316 GDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNP-----KIGYDNAAAVAK----KAHKEGTTLKDAALKL----- 381 (403)
Q Consensus 316 ~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~-----~lg~~~a~~~~~----~a~~~g~~l~e~~~~~----- 381 (403)
..++. ++..++++|+||++||++|+..++.+++++++ .+||++||++|. .+.++|++|.+++.++
T Consensus 336 ~~~l~-~~~~~l~~l~v~~~rm~~~~~~g~~~a~~la~~L~~~g~~~r~Ah~~v~~~v~~a~~~g~~l~~~~~~~~~~~~ 414 (614)
T PRK12308 336 NDCME-MAALCFDGIKVNGERTLEAAKQGYANATELADYLVAKGIPFREAHHIVGVAVVGAIAKGCALEELSLEQLKEFS 414 (614)
T ss_pred HHHHH-HHHHHhCcCEECHHHHHHHHHcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhhCCHHHHHHhh
Confidence 55555 55799999999999999999998888877654 479999986555 4778899999876553
Q ss_pred CCCCH-----HHHhhcCCcccccCC
Q 015619 382 GVLNS-----EEFDNLVVPEKMIGP 401 (403)
Q Consensus 382 ~~l~~-----~~l~~~ldp~~~vg~ 401 (403)
..+++ .+++..++|+.++|.
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~G~ 439 (614)
T PRK12308 415 DVIEDDVYQILTIESCLEKRCALGG 439 (614)
T ss_pred hhhhHHHHHhCCHHHHHHhccCCCC
Confidence 34555 446677788888875
No 31
>PRK06390 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.8e-70 Score=559.38 Aligned_cols=374 Identities=21% Similarity=0.253 Sum_probs=309.2
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.+++++...+... +.......+.|+ + .++..+.+.+| +.| .|+|+|+|||
T Consensus 41 ~~Giip~~~a~~I~~~l~~~~~d~~~----~~~~~~~~~~dv-~----~~~~~L~~~~g-~~~-------~~iH~G~Ssn 103 (451)
T PRK06390 41 EYGIIPRDAFLDIKNAVDSNSVRLER----VREIESEIKHDV-M----ALVEALSEQCS-AGK-------NYVHFGVTSN 103 (451)
T ss_pred HcCCCCHHHHHHHHHhcccccCCHHH----HHHHHHHhCCCc-H----HHHHHHHHHhh-hhh-------hheecCccHh
Confidence 689 9999999999998653221100 000001112333 3 38889999987 444 4566789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .+.+.|..|+++|.++|++|++|+||||||+|||||||||||+++|+++|.|+++||.+++++
T Consensus 104 Di~~Ta~~L~lr~~l~-~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~r 182 (451)
T PRK06390 104 DINDTATALQIHDFVS-IIKDDIKNLMETLIKLIDEYKDSPMMGRTHGQHASPITFGLKFAVYLDEMSRHLDRLTEMGDR 182 (451)
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCchhhhhCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+++|| |+||+...... ...+++++|++|||+.+.. .+++++||+++++++++++++++|+|||+||++|+|.
T Consensus 183 ~~~~~~~g-avGt~a~~g~~-~~~~~~~~a~~LGl~~~~~---~~~~~~rD~~~e~~~~l~~la~~l~kia~Di~l~ss~ 257 (451)
T PRK06390 183 AFAGKVLG-PVGTGAALGKD-ALDIQNRVMEILGIYSEIG---STQIVNRDRYIEYLSVINGISVTLEKIATEIRNLQRP 257 (451)
T ss_pred hhhhccCC-hhcChhhCCCc-HHHHHHHHHHHcCCCCCCC---ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999998 99997765433 5678899999999997533 2367999999999999999999999999999999964
Q ss_pred CCCcceeEE--cCC-CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHH
Q 015619 241 PRCGLGELI--LPE-NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGD 317 (403)
Q Consensus 241 ~~~e~gev~--~~~-~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 317 (403)
|||||. +++ +++|||||||||||+.+|.+++++..+.+... ..+.....+++++...+..+|..+|.+..+.+
T Consensus 258 ---e~g~v~E~~~~~~~~GSSiMP~KrNPv~~E~i~~~a~~~~~l~~-~~~~~~~~~~erd~~~~~~e~~~~~~~~~~~~ 333 (451)
T PRK06390 258 ---EIDEVSEYFDEESQVGSSSMPSKVNPINSENVVSLSRFIRSLII-PEYEAGVTWHERDLTNSALERFTIPYASILID 333 (451)
T ss_pred ---ccchhhcccccCCCCCccCCCCCCCcHHHHHHHHHHHHHHHhHH-HHHHhhhHhhccCCcchHHHHhhHHHHHHHHH
Confidence 789986 334 68999999999999999999999976666544 44555556677776667777877888877788
Q ss_pred HHHHHHHhhhhcCccCHHHHHHHhhhhhhH-----HHhhCcc-ccHHHHHHHH----HHHHHcCCCHHHHHHhc---CCC
Q 015619 318 ASASFEKNCVRGIQANRERISKLLHESLML-----VTSLNPK-IGYDNAAAVA----KKAHKEGTTLKDAALKL---GVL 384 (403)
Q Consensus 318 ~~~~~~~~~l~~l~v~~erm~~~l~~~~~~-----~~~la~~-lg~~~a~~~~----~~a~~~g~~l~e~~~~~---~~l 384 (403)
.++..+..++++|+||++||++|++.++.+ ++.|++. +||++||+++ +++.++|+++++++.++ +.+
T Consensus 334 ~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~se~la~~L~~~G~~~~~Ah~~v~~~~~~a~~~g~~l~~~~~~~~~~~~l 413 (451)
T PRK06390 334 YVLYNMNDVLSHLIIKEDEIRRNLESDDSIMSESIVRALTLSGMPRQDAHEFVRRASMEARSNGKSLKSSLIEAGILKYI 413 (451)
T ss_pred HHHHHHHHHHcCCEECHHHHHHHHhccchhhHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhcC
Confidence 888888899999999999999999984443 3456664 8999998654 45777899999988775 348
Q ss_pred CHHHHhhcCCcccccCCC
Q 015619 385 NSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 385 ~~~~l~~~ldp~~~vg~~ 402 (403)
++++|++++||.+|+|++
T Consensus 414 ~~~~l~~~ldP~~~i~~a 431 (451)
T PRK06390 414 DEKTLDRAMDPANFIGQA 431 (451)
T ss_pred CHHHHHHhcCHHHHhhhh
Confidence 999999999999999864
No 32
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=4.2e-70 Score=542.36 Aligned_cols=368 Identities=26% Similarity=0.349 Sum_probs=322.3
Q ss_pred CCC-CCHHHHHHHHHHHH-------HHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCccccccccc
Q 015619 2 EYG-LDPAIGKAIMQAAQ-------EVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHV 73 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~-------~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~v 73 (403)
+.| ||+++++.|.+.+. +|.+.. ..++.+|-. +...+.+.+|++. +.||
T Consensus 36 elG~Ip~~a~~~I~~~~~~~~~d~~~i~eie---------------~~t~HdV~a-~v~~l~e~~~~~~-------~~~V 92 (438)
T COG0015 36 ELGVIPAEAAAEIDAAAAFAEFDLERIKEIE---------------AETGHDVKA-LVRALAEKVGEEA-------SEYV 92 (438)
T ss_pred HhCCCCHHHHHHHHHHhcccccCHHHHHHHH---------------HHhCCCcHH-HHHHHHHhcCccc-------ccce
Confidence 689 99999999999853 333211 112334444 4457777777433 3578
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHH
Q 015619 74 NRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDR 153 (403)
Q Consensus 74 h~g~S~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~r 153 (403)
|+|.|||||+||++.|++++.+. .|.+.+.++++.|.++|.+|+++||+||||+|||+|||||++++.|++++.|+++|
T Consensus 93 H~GaTS~DI~Dta~~L~lk~a~~-ii~~~l~~l~~~L~~~A~~~k~t~m~GRTHgq~A~PtT~G~k~A~w~~el~R~~~r 171 (438)
T COG0015 93 HFGATSQDIIDTALALQLKEALD-LILPDLKRLIEALAELALEHKDTPMLGRTHGQPAEPTTFGKKFANWLAELLRHLER 171 (438)
T ss_pred ecccchHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCeecccccCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999997 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHH
Q 015619 154 VICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIAND 233 (403)
Q Consensus 154 L~~~~~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~D 233 (403)
|.++.+++..+.+|| |+||..+ .++.+.++++++++.|||+.++.++ |+.+||++++|+++|++++++|.|||.|
T Consensus 172 L~~~~~~~~~g~i~G-a~Gt~Aa-~~~~~~~ve~~v~e~LGL~~~p~st---q~~~RD~~ae~~~~La~i~~sl~k~a~d 246 (438)
T COG0015 172 LEEAEERIIVGKIGG-AVGTLAA-LGDLGAEVEERVAEKLGLKPAPIST---QVSPRDRIAEFFSALALLAGSLEKFARD 246 (438)
T ss_pred HHHHHhhhhhhcccc-chhhHhh-cCchhHHHHHHHHHHcCCCCCCCCc---ccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 9999665 5566789999999999999777766 7999999999999999999999999999
Q ss_pred HHHhccCCCCcceeEEcC--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHH
Q 015619 234 VRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHS 311 (403)
Q Consensus 234 l~~~~s~~~~e~gev~~~--~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 311 (403)
|++|+ ++|++||.+| ++++|||+||||+||+.+|.+.++++.+.++...++ .....||||+...|..+|..+|.
T Consensus 247 Ir~l~---~~e~~Ev~E~f~~gq~GSSaMPHKrNPi~~E~~~glar~~r~~~~~~~-e~~~~whERdlt~ssver~~Lp~ 322 (438)
T COG0015 247 IRLLQ---RTEVGEVEEPFAKGQVGSSAMPHKRNPIDSENVTGLARVARALVSTLL-ENLVLWHERDLTDSSVERVILPD 322 (438)
T ss_pred HHHHH---hccccccccccCCCCCCCCCCCcccCcHHHHHHHHHHHHHHHHHHHHH-HHhHHHHhccccchHHHHHHHHH
Confidence 99999 7899999998 468999999999999999999999999999877774 44589999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHH------HhhCc-cccHHHHHHHHH----HHHHcCCCHHHHHHh
Q 015619 312 LRLLGDASASFEKNCVRGIQANRERISKLLHESLMLV------TSLNP-KIGYDNAAAVAK----KAHKEGTTLKDAALK 380 (403)
Q Consensus 312 ~~~~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~------~~la~-~lg~~~a~~~~~----~a~~~g~~l~e~~~~ 380 (403)
.+.+.+.++.....++++|.||+++|.+|++..++++ .++.+ .+||++||++++ .+.+++++|.+.+.+
T Consensus 323 ~~~~~~~aL~~~~~vl~~L~v~~~~m~~nL~~~~gli~se~v~~~l~~~g~~Re~a~elvr~~a~~~~~~~~~~~~~~l~ 402 (438)
T COG0015 323 AFIAADGALNRLLNVLEGLEVNPERMRRNLDLTLGLIASERVMLALRKKGMGREEAHELVREKAMKAWEQGKEFLELLLA 402 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCeeCHHHHHHHHhhccchhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccchHHHhcc
Confidence 9999999999888999999999999999999888764 23555 689999998775 466788999777666
Q ss_pred c----CCCCHHHHhhcCCcccccCCC
Q 015619 381 L----GVLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 381 ~----~~l~~~~l~~~ldp~~~vg~~ 402 (403)
+ .+++++++++++||.+|+|.+
T Consensus 403 ~~~v~~~~~~~~~~~~~dp~~y~G~a 428 (438)
T COG0015 403 DERVTKYLSEEELLELLDPANYLGRA 428 (438)
T ss_pred chhhhccCcHHHHHHcCCHHHHhhHH
Confidence 4 589999999999999999975
No 33
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like. This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked t
Probab=100.00 E-value=7.6e-71 Score=552.31 Aligned_cols=338 Identities=25% Similarity=0.303 Sum_probs=291.7
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
+.| ||++++++|.++++.+..+. ..-+.... ..+ .++ ..+|+++++++|++.| .|||+|+|||
T Consensus 27 ~~giip~~~a~~i~~~l~~~~~d~-~~~~~~~~---~~~----~~v-~~~e~~L~~~~g~~~~-------~~vH~g~S~n 90 (381)
T cd01595 27 ELGLIPKEAAEEIRAAADVFEIDA-ERIAEIEK---ETG----HDV-IAFVYALAEKCGEDAG-------EYVHFGATSQ 90 (381)
T ss_pred HcCCCCHHHHHHHHHhhhcccCCH-HHHHHHHH---HhC----cCc-HHHHHHHHHHhhhHhh-------hHeecCcCHH
Confidence 689 99999999999998763211 11001111 112 233 3489999999985454 4666789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .+.+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++
T Consensus 91 Di~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~~~~dt~m~grTH~Q~A~P~T~G~~~~~~~~~L~r~~~rL~~~~~~ 169 (381)
T cd01595 91 DINDTALALQLRDALD-IILPDLDALIDALAKLALEHKDTPMLGRTHGQHALPTTFGKKFAVWAAELLRHLERLEEARER 169 (381)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCChHHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhh-hchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALA-AHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~-~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++.+|||| |+||+.+..+ +++.+++++|++|||..+ .++|+. +||+++++++++++++++|+|||+||++|+|
T Consensus 170 ~~~~~lGg-a~G~g~~~~~-~~~~~~~~~a~~LGl~~~----~~~~~~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~s 243 (381)
T cd01595 170 VLVGGISG-AVGTHASLGP-KGPEVEERVAEKLGLKVP----PITTQIEPRDRIAELLSALALIAGTLEKIATDIRLLQR 243 (381)
T ss_pred chhhhccc-HhhhHhhcCC-cHHHHHHHHHHHcCCCCC----CCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998 8888766533 677889999999999643 345655 9999999999999999999999999999996
Q ss_pred CCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHH
Q 015619 240 GPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGD 317 (403)
Q Consensus 240 ~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 317 (403)
+|||||.+|. +++|||||||||||+.+|.++++++++.|++.+++... .++++++...|..+|..++++..+..
T Consensus 244 ---~e~gev~~~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~~erd~~~~~~~~~~l~~~~~~~~ 319 (381)
T cd01595 244 ---TEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPALENL-VQWHERDLSDSSVERNILPDAFLLLD 319 (381)
T ss_pred ---ccccceeccccCCCCCCccCCCcCCcHHHHHHHHHHHHHHHHHHHHHHhh-hHhhccCCcHHHHHHHHHHHHHHHHH
Confidence 5999999996 38999999999999999999999999999998886544 88899998888888999999999999
Q ss_pred HHHHHHHhhhhcCccCHHHHHHHhhhhhh------HHHhhCcc-ccHHHHHHHHHH
Q 015619 318 ASASFEKNCVRGIQANRERISKLLHESLM------LVTSLNPK-IGYDNAAAVAKK 366 (403)
Q Consensus 318 ~~~~~~~~~l~~l~v~~erm~~~l~~~~~------~~~~la~~-lg~~~a~~~~~~ 366 (403)
+++.+...++++|+||++||++|+..+++ +++.|++. +||++||+++.+
T Consensus 320 ~~l~~~~~~l~~l~v~~~~m~~~l~~~~g~~~ae~~~~~L~~~g~g~~~Ah~~v~~ 375 (381)
T cd01595 320 AALSRLQGLLEGLVVNPERMRRNLDLTWGLILSEAVMMALAKKGLGRQEAYELVKE 375 (381)
T ss_pred HHHHHHHHHHcCCEECHHHHHHHHHhccCHHHHHHHHHHHHHhCCCHhHHHHHHHH
Confidence 99999899999999999999999998663 23456676 999999999876
No 34
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=2.6e-69 Score=548.32 Aligned_cols=369 Identities=17% Similarity=0.155 Sum_probs=310.1
Q ss_pred CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChhhHHH
Q 015619 5 LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFP 84 (403)
Q Consensus 5 i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~nD~~~ 84 (403)
||++.++.|.+++.++ .+..... ....+..+|..++ ..+.+++| +.| .|||+|+||||+++
T Consensus 41 ip~~~a~~i~~~~~~~---------d~~~i~~-~e~~~~hdv~a~~-~~l~~~~~-~~~-------~~vH~G~TS~Di~d 101 (436)
T cd03302 41 ISDEQIEEMKANVENI---------DFEIAAA-EEKKLRHDVMAHV-HAFGLLCP-AAA-------GIIHLGATSCFVTD 101 (436)
T ss_pred CCHHHHHHHHHhhhcC---------CHHHHHH-HHHHhCcCchHHH-HHHHHHhH-hcc-------CeeeeCcCHHHHHH
Confidence 7999999998876211 0000000 0111234455544 46788876 344 46677899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 015619 85 TVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQL 164 (403)
Q Consensus 85 Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~ 164 (403)
|+..|++|+.+. .+.+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+
T Consensus 102 ta~~L~lr~a~~-~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~~a~~~~~L~r~~~RL~~~~~~~~~~ 180 (436)
T cd03302 102 NTDLIQIRDALD-LILPKLAAVIDRLAEFALEYKDLPTLGFTHYQPAQLTTVGKRACLWIQDLLMDLRNLERLRDDLRFR 180 (436)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCeeeccccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999996 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCC------CCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 165 AQGGTAVGTGL------NTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 165 ~lGg~a~Gt~~------~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++|| ++||+. +.++..+.+++++++++|||+.+ . +..+++++||+++++++++++++++|+|||+||++|+
T Consensus 181 ~~~G-avGt~a~~~~~~~~dr~~~~~v~~~~a~~LGl~~~-~-~~~~~v~~rD~~~e~~~~la~~a~~L~riA~Dl~l~~ 257 (436)
T cd03302 181 GVKG-TTGTQASFLDLFEGDHDKVEALDELVTKKAGFKKV-Y-PVTGQTYSRKVDIDVLNALSSLGATAHKIATDIRLLA 257 (436)
T ss_pred cCcC-hhhhhHHHHhcCCchHHHHHHHHHHHHHHcCCCCC-C-CchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9997 788853 23333457888999999999975 2 3333579999999999999999999999999999999
Q ss_pred cCCCCcceeEEcC--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHH
Q 015619 239 SGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 239 s~~~~e~gev~~~--~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
| +|||.+| .+++|||||||||||+.+|.++++|+++.|++.+++.....+++|+|...|...|..++++..+.
T Consensus 258 s-----~~el~e~~~~g~~GSS~MPhKrNPv~~E~i~~~a~~~~g~~~~~~~~~~~~~~Erd~~~~~~~~~~l~~~~~~~ 332 (436)
T cd03302 258 N-----LKEVEEPFEKGQIGSSAMPYKRNPMRSERCCSLARHLMNLASNAAQTASTQWFERTLDDSANRRIAIPEAFLAA 332 (436)
T ss_pred h-----CceecccccCCCCCcccCCCccCcHHHHHHHHHHHHHHhhHHHHHHHhhccccccCCchhHHHHHHHHHHHHHH
Confidence 4 8999998 45899999999999999999999999999999998778889999999999999999999999999
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhh--HH----HhhCcc-ccHHHHHHHHH----HHHHc------CCCHHHHHH
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLM--LV----TSLNPK-IGYDNAAAVAK----KAHKE------GTTLKDAAL 379 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~--~~----~~la~~-lg~~~a~~~~~----~a~~~------g~~l~e~~~ 379 (403)
+.++.++..++++|+||++||++|++.+.+ ++ ..|++. +||++||++|. ++.++ |.+|+|.+.
T Consensus 333 ~~~l~~~~~~l~~l~v~~~rm~~~l~~~~g~~~se~~~~~L~~~g~~~~~Ah~~v~~~~~~~~~~~~~~~~~~~~~~~l~ 412 (436)
T cd03302 333 DAILITLQNISEGLVVYPKVIERHIRQELPFMATENIIMAAVKAGGDRQDAHERIRVLSHQAAAVVKQEGGDNDLIERIK 412 (436)
T ss_pred HHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHh
Confidence 999999999999999999999999998744 32 235564 89999997665 56678 999999998
Q ss_pred hcCC--CCHHHHhhcCCcccccCC
Q 015619 380 KLGV--LNSEEFDNLVVPEKMIGP 401 (403)
Q Consensus 380 ~~~~--l~~~~l~~~ldp~~~vg~ 401 (403)
+++. -++++|++++||..|+|.
T Consensus 413 ~~~~~~~~~~~l~~~~dp~~~~g~ 436 (436)
T cd03302 413 NDAYFKPIWDELDALLDPKTFIGR 436 (436)
T ss_pred cCCCcCCCHHHHHHHhCHHhhhCc
Confidence 8642 188899999999999984
No 35
>PRK02186 argininosuccinate lyase; Provisional
Probab=100.00 E-value=2.2e-69 Score=593.14 Aligned_cols=350 Identities=19% Similarity=0.215 Sum_probs=301.0
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.+++.++.+... ..+..++ ..+|.|++ ||+++++++|++.|+ |+|+|||||
T Consensus 454 ~~gii~~~~a~~I~~~l~~~~~~~~-~~~~~~~----~~~~~~~~----~e~~L~~~~g~~~~~-------~lH~grSrn 517 (887)
T PRK02186 454 DTGIVAPERARPLLDAHRRLRDAGF-APLLARP----APRGLYML----YEAYLIERLGEDVGG-------VLQTARSRN 517 (887)
T ss_pred HCCCCCHHHHHHHHHHHHHHHHhHH-hhCcCCC----CCcchHHH----HHHHHHHHhChhhhc-------ccCccccHH
Confidence 689 999999999999988854322 3444444 24556666 999999999865553 455779999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
||++|+++|++|+++. .+.+.|..|+++|.++|++|++|+||||||+|||||||||||+++|+++|.||++||.+++++
T Consensus 518 D~v~T~~~l~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~~~m~g~TH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~r 596 (887)
T PRK02186 518 DINATTTKLHLREATS-RAFDALWRLRRALVFKASANVDCALPIYSQYQPALPGSLGHYLLAVDGALARETHALFALFEH 596 (887)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEeecCccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++.|||||+|. ||++++++ +++|++|||+. +..|++||+++||+++++++++++++++|+|||+||++|+|
T Consensus 597 ~~~~plG~aag~gt~~~~~~-------~~~a~~LGf~~-~~~n~~da~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~~ 668 (887)
T PRK02186 597 IDVCPLGAGAGGGTTFPIDP-------EFVARLLGFEQ-PAPNSLDAVASRDGVLHFLSAMAAISTVLSRLAQDLQLWTT 668 (887)
T ss_pred hCcCCcccccccCCCCCCCH-------HHHHHHcCCCC-CccCHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999774 77777665 57999999997 57899999999999999999999999999999999999996
Q ss_pred CCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHH-hHHHHHHHHHH
Q 015619 240 GPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIAS-GLLHSLRLLGD 317 (403)
Q Consensus 240 ~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~ 317 (403)
+|||||.+|+. ++|||||||||||+.+|.+|++++++.|+++++++..++.+++++...+...+ .+++++..+.+
T Consensus 669 ---~e~g~i~~~~~~~~gSSiMPqKrNP~~~E~ir~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 745 (887)
T PRK02186 669 ---REFALVSLPDALTGGSSMLPQKKNPFLLEFVKGRAGVVAGALASASAALGKTPFSNSFEAGSPMNGPIAQACAAIED 745 (887)
T ss_pred ---CCCCcEECCCccccccCCCCCCCCCcHHHHHHHHHHHHhhHHHHHHHHHccCCcccccchhhhhHHHHHHHHHHHHH
Confidence 59999999986 79999999999999999999999999999999887888888886644333333 45666677766
Q ss_pred HHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCc------cccHHHHHHHHH----HHHHcCCCHHHHHHh
Q 015619 318 ASASFEKNCVRGIQANRERISKLLHESLMLVTSLNP------KIGYDNAAAVAK----KAHKEGTTLKDAALK 380 (403)
Q Consensus 318 ~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~------~lg~~~a~~~~~----~a~~~g~~l~e~~~~ 380 (403)
++..+ ..++++|+||++||++++..++++++++++ .+||++||++|. .+.++|.++.+.+.+
T Consensus 746 ~l~~~-~~~l~~l~v~~~rm~~~~~~~~~~at~la~~L~~~~g~~fr~Ah~~v~~~v~~~~~~~~~~~~~~~~ 817 (887)
T PRK02186 746 AAAVL-VLLIDGLEADQARMRAHLEDGGVSATAVAESLVVRRSISFRSAHTQVGQAIRQSLDQGRSSADALAA 817 (887)
T ss_pred HHHHH-HHHHhhCEECHHHHHHHHhcCcchHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcCCcccchHHH
Confidence 66655 589999999999999999999998887653 389999997654 466778777776554
No 36
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=6.6e-69 Score=538.44 Aligned_cols=332 Identities=22% Similarity=0.271 Sum_probs=278.4
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
+.| ||++++++|.++|+.+.+.. ..+ .. ..+.++ ++ +|..+.+++|+ .| .|||+|+|||
T Consensus 33 ~~Glip~~~a~~I~~~l~~~~~~~--~~~--~~---~~~~dv-~~----~e~~L~~~~g~-~~-------~~lH~G~S~n 92 (387)
T cd01360 33 KLGVIPAEAAEEIRKKAKFDVERV--KEI--EA---ETKHDV-IA----FVTAIAEYCGE-AG-------RYIHFGLTSS 92 (387)
T ss_pred HcCCCCHHHHHHHHHHhhcCHHHH--HHH--HH---HhCCCh-HH----HHHHHHHHHHH-hh-------hheeCCCChh
Confidence 689 99999999999986433211 011 11 112222 23 77889998873 43 4677889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
||++|+++|++|+.+. .+.+.|.+++++|.++|++|++|+||||||+|||||||||||+++|+++|.||++||.+++++
T Consensus 93 Di~~ta~~L~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~l~~~~~~L~r~~~rL~~~~~~ 171 (387)
T cd01360 93 DVVDTALALQLREALD-IILKDLKELLEVLKKKALEHKDTVMVGRTHGIHAEPTTFGLKFALWYAEFKRHLERLKEARER 171 (387)
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCeeehhhcCCcceeehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+|||| |+||+.+.+ ..++++++++|||+.++..| ++++||+++++++++++++++|+|||+||++|++
T Consensus 172 ~~~~~lgg-a~Gt~~~~~----~~~~~~~a~~LG~~~~~~~~---~~~~rD~~~e~~~~la~~~~~L~ria~Dl~~~s~- 242 (387)
T cd01360 172 ILVGKISG-AVGTYANLG----PEVEERVAEKLGLKPEPIST---QVIQRDRHAEYLSTLALIASTLEKIATEIRHLQR- 242 (387)
T ss_pred hHhhccch-HhhcCccCC----HHHHHHHHHHcCCCCCCCCC---cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 99999997 788876543 34678999999999865443 5699999999999999999999999999999995
Q ss_pred CCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 241 PRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 241 ~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
+|||||.+|. +++|||||||||||+.+|.++++++++.|...++ +.....+++++...+..+|..++.+......
T Consensus 243 --~e~gel~e~~~~~~~GSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~-~~~~~~~~~rd~~~~~~~~~~l~~~~~~~~~ 319 (387)
T cd01360 243 --TEVLEVEEPFSKGQKGSSAMPHKRNPILSENICGLARVIRSNVIPA-LENVALWHERDISHSSVERVILPDATILLDY 319 (387)
T ss_pred --ccccceecCCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HhhhHHhcCCCcchhHHHHHHHHHHHHHHHH
Confidence 5899999883 5799999999999999999999999999998654 4455566777766666677788877777777
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhh--hhhHHHhh----Ccc-ccHHHHHHHHHH
Q 015619 319 SASFEKNCVRGIQANRERISKLLHE--SLMLVTSL----NPK-IGYDNAAAVAKK 366 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~--~~~~~~~l----a~~-lg~~~a~~~~~~ 366 (403)
++..+..++++|+||++||++|+.. ++.+++++ ++. +||++||++|.+
T Consensus 320 ~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la~~L~~~g~~~r~Ah~~V~~ 374 (387)
T cd01360 320 ILRRMTRVLENLVVYPENMRRNLNLTKGLIFSQRVLLALVEKGMSREEAYEIVQR 374 (387)
T ss_pred HHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 7777789999999999999999986 55555554 443 899999999887
No 37
>PRK06389 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3.5e-68 Score=531.93 Aligned_cols=334 Identities=15% Similarity=0.109 Sum_probs=283.9
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++++++.+ +.|++++. .||+|++ ||+++++++| ++|+ ++|+| ||||
T Consensus 48 ~~gii~~~e~~~i~~~L~~i~~----~~~~~~~~----~EDvh~~----iE~~L~~~~G-~~gg-~lhtg------RSRN 107 (434)
T PRK06389 48 QRRLITEKAPKCVINALIDIYK----NGIEIDLD----LEDVHTA----IENFVIRRCG-DMFK-NFRLF------LSRN 107 (434)
T ss_pred HCCCCCHHHHHHHHHHHHHHHc----CCCcCCCC----CCchHHH----HHHHHHHHhc-hhhh-hhccc------CCHH
Confidence 689 999999999999999975 55777763 4666776 9999999999 6774 57765 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
||+.|++|||+|+++. .+...+..++++|+++ |.|++||||||+|+|||+|||||+++|+++|.||++||.+++++
T Consensus 108 Dqvat~~RL~~r~~~~-~~~~~l~~l~~~l~~~---~~dtimpGyTHlQ~AqP~TfG~~l~a~a~~L~rd~~RL~~~~~r 183 (434)
T PRK06389 108 EQVHADLNLFIIDKII-EIEKILYEIIKVIPGF---NLKGRLPGYTHFRQAMPMTVNTYINYIKSILYHHINNLDSFLMD 183 (434)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH---ccCceeccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 9999999999999965 99999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchH-HHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 161 MYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDA-FVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 161 ~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~-~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++.||||+|+. ||++++++ +++|++|||+.+ ..|++++..++|+ ++++++++++++++|+|||+|+++|+
T Consensus 184 ~~~~pLGaga~~Gt~~~idr-------~~~A~lLGf~~~-~~n~~~a~~~~~~~~~e~~~~la~la~~LsRiA~Dl~l~s 255 (434)
T PRK06389 184 LREMPYGYGSGYGSPSSVKF-------NQMSELLGMEKN-IKNPVYSSSLYIKTIENISYLISSLAVDLSRICQDIIIYY 255 (434)
T ss_pred HhhcchhhhhhhcCCchhhH-------HHHHHHhCCCCC-CCCCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999987775 99887754 689999999984 7888888777655 88999999999999999999999999
Q ss_pred cCCCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHH
Q 015619 239 SGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGD 317 (403)
Q Consensus 239 s~~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 317 (403)
|. |++++|+. ++|||||||||||+.+|.++++|+++.|.+++++....+.++.++-........+++.++.+.+
T Consensus 256 s~-----g~ielpd~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~n~~~~y~~D~q~~~~~~~~~~~~~~~ 330 (434)
T PRK06389 256 EN-----GIITIPDEFTTGSSLMPNKRNPDYLELFQGIAAESISVLSFIAQSELNKTTGYHRDFQIVKDSTISFINNFER 330 (434)
T ss_pred CC-----CEEEecCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 62 78889987 8999999999999999999999999999998887644433332221111113457888888888
Q ss_pred HHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCcc-----ccHHHHHHHHHHHHHcCCCHH
Q 015619 318 ASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPK-----IGYDNAAAVAKKAHKEGTTLK 375 (403)
Q Consensus 318 ~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~-----lg~~~a~~~~~~a~~~g~~l~ 375 (403)
++..+ ..++++++||++| ++.+. +..++|++|+. ++||+||++|-.++.++.-+.
T Consensus 331 ~l~l~-~~~i~~l~~~~~~-~~a~~-~~~~ATdlA~~lv~~GipFR~AH~~Vg~~V~~~~~~~ 390 (434)
T PRK06389 331 ILLGL-PDLLYNIKFEITN-EKNIK-NSVYATYNAWLAFKNGMDWKSAYAYIGNKIREGEVLD 390 (434)
T ss_pred HHHHH-HHHHHhCeECHHH-Hhhcc-CCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhccchh
Confidence 88887 4899999999999 55554 44558888753 699999999999888877643
No 38
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions. The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits.
Probab=100.00 E-value=3.5e-67 Score=515.95 Aligned_cols=307 Identities=37% Similarity=0.470 Sum_probs=259.9
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
+.| ||+++++.|.++|+++..+.....+ .+.+..++.+++ +|+.+.+++|++. ++|||+|+|||
T Consensus 17 ~~Gli~~~~a~~I~~~l~~~~~~~~~~~~----~~~~~~~~~~~~----~e~~l~~~~g~~~-------~~~lH~G~S~n 81 (325)
T cd01334 17 ELGLLPKEAAEAILAALDEILEGIAADQV----EQEGSGTHDVMA----VEEVLAERAGELN-------GGYVHTGRSSN 81 (325)
T ss_pred HCCCCCHHHHHHHHHHHHHHHhCccccCe----eeCCCCccHHHH----HHHHHHHHhcccc-------CCCCccCCCCc
Confidence 689 9999999999999998765332221 234456666777 8888899988643 35677889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .+.+.|.+++++|.++|++|++|+||||||+|||||||||||+++|+++|.|+++||.+++++
T Consensus 82 Di~~ta~~l~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (325)
T cd01334 82 DIVDTALRLALRDALD-ILLPALKALIDALAAKAEEHKDTVMPGRTHLQDAQPTTLGHELAAWAAELERDLERLEEALKR 160 (325)
T ss_pred cHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCcEeecccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+|||+||+|++.... +.+++++|+.|||.. +..|++|++++||+++++++++++++++|+|||+|+++|+|
T Consensus 161 ~~~~~lG~gA~g~~~~~~----~~~~~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~~- 234 (325)
T cd01334 161 LNVLPLGGGAVGTGANAP----PIDRERVAELLGFFG-PAPNSTQAVSDRDFLVELLSALALLAVSLSKIANDLRLLSS- 234 (325)
T ss_pred hhhcCCcHhHHhCcCCCC----cchHHHHHHHhcCcC-cCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 999999977997754432 344579999999965 46899999999999999999999999999999999999995
Q ss_pred CCCcceeEEcCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 241 PRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 241 ~~~e~gev~~~~~-~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+|||||.+|+. ++|||||||||||+.+|.++++++++.|...++.....+.+++.+ ..+...|..++.+.......
T Consensus 235 --~e~gev~~~~~~~~gSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~ 311 (325)
T cd01334 235 --GEFGEVELPDAKQPGSSIMPQKVNPVILELVRGLAGRVIGNLAALLEALKGGPLEDN-VDSPVEREALPDSFDLLDAA 311 (325)
T ss_pred --CCCCeEECCCCCCCCcccCCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHhcCchhhh-cccHHHHHHHHHHHHHHHHH
Confidence 49999999987 899999999999999999999999999999888766666555533 33444555555554444444
Q ss_pred HHHHHhhhhcCccC
Q 015619 320 ASFEKNCVRGIQAN 333 (403)
Q Consensus 320 ~~~~~~~l~~l~v~ 333 (403)
+.....++++|+||
T Consensus 312 l~~~~~~~~~l~v~ 325 (325)
T cd01334 312 LRLLTGVLEGLEVN 325 (325)
T ss_pred HHHHHHHhCcCEeC
Confidence 44446788999987
No 39
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase. Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=8.8e-67 Score=513.99 Aligned_cols=301 Identities=24% Similarity=0.242 Sum_probs=265.5
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
+.| ||++++++|.++|+++. .++.+.+.++..+++....++..+.+++|++.| .|||+|+|||
T Consensus 37 ~~Gii~~~~a~~I~~a~~~~~---------~d~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~g-------~~vH~G~S~n 100 (338)
T TIGR02426 37 DAGLIPAEAAAAIEAACAAAA---------PDLEALAHAAATAGNPVIPLVKALRKAVAGEAA-------RYVHRGATSQ 100 (338)
T ss_pred HcCCCCHHHHHHHHHhhccCC---------CCHHHHHhHHHhcCCcHHHHHHHHHHHhCcccc-------CcccCCCChh
Confidence 689 99999999999998753 222322223333444443477888899986555 4566789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .+.+.+.+++++|.++|++|+|++||||||+|||||||||||+++|+++|.||++||.+++++
T Consensus 101 D~~~Ta~~L~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~l~~~~~~l~r~~~rL~~~~~~ 179 (338)
T TIGR02426 101 DVIDTSLMLQLRDALD-LLLADLGRLADALADLAARHRDTPMTGRTLLQQAVPTTFGLKAAGWLAAVLRARDRLAALRTR 179 (338)
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCceecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+|||| |+||+.+. +.++..++++++++|||+.+. .+ |+++||+++++++++++++++|+|||+||++|+
T Consensus 180 ~~~~~lGg-avGtg~~~-~~~~~~v~~~~a~~LGl~~~~-~~---~~~~rd~~~e~~~~l~~la~~l~ria~Dl~l~s-- 251 (338)
T TIGR02426 180 ALPLQFGG-AAGTLAAL-GTRGGAVAAALAARLGLPLPA-LP---WHTQRDRIAEFGSALALVAGALGKIAGDIALLS-- 251 (338)
T ss_pred hHhcCCcc-hhccCCCc-cchHHHHHHHHHHHhCcCCCC-Cc---chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 99999999 88998654 467788899999999999853 32 689999999999999999999999999999999
Q ss_pred CCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHHH
Q 015619 241 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASA 320 (403)
Q Consensus 241 ~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 320 (403)
++||||+.++ .++|||||||||||+.+|.++++++++.|+..++ +..+..++|++...|..+|.++|+++.+.++++
T Consensus 252 -~~e~gei~~~-~~~GSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~-~~~~~~~~Er~~~~~~~e~~~lp~~~~~~~~~l 328 (338)
T TIGR02426 252 -QTEVGEVFEA-GGGGSSAMPHKRNPVGAALLAAAARRVPGLAATL-HAALPQEHERSLGGWHAEWETLPELVRLTGGAL 328 (338)
T ss_pred -cCCCChhhhC-CCCCcccCCCCCCcHHHHHHHHHHHHHHHHHHHH-HHhchHhhccCCCchHHHHHHHHHHHHHHHHHH
Confidence 4699999884 4799999999999999999999999999998877 566889999999999999999999999999999
Q ss_pred HHHHhhhhcC
Q 015619 321 SFEKNCVRGI 330 (403)
Q Consensus 321 ~~~~~~l~~l 330 (403)
..+..++++|
T Consensus 329 ~~~~~~l~~l 338 (338)
T TIGR02426 329 RQAQVLAEGL 338 (338)
T ss_pred HHHHHHHhcC
Confidence 9988888875
No 40
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=2.2e-64 Score=498.26 Aligned_cols=300 Identities=19% Similarity=0.224 Sum_probs=261.5
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccc-cchhHHHHHHHHHHhCCcCCCcccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSN-MNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~ 79 (403)
++| ||++++++|.++|+++.. |+.+.+.++..+ +++++++ ..+.+.+|++. ++|||+|+||
T Consensus 46 ~~G~Ip~~~a~~I~~a~~~~~~---------d~~~~~~~~~~~g~~v~~~v-~~l~~~~g~~~-------~~~vH~G~Ts 108 (351)
T PRK05975 46 EHGIIPAEAAERIAAACETFEP---------DLAALRHATARDGVVVPALV-RQLRAAVGEEA-------AAHVHFGATS 108 (351)
T ss_pred HcCCCCHHHHHHHHHHhccCCC---------CHHHHhhHHHhcCCcHHHHH-HHHHHHhCchh-------hCcccCCCCh
Confidence 689 999999999999976531 111111112112 4555544 56777777433 4678899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||++||+++|++|+.+. .+.+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.++++
T Consensus 109 nDi~dTa~~L~lr~~l~-~l~~~L~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~ 187 (351)
T PRK05975 109 QDVIDTSLMLRLKAASE-ILAARLGALIARLDALEATFGQNALMGHTRMQAAIPITVADRLASWRAPLLRHRDRLEALRA 187 (351)
T ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+|||| |+||+.+ .+++++.+++++|++|||+.++ +|+++||+++++++++++++++|+|||+||++|+|
T Consensus 188 ~~~~~~lGG-AvGt~~~-~~~~~~~~~~~~a~~LGl~~~~-----~~~~~rD~~~e~~~~la~la~~l~kiA~Di~ll~s 260 (351)
T PRK05975 188 DVFPLQFGG-AAGTLEK-LGGKAAAVRARLAKRLGLEDAP-----QWHSQRDFIADFAHLLSLVTGSLGKFGQDIALMAQ 260 (351)
T ss_pred HhhhcCCcc-HhccCcc-CCCcHHHHHHHHHHHhCcCCCc-----chhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999 8999766 3555678999999999998542 37899999999999999999999999999999995
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+| |||.+|. ++|||||||||||+.+|.+++.++.+.++..++ ..++..++|++...|..+|..+|++..+.+++
T Consensus 261 ---~e-gev~~~~-~~GSS~MPhKrNPv~~E~i~~~ar~~~~~~~~~-~~~~~~~~er~~~~~~~e~~~lp~~~~~~~~~ 334 (351)
T PRK05975 261 ---AG-DEISLSG-GGGSSAMPHKQNPVAAETLVTLARFNATQVSGL-HQALVHEQERSGAAWTLEWMILPQMVAATGAA 334 (351)
T ss_pred ---CC-CcccCCC-CCccCCCCCCcCcHHHHHHHHHHHHHHHHHHHH-HhcccchhccCCchHHHHHHHHHHHHHHHHHH
Confidence 59 9999997 599999999999999999999999999987655 57788999999888999999999999999999
Q ss_pred HHHHHhhhhcCcc
Q 015619 320 ASFEKNCVRGIQA 332 (403)
Q Consensus 320 ~~~~~~~l~~l~v 332 (403)
+..+..++++|++
T Consensus 335 l~~~~~ll~~l~~ 347 (351)
T PRK05975 335 LRLALELAGNIRR 347 (351)
T ss_pred HHHHHHHHhhhHh
Confidence 9999999999865
No 41
>PRK09285 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=2.5e-64 Score=512.28 Aligned_cols=334 Identities=18% Similarity=0.169 Sum_probs=275.2
Q ss_pred HHHHHHHHhCCcCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCcceecccCC
Q 015619 50 IANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR-LIPNLKVLHNSLHSKSVEFKDIVKIGRTHT 128 (403)
Q Consensus 50 ie~~l~~~~g~~~g~~~~h~~~~vh~g~S~nD~~~Ta~~l~~~~~l~~~-l~~~l~~l~~~L~~~A~~~~~~~m~grTh~ 128 (403)
++..+.+.+|. .|+ -...+.|||+|+|||||+||+++|++|+.+. . +.+.|..++++|.++|++|++|+||||||+
T Consensus 96 ~~~~l~~~~~~-~~~-~~~~~~~vH~G~Ts~Di~dTa~~L~lr~~l~-~~l~~~L~~l~~~L~~lA~~~~~t~m~grTH~ 172 (456)
T PRK09285 96 VEYFLKEKLAG-LPE-LEAVSEFIHFACTSEDINNLSHALMLKEARE-EVLLPALRELIDALKELAHEYADVPMLSRTHG 172 (456)
T ss_pred HHHHHHHHhcc-cCc-chhHHhHccCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCeeeceecC
Confidence 77889999883 110 0022567888999999999999999999997 7 999999999999999999999999999999
Q ss_pred CCCccCchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCcccccCC-CCC--CCc-hhHHHHHHHHHHcCCCCCCCCchh
Q 015619 129 QDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG-LNT--KKG-FDVKIASAVAEETSLPFVTAENKF 204 (403)
Q Consensus 129 Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~Gt~-~~~--~~~-~~~~~~~~la~~LG~~~~~~~n~~ 204 (403)
|||||||||||+++|+++|.|+++||.++ ...+++|| |+||. .+. .++ .+.++.+.+++.|||..+ ++
T Consensus 173 Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~---~~~g~~~G-AvGt~~a~~~~~~~~~~~~v~~~~~~~LGL~~~----~~ 244 (456)
T PRK09285 173 QPATPTTLGKEMANVAYRLERQLKQLEAV---EILGKING-AVGNYNAHLAAYPEVDWHAFSREFVESLGLTWN----PY 244 (456)
T ss_pred CCCeeehHHHHHHHHHHHHHHHHHHHHHH---HHhhhccc-ccccHHHHhhhcCCccHHHHHHHHHHHhCCCCC----CC
Confidence 99999999999999999999999999998 35577776 88984 211 022 245788889999999864 34
Q ss_pred hH-hhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhh
Q 015619 205 EA-LAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNH 283 (403)
Q Consensus 205 da-~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~ 283 (403)
+| +.+||+++++++++++++++|+|||+||++|++ ..||+|. .+.+++|||||||||||+.+|.++++++.+.+..
T Consensus 245 ~~~v~~rD~~~e~~~~la~~a~~L~kia~Di~ll~~--~~e~~e~-~~~~~~GSS~MPhKrNPv~~E~i~~~a~~~~~~~ 321 (456)
T PRK09285 245 TTQIEPHDYIAELFDAVARFNTILIDLDRDVWGYIS--LGYFKQK-TKAGEIGSSTMPHKVNPIDFENSEGNLGLANALL 321 (456)
T ss_pred ccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhhhcc-CCCCCCCCCCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 45 599999999999999999999999999999996 2345553 2446899999999999999999999999999886
Q ss_pred HHHHhhcc-CccccccchhhHHHHhHHHHHHHHHHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHH-----hhCccccH
Q 015619 284 VAITVGGS-NGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVT-----SLNPKIGY 357 (403)
Q Consensus 284 ~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~-----~la~~lg~ 357 (403)
..+. ..+ ..++|++...|..+|.+ +.+......+...+..++++|+||++||++|+..++++.+ .|++ +|+
T Consensus 322 ~~~~-~~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~~l~~~~~~l~~L~V~~~rm~~nl~~~~~~~sE~~~~~l~~-~gr 398 (456)
T PRK09285 322 EHLA-AKLPISRWQRDLTDSTVLRNL-GVAFGYSLIAYDSLLKGLGKLEVNEARLAEDLDANWEVLAEPIQTVMRR-YGI 398 (456)
T ss_pred HHHH-hhccHHhhCCcCchhhhhcch-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcCcchHHHHHHHHHH-hCh
Confidence 5554 444 56788888777778888 7666666777777789999999999999999988888544 3555 899
Q ss_pred HHHHHHHH----HHHHcCCCHHHH---HHhcCCCCHHHHhhcCCcccccCCC
Q 015619 358 DNAAAVAK----KAHKEGTTLKDA---ALKLGVLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 358 ~~a~~~~~----~a~~~g~~l~e~---~~~~~~l~~~~l~~~ldp~~~vg~~ 402 (403)
.+||++++ .+.++|.+|+|+ +.+++.++ ++| .+|||.+|+|.+
T Consensus 399 ~~A~~~v~~~~~~~~~~~~~~~e~~~~l~~~~~~~-~~l-~~~~p~~ylg~a 448 (456)
T PRK09285 399 ENPYEKLKELTRGKRITAEALREFIDGLDLPEEAK-ARL-KALTPANYIGLA 448 (456)
T ss_pred HhHHHHHHHHHHHHHhccCCHHHHHHHhcCCHhHH-HHH-HcCCHHHHHhhH
Confidence 99987665 456789999998 76665554 679 999999999964
No 42
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL). This subgroup contains EcASL, the product of the purB gene in Escherichia coli, and related proteins. It is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=1e-62 Score=495.46 Aligned_cols=373 Identities=17% Similarity=0.145 Sum_probs=283.0
Q ss_pred CCC-CCH------HHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccC
Q 015619 2 EYG-LDP------AIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVN 74 (403)
Q Consensus 2 ~~G-i~~------~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh 74 (403)
+.| ||+ ++++.|.++++.... +.+.-.... ......+|.. ++..+.+++|. .|+. -..+.|||
T Consensus 27 ~~g~Ip~~~~~~~~aa~~i~~~~~~~~~------~d~~~~~~~-~~~~~hdv~a-l~~~l~~~~g~-~~~~-~~~~~~vH 96 (425)
T cd01598 27 NLEEIPEVPPLTKEELKFLRAIIENFSE------EDALRIKEI-EATTNHDVKA-VEYFLKEKFET-LGLL-KKIKEFIH 96 (425)
T ss_pred hcCCCCCCCCCCHHHHHHHHHHHhhcCc------cCHHHHHHH-HHHHCCCcHH-HHHHHHHHhcc-cccc-hhhhhHhc
Confidence 578 888 999999888753110 000000000 0001122222 77899999883 2200 02356888
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHH
Q 015619 75 RSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRV 154 (403)
Q Consensus 75 ~g~S~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL 154 (403)
+|+||||++||+++|++|+.+...+.+.|..++++|.++|++|++|+||||||+|||||||||||+++|+++|.|+++||
T Consensus 97 ~G~TsnDi~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~dt~m~GrTH~Q~A~P~TfG~~~a~w~~~L~r~~~RL 176 (425)
T cd01598 97 FACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVPMLSRTHGQPATPTTLGKELAVFVYRLERQYKQL 176 (425)
T ss_pred cCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCCccCeehhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999853678999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhcCCCcccccCCCCCC----Cch-hHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHH
Q 015619 155 ICCLPRMYQLAQGGTAVGTGLNTK----KGF-DVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMK 229 (403)
Q Consensus 155 ~~~~~~~~~~~lGg~a~Gt~~~~~----~~~-~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~k 229 (403)
.++. ..++||| ++||. +.. +++ +..+.+.+++.|||..++.+| .+++||+++++++++++++++|+|
T Consensus 177 ~~~~---~~g~~gG-avGt~-~~~~~~~~~~~~~~~~~~~a~~LgL~~~~~~~---~v~~rD~~~e~~~~La~la~~L~k 248 (425)
T cd01598 177 KQIE---ILGKFNG-AVGNF-NAHLVAYPDVDWRKFSEFFVTSLGLTWNPYTT---QIEPHDYIAELFDALARINTILID 248 (425)
T ss_pred HHHH---HhheeeC-chhhh-hhhhhccCcccHHHHHHHHHHHhCcCCCCccc---chhccHHHHHHHHHHHHHHHHHHH
Confidence 9983 4555776 89983 322 232 367889999999999765553 269999999999999999999999
Q ss_pred HHHHHHHhccCCCCcceeEEc--CCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhcc-CccccccchhhHHHH
Q 015619 230 IANDVRLLGSGPRCGLGELIL--PENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGS-NGHFELNVFKPMIAS 306 (403)
Q Consensus 230 ia~Dl~~~~s~~~~e~gev~~--~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~-~~~~e~~~~~~~~~~ 306 (403)
||+||++|++ + ||+.+ +++++|||||||||||+.+|+++++++.+.+....+ +..+ ..+++++...|..+|
T Consensus 249 ia~Di~ll~s---~--ge~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~a~~a~~~~~~~-~~~~~~~~~eRD~~~~~~e~ 322 (425)
T cd01598 249 LCRDIWGYIS---L--GYFKQKVKKGEVGSSTMPHKVNPIDFENAEGNLGLSNALLNHL-SAKLPISRLQRDLTDSTVLR 322 (425)
T ss_pred HHHHHHHHhC---C--cceeecCCCCCCCcCCCCCCcCchHHHHHHHHHHHHHHHHHHH-Hhhhhhhhhcccccchhhhc
Confidence 9999999996 3 34443 346899999999999999999999999888876555 4555 577888877777788
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHh-----hCccccHHHHHHHHHHHHH-cCCCHHHHHHh
Q 015619 307 GLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTS-----LNPKIGYDNAAAVAKKAHK-EGTTLKDAALK 380 (403)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~-----la~~lg~~~a~~~~~~a~~-~g~~l~e~~~~ 380 (403)
.+ +.+..+...+...+..++++|+||++||++|+..++++.++ |++ +|+++||++|.++.. ...+..+...-
T Consensus 323 ~~-~~~~~~~~~al~~~~~ll~~L~v~~~rm~~nl~~~~~i~sE~~~~~l~~-~gr~~Ah~~V~~~~~~~~~~~~~~~~~ 400 (425)
T cd01598 323 NI-GVAFGHSLIAYKSLLRGLDKLELNEARLLEDLDANWEVLAEPIQTVMRR-YGIPNPYEKLKDLTRGKRIDKETLKEF 400 (425)
T ss_pred cH-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcCHHHHHHHHHHHh-cChHhHHHHHHHHhCCCCCCHHHHHHH
Confidence 87 76666666666666899999999999999999988886543 455 899999999988764 33444443221
Q ss_pred c-C-CCCHHHHh--hcCCcccccC
Q 015619 381 L-G-VLNSEEFD--NLVVPEKMIG 400 (403)
Q Consensus 381 ~-~-~l~~~~l~--~~ldp~~~vg 400 (403)
. . ..+++.-+ -.|.|.+|+|
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~ 424 (425)
T cd01598 401 IDSLDIPEEAKAELLALTPANYIG 424 (425)
T ss_pred HHhCCCCHHHHHHHHhCCccccCC
Confidence 1 1 23332112 2578999998
No 43
>PLN02848 adenylosuccinate lyase
Probab=100.00 E-value=9.8e-61 Score=485.26 Aligned_cols=373 Identities=16% Similarity=0.151 Sum_probs=285.4
Q ss_pred CCC-C---CH---HHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCC--cCCCcccccccc
Q 015619 2 EYG-L---DP---AIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH--KRGEKIVHPNDH 72 (403)
Q Consensus 2 ~~G-i---~~---~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~--~~g~~~~h~~~~ 72 (403)
+.| | |+ ++++.|.+.+.++..+ . +.-... ....+..+|.. ++..+.+++|. +.| -.+.|
T Consensus 52 ~~g~i~~~P~i~~~aa~~i~~~~~~~~~~----d--~~~~~~-~e~~t~hdv~a-~~~~l~~~~~~~~~~~----~~~~~ 119 (458)
T PLN02848 52 QIPEVTEVPPFSDEANSFLEGIIAGFSVD----D--ALEVKK-IERVTNHDVKA-VEYFLKQKCKSHPELA----KVLEF 119 (458)
T ss_pred hcCCCCCCCCCCHHHHHHHHHHHHhcCHh----h--HHHHHH-HHHHhCCCcHH-HHHHHHHHhccccchh----hhhCc
Confidence 456 6 77 9999998887322100 0 000000 00112233443 57888888873 111 02568
Q ss_pred cCCCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHH
Q 015619 73 VNRSQSSNDTFPTVMHIAAAMETNSR-LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGI 151 (403)
Q Consensus 73 vh~g~S~nD~~~Ta~~l~~~~~l~~~-l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~ 151 (403)
||+|+|||||+||+++|++|+.+. . +.+.|..++++|.++|++|++++|+||||+|+|+|||||||+++|+++|.|++
T Consensus 120 vH~G~TsqDi~dTa~~L~lr~a~~-~~l~~~L~~l~~aL~~lA~~~~dt~m~GRTH~Q~A~PiTfG~~~a~w~~~L~r~~ 198 (458)
T PLN02848 120 FHFACTSEDINNLSHALMLKEGVN-SVVLPTMDEIIKAISSLAHEFAYVPMLSRTHGQPASPTTLGKEMANFAYRLSRQR 198 (458)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeehHHHHHHHHHHHHHHHH
Confidence 889999999999999999999997 7 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhcCCCcccccCCCCC---CCch-hHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHH
Q 015619 152 DRVICCLPRMYQLAQGGTAVGTGLNT---KKGF-DVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASL 227 (403)
Q Consensus 152 ~rL~~~~~~~~~~~lGg~a~Gt~~~~---~~~~-~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l 227 (403)
+||.++. ..+++|| |+||.... ++++ +.++.+.+++.|||...+.. +++++||+++++++++++++++|
T Consensus 199 ~rL~~~~---l~g~~~G-AvGt~aa~~~~~~~~d~~~v~~~la~~LGL~~~~~~---~~v~~rD~~~e~~~~La~~a~~l 271 (458)
T PLN02848 199 KQLSEVK---IKGKFAG-AVGNYNAHMSAYPEVDWPAVAEEFVTSLGLTFNPYV---TQIEPHDYMAELFNAVSRFNNIL 271 (458)
T ss_pred HHHHHHH---hccEeec-ccchhhhhhhccCCCCHHHHHHHHHHHhCCCCCCch---hhHhccHHHHHHHHHHHHHHHHH
Confidence 9998872 3467776 78874332 1434 37789999999999852222 24699999999999999999999
Q ss_pred HHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHH
Q 015619 228 MKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIA 305 (403)
Q Consensus 228 ~kia~Dl~~~~s~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~ 305 (403)
+|||+|++.|+ |+||+.++. +++|||||||||||+.+|.++++++.+.|....++......++|++...|..+
T Consensus 272 ~kia~Di~~~~-----e~ge~~e~~~~~~~GSS~MP~KrNPv~~E~i~~~a~~~~~~~~~~~~~~~~~~~eRD~~~s~~e 346 (458)
T PLN02848 272 IDFDRDIWSYI-----SLGYFKQITKAGEVGSSTMPHKVNPIDFENSEGNLGLANAELSHLSMKLPISRMQRDLTDSTVL 346 (458)
T ss_pred HHHHHHHHhhh-----hcCCcccccCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHhcCcchhhccccchhhhh
Confidence 99999988777 577776543 58999999999999999999999999999988886444777889988777778
Q ss_pred HhHHHHHHHHHHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHh-----hCccccHHHHHHHHHHHHH-cCCC---HHH
Q 015619 306 SGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTS-----LNPKIGYDNAAAVAKKAHK-EGTT---LKD 376 (403)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~-----la~~lg~~~a~~~~~~a~~-~g~~---l~e 376 (403)
|.+ +.+......+...+..++++|+||++||++|++.++++.++ |++ +|+.+||++++++.. +..+ +++
T Consensus 347 ~~~-~~~~~~~~~al~~~~~~l~~L~v~~~rm~~nl~~~~~~~sE~~~~~l~~-~G~~~A~e~v~~~~~~~~~~~~~~~~ 424 (458)
T PLN02848 347 RNM-GVGLGHSLLAYKSTLRGIGKLQVNEARLAEDLDQTWEVLAEPIQTVMRR-YGVPEPYEKLKELTRGRAVTKESMRE 424 (458)
T ss_pred ccH-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHccchhHHHHHHHHHHH-hChHHHHHHHHHHHHHccCCHHHHHH
Confidence 887 76666666666666789999999999999999988877543 555 899999999988654 3332 222
Q ss_pred HHHhcCCCCHHHHhh--cCCcccccCCC
Q 015619 377 AALKLGVLNSEEFDN--LVVPEKMIGPS 402 (403)
Q Consensus 377 ~~~~~~~l~~~~l~~--~ldp~~~vg~~ 402 (403)
.... -.++++..++ .|.|.+|+|.+
T Consensus 425 ~~~~-~~~~~~~~~~l~~~~~~~y~g~~ 451 (458)
T PLN02848 425 FIEG-LELPEEAKDQLLKLTPHTYIGAA 451 (458)
T ss_pred HHHH-cCCCHHHHHHHHhCCchhhhchH
Confidence 1111 1255444443 57899999864
No 44
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F ....
Probab=100.00 E-value=2.3e-61 Score=471.97 Aligned_cols=267 Identities=31% Similarity=0.432 Sum_probs=220.5
Q ss_pred CCC-CCHHHHHHHHHHHHHHHcc-ccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEG-KLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~ 79 (403)
+.| ||++++++|.++|+++..+ ...+.|++++.+++ ++.. ++..+.+.+|+..| ...+++.|||+|+||
T Consensus 41 ~~g~i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~----~~~~----~~~~l~~~~~e~~~-~~~~~~~~vH~G~Ts 111 (312)
T PF00206_consen 41 EAGIIPKEAADAIVKALEEILEDGDLDDAFELDEIEED----IGHA----VEANLNEVLGELLG-EPPEAGGWVHYGRTS 111 (312)
T ss_dssp HTTSSTHHHHHHHHHHHHHHHHHTCTHGHHHHCSCSSS----HHHH----HHHHHHHHHHHHHT-HSSGGGGGTTTT--H
T ss_pred HhhcchHHHHHHHHHHHHHHHHhhccccccchhhhhcc----chhH----HHHHHHHHhhhhhh-ccccccccccCCCcH
Confidence 579 9999999999999999973 22335667765443 3444 44444444442222 136778899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+...|.+.|..++++|.++|++|++|+||||||+|||||||||||+++|+++|.|+++||+++++
T Consensus 112 ~Di~~Ta~~l~lr~~~~~~l~~~l~~l~~~L~~~a~~~~~t~~~grTh~Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~ 191 (312)
T PF00206_consen 112 NDIVDTALRLQLRDALLELLLERLKALIDALAELAEEHKDTPMPGRTHGQPAQPTTFGHKLAAWADELARDLERLEEARK 191 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcCceeccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 99999999999999995369999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 160 RMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 160 ~~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
+++.+||||++. ||+++.++++...+.+.+++..||. .+..|..+|+++||+++++++++++++++|+|||+||++|+
T Consensus 192 ~~~~~~lgga~g~gt~~~~~~~~~~~~~~~L~~~~~l~-~~~~~~~~~~~~rd~~~e~~~~l~~l~~~l~kia~Dl~~~~ 270 (312)
T PF00206_consen 192 RLNVSPLGGAVGAGTSLGIDREFQERVAEELGEFTGLG-VPAPNWHDAVSSRDRLAELASALALLAGTLSKIAEDLRLLS 270 (312)
T ss_dssp HHHEEETTTTTTTSSHTTSHHHHHHHHHHHHHHHHCST-EECSSHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccCCCccccccccCcchhhhHHhhhhhhhhcc-cchhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999543 6656555544444444444444455 35788999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhh
Q 015619 239 SGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIG 281 (403)
Q Consensus 239 s~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g 281 (403)
| +|+||+++|. +++|||+|||||||+.+|.++++|++++|
T Consensus 271 s---~e~g~~~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~v~G 312 (312)
T PF00206_consen 271 S---TEIGEVEEPFPEGQVGSSIMPHKRNPVILENIRGLARQVIG 312 (312)
T ss_dssp S---TTTSSEEEEGGGSSSCSSSSTTCEETHHHHHHHHHHHHHHH
T ss_pred C---CceeeeecccccccCCCccCCCCCCCHHHHHHHHhhhcCcC
Confidence 6 4799999875 36699999999999999999999999987
No 45
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=4.2e-41 Score=326.28 Aligned_cols=322 Identities=20% Similarity=0.176 Sum_probs=277.5
Q ss_pred ccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHH
Q 015619 72 HVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGI 151 (403)
Q Consensus 72 ~vh~g~S~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~ 151 (403)
.+|+|+|+.++.|.+..+.+|+... .+...|...++.|...+.+|++++|.||||+|+|+|+|||++.+-|.++|.+++
T Consensus 102 iihlgatsc~vtdnadli~~rd~~k-~i~~~l~~vIdrls~~~~~~k~~~~~g~Th~q~A~l~tfgkr~~~~~qel~~~l 180 (481)
T KOG2700|consen 102 IIHLGATSCFVTDNADLIELRDASK-LILPYLAGVIDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRMCLWIQELLRDL 180 (481)
T ss_pred eEEeeeeeeeecCCccceechhHHH-HHHHHHHHHHHHHHHHHHHhccceecccccCccchhhHHHHHHHHHHHHHHHHH
Confidence 6778999999999999999999997 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhcCCCcccccCCCCCC----C--chhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHH
Q 015619 152 DRVICCLPRMYQLAQGGTAVGTGLNTK----K--GFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAA 225 (403)
Q Consensus 152 ~rL~~~~~~~~~~~lGg~a~Gt~~~~~----~--~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~ 225 (403)
++|..+.+++....++| |.||..+.. + +.-.++.+.+++.+||..+.+.+ ..+.+|+...+.++.|+++++
T Consensus 181 ~~f~~~~~~~~~~~~kg-a~gtqasf~~l~~~~~~kv~~ld~Lv~k~~gf~~~~~~T--GQt~sr~~~~~~~~~la~lga 257 (481)
T KOG2700|consen 181 ERFHRARTDVRFRGLKG-ATGTQASFLSLFLGDMDKVEKLDSLVTKELGFVPMYIVT--GQTYSRKTDAEEVAPLASLGA 257 (481)
T ss_pred HHHHHhhhhhhcccccc-chhhHHHHHHhhcccHHHHHHHHHHHHHHhCCCcccccc--CCcCCchhHHHHHHHHHHHHH
Confidence 99999999999999998 899954321 1 12345666888999999775554 357889999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhH
Q 015619 226 SLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPM 303 (403)
Q Consensus 226 ~l~kia~Dl~~~~s~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~ 303 (403)
+..|+|.|+++++. |+|+.+|- .+.|||.||+||||+.+|.+.++++.+..+....+...+..|+|+....+.
T Consensus 258 t~~k~~Tdirll~~-----~~ev~epFea~q~gsSaMp~krNpm~~E~itslar~l~~~v~~al~~~~~qw~Ertl~dSa 332 (481)
T KOG2700|consen 258 TAHKYATDIRLLAK-----FAEVEEPFEAHQIGSSAMPYKRNPMRCERITSLARHLRPYVTQALNTASVQWHERTLDDSA 332 (481)
T ss_pred HHHHHHHHHHHHHH-----HHHhhccccccccccccCCCCCCCchhHHHhHHHHHHHHHHHHHhhhHHHHHhhccccccc
Confidence 99999999999993 99999993 589999999999999999999999999999888876678889998877777
Q ss_pred HHHhHHHHHHHHHHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHH------HhhCcccc-HHHHHHHHH----HH----H
Q 015619 304 IASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPKIG-YDNAAAVAK----KA----H 368 (403)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~------~~la~~lg-~~~a~~~~~----~a----~ 368 (403)
+.|.++|..+...++.+....++++|+.|.+.+|++++.....++ ++|.+..+ |++||+.++ .+ .
T Consensus 333 ~~rivlP~~Fl~ad~~L~~~~ni~~gl~v~p~~i~r~i~~e~~~~~~eni~mAL~~~g~srq~ahe~I~~L~~~a~~~v~ 412 (481)
T KOG2700|consen 333 NRRIVLPDAFLTADGNLGTLLNILEGLVVYPKVIERNIRDELPFMVLENIIMALVKAGLSRQEAHEGIRKLSHQAAQVVK 412 (481)
T ss_pred ccceechHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHhhhhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 778899999999999998667899999999999999987665542 46776654 899986443 33 5
Q ss_pred HcCCCHHHHHH--hc--CCCCHHHHhhcCCcccccCCC
Q 015619 369 KEGTTLKDAAL--KL--GVLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 369 ~~g~~l~e~~~--~~--~~l~~~~l~~~ldp~~~vg~~ 402 (403)
++|.++..... ++ .....||+..+|||.+|+|.+
T Consensus 413 ~e~g~~~~ie~~k~~~~~~~v~ee~~~ll~p~~f~gra 450 (481)
T KOG2700|consen 413 QEGGDNDLIERAKEDPTFKPVKEELDSLLDPLNFTGRA 450 (481)
T ss_pred HhcCCcHHHHHhcccccccchHHHHHhhccchhccccc
Confidence 67887665433 23 457788999999999999975
No 46
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respective
Probab=100.00 E-value=2.4e-36 Score=283.11 Aligned_cols=184 Identities=39% Similarity=0.494 Sum_probs=166.3
Q ss_pred HHHHHHHHhCCcCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCC
Q 015619 50 IANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQ 129 (403)
Q Consensus 50 ie~~l~~~~g~~~g~~~~h~~~~vh~g~S~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q 129 (403)
||..+++.+|.+.++ .|...++|+|+||||+.+|+.++++++.+. .+...+..+..++..++++|++++||||||+|
T Consensus 16 i~~~L~~~~~~~~~~--~~~~~~~h~g~s~~d~~~t~~~~~~~~~l~-~l~~~l~~~~~~l~~~a~~~~~~~~~~~th~q 92 (231)
T cd01594 16 VEEVLAGRAGELAGG--LHGSALVHKGRSSNDIGTTALRLALRDALD-DLLPLLKALIDALALKAEAHKGTVMPGRTHLQ 92 (231)
T ss_pred HHHHHHHHHHHHhcc--ccCCCCCCCCCCCchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCEeecccccc
Confidence 566777777766553 344458899999999999999999999997 99999999999999999999999999999999
Q ss_pred CCccCchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhh
Q 015619 130 DATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAA 209 (403)
Q Consensus 130 ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~ 209 (403)
+|+|+|||||+++|.+.|.|+++||.++
T Consensus 93 ~A~p~t~g~~~~~~~~~l~~~~~rL~~~---------------------------------------------------- 120 (231)
T cd01594 93 DAQPVTLGYELRAWAQVLGRDLERLEEA---------------------------------------------------- 120 (231)
T ss_pred cCccccHHHHHHHHHHHHHHHHHHHHHH----------------------------------------------------
Confidence 9999999999999999999999999998
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC--CCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHH
Q 015619 210 HDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN--EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAIT 287 (403)
Q Consensus 210 rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~~~~e~gev~~~~~--~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~ 287 (403)
+++++++.++.++.+|+|||+|+++|++. |++++.+|.. ++|||+||||+||+.+|.+++.+..+.|....+.
T Consensus 121 --~~~~~~~~l~~~~~~l~r~a~d~~~~~~~---~~~~~~~~~~~~~~gSS~mp~k~Np~~~e~~~~~~~~~~~~~~~~~ 195 (231)
T cd01594 121 --AVAEALDALALAAAHLSKIAEDLRLLLSG---EFGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVL 195 (231)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCeeeCccCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhhHHHHH
Confidence 89999999999999999999999999975 6888888763 8899999999999999999999999999988876
Q ss_pred hhccCc
Q 015619 288 VGGSNG 293 (403)
Q Consensus 288 ~~~~~~ 293 (403)
....+.
T Consensus 196 ~~~~~~ 201 (231)
T cd01594 196 TALKGG 201 (231)
T ss_pred HHHhcc
Confidence 554443
No 47
>PRK08937 adenylosuccinate lyase; Provisional
Probab=99.97 E-value=6.4e-31 Score=244.34 Aligned_cols=178 Identities=25% Similarity=0.242 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCcccc
Q 015619 219 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFE 296 (403)
Q Consensus 219 ~l~~~~~~l~kia~Dl~~~~s~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e 296 (403)
+++.++++|+|||+||++|+| +|||||.+|. +++|||||||||||+.+|.+++.++++.|+..+++... .+++|
T Consensus 22 ~l~~i~~~l~ria~Dl~~~~s---~e~gei~~~~~~~~~gSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~~e 97 (216)
T PRK08937 22 VLALIATSLEKFANEIRLLQR---SEIREVEEPFAKGQKGSSAMPHKRNPIGSERITGLARVLRSYLVTALENV-PLWHE 97 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---cccceeecccccCCCCCccCCCccCcHHHHHHHHHHHHHHHHHHHHHHHh-HHHhc
Confidence 999999999999999999995 5999999994 58999999999999999999999999999998886544 78889
Q ss_pred ccchhhHHHHhHHHHHHHHHHHHHHHHHhhhhcCccCHHHHHHHhhhhhh--HHHhh----Cc-cccHHHHHHHH----H
Q 015619 297 LNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLM--LVTSL----NP-KIGYDNAAAVA----K 365 (403)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~--~~~~l----a~-~lg~~~a~~~~----~ 365 (403)
++...|..+|..++.+......++.....++++++||++||++++..++. +++.+ ++ .+||++||+.+ +
T Consensus 98 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~a~~l~~~L~~~g~~~~~Ah~~v~~~~~ 177 (216)
T PRK08937 98 RDLSHSSAERIALPDAFLALDYILNRFVNILENLVVFPENIERNLDKTLGFIATERVLLELVEKGMGREEAHELIREKAM 177 (216)
T ss_pred cCCchhHHHhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcChHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 88777777776555554555555555568999999999999999987444 34333 33 47888888655 4
Q ss_pred HHHHcCCCHHHHHHhcC----CCCHHHHhhcCCcccccC
Q 015619 366 KAHKEGTTLKDAALKLG----VLNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 366 ~a~~~g~~l~e~~~~~~----~l~~~~l~~~ldp~~~vg 400 (403)
.+.++|.++.+.+..+. .+++++++.++||++|+|
T Consensus 178 ~~~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~vg 216 (216)
T PRK08937 178 EAWKNQKDLRELLEADERFTKQLTKEELDELFDPEAFVG 216 (216)
T ss_pred HHHHhCCCHHHHHHhChHhHhcCCHHHHHHHhCHHhhcC
Confidence 56778999999888764 789999999999999997
No 48
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=98.79 E-value=4.2e-09 Score=75.90 Aligned_cols=55 Identities=47% Similarity=0.820 Sum_probs=48.3
Q ss_pred HHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccccCC
Q 015619 347 LVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 401 (403)
Q Consensus 347 ~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~vg~ 401 (403)
++|.|++++||+.|.+++++|.++|++++|++.+.+.+++++++++|||...+.|
T Consensus 1 laTaL~p~iGYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p~~mt~P 55 (55)
T PF10415_consen 1 LATALNPYIGYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDPERMTNP 55 (55)
T ss_dssp GGGGGHHHHHHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSHHHHTT-
T ss_pred CeeeccchhccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCHHHcCCc
Confidence 3678999999999999999999999999999999999999999999999998765
No 49
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) []. This entry represents the C-terminal, seven alpha-helical, domain of adenylosuccinate lyase [].; PDB: 1YIS_A 1C3U_B 1C3C_A 3C8T_A 2PFM_B 1RE5_D 1Q5N_A 2VD6_D 2J91_B 2X75_A.
Probab=97.99 E-value=4.6e-06 Score=65.28 Aligned_cols=54 Identities=28% Similarity=0.471 Sum_probs=43.2
Q ss_pred HhhCcc-ccHHHHHHHH----HHHHHcCCCHHHHHHhc----CCCCHHHHhhcCCcccccCCC
Q 015619 349 TSLNPK-IGYDNAAAVA----KKAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 349 ~~la~~-lg~~~a~~~~----~~a~~~g~~l~e~~~~~----~~l~~~~l~~~ldp~~~vg~~ 402 (403)
..|++. +|+++||+++ +++.++|.+|+|++.++ ..+++++|+++|||..|+|.+
T Consensus 11 ~~L~~~G~gR~~Ah~lv~~~a~~a~~~~~~l~e~l~~d~~i~~~ls~~el~~l~dp~~ylg~~ 73 (81)
T PF10397_consen 11 LALAEKGLGRQEAHELVQEAAMEAWENGRDLREVLLADPEIAAYLSEEELEELFDPESYLGNA 73 (81)
T ss_dssp HHHHHTTH-HHHHHHHHHHHHHHHHHTTS-HHHHHCTTHHHHTTSHHHHHHHHT-GGGGCTTH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHhHCCHHHHHhhcCHHHHHhhH
Confidence 467777 9999998655 56788999999999865 589999999999999999975
No 50
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B ....
Probab=97.05 E-value=0.00029 Score=53.47 Aligned_cols=55 Identities=22% Similarity=0.330 Sum_probs=37.7
Q ss_pred hhHHHhhCcc-----ccHHHHHH----HHHHHHHcCCCHHHHHHh-----cCCCCHHHHhhcCCcccccC
Q 015619 345 LMLVTSLNPK-----IGYDNAAA----VAKKAHKEGTTLKDAALK-----LGVLNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 345 ~~~~~~la~~-----lg~~~a~~----~~~~a~~~g~~l~e~~~~-----~~~l~~~~l~~~ldp~~~vg 400 (403)
++++|+||++ ++||+||+ +|+.+.++|+++.++..+ ...++ +++.++|||+++|.
T Consensus 1 f~~ATdlAD~LVr~GipFR~AH~iVg~~V~~a~~~~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~~~V~ 69 (70)
T PF14698_consen 1 FSTATDLADYLVRKGIPFREAHHIVGRLVRLAEEEGKPLSELTLEELQEISPEFE-EDVREALDPEASVE 69 (70)
T ss_dssp TGGHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTTS-GGGS-HHHHHHH-TT---GGGGGGSSHHHHHT
T ss_pred CccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhhCCHHHHHHHhHHhH-HHHHHHCCHHHHhc
Confidence 4577888774 69999985 556777899988775443 24565 89999999999875
No 51
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain IPR000362 from INTERPRO. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate []. ; GO: 0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, 0006188 IMP biosynthetic process; PDB: 2HVG_A 2QGA_C 2PTS_A 2PTR_A 2PTQ_B 3BHG_A 3GZH_A.
Probab=95.17 E-value=0.095 Score=43.23 Aligned_cols=103 Identities=14% Similarity=0.157 Sum_probs=53.7
Q ss_pred ccccchhhHHHHhHHHHHHHHHHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHh----hCccccHHHHHHHHHHHHHc
Q 015619 295 FELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTS----LNPKIGYDNAAAVAKKAHKE 370 (403)
Q Consensus 295 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~----la~~lg~~~a~~~~~~a~~~ 370 (403)
+||+...+.+.+++--.+....-+...+. +-+..|.||+++|.+.++.+|.+..+ +-...|+..++|..+....
T Consensus 3 ~QRDLtDSTvlRNiGva~~~sliA~~s~l-kGl~Kl~vn~~~l~~dL~~nWeVlaEpIQTvmRr~g~~~pYE~LK~lTR- 80 (115)
T PF08328_consen 3 WQRDLTDSTVLRNIGVAFGHSLIAYKSLL-KGLGKLEVNEERLAEDLDENWEVLAEPIQTVMRRYGIPNPYEKLKELTR- 80 (115)
T ss_dssp TTB-THHHHHHTTHHHHHHHHHHHHHHHH-HHHHTEEE-HHHHHHHHCT-GGGGHHHHHHHHHHTT-SSHHHHHHHHHT-
T ss_pred ccccchHHHHHHhhhHHHHHHHHHHHHHH-HHHhcccCCHHHHHHHHHHCHHHHHHHHHHHHHHcCCCCHHHHHHHHHc-
Confidence 45665545444444444433333444443 56788999999999999999986432 2234577778887776543
Q ss_pred CCCHH-HHHHh---cCCCCHHHHhh--cCCccccc
Q 015619 371 GTTLK-DAALK---LGVLNSEEFDN--LVVPEKMI 399 (403)
Q Consensus 371 g~~l~-e~~~~---~~~l~~~~l~~--~ldp~~~v 399 (403)
|.... +.+.+ .-.+++++-++ .+.|..|+
T Consensus 81 g~~it~~~l~~fI~~L~ip~~~k~~L~~ltP~~Y~ 115 (115)
T PF08328_consen 81 GKKITKEDLREFIESLDIPEEAKARLLALTPATYI 115 (115)
T ss_dssp TS---HHHHHHHHHTSSS-HHHHHHHHH--CCC--
T ss_pred CCCCCHHHHHHHHHhCCCCHHHHHHHHhcCccccC
Confidence 44433 22222 22466666544 47888875
No 52
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=92.07 E-value=3.5 Score=41.91 Aligned_cols=128 Identities=12% Similarity=0.011 Sum_probs=69.1
Q ss_pred HhccCcceecccCCCCCccCchhHHHHHHHHH------HHHHHHHHHhhhhhhhhcCCCcccccCCCCCCCchhHHHHHH
Q 015619 115 VEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQ------VKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASA 188 (403)
Q Consensus 115 ~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~------l~r~~~rL~~~~~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~ 188 (403)
++..=++|.-+| ||.+.|.+.+..++..+.- +.-|++-|.. +..+ .-||-.+-.|++.-..+
T Consensus 225 k~~gf~~~~~~T-GQt~sr~~~~~~~~~la~lgat~~k~~Tdirll~~-~~ev-~epFea~q~gsSaMp~k--------- 292 (481)
T KOG2700|consen 225 KELGFVPMYIVT-GQTYSRKTDAEEVAPLASLGATAHKYATDIRLLAK-FAEV-EEPFEAHQIGSSAMPYK--------- 292 (481)
T ss_pred HHhCCCcccccc-CCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHh-hccccccccccccCCCC---------
Confidence 667778999999 9999999999887766543 3334433333 2222 24554433344321111
Q ss_pred HHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCCCCCCCCchH
Q 015619 189 VAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQ 268 (403)
Q Consensus 189 la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~~~~e~gev~~~~~~~GSS~MPqK~NP~~ 268 (403)
.|++ .-.+ ++.++.++.-...+.-- .+.+.-.++..|+|.||+|.||+.
T Consensus 293 ------------rNpm----~~E~-------itslar~l~~~v~~al~--------~~~~qw~Ertl~dSa~~rivlP~~ 341 (481)
T KOG2700|consen 293 ------------RNPM----RCER-------ITSLARHLRPYVTQALN--------TASVQWHERTLDDSANRRIVLPDA 341 (481)
T ss_pred ------------CCCc----hhHH-------HhHHHHHHHHHHHHHhh--------hHHHHHhhcccccccccceechHH
Confidence 1211 0011 11112222222222221 111222245789999999999999
Q ss_pred HHHHHHHHHHHhhhhHH
Q 015619 269 CEALTMVCAQVIGNHVA 285 (403)
Q Consensus 269 ~E~i~~~a~~v~g~~~~ 285 (403)
++...+.........-+
T Consensus 342 Fl~ad~~L~~~~ni~~g 358 (481)
T KOG2700|consen 342 FLTADGNLGTLLNILEG 358 (481)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99998887655544333
No 53
>PF05924 SAMP: SAMP Motif; InterPro: IPR009224 This short region is found repeated in the mid region of the adenomatous polyposis proteins (APCs). This motif binds axin [].; GO: 0008013 beta-catenin binding, 0016055 Wnt receptor signaling pathway; PDB: 1EMU_B 2RQU_B.
Probab=30.45 E-value=16 Score=20.60 Aligned_cols=9 Identities=33% Similarity=0.505 Sum_probs=3.1
Q ss_pred CCCCCCCCC
Q 015619 257 SSIMPGKVN 265 (403)
Q Consensus 257 SS~MPqK~N 265 (403)
+|+||.|+-
T Consensus 11 ~sAmPk~~~ 19 (20)
T PF05924_consen 11 GSAMPKRRR 19 (20)
T ss_dssp HCTS-----
T ss_pred HHhcccccC
Confidence 678887763
No 54
>CHL00180 rbcR LysR transcriptional regulator; Provisional
Probab=27.66 E-value=2.5e+02 Score=26.70 Aligned_cols=57 Identities=16% Similarity=0.212 Sum_probs=42.8
Q ss_pred ccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCcccccCC
Q 015619 117 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG 174 (403)
Q Consensus 117 ~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg~a~Gt~ 174 (403)
.-++...=|| +..-.||..|..+..++..+.+.++++.+........+-|-=-+|+.
T Consensus 46 ~lg~~Lf~R~-~r~~~lT~~G~~l~~~a~~ll~~~~~~~~~~~~~~~~~~g~l~ig~~ 102 (305)
T CHL00180 46 QLNIPLFDRS-KNKASLTEAGELLLRYGNRILALCEETCRALEDLKNLQRGTLIIGAS 102 (305)
T ss_pred HhCCEEEEec-CCCceECHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCceEEEEEc
Confidence 4456677777 45689999999999999999999999988887776554443223653
No 55
>KOG4797 consensus Transcriptional regulator [Transcription]
Probab=20.91 E-value=3e+02 Score=22.65 Aligned_cols=37 Identities=19% Similarity=0.105 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEF 117 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~ 117 (403)
-|.+-|-+...+|+... .|.+++.+|.+....+-+++
T Consensus 54 MDLVKtHLmfAVREEVe-~Lk~qI~eL~er~~~Le~EN 90 (123)
T KOG4797|consen 54 MDLVKTHLMFAVREEVE-VLKEQIRELEERNSALEREN 90 (123)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 47777777777888875 78888888877777666554
Done!