Query 015619
Match_columns 403
No_of_seqs 174 out of 1458
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 15:45:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015619.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015619hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gtd_A Fumarase C, fumarate hy 100.0 5.2E-99 2E-103 766.1 40.2 399 2-400 82-482 (482)
2 3e04_A Fumarase, fumarate hydr 100.0 1.3E-98 5E-103 763.6 39.8 401 2-402 89-490 (490)
3 3r6q_A Aspartase; aspartate am 100.0 3.5E-97 1E-101 755.0 39.1 400 2-402 62-463 (468)
4 3ocf_A Fumarate lyase:delta cr 100.0 1.8E-96 6E-101 749.3 38.5 394 2-397 82-477 (478)
5 1fur_A Fumarase C, FUMC; hydro 100.0 8.8E-96 3E-100 746.4 42.1 400 2-402 61-463 (467)
6 1yfm_A Fumarase, YFUM; lyase, 100.0 1.2E-95 4E-100 746.5 39.3 400 2-401 87-487 (488)
7 4adm_A Fumarase C, fumarate hy 100.0 1.9E-95 6E-100 744.7 38.7 396 2-403 89-490 (495)
8 1jsw_A L-aspartase, L-aspartat 100.0 3.5E-95 1.2E-99 744.5 40.2 400 2-402 64-466 (478)
9 4hgv_A Fumarase C, fumarate hy 100.0 2.2E-94 7.4E-99 738.3 40.1 401 2-402 93-495 (495)
10 1vdk_A Fumarase C, fumarate hy 100.0 7E-95 2.4E-99 740.1 35.8 402 2-403 62-464 (466)
11 1q5n_A 3-carboxy-CIS,CIS-mucon 100.0 3.4E-79 1.2E-83 624.1 31.4 377 2-402 43-438 (454)
12 1re5_A 3-carboxy-CIS,CIS-mucon 100.0 1E-78 3.5E-83 620.0 29.5 377 2-402 41-434 (450)
13 3c8t_A Fumarate lyase; structu 100.0 1.6E-78 5.6E-83 618.3 31.0 371 2-402 43-432 (451)
14 1c3c_A Protein (adenylosuccina 100.0 4.6E-78 1.6E-82 611.7 30.9 366 2-402 35-420 (429)
15 2pfm_A Adenylosuccinate lyase; 100.0 7.5E-78 2.6E-82 611.9 32.0 367 2-402 45-432 (444)
16 2e9f_A Argininosuccinate lyase 100.0 1.1E-77 3.8E-82 613.0 29.2 367 2-400 48-435 (462)
17 1tj7_A Argininosuccinate lyase 100.0 2.3E-77 8E-82 609.9 30.9 368 2-399 46-431 (457)
18 1k7w_A Delta 2 crystallin; eye 100.0 1.7E-77 5.7E-82 612.7 27.9 366 2-400 53-437 (468)
19 1dof_A Adenylosuccinate lyase; 100.0 1.1E-73 3.7E-78 574.7 31.3 340 2-380 41-396 (403)
20 4eei_A Adenylosuccinate lyase; 100.0 1.8E-72 6.1E-77 570.3 26.7 361 2-402 36-422 (438)
21 2ptr_A Adenylosuccinate lyase; 100.0 6.9E-73 2.3E-77 578.1 20.2 371 7-402 61-448 (462)
22 1yis_A Adenylosuccinate lyase; 100.0 7.5E-71 2.6E-75 565.6 24.9 370 5-402 53-447 (478)
23 2j91_A Adenylosuccinate lyase; 100.0 3.8E-69 1.3E-73 554.5 29.8 370 5-402 79-475 (503)
24 2fel_A 3-carboxy-CIS,CIS-mucon 100.0 3E-68 1E-72 527.0 21.6 309 2-340 46-355 (359)
25 2qga_B Adenylosuccinate lyase; 100.0 4.2E-67 1.4E-71 535.8 17.5 378 4-402 51-450 (465)
26 3bhg_A Adenylosuccinate lyase; 100.0 2E-65 6.9E-70 522.6 27.0 371 6-402 63-451 (459)
27 3ll8_A Serine/threonine-protei 28.8 1.9E+02 0.0064 27.7 8.5 80 2-85 39-119 (357)
28 2dl1_A Spartin; SPG20, MIT, st 28.0 2.3E+02 0.0077 22.5 7.9 29 256-286 1-29 (116)
29 1fgl_B HIV-1 GAG protein; cycl 25.8 22 0.00076 20.6 0.8 14 125-138 2-15 (26)
30 3h63_A Serine/threonine-protei 24.0 2.7E+02 0.0091 26.0 8.5 83 2-87 25-112 (315)
31 3icf_A PPT, serine/threonine-p 20.0 3.3E+02 0.011 25.6 8.3 82 2-86 27-115 (335)
No 1
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=100.00 E-value=5.2e-99 Score=766.10 Aligned_cols=399 Identities=65% Similarity=0.991 Sum_probs=384.3
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S~ 79 (403)
+.| ||++.+++|.++|++|.++...++||++++|+|+||++|||+|||||++++|++|.++|+|. +||++|||+||||
T Consensus 82 ~~G~l~~~~a~aI~~a~~ev~~g~~~~~fp~~~~q~gsGt~~Nmn~NevIa~ra~e~~G~~~g~~~~vHpndhVn~gqSs 161 (482)
T 3gtd_A 82 EFGDLEYKIATSIDKAIDRILAGEFEDNFPLVVWQTGSGTQTNMNMNEVIASIANEELTGKKGGKFPVHPNDHVNKGQSS 161 (482)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHHTTTTTSCCCBSSSCTTCHHHHHHHHHHHHHHHHHHHHSCCCSSSSSCCCCCCTTTCCH
T ss_pred HcCCCCHHHHHHHHHHHHHHHcCCcccCCCeehhccCCCccccchHHHHHHHHHHHHhCcccCCcCcCCccccCCCCCCh
Confidence 689 99999999999999999988889999999999999999999999999999999998899764 8999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++++++.+.|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.++++
T Consensus 162 ND~~~Ta~~l~~~~~~~~~L~~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~P~TlG~~~~~~~~~l~rd~~RL~~~~~ 241 (482)
T 3gtd_A 162 NDSFPTAMHIATVLATKQQLIPALNNLLTYLQDKSKDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYALERIEDALK 241 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTGGGCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEeeccccCccCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999985479999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+||||||+||+++++++|+.++.++++++|||+.++.+|++|++++||++++++++++.++++|+|||+||++|+|
T Consensus 242 ~l~~~~lGgtAvGT~~~~~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsS 321 (482)
T 3gtd_A 242 KVYLLAQGGTAVGTGINSKIGFDIKFAQKVAEFTQQPFKTAPNKFESLAAHDALVEFSGTLNTIAVSLMKIANDIRLLGS 321 (482)
T ss_dssp TTTEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhCCCCccccCCCcCCchhHHHHHHHHHHHhCCCCccccchhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999988999999999999999999999999998678999999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+||+|||||.+|+.++|||||||||||+.+|.++++|++|+|+++++.+....++||+|.++|++.|+++++++++.+++
T Consensus 322 gpr~g~gEi~lp~~~~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~pl~~~~~l~s~~ll~~~~ 401 (482)
T 3gtd_A 322 GPRCGLGELHLPENEPGSSIMPGKVNPTQVEALTMVCTQVMGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSDSV 401 (482)
T ss_dssp CSSSSCCCEECCCCSCCCSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCBTTBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCeeEEECCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccchHHHHHHHHHHHHHHHHH
Confidence 99999999999988999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCccccc
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 399 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~v 399 (403)
..+..+|+++|+||++||+++++++++++|+|++++||+.|++++++|.++|++++|++.+.+.++++|++++|||..++
T Consensus 402 ~~~~~~~v~gl~vn~erm~~~l~~s~~lvTaLa~~iGy~~a~~ia~~A~~~g~~l~e~~~~~~~ls~eeld~~ldP~~~~ 481 (482)
T 3gtd_A 402 NSFVTHCVKGLEPNIARINTLRDKSLMLVTVLNPHIGYDNAAKIAKEAHKYGITLKEAAKKLNFLSEEEFDKIVVPEKMI 481 (482)
T ss_dssp HHHHHHTTTTCEECHHHHHHHHHHCGGGHHHHHHHHCHHHHHHHHHHHHHHTCCHHHHHHHTTSCCHHHHHHHHSCC---
T ss_pred HHHHHHHHccCEECHHHHHHHHhhhhHHHHHhhhHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHcCHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C
Q 015619 400 G 400 (403)
Q Consensus 400 g 400 (403)
|
T Consensus 482 g 482 (482)
T 3gtd_A 482 S 482 (482)
T ss_dssp -
T ss_pred C
Confidence 6
No 2
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.3e-98 Score=763.56 Aligned_cols=401 Identities=73% Similarity=1.126 Sum_probs=382.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCChh
Q 015619 2 EYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~Gi~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S~n 80 (403)
+.|||++.+++|.++|++|.+++..++||+|++|+|+||++|||+|||||++++|++|.++|+|. +||++|||+|||||
T Consensus 89 ~~Gl~~~~a~aI~~a~~ev~~g~~~~~Fp~~~~q~Gsgt~~nmn~NEvia~ra~e~~G~~~g~~~~vHpndhVn~gqSsN 168 (490)
T 3e04_A 89 DYGLDPKIANAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSN 168 (490)
T ss_dssp GGTCCHHHHHHHHHHHHHHHTTSCGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCCSSCCCCCCTTTCCHH
T ss_pred hcCCCHHHHHHHHHHHHHHHcCCcccCCceeeecCCCCCcccccHHHHHHHHHHHHhCcccCCCCCCCcccccCCCCChh
Confidence 34589999999999999999998889999999999999999999999999999999998899764 89999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++++++.+.|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++
T Consensus 169 D~~~Ta~~l~~~~~~~~~L~~~L~~L~~aL~~kA~e~~d~v~~GRTHlQ~A~PiTlG~~~~~~a~~l~rd~~RL~~~~~~ 248 (490)
T 3e04_A 169 DTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPR 248 (490)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCceeeccccCccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988854699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+||||||+||+++++++|+.++.+++++.|||+.++.+|++|++++||++++++++++.++++|+|||+||++|+|+
T Consensus 249 l~~~~lGgtAvGTg~~~~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~ve~~~~L~~la~~L~Kia~DlrllsSg 328 (490)
T 3e04_A 249 IYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSG 328 (490)
T ss_dssp TSEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHhCCCCccccCCCcCChhHHHHHHHHHHHHhCCCCcCCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999889999999999999999999999999976689999999999999999999999999999999999999999
Q ss_pred CCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHHH
Q 015619 241 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASA 320 (403)
Q Consensus 241 ~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 320 (403)
||+|||||.+|+.++|||||||||||+.+|.++++|++|+|+++++.+.+.+++||+|.++|++.++++++++++.+++.
T Consensus 329 pr~g~gEi~lp~~~~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~ai~~a~~~g~~eln~~~p~~~~~ll~s~~ll~~~~~ 408 (490)
T 3e04_A 329 PRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASV 408 (490)
T ss_dssp SSSSCCCEECCCCSCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEECCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999889999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred HHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccccC
Q 015619 321 SFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 321 ~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~vg 400 (403)
.+...|+++|+||++||+++++++++++|+|++++||+.|++++++|.++|++++|++.+.+.+++++++++|||..++|
T Consensus 409 ~~~~~~v~gl~vn~erm~~~l~~s~~lvTaLa~~iGy~~a~~iak~A~~~g~~l~e~~~~~~~ls~eeld~~ldP~~~~g 488 (490)
T 3e04_A 409 SFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLG 488 (490)
T ss_dssp HHHHHTGGGCEECHHHHHHHHHHCSGGGGGGHHHHCHHHHHHHHHHHHHHTCCHHHHHHHHTSCCHHHHHHHCCGGGSSC
T ss_pred HHHHHHHccCEECHHHHHHHHhhchHHHHHhhhHHHHHHHHHHHHHHHHHCCCHHHHHHHcCCCCHHHHHHHcCHHHhcC
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 015619 401 PS 402 (403)
Q Consensus 401 ~~ 402 (403)
+.
T Consensus 489 ~~ 490 (490)
T 3e04_A 489 PK 490 (490)
T ss_dssp C-
T ss_pred CC
Confidence 74
No 3
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=100.00 E-value=3.5e-97 Score=755.01 Aligned_cols=400 Identities=42% Similarity=0.713 Sum_probs=386.1
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCc-ccccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~-~~h~~~~vh~g~S~ 79 (403)
++| ||++++++|.++|++|.++...++|+++++++|+++++|||+||||++++.|++|++.|+| ++||++|||+||||
T Consensus 62 ~~Gil~~~~a~aI~~a~~~i~~~~~~~~f~~~~~~~g~gt~~nmnvnevia~~~~e~~G~~~g~y~~vHpndhVn~g~Ss 141 (468)
T 3r6q_A 62 EVGLLDKEVGQYIVKAADEVIEGKWNDQFIVDPIQGGAGTSINMNANEVIANRALELMGEEKGNYSKISPNSHVNMSQST 141 (468)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHTTTTGGGCCSCSSCSSTTHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCH
T ss_pred HcCCCCHHHHHHHHHHHHHHHhCccccCCCccHHhccccccccccHHHHHHHHHHHHhccccCCcCccCCccCCCCCCCh
Confidence 689 9999999999999999988888899999999999999999999999999999999877865 49999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.++++
T Consensus 142 nDv~~Ta~~L~~r~~l~-~l~~~L~~L~~~L~~~A~~~~~~v~~GrTHlQ~A~PiT~G~~~~~~~~~l~rd~~RL~~~~~ 220 (468)
T 3r6q_A 142 NDAFPTATHIAVLSLLN-QLIETTKYMQQEFMKKADEFAGVIKMGRTHLQDAVPILLGQEFEAYARVIARDIERIANTRN 220 (468)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCcEEecCcCCccceeccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+||||||+||++++++++...+.++++++|||+.++.+|++||+++||++++++++++.++++|+|||+||++|+|
T Consensus 221 ~l~~~~lGgtAvGT~~~~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~Kia~DlrllsS 300 (468)
T 3r6q_A 221 NLYDINMGATAVGTGLNADPEYISIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEVSSALKVCMINMSKIANDLRLMAS 300 (468)
T ss_dssp HHTEECTTCTTTSSCTTCCHHHHHHHHHHHHHHHCSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhhcCCCCeecCCCCCCChHHHHHHHHHHHHHhCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999989999999999999999999999999997668999999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+||+|||||.+|+.++|||||||||||+.+|.++++|++|+|+++++.+...++++|+|.+.|.+.+++++++.++.+++
T Consensus 301 ~pr~g~gei~lp~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~i~~~l~~s~~~l~~~l 380 (468)
T 3r6q_A 301 GPRAGLSEIVLPARQPGSSIMPGKVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFELNVMEPVLFFNLIQSISIMTNVF 380 (468)
T ss_dssp BSSSSCCCEECCCCSCCCTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeeEEECCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcCchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988999999999999999999999999999999999888888999999888888888999999999999
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCccccc
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 399 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~v 399 (403)
..+.+.|+++|+||++||++|+..+++++|+|++++||+.|++++++|.++|++|+|++.+.+.++++|++++|||..++
T Consensus 381 ~~~~~~~i~gl~vn~erm~~~l~~s~~l~t~La~~lgy~~a~~ia~~a~~~g~~l~e~~~~~~~ls~eel~~~ldp~~~~ 460 (468)
T 3r6q_A 381 KSFTENCLKGIKANEERMKEYVEKSIGIITAINPHVGYETAAKLAREAYLTGESIRELCIKYGVLTEEQLNEILNPYEMI 460 (468)
T ss_dssp HHHHHHTGGGCEECHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCCSHHHHHHHTSSCHHHHHHHSCHHHHT
T ss_pred HHHHHHHHccCEECHHHHHHHHHcCCchHHhcchhhHHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHcCHHHhc
Confidence 99977999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 015619 400 GPS 402 (403)
Q Consensus 400 g~~ 402 (403)
++.
T Consensus 461 ~~~ 463 (468)
T 3r6q_A 461 HPG 463 (468)
T ss_dssp SCC
T ss_pred CCC
Confidence 873
No 4
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=100.00 E-value=1.8e-96 Score=749.26 Aligned_cols=394 Identities=41% Similarity=0.652 Sum_probs=371.5
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S~ 79 (403)
++| ||++++++|.++|++|.++...++|+++++|+|++|++|||+||||++++++++|++.|+|+ +||++|||+||||
T Consensus 82 ~~G~l~~~~a~aI~~a~~ei~~g~~~~~f~~~~~q~g~gt~~nmnvnevia~~a~e~~G~~~G~~~~vHpndhVn~g~Ss 161 (478)
T 3ocf_A 82 KLRQLPEPKYAAIVAACDDIIDGLLMEQFVVDVFQGGAGTSSNMNANEVIANRALEHLGRPRGDYQTIHPNDDVNMSQST 161 (478)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHTTTTGGGCCCBTTCSSTTHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCH
T ss_pred hCCCCCHHHHHHHHHHHHHHHcCccccCCCcchhhccCCccccchHHHHHHHHHHHHhchhcCCCCccCCCCCCCCCCCh
Confidence 689 99999999999999999887888999999999999999999999999999999998888653 9999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.++++
T Consensus 162 NDv~~Ta~~L~~~~~l~-~L~~~L~~L~~~L~~kA~e~~d~v~~GRTHlQ~A~PiTlG~~~~~~a~~l~rd~~RL~~~~~ 240 (478)
T 3ocf_A 162 NDVYPTAVRLALLLSQN-QVQTALHRLIAAFEAKGREFATVIKIGRTQLQDAVPITLGQEFEAFAATLREDTARLEEVAA 240 (478)
T ss_dssp HHHHHHHHHHHHHHTHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCcEeecccccccceeecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999996 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
+++.+||||||+||+++++++|+..+.++++++|||+..+.+|++||+++||++++++++|+.++++|+|||+||++|+|
T Consensus 241 ~l~~~~lGgtAvGTg~~~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsS 320 (478)
T 3ocf_A 241 LFREVNLGGTAIGTRINASHAYAEQAIVELSQISGIELKATGNLVEASWDTGAFVTFSGILRRIAVKLSKIANDLRLLSS 320 (478)
T ss_dssp GGGEECTTC-----------CHHHHHHHHHHHHHTSCCEECSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhHhCCCCeeeCCCcCCChhHHHHHHHHHHHhcCCCCccCCChhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999997678999999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+||+|||||.+|+.++|||||||||||+.+|.++++|++|+|+++++.+...+++||+|.++|.+.++++++++++.+++
T Consensus 321 gpr~g~gEi~lp~~q~GSSiMP~K~NPv~~E~i~~~a~~V~G~~~~i~~a~~~g~leln~~~p~i~~~l~~s~~ll~~~~ 400 (478)
T 3ocf_A 321 GPRSGLGEIRLPAVQPGSSIMPGKVNPVIPESVNQVCYQVIGNDLTVTMAAESGQLQLNAFEPLIVYNILSSMRLLGRAM 400 (478)
T ss_dssp BSSSSCCCEECCCCSCCBTTBTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeEEECCCCCCcCCCCCcccCcHHHHHHHHHHHHHHhHHHHHHHHHhcCcchhcccchhHHHHHHHHHHHHHHHH
Confidence 99999999999988999999999999999999999999999999999888889999999999988899999999999999
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCccc
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEK 397 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~ 397 (403)
..+...|+++|+||++||++++..+++++|+|++++||+.|++++++|.++|++|+|++.+.+. ++++++++|||.+
T Consensus 401 ~~~~~~~v~gl~vn~erm~~~l~~s~~lvtaLa~~igy~~a~~ia~~A~~~g~~l~e~~~~~~~-s~eel~~~ldp~~ 477 (478)
T 3ocf_A 401 TNLAERCVDGIEANVERCRAGAEESISLATALVPVVGYARAAEIAKQALASGQTVMEVAISKGL-DASALTIMLDPLR 477 (478)
T ss_dssp HHHHHHTGGGCEECHHHHHHHHHTCGGGGGGGHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTC-CCHHHHHHTCSCC
T ss_pred HHHHHHhhCCCEECHHHHHHHHHhCccHHHHhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHcCC-CHHHHHHhcCccc
Confidence 9998889999999999999999999999999999999999999999999999999999999887 9999999999986
No 5
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=100.00 E-value=8.8e-96 Score=746.42 Aligned_cols=400 Identities=62% Similarity=0.957 Sum_probs=383.2
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S~ 79 (403)
++| ||++++++|.++|++|.++...++|+++++|+|++||+|||+|+||++++++++|++.|+|. +||++|||+||||
T Consensus 61 ~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~~~~~q~g~~~~~~mn~~~via~~a~e~~G~~~g~~~~lHp~~~Vn~g~Ss 140 (467)
T 1fur_A 61 DLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSS 140 (467)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHTTTTGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCSSTTCSSCCCCCCTTTCCH
T ss_pred HCCCCCHHHHHHHHHHHHHHHhccccccccchhhhccccccccccHHHHHHHHHHHHhCcccccccccCchhhcccCCCh
Confidence 689 99999999999999999887788899999999999999999999999999999998888533 9999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 80 NDTFPTVMHIAAAMETNSR-LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~-l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
||+++|+++|++|+++. . |.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++
T Consensus 141 nD~~~Ta~~L~lr~~l~-~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 219 (467)
T 1fur_A 141 NDVFPTAMHVAALLALR-KQLIPQLKTLTQTLNEKSRAFADIVKIGRTNLQDATPLTLGQEISGWVAMLEHNLKHIEYSL 219 (467)
T ss_dssp HHHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCcEeeccccCccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 7 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++++.+||||||+||++++++.++.++.+++|+.|||+.++.+|++||+++||++++++++++.++++|+|||+||++|+
T Consensus 220 ~~l~~~~lGgtAvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~ 299 (467)
T 1fur_A 220 PHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLA 299 (467)
T ss_dssp HHHTEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhcCcCcchhcCCccCChhHHHHHHHHHHHHhCCCCccCCCHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998999999999999999999999999999767899999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 239 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 239 s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
|+||+|||||++|++++|||||||||||+.+|.++++|++++|++++++.....+++|++...|...+.+++++..+.++
T Consensus 300 S~~r~~~gei~lp~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~~~~~~~~~l~~s~~~l~~~ 379 (467)
T 1fur_A 300 SGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADG 379 (467)
T ss_dssp CCSSSSCCSEECCCCSCCCTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCceeEECCCCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHHHHH
Confidence 99999999999999899999999999999999999999999999999988788899999999999889999999999999
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccc
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 398 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~ 398 (403)
+..+..+|+++|+||++||++++..+++++|+|++++||+.|++++++|.++|++++|++.+.+.++++++++++||..+
T Consensus 380 l~~~~~~~l~gl~vn~erm~~~l~~~~~l~t~La~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~e~~~~ldp~~~ 459 (467)
T 1fur_A 380 MESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQM 459 (467)
T ss_dssp HHHHHHHTGGGCEECHHHHHHHHHHCSTTHHHHHTTSCHHHHHHHHHHHHHHTCCHHHHHHHTTSSCHHHHHHHCCGGGC
T ss_pred HHHHHHHHHccCeeCHHHHHHHHHhCccHHHHhHhhccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHHHhcCHHHH
Confidence 99997789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC
Q 015619 399 IGPS 402 (403)
Q Consensus 399 vg~~ 402 (403)
+|+.
T Consensus 460 ~~~~ 463 (467)
T 1fur_A 460 VGSM 463 (467)
T ss_dssp ----
T ss_pred hCcc
Confidence 9874
No 6
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=100.00 E-value=1.2e-95 Score=746.49 Aligned_cols=400 Identities=70% Similarity=1.036 Sum_probs=377.8
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++|++|.++...++|+++++|+|++|++|||+|+||+++++|++|.+.|.+++||++|||+|||||
T Consensus 87 ~~Gil~~~~a~aI~~a~~ei~~~~~~~~f~~~~~q~g~~t~~nmn~~evia~~a~e~lG~~~g~~~vHp~d~Vn~g~SsN 166 (488)
T 1yfm_A 87 SLGGLDPKISKAIQQAADEVASGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQVHPNNHCNQSQSSN 166 (488)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHHTSSGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHC---------CCCCCCCTTTCCHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHhcccccCCCcchhhccccccccccHHHHHHHHHHHHhCccccCCccCcccCcCCCCChh
Confidence 689 9999999999999999998888889999999999999999999999999999999777723599999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+.+.|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++
T Consensus 167 Dv~~Ta~~L~lr~~l~~~l~~~L~~L~~~L~~~A~e~~~~v~~GrTHlQ~A~PiT~G~~~~~~~~~l~rd~~RL~~~~~~ 246 (488)
T 1yfm_A 167 DTFPTVMHIAASLQIQNELIPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKT 246 (488)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcEeeceecCccceEeeHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999943799999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+||||||+||+++++++|+.++.+++|+.|||+.++.+|++|++++||++++++++++.++++|+|||+||++|+|+
T Consensus 247 l~~~~lGgtAvGT~~~~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsS~ 326 (488)
T 1yfm_A 247 LSFLAQGGTAVGTGLNTKPGFDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSG 326 (488)
T ss_dssp HTEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHSSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HhhcCCCCccccCCccCChhHHHHHHHHHHHHhCCCCccCccHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999976789999999999999999999999999999999999999999
Q ss_pred CCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHHH
Q 015619 241 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASA 320 (403)
Q Consensus 241 ~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 320 (403)
||+|||||++|++++|||||||||||+.+|.++++|++++|++++++....++++|+|.+.|.+.+++++++..+.+++.
T Consensus 327 pr~g~gei~lp~~~~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~~~~~l~~s~~~l~~~l~ 406 (488)
T 1yfm_A 327 PRCGYHELMLPENEPGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNVFKPVMIANLLNSIRLITDAAY 406 (488)
T ss_dssp SSSSCCCEECCCCSCCCTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCceeEECCCCCCcCCCcccccCcHHHHHHHHHHHHHHhHHHHHHHHHhcccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999989999999999999999999999999999999998888889999999999988999999999999999
Q ss_pred HHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccccC
Q 015619 321 SFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 321 ~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~vg 400 (403)
.+..+|+++|+||++||++++..+++++|+|++++||+.|++++++|.++|++++|++.+++.++++|+++++||..++|
T Consensus 407 ~~~~~~i~gl~vn~erm~~~l~~s~~l~t~La~~lg~~~a~~i~~~a~~~g~~l~e~~~~~~~l~~eel~~~ldp~~~~~ 486 (488)
T 1yfm_A 407 SFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKIGYDAASKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHMLG 486 (488)
T ss_dssp HHHHHTGGGCEECHHHHHHHHHHCSGGGTTTGGGTCHHHHHHHHHHHHHHTCCHHHHHHHTTSCCHHHHHHHCCGGGCC-
T ss_pred HHHHHHHccCEECHHHHHHHHccCchHHHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHhcCHHHhcC
Confidence 99878999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C
Q 015619 401 P 401 (403)
Q Consensus 401 ~ 401 (403)
+
T Consensus 487 ~ 487 (488)
T 1yfm_A 487 P 487 (488)
T ss_dssp -
T ss_pred C
Confidence 7
No 7
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=100.00 E-value=1.9e-95 Score=744.65 Aligned_cols=396 Identities=53% Similarity=0.810 Sum_probs=370.0
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++|++|.++...++|+++++|+|++|++|||+|+||.++. ++| |+ ++||++|||+|||||
T Consensus 89 ~~Gil~~~~a~aI~~a~~ei~~~~~~~~f~~~~~q~g~gt~~nmnvnevia~ra--~lG---G~-~vH~~dhVn~g~SsN 162 (495)
T 4adm_A 89 DLGLLAPEKADAIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIA--AKG---GV-TLHPNDDVNMSQSSN 162 (495)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHTTSCGGGCCCBSSSCTTCHHHHHHHHHHHHHHH--HHT---TC-CCCTTTTTTTTCCHH
T ss_pred HcCCCCHHHHHHHHHHHHHHHhCcccCCCCcchhhccccccccccHHHHHHHHH--HhC---CC-ccCcccccCCCCChh
Confidence 689 99999999999999999988888999999999999999999999998866 566 54 499999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+++.+.|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++
T Consensus 163 Dv~~Ta~~L~lr~~l~~~l~~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~PiT~G~~~~~~a~~l~rd~~RL~~~~~~ 242 (495)
T 4adm_A 163 DTFPTATHIAATEAAVAHLIPALQQLHDALAAKALDWHTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPR 242 (495)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999853699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCC-CCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSL-PFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~-~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++.+||||||+||+++++++++..+.++++++||| +..+.+|++||+++||++++++++++.++++|+|||+||++|+|
T Consensus 243 l~~~~LGgtAvGT~~~~~~~~~~~v~~~la~~lG~~~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsS 322 (495)
T 4adm_A 243 LGELAIGGTAVGTGLNAPDDFGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGS 322 (495)
T ss_dssp HTEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHCCTTCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhcCCCCCeeecCCccCChhHHHHHHHHHHHHhCCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999899999999999999999999999999 56678999999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+||+|||||.+|+.++|||||||||||+.+|.++++|++|+|+++++.+...+++||+|.++|.+.++++++++++.+++
T Consensus 323 gpr~e~gei~lp~~q~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~i~~~l~~s~~~l~~~l 402 (495)
T 4adm_A 323 GPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVS 402 (495)
T ss_dssp BSTTSCCCEECCCC---------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcceEECCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcChHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988999999999999999999999999999999999888888999999999988899999999999999
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCC----CCHHHHhhcCCc
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGV----LNSEEFDNLVVP 395 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~----l~~~~l~~~ldp 395 (403)
..+...|+++|+||++||++|+..+++++|+|++++||+.|+++|++|.++|++|+|++.+++. ++++|++++|||
T Consensus 403 ~~~~~~~l~gl~vn~erm~~~l~~s~~l~t~La~~igy~~a~~ia~~a~~~g~~l~e~~~~~~~~~~~ls~eel~~~ldp 482 (495)
T 4adm_A 403 RLFAQRCIAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLIGDRLSIEDLDRRLDV 482 (495)
T ss_dssp HHHHHHTGGGCEECHHHHHHHHHHCGGGGGGGHHHHCHHHHHHHHHHHHHHTCCHHHHHHHTTCCBTTBCHHHHHHHTCH
T ss_pred HHHHHHHHccCEECHHHHHHHHhccccHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHhCcccccCCCHHHHHHHcCH
Confidence 9997899999999999999999999999999999999999999999999999999999998765 999999999999
Q ss_pred ccccCCCC
Q 015619 396 EKMIGPSD 403 (403)
Q Consensus 396 ~~~vg~~~ 403 (403)
..++|+++
T Consensus 483 ~~~~~~~~ 490 (495)
T 4adm_A 483 LAMAKAEQ 490 (495)
T ss_dssp HHHTTCC-
T ss_pred HHhcCCcc
Confidence 99999863
No 8
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=3.5e-95 Score=744.50 Aligned_cols=400 Identities=40% Similarity=0.663 Sum_probs=379.2
Q ss_pred CCC-CCHHHHHHHHHHHHHHH-ccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCc-ccccccccCCCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQEVA-EGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQS 78 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~-~~h~~~~vh~g~S 78 (403)
+.| ||++++++|.++|++|. ++...+.|+++++++|++||+|||+|+||++++++++|++.|+| ++||++|||+|||
T Consensus 64 ~~Gii~~~~a~~I~~a~~~i~~~~~~~~~f~v~~~~~g~~~~~~mnv~~vIa~~~~e~~g~~~g~~~~lHpnd~Vn~g~S 143 (478)
T 1jsw_A 64 ELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQS 143 (478)
T ss_dssp HTTCSCHHHHHHHHHHHHHHSTTTCSTTCCCCCSSCCSTTHHHHHHHHHHHHHHHHHTTTSCCTTSCSSCCCCCCSCSCC
T ss_pred HCCCCCHHHHHHHHHHHHHHHhcchhccCCccchhhccCcccccccHHHHHHHHHHHHcCccccccccccccccccCCCC
Confidence 579 99999999999999999 88888899999999999999999999999999999999777853 5999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 79 SNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 79 ~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
||||++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++
T Consensus 144 snDv~~Ta~~L~lr~~l~-~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~RL~~~~ 222 (478)
T 1jsw_A 144 TNDAYPTGFRIAVYSSLI-KLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTA 222 (478)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHGGGCEEECCGGGSCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhCCeeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999995 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++++.+||||||+||+++++++++.++.+++++.|||+.++.+|++|++++||++++++++++.++++|+|||+||++|+
T Consensus 223 ~~~~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~ 302 (478)
T 1jsw_A 223 ELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLS 302 (478)
T ss_dssp HHTTEECCSCCSSSSCSSCTTTHHHHHHHHHHHHHCCCCEECSCSSSBTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCCCCccccCCccCCcchHHHHHHHHHHHcCCCCCcCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998999999999999999999999999999667899999999999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 239 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 239 s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
|+||+|||||.+|++++|||||||||||+.+|.++++|+++.|++.+++.....+++|++.+.|...+++++++..+.++
T Consensus 303 S~pr~e~gei~lp~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~p~~~~~l~~s~~~l~~~ 382 (478)
T 1jsw_A 303 SGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNA 382 (478)
T ss_dssp CSTTTSCCCEECCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCceeEECCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhHHHHHHHHHhccchhhcccchHHHHHHHHHHHHHHHH
Confidence 99999999999999899999999999999999999999999999999988888899999988888889999999999999
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccc
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 398 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~ 398 (403)
+..+..+|+++|+||++||+++++.+++++|+|++++||+.|+++++.|.++|++++|++.+++.+++++++++|||.+|
T Consensus 383 l~~~~~~~l~gl~vn~erm~~~l~~~~~l~t~La~~lg~~~a~~~v~~a~~~g~~l~e~~~~~~~l~~~~~~~~ldp~~~ 462 (478)
T 1jsw_A 383 CYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNL 462 (478)
T ss_dssp HHHHHHHTGGGCEECHHHHHHHHTTCTTCGGGTHHHHCHHHHHHHHHHHHTTCCCHHHHHHHHTSSCSHHHHTSCCC---
T ss_pred HHHHHHHHHccCeecHHHHHHHHHhCchHHHHHHHhhhHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHhCCHHHH
Confidence 99997679999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred cCCC
Q 015619 399 IGPS 402 (403)
Q Consensus 399 vg~~ 402 (403)
+|+.
T Consensus 463 ~~~~ 466 (478)
T 1jsw_A 463 MHPA 466 (478)
T ss_dssp ----
T ss_pred hCCC
Confidence 9874
No 9
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.2e-94 Score=738.33 Aligned_cols=401 Identities=65% Similarity=0.993 Sum_probs=384.2
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcc-cccccccCCCCCh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSS 79 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~-~h~~~~vh~g~S~ 79 (403)
++| ||++.+++|.+||++|.++...++||+|++|+|+|++.|||+||||++++.|.+|...|.|. +||++|||+|+||
T Consensus 93 ~lG~l~~~~a~aI~~A~~ei~~g~~~~~F~~d~~q~gsgt~~nmn~nevian~a~e~lg~~~g~~~~vhpnd~Vh~gqSs 172 (495)
T 4hgv_A 93 ALGRLDPAIGDAIVKAAQEVIDGKLDEHFPLVVWQTGSGTQSNMNANEVVSNRAIELLGGVMGSKKPVHPNDHVNMSQSS 172 (495)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHTTSSGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTTTCSCCCCCCCTTTCCH
T ss_pred HcCCCCHHHHHHHHHHHHHHHcCchhhccchhhhhhccccccCcchhHHHHHHHHHHcCcccCCCCCCCHHHhccCCCCh
Confidence 689 99999999999999999999999999999999999999999999999999999998888765 9999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 015619 80 NDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLP 159 (403)
Q Consensus 80 nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~ 159 (403)
||+++|+++|++++++.+.|.+.|..|+++|.++|++|++++||||||+|+|+||||||+|++|+++|.||++||+++++
T Consensus 173 nDv~~TA~~l~~~~~~~~~L~~~L~~L~~~L~~kA~~~~~~~~~GRTHlQ~A~P~TlG~~~~~~~~~l~r~~~RL~~~~~ 252 (495)
T 4hgv_A 173 NDTYPTAMHIACAERVIHDLLPALKHLHKALEEKVKAFDHIIKIGRTHTQDATPLTLGQEFSGYAAQVASSIKRIEMTLP 252 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccCCCCceeecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998875479999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 160 RMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 160 ~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++..+++||+|+||+.+.+++++..+.+++++.+||...+.+|+++|+++||++++++++++.++++|+|||+||++|+|
T Consensus 253 ~~~~~~lGgtAvGtg~~~~~~~~~~v~~~la~~~gl~f~~a~n~~~~~~~rD~~~e~~~~L~~la~~L~Kia~Dirll~S 332 (495)
T 4hgv_A 253 GLCELAQGGTAVGTGLNAPVGFAEKVAEEIAAITGIGFTSAPNKFEALAAHDSMVFSHGAINATAAALFKIANDIRFLGS 332 (495)
T ss_dssp HHTEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhhcCCcchhhhcccCchhHHHHHHHHHHHHhCCCccccCCHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999899999889999999999997778999999999999999999999999999999999999999
Q ss_pred CCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHH
Q 015619 240 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDAS 319 (403)
Q Consensus 240 ~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 319 (403)
+|+.||+|+.+|++++||||||||+||+.+|.++++|++++|+++++.+....+++|+|.+.|.+.|.++++++.+.+++
T Consensus 333 ~~~~g~~Ei~~p~~q~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~~~~e~n~~~~~~~~~ll~s~~~l~~~~ 412 (495)
T 4hgv_A 333 GPRSGLGELSLPENEPGSSIMPGKVNPTQCEALTQVCVQVFGNHAALTFAGSQGHFELNVYNPLMAYNFLQSVQLLADAA 412 (495)
T ss_dssp CSSSSCCCEECCCCSCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcceeeeEEecCcCCcccccCccccChHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCccccc
Q 015619 320 ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 399 (403)
Q Consensus 320 ~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~v 399 (403)
..+..+|+++|+||++||+++++.+++++|+|++++||+.|++++++|.++|++|+|++.+.+.++++|++++|||++|+
T Consensus 413 ~~~~~~~i~gl~vn~erm~~~l~~s~~lvtaL~~~iGy~~A~~iak~A~~~g~~lre~~~~~~~ls~eeld~lldP~~~~ 492 (495)
T 4hgv_A 413 ISFTDNCVVGIEAREDNIKAALDRSLMLVTALAPKIGYDNAAKIAKTAHKNGTTLREEAVGGGYVTDEEFDAVVRPETMI 492 (495)
T ss_dssp HHHHHHTGGGCEECHHHHHHHHHHCSGGGGGTHHHHCHHHHHHHHHHHHHHTCCHHHHHHTTTSSCHHHHHHHCCGGGSS
T ss_pred HHHHHHHhccCEECHHHHHHHHhcChhHHHHhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHhCCHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 015619 400 GPS 402 (403)
Q Consensus 400 g~~ 402 (403)
|++
T Consensus 493 gpA 495 (495)
T 4hgv_A 493 GPA 495 (495)
T ss_dssp SCC
T ss_pred CCC
Confidence 986
No 10
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=100.00 E-value=7e-95 Score=740.14 Aligned_cols=402 Identities=56% Similarity=0.847 Sum_probs=382.6
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++|++|.++...++|+++++|.+++||+|||+|+||+++++|++|.+.|.+++||++|||+|||||
T Consensus 62 ~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~~~~~q~~~~~~~~mn~~~via~~a~e~~g~~~g~~~lHp~~~Vn~g~Ssn 141 (466)
T 1vdk_A 62 ELGELPEEIAKAIIQAAEEVVQGKWDDHFPLVVFQTGSGTQTNMNVNEVIANRASEILGKPLGSKYAHPNDHVNRGQSSN 141 (466)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHTTTTGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCSSCCCCCCTTTCCHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHhcccccCCCchhhhccccccccccHHHHHHHHHHHHhCccccccccccccCcCCCCChh
Confidence 689 9999999999999999988778889999999999999999999999999999999777723599999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+.+.|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++
T Consensus 142 D~~~Ta~~L~lr~~l~~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~ 221 (466)
T 1vdk_A 142 DTFPTAMYVAVALALHQRLYPAVEGLIRTFTAKAQAFDQIVKVGRTHLMDAVPITLGQEIGSWAAQLKTTLAAVKEMEKG 221 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCccCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999943799999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+||||||+||+++++++++.++.+++|++|||+.++.+|++|++++||++++++++++.++++|+|||+||++|+|+
T Consensus 222 ~~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~ 301 (466)
T 1vdk_A 222 LYNLAIGGTAVGTGLNAHPRFGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGALMKIGNDVRWLASG 301 (466)
T ss_dssp GGEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHSSCCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCB
T ss_pred HhhcCCCccccCCCccCCchHHHHHHHHHHHHcCCCCCCCcchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999889999999999999999999999999976789999999999999999999999999999999999999999
Q ss_pred CCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHHH
Q 015619 241 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASA 320 (403)
Q Consensus 241 ~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 320 (403)
||+|||||++|++++|||||||||||+.+|.++++|++++|++.+++....++++|++.+.|.+.+++++++..+.+++.
T Consensus 302 ~r~~~gei~lp~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~~~~~~~~~l~~s~~~l~~~l~ 381 (466)
T 1vdk_A 302 PYAGIGEITIPANEPGSSIMPGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQGNFQLNVYKPVMAYSTLESINLLADAVA 381 (466)
T ss_dssp SSSSCCSEECCCCSCCSSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCBTTBCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeEECCCCCCcCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHccchhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999989999999999999999999999999999999998888889999999899888899999999999999
Q ss_pred HHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHhhcCCcccccC
Q 015619 321 SFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 321 ~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldp~~~vg 400 (403)
.+..+|+++|+||++||++++..+++++|+|++++||+.+++++++|.++|++++|++.+++.+++++++++|||..++|
T Consensus 382 ~~~~~~l~gl~vn~erm~~~l~~~~~l~t~La~~lg~~~a~~~v~~a~~~g~~l~e~~~~~~~l~~~~~~~~ldp~~~~~ 461 (466)
T 1vdk_A 382 SFDAHLAQGIEPNLERIEEYLQKNPMLATALNKAIGYDKAAEIVKKALKEKKTLKQAALELGYLTEEEFDRIVVPMRLAK 461 (466)
T ss_dssp HHHHHTGGGCEECHHHHHHHHTTCGGGGHHHHHHHCSHHHHTTTTTSCC--CCHHHHHHHTSSSCHHHHHHHCCHHHHHC
T ss_pred HHHHHHhccCEEcHHHHHHHHHhcchHHHHHHHhccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHHHHcCHHHhcC
Confidence 99778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 015619 401 PSD 403 (403)
Q Consensus 401 ~~~ 403 (403)
+.+
T Consensus 462 ~~~ 464 (466)
T 1vdk_A 462 PHE 464 (466)
T ss_dssp CC-
T ss_pred CCC
Confidence 753
No 11
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=100.00 E-value=3.4e-79 Score=624.11 Aligned_cols=377 Identities=21% Similarity=0.273 Sum_probs=318.1
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHH--HHHHHHhCCcCCCcccccccccCCCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIA--NRAAEILGHKRGEKIVHPNDHVNRSQS 78 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie--~~l~~~~g~~~g~~~~h~~~~vh~g~S 78 (403)
++| ||++++++|.++|++|.. +|+++..+.+.++ +.|+|++ ..+.+++|...| .+|+|||+|||
T Consensus 43 ~~Gii~~~~a~~I~~a~~~i~~-----~~~~~~~~~~~~~----~~~dVia~~~~l~e~~g~~~g----~~~~~vH~g~S 109 (454)
T 1q5n_A 43 QVGVIPQSAATVIQRAAKTAID-----KIDFDALATATGL----AGNIAIPFVKQLTAIVKDADE----DAARYVHWGAT 109 (454)
T ss_dssp HTTSSCHHHHHHHHHHHTTHHH-----HCCHHHHHHHHHH----HSSSHHHHHHHHHHHHHTTCT----TGGGGTTTTCC
T ss_pred HCCCCCHHHHHHHHHHHHHhhh-----cCCHHHHHHHhhc----cCCcHHHHHHHHHHHhccccC----CccccccCCCC
Confidence 579 999999999999987752 2444444433322 4444444 466798863222 23578889999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 79 SNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 79 ~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
|||+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++
T Consensus 110 snD~~~Ta~~L~~r~~l~-~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 188 (454)
T 1q5n_A 110 SQDILDTACILQCRDALA-IVQNQVQQCYETALSQAQTYRHQVMMGRTWLQQALPITLGHKLARWASAFKRDLDRINAIK 188 (454)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeeccccCCcCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++++.+|||| |+||+.+..+ +++.+++++++.|||+.++.+ |+.+||++++++++++.++++|+|||+||++|+
T Consensus 189 ~~~~~~~lGg-AvGT~~~~~~-~~~~~~~~~a~~LG~~~~~~~----~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~ 262 (454)
T 1q5n_A 189 ARVLVAQLGG-AVGSLASLQD-QGSIVVEAYAKQLKLGQTACT----WHGERDRIVEIASVLGIITGNVGKMARDWSLMM 262 (454)
T ss_dssp HHHSBCCCCC-TTSSCGGGTT-CHHHHHHHHHHHHTCBCCSSC----CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhcccCCch-HhhcCccccc-ccHHHHHHHHHHhCcCCCCCC----CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 8899988655 888999999999999987554 467999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHH
Q 015619 239 SGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 239 s~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
++||||+.+|. +++|||||||||||+.+|.++++|++++|++++++. +...++++|...|...|.+++++..+.
T Consensus 263 ---~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~ 338 (454)
T 1q5n_A 263 ---QTEIAEVFEPTAKGRGGSSTMPHKRNPVAAASVLAAANRVPALMSSIYQ-SMVQEHERSLGAWHAEWLSLPEIFQLT 338 (454)
T ss_dssp ---STTTCCEECCC-------------CCCHHHHHHHHHHHHHHHHHHHHHH-TTCCCTTSCSSHHHHHHHHHHHHHHHH
T ss_pred ---ccccchhccccccCCCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-hccchhcccccchHHHHHHHHHHHHHH
Confidence 67999999996 589999999999999999999999999999999864 466799999888888888887766666
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhhHH------HhhCccccHHHHHHHH----HHHHHcCCCHHHHHHhc----C
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPKIGYDNAAAVA----KKAHKEGTTLKDAALKL----G 382 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~------~~la~~lg~~~a~~~~----~~a~~~g~~l~e~~~~~----~ 382 (403)
+.++.+..+|+++|+||++||+++++.+.+++ +.|.+++||++||+++ +.+.++|.+|+|++.++ +
T Consensus 339 ~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~l~~~L~~~ig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~~ 418 (454)
T 1q5n_A 339 AGALERTLDVLKGMEVNAENMHQNIECTHGLIMAEAVMMALAPHMGRLNAHHVVEAACKTAVAEQKHLKDIISQVDEVKQ 418 (454)
T ss_dssp HHHHHHHHHHHHHCEECHHHHHHHHHTTTTGGGHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTCCHHHHHTTCHHHHT
T ss_pred HHHHHHHHHHHCcCEECHHHHHHHHHhCcChhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCHHHHHhcchhhhc
Confidence 66666778999999999999999998666654 5677779999999754 78889999999998887 7
Q ss_pred CCCHHHHhhcCCcccccCCC
Q 015619 383 VLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 383 ~l~~~~l~~~ldp~~~vg~~ 402 (403)
.++++++++++||.+|+|++
T Consensus 419 ~l~~~~l~~~ldp~~~~g~a 438 (454)
T 1q5n_A 419 YFNPSQLDEIFKPESYLGNI 438 (454)
T ss_dssp TCCHHHHHHHTCGGGGCTTH
T ss_pred CCCHHHHHHhCCHHHHcCcH
Confidence 89999999999999999975
No 12
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=100.00 E-value=1e-78 Score=619.99 Aligned_cols=377 Identities=23% Similarity=0.270 Sum_probs=321.2
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++|++ +.|+++..+.+.++. ..+|+ .++..+.+++|... -.+++|||+|+|||
T Consensus 41 ~~G~i~~~~a~~I~~a~~~-------~~f~~~~~~~~~~~~-~~dV~-a~~~~l~e~~g~~~----~~~~~~vh~g~Ssn 107 (450)
T 1re5_A 41 SAGLVPHSAVAAIEAACQA-------ERYDTGALANAIATA-GNSAI-PLVKALGKVIATGV----PEAERYVHLGATSQ 107 (450)
T ss_dssp TTTSSCHHHHHHHHHHCCG-------GGSCHHHHHHHHHHH-SSSHH-HHHHHHHHHHHHHC----GGGGGGTTTTCCHH
T ss_pred HCCCCCHHHHHHHHHHHhc-------CCCCHHHHHHHHhcc-CccHH-HHHHHHHHHhCCCC----CcccccccCCCChh
Confidence 789 999999999999864 235555444433321 22233 23445668887310 01478999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++
T Consensus 108 D~~~Ta~~l~lr~~l~-~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 186 (450)
T 1re5_A 108 DAMDTGLVLQLRDALD-LIEADLGKLADTLSQQALKHADTPLVGRTWLQHATPVTLGMKLAGVLGALTRHRQRLQELRPR 186 (450)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCeeeccccCccCccCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+|||| |+||+.+.+++ +.++.+++++.|||+.++.+ |+++||++++++++++.++++|+|||+||++|+
T Consensus 187 ~~~~~lGG-AvGt~~~~~~~-~~~~~~~la~~LG~~~~~~~----~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~-- 258 (450)
T 1re5_A 187 LLVLQFGG-ASGSLAALGSK-AMPVAEALAEQLKLTLPEQP----WHTQRDRLVEFASVLGLVAGSLGKFGRDISLLM-- 258 (450)
T ss_dssp HSBCCCCC-TTSSCGGGGGG-HHHHHHHHHHHHTCBCCSSC----CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred hhhcCCcc-hhcCCcccCcc-hHHHHHHHHHHhCcCCCCcc----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 99999997 89999998876 77899999999999986443 689999999999999999999999999999999
Q ss_pred CCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHH
Q 015619 241 PRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDA 318 (403)
Q Consensus 241 ~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 318 (403)
++|||||.+|. +++|||||||||||+.+|.++++|+++.|++.+++.. ...++|+|...|...|.+++++..+.++
T Consensus 259 -~~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~l~~~~~~~~~ 336 (450)
T 1re5_A 259 -QTEAGEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAATRVPGLLSTLFAA-MPQEHERSLGLWHAEWETLPDICCLVSG 336 (450)
T ss_dssp -STTTCCEECCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCCCTTBCSSTTTTHHHHHHHHHHHHHH
T ss_pred -ccCcceeecccccCCCccccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHh-ChhhccccccchHHHHHHHHHHHHHHHH
Confidence 67999999996 5899999999999999999999999999999998654 4569999999888889999999999999
Q ss_pred HHHHHHhhhhcCccCHHHHHHHhhhhhhHH------HhhCccccHHHHH----HHHHHHHHcCCCHHHHHHhc----CCC
Q 015619 319 SASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPKIGYDNAA----AVAKKAHKEGTTLKDAALKL----GVL 384 (403)
Q Consensus 319 ~~~~~~~~l~~l~v~~erm~~~l~~~~~~~------~~la~~lg~~~a~----~~~~~a~~~g~~l~e~~~~~----~~l 384 (403)
++.+..+|+++|+||++||+++++.+++++ +.|.+.+||++|| +++++|.++|.+|+|++.++ +.+
T Consensus 337 ~l~~~~~~l~~l~vn~erm~~~l~~s~~~~~Ae~l~~~L~~gig~~~A~~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~l 416 (450)
T 1re5_A 337 ALRQAQVIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVLAQRLGRDRAHHLLEQCCQRAVAEQRHLRAVLGDEPQVSAEL 416 (450)
T ss_dssp HHHHHHHHHHHCEECHHHHHHHHTTSTTGGGHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCHHHHHHTCHHHHHHS
T ss_pred HHHHHHHHhCcCEECHHHHHHHHHhCcChhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhccCC
Confidence 999999999999999999999998666654 5677789988888 56778889999999998887 679
Q ss_pred CHHHHhhcCCcccccCCC
Q 015619 385 NSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 385 ~~~~l~~~ldp~~~vg~~ 402 (403)
+++++++++||.+|+|++
T Consensus 417 ~~~~l~~~ldp~~~~~~a 434 (450)
T 1re5_A 417 SGEELDRLLDPAHYLGQA 434 (450)
T ss_dssp CHHHHHHHTCGGGCCTTH
T ss_pred CHHHHHHhcCHHHHhhhH
Confidence 999999999999999975
No 13
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=100.00 E-value=1.6e-78 Score=618.27 Aligned_cols=371 Identities=20% Similarity=0.235 Sum_probs=312.0
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHH--HHHHHHhCCcCCCcccccccccCCCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIA--NRAAEILGHKRGEKIVHPNDHVNRSQS 78 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie--~~l~~~~g~~~g~~~~h~~~~vh~g~S 78 (403)
++| ||++++++|.++|++ ++|+++..+.+.++ +.|+|++ ..+++++|+ .| .|||+|+|
T Consensus 43 ~~Gii~~~~a~~I~~a~~~-------~~~~~~~~~~~~~~----~~~dVia~~~~l~e~~g~-~g-------~~vH~g~S 103 (451)
T 3c8t_A 43 RLGIIPEDAAAGITAAART-------FAPEMERLRDDTEI----VGYPILPLVEQLSAHAGE-AG-------KYLHWGAT 103 (451)
T ss_dssp HTTSSCHHHHHHHHHHHHH-------CCCCHHHHHHHHHH----HSSSHHHHHHHHHHHHGG-GG-------GGSSSSCC
T ss_pred HCCCCCHHHHHHHHHHhhh-------cCCCHHHHHHHhhc----CCCcHHHHHHHHHHHccc-cc-------ccccCCCC
Confidence 679 999999999999975 23444444433332 3444444 456788883 44 45668899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 79 SNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 79 ~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
|||+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++
T Consensus 104 snDv~~Ta~~L~lr~~l~-~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 182 (451)
T 3c8t_A 104 TQDIMDTATVLQIRDGLA-LISRRIESVRKALAALARNHRDTPMAGRTHLQHALPVTFGYKAAVWLSAFDRHAARLEEIS 182 (451)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCceeecccCCCCceeehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++++.+|||| |+||+.+..+ +++.+++++++.|||+.++.+ |+.+||++++++++++.++++|+|||+||++|+
T Consensus 183 ~~~~~~~lGg-AvGT~~~~~~-~~~~~~~~~a~~LGl~~~~~~----~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~ 256 (451)
T 3c8t_A 183 PRVLVVEFSG-ASGTLASLGT-RGLDVQRELARELNLGVPSIT----WHSARDAVAETVQFLALVSGSLGKLAMDISIMM 256 (451)
T ss_dssp HHHCBCCCCC-TTSSCGGGTT-CHHHHHHHHHHHHTCBCCSSC----CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhcccCCch-hhhcCccccc-ccHHHHHHHHHHhCCCCCCCC----CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 8999988755 888999999999999987554 467999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHH
Q 015619 239 SGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 239 s~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
++|||||.+|. +++|||||||||||+.+|.++++|++++|++++++. +...++++|...|.+.|.+++++..+.
T Consensus 257 ---~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~ 332 (451)
T 3c8t_A 257 ---TTELGEVAEPFVRHRGASSTMPQKQNPVSCELILAGARIVRNHATSMLD-AMIHDFERATGPWHLEWSAVPEGFAVA 332 (451)
T ss_dssp ---STTTCCEECC---------------CCHHHHHHHHHHHHHHHHHHHHHH-HTCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ---CccccccccccccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHh-cCchhhcccccchHHHHHHHHHHHHHH
Confidence 67999999996 689999999999999999999999999999999864 466799999888888888887666666
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhhHH------HhhCccccHHHHHHHH----HHHHHcCCCHHHHHHhc----C
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPKIGYDNAAAVA----KKAHKEGTTLKDAALKL----G 382 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~------~~la~~lg~~~a~~~~----~~a~~~g~~l~e~~~~~----~ 382 (403)
+.++.+..+|+++|+||++||+++++.+.+++ +.|++++||++||+++ +.|.++|.+|+|++.++ +
T Consensus 333 ~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~l~~~L~~~ig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~~ 412 (451)
T 3c8t_A 333 SGILYQAEFMLGGLQVFPDRMRENLDHSRGLIVAEAVMMALAPHTGRKEAHDIVYLGCRRAVEDKTGLFEVLRTMPEVAK 412 (451)
T ss_dssp HHHHHHHHHHHHSCEECHHHHHHHHTTTTTGGGHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhCcCEECHHHHHHHHHhccChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCHHHHHhcChhhhc
Confidence 66666678999999999999999998666654 5677779999999755 78889999999998876 6
Q ss_pred CCCHHHHhhcCCcccccCCC
Q 015619 383 VLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 383 ~l~~~~l~~~ldp~~~vg~~ 402 (403)
.++++++++++||..|+|++
T Consensus 413 ~l~~~~l~~~ldp~~~~~~~ 432 (451)
T 3c8t_A 413 PLGEEALRDLTDPRNYLGSA 432 (451)
T ss_dssp HHCHHHHHHHTCGGGCCTTH
T ss_pred cCCHHHHHHhCCHHHHhchH
Confidence 78999999999999999975
No 14
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=100.00 E-value=4.6e-78 Score=611.70 Aligned_cols=366 Identities=21% Similarity=0.226 Sum_probs=315.1
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHH--HHHHHhCCcCCCcccccccccCCCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIAN--RAAEILGHKRGEKIVHPNDHVNRSQS 78 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~--~l~~~~g~~~g~~~~h~~~~vh~g~S 78 (403)
+.| ||++++++|.++| +|+++..+.+.+ .+.|+|+++ .+.+++|+ .| .|||+|+|
T Consensus 35 ~~Gii~~~~a~~I~~a~----------~~d~~~i~~~~~----~~~~dVia~~~~l~e~~g~-~g-------~~vH~g~S 92 (429)
T 1c3c_A 35 ELGMIPKGVTERIRNNA----------KIDVELFKKIEE----KTNHDVVAFVEGIGSMIGE-DS-------RFFHYGLT 92 (429)
T ss_dssp HTTSSCTTHHHHHHHHC----------CCCHHHHHHHHH----HHCCHHHHHHHHHHHHHGG-GG-------GGTTTTCC
T ss_pred HCCCCCHHHHHHHHHhC----------CCCHHHHHHHHh----ccCCChHHHHHHHHHHcCc-cc-------ccccCCCC
Confidence 579 9999999999996 122222222222 134555544 56788883 34 45668899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 79 SNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 79 ~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
|||+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++
T Consensus 93 snD~~~Ta~~l~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 171 (429)
T 1c3c_A 93 SSDVLDTANSLALVEAGK-ILLESLKEFCDVLWEVANRYKHTPTIGRTHGVHAEPTSFGLKVLGWYSEMKRNVQRLERAI 171 (429)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecCcCCCcCcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++++.+|||| |+||+.+.+ +.+++++++.|||+.++ .| ||+.+||++++++++++.++++|+|||+||++|+
T Consensus 172 ~~~~~~~lGg-AvGt~~~~~----~~~~~~~a~~LGl~~~~-~~--d~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~ 243 (429)
T 1c3c_A 172 EEVSYGKISG-AVGNYANVP----PEVEEKALSYLGLKPEP-VS--TQVVPRDRHAFYLSTLAIVAAGIERIAVEIRHLQ 243 (429)
T ss_dssp HHTCEECCCC-TTSSCSSSC----HHHHHHHHHHTTCEECS-SC--SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhccCCCch-hhcCCccCC----HHHHHHHHHHcCCCCCC-CC--cCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 899988764 46788999999999764 33 6788999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHH
Q 015619 239 SGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 239 s~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
++||||+.+|. +++|||||||||||+.+|.++++|+++.|++.+++. +..+++|+|...|.+.|.+++++..+.
T Consensus 244 ---~~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~ 319 (429)
T 1c3c_A 244 ---RTEVLEVEEPFRKGQRGSSAMPHKKNPITCERLTGLSRMMRAYVDPSLE-NIALWHERDISHSSVERYVFPDATQTL 319 (429)
T ss_dssp ---STTTCSEECCCCC-----CCCTTCCCCHHHHHHHHHHHHHHHTHHHHHH-TTCCSTTCCSHHHHHHHHHHHHHHHHH
T ss_pred ---ccccchhccccccCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-cCCccccccccccHHHHHHHHHHHHHH
Confidence 67999999996 589999999999999999999999999999998865 457899999999988888887777777
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhhHH------HhhCcc-ccHHHHHH----HHHHHHHcCCCHHHHHHhc----
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPK-IGYDNAAA----VAKKAHKEGTTLKDAALKL---- 381 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~------~~la~~-lg~~~a~~----~~~~a~~~g~~l~e~~~~~---- 381 (403)
+.++.+..+|+++|+||++||+++++.+++++ +.|.++ +||++||+ +++.+.++|.+|+|++.++
T Consensus 320 ~~~l~~~~~~l~~l~vn~erm~~~l~~s~~~~~a~~la~~L~~~gig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~ 399 (429)
T 1c3c_A 320 YYMIVTATNVVRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYLLEDEEVK 399 (429)
T ss_dssp HHHHHHHHHHHHHCEECHHHHHHHHTTTTTGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHCcCeeCHHHHHHHHHhccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHhCChhhh
Confidence 77777788999999999999999998666654 567776 99999995 5778888999999999887
Q ss_pred CCCCHHHHhhcCCcccccCCC
Q 015619 382 GVLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 382 ~~l~~~~l~~~ldp~~~vg~~ 402 (403)
+.++++++++++||.+|+|++
T Consensus 400 ~~l~~~~l~~~ldp~~~~~~a 420 (429)
T 1c3c_A 400 KLVTKEELEELFDISYYLKHV 420 (429)
T ss_dssp TTCCHHHHHHTTCTHHHHTTH
T ss_pred ccCCHHHHHHhCCHHHHhhhH
Confidence 789999999999999999975
No 15
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=100.00 E-value=7.5e-78 Score=611.91 Aligned_cols=367 Identities=20% Similarity=0.185 Sum_probs=319.7
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHH--HHHHHhC-CcCCCcccccccccCCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIAN--RAAEILG-HKRGEKIVHPNDHVNRSQ 77 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~--~l~~~~g-~~~g~~~~h~~~~vh~g~ 77 (403)
++| ||++++++|.++| .|+++..+.+.+ .+.|+|+++ .+.+++| ++. |.|||+|+
T Consensus 45 ~~G~i~~~~a~~I~~a~----------~~d~~~i~~~~~----~~~~dVia~~~~l~e~~g~g~~-------g~~vH~g~ 103 (444)
T 2pfm_A 45 ELGDIPKEDVKKIREHA----------SFDIDRIYEIEK----ETRHDVVAFTRAVSETPALGEE-------RKWVHYGL 103 (444)
T ss_dssp HHTSSCHHHHHHHHHHC----------CCCHHHHHHHHH----HHCCHHHHHHHHHHTCTTCCGG-------GGGTTTTC
T ss_pred HCCCCCHHHHHHHHHhC----------CCCHHHHHHHhc----cCCCCHHHHHHHHHHHcCCCcc-------cccccCCC
Confidence 579 9999999999996 122222222222 245665555 5567774 333 35677889
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhh
Q 015619 78 SSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICC 157 (403)
Q Consensus 78 S~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~ 157 (403)
||||+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.++
T Consensus 104 SsnDv~~Ta~~L~lr~~l~-~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~ 182 (444)
T 2pfm_A 104 TSTDVVDTALSYILKQANE-IILKDLENFVSILANKAKEHKYTIMMGRTHGVHAEPTTFGLKLGLWYEEMKRNVERFKQA 182 (444)
T ss_dssp CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecccCCccceeccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015619 158 LPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLL 237 (403)
Q Consensus 158 ~~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~ 237 (403)
+++++.+|||| |+||+.+.+ +.+++++++.|||+.++ .| ||+.+||++++++++++.++++|+|||+||++|
T Consensus 183 ~~~~~~~~lGg-AvGt~~~~~----~~~~~~~a~~LGl~~~~-~~--d~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll 254 (444)
T 2pfm_A 183 ANTVRVGKLSG-AVGTYANID----PFVEKYVCENLGLEAAP-IS--TQTLQRDRHAHYMSTLALIATSIEKMAVEIRGL 254 (444)
T ss_dssp HHHTCEECCCC-TTSSCTTSC----HHHHHHHHHHTTCEECS-SC--SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccCCch-hhccCCcCC----HHHHHHHHHHhCCCCCC-CC--cCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 899988764 46788999999999764 33 678899999999999999999999999999999
Q ss_pred ccCCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHH
Q 015619 238 GSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLL 315 (403)
Q Consensus 238 ~s~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 315 (403)
+ ++||||+.+|. +++|||||||||||+.+|.++++|+++.|++.+++.. ..+++|+|...|.+.|.+++++..+
T Consensus 255 ~---~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~l~~~~~~ 330 (444)
T 2pfm_A 255 Q---KSETREVEEAFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGYMMTAYEN-VPLWHERDISHSSAERVILPDATIA 330 (444)
T ss_dssp T---STTTCSEECCCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHT-SCCCTTCCSHHHHHHHHHHHHHHHH
T ss_pred h---cccccccccccccCCCcCccCCcccCCHHHHHHHHHHHHHHHHHHHHHHh-CcccccccccchHHHHHHHHHHHHH
Confidence 9 67999999996 6899999999999999999999999999999988654 5789999999998888889777777
Q ss_pred HHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHH------HhhCcc-ccHHHHHH----HHHHHHHcCCCHHHHHHhc---
Q 015619 316 GDASASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPK-IGYDNAAA----VAKKAHKEGTTLKDAALKL--- 381 (403)
Q Consensus 316 ~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~------~~la~~-lg~~~a~~----~~~~a~~~g~~l~e~~~~~--- 381 (403)
.+.++.+..+|+++|+||++||+++++.+++++ +.|.++ +||++||+ +++.+.++|.+|+|++.++
T Consensus 331 ~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~la~~L~~~gig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~ 410 (444)
T 2pfm_A 331 LNYMLNRFGNIVKNLTVYPENMKRNMTRTYGLIYSQRVMLTLIDKGMVREEAYDIVQPKAMEAWETQVQFKELVEADERI 410 (444)
T ss_dssp HHHHHHHHHHHHHTCEECHHHHHHHHTTTTTGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHccCEECHHHHHHHHHhCcCchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCCHHHHHhcchhh
Confidence 777777778999999999999999998776654 667776 99999995 5778889999999999887
Q ss_pred -CCCCHHHHhhcCCcccccCCC
Q 015619 382 -GVLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 382 -~~l~~~~l~~~ldp~~~vg~~ 402 (403)
+.++++++++++||.+|+|++
T Consensus 411 ~~~l~~~~l~~~ldp~~~~~~a 432 (444)
T 2pfm_A 411 TSKLTQEEINECFNYEHHMQHV 432 (444)
T ss_dssp HTTSCHHHHHHHTCGGGGGTTH
T ss_pred hccCCHHHHHHhCCHHHHHhHH
Confidence 789999999999999999975
No 16
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-77 Score=613.04 Aligned_cols=367 Identities=25% Similarity=0.326 Sum_probs=324.5
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++|++|.++...++|++++ .++|+|++ +|+++++++| +.| .|||+|+|||
T Consensus 48 ~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~~~~----~~~dv~~~----~~~~l~e~~g-~~g-------~~vH~g~Ssn 111 (462)
T 2e9f_A 48 AVGLLSAEELEAILKGLDRIEEEIEAGTFPWRE----ELEDVHMN----LEARLTELVG-PPG-------GKLHTARSRN 111 (462)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHTCSCCCG----GGCSHHHH----HHHHHHHHHC-TTH-------HHHTTTCCHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHhhHhcccCCcCC----CCCchHHH----HHHHHHHHcc-ccc-------cceecCCChh
Confidence 579 99999999999999999876677888876 36778888 8899999998 454 3566789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc--ceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDI--VKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~--~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
|+++|+++|++|+.+. .|.+.|..|+++|.++|++|+++ +||||||+|+||||||||||++|+++|.||++||.+++
T Consensus 112 Dv~~Ta~~l~lr~~l~-~l~~~l~~L~~~L~~~A~~~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 190 (462)
T 2e9f_A 112 DQVATDLRLYLRGAID-ELLALLLALRRVLVREAEKHLDPLYVLPGYTHLQRAQPVLLAHWFLAYYEMLKRDAGRLEDAK 190 (462)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCcCccccCcccCccCeeccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 99999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015619 159 PRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLL 237 (403)
Q Consensus 159 ~~~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~ 237 (403)
++++.+||||+|+ ||+++.++ +++++.|||+. +..|++||+++||++++++++++.++++|+|||+||++|
T Consensus 191 ~~~~~~~lGgaA~aGt~~~~~~-------~~~a~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll 262 (462)
T 2e9f_A 191 ERLNESPLGAAALAGTGFPIDR-------HFTARELGFKA-PMRNSLDAVASRDFALEVLSALNIGMLHLSRMAEELILY 262 (462)
T ss_dssp HHHCEECTTCCSSSCCSSCCCH-------HHHHHHTTCSE-ECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccCccccccccCCCCCCH-------HHHHHHhCCCC-CCCCcHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887 99988876 46999999995 579999999999999999999999999999999999999
Q ss_pred ccCCCCcceeEEcCCCC-CCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccC--ccccccchhhHHHHhHHHHHHH
Q 015619 238 GSGPRCGLGELILPENE-PGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN--GHFELNVFKPMIASGLLHSLRL 314 (403)
Q Consensus 238 ~s~~~~e~gev~~~~~~-~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~~~~~ 314 (403)
+|+ |||||++|+.. +|||||||||||+.+|.++++|+++.|++.++++...+ .+++++.... ...+++++..
T Consensus 263 ~s~---e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~rDl~~~--~~~l~~s~~~ 337 (462)
T 2e9f_A 263 STE---EFGFVEVPDAFATGSSIMPQKKNPDILELIRAKAGRVLGAFVGLSAVVKGLPLAYNKDLQED--KEPLLDALAT 337 (462)
T ss_dssp TST---TTCCEECCGGGCEECSSSSSCEECHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSBCGGGGGG--HHHHHHHHHH
T ss_pred hCC---CCCcEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCchHhhhchhhh--HhHHHHHHHH
Confidence 976 69999999875 59999999999999999999999999999999753332 4555554332 1247788888
Q ss_pred HHHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccc-----cHHHH----HHHHHHHHHcCCCHHHHHHhc----
Q 015619 315 LGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKI-----GYDNA----AAVAKKAHKEGTTLKDAALKL---- 381 (403)
Q Consensus 315 ~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~l-----g~~~a----~~~~~~a~~~g~~l~e~~~~~---- 381 (403)
+..++..+. .++++|+||++||++++..+++++|+|++.+ ||++| .+++++|.++|++|+|++.++
T Consensus 338 ~~~~l~~~~-~~l~gl~vn~e~m~~~l~~~~~~at~l~~~Lv~~G~~~r~ay~~v~~~~~~a~~~g~~l~e~~~~~~~~~ 416 (462)
T 2e9f_A 338 YRDSLRLLA-ALLPGLKWRRERMWRAAEGGYTLATELADYLAEKGLPFREAHHVVGRLVRRLVEEGRALKDLTLEELQAH 416 (462)
T ss_dssp HHHHHHHHH-HHGGGCEECHHHHHHHHSCSSTTHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHH
T ss_pred HHHHHHHHH-HHhCcCEECHHHHHHHHhcCccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHh
Confidence 888888885 6999999999999999999999999988875 45555 567788889999999977665
Q ss_pred -CCCCHHHHhhcCCcccccC
Q 015619 382 -GVLNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 382 -~~l~~~~l~~~ldp~~~vg 400 (403)
+.++ +++++++||..++.
T Consensus 417 ~~~l~-~~l~~~ldp~~~~~ 435 (462)
T 2e9f_A 417 HPLFA-EDALPLLRLETAIH 435 (462)
T ss_dssp CTTCC-GGGGGGGSHHHHTT
T ss_pred hhhhH-HHHHHhCCHHHHHh
Confidence 7787 68999999999994
No 17
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=2.3e-77 Score=609.92 Aligned_cols=368 Identities=20% Similarity=0.259 Sum_probs=321.3
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++|++|.++...++|++++. +++|+||+ +++++.+++|+ .| .|||+|+|||
T Consensus 46 ~~Gii~~~~a~~I~~a~~~i~~~~~~~~~~~~~~---~~~dv~~~----v~~~l~e~~g~-~g-------~~vH~g~Ssn 110 (457)
T 1tj7_A 46 TVGVLTAEEQAQLEEALNVLLEDVRARPQQILES---DAEDIHSW----VEGKLIDKVGQ-LG-------KKLHTGRSRN 110 (457)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHCGGGGGGS---CCSSHHHH----HHHHHHHHHGG-GG-------GGTTTTCCHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHhhHhcCCcCcCCC---CCCcHHHH----HHHHHHHHccc-cc-------cceecCCChh
Confidence 579 999999999999999987666677887742 57888888 77899999983 44 4566889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++
T Consensus 111 D~~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 189 (457)
T 1tj7_A 111 DQVATDLKLWCKDTVS-ELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKR 189 (457)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCeeeccccCcCCeechHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++.+||||+|+ ||++++++ +++++.|||+. +..|++||+++||++++++++++.++++|+|||+||++|+|
T Consensus 190 ~~~~~lGgaA~aGt~~~~~~-------~~la~~LGl~~-~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s 261 (457)
T 1tj7_A 190 LDVSPLGCGALAGTAYEIDR-------EQLAGWLGFAS-ATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNT 261 (457)
T ss_dssp HCCBCTTCTTTTCCSSCCCH-------HHHHHHHTCSS-BCSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hhhcCccccccCCCCCCCCH-------HHHHHHcCCCC-CCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999887 99988876 47999999996 57999999999999999999999999999999999999997
Q ss_pred CCCCcceeEEcCCCC-CCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccC--ccccccchhhHHHHhHHHHHHHHH
Q 015619 240 GPRCGLGELILPENE-PGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN--GHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 240 ~~~~e~gev~~~~~~-~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
+ |||||++|+.. +|||||||||||+.+|.++++|+++.|++.++++...+ .+++++.... ...+++++..+.
T Consensus 262 ~---e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~RDl~~~--~~~l~~s~~~~~ 336 (457)
T 1tj7_A 262 G---EAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQED--KEGLFDALDTWL 336 (457)
T ss_dssp T---TTCCEECCGGGCBCCTTCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSCCGGGGGH--HHHHHHHHHHHH
T ss_pred C---CCCceeccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHhhcchhhH--HhHHHHHHHHHH
Confidence 5 69999999874 79999999999999999999999999999998654333 4555553321 124677888888
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccc---c--HHHHH----HHHHHHHHcCCCHHHHHHhc-C---C
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKI---G--YDNAA----AVAKKAHKEGTTLKDAALKL-G---V 383 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~l---g--~~~a~----~~~~~a~~~g~~l~e~~~~~-~---~ 383 (403)
.++..+. .|+++|+||++||++|+..+++++++|++.+ | |++|| ++++.|.++|++|+|++.++ . .
T Consensus 337 ~~l~~~~-~~l~gl~vn~~~m~~~l~~~~~~at~l~~~Lv~~G~~~r~Ay~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~ 415 (457)
T 1tj7_A 337 DCLHMAA-LVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQ 415 (457)
T ss_dssp HHHHHHH-HHHTTCEECHHHHHHHHTSTTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCGGGSCHHHHTTTCT
T ss_pred HHHHHHH-HHHccCEECHHHHHHHHhcCCchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHhh
Confidence 8888885 5999999999999999999999999887765 4 66665 56778888999999977665 3 2
Q ss_pred CCHHHHhhcCCccccc
Q 015619 384 LNSEEFDNLVVPEKMI 399 (403)
Q Consensus 384 l~~~~l~~~ldp~~~v 399 (403)
+.++|+++++||..++
T Consensus 416 ~~~~~l~~~ldp~~~v 431 (457)
T 1tj7_A 416 VIDEDVYPILSLQSCL 431 (457)
T ss_dssp TCCTTHHHHTSHHHHH
T ss_pred hcHHHHHHhCCHHHHH
Confidence 3466899999999988
No 18
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=100.00 E-value=1.7e-77 Score=612.65 Aligned_cols=366 Identities=19% Similarity=0.246 Sum_probs=322.9
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++|++|.++...++|++++ .++|+||+ +|+++++++| +.| .|||+|+|||
T Consensus 53 ~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~~~~----~~~dv~m~----~~~~l~e~~g-~~g-------~~vH~g~Ssn 116 (468)
T 1k7w_A 53 KAGILTKTELEKILSGLEKISEEWSKGVFVVKQ----SDEDIHTA----NERRLKELIG-DIA-------GKLHTGRSRN 116 (468)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHTCCCCCT----TCCSHHHH----HHHHHHHHHC-GGG-------GGGGTTCCHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHhhhhcccCccCC----CCCchHHH----HHHHHHHHcc-ccc-------cceecCCChh
Confidence 579 99999999999999999776677888876 46788888 8999999998 555 3566789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
|+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++
T Consensus 117 Dv~~Ta~~l~lr~~l~-~l~~~L~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 195 (468)
T 1k7w_A 117 DQVVTDLKLFMKNSLS-IISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALTRDSERLGEVKKR 195 (468)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCEeeccccCcCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccc-cCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015619 161 MYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGS 239 (403)
Q Consensus 161 ~~~~~lGg~a~-Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s 239 (403)
++.+||||+|+ ||+++.++ +++++.|||+. +..|++||+++||++++++++++.++++|+|||+||++|+|
T Consensus 196 ~~~~~lGgaA~aGt~~~~~~-------~~la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~s 267 (468)
T 1k7w_A 196 INVLPLGSGALAGNPLDIDR-------EMLRSELEFAS-ISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYST 267 (468)
T ss_dssp HSEECTTCTTTTCCTTCCCH-------HHHHHHHTCSE-ECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HhhcCcccccccCCCCCCCh-------HHHHHHcCCCC-CCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999887 99988776 57999999995 57999999999999999999999999999999999999997
Q ss_pred CCCCcceeEEcCCCC-CCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccC--ccccccchhhHHHHhHHHHHHHHH
Q 015619 240 GPRCGLGELILPENE-PGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN--GHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 240 ~~~~e~gev~~~~~~-~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
+ |||||++|+.. +|||||||||||+.+|.++++|+++.|++.++++...+ .+++++.... ...+++++..+.
T Consensus 268 ~---e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~rDl~~~--~~~l~~s~~~~~ 342 (468)
T 1k7w_A 268 S---EFGFLTLSDAFSTGASLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQED--KEAVFDVVDTLT 342 (468)
T ss_dssp T---TTCCEECCGGGCEEETTEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGGGH--HHHHHHHHHHHH
T ss_pred C---CCCceeccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhCCchHhhhhhhhh--HhHHHHHHHHHH
Confidence 5 69999999875 59999999999999999999999999999998754332 4555554332 134778888888
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhhHHHhhCccc-----cHHHHH----HHHHHHHHcCCCHHHHHHhc-----C
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKI-----GYDNAA----AVAKKAHKEGTTLKDAALKL-----G 382 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~~~la~~l-----g~~~a~----~~~~~a~~~g~~l~e~~~~~-----~ 382 (403)
.++..+. .++++|+||++||++++..+ +++++|++.+ ||++|| ++++.|.++|++|+|++.++ +
T Consensus 343 ~~l~~~~-~~l~gl~vn~e~m~~~l~~~-~~at~l~~~Lv~~G~~~r~ay~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~ 420 (468)
T 1k7w_A 343 AVLQVAT-GVISTLQISKENMEKALTPE-MLATDLALYLVRKGVPFRQAHTASGKAVHLAETKGITINKLSLEDLKSISP 420 (468)
T ss_dssp HHHHHHH-HHHHHCEECHHHHHHTCCGG-GGHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHTTTCCGGGCCHHHHHHHCT
T ss_pred HHHHHHH-HHhCCCEECHHHHHHHhhCC-ChHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 8888885 69999999999999999999 9999887654 555555 56778888999999987665 7
Q ss_pred CCCHHHHhhcCCcccccC
Q 015619 383 VLNSEEFDNLVVPEKMIG 400 (403)
Q Consensus 383 ~l~~~~l~~~ldp~~~vg 400 (403)
.++ +++++++||..++.
T Consensus 421 ~l~-~~~~~~ldp~~~~~ 437 (468)
T 1k7w_A 421 QFS-SDVSQVFNFVNSVE 437 (468)
T ss_dssp TCC-GGGGGGSCHHHHHT
T ss_pred hhH-HHHHHhCCHHHHHh
Confidence 787 68999999999984
No 19
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=100.00 E-value=1.1e-73 Score=574.71 Aligned_cols=340 Identities=20% Similarity=0.231 Sum_probs=285.3
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHH--HHHHHhCCcCCCcccccccccCCCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIAN--RAAEILGHKRGEKIVHPNDHVNRSQS 78 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~--~l~~~~g~~~g~~~~h~~~~vh~g~S 78 (403)
+.| ||++++++|.++ +|+++..+.+.++ +.|+|+++ .+.+++| | .|||+|+|
T Consensus 41 ~~Gii~~~~a~~I~~a-----------~~d~~~~~~~~~~----~~~dVia~~~~l~e~~G---g-------~~vH~g~S 95 (403)
T 1dof_A 41 ELGVAERGCCEKVNKA-----------SVSADEVYRLERE----TGHDILSLVLLLEQKSG---C-------RYVHYGAT 95 (403)
T ss_dssp HTTSSCTTHHHHHHHC-----------CCCTTTC------------CHHHHHHHHHHHHHC---C-------SCTTTTCC
T ss_pred HCCCCCHHHHHHHHHC-----------CCCHHHHHHHhhc----cCCcHHHHHHHHHHHcC---C-------CcccCCCC
Confidence 579 999999999877 2445555554443 55666655 5578886 3 25667899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhh
Q 015619 79 SNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCL 158 (403)
Q Consensus 79 ~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~ 158 (403)
|||+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.|| +||.+++
T Consensus 96 snD~~~Ta~~l~~r~~l~-~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~-~rL~~~~ 173 (403)
T 1dof_A 96 SNDIIDTAWALLIRRALA-AVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYYYELYIA-CRQLALA 173 (403)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeeccccCcccccCcHHHHHHHHHHHHHHH-HHHHHHH
Confidence 999999999999999997 99999999999999999999999999999999999999999999999999999 9999999
Q ss_pred hhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhh-hchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015619 159 PRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALA-AHDAFVETSGALNTVAASLMKIANDVRLL 237 (403)
Q Consensus 159 ~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~-~rd~~~~~~~~l~~~~~~l~kia~Dl~~~ 237 (403)
++++.+|||| |+||+.+.++ +++.+++++++.|||+.++.+ |+. +||++++++++++.++++|+|||+||++|
T Consensus 174 ~~~~~~~lGg-AvGt~~~~~~-~~~~~~~~~a~~lGl~~~~~~----~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll 247 (403)
T 1dof_A 174 EEFIRAKIGG-AVGTMASWGE-LGLEVRRRVAERLGLPHHVIT----TQVAPRESFAVLASALALMAAVFERLAVEIREL 247 (403)
T ss_dssp HHHCCBCCCC-TTSSCGGGGG-GHHHHHHHHHHHTTCCBCSSC----SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccCccH-HHhhCccccc-ccHHHHHHHHHHhCcCCCCCc----chhhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 8999987655 888899999999999986544 477 99999999999999999999999999999
Q ss_pred ccCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHH
Q 015619 238 GSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGD 317 (403)
Q Consensus 238 ~s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 317 (403)
+ ++|||||++| + +|||||||||||+.+|.++++|++++|++.+++. +...++|+|...|...|..++++..+.+
T Consensus 248 ~---~~e~~ei~lp-~-~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~~ 321 (403)
T 1dof_A 248 S---RPEIGEVVEG-G-GGSSAMPHKANPTASERIVSLARYVRALTHVAFE-NVALWHERDLTNSANERVWIPEALLALD 321 (403)
T ss_dssp T---STTTCSEESC-C----------CCCHHHHHHHHHHHHHHHHHHHHHH-TTCCCTTCCGGGHHHHHHHHHHHHHHHH
T ss_pred h---CCccCeEeCC-C-CccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH-cCcccccccccchHHHHHHHHHHHHHHH
Confidence 9 6799999999 7 9999999999999999999999999999998855 5668999998888877777766666656
Q ss_pred HHHHHHHhhhhcCccCHHHHHHHhhhhhhHH------HhhCcc-ccHHHHHHHHH----HHHHcCC-CHHHHHHh
Q 015619 318 ASASFEKNCVRGIQANRERISKLLHESLMLV------TSLNPK-IGYDNAAAVAK----KAHKEGT-TLKDAALK 380 (403)
Q Consensus 318 ~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~------~~la~~-lg~~~a~~~~~----~a~~~g~-~l~e~~~~ 380 (403)
.++.+..+|+++|+||++||+++++.+.+++ +.|.++ +||++||+++. +|.++|+ +++|++.+
T Consensus 322 ~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~a~~l~~~L~~~gig~~~A~~iv~~~~~~a~~~g~~~l~e~~~~ 396 (403)
T 1dof_A 322 EILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIED 396 (403)
T ss_dssp HHHHHHHHHHHHCEECHHHHHHHHHHHHHHHCHHHHHHHHHHTTCCHHHHHHHHTTCCCCCCGGGGCCHHHHHHH
T ss_pred HHHHHHHHHHCcCEECHHHHHHHHHhccCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCcCHHHHHHH
Confidence 6666668999999999999999998777776 677786 99999999866 7778998 99998765
No 20
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=100.00 E-value=1.8e-72 Score=570.32 Aligned_cols=361 Identities=18% Similarity=0.194 Sum_probs=291.6
Q ss_pred CCC-CCHHHHHHHHHHHH----HHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQ----EVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRS 76 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g 76 (403)
+ | ||++++++|.++++ ++.+. ....+.+|+. ++..+.+.+|++.| .|||+|
T Consensus 36 ~-GlIp~~~~~~i~~~~~~d~~~i~~~---------------e~~~~hdV~a-~~~~l~e~~g~~~~-------~~iH~G 91 (438)
T 4eei_A 36 D-RMVPKGTAAEIRARAQIRPERVDEI---------------EKVTKHDIIA-FCTSIAEQFTAETG-------KFFHFG 91 (438)
T ss_dssp G-TTSCTTHHHHHHHHCCCCHHHHHHH---------------HHHHSCHHHH-HHHHHHTTSCTTTT-------TTTTCS
T ss_pred c-CCCCHHHHHHHHhhCCCCHHHHHHH---------------HHhcCCCHHH-HHHHHHHHcCHHhh-------cccCCC
Confidence 5 9 99999999988741 12110 0011334553 66788888875334 466678
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHh
Q 015619 77 QSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVIC 156 (403)
Q Consensus 77 ~S~nD~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~ 156 (403)
+||||+++|+++|++|+.+. .|.+.|..|+++|.++|++|++++||||||+||||||||||||++|+++|.||++||.+
T Consensus 92 ~SsnDv~~Ta~~L~lr~~~~-~l~~~L~~l~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~ 170 (438)
T 4eei_A 92 VTSSDIIDSALSLQIRDSMS-YVIKDLEALCDSLLTKAEETKEIITMGRSHGMFAEPMSFGQKFLGAYVEFKRRLKDLKD 170 (438)
T ss_dssp CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEETHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcccccccCccCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999996 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015619 157 CLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRL 236 (403)
Q Consensus 157 ~~~~~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~ 236 (403)
++++++.+|||| |+||++++++ ++++++++.|||+.. +++ +++.+||++++++++++.++++|+|||+||++
T Consensus 171 ~~~~~~~~~lgG-AvGT~~~~~~----~~~~~~a~~LG~~~~--~~~-~~v~~rD~~~e~~~~l~~~a~~L~kia~Di~l 242 (438)
T 4eei_A 171 FQKDGLTVQFSG-AVGNYCILTT----EDEKKAADILGLPVE--EVS-TQVIPRDRIAKLISIHGLIASAIERLAVEIRH 242 (438)
T ss_dssp HHHTTCCBCCCC-TTSCCSSSCH----HHHHHHHHHHTCCBC--SSC-SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHhcCcc-HhhCcccccH----HHHHHHHHHcCCCCC--Ccc-ccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999997 8999988765 456789999999853 343 47899999999999999999999999999999
Q ss_pred hccCCCCcceeEEcC--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHH
Q 015619 237 LGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRL 314 (403)
Q Consensus 237 ~~s~~~~e~gev~~~--~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 314 (403)
|+ ++|||||.+| ++++|||||||||||+.+|.++++|++++|++.+. +.....+++++...+..+|.+++++..
T Consensus 243 l~---~~e~gel~~~f~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~-~~~~~~~~erdl~~~~~er~~l~~~~~ 318 (438)
T 4eei_A 243 LH---RSDVFEVYEGFSKGQKGSSTMPHKKNPISTENLTGMARMLRSHVSIA-LENCVLWHERDISHSSAERFYLPDNFG 318 (438)
T ss_dssp HH---STTTCSEECCC------------CCCCHHHHHHHHHHHHHHHHHHHH-HHTTCCCTTCCSHHHHHHHHHHHHHHH
T ss_pred Hh---ccccceeccccccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHH-HhccchhcCccchhhHHHHHHHHHHHH
Confidence 99 6799999998 56899999999999999999999999999998654 456667888888878788889999999
Q ss_pred HHHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHH--HhhCc-----cccHHHHHHHH----HHHHHcCCCHHHHHHhc--
Q 015619 315 LGDASASFEKNCVRGIQANRERISKLLHESLMLV--TSLNP-----KIGYDNAAAVA----KKAHKEGTTLKDAALKL-- 381 (403)
Q Consensus 315 ~~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~--~~la~-----~lg~~~a~~~~----~~a~~~g~~l~e~~~~~-- 381 (403)
+.++++.+..+++++|+||++||++|++.+++++ ++++. .+||++||+++ ++|.+ |++|+|++.++
T Consensus 319 ~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~~~a~~~a~~Lv~~g~~~~~Ah~~v~~~~~~a~~-g~~l~e~~~~~~~ 397 (438)
T 4eei_A 319 IMVYALRRMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPFMREDCYKIVQQVAFDLKQ-GESFSKKLQKVMH 397 (438)
T ss_dssp HHHHHHHHHHHHHHHCEECHHHHHHHHHHCCTTHHHHHHHHHHHHSSCCHHHHHHHHHHC--------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHh
Confidence 9999998889999999999999999999776654 44433 36899988654 56777 99999988762
Q ss_pred ----C--CCCHHHHhhcCCcccccCCC
Q 015619 382 ----G--VLNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 382 ----~--~l~~~~l~~~ldp~~~vg~~ 402 (403)
. .+++++++++|| .|.|++
T Consensus 398 ~~~~~~~~~~~~~~~~~~d--~~gG~a 422 (438)
T 4eei_A 398 DEHNIILDIPEMDFEGIKK--TYLKEI 422 (438)
T ss_dssp HTTCCCCCCCCCSHHHHHH--HHTTTH
T ss_pred hhhccccCCCHHHHHHHHH--hcCCch
Confidence 2 467888999999 777764
No 21
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=100.00 E-value=6.9e-73 Score=578.10 Aligned_cols=371 Identities=16% Similarity=0.156 Sum_probs=316.7
Q ss_pred HHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChhhHHHHH
Q 015619 7 PAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTV 86 (403)
Q Consensus 7 ~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~nD~~~Ta 86 (403)
++++++|.++|+++..+ +++..++++ +..+++|++ |+..+.+++|. .|+ ..|+++|||+|+||||+++|+
T Consensus 61 ~~~a~~I~~~~~~i~~g------~~~~~~~~~-~~~~~dv~a-v~~~l~e~~g~-~g~-~~~~~~~vH~g~SsnDv~~Ta 130 (462)
T 2ptr_A 61 ADAIGYLDAIVASFSEE------DAARIKTIE-RTTNHDVKA-VEYFLKEKVAE-IPE-LHAVSEFIHFACTSEDINNLS 130 (462)
T ss_dssp HHHHHHHHHHHHTCCHH------HHHHHHHHH-HHHSCHHHH-HHHHHHHHHTT-SHH-HHTTGGGTTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccC------CHHHHHhhc-cccCCCHHH-HHHHHHHHhcc-ccC-CcchhhhccCCCCHHHHHHHH
Confidence 89999999999765432 123333333 566889966 45667799983 542 358899999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhhhhhcC
Q 015619 87 MHIAAAMETNSR-LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLA 165 (403)
Q Consensus 87 ~~l~~~~~l~~~-l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~ 165 (403)
++|++|+.+. . |.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++ ..++
T Consensus 131 ~~L~lr~~l~-~~l~~~L~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~---~~~~ 206 (462)
T 2ptr_A 131 HALMLKTARD-EVILPYWRQLIDGLKDLAVQYRDIPLLSRTAGQPATPSTIGKEMANVAYRMERQYRQLNQVE---ILGK 206 (462)
T ss_dssp HHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC---CEEC
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHccCCEeeccccCeeceechHHHHHHHHHHHHHHHHHHHHHHH---HHhc
Confidence 9999999995 5 999999999999999999999999999999999999999999999999999999999988 3677
Q ss_pred CCcccccCCCCCCCchh----HHHHHHHHHHcCCCCCCCCchhh-HhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 166 QGGTAVGTGLNTKKGFD----VKIASAVAEETSLPFVTAENKFE-ALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 166 lGg~a~Gt~~~~~~~~~----~~~~~~la~~LG~~~~~~~n~~d-a~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
+|| |+||+.+..+.|+ .++.+.+++.|||. .|+++ ++.+||++++++++++.++++|+|||+||++|+|+
T Consensus 207 ~~G-AvGT~~~~~~~~~~~~~~~v~~~~~~~LGl~----~n~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~s~ 281 (462)
T 2ptr_A 207 ING-AVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQ----WNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIAL 281 (462)
T ss_dssp CCC-TTSSCHHHHHHCTTSCHHHHHHHHHHHTTCE----ECCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCc-hhcchhhcccccCcccHHHHHHHHHHHhCCC----CCchhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 777 9999875554555 66889999999994 56778 48999999999999999999999999999999997
Q ss_pred CCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHHH
Q 015619 241 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASA 320 (403)
Q Consensus 241 ~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 320 (403)
|+ |+| .+|++++|||||||||||+.+|.++++|+++.|++.+++.....+++|+|...|...+.++.++..+..++.
T Consensus 282 ~~--~~E-~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~~~~~~~~l~~~~~~~~~~l~ 358 (462)
T 2ptr_A 282 NH--FKQ-KTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQ 358 (462)
T ss_dssp TS--EEE-CCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCTHHHHHGGGHHHHHHHHHHHHH
T ss_pred cc--hhc-cCCCCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHHH
Confidence 53 555 345579999999999999999999999999999998886655568899998888888889999999999988
Q ss_pred HHHHhhhhcCccCHHHHHHHhhhhhhHHH-----hhCccccHHHHHHHHHHHHH----cCCCHHHHHHhcCCC--CHHHH
Q 015619 321 SFEKNCVRGIQANRERISKLLHESLMLVT-----SLNPKIGYDNAAAVAKKAHK----EGTTLKDAALKLGVL--NSEEF 389 (403)
Q Consensus 321 ~~~~~~l~~l~v~~erm~~~l~~~~~~~~-----~la~~lg~~~a~~~~~~a~~----~g~~l~e~~~~~~~l--~~~~l 389 (403)
.+. .|+++|+||++||++++..+++++| .|.+. ||++||++++++.. +|.+|+|++.+.+.. .++++
T Consensus 359 ~~~-~~l~gl~vn~e~m~~~l~~~~~~~te~~~~~l~~~-G~~~A~~iv~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~l 436 (462)
T 2ptr_A 359 STL-KGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRY-GIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARL 436 (462)
T ss_dssp HHH-HHHHHEEECHHHHHHHHTTCGGGGHHHHHHHHHHT-TCSSHHHHHHHC-----CCHHHHHHHHHTSSSCHHHHHHH
T ss_pred HHH-HHHCcCEECHHHHHHHHHcCCchHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCCcccHHHH
Confidence 886 7999999999999999999999888 45554 99999999988776 888999988765522 36789
Q ss_pred hhcCCcccccCCC
Q 015619 390 DNLVVPEKMIGPS 402 (403)
Q Consensus 390 ~~~ldp~~~vg~~ 402 (403)
+ ++||.+|+|++
T Consensus 437 ~-~ldp~~~~~~a 448 (462)
T 2ptr_A 437 K-AMTPANYIGRA 448 (462)
T ss_dssp H-TCCGGGCCTTH
T ss_pred H-hCCHHHHhChH
Confidence 9 99999999975
No 22
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=100.00 E-value=7.5e-71 Score=565.59 Aligned_cols=370 Identities=15% Similarity=0.153 Sum_probs=288.1
Q ss_pred CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChhhHHH
Q 015619 5 LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFP 84 (403)
Q Consensus 5 i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~nD~~~ 84 (403)
||++++++|.++++++..+. ..+ .....+.+|+.+++ .+.+.+| +.| .|||+|+||||+.+
T Consensus 53 i~~~~~~~I~~~l~~i~~~~---------~~~-~e~~~~~DV~a~v~-~l~e~~g-~~~-------~~iH~G~TS~Di~~ 113 (478)
T 1yis_A 53 VTQDAIDEMKSNRDVFDWPF---------IRS-EERKLKHDVMAHNH-AFGKLCP-TAA-------GIIHLGATSCFVQD 113 (478)
T ss_dssp SCHHHHHHHHHTTTCCCHHH---------HHH-HHHHSSCHHHHHHH-HHHHHCT-TTG-------GGTTTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCHHH---------Hhh-HHHhcCCcHHHHHH-HHHHhhh-hch-------hheeCCCchhhhHH
Confidence 68999999998765432211 000 01123456777788 4788887 344 45667899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 015619 85 TVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQL 164 (403)
Q Consensus 85 Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~ 164 (403)
|+..|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.++++++...
T Consensus 114 ta~~L~lr~~l~-~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~rL~~~~~~l~~l 192 (478)
T 1yis_A 114 NADLIAYRDSID-HILKRFATVIDRLAAFSLKNKEVVTVGRTHYQTASLVTVGKRGVLWAQELLMAFQSLSEFRDKMRFR 192 (478)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCeeecccCCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999997 9999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCcccccCC------CCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 165 AQGGTAVGTG------LNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 165 ~lGg~a~Gt~------~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++|| ++||+ ++.|+....++.+++++.|||+.+ ..|+. ++++||++++++++++.++++|+|||+||++|+
T Consensus 193 g~gg-~~GT~a~~~~~f~~d~~~~~~v~~~~a~~LG~~~~-~~~s~-~~~~rd~~~e~~~~l~~~a~~L~kia~Di~ll~ 269 (478)
T 1yis_A 193 GIKG-ATGTQDSFLTLFAGDESKVEALDELVTKKANFSNR-FLITG-QTYSRQQDSQLVFSLSLLGAAAKKVCTDIRVLQ 269 (478)
T ss_dssp CSCT-TTSSCHHHHHHTTTCHHHHHHHHHHHHHHTTCSCB-CSSCS-SSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccc-hhccchhhhcccCcchhhHHHHHHHHHHHhCcCCC-CCccc-cccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8887 68998 665554556788999999999964 45554 789999999999999999999999999999999
Q ss_pred cCCCCcceeEEcC--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHH
Q 015619 239 SGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 239 s~~~~e~gev~~~--~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
| ||||.+| ++++|||||||||||+.+|.++++|++++|+++++++.....++|+|...|...+..++++..+.
T Consensus 270 s-----~~el~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~er~~~~~~~~~~~l~~~~~~~ 344 (478)
T 1yis_A 270 A-----FGELLEPFEKDQIGSSAMPYKKNPMKSERCCALSRKLINAPQEALTILADQGLERTLDDSAGRRMLIPDVLLTA 344 (478)
T ss_dssp H-----TTSEECC-------------CCCCHHHHHHHHHHHHHHTSHHHHHHHHHTCCTTCCGGGHHHHHHHHHHHHHHH
T ss_pred h-----hhheeccccCCCCccccCCcccCCHHHHHHHHHHHHHHHhHHHHHHHhccCCcccCcchHHHHHHHHHHHHHHH
Confidence 5 9999999 45899999999999999999999999999999988888888899999999998898999999999
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhhH-HHh-----hCc-cccHHHHHHHHHH--------HHHcCCCHHHHHHhc
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLML-VTS-----LNP-KIGYDNAAAVAKK--------AHKEGTTLKDAALKL 381 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~-~~~-----la~-~lg~~~a~~~~~~--------a~~~g~~l~e~~~~~ 381 (403)
++++.+...|+++|+||++||++++..++++ +|+ +.. .++|++||+++++ +.++|+++.++..+.
T Consensus 345 ~~~l~~~~~~l~gl~vn~erm~~~l~~~~~~~~te~v~~~l~~~G~~~~~Ah~~v~~~a~~~~~~v~~~g~~~~~l~~~~ 424 (478)
T 1yis_A 345 EALLTTLQNIFEGLSVQTDNVKKIVEDEIAFLGLEKAMMMLTEEGVDRQQAHAVIRKTALEAKQLQATQKVDIRQTMADP 424 (478)
T ss_dssp HHHHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHHC---------------------------------CCCTTT
T ss_pred HHHHHHHHHHHcCCEECHHHHHHHHHhCCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhcCC
Confidence 9999999999999999999999999998776 444 333 2667899987643 225777744433222
Q ss_pred CC-CCHHHHhhcC-CcccccCCC
Q 015619 382 GV-LNSEEFDNLV-VPEKMIGPS 402 (403)
Q Consensus 382 ~~-l~~~~l~~~l-dp~~~vg~~ 402 (403)
.. +++++++++| ||.+|+|++
T Consensus 425 ~~~l~~~el~~~l~dp~~~~g~a 447 (478)
T 1yis_A 425 FFDSVRDRVVGLVNNPINFTGRC 447 (478)
T ss_dssp TSTTTHHHHHHHHHCGGGGSTTH
T ss_pred CCCCCHHHHHHHHhCHHHHcCcH
Confidence 33 7899999999 999999975
No 23
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=100.00 E-value=3.8e-69 Score=554.53 Aligned_cols=370 Identities=16% Similarity=0.128 Sum_probs=304.2
Q ss_pred CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChhhHHH
Q 015619 5 LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFP 84 (403)
Q Consensus 5 i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~nD~~~ 84 (403)
||++++++|.++++++.. +...+ .....+.+|+.+++ .+.+.+| +.| .|||+|+||||+.+
T Consensus 79 i~~e~~~~I~~~l~~i~~---------~~~~~-~e~~~~hDV~a~v~-~l~e~~g-~~~-------~~iH~G~TS~Di~d 139 (503)
T 2j91_A 79 ITDEQIREMKSNLENIDF---------KMAAE-EEKRLRHDVMAHVH-TFGHCCP-KAA-------GIIHLGATSCYVGD 139 (503)
T ss_dssp CCHHHHHHHHTTSSCCCH---------HHHHH-HHHHHSCHHHHHHH-HHHHHCT-TTG-------GGTTTTCCTHHHHH
T ss_pred CCHHHHHHHHHHHhhcCH---------HHHhh-hhhhcCCcHHHHHH-HHHHHhc-ccc-------ccccCCCCHhhHHH
Confidence 789999988876543221 11100 01223567777787 4788887 343 46667899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 015619 85 TVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQL 164 (403)
Q Consensus 85 Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~ 164 (403)
|+..|++|+.+. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++++.+
T Consensus 140 ta~~L~lr~al~-~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~RL~~~~~~l~~l 218 (503)
T 2j91_A 140 NTDLIILRNALD-LLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLCMDLQNLKRVRDDLRFR 218 (503)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCcEeeccccCccceecchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999997 9999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCcccccCC------CCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015619 165 AQGGTAVGTG------LNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLG 238 (403)
Q Consensus 165 ~lGg~a~Gt~------~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~ 238 (403)
++|| ++||+ ++.|+....++.+++++.|||+.+ ..|+. ++.+||++++++++++.++++|+|||+||++|+
T Consensus 219 g~gG-~~GT~a~~~~~f~~D~~~~~~v~~~~a~~LGl~~~-~~~s~-~~~~rd~~~e~~~~la~la~~L~kia~Dirll~ 295 (503)
T 2j91_A 219 GVKG-TTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRA-FIITG-QTYTRKVDIEVLSVLASLGASVHKICTDIRLLA 295 (503)
T ss_dssp CSCC-TTSSCHHHHHHTTTCHHHHHHHHHHHHHHTTCSCB-CSCCS-SSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccc-cccchhhhccccCCchHHHHHHHHHHHHHhCCCCC-CCccc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8887 68998 555554456788999999999953 34554 789999999999999999999999999999999
Q ss_pred cCCCCcceeEEcCC--CCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHH
Q 015619 239 SGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLG 316 (403)
Q Consensus 239 s~~~~e~gev~~~~--~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 316 (403)
| ||||.+|. +++|||||||||||+.+|.++++|++++|+++++++.....|+|+|...|...+..++++..+.
T Consensus 296 s-----~~ei~ep~~~~q~GSSiMP~K~NPv~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~~s~~~~~~l~~~~~~~ 370 (503)
T 2j91_A 296 N-----LKEMEEPFEKQQIGSSAMPYKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTA 370 (503)
T ss_dssp H-----HTSEECCC-----------CCCCCHHHHHHHHHHHHHHHTTHHHHHHHHTCCTTCCGGGHHHHHHHHHHHHHHH
T ss_pred c-----cceeeccccCCCCCCCCCccccCcHHHHHHHHHHHHHHHHHHHHHHHHccCcccccccchHHHHhhHHHHHHHH
Confidence 5 99999994 5899999999999999999999999999999988888888899999999998999999999999
Q ss_pred HHHHHHHHhhhhcCccCHHHHHHHhhhhhhH-HHh-----hCc-cccHHHHHHHHHH-HH------H-c--CCCHHHHHH
Q 015619 317 DASASFEKNCVRGIQANRERISKLLHESLML-VTS-----LNP-KIGYDNAAAVAKK-AH------K-E--GTTLKDAAL 379 (403)
Q Consensus 317 ~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~-~~~-----la~-~lg~~~a~~~~~~-a~------~-~--g~~l~e~~~ 379 (403)
++++.+...|+++|+||++||++++..++++ +|+ +.. .++|++||+++++ +. . . +.+|.|.+.
T Consensus 371 ~~~l~~~~~~l~gL~vn~erm~~~l~~s~~~~ate~v~~~lv~~G~~~~~Ah~~v~~~a~~~g~~V~~~~~~~~l~e~l~ 450 (503)
T 2j91_A 371 DTILNTLQNISEGLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQAASVVKQEGGDNDLIERIQ 450 (503)
T ss_dssp HHHHHHHHHHHHSCEECHHHHHHHHHHHHHHHSHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHH
T ss_pred HHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHh
Confidence 9999999999999999999999999988776 343 444 3788999987733 11 1 1 247877776
Q ss_pred hcCC--CCHHHHhhcCCcccccCCC
Q 015619 380 KLGV--LNSEEFDNLVVPEKMIGPS 402 (403)
Q Consensus 380 ~~~~--l~~~~l~~~ldp~~~vg~~ 402 (403)
.++. +++++++++|||..|+|++
T Consensus 451 ~~~~~~l~~eel~~~ldp~~~~g~a 475 (503)
T 2j91_A 451 VDAYFSPIHSQLDHLLDPSSFTGRA 475 (503)
T ss_dssp HCGGGHHHHTTHHHHTCGGGGSTTH
T ss_pred cCcccCCCHHHHHHhcCHHHhCCcH
Confidence 6655 5688999999999999975
No 24
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=100.00 E-value=3e-68 Score=527.04 Aligned_cols=309 Identities=19% Similarity=0.168 Sum_probs=257.9
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
++| ||++++++|.++|+++. |+++..+.+.+++.+ ++++++. .+.+.+|++. ++|||+|+|||
T Consensus 46 ~~G~i~~~~a~~I~~~~~~i~-------~~~~~~~~~~~~~~~-~~~~~~~-~l~~~~g~~~-------~~~vH~G~Ssn 109 (359)
T 2fel_A 46 EASIFADDEAEAIVSGLSEFA-------ADMSALRHGVAKDGV-VVPELIR-QMRAAVAGQA-------ADKVHFGATSQ 109 (359)
T ss_dssp HTTSSCHHHHHHHHHHHHTCC-------CCHHHHHHHHHHHSS-SHHHHHH-HHHTTSCGGG-------GGGTTTTCCHH
T ss_pred HCCCCCHHHHHHHHHHHHhcc-------ccHHHHHhhccccCC-cHHHHHH-HHHHHcCccc-------cchhcCCCCHh
Confidence 689 99999999999997654 334444444444444 6777654 4566665332 56888999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 015619 81 DTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPR 160 (403)
Q Consensus 81 D~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 160 (403)
||++|+++|++|+.+. .|.+.|.+|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++
T Consensus 110 Dv~~Ta~~l~lr~~l~-~l~~~L~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~ 188 (359)
T 2fel_A 110 DVIDTSLMLRLKMAAE-IIATRLGHLIDTLGDLASRDGHKPLTGYTRMQAAIGITVADRAAGWIAPLERHLLRLETFAQN 188 (359)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCcEeeccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccccCCCCCCCchhHHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 161 MYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 161 ~~~~~lGg~a~Gt~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
++.+|||| |+||+.+ .+++++.+++++|+.|||+.++ +|+++||++++++++++.++++|+|||+||++|+|
T Consensus 189 ~~~~~lGg-avGT~~~-~~~~~~~~~~~~a~~LG~~~~~-----~~~~~RD~~~e~~~~l~~~a~~L~kia~Dirll~s- 260 (359)
T 2fel_A 189 GFALQFGG-AAGTLEK-LGDNAGAVRADLAKRLGLADRP-----QWHNQRDGIAEFANLLSLVTGTLGKFGQDIALMAE- 260 (359)
T ss_dssp CSBCCCCC-TTSSCTT-TGGGHHHHHHHHHHHHTCBCCC-----CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HhhcCCcH-HhccCcc-CcchHHHHHHHHHHHhCcCCCc-----hHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 99999999 8999654 5677888999999999999753 47899999999999999999999999999999996
Q ss_pred CCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHHH
Q 015619 241 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASA 320 (403)
Q Consensus 241 ~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 320 (403)
+| ||+.+|. ++|||||||||||+.+|.++++++++.|+..++. ..+..|+|++...|..+|..+|.+..+.++++
T Consensus 261 --~e-~Ei~~~~-~~GSS~MP~K~NP~~~E~i~~~a~~v~~~~~~~~-~~~~~~~er~~~~~~~e~~~lp~~~~~~~~~L 335 (359)
T 2fel_A 261 --IG-SEIRLSG-GGGSSAMPHKQNPVNAETLVTLARFNAVQISALH-QSLVQEQERSGAGWMLEWLTLPQMVTATGTSL 335 (359)
T ss_dssp --HC-TTEEEC-------------CCHHHHHHHHHHHHHHHHHHHHH-HTTCCCSSBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CC-CeecCCC-CCCCccCCcccCCHHHHHHHHHHHHHHHHHHHHH-HHhhccCCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 58 9999996 5999999999999999999999999999988875 67788999988888878888999888888888
Q ss_pred HHHHhhhhcCccCHHHHHHH
Q 015619 321 SFEKNCVRGIQANRERISKL 340 (403)
Q Consensus 321 ~~~~~~l~~l~v~~erm~~~ 340 (403)
..+..++++|+||++||..+
T Consensus 336 ~~~~~v~~~l~v~~~~m~~~ 355 (359)
T 2fel_A 336 LVAERLAAQIDRLGADESHH 355 (359)
T ss_dssp HHHHHHHHHEEEECC-----
T ss_pred HHHHHHHccCEECHHHhCcc
Confidence 88899999999999999865
No 25
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=100.00 E-value=4.2e-67 Score=535.77 Aligned_cols=378 Identities=18% Similarity=0.216 Sum_probs=285.7
Q ss_pred C-CCHHHHHHHHHHHHHHHccccCCCCc-cccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChhh
Q 015619 4 G-LDPAIGKAIMQAAQEVAEGKLNDHFP-LVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSND 81 (403)
Q Consensus 4 G-i~~~~a~~I~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~nD 81 (403)
| ||++++++|.. +.++.++...+.+. +.... ...+.+| ..+|.++++++|..+++..-..+.|||+|+||||
T Consensus 51 gii~~~~~~~i~~-l~~~~~~~~~~d~~~i~~~e----~~~~hDV-~a~e~~l~e~~g~~~~~~~~~~~~~iH~g~SsnD 124 (465)
T 2qga_B 51 LFFEKVTDHSVEV-LNQIATNITDSDIARVKAIE----EETNHDV-KAVEYFVKEKLKNSKREDLLKIKEYVHYLCTSED 124 (465)
T ss_dssp SSSCCCCHHHHHH-HHHHHHCCCHHHHHHHHHHH----HHHSCHH-HHHHHHHHHHHHTSCCHHHHHHGGGTTTTCCHHH
T ss_pred CCCCHHHHHHHHH-HHHHHHhhccccHHHHHHHh----hccCCCh-HHHHHHHHHHhcccccccchhhhhhccCCCChhh
Confidence 8 99999999875 44343221100110 00000 1123455 4599999999983110000022567888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhhh
Q 015619 82 TFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRM 161 (403)
Q Consensus 82 ~~~Ta~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~ 161 (403)
|++|+++|++|+.+.+.|.+.|..|+++|.++|++|++++||||||+||||||||||||++|+++|.||++||.+++
T Consensus 125 v~~Ta~~L~lr~~l~~~l~~~L~~l~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~--- 201 (465)
T 2qga_B 125 INNVAYATCLKACLNDVVIPCLEKIMLKLKDLAVEYSHVPLLSRTHGQPASSTTFGKEMANFYARIHHHVGVIRRVK--- 201 (465)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHSC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEeeccccCcccccchHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 99999999999999526999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhcCCCcccccCCCCCC----Cchh-HHHHHHHHHH-cCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015619 162 YQLAQGGTAVGTGLNTK----KGFD-VKIASAVAEE-TSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVR 235 (403)
Q Consensus 162 ~~~~lGg~a~Gt~~~~~----~~~~-~~~~~~la~~-LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~ 235 (403)
.+++||||+|| ++.. ++.+ .++.+.+++. |||+.++.+ +++.+||++++++++++.++++|+|||+||+
T Consensus 202 -~~~~~~GAvGT-~~a~~~~~p~~d~~~~~~~~~~~~LGl~~~~~~---~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ 276 (465)
T 2qga_B 202 -VCAKFNGAVGN-FNAHKVASKDTDWVNTIGLFLKKHFNLTYSIYC---TQIQDHDYICELCDGLARANGTLIDLCVDIW 276 (465)
T ss_dssp -CEECCCCTTSS-CHHHHHHCTTCCHHHHHHHHHHHHHCCEECCCC---SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HhccccchhcC-ccccccccCcccHHHHHHHHHHHHhCCCCCCCc---cchhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57777779999 4321 1111 2345566655 999976433 5789999999999999999999999999999
Q ss_pred HhccCCCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHH
Q 015619 236 LLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLL 315 (403)
Q Consensus 236 ~~~s~~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 315 (403)
+|+|. ||.+...|++++|||||||||||+.+|.++++++.+.|....++......+++++...+...+.++..+...
T Consensus 277 ll~s~---~~~~e~~~~~~~GSSiMP~K~NP~~~e~~~g~~~~~~~~~~~~~~~l~~~~~erdl~~s~~~r~l~~~~~~~ 353 (465)
T 2qga_B 277 LYISN---NLLKLKVKEKEVGSSTMPHKVNPIDFENAEGNLHIANAFFKLFSSKLPTSRLQRDLSDSTVLRNIGSSLAYC 353 (465)
T ss_dssp HHHHT---TSEEEC-------CCSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTBCTHHHHHHTTHHHHHHHH
T ss_pred HHhCC---cceeeeCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhhhhHHHHHHHH
Confidence 99974 564444566799999999999999999999999999998777755444567777766555555666777767
Q ss_pred HHHHHHHHHhhhhcCccCHHHHHHHhhhhhhHH-----HhhCccccHHHHHHHHHHHHHcCC-----CHHHHHHhcC-CC
Q 015619 316 GDASASFEKNCVRGIQANRERISKLLHESLMLV-----TSLNPKIGYDNAAAVAKKAHKEGT-----TLKDAALKLG-VL 384 (403)
Q Consensus 316 ~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~-----~~la~~lg~~~a~~~~~~a~~~g~-----~l~e~~~~~~-~l 384 (403)
..++..+ ..++++|+||++||++|+..+++++ +.|.++ ||++||++++++.. +. +|.+.+.+.. .+
T Consensus 354 ~~~l~~~-~~~l~~l~vn~~~m~~~l~~~~~~~ae~v~~~L~~~-G~~~A~~iv~~~~~-~~~~~~~~l~~~~~~~~~~~ 430 (465)
T 2qga_B 354 LIAYKSV-LKGLNKIDIDRRNLEEELNQNWSTLAEPIQIVMKRH-NYVDAYEELKQFTR-GKVIDQKIMQEFIKTKCAFL 430 (465)
T ss_dssp HHHHHHH-HHHHHHEEECHHHHHHHHHTCGGGGHHHHHHHHHHT-TCSCHHHHHHHHHT-TSCCCHHHHHHHHHHHSTTS
T ss_pred HHHHHHH-HHHHccCEECHHHHHHHHHcCCChHHHHHHHHHHHh-ChHHHHHHHHHHHh-hhhhccCCHHHHHHhchhcC
Confidence 6666666 5799999999999999999999875 556665 99999999999875 33 3555555543 47
Q ss_pred CH---HHHhhcCCcccccCCC
Q 015619 385 NS---EEFDNLVVPEKMIGPS 402 (403)
Q Consensus 385 ~~---~~l~~~ldp~~~vg~~ 402 (403)
++ ++|+ +|||..|+|.+
T Consensus 431 ~~~~~~~l~-~ldp~~y~G~a 450 (465)
T 2qga_B 431 PQDVVDQLL-ELTPATYTGYA 450 (465)
T ss_dssp CHHHHHHHH-HCCGGGCCTTH
T ss_pred CcchHHHHH-hcCHHHhCCcH
Confidence 77 8898 99999999975
No 26
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=100.00 E-value=2e-65 Score=522.56 Aligned_cols=371 Identities=18% Similarity=0.180 Sum_probs=285.8
Q ss_pred CHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChhhHHHH
Q 015619 6 DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPT 85 (403)
Q Consensus 6 ~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~nD~~~T 85 (403)
+++++++|.++++++..+ .|..... .....+.+| ..+|.++.+++|. .|+. -..+.|||+|+|||||++|
T Consensus 63 ~~~~~~~i~~~~~~~~~~----d~~~~~~---~e~~~~~Dv-~a~e~~l~e~~g~-~~~~-~~~~~~iH~g~SsnDv~~T 132 (459)
T 3bhg_A 63 DNKARKFLSDLISNFNES----EAEKIKE---FEKQTNHDV-KAVEYYLQDKFQE-NEQL-KSCVAFIHFACTSEDINNL 132 (459)
T ss_dssp CHHHHHHHHHHHHTCCHH----HHHHHHH---HTTTCSSHH-HHHHHHHHHHHTT-STTG-GGGGGGTTTTCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccc----cHHHHHH---HHHhcCCCh-HHHHHHHHHHhcc-cccC-chhhhhhcCCCCHHhHHHH
Confidence 489999999998654211 1110000 001123455 4589999999983 3311 1346788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceecccCCCCCccCchhHHHHHHHHHHHHHHHHHHhhhhhhhhcC
Q 015619 86 VMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLA 165 (403)
Q Consensus 86 a~~l~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~ 165 (403)
+++|++|+.+.+.|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++ .++
T Consensus 133 a~~L~lr~~l~~~l~~~L~~l~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~----~~~ 208 (459)
T 3bhg_A 133 AYALMIKQAIAQVIQPTIAEIMGSITLLGKQHADVAMLSRTHGQPATPTTMGKELVNFVARLKRPQQQLAEVL----IPA 208 (459)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC----CEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEeeccccCccceechHHHHHHHHHHHHHHHHHHHHHHH----Hhh
Confidence 9999999999525999999999999999999999999999999999999999999999999999999999987 466
Q ss_pred CCcccccCCCCCCC-chh----HHHHHHHHHHcCCCCCCCCchhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015619 166 QGGTAVGTGLNTKK-GFD----VKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSG 240 (403)
Q Consensus 166 lGg~a~Gt~~~~~~-~~~----~~~~~~la~~LG~~~~~~~n~~da~~~rd~~~~~~~~l~~~~~~l~kia~Dl~~~~s~ 240 (403)
+||||+|| ++... .|+ +++.+++++.|||+..+.++ ++.+||++++++++++.++++|+|||+||++|+|.
T Consensus 209 ~~~GAvGT-~~a~~~~~~~~~~~~~~~~~~~~LGl~~~~~~~---~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~ 284 (459)
T 3bhg_A 209 KFNGAVGN-YNAHVAAYPEVDWRKHCANFVTSLGLSFNAYTT---QIEPHDGIAEVSQIMVRINNILLDYTQDIWSYISL 284 (459)
T ss_dssp CCCCSSSS-CHHHHHHCTTSCHHHHHHHHHHHTTCEECSSCS---SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccc-ccccccccCcccHHHHHHHHHHHhCCCCCcccc---chhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 66679999 44221 122 45778899899998543332 57899999999999999999999999999999974
Q ss_pred CCCcceeEEcCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHhhccCccccccchhhHHHHhHHHHHHHHHHHHH
Q 015619 241 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASA 320 (403)
Q Consensus 241 ~~~e~gev~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 320 (403)
||.+...|++++|||||||||||+.+|.++++++.+.|....++......+++++...+...+.++..+.....++.
T Consensus 285 ---~~~~e~~~~~~~GSSiMP~K~NP~~~e~~~g~~~l~~~~~~~~~~~l~~~~~~rdl~~s~~~r~l~~~~~~~~~~l~ 361 (459)
T 3bhg_A 285 ---GYFKQKTIAEEVGSSTMPHKVNPIDFENAEGNLGLSNALFIHFANKLTQSRMQRDLSDSTVLRNLGVAFSYSLIAYH 361 (459)
T ss_dssp ---TSEEECC------CCSSCCCCCTHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCTHHHHHHTTHHHHHHHHHHHHH
T ss_pred ---cceehccCCCCCCCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhhhHHHHHHHHHHHHH
Confidence 56443345569999999999999999999999999999877665444345677776555555566677777766666
Q ss_pred HHHHhhhhcCccCHHHHHHHhhhhhhHHH-----hhCccccHHHHHHHHHHHHHcCC-----CHHHHHHhcCCCC---HH
Q 015619 321 SFEKNCVRGIQANRERISKLLHESLMLVT-----SLNPKIGYDNAAAVAKKAHKEGT-----TLKDAALKLGVLN---SE 387 (403)
Q Consensus 321 ~~~~~~l~~l~v~~erm~~~l~~~~~~~~-----~la~~lg~~~a~~~~~~a~~~g~-----~l~e~~~~~~~l~---~~ 387 (403)
.+ ..++++|+||++||++|+..++++++ .|.++ ||++||++++++.. |. +|++.+.+.+ ++ .+
T Consensus 362 ~~-~~~l~gl~vn~e~m~~~l~~~~~~~te~~~~~L~~~-G~~~A~~iv~~~~~-~~~~~~~~l~~~l~~l~-~~~~~~~ 437 (459)
T 3bhg_A 362 SV-AKGNDKLQINKSALQKDLSENWEVLAEAIQTVMRRY-NEPNAYEQLKELTR-GQMIDAENLKKFIKTLS-IPEEAKA 437 (459)
T ss_dssp HH-HHHHTTEEECHHHHHHHHHTCGGGGHHHHHHHHHHT-TCTTHHHHHHHHHT-TSCCCHHHHHHHHHTSC-SCHHHHH
T ss_pred HH-HHHHCcCEECHHHHHHHHHcCCchHHHHHHHHHHHh-ChHHHHHHHHHHHh-hcccccccHHHHHHhcC-CCchhHH
Confidence 66 57999999999999999999999874 45554 99999999999887 44 4677665522 22 46
Q ss_pred HHhhcCCcccccCCC
Q 015619 388 EFDNLVVPEKMIGPS 402 (403)
Q Consensus 388 ~l~~~ldp~~~vg~~ 402 (403)
+|+ ++||..|+|.+
T Consensus 438 ~l~-~~dp~~y~g~a 451 (459)
T 3bhg_A 438 ELM-KLTPETYTGLA 451 (459)
T ss_dssp HHH-HCCGGGCCTTH
T ss_pred HHH-hCCHHHHhCcH
Confidence 787 99999999975
No 27
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=28.80 E-value=1.9e+02 Score=27.66 Aligned_cols=80 Identities=13% Similarity=0.138 Sum_probs=49.5
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccccCCCccccccchhHHHHHHHHHHhCCcCCCcccccccccCCCCChh
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSN 80 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~~~h~~~~vh~g~S~n 80 (403)
+.| |+++.+..|...+.+|...... -..+.. ..---.|+|.+..... .+.+..|.......+-.||+|..|.-+.
T Consensus 39 ~~~~l~~~~~~~l~~~~~~il~~ep~-ll~~~~-pi~ViGDIHG~~~dL~--~ll~~~g~~~~~~~vfLGD~VDRG~~s~ 114 (357)
T 3ll8_A 39 KEGRLEESVALRIITEGASILRQEKN-LLDIDA-PVTVCGDIHGQFFDLM--KLFEVGGSPANTRYLFLGDYVDRGYFSI 114 (357)
T ss_dssp TTCCBCHHHHHHHHHHHHHHHHTSCS-EEEECS-SEEEECCCTTCHHHHH--HHHHHHCCTTTCCEEECSCCSSSSTTHH
T ss_pred hCCCCCHHHHHHHHHHHHHHHHhCCC-eEEecc-cceeeccCCCCHHHHH--HHHHhcCCCCCcEEEECCCccCCCcChH
Confidence 467 9999999999998888764221 111110 0112357898877654 3455666432222377899999998876
Q ss_pred hHHHH
Q 015619 81 DTFPT 85 (403)
Q Consensus 81 D~~~T 85 (403)
.++..
T Consensus 115 Evl~l 119 (357)
T 3ll8_A 115 ECVLY 119 (357)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 28
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.02 E-value=2.3e+02 Score=22.52 Aligned_cols=29 Identities=14% Similarity=0.031 Sum_probs=23.7
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHhhhhHHH
Q 015619 256 GSSIMPGKVNPTQCEALTMVCAQVIGNHVAI 286 (403)
Q Consensus 256 GSS~MPqK~NP~~~E~i~~~a~~v~g~~~~~ 286 (403)
||+ |++-.|..++.|+....+.+-+....
T Consensus 1 ~~~--~~~~e~~~l~~ik~~h~~AF~~Is~A 29 (116)
T 2dl1_A 1 GSS--GSSGEPAEIKIIREAYKKAFLFVNKG 29 (116)
T ss_dssp CCC--CCTTSCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 667 99999999999999888777665444
No 29
>1fgl_B HIV-1 GAG protein; cyclophilin, binding protein for cyclosporin A, AIDS, isomer peptide complex; 1.80A {Human immunodeficiency virus type 1}
Probab=25.76 E-value=22 Score=20.59 Aligned_cols=14 Identities=43% Similarity=0.605 Sum_probs=11.3
Q ss_pred ccCCCCCccCchhH
Q 015619 125 RTHTQDATPLTLGQ 138 (403)
Q Consensus 125 rTh~Q~A~P~T~G~ 138 (403)
|+|-|+|.|+.-|+
T Consensus 2 r~Hp~~agp~p~gq 15 (26)
T 1fgl_B 2 RXHPVHAGPIAPGQ 15 (26)
T ss_pred CcCcccCCCCCCCC
Confidence 78999999987664
No 30
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=23.95 E-value=2.7e+02 Score=26.04 Aligned_cols=83 Identities=13% Similarity=0.117 Sum_probs=50.0
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccc---cCCCccccccchhHHHHHHHHHHhCCcCCCc-ccccccccCCC
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVW---QTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRS 76 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~-~~h~~~~vh~g 76 (403)
+.+ |+++.+..|...+.++..... .-..+..- ..-.-.|+|.+...+. .+.+..|...... .+-.||+|+.|
T Consensus 25 ~~~~l~~~~~~~l~~~~~~il~~ep-~l~~l~~p~~~ri~viGDIHG~~~~L~--~ll~~~g~~~~~~~~vflGD~VDRG 101 (315)
T 3h63_A 25 DQKKLHRKCAYQILVQVKEVLSKLS-TLVETTLKETEKITVCGDTHGQFYDLL--NIFELNGLPSETNPYIFNGDFVDRG 101 (315)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHTSC-SEEEECCCTTCEEEEECCCTTCHHHHH--HHHHHHCCCBTTBCEEEESCCSSSS
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhCC-CeEEEecCCCceEEEEecCCCCHHHHH--HHHHHhCCCCCCCEEEEeCCccCCC
Confidence 356 999999999998888876422 11111100 0112357899877754 3456666432221 36779999999
Q ss_pred CChhhHHHHHH
Q 015619 77 QSSNDTFPTVM 87 (403)
Q Consensus 77 ~S~nD~~~Ta~ 87 (403)
.-+..++...+
T Consensus 102 ~~s~evl~lL~ 112 (315)
T 3h63_A 102 SFSVEVILTLF 112 (315)
T ss_dssp TTHHHHHHHHH
T ss_pred cChHHHHHHHH
Confidence 88866654433
No 31
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=20.03 E-value=3.3e+02 Score=25.62 Aligned_cols=82 Identities=13% Similarity=0.057 Sum_probs=50.1
Q ss_pred CCC-CCHHHHHHHHHHHHHHHccccCCCCccccc-----cCCCccccccchhHHHHHHHHHHhCCcCCCc-ccccccccC
Q 015619 2 EYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVW-----QTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVN 74 (403)
Q Consensus 2 ~~G-i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~v~~vie~~l~~~~g~~~g~~-~~h~~~~vh 74 (403)
+.+ |+++....|...+.++..... .-+.++.- ..-.-.|+|.+...+. .+.+.+|...... .+-.||+|+
T Consensus 27 ~~~~l~~~~~~~l~~~~~~il~~ep-~~~~l~~p~~~~~ri~viGDIHG~~~~L~--~ll~~~g~~~~~~~~vflGD~VD 103 (335)
T 3icf_A 27 KGKYLPKKYVAAIISHADTLFRQEP-SMVELENNSTPDVKISVCGDTHGQFYDVL--NLFRKFGKVGPKHTYLFNGDFVD 103 (335)
T ss_dssp GTCCCCHHHHHHHHHHHHHHHHTSC-SEEEECCSSSTTCEEEEECCCTTCHHHHH--HHHHHHCCCBTTEEEEECSCCSS
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhCC-CeEEecCCcccCceEEEEecCCCCHHHHH--HHHHHcCCCCCCcEEEEeCCccC
Confidence 356 999999999998888876322 11111110 0011347899877764 4556667432211 367899999
Q ss_pred CCCChhhHHHHH
Q 015619 75 RSQSSNDTFPTV 86 (403)
Q Consensus 75 ~g~S~nD~~~Ta 86 (403)
.|.-+..++...
T Consensus 104 RG~~s~evl~lL 115 (335)
T 3icf_A 104 RGSWSCEVALLF 115 (335)
T ss_dssp SSTTHHHHHHHH
T ss_pred CCcChHHHHHHH
Confidence 998876655433
Done!