BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015630
(403 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QMM|A Chain A, Structure Of 6b, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3QMM|B Chain B, Structure Of 6b, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 32/116 (27%)
Query: 24 DPVLLVSGMGGSVLHAKRKKSGLETRVWVRILLADLEFKRKVWSLYNPKTEMLVKCGYKK 83
+PV++V G+GGS + + KS L ++ W R L ++F K + YN
Sbjct: 4 NPVVMVHGIGGSSSNFEGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN------------N 51
Query: 84 GTTLFGYGYDFRQSNRIDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVMCFM 139
G L S + K+++ +G +KV ++ HSMGG + ++
Sbjct: 52 GPVL---------SRFVQKVLD-----------ETGAKKVDIVAHSMGGANTLYYI 87
>pdb|1YS1|X Chain X, Burkholderia Cepacia Lipase Complexed With Hexylphosphonic
Acid (R)-2-Methyl-3-Phenylpropyl Ester
pdb|1YS2|X Chain X, Burkholderia Cepacia Lipase Complexed With Hexylphosphonic
Acid (s) 2-methyl-3-phenylpropyl Ester
Length = 320
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 82 KKGTTLF-----GYGYDFRQSNRIDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVM 136
++G T++ G+ D + R ++L+ +K T A+G KV L+ HS GGL
Sbjct: 39 QRGATVYVANLSGFQSDDGPNGRGEQLLAYVK----TVLAATGATKVNLVGHSQGGLTSR 94
Query: 137 CFMSLHKDVFSKFVNKWITIASPFQGA 163
++ D+ + TI +P +G+
Sbjct: 95 YVAAVAPDLVASVT----TIGTPHRGS 117
>pdb|1OIL|A Chain A, Structure Of Lipase
pdb|1OIL|B Chain B, Structure Of Lipase
pdb|4LIP|D Chain D, Pseudomonas Lipase Complexed With Rc-(rp, Sp)-
Dibutylcarbamoylglycero-3-o-butylphosphonate
pdb|4LIP|E Chain E, Pseudomonas Lipase Complexed With Rc-(rp, Sp)-
Dibutylcarbamoylglycero-3-o-butylphosphonate
pdb|1HQD|A Chain A, Pseudomonas Cepacia Lipase Complexed With Transition State
Analogue Of 1-Phenoxy-2-Acetoxy Butane
pdb|2LIP|A Chain A, Pseudomonas Lipase Open Conformation
pdb|3LIP|A Chain A, Open Conformation Of Pseudomonas Cepacia Lipase
pdb|5LIP|A Chain A, Pseudomonas Lipase Complexed With Rc-(Rp, Sp)-1,2-
Dioctylcarbamoylglycero-3-O-Octylphosphonate
pdb|2NW6|A Chain A, Burkholderia Cepacia Lipase Complexed With S-Inhibitor
Length = 320
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 82 KKGTTLF-----GYGYDFRQSNRIDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVM 136
++G T++ G+ D + R ++L+ +K T A+G KV L+ HS GGL
Sbjct: 39 QRGATVYVANLSGFQSDDGPNGRGEQLLAYVK----TVLAATGATKVNLVGHSQGGLTSR 94
Query: 137 CFMSLHKDVFSKFVNKWITIASPFQGA 163
++ D+ + TI +P +G+
Sbjct: 95 YVAAVAPDLVASVT----TIGTPHRGS 117
>pdb|3D2C|A Chain A, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|B Chain B, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|C Chain C, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|D Chain D, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|E Chain E, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|F Chain F, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|G Chain G, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|H Chain H, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|I Chain I, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|J Chain J, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|K Chain K, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|L Chain L, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 32/116 (27%)
Query: 24 DPVLLVSGMGGSVLHAKRKKSGLETRVWVRILLADLEFKRKVWSLYNPKTEMLVKCGYKK 83
+PV++V G+GGS + + KS L ++ W R L ++F K + YN
Sbjct: 4 NPVVMVHGIGGSSSNFEGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN------------N 51
Query: 84 GTTLFGYGYDFRQSNRIDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVMCFM 139
G L S + K+++ +G +KV ++ HSMGG + ++
Sbjct: 52 GPVL---------SRFVQKVLD-----------ETGAKKVDIVAHSMGGANTLYYI 87
>pdb|3ICV|A Chain A, Structural Consequences Of A Circular Permutation On
Lipase B From Candida Antartica
pdb|3ICW|A Chain A, Structure Of A Circular Permutation On Lipase B From
Candida Antartica With Bound Suicide Inhibitor
Length = 316
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 111 LETAYKASGNRKVTLITHSMGGLLVMCFMSLHKDVFSKFVNKWITIASPFQG 162
+ T Y SGN K+ ++T S GGL+ ++ + SK V++ + A ++G
Sbjct: 121 ITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSK-VDRLMAFAPDYKG 171
>pdb|1T2N|A Chain A, Structure Of A Thermostable Triple Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 32/116 (27%)
Query: 24 DPVLLVSGMGGSVLHAKRKKSGLETRVWVRILLADLEFKRKVWSLYNPKTEMLVKCGYKK 83
+PV++V G+GG+ + KS L ++ W R L ++F K + YN
Sbjct: 4 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN------------N 51
Query: 84 GTTLFGYGYDFRQSNRIDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVMCFM 139
G L S + K+++ +G +KV ++ HSMGG + ++
Sbjct: 52 GPVL---------SRFVQKVLD-----------ETGAKKVDIVAHSMGGANTLYYI 87
>pdb|3D2A|A Chain A, Structure Of 1-17a4, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 32/116 (27%)
Query: 24 DPVLLVSGMGGSVLHAKRKKSGLETRVWVRILLADLEFKRKVWSLYNPKTEMLVKCGYKK 83
+PV++V G+GG+ + KS L ++ W R L ++F K + YN
Sbjct: 4 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN------------N 51
Query: 84 GTTLFGYGYDFRQSNRIDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVMCFM 139
G L S + K+++ +G +KV ++ HSMGG + ++
Sbjct: 52 GPVL---------SRFVQKVLD-----------ETGAKKVDIVAHSMGGANTLYYI 87
>pdb|1T4M|A Chain A, Structure Of A Thermostable Double Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 32/116 (27%)
Query: 24 DPVLLVSGMGGSVLHAKRKKSGLETRVWVRILLADLEFKRKVWSLYNPKTEMLVKCGYKK 83
+PV++V G+GG+ + KS L ++ W R L ++F K + YN
Sbjct: 4 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN------------N 51
Query: 84 GTTLFGYGYDFRQSNRIDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVMCFM 139
G L S + K+++ +G +KV ++ HSMGG + ++
Sbjct: 52 GPVL---------SRFVQKVLD-----------ETGAKKVDIVAHSMGGANTLYYI 87
>pdb|1I6W|A Chain A, The Crystal Structure Of Bacillus Subtilis Lipase: A
Minimal AlphaBETA HYDROLASE ENZYME
pdb|1I6W|B Chain B, The Crystal Structure Of Bacillus Subtilis Lipase: A
Minimal AlphaBETA HYDROLASE ENZYME
pdb|1ISP|A Chain A, Crystal Structure Of Bacillus Subtilis Lipase At 1.3a
Resolution
pdb|1R4Z|A Chain A, Bacillus Subtilis Lipase A With Covalently Bound Rc-Ipg-
Phosphonate-Inhibitor
pdb|1R4Z|B Chain B, Bacillus Subtilis Lipase A With Covalently Bound Rc-Ipg-
Phosphonate-Inhibitor
pdb|1R50|A Chain A, Bacillus Subtilis Lipase A With Covalently Bound Sc-Ipg-
Phosphonate-Inhibitor
pdb|1R50|B Chain B, Bacillus Subtilis Lipase A With Covalently Bound Sc-Ipg-
Phosphonate-Inhibitor
Length = 181
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 32/116 (27%)
Query: 24 DPVLLVSGMGGSVLHAKRKKSGLETRVWVRILLADLEFKRKVWSLYNPKTEMLVKCGYKK 83
+PV++V G+GG+ + KS L ++ W R L ++F K + YN
Sbjct: 4 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN------------N 51
Query: 84 GTTLFGYGYDFRQSNRIDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVMCFM 139
G L S + K+++ +G +KV ++ HSMGG + ++
Sbjct: 52 GPVL---------SRFVQKVLD-----------ETGAKKVDIVAHSMGGANTLYYI 87
>pdb|2QXT|A Chain A, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 4.5
pdb|2QXT|B Chain B, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 4.5
pdb|2QXU|A Chain A, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|B Chain B, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|C Chain C, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|D Chain D, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|E Chain E, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|F Chain F, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|G Chain G, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|H Chain H, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
Length = 179
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 32/116 (27%)
Query: 24 DPVLLVSGMGGSVLHAKRKKSGLETRVWVRILLADLEFKRKVWSLYNPKTEMLVKCGYKK 83
+PV++V G+GG+ + KS L ++ W R L ++F K + YN
Sbjct: 2 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN------------N 49
Query: 84 GTTLFGYGYDFRQSNRIDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVMCFM 139
G L S + K+++ +G +KV ++ HSMGG + ++
Sbjct: 50 GPVL---------SRFVQKVLD-----------ETGAKKVDIVAHSMGGANTLYYI 85
>pdb|3D2B|A Chain A, Structure Of 2d9, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2B|B Chain B, Structure Of 2d9, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 32/116 (27%)
Query: 24 DPVLLVSGMGGSVLHAKRKKSGLETRVWVRILLADLEFKRKVWSLYNPKTEMLVKCGYKK 83
+PV++V G+GG+ + KS L ++ W R L ++F K + YN
Sbjct: 4 NPVVMVHGIGGASSNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN------------N 51
Query: 84 GTTLFGYGYDFRQSNRIDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVMCFM 139
G L S + K+++ +G +KV ++ HSMGG + ++
Sbjct: 52 GPVL---------SRFVQKVLD-----------ETGAKKVDIVAHSMGGANTLYYI 87
>pdb|1TCB|A Chain A, The Sequence, Crystal Structure Determination And
Refinement Of Two Crystal Forms Of Lipase B From Candida
Antarctica
pdb|1TCB|B Chain B, The Sequence, Crystal Structure Determination And
Refinement Of Two Crystal Forms Of Lipase B From Candida
Antarctica
pdb|1TCC|A Chain A, The Sequence, Crystal Structure Determination And
Refinement Of Two Crystal Forms Of Lipase B From Candida
Antarctica
pdb|1TCC|B Chain B, The Sequence, Crystal Structure Determination And
Refinement Of Two Crystal Forms Of Lipase B From Candida
Antarctica
pdb|1LBS|A Chain A, Lipase (E.C.3.1.1.3) (Triacylglycerol Hydrolase)
pdb|1LBS|B Chain B, Lipase (E.C.3.1.1.3) (Triacylglycerol Hydrolase)
pdb|1LBS|C Chain C, Lipase (E.C.3.1.1.3) (Triacylglycerol Hydrolase)
pdb|1LBS|D Chain D, Lipase (E.C.3.1.1.3) (Triacylglycerol Hydrolase)
pdb|1LBS|E Chain E, Lipase (E.C.3.1.1.3) (Triacylglycerol Hydrolase)
pdb|1LBS|F Chain F, Lipase (E.C.3.1.1.3) (Triacylglycerol Hydrolase)
pdb|1LBT|A Chain A, Lipase (e.c.3.1.1.3) (triacylglycerol Hydrolase)
pdb|1LBT|B Chain B, Lipase (e.c.3.1.1.3) (triacylglycerol Hydrolase)
pdb|1TCA|A Chain A, The Sequence, Crystal Structure Determination And
Refinement Of Two Crystal Forms Of Lipase B From Candida
Antarctica
Length = 317
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 YKASGNRKVTLITHSMGGLLVMCFMSLHKDVFSKFVNKWITIASPFQG 162
Y SGN K+ ++T S GGL+ ++ + SK V++ + A ++G
Sbjct: 91 YAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSK-VDRLMAFAPDYKG 137
>pdb|1X0U|A Chain A, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|B Chain B, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|C Chain C, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|D Chain D, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|E Chain E, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|F Chain F, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
Length = 522
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 100 IDKLMEGLKVKLETAYKASGNRKVTLITHSMGGLLVMCFMSLHKDVFSKFVNKWITIASP 159
++KL+E L+ E AYK G+ ++ HS G L ++L D KF N+ +T A+
Sbjct: 8 VEKLIEELRQLKEKAYKGGGDERIQF-QHSKGKLTARERLALLFD-DGKF-NEIMTFATT 64
Query: 160 FQGAPGC-----INDSLLTGLQFVEGIASFFFVSRWTM 192
G D ++TG V+G F + +T+
Sbjct: 65 RATEFGLDKQRFYGDGVVTGWGKVDGRTVFAYAQDFTV 102
>pdb|1PX8|A Chain A, Crystal Structure Of Beta-D-Xylosidase From
Thermoanaerobacterium Saccharolyticum, A Family 39
Glycoside Hydrolase
pdb|1PX8|B Chain B, Crystal Structure Of Beta-D-Xylosidase From
Thermoanaerobacterium Saccharolyticum, A Family 39
Glycoside Hydrolase
pdb|1UHV|A Chain A, Crystal Structure Of Beta-D-Xylosidase From
Thermoanaerobacterium Saccharolyticum, A Family 39
Glycoside Hydrolase
pdb|1UHV|B Chain B, Crystal Structure Of Beta-D-Xylosidase From
Thermoanaerobacterium Saccharolyticum, A Family 39
Glycoside Hydrolase
pdb|1UHV|C Chain C, Crystal Structure Of Beta-D-Xylosidase From
Thermoanaerobacterium Saccharolyticum, A Family 39
Glycoside Hydrolase
pdb|1UHV|D Chain D, Crystal Structure Of Beta-D-Xylosidase From
Thermoanaerobacterium Saccharolyticum, A Family 39
Glycoside Hydrolase
Length = 500
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 7/39 (17%)
Query: 278 TRQIINNAQLPNGVSYYNIYGTSY-------DTPFDVSY 309
R+II N+ PN + Y TSY DTPF+ +Y
Sbjct: 259 VREIIKNSHFPNLPFHITEYNTSYSPQNPVHDTPFNAAY 297
>pdb|2WAF|A Chain A, Penicillin-Binding Protein 2b (Pbp-2b) From Streptococcus
Pneumoniae (Strain R6)
Length = 682
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 19/143 (13%)
Query: 235 LETYGPVESISLFKEALRNNELDYNGNSIALPFNFAILDWAAGTRQIINNAQLPNGVSYY 294
L+ YG +ES+ +E + GN+I L + A D + N++L NG + Y
Sbjct: 287 LDKYGNMESVDTIEEGSK-------GNNIKLTIDLAFQDSVDALLKSYFNSELENGGAKY 339
Query: 295 NIYGTSYDTPFDVSYGSETSPIEDLSEICHTMPKYSFV-DGDGT-----VPAESAKADGF 348
+ + + V+ +T + +S I H + D GT VP KA
Sbjct: 340 S------EGVYAVALNPKTGAVLSMSGIKHDLKTGELTPDSLGTVTNVFVPGSVVKAATI 393
Query: 349 PAVERVGVPAEHRELLRDKTVFE 371
+ GV + ++ L VF+
Sbjct: 394 SSGWENGVLSGNQTLTDQSIVFQ 416
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,220,178
Number of Sequences: 62578
Number of extensions: 564554
Number of successful extensions: 1135
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1117
Number of HSP's gapped (non-prelim): 32
length of query: 403
length of database: 14,973,337
effective HSP length: 101
effective length of query: 302
effective length of database: 8,652,959
effective search space: 2613193618
effective search space used: 2613193618
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)