Citrus Sinensis ID: 015633

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400---
MGHFSSMFYGLARSFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK
cccccccccccccccEEEcccccccccccccHHHHHHHHHccccccccccEEEEcccccEEEEEEcccccccccccHHHcccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEccccEEEEEEEcccccEEEEEcccccccccHHHHHHHHHcccEEEEEccccccEEEEccccccccHHHHHccccccccccccccccEEEEEEccccccEEEEEccccccccccHHHHHHHHHHHHHHHHcccHHHHcccccHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccc
ccccHHHHHHHHHEEEEccccccccccccccHHHHHHHHccccccccccccEEccccccEEEEEEccccccccccEEEEEccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEcccccEEEEEcccccEEEEEEEEcccccccHHHHHHHHHcccEEEEcccccccEEEEcccccccHHHHHHHHccHHHHHccEEEcccEEEEEEccccEEEEEEcccccEccccHHHHHHHHHHHHHcccccccccccccccEEEEccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccccccc
MGHFSSMFYGLARSFsirkgknsescagRGAAEAMAKEAKRNEMILRSSgfvnvdssnNFAAVFSkrgekgvnqDCAIVWEEfgcqadmmfcgifdghgpwghFVAKKVresmpssllCNWQETLAEasllpdidldsdkkthrfniwkhSYVKTCAAVDQELEQHRqidsfysgttALTIVRQGEFIMVANVGDSRAVLattsedgslvpvqltvdfkpnlpyEAERIIQckgrvfcledepgvhrvwlpneecpglamsrafgdycvkdyglisvpevtqrhitsrDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRkrkgiamdDISAIClffhssplsqqvhavatpk
MGHFSSMFYGLARSfsirkgknsescAGRGAAEAMAKEAKRNEMILRSsgfvnvdsSNNFAAVfskrgekgvNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLAttsedgslvpvqLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQivsstpnraksakRLVECAVHAWKRKRKGIAMDDISAICLFFhssplsqqvhavatpk
MGHFSSMFYGLARSFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK
*******FYGL**************************************GFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSS******SAKRLVECAVHAWKRKRKGIAMDDISAICLFFHS**************
*********************************************************NNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLA*************KKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVSIMHYYDITIIFKLFLFVK*************LQVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFF****************
MGHFSSMFYGLARSFSIR*******************EAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSS**********LVECAVHAWKRKRKGIAMDDISAICLFFHSSPLS**********
*****S*FYGLARSFSIRK***************************RSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQET*****************THRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKE********LILQVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHS**************
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MGHFSSMFYGLARSFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query403 2.2.26 [Sep-21-2011]
Q0WRB2373 Probable protein phosphat yes no 0.870 0.941 0.672 1e-155
Q9M9W9358 Probable protein phosphat no no 0.863 0.972 0.669 1e-152
Q6L482353 Probable protein phosphat yes no 0.856 0.977 0.532 1e-113
Q9LRZ4351 Probable protein phosphat no no 0.841 0.965 0.528 1e-110
Q9M8R7492 Probable protein phosphat no no 0.841 0.689 0.398 5e-84
Q8RXZ4504 Probable protein phosphat no no 0.786 0.628 0.404 1e-83
Q9FG61448 Probable protein phosphat no no 0.776 0.698 0.399 7e-82
Q9SA22491 Probable protein phosphat no no 0.774 0.635 0.405 4e-80
Q6ZKL8 531 Probable protein phosphat no no 0.766 0.581 0.430 1e-78
Q8H4S6427 Probable protein phosphat no no 0.746 0.704 0.409 8e-78
>sp|Q0WRB2|P2C73_ARATH Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana GN=PPC6-7 PE=2 SV=1 Back     alignment and function desciption
 Score =  548 bits (1411), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 261/388 (67%), Positives = 309/388 (79%), Gaps = 37/388 (9%)

Query: 1   MGHFSSMFYGLARSFSIRKGKNSE-SCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNN 59
           MGHFSSMF GLARSFSI+K KN+  +C  + AA+ MA EAK+ E+IL+SSG+VNV  SNN
Sbjct: 1   MGHFSSMFNGLARSFSIKKVKNNNGNCDAKEAADEMASEAKKKELILKSSGYVNVQGSNN 60

Query: 60  FAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLC 119
            A++FSKRGEKGVNQDCA+VWE FGCQ DM+FCGIFDGHGPWGH+VAK+VR SMP SLLC
Sbjct: 61  LASLFSKRGEKGVNQDCALVWEGFGCQEDMIFCGIFDGHGPWGHYVAKQVRNSMPLSLLC 120

Query: 120 NWQETLAEASLLPDIDLD-SDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTA 178
           NWQ+ LA+A+L P++DL+ S+KK  RF+IWK SY+KTCA VDQELE HR+IDS+YSGTTA
Sbjct: 121 NWQKILAQATLEPELDLEGSNKKISRFDIWKQSYLKTCATVDQELEHHRKIDSYYSGTTA 180

Query: 179 LTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFC 238
           LTIVRQGE I VANVGDSRAVLA  S++GSLV VQLT+DFKPNLP E ERII CKGRVFC
Sbjct: 181 LTIVRQGEVIYVANVGDSRAVLAMESDEGSLVAVQLTLDFKPNLPQEKERIIGCKGRVFC 240

Query: 239 LEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDG 298
           L+DEPGVHRVW P+ E PGLAMSRAFGDYC+K+YGL+SVPEVTQRHI+++D F++LA+DG
Sbjct: 241 LDDEPGVHRVWQPDAETPGLAMSRAFGDYCIKEYGLVSVPEVTQRHISTKDHFIILASDG 300

Query: 299 VSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSSTPNRAKSAK 358
                                              +WDVISNQEAI+IVSST  R K+AK
Sbjct: 301 -----------------------------------IWDVISNQEAIEIVSSTAERPKAAK 325

Query: 359 RLVECAVHAWKRKRKGIAMDDISAICLF 386
           RLVE AV AWK+KR+G +MDD+S +CLF
Sbjct: 326 RLVEQAVRAWKKKRRGYSMDDMSVVCLF 353

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9M9W9|P2C34_ARATH Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana GN=At3g05640 PE=2 SV=1 Back     alignment and function description
>sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1 Back     alignment and function description
>sp|Q9LRZ4|P2C41_ARATH Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1 Back     alignment and function description
>sp|Q8RXZ4|P2C18_ARATH Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG61|P2C74_ARATH Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1 Back     alignment and function description
>sp|Q9SA22|P2C06_ARATH Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZKL8|P2C66_ORYSJ Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1 Back     alignment and function description
>sp|Q8H4S6|P2C64_ORYSJ Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query403
224123012368 predicted protein [Populus trichocarpa] 0.913 1.0 0.766 1e-180
224123886368 predicted protein [Populus trichocarpa] 0.913 1.0 0.761 1e-178
225450755366 PREDICTED: probable protein phosphatase 0.903 0.994 0.736 1e-173
255542816359 protein phosphatase 2c, putative [Ricinu 0.890 1.0 0.738 1e-169
363807333368 uncharacterized protein LOC100794039 [Gl 0.895 0.980 0.718 1e-168
356572950369 PREDICTED: probable protein phosphatase 0.913 0.997 0.727 1e-167
357511799377 hypothetical protein MTR_7g112490 [Medic 0.913 0.976 0.691 1e-162
356576817367 PREDICTED: probable protein phosphatase 0.905 0.994 0.706 1e-161
356505797371 PREDICTED: probable protein phosphatase 0.913 0.991 0.731 1e-161
449454051367 PREDICTED: probable protein phosphatase 0.900 0.989 0.683 1e-161
>gi|224123012|ref|XP_002318972.1| predicted protein [Populus trichocarpa] gi|222857348|gb|EEE94895.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 309/403 (76%), Positives = 339/403 (84%), Gaps = 35/403 (8%)

Query: 1   MGHFSSMFYGLARSFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNF 60
           MGHFSSMF GLA+SF+IRK K++ +  GR AAEAMAK+AK+NEMILRSSG VNVD S NF
Sbjct: 1   MGHFSSMFNGLAKSFTIRKVKSNGNGDGREAAEAMAKDAKKNEMILRSSGCVNVDGSKNF 60

Query: 61  AAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCN 120
           A+VFS+RGEKGVNQDC IVWEEFGCQADM FCGIFDGHG WGHFVAKKVRESM +SLLCN
Sbjct: 61  ASVFSRRGEKGVNQDCCIVWEEFGCQADMTFCGIFDGHGQWGHFVAKKVRESMATSLLCN 120

Query: 121 WQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALT 180
           WQETLA+ SL PDIDL+SDKK  RFN+WKHSY+KTCAAVDQELEQHR+IDSFYSGTTALT
Sbjct: 121 WQETLAQCSLDPDIDLESDKKHQRFNMWKHSYLKTCAAVDQELEQHRKIDSFYSGTTALT 180

Query: 181 IVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLE 240
           IVRQGE I VANVGDSRAVLATT++DGSLV VQLTVDFKPNLP E ERI+QC+GRVFCL+
Sbjct: 181 IVRQGEHIFVANVGDSRAVLATTADDGSLVQVQLTVDFKPNLPQETERILQCRGRVFCLD 240

Query: 241 DEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVS 300
           DEPGVHRVW P+ E PGLAMSRAFGDYCVK++GLISVPEVTQRH+TS DQFV+LATDG  
Sbjct: 241 DEPGVHRVWQPDAESPGLAMSRAFGDYCVKNFGLISVPEVTQRHLTSEDQFVILATDG-- 298

Query: 301 IMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSSTPNRAKSAKRL 360
                                            VWDVISNQEA+QIVSSTP+RAK+AKRL
Sbjct: 299 ---------------------------------VWDVISNQEAVQIVSSTPDRAKAAKRL 325

Query: 361 VECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK 403
           V+ AVHAWKRKRKGIAMDDISAICLF HSSP SQQVHAV+TPK
Sbjct: 326 VQSAVHAWKRKRKGIAMDDISAICLFVHSSPQSQQVHAVSTPK 368

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224123886|ref|XP_002330233.1| predicted protein [Populus trichocarpa] gi|118481990|gb|ABK92926.1| unknown [Populus trichocarpa] gi|222871689|gb|EEF08820.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225450755|ref|XP_002283583.1| PREDICTED: probable protein phosphatase 2C 73 [Vitis vinifera] gi|296089709|emb|CBI39528.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255542816|ref|XP_002512471.1| protein phosphatase 2c, putative [Ricinus communis] gi|223548432|gb|EEF49923.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|363807333|ref|NP_001242626.1| uncharacterized protein LOC100794039 [Glycine max] gi|255647130|gb|ACU24033.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356572950|ref|XP_003554628.1| PREDICTED: probable protein phosphatase 2C 73-like [Glycine max] Back     alignment and taxonomy information
>gi|357511799|ref|XP_003626188.1| hypothetical protein MTR_7g112490 [Medicago truncatula] gi|355501203|gb|AES82406.1| hypothetical protein MTR_7g112490 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356576817|ref|XP_003556526.1| PREDICTED: probable protein phosphatase 2C 73-like [Glycine max] Back     alignment and taxonomy information
>gi|356505797|ref|XP_003521676.1| PREDICTED: probable protein phosphatase 2C 73-like [Glycine max] Back     alignment and taxonomy information
>gi|449454051|ref|XP_004144769.1| PREDICTED: probable protein phosphatase 2C 73-like [Cucumis sativus] gi|449490868|ref|XP_004158730.1| PREDICTED: probable protein phosphatase 2C 73-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query403
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 0.741 0.801 0.740 7.7e-146
TAIR|locus:2078117358 AT3G05640 [Arabidopsis thalian 0.729 0.821 0.720 1.3e-141
TAIR|locus:2086755351 AT3G16800 [Arabidopsis thalian 0.702 0.806 0.573 8.2e-106
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.409 0.327 0.569 7.4e-84
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.369 0.332 0.583 6.5e-81
TAIR|locus:2032880491 AT1G16220 [Arabidopsis thalian 0.374 0.307 0.596 4.5e-80
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.590 0.515 0.496 2e-77
TAIR|locus:504955459468 PP2C52 "AT4G03415" [Arabidopsi 0.610 0.525 0.463 2e-75
TAIR|locus:2149775382 AT5G01700 [Arabidopsis thalian 0.607 0.641 0.461 1.4e-68
TAIR|locus:2180612331 AT5G26010 [Arabidopsis thalian 0.570 0.694 0.454 1.6e-63
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1216 (433.1 bits), Expect = 7.7e-146, Sum P(2) = 7.7e-146
 Identities = 223/301 (74%), Positives = 264/301 (87%)

Query:     1 MGHFSSMFYGLARSFSIRKGKNSE-SCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNN 59
             MGHFSSMF GLARSFSI+K KN+  +C  + AA+ MA EAK+ E+IL+SSG+VNV  SNN
Sbjct:     1 MGHFSSMFNGLARSFSIKKVKNNNGNCDAKEAADEMASEAKKKELILKSSGYVNVQGSNN 60

Query:    60 FAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLC 119
              A++FSKRGEKGVNQDCA+VWE FGCQ DM+FCGIFDGHGPWGH+VAK+VR SMP SLLC
Sbjct:    61 LASLFSKRGEKGVNQDCALVWEGFGCQEDMIFCGIFDGHGPWGHYVAKQVRNSMPLSLLC 120

Query:   120 NWQETLAEASLLPDIDLD-SDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTA 178
             NWQ+ LA+A+L P++DL+ S+KK  RF+IWK SY+KTCA VDQELE HR+IDS+YSGTTA
Sbjct:   121 NWQKILAQATLEPELDLEGSNKKISRFDIWKQSYLKTCATVDQELEHHRKIDSYYSGTTA 180

Query:   179 LTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFC 238
             LTIVRQGE I VANVGDSRAVLA  S++GSLV VQLT+DFKPNLP E ERII CKGRVFC
Sbjct:   181 LTIVRQGEVIYVANVGDSRAVLAMESDEGSLVAVQLTLDFKPNLPQEKERIIGCKGRVFC 240

Query:   239 LEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDG 298
             L+DEPGVHRVW P+ E PGLAMSRAFGDYC+K+YGL+SVPEVTQRHI+++D F++LA+DG
Sbjct:   241 LDDEPGVHRVWQPDAETPGLAMSRAFGDYCIKEYGLVSVPEVTQRHISTKDHFIILASDG 300

Query:   299 V 299
             +
Sbjct:   301 I 301
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
TAIR|locus:2078117 AT3G05640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086755 AT3G16800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955459 PP2C52 "AT4G03415" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149775 AT5G01700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180612 AT5G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0WRB2P2C73_ARATH3, ., 1, ., 3, ., 1, 60.67260.87090.9410yesno
Q6L482P2C48_ORYSJ3, ., 1, ., 3, ., 1, 60.53260.85600.9773yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_XIII0701
hypothetical protein (368 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query403
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-60
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-41
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 7e-31
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 2e-21
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-15
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 2e-09
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  196 bits (500), Expect = 1e-60
 Identities = 93/334 (27%), Positives = 138/334 (41%), Gaps = 85/334 (25%)

Query: 59  NFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLL 118
             A V  K G++  N+D  ++      + D    G+FDGHG  GH   +   + +   LL
Sbjct: 1   FSAGVSDKGGDRKTNEDAVVIKPNLNNE-DGGLFGVFDGHG--GHAAGEFASKLLVEELL 57

Query: 119 CNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQ--IDSFYSGT 176
              +ETL  +    +  L                 K     D+E+ +  Q   D   SGT
Sbjct: 58  EELEETLTLSEEDIEEAL----------------RKAFLRADEEILEEAQDEPDDARSGT 101

Query: 177 TALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRV 236
           TA+  + +G  + VANVGDSRAVL    E      VQLT D KP    E ERI +  GRV
Sbjct: 102 TAVVALIRGNKLYVANVGDSRAVLCRNGE-----AVQLTKDHKPVNEEERERIEKAGGRV 156

Query: 237 FCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLAT 296
                                LA++RA GD+ +K  G+ + P+VT   +T  D F++LA+
Sbjct: 157 S-------------NGRVPGVLAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDFLILAS 202

Query: 297 DGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSSTPNR--- 353
           DG                                   +WDV+SNQEA+ IV S   +   
Sbjct: 203 DG-----------------------------------LWDVLSNQEAVDIVRSELAKEDL 227

Query: 354 AKSAKRLVECAVHAWKRKRKGIAMDDISAICLFF 387
            ++A+ LV+ A+            D+I+ + +  
Sbjct: 228 QEAAQELVDLALRRGSH-------DNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 403
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.96
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.88
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.81
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.76
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.62
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.35
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.12
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 97.45
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=4.5e-50  Score=400.54  Aligned_cols=268  Identities=37%  Similarity=0.534  Sum_probs=229.9

Q ss_pred             eeecCCCceEEEEeeeCCCCCCcceEEEecccc-----cCCCceEEEEEcCCCCCchHHHHHHHHHHHHHHHHHHHHHHh
Q 015633           52 VNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFG-----CQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLA  126 (403)
Q Consensus        52 ~~~~~s~~~~~~~s~~G~r~~nED~~~v~~~~~-----~~~~~~~~gV~DGhGg~G~~~s~~~~~~l~~~l~~~~~~~~~  126 (403)
                      .....+....++++.+|.|..|||.+.....+.     ......|||||||||  |+.+|+|++++|+..+.+++...  
T Consensus        33 ~~~~~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHG--G~~~A~~~~~~L~~~l~~~~~~~--  108 (330)
T KOG0698|consen   33 LSINESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHG--GDLAAKFAAKHLHKNLLEQLAFP--  108 (330)
T ss_pred             ccccccccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhhcc--
Confidence            344566677889999999999999998876643     233689999999999  99999999999999999865510  


Q ss_pred             hhccCCCcccccccccchHHHHHHHHHHHHH-HHHHHHHhccccCCcCccceEEEEEEeCC-eEEEEEeccceEEEEEeC
Q 015633          127 EASLLPDIDLDSDKKTHRFNIWKHSYVKTCA-AVDQELEQHRQIDSFYSGTTALTIVRQGE-FIMVANVGDSRAVLATTS  204 (403)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~al~~a~~-~id~~l~~~~~~~~~~~GtTa~~~li~~~-~l~vaNvGDSRavl~r~~  204 (403)
                                      .....++.++.++|. .+|.++.+. ..+...+||||+++++..+ +|||||+|||||||++. 
T Consensus       109 ----------------~~~~~~~~a~~~~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~-  170 (330)
T KOG0698|consen  109 ----------------KDRQDVKDALRRAFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRK-  170 (330)
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecC-
Confidence                            011468899999999 699999875 2223568999999888754 99999999999999987 


Q ss_pred             CCCceeEEEeccCCCCCCHHHHHHHHHcCCeeeeecCCCCceeeecCCCCCCCcccccccCCccccccCcccCceEEEEE
Q 015633          205 EDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRH  284 (403)
Q Consensus       205 ~~g~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~gl~~sRa~GD~~~k~~gv~s~Pdv~~~~  284 (403)
                        |. .+++||.||+|+.+.|++||.++||+|....   +++|||      ++|+|||||||+++|.++++++|++.+..
T Consensus       171 --~~-~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~---~~~Rv~------G~LavsRa~GD~~~k~~~v~a~Pei~~~~  238 (330)
T KOG0698|consen  171 --GG-VAVQLSVDHKPDREDERERIEAAGGRVSNWG---GVWRVN------GVLAVSRAFGDVELKSQGVIAEPEIQQVK  238 (330)
T ss_pred             --CC-eeeeCCCCCCCCcHHHHHHHHHcCCEEEEcC---CcceEe------ceEEEeeecCCHHhcCCcEecCCceEEEE
Confidence              43 8999999999999999999999999999643   377884      67999999999999988899999999999


Q ss_pred             ecCCCeEEEEecCCCCCCCcchhhhHhHHHHHHHHhhhhhhhhhcccceeeeecCHHHHHHHHhc----CCCHHHHHHHH
Q 015633          285 ITSRDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSS----TPNRAKSAKRL  360 (403)
Q Consensus       285 l~~~d~flVLaSDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lwd~ls~~ei~~iv~~----~~~~~~aA~~L  360 (403)
                      +++.|+||||||||                                   |||++++||++++|+.    ...+..+++.|
T Consensus       239 ~~~~deFLiLasDG-----------------------------------iwDv~s~qeav~~V~~~~~~~~~~~~a~~~l  283 (330)
T KOG0698|consen  239 INSDDEFLILASDG-----------------------------------IWDVVSNQEAVDLVRDELASISSPLAAAKLL  283 (330)
T ss_pred             cCCCCcEEEEeCCc-----------------------------------hhcccChHHHHHHHHHHhhccccHHHHHHHH
Confidence            99999999999999                                   9999999999999999    55889999999


Q ss_pred             HHHHHHhhhhcCCCCCCCceEEEEEEccCCCCCcc
Q 015633          361 VECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQ  395 (403)
Q Consensus       361 v~~A~~~~~~~~~G~~~DNiTvIvv~~~~~~~~~~  395 (403)
                      ...|..+      | +.||||||||+|.+.+..+.
T Consensus       284 ~~~a~~~------~-s~DnitvvvV~l~~~~~~~~  311 (330)
T KOG0698|consen  284 ATEALSR------G-SKDNITVVVVRLKSSPKSPS  311 (330)
T ss_pred             HHHHhhc------C-CCCCeEEEEEEecCcccccc
Confidence            9999984      5 99999999999998875433

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query403
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 6e-14
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 7e-14
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-13
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-13
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-13
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-12
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 2e-12
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 5e-11
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 5e-11
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 6e-11
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 6e-11
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 7e-11
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 7e-11
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 8e-09
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 2e-08
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 1e-07
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-07
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 1e-06
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 4e-06
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 4e-06
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure 
Iteration: 1

 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 83  FGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKT 142
           F  Q+   F G++DGHG  G  VA   RE M  +L    +E   E  +L D D   +K  
Sbjct: 46  FDPQSAAHFFGVYDGHG--GSQVANYCRERMHLALA---EEIAKEKPMLSDGDTWLEK-- 98
Query: 143 HRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLAT 202
                WK +   +   VD E+E    +     G+T++  V     I VAN GDSRAVL  
Sbjct: 99  -----WKKALFNSFLRVDSEIES---VAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCR 150
Query: 203 TSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSR 262
                    + L+VD KP+   EA RI    G+V            W        LAMSR
Sbjct: 151 GK-----TALPLSVDHKPDREDEAARIEAAGGKVI----------QWNGARVFGVLAMSR 195
Query: 263 AFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGV 299
           + GD  +K   +I  PEVT       D  ++LA+DGV
Sbjct: 196 SIGDRYLKP-SIIPDPEVTAVKRVKEDDCLILASDGV 231
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query403
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 4e-97
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 3e-53
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-51
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 5e-51
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 7e-48
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-46
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 2e-46
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 7e-45
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 3e-43
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-42
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 4e-42
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-36
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 9e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 2e-04
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 5e-04
1txo_A237 Putative bacterial enzyme; serine/threonine protei 6e-04
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  291 bits (748), Expect = 4e-97
 Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 52/341 (15%)

Query: 61  AAVFSKRGEKGVNQDCAIVWEEF-GCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLC 119
           AA+F+  G +   +D   +  +    + D  F G+FDG    G F ++ V++ +   L+ 
Sbjct: 24  AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV--GDFASENVKDLVVPQLIS 81

Query: 120 NWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQE-LEQHRQIDSFYSGTTA 178
           +         +L      ++       +   +        D E ++   Q++  Y+ +T+
Sbjct: 82  SP-AWQEVTEMLRSDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTS 140

Query: 179 LTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFC 238
           +T V    F+ V ++GDSR  +   + +G L    LTVD KP++P+E  RI++  G V  
Sbjct: 141 VTAVLAKGFVAVGHLGDSRIAMGVETPNG-LNCEFLTVDHKPDMPHEKLRIMRNGGSVEY 199

Query: 239 LEDEPGVHRVWL--------PNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQ 290
           L +      +            E+   L  SRAFG   +K YGL + P+V    +T + +
Sbjct: 200 LHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHR 259

Query: 291 FVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSST 350
            ++LATDG                                   +WDV+S  +A++I    
Sbjct: 260 VMILATDG-----------------------------------LWDVMSAAQAVEIAMQA 284

Query: 351 PNRAKS-AKRLVECAVHAWKRKRKGIAMDDISAICLFFHSS 390
               ++ A+ LVE  +   + + +    D+I+A+ +FF  +
Sbjct: 285 RQEGRNPAQALVEMTLAEQQSRNQS--ADNITAMTVFFKKT 323
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query403
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.76
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.71
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.47
3f79_A255 Probable two-component response regulator; adaptor 99.47
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.0
3eq2_A394 Probable two-component response regulator; adaptor 97.83
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
Probab=100.00  E-value=1.1e-47  Score=376.02  Aligned_cols=254  Identities=27%  Similarity=0.399  Sum_probs=204.5

Q ss_pred             CceEEEEeeeCCCCCCcceEEEecccccCCCceEEEEEcCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccc
Q 015633           58 NNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLD  137 (403)
Q Consensus        58 ~~~~~~~s~~G~r~~nED~~~v~~~~~~~~~~~~~gV~DGhGg~G~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  137 (403)
                      ...++.++.+|.|..|||++++...+.  .+..||+||||||  |+.+|+++++.++..|.....  +.           
T Consensus        22 ~~~~~~~s~~G~R~~nED~~~~~~~~~--~~~~l~~V~DGhG--G~~~a~~as~~~~~~l~~~~~--~~-----------   84 (304)
T 2i0o_A           22 FLASGSSSMQGWRISQEDAHNCILNFD--DQCSFFAVYDGHG--GAEVAQYCSLHLPTFLKTVEA--YG-----------   84 (304)
T ss_dssp             SEEEEEEEEEESSSCCCEEEEEEEEEE--TTEEEEEEEECSS--CSHHHHHHHHHHHHHHHHSHH--HH-----------
T ss_pred             ceEEEEeecCCCCCCccCEEEEEeccC--CCeEEEEEEcCCC--CHHHHHHHHHHHHHHHHhhhh--cc-----------
Confidence            445788999999999999998876543  4678999999999  999999999999988875432  10           


Q ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHhcc----------------ccCCcCccceEEEEEEeCCeEEEEEeccceEEEE
Q 015633          138 SDKKTHRFNIWKHSYVKTCAAVDQELEQHR----------------QIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLA  201 (403)
Q Consensus       138 ~~~~~~~~~~~~~al~~a~~~id~~l~~~~----------------~~~~~~~GtTa~~~li~~~~l~vaNvGDSRavl~  201 (403)
                             ...+++++.++|..+++.+.+..                ......+|||++++++.++++|+|||||||||++
T Consensus        85 -------~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~  157 (304)
T 2i0o_A           85 -------RKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVC  157 (304)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEE
T ss_pred             -------cccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEE
Confidence                   01245677778888887765321                1124569999999999999999999999999999


Q ss_pred             EeCCCCceeEEEeccCCCCCCHHHHHHHHHcCCeeeeecCCCCceeeecCCCCCCCcccccccCCcccccc--------C
Q 015633          202 TTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDY--------G  273 (403)
Q Consensus       202 r~~~~g~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~gl~~sRa~GD~~~k~~--------g  273 (403)
                      |.   |  .+++||.||+|..+.|++||.+.||.+..      ..|+      .+.+++||||||+.+|..        +
T Consensus       158 r~---g--~~~~LT~DH~~~~~~e~~rI~~~gg~v~~------~~rv------~g~l~ltRalGd~~~k~~~~l~~~~~~  220 (304)
T 2i0o_A          158 RN---G--KALEMSFDHKPEDTVEYQRIEKAGGRVTL------DGRV------NGGLNLSRAIGDHGYKMNKSLPAEEQM  220 (304)
T ss_dssp             ET---T--EEEECCCCCCTTSHHHHHHHHHTTCCBCT------TSCB------TTSCSCSBCEECGGGCCCTTSCGGGSS
T ss_pred             EC---C--EEEEcCCCcCCcCHHHHHHHHhCCCEEEe------CCeE------cCceeccccccCHHHccCccCCccCCe
Confidence            97   8  89999999999999999999999999862      1244      567999999999998853        4


Q ss_pred             cccCceEEEEEecCCCeEEEEecCCCCCCCcchhhhHhHHHHHHHHhhhhhhhhhcccceeeeecCHHHHHHHHhc----
Q 015633          274 LISVPEVTQRHITSRDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSS----  349 (403)
Q Consensus       274 v~s~Pdv~~~~l~~~d~flVLaSDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lwd~ls~~ei~~iv~~----  349 (403)
                      ++++|++..+++.++|.||||||||                                   |||+++++|+++++..    
T Consensus       221 v~~~pdi~~~~l~~~D~fllL~SDG-----------------------------------l~d~l~~~ei~~~v~~~~~~  265 (304)
T 2i0o_A          221 ISALPDIEKITVGPEDEFMVLACDG-----------------------------------IWNFMTSEQVVQFVQERINK  265 (304)
T ss_dssp             SBCCCEEEEEECCTTEEEEEEECHH-----------------------------------HHTTCCHHHHHHHHHHHHTS
T ss_pred             EEeeCeEEEEEcCCCCeEEEEECcC-----------------------------------ccccCCHHHHHHHHHHHHhh
Confidence            6889999999999999999999999                                   9999999999999986    


Q ss_pred             -CCCHHHHHHHHHHHHHHhhhhcCCCCCCCceEEEEEEcc
Q 015633          350 -TPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFH  388 (403)
Q Consensus       350 -~~~~~~aA~~Lv~~A~~~~~~~~~G~~~DNiTvIvv~~~  388 (403)
                       ..+++.+|++|++.|+.+|.+.. +++.||||||||+|+
T Consensus       266 ~~~~~~~~a~~L~~~a~~~~~~g~-~g~~DNiTvivv~~~  304 (304)
T 2i0o_A          266 PGMKLSKICEELFDHCLAPHTRGD-GTGCDNMTAIIVQFK  304 (304)
T ss_dssp             TTCCHHHHHHHHHHHHC-------------CEEEEEEEEC
T ss_pred             cCCCHHHHHHHHHHHHHHhhhccC-CCCCCCeEEEEEEeC
Confidence             56899999999999998764321 237899999999974
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 403
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 9e-24
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 3e-06
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.1 bits (243), Expect = 9e-24
 Identities = 64/332 (19%), Positives = 106/332 (31%), Gaps = 63/332 (18%)

Query: 62  AVFSKRGEKGVNQD-CAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCN 120
            + S +G +   +D    V           F  ++DGH   G  VAK   E +   +  N
Sbjct: 24  GLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNN 81

Query: 121 WQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALT 180
                            +    +  N  +  +++    +    E+    D   SG+TA+ 
Sbjct: 82  QD---------FKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADR--SGSTAVG 130

Query: 181 IVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLE 240
           ++   +     N GDSR +L    +         T D KP+ P E ERI    G V    
Sbjct: 131 VLISPQHTYFINCGDSRGLLCRNRK-----VHFFTQDHKPSNPLEKERIQNAGGSVMI-- 183

Query: 241 DEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHIT-SRDQFVVLATDGV 299
                    L      G    +        +  +   PEV     +   DQF++LA DG+
Sbjct: 184 ---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 240

Query: 300 SIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSSTPNRAKSAKR 359
                                              WDV+ N+E    V S        ++
Sbjct: 241 -----------------------------------WDVMGNEELCDFVRSRLEVTDDLEK 265

Query: 360 LVECAVHAWKRKRKGIAMDDISAICLFFHSSP 391
           +    V     K    + D++S I + F ++P
Sbjct: 266 VCNEVVDTCLYKG---SRDNMSVILICFPNAP 294
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query403
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-51  Score=398.56  Aligned_cols=257  Identities=28%  Similarity=0.376  Sum_probs=218.4

Q ss_pred             eEEEEeeeCCCCCCcceEEEeccccc-CCCceEEEEEcCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccccc
Q 015633           60 FAAVFSKRGEKGVNQDCAIVWEEFGC-QADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDS  138 (403)
Q Consensus        60 ~~~~~s~~G~r~~nED~~~v~~~~~~-~~~~~~~gV~DGhGg~G~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  138 (403)
                      -+|++|.+|.|..|||++++..++.. .++..|||||||||  |+.+|+++++.|+..|.........            
T Consensus        22 ~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~~------------   87 (295)
T d1a6qa2          22 RYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGS------------   87 (295)
T ss_dssp             EEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCS------------
T ss_pred             EEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhhhccc------------
Confidence            46899999999999999988766532 35678999999999  9999999999999999876542111            


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHhcc--ccCCcCccceEEEEEEeCCeEEEEEeccceEEEEEeCCCCceeEEEecc
Q 015633          139 DKKTHRFNIWKHSYVKTCAAVDQELEQHR--QIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTV  216 (403)
Q Consensus       139 ~~~~~~~~~~~~al~~a~~~id~~l~~~~--~~~~~~~GtTa~~~li~~~~l~vaNvGDSRavl~r~~~~g~~~~~qLT~  216 (403)
                       ......+.++++|.++|.++++.+....  ......+|||++++++.++++|||||||||||+++.   |  .+++||.
T Consensus        88 -~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~---~--~~~~lT~  161 (295)
T d1a6qa2          88 -AGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRN---R--KVHFFTQ  161 (295)
T ss_dssp             -SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEET---T--EEEEECC
T ss_pred             -cccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeec---c--cceeecc
Confidence             1122345688889999999988875432  233456999999999999999999999999999997   8  8999999


Q ss_pred             CCCCCCHHHHHHHHHcCCeeeeecCCCCceeeecCCCCCCCcccccccCCccccccC--------cccCceEEEEEec-C
Q 015633          217 DFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYG--------LISVPEVTQRHIT-S  287 (403)
Q Consensus       217 DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~gl~~sRa~GD~~~k~~g--------v~s~Pdv~~~~l~-~  287 (403)
                      ||+|.++.|++||.++||.+..       .|+      .+.|++||||||+.+|..+        ++++|+|..+++. +
T Consensus       162 dH~~~~~~E~~Ri~~~gg~v~~-------~r~------~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~  228 (295)
T d1a6qa2         162 DHKPSNPLEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEE  228 (295)
T ss_dssp             CCCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTT
T ss_pred             ccCcccHHHHhhHhhcCCcccc-------ccc------CCceeeeeccCcHHhhhccccCcccccccccccceEEEeecc
Confidence            9999999999999999999873       343      5679999999999998654        8999999999986 6


Q ss_pred             CCeEEEEecCCCCCCCcchhhhHhHHHHHHHHhhhhhhhhhcccceeeeecCHHHHHHHHhc----CCCHHHHHHHHHHH
Q 015633          288 RDQFVVLATDGVSIMHYYDITIIFKLFLFVKIKENKLKIFIGLILQVWDVISNQEAIQIVSS----TPNRAKSAKRLVEC  363 (403)
Q Consensus       288 ~d~flVLaSDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lwd~ls~~ei~~iv~~----~~~~~~aA~~Lv~~  363 (403)
                      +|+||||||||                                   |||+|+++|++++|+.    ..+++.+|+.|++.
T Consensus       229 ~~~flvL~SDG-----------------------------------l~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~  273 (295)
T d1a6qa2         229 DDQFIILACDG-----------------------------------IWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDT  273 (295)
T ss_dssp             TEEEEEEECHH-----------------------------------HHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred             cceeEeeecCc-----------------------------------ccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence            67899999999                                   9999999999999865    46799999999999


Q ss_pred             HHHhhhhcCCCCCCCceEEEEEEccCCC
Q 015633          364 AVHAWKRKRKGIAMDDISAICLFFHSSP  391 (403)
Q Consensus       364 A~~~~~~~~~G~~~DNiTvIvv~~~~~~  391 (403)
                      |+++      | +.||||||||+|+..|
T Consensus       274 A~~~------g-s~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         274 CLYK------G-SRDNMSVILICFPNAP  294 (295)
T ss_dssp             HHHT------T-CCSCEEEEEEECTTSC
T ss_pred             HHhc------C-CCCCeEEEEEeccCCC
Confidence            9985      5 8999999999998765
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure