Query 015636
Match_columns 403
No_of_seqs 394 out of 2754
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 08:09:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015636.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015636hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 1.1E-76 2.3E-81 579.2 26.8 286 79-381 1-300 (371)
2 PRK14296 chaperone protein Dna 100.0 2.9E-67 6.2E-72 525.3 27.5 303 81-390 3-323 (372)
3 PRK14279 chaperone protein Dna 100.0 1.6E-66 3.4E-71 523.3 27.5 301 80-380 7-328 (392)
4 PRK14288 chaperone protein Dna 100.0 1.6E-66 3.4E-71 519.8 26.2 291 81-390 2-308 (369)
5 PRK14286 chaperone protein Dna 100.0 1.8E-65 3.8E-70 512.8 27.6 287 81-379 3-305 (372)
6 PRK14285 chaperone protein Dna 100.0 6E-65 1.3E-69 507.8 27.3 288 81-379 2-301 (365)
7 PRK14282 chaperone protein Dna 100.0 1.3E-64 2.7E-69 506.7 28.1 291 81-380 3-312 (369)
8 PRK14277 chaperone protein Dna 100.0 1.3E-64 2.8E-69 509.1 27.5 295 81-380 4-314 (386)
9 PRK14284 chaperone protein Dna 100.0 1.1E-64 2.4E-69 510.3 26.7 296 82-379 1-314 (391)
10 PRK14298 chaperone protein Dna 100.0 9.6E-65 2.1E-69 508.0 26.0 282 81-379 4-299 (377)
11 PRK14295 chaperone protein Dna 100.0 2.3E-64 4.9E-69 507.2 27.9 299 80-380 7-322 (389)
12 PRK14287 chaperone protein Dna 100.0 3.4E-64 7.4E-69 503.3 27.8 280 81-380 3-297 (371)
13 PRK14294 chaperone protein Dna 100.0 3E-64 6.5E-69 503.5 26.9 284 81-380 3-299 (366)
14 PRK14276 chaperone protein Dna 100.0 4.9E-64 1.1E-68 503.9 27.4 288 81-380 3-305 (380)
15 PRK14301 chaperone protein Dna 100.0 3.8E-64 8.2E-69 503.3 26.2 285 81-380 3-299 (373)
16 PRK14280 chaperone protein Dna 100.0 6.5E-64 1.4E-68 502.4 27.4 285 81-380 3-302 (376)
17 PRK10767 chaperone protein Dna 100.0 9.1E-64 2E-68 501.3 27.4 285 81-380 3-297 (371)
18 PRK14297 chaperone protein Dna 100.0 9E-64 1.9E-68 502.4 27.2 288 81-380 3-307 (380)
19 PRK14278 chaperone protein Dna 100.0 1.2E-63 2.6E-68 500.5 27.4 279 82-379 3-298 (378)
20 PTZ00037 DnaJ_C chaperone prot 100.0 7E-64 1.5E-68 505.9 25.6 285 75-390 21-326 (421)
21 PRK14281 chaperone protein Dna 100.0 9.5E-63 2.1E-67 497.0 25.6 298 81-380 2-321 (397)
22 PRK14291 chaperone protein Dna 100.0 1.9E-62 4.1E-67 492.8 26.3 291 81-380 2-311 (382)
23 PRK14300 chaperone protein Dna 100.0 4.3E-62 9.4E-67 488.6 27.2 286 82-379 3-300 (372)
24 TIGR02349 DnaJ_bact chaperone 100.0 6.6E-62 1.4E-66 485.4 26.5 285 83-380 1-302 (354)
25 PRK14283 chaperone protein Dna 100.0 2.3E-61 5.1E-66 484.5 26.5 290 81-380 4-305 (378)
26 PRK14290 chaperone protein Dna 100.0 3E-61 6.5E-66 481.7 26.9 280 82-380 3-305 (365)
27 PRK14289 chaperone protein Dna 100.0 2.1E-60 4.6E-65 479.0 26.1 297 81-380 4-313 (386)
28 PRK14293 chaperone protein Dna 100.0 1.2E-59 2.5E-64 471.7 25.5 279 82-380 3-302 (374)
29 PRK14292 chaperone protein Dna 100.0 1.1E-58 2.5E-63 464.5 24.9 278 82-380 2-297 (371)
30 KOG0712 Molecular chaperone (D 100.0 3.2E-55 6.9E-60 422.8 19.0 277 81-383 3-291 (337)
31 PRK14299 chaperone protein Dna 100.0 5E-46 1.1E-50 361.3 23.9 217 81-379 3-235 (291)
32 PRK10266 curved DNA-binding pr 100.0 4.7E-45 1E-49 357.0 25.2 234 82-380 4-244 (306)
33 KOG0715 Molecular chaperone (D 100.0 6.4E-40 1.4E-44 316.3 13.5 240 82-357 43-288 (288)
34 KOG0713 Molecular chaperone (D 100.0 5.1E-38 1.1E-42 299.8 9.4 263 80-372 14-278 (336)
35 TIGR03835 termin_org_DnaJ term 100.0 4.2E-32 9.1E-37 281.4 20.1 134 204-390 658-795 (871)
36 KOG0714 Molecular chaperone (D 99.8 2.1E-20 4.7E-25 180.4 12.4 247 81-380 2-286 (306)
37 KOG0716 Molecular chaperone (D 99.8 1.2E-19 2.6E-24 168.8 5.5 72 81-152 30-101 (279)
38 COG0484 DnaJ DnaJ-class molecu 99.8 1.1E-18 2.4E-23 171.5 12.3 138 206-347 134-343 (371)
39 COG2214 CbpA DnaJ-class molecu 99.8 6.7E-18 1.4E-22 155.9 12.9 68 80-147 4-72 (237)
40 KOG0691 Molecular chaperone (D 99.7 2E-18 4.3E-23 165.9 6.7 74 81-154 4-77 (296)
41 PF00226 DnaJ: DnaJ domain; I 99.7 4.5E-18 9.7E-23 128.1 6.2 63 83-145 1-64 (64)
42 KOG0718 Molecular chaperone (D 99.7 4.4E-18 9.4E-23 168.0 6.3 77 79-155 6-85 (546)
43 PTZ00341 Ring-infected erythro 99.7 6.3E-18 1.4E-22 180.0 5.9 74 79-153 570-643 (1136)
44 KOG0717 Molecular chaperone (D 99.7 4.8E-17 1E-21 160.7 6.2 71 79-149 5-76 (508)
45 KOG0719 Molecular chaperone (D 99.7 1.2E-16 2.6E-21 145.4 6.2 70 80-149 12-83 (264)
46 smart00271 DnaJ DnaJ molecular 99.6 3.3E-16 7.1E-21 116.1 6.1 59 82-140 1-60 (60)
47 PRK14282 chaperone protein Dna 99.6 7.8E-16 1.7E-20 154.6 10.5 141 206-350 144-359 (369)
48 PRK14290 chaperone protein Dna 99.6 1.5E-15 3.3E-20 152.3 10.2 141 207-351 142-353 (365)
49 cd06257 DnaJ DnaJ domain or J- 99.6 1.2E-15 2.7E-20 110.9 6.3 55 83-137 1-55 (55)
50 PHA03102 Small T antigen; Revi 99.6 6.9E-16 1.5E-20 134.9 5.7 66 82-151 5-72 (153)
51 PRK14298 chaperone protein Dna 99.6 1.5E-15 3.3E-20 152.8 8.8 142 206-351 133-348 (377)
52 PRK14294 chaperone protein Dna 99.6 2.1E-15 4.6E-20 151.4 9.2 120 228-351 160-347 (366)
53 PRK14285 chaperone protein Dna 99.6 3.7E-15 8.1E-20 149.4 9.9 139 206-348 138-347 (365)
54 KOG0721 Molecular chaperone (D 99.6 2E-15 4.4E-20 136.4 6.6 71 79-149 96-166 (230)
55 PRK10767 chaperone protein Dna 99.6 4E-15 8.6E-20 149.7 9.3 141 207-351 135-345 (371)
56 KOG0624 dsRNA-activated protei 99.6 2.7E-15 5.8E-20 144.1 7.2 69 79-147 391-462 (504)
57 PRK14301 chaperone protein Dna 99.6 6.4E-15 1.4E-19 148.1 9.4 139 206-348 136-344 (373)
58 PRK14288 chaperone protein Dna 99.5 1.6E-14 3.4E-19 145.1 10.4 114 228-345 155-336 (369)
59 PRK14284 chaperone protein Dna 99.5 1.2E-14 2.6E-19 147.1 9.0 138 207-348 151-360 (391)
60 PRK14300 chaperone protein Dna 99.5 5.2E-14 1.1E-18 141.6 12.7 134 207-344 138-342 (372)
61 PRK14287 chaperone protein Dna 99.5 1.5E-14 3.2E-19 145.4 8.6 139 206-348 130-342 (371)
62 PRK14278 chaperone protein Dna 99.5 2.6E-14 5.5E-19 144.0 9.9 135 206-344 131-340 (378)
63 TIGR02349 DnaJ_bact chaperone 99.5 2.1E-14 4.4E-19 143.8 9.1 137 207-347 136-346 (354)
64 PRK14286 chaperone protein Dna 99.5 2.9E-14 6.3E-19 143.3 9.6 136 207-346 143-349 (372)
65 PRK14279 chaperone protein Dna 99.5 3.8E-14 8.3E-19 143.3 9.8 132 207-343 166-367 (392)
66 PRK14281 chaperone protein Dna 99.5 3.8E-14 8.3E-19 143.6 9.6 131 206-342 155-360 (397)
67 PRK14280 chaperone protein Dna 99.5 4.9E-14 1.1E-18 141.9 9.8 134 207-344 136-343 (376)
68 PRK14276 chaperone protein Dna 99.5 5.2E-14 1.1E-18 141.9 9.2 134 207-344 139-346 (380)
69 PRK14293 chaperone protein Dna 99.5 6.8E-14 1.5E-18 140.9 8.9 120 228-351 159-351 (374)
70 PRK05014 hscB co-chaperone Hsc 99.5 5.7E-14 1.2E-18 126.2 7.0 66 82-147 1-73 (171)
71 PRK14296 chaperone protein Dna 99.5 1.1E-13 2.3E-18 139.2 9.6 133 207-343 142-350 (372)
72 PRK14295 chaperone protein Dna 99.5 1.2E-13 2.6E-18 139.7 9.8 132 207-343 159-361 (389)
73 PRK14297 chaperone protein Dna 99.5 1.1E-13 2.3E-18 139.7 9.3 133 207-343 141-347 (380)
74 PRK14289 chaperone protein Dna 99.5 1.1E-13 2.4E-18 139.9 9.2 131 206-340 146-350 (386)
75 PRK14277 chaperone protein Dna 99.5 1.4E-13 3E-18 139.2 9.8 132 207-342 148-353 (386)
76 PRK14292 chaperone protein Dna 99.5 1.3E-13 2.8E-18 138.8 9.3 137 207-347 132-341 (371)
77 PRK01356 hscB co-chaperone Hsc 99.5 7.8E-14 1.7E-18 124.6 6.6 67 82-148 2-73 (166)
78 PRK03578 hscB co-chaperone Hsc 99.5 1.1E-13 2.4E-18 124.6 7.3 67 81-147 5-78 (176)
79 PRK00294 hscB co-chaperone Hsc 99.5 1.3E-13 2.9E-18 123.7 7.6 69 80-148 2-77 (173)
80 PRK14291 chaperone protein Dna 99.4 5.2E-13 1.1E-17 134.8 12.3 128 206-338 148-346 (382)
81 PTZ00037 DnaJ_C chaperone prot 99.4 5.3E-13 1.2E-17 135.7 12.1 125 228-362 165-366 (421)
82 PRK14283 chaperone protein Dna 99.4 3E-13 6.5E-18 136.4 9.7 113 228-344 162-346 (378)
83 KOG0550 Molecular chaperone (D 99.4 2.9E-13 6.4E-18 132.9 4.7 69 79-147 370-439 (486)
84 KOG0720 Molecular chaperone (D 99.4 4.5E-13 9.8E-18 132.9 5.4 67 81-148 234-300 (490)
85 KOG0722 Molecular chaperone (D 99.3 4.7E-13 1E-17 123.4 3.0 67 81-148 32-98 (329)
86 PTZ00100 DnaJ chaperone protei 99.3 1.8E-12 3.8E-17 107.9 5.7 54 79-136 62-115 (116)
87 PRK09430 djlA Dna-J like membr 99.2 8.5E-12 1.8E-16 119.9 6.4 59 79-137 197-262 (267)
88 PHA02624 large T antigen; Prov 99.2 2.4E-11 5.1E-16 126.4 5.5 59 82-144 11-71 (647)
89 PRK01773 hscB co-chaperone Hsc 99.1 1E-10 2.2E-15 105.1 7.0 67 82-148 2-75 (173)
90 COG5407 SEC63 Preprotein trans 99.1 6.7E-11 1.5E-15 117.0 4.7 70 81-150 97-171 (610)
91 PF00684 DnaJ_CXXCXGXG: DnaJ c 99.0 7E-11 1.5E-15 89.5 1.7 57 232-288 1-66 (66)
92 TIGR00714 hscB Fe-S protein as 99.0 5.3E-10 1.2E-14 99.1 6.5 57 93-149 2-63 (157)
93 KOG1150 Predicted molecular ch 99.0 4.7E-10 1E-14 100.3 4.5 67 80-146 51-118 (250)
94 KOG0712 Molecular chaperone (D 98.9 4.6E-09 1E-13 102.6 7.2 106 230-338 144-324 (337)
95 PF01556 CTDII: DnaJ C termina 98.8 3.4E-09 7.4E-14 83.5 5.0 74 204-341 1-75 (81)
96 COG5269 ZUO1 Ribosome-associat 98.7 9.8E-09 2.1E-13 95.8 4.1 74 75-148 36-114 (379)
97 PRK14299 chaperone protein Dna 98.6 4.2E-08 9.2E-13 95.7 4.2 83 200-348 198-280 (291)
98 PLN03165 chaperone protein dna 98.4 3.8E-07 8.2E-12 75.6 4.5 57 227-292 39-100 (111)
99 PRK10266 curved DNA-binding pr 98.4 8E-07 1.7E-11 87.4 7.5 77 200-343 206-282 (306)
100 KOG1789 Endocytosis protein RM 98.3 8.9E-07 1.9E-11 95.5 5.9 58 77-137 1276-1337(2235)
101 KOG0568 Molecular chaperone (D 98.3 1.2E-06 2.7E-11 80.2 5.3 56 82-138 47-103 (342)
102 PF01556 CTDII: DnaJ C termina 98.0 5.1E-06 1.1E-10 65.4 3.7 45 346-390 1-50 (81)
103 TIGR03835 termin_org_DnaJ term 98.0 9.9E-06 2.1E-10 86.2 6.2 69 82-151 2-70 (871)
104 TIGR02642 phage_xxxx uncharact 97.9 6.9E-06 1.5E-10 74.4 3.5 46 267-313 102-149 (186)
105 PF00684 DnaJ_CXXCXGXG: DnaJ c 97.8 9.4E-06 2E-10 61.3 2.1 44 227-274 13-66 (66)
106 KOG0723 Molecular chaperone (D 97.8 3.8E-05 8.2E-10 62.3 5.0 59 76-138 50-108 (112)
107 KOG3192 Mitochondrial J-type c 97.7 6E-05 1.3E-09 65.4 4.6 67 81-147 7-80 (168)
108 COG1107 Archaea-specific RecJ- 97.3 0.00012 2.5E-09 75.7 2.8 26 248-276 55-80 (715)
109 PLN03165 chaperone protein dna 96.9 0.00052 1.1E-08 57.0 2.2 41 231-278 54-100 (111)
110 COG1076 DjlA DnaJ-domain-conta 96.7 0.0016 3.5E-08 58.7 3.7 69 83-151 2-77 (174)
111 TIGR02642 phage_xxxx uncharact 96.7 0.0021 4.7E-08 58.3 4.3 41 247-289 100-140 (186)
112 COG1107 Archaea-specific RecJ- 96.6 0.0017 3.6E-08 67.4 3.5 62 230-292 3-82 (715)
113 KOG2813 Predicted molecular ch 96.4 0.0026 5.5E-08 61.4 3.5 61 229-299 198-277 (406)
114 COG1076 DjlA DnaJ-domain-conta 96.2 0.0026 5.5E-08 57.5 1.9 54 82-135 113-173 (174)
115 KOG0431 Auxilin-like protein a 95.0 0.025 5.5E-07 58.5 4.5 47 89-135 395-448 (453)
116 KOG2813 Predicted molecular ch 93.9 0.024 5.3E-07 54.8 1.3 38 228-278 233-270 (406)
117 KOG0715 Molecular chaperone (D 93.0 0.19 4.1E-06 49.1 5.8 90 223-318 175-269 (288)
118 PF03656 Pam16: Pam16; InterP 92.5 0.33 7.2E-06 41.4 5.9 60 79-142 55-114 (127)
119 PF11833 DUF3353: Protein of u 85.2 2.4 5.3E-05 38.9 6.3 40 91-138 1-41 (194)
120 KOG2824 Glutaredoxin-related p 84.3 0.74 1.6E-05 44.1 2.5 41 230-276 230-274 (281)
121 smart00709 Zpr1 Duplicated dom 83.2 1.5 3.2E-05 39.0 3.9 20 295-314 81-100 (160)
122 PF14687 DUF4460: Domain of un 81.6 3.4 7.4E-05 34.5 5.2 46 92-137 4-53 (112)
123 cd03031 GRX_GRX_like Glutaredo 79.6 1.1 2.4E-05 39.3 1.7 24 230-259 100-123 (147)
124 TIGR00630 uvra excinuclease AB 78.4 1.2 2.5E-05 50.4 1.9 32 247-278 737-773 (924)
125 PF13446 RPT: A repeated domai 76.9 4.1 8.9E-05 29.9 3.9 45 82-137 5-49 (62)
126 KOG0724 Zuotin and related mol 76.7 2.5 5.5E-05 41.9 3.6 54 94-147 4-61 (335)
127 TIGR00310 ZPR1_znf ZPR1 zinc f 75.5 5.1 0.00011 36.8 4.9 20 295-314 80-100 (192)
128 KOG2824 Glutaredoxin-related p 74.4 2.3 5E-05 40.8 2.4 37 247-290 230-274 (281)
129 cd03031 GRX_GRX_like Glutaredo 73.4 2.8 6E-05 36.8 2.5 37 247-290 100-145 (147)
130 PRK14714 DNA polymerase II lar 72.2 1.6 3.5E-05 49.9 1.0 64 219-293 658-724 (1337)
131 PRK00349 uvrA excinuclease ABC 72.0 2.8 6.1E-05 47.5 2.8 33 247-279 739-776 (943)
132 PRK00635 excinuclease ABC subu 64.2 4 8.7E-05 49.2 2.1 31 248-278 1609-1644(1809)
133 TIGR00340 zpr1_rel ZPR1-relate 62.9 11 0.00024 33.7 4.1 20 295-314 78-98 (163)
134 COG3128 PiuC Uncharacterized i 61.2 14 0.00031 33.6 4.5 45 342-386 113-157 (229)
135 COG0178 UvrA Excinuclease ATPa 61.0 6.5 0.00014 43.5 2.8 37 247-283 731-772 (935)
136 PRK04023 DNA polymerase II lar 60.4 3.2 7E-05 46.5 0.4 64 212-288 609-673 (1121)
137 PF07709 SRR: Seven Residue Re 56.4 5.9 0.00013 20.3 0.8 13 124-136 2-14 (14)
138 COG1198 PriA Primosomal protei 55.8 7.4 0.00016 42.9 2.2 51 228-287 434-484 (730)
139 PF03833 PolC_DP2: DNA polymer 54.5 4.1 8.9E-05 44.9 0.0 54 229-294 655-708 (900)
140 PRK03564 formate dehydrogenase 53.1 12 0.00027 36.9 3.0 42 228-273 186-235 (309)
141 PF10041 DUF2277: Uncharacteri 51.7 82 0.0018 24.4 6.6 52 85-137 6-61 (78)
142 PF08792 A2L_zn_ribbon: A2L zi 49.1 10 0.00022 24.4 1.2 23 230-252 4-27 (33)
143 PF03367 zf-ZPR1: ZPR1 zinc-fi 47.4 10 0.00022 33.8 1.3 28 248-275 3-41 (161)
144 PRK05978 hypothetical protein; 47.2 9.1 0.0002 33.6 1.0 8 264-271 52-59 (148)
145 COG5552 Uncharacterized conser 45.7 95 0.0021 23.9 6.1 44 83-127 4-47 (88)
146 TIGR00630 uvra excinuclease AB 45.1 8 0.00017 43.9 0.4 29 265-293 737-774 (924)
147 PF14353 CpXC: CpXC protein 45.0 18 0.00039 30.5 2.5 12 264-275 38-49 (128)
148 PRK14559 putative protein seri 44.0 11 0.00024 41.0 1.3 49 230-287 2-50 (645)
149 PF04246 RseC_MucC: Positive r 43.7 24 0.00052 30.1 3.1 23 293-315 41-63 (135)
150 cd01491 Ube1_repeat1 Ubiquitin 42.0 54 0.0012 32.0 5.6 59 301-363 186-254 (286)
151 PF07092 DUF1356: Protein of u 41.6 13 0.00028 35.2 1.1 12 247-258 39-50 (238)
152 PF09538 FYDLN_acid: Protein o 41.4 16 0.00034 30.4 1.5 27 227-253 7-33 (108)
153 PRK14873 primosome assembly pr 40.8 19 0.00041 39.4 2.4 49 229-287 383-431 (665)
154 PF07295 DUF1451: Protein of u 40.8 28 0.0006 30.5 3.0 31 246-276 112-142 (146)
155 COG0178 UvrA Excinuclease ATPa 39.1 14 0.00031 41.0 1.1 35 223-257 723-764 (935)
156 TIGR00595 priA primosomal prot 37.6 23 0.00049 37.5 2.4 51 228-287 212-262 (505)
157 PRK00564 hypA hydrogenase nick 37.0 40 0.00086 28.3 3.3 31 226-256 68-98 (117)
158 PRK12380 hydrogenase nickel in 36.1 29 0.00063 28.9 2.3 37 219-256 59-96 (113)
159 PF07092 DUF1356: Protein of u 34.9 16 0.00034 34.6 0.6 12 229-240 38-49 (238)
160 PRK12336 translation initiatio 33.8 83 0.0018 29.0 5.2 13 227-239 96-108 (201)
161 TIGR02300 FYDLN_acid conserved 32.2 28 0.0006 29.7 1.6 30 226-255 6-35 (129)
162 PRK00349 uvrA excinuclease ABC 31.7 27 0.00058 39.9 1.8 30 265-294 739-777 (943)
163 PRK00635 excinuclease ABC subu 31.0 23 0.00051 43.0 1.3 35 223-257 1600-1641(1809)
164 PF03589 Antiterm: Antitermina 30.3 18 0.0004 29.2 0.2 13 264-276 32-44 (95)
165 PF12434 Malate_DH: Malate deh 30.1 57 0.0012 20.0 2.2 16 96-111 10-25 (28)
166 PRK05580 primosome assembly pr 29.4 31 0.00066 37.9 1.8 50 229-287 381-430 (679)
167 TIGR00100 hypA hydrogenase nic 29.0 44 0.00096 27.9 2.3 29 227-256 68-96 (115)
168 PRK11032 hypothetical protein; 29.0 54 0.0012 29.2 2.9 32 246-277 124-155 (160)
169 PF04216 FdhE: Protein involve 28.5 24 0.00052 34.3 0.7 42 229-274 172-221 (290)
170 PF13719 zinc_ribbon_5: zinc-r 28.3 28 0.00061 22.8 0.8 10 230-239 3-12 (37)
171 PRK05467 Fe(II)-dependent oxyg 27.7 86 0.0019 29.5 4.2 40 348-387 116-155 (226)
172 PF01155 HypA: Hydrogenase exp 27.4 28 0.0006 29.0 0.8 29 227-256 68-96 (113)
173 TIGR01562 FdhE formate dehydro 26.9 50 0.0011 32.6 2.6 41 229-273 184-233 (305)
174 PRK00488 pheS phenylalanyl-tRN 25.5 17 0.00037 36.3 -0.9 21 229-258 260-280 (339)
175 PRK03681 hypA hydrogenase nick 25.5 59 0.0013 27.1 2.4 11 227-237 68-78 (114)
176 PF08274 PhnA_Zn_Ribbon: PhnA 25.1 31 0.00068 21.7 0.5 22 231-252 4-25 (30)
177 COG1545 Predicted nucleic-acid 24.7 2.4E+02 0.0052 24.3 6.2 12 263-274 42-53 (140)
178 cd01388 SOX-TCF_HMG-box SOX-TC 23.2 1.3E+02 0.0029 22.3 3.9 42 101-147 14-55 (72)
179 COG5349 Uncharacterized protei 22.9 27 0.00058 29.5 -0.1 10 248-258 23-32 (126)
180 PF09862 DUF2089: Protein of u 22.1 52 0.0011 27.5 1.4 20 267-286 1-20 (113)
181 PRK10862 SoxR reducing system 21.2 95 0.0021 27.3 3.0 22 293-314 48-69 (154)
182 PF09297 zf-NADH-PPase: NADH p 20.8 75 0.0016 19.9 1.7 6 265-270 22-27 (32)
183 PF14599 zinc_ribbon_6: Zinc-r 20.6 75 0.0016 23.5 1.9 10 230-239 31-40 (61)
184 smart00276 GLECT Galectin. Gal 20.2 1.3E+02 0.0029 25.1 3.7 41 297-337 2-48 (128)
185 PRK00398 rpoP DNA-directed RNA 20.1 83 0.0018 21.4 1.9 7 265-271 22-28 (46)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-76 Score=579.20 Aligned_cols=286 Identities=44% Similarity=0.809 Sum_probs=256.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCC
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS 158 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~ 158 (403)
++.+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||||||||+||++||+||..+..+.
T Consensus 1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~g--- 77 (371)
T COG0484 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAG--- 77 (371)
T ss_pred CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccC---
Confidence 35679999999999999999999999999999999999889999999999999999999999999999987765421
Q ss_pred CCCCCCCcccCCCCcceeccccccccchhhhhhhhhccc--------cCCCCCCceEEEEEeeeccccCcceecccccee
Q 015636 159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (403)
Q Consensus 159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~--------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~ 230 (403)
+++++ .|. .|+.+|.++|+++|++. ...+|.|+.+.|+|||+||+.|+++++.+.+.+
T Consensus 78 --g~gg~-------g~~-----~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~ 143 (371)
T COG0484 78 --GFGGF-------GFG-----GFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSV 143 (371)
T ss_pred --CcCCC-------CcC-----CCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceee
Confidence 11111 111 12224567777777421 245799999999999999999999999999999
Q ss_pred ecccCCCccccCCCccccCCCccceeEEEeC------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCC
Q 015636 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (403)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~ 304 (403)
.|+.|+|+|...+....+|++|+|+|++.+. .++++|+.|+|+|++++++|.+|+|.|.+...++++|+||+|+
T Consensus 144 ~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv 223 (371)
T COG0484 144 TCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGV 223 (371)
T ss_pred ECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCC
Confidence 9999999999999999999999999987543 2488999999999999999999999999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCCC
Q 015636 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVLS 381 (403)
Q Consensus 305 ~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~~ 381 (403)
.+|++|++.|+|+++.+++++|||||+|.|++|+.|.|+|+|||++++|++.+|+||++++||||||+++|+||++-
T Consensus 224 ~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gt 300 (371)
T COG0484 224 DDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGT 300 (371)
T ss_pred ccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCC
Confidence 99999999999999988889999999999999999999999999999999999999999999999999999999953
No 2
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.9e-67 Score=525.34 Aligned_cols=303 Identities=33% Similarity=0.616 Sum_probs=252.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++|+.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.||+.||++|+.+..... +
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~---~ 78 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSS---G 78 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCC---C
Confidence 469999999999999999999999999999999997 478999999999999999999999999999865432110 0
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhccc-----cCCCCCCceEEEEEeeeccccCcceeccccceeecccC
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-----TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC 235 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-----~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C 235 (403)
..++|. +..+.|+.+.+..| +.|.++|+++|++. ...++.|++++|.|||+|+|.|+++++.+.+.+.|+.|
T Consensus 79 ~~~~~~--~~~~~~~~~~~~g~-~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C 155 (372)
T PRK14296 79 FSSNFG--DFEDLFSNMGSSGF-SSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKC 155 (372)
T ss_pred cCcCCC--cccccccccccccc-ccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCC
Confidence 000110 00011111100011 13556777777631 23468899999999999999999999999999999999
Q ss_pred CCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCC
Q 015636 236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (403)
Q Consensus 236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G 307 (403)
+|+|........+|+.|+|+|.+.+. +.+.+|+.|.|.|++++++|..|.|.|++.+.++++|.||||+++|
T Consensus 156 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G 235 (372)
T PRK14296 156 FGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPN 235 (372)
T ss_pred CCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCCCCCC
Confidence 99999888888999999999987532 2357999999999999999999999999999999999999999999
Q ss_pred CEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceee-CCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcC----CCe
Q 015636 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD-GADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIV----LSL 382 (403)
Q Consensus 308 ~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~-G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~----~~~ 382 (403)
++|+|+|+|++...++.+|||+|+|+|+||+.|+|+ |+||+++++|+|+|||+|++++|+||||+++|+||. +.+
T Consensus 236 ~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~~g~~ 315 (372)
T PRK14296 236 QQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSINSNEL 315 (372)
T ss_pred CEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccCCCcE
Confidence 999999999987667789999999999999999996 899999999999999999999999999999999986 334
Q ss_pred eeeeeeee
Q 015636 383 LLLLFYSL 390 (403)
Q Consensus 383 ~~~~~~~~ 390 (403)
+.|---++
T Consensus 316 ~ri~GkGm 323 (372)
T PRK14296 316 IIINNKGL 323 (372)
T ss_pred EEEcCCCC
Confidence 44444443
No 3
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.6e-66 Score=523.34 Aligned_cols=301 Identities=36% Similarity=0.676 Sum_probs=253.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccc-cC-
Q 015636 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE-KY- 157 (403)
Q Consensus 80 ~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~-~~- 157 (403)
+.+|||+||||+++|+.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.||+.||++|+.+.... ..
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~ 86 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR 86 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence 3579999999999999999999999999999999998888899999999999999999999999999975422110 00
Q ss_pred ---CCCCCCCCcccC--CCCcceecccccc---ccchhhhhhhhhccc-------cCCCCCCceEEEEEeeeccccCcce
Q 015636 158 ---SAGDAEGFRYAG--DAEGFRYAYQTHF---SDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTK 222 (403)
Q Consensus 158 ---~~~~~~~~~~~~--~~~~f~~~~~~~f---~~~~~~~F~~~f~~~-------~~~~g~di~~~l~ltlee~~~G~~~ 222 (403)
+.+.+++|.+.. ....|.++|+..+ ..+|.++|+.+|+++ ...+++|++++|.|||+|+|.|+++
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~ 166 (392)
T PRK14279 87 RFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTM 166 (392)
T ss_pred cccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEE
Confidence 000111221100 1122334443111 123567788777631 1347889999999999999999999
Q ss_pred eccccceeecccCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEE
Q 015636 223 HVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV 298 (403)
Q Consensus 223 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V 298 (403)
++.+.+.+.|+.|+|+|........+|+.|+|+|.+... .++.+|+.|+|+|++++++|..|.|.|++.+.++++|
T Consensus 167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~V 246 (392)
T PRK14279 167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINV 246 (392)
T ss_pred EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeEE
Confidence 999999999999999999888888999999999987543 2478999999999999999999999999999999999
Q ss_pred EeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEc
Q 015636 299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVI 378 (403)
Q Consensus 299 ~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip 378 (403)
.||||+++|++|+|+|+|++.+++..+|||||+|+|+||+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||
T Consensus 247 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip 326 (392)
T PRK14279 247 RIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVP 326 (392)
T ss_pred EeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEEC
Confidence 99999999999999999999876777899999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 015636 379 VL 380 (403)
Q Consensus 379 ~~ 380 (403)
++
T Consensus 327 ~g 328 (392)
T PRK14279 327 AG 328 (392)
T ss_pred CC
Confidence 64
No 4
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.6e-66 Score=519.81 Aligned_cols=291 Identities=32% Similarity=0.621 Sum_probs=247.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||+||+||.+|++||++|..+.... ..
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~---~~ 78 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA---GA 78 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccC---CC
Confidence 469999999999999999999999999999999998778899999999999999999999999999986543210 00
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhccc-------cCCCCCCceEEEEEeeeccccCcceeccccceeecc
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~ 233 (403)
. ...|.++|. .|.++|+++|+.+ ...+++|+++.|.|||+|+|.|+++++.+.+.+.|+
T Consensus 79 ~---------~~~~~~~f~-----~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~ 144 (369)
T PRK14288 79 S---------QSDFSDFFE-----DLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCE 144 (369)
T ss_pred C---------ccccccchh-----hHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCC
Confidence 0 011222221 2344555555421 124689999999999999999999999999999999
Q ss_pred cCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCCCE
Q 015636 234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (403)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~ 309 (403)
.|+|+|.... ...+|+.|+|+|.+.+. .++.+|+.|.|+|+++.++|..|.|.|++.+.++++|.||||+++|++
T Consensus 145 ~C~G~G~~~~-~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~ 223 (369)
T PRK14288 145 SCDGTGAKDK-ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNR 223 (369)
T ss_pred CCCCcccCCC-CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCE
Confidence 9999998765 57899999999987543 246799999999999999999999999999999999999999999999
Q ss_pred EEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCc-EEEEEcC----CCeee
Q 015636 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKVIV----LSLLL 384 (403)
Q Consensus 310 i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~----~~~~~ 384 (403)
|+|+|+|++.. ++.+|||+|+|+|++|+.|+|+|+||+++++|+|.|||+|++++|+||||+ ++|+||+ +.++.
T Consensus 224 i~l~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~ 302 (369)
T PRK14288 224 MVLKNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFA 302 (369)
T ss_pred EEEccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEE
Confidence 99999999865 567999999999999999999999999999999999999999999999997 7999986 23444
Q ss_pred eeeeee
Q 015636 385 LLFYSL 390 (403)
Q Consensus 385 ~~~~~~ 390 (403)
|.--++
T Consensus 303 i~g~G~ 308 (369)
T PRK14288 303 FRNEGV 308 (369)
T ss_pred EcCCCC
Confidence 444443
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.8e-65 Score=512.77 Aligned_cols=287 Identities=33% Similarity=0.680 Sum_probs=247.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++|+.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||++|+.+..... +..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~-~~~ 81 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGA-GGF 81 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcccc-CCC
Confidence 4699999999999999999999999999999999987788999999999999999999999999999876533110 000
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhccc-----------cCCCCCCceEEEEEeeeccccCcceeccccce
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-----------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF 229 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-----------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~ 229 (403)
..+++ ..|..+| +.|.++|+++|++. ...++.|++++|.|||+|+|.|+++++.+.+.
T Consensus 82 ~~~~~------~~~~~~~-----~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~ 150 (372)
T PRK14286 82 GQGAY------TDFSDIF-----GDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRL 150 (372)
T ss_pred CCCCc------ccccccc-----cchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeecc
Confidence 00000 0111111 13456666666521 12468899999999999999999999999999
Q ss_pred eecccCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCC
Q 015636 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (403)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (403)
+.|+.|+|+|........+|+.|+|+|.+... +++.+|+.|.|+|++++++|..|+|.|++.+.++++|.||||++
T Consensus 151 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~ 230 (372)
T PRK14286 151 ESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVE 230 (372)
T ss_pred ccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCC
Confidence 99999999999888888999999999987543 24779999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCc-EEEEEcC
Q 015636 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKVIV 379 (403)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~ 379 (403)
+|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.|||+|++++|+||||+ ++|+||.
T Consensus 231 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~ 305 (372)
T PRK14286 231 TGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPE 305 (372)
T ss_pred CCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCC
Confidence 9999999999999876667899999999999999999999999999999999999999999999997 8999997
No 6
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6e-65 Score=507.75 Aligned_cols=288 Identities=38% Similarity=0.699 Sum_probs=249.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||++|+.+.... .
T Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~----~ 77 (365)
T PRK14285 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG----G 77 (365)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccC----C
Confidence 369999999999999999999999999999999998888899999999999999999999999999987653211 0
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhccc-------cCCCCCCceEEEEEeeeccccCcceeccccceeecc
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~ 233 (403)
+++++. ++.++|... | ..|.++|+++|++. ...++.|++++|.|||+|+|.|+++++.+.+.+.|+
T Consensus 78 ~~~~~~--~g~~~~~~~----~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~ 150 (365)
T PRK14285 78 GFEGFS--GGFSGFSDI----F-EDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCE 150 (365)
T ss_pred CccccC--CCccccccc----c-ccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCC
Confidence 001110 000111111 1 13557777777631 134788999999999999999999999999999999
Q ss_pred cCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCCCE
Q 015636 234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (403)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~ 309 (403)
.|+|+|........+|+.|+|+|++... +++.+|+.|.|.|+++.++|..|.|.|++.+.++++|.||||+++|++
T Consensus 151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~ 230 (365)
T PRK14285 151 SCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQ 230 (365)
T ss_pred CCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCE
Confidence 9999999888888999999999987643 357899999999999999999999999999999999999999999999
Q ss_pred EEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCc-EEEEEcC
Q 015636 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKVIV 379 (403)
Q Consensus 310 i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~ 379 (403)
|+|+|+|++..++..+|||||+|++++|+.|+|+|+||+++++|+|.|||+|++++|+||||+ ++|+||.
T Consensus 231 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~ 301 (365)
T PRK14285 231 IKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPK 301 (365)
T ss_pred EEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCC
Confidence 999999999876677899999999999999999999999999999999999999999999995 7899987
No 7
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-64 Score=506.72 Aligned_cols=291 Identities=36% Similarity=0.674 Sum_probs=246.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~ 159 (403)
..|||+||||+++||.+|||+|||+||++||||+|+++ ++|+++|++|++||+||+||.+|+.||++|..+......+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 46999999999999999999999999999999999864 67899999999999999999999999999865533110000
Q ss_pred CCCCCCcccCCCCcceeccccccccch-hhhhhhhhccc--------cCCCCCCceEEEEEeeeccccCcceecccccee
Q 015636 160 GDAEGFRYAGDAEGFRYAYQTHFSDSF-HKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (403)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~~-~~~F~~~f~~~--------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~ 230 (403)
...++| |.++|.. |.+.| .++|+++|++. ...+++|+++.|.|||+|+|+|+++++.+.+.+
T Consensus 83 ~~~g~~--------~~~~~~~-~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~ 153 (369)
T PRK14282 83 ESGGGF--------FEDIFKD-FENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYE 153 (369)
T ss_pred CCCCcc--------ccccccc-ccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecc
Confidence 000111 1111111 11111 24566666531 134688999999999999999999999999999
Q ss_pred ecccCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCC
Q 015636 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA 302 (403)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~ 302 (403)
.|+.|+|+|........+|+.|+|+|.+... ..+.+|+.|.|.|++++++|..|.|.|++.+.++++|.|||
T Consensus 154 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~ 233 (369)
T PRK14282 154 TCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA 233 (369)
T ss_pred cCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCC
Confidence 9999999999888888999999999987532 13679999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCc-EEEEEcCC
Q 015636 303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKVIVL 380 (403)
Q Consensus 303 G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~~ 380 (403)
|+++|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.||++|++++|+|+||+ ++|+||++
T Consensus 234 G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g 312 (369)
T PRK14282 234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPG 312 (369)
T ss_pred CCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCC
Confidence 9999999999999998776778999999999999999999999999999999999999999999999996 79999964
No 8
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-64 Score=509.08 Aligned_cols=295 Identities=40% Similarity=0.771 Sum_probs=245.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++|+.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||++|..+......+.+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 46999999999999999999999999999999999987889999999999999999999999999998765432111110
Q ss_pred CC--CCCcccCCCCcceeccccccccchhhhhhhhhccc------cCCCCCCceEEEEEeeeccccCcceeccccceeec
Q 015636 161 DA--EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (403)
Q Consensus 161 ~~--~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C 232 (403)
+. +++. ...|...+ ..|.+.|.++|+.+|++. ...+++|+++.|.|||+|+|.|+++++.+.+.+.|
T Consensus 84 ~~~~~g~~----~~~~~~~~-~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C 158 (386)
T PRK14277 84 GFGQGGFG----GGGFDFDF-GGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKC 158 (386)
T ss_pred CcCCCCcc----ccCccccc-cchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccC
Confidence 00 1110 00010000 111122333343333321 13468899999999999999999999999999999
Q ss_pred ccCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCC
Q 015636 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (403)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~ 304 (403)
+.|+|+|........+|+.|+|+|.+... ....+|+.|.|+|++++++|..|+|.|++.+.+.++|.||||+
T Consensus 159 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~ 238 (386)
T PRK14277 159 DVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGI 238 (386)
T ss_pred CCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCc
Confidence 99999999888888999999999987532 1256999999999999999999999999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 305 ~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
++|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.|||+|+++.|+||||+++|+||+.
T Consensus 239 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g 314 (386)
T PRK14277 239 DDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEG 314 (386)
T ss_pred cCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCC
Confidence 9999999999999876666789999999999999999999999999999999999999999999999999999963
No 9
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-64 Score=510.34 Aligned_cols=296 Identities=35% Similarity=0.671 Sum_probs=247.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCCC
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~~ 161 (403)
.|||+||||+++||.+|||+|||+||++||||+|++++.|+++|++|++||+||+||.+|+.||++|..+..... +...
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~-~~~~ 79 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGA-GGFG 79 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccccccccc-CCcC
Confidence 389999999999999999999999999999999998888999999999999999999999999999876532110 0000
Q ss_pred CCCCcc-cCCCCcceeccccccccchhhhhhhhhcc-----------ccCCCCCCceEEEEEeeeccccCcceeccccce
Q 015636 162 AEGFRY-AGDAEGFRYAYQTHFSDSFHKIFSEIFED-----------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF 229 (403)
Q Consensus 162 ~~~~~~-~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-----------~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~ 229 (403)
.++|.. .+....|..+|+..|+ .+.++|+++|++ ....++.|+++.|.|||||+|.|+++++.+.+.
T Consensus 80 ~~g~~~~~~~~~~~~~~f~~~~~-~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~ 158 (391)
T PRK14284 80 GAGMGNMEDALRTFMGAFGGEFG-GGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGY 158 (391)
T ss_pred CCCcCcccchhhhcccccccccc-ccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeee
Confidence 011110 0011122222221111 113556555542 112468899999999999999999999999999
Q ss_pred eecccCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCC
Q 015636 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (403)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (403)
+.|+.|+|+|........+|+.|+|+|.+... +++.+|+.|+|.|+++.++|..|.|.|++.+.++++|.||||++
T Consensus 159 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 238 (391)
T PRK14284 159 KSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVD 238 (391)
T ss_pred ccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCCC
Confidence 99999999999888888999999999987533 24779999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCC--CcEEEEEcC
Q 015636 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS--GKVQVKVIV 379 (403)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tld--G~~~l~ip~ 379 (403)
+|++|+|+|+|++...++.+|||||+|+++||+.|+|+|+||+++++|+|.|||+|++++|+||| +.++|+||.
T Consensus 239 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~ 314 (391)
T PRK14284 239 SGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPE 314 (391)
T ss_pred CCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECC
Confidence 99999999999998777889999999999999999999999999999999999999999999999 678899986
No 10
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.6e-65 Score=507.97 Aligned_cols=282 Identities=41% Similarity=0.742 Sum_probs=245.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++|+.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|..+.... ++
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~-~~-- 79 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQ-YS-- 79 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccc-cC--
Confidence 369999999999999999999999999999999997 47788999999999999999999999999986543211 00
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhccc------cCCCCCCceEEEEEeeeccccCcceeccccceeeccc
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~ 234 (403)
..++|. . .. | ++|.++|+++|++. ...++.|++++|.|||+|+|.|+++++.+.+.+.|+.
T Consensus 80 ~~~~~~---~-~~--------~-~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~ 146 (377)
T PRK14298 80 AEDIFR---G-AD--------F-GGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCST 146 (377)
T ss_pred cccccc---c-CC--------c-CcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCC
Confidence 000010 0 00 1 12345666666531 2357899999999999999999999999999999999
Q ss_pred CCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCC
Q 015636 235 CHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306 (403)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~ 306 (403)
|+|+|...+....+|+.|+|+|.+... +++.+|+.|.|.|+++.++|..|.|.|++.+.++++|.||||+++
T Consensus 147 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~ 226 (377)
T PRK14298 147 CSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADS 226 (377)
T ss_pred CCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCC
Confidence 999999988888999999999987432 247899999999999999999999999999999999999999999
Q ss_pred CCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcC
Q 015636 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIV 379 (403)
Q Consensus 307 G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~ 379 (403)
|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||+
T Consensus 227 G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~ 299 (377)
T PRK14298 227 GLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPP 299 (377)
T ss_pred CCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCC
Confidence 9999999999997667789999999999999999999999999999999999999999999999999999996
No 11
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.3e-64 Score=507.17 Aligned_cols=299 Identities=36% Similarity=0.700 Sum_probs=250.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhh----ccccCCccc
Q 015636 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDR----RRSRGSENE 155 (403)
Q Consensus 80 ~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~----~~~~g~~~~ 155 (403)
+..|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||+ +|+.|....
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~ 86 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG 86 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence 3579999999999999999999999999999999998778899999999999999999999999999 776543211
Q ss_pred cCCCCCCCCCcccCCCCcceeccc----cccccchhhhhhhhhcc----ccCCCCCCceEEEEEeeeccccCcceecccc
Q 015636 156 KYSAGDAEGFRYAGDAEGFRYAYQ----THFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFD 227 (403)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~~~~----~~f~~~~~~~F~~~f~~----~~~~~g~di~~~l~ltlee~~~G~~~~v~~~ 227 (403)
. +.+..++|.+ +..+.|..+++ ..|++.|.++|+.+|++ ....+++|++++|.|||||+|.|+++++.+.
T Consensus 87 ~-~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~ 164 (389)
T PRK14295 87 P-GGGGGGGFNF-DLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLT 164 (389)
T ss_pred C-CCCCCCCCCc-ccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEee
Confidence 0 0000111211 01111211100 01222355667766653 1235789999999999999999999999999
Q ss_pred ceeecccCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCC
Q 015636 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G 303 (403)
+.+.|+.|+|+|........+|+.|+|+|.+... .++.+|+.|.|+|++++++|..|.|.|++.+.++++|.||+|
T Consensus 165 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G 244 (389)
T PRK14295 165 SQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAG 244 (389)
T ss_pred ccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCCC
Confidence 9999999999999988888999999999987543 247799999999999999999999999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCC-cEEEEEcCC
Q 015636 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKVIVL 380 (403)
Q Consensus 304 ~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG-~~~l~ip~~ 380 (403)
+++|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.|||+|++++|+|||| .++|+||++
T Consensus 245 ~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g 322 (389)
T PRK14295 245 VSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPG 322 (389)
T ss_pred CCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCc
Confidence 99999999999999877677889999999999999999999999999999999999999999999999 589999973
No 12
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.4e-64 Score=503.35 Aligned_cols=280 Identities=39% Similarity=0.752 Sum_probs=243.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||++|||+++|+.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|+.+.... .+.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~-~~~- 79 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQG-FGG- 79 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccc-cCC-
Confidence 469999999999999999999999999999999997 47789999999999999999999999999986553210 000
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhccc-------cCCCCCCceEEEEEeeeccccCcceeccccceeecc
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~ 233 (403)
+++ ..| + +|.++|+++|++. ...++.|++++|.|||+|+|.|+++++.+.+.+.|+
T Consensus 80 --~~~------~~f--------~-~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~ 142 (371)
T PRK14287 80 --GGA------GDF--------G-GFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCG 142 (371)
T ss_pred --CCC------ccc--------c-chHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCC
Confidence 000 011 1 1345566666521 134789999999999999999999999999999999
Q ss_pred cCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCC
Q 015636 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (403)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (403)
.|+|+|........+|+.|+|+|.+.+. ..+.+|+.|.|+|++++.+|..|.|.|++.+.++++|.||||++
T Consensus 143 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 222 (371)
T PRK14287 143 TCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGID 222 (371)
T ss_pred CCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCC
Confidence 9999999887778899999999987532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||++++.|+|.|||+|++++|+||||+++|+||++
T Consensus 223 ~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g 297 (371)
T PRK14287 223 HGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAG 297 (371)
T ss_pred CCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCC
Confidence 999999999999976666889999999999999999999999999999999999999999999999999999963
No 13
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-64 Score=503.48 Aligned_cols=284 Identities=40% Similarity=0.742 Sum_probs=247.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|+.|....
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~----- 77 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT----- 77 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCC-----
Confidence 469999999999999999999999999999999998878899999999999999999999999999987654211
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhc-c-c-------cCCCCCCceEEEEEeeeccccCcceeccccceee
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE-D-E-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~-~-~-------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~ 231 (403)
.++++ ..|.++| +.|.++|+++|+ + . ...+++|++++|.|||+|+|.|+++++.+.+.+.
T Consensus 78 ~~~~~------~~~~~~~-----~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~ 146 (366)
T PRK14294 78 GFSGF------SGFDDIF-----SSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLET 146 (366)
T ss_pred CCCCc------Cccccch-----hhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeeccc
Confidence 01111 0121111 123455666665 1 1 1246889999999999999999999999999999
Q ss_pred cccCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCC
Q 015636 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (403)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G 307 (403)
|+.|+|+|........+|+.|+|.|.+... +++.+|+.|.|.|+++.+.|..|.|.|++.+.+.++|.||||+++|
T Consensus 147 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G 226 (366)
T PRK14294 147 CEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTG 226 (366)
T ss_pred CCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCC
Confidence 999999999888888999999999987532 3578999999999999999999999999999999999999999999
Q ss_pred CEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 308 ~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
++|+|+|+|++...++.+|||||+|+++||+.|+|+|+||++++.|+|.|||+|++++|+||||+++|+||.+
T Consensus 227 ~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g 299 (366)
T PRK14294 227 SRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKG 299 (366)
T ss_pred cEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCC
Confidence 9999999999877677899999999999999999999999999999999999999999999999999999963
No 14
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.9e-64 Score=503.94 Aligned_cols=288 Identities=40% Similarity=0.729 Sum_probs=246.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||+||+||.+|+.||++|+.+..... +..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~-~~~ 80 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGF-GGG 80 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCC-CCC
Confidence 4699999999999999999999999999999999984 77899999999999999999999999999876543210 000
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhccc-------cCCCCCCceEEEEEeeeccccCcceeccccceeecc
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~ 233 (403)
.+++ .+|.. ...| +.|.++|+++|++. ...++.|+.+.|.|||+|+|.|+++++.+.+.+.|+
T Consensus 81 -~~~~------~~~~~--~~~~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~ 150 (380)
T PRK14276 81 -AGGF------GGFDG--SGGF-GGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCH 150 (380)
T ss_pred -CCCC------CCccc--cccc-cchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCC
Confidence 0000 01100 0011 12456777777631 134688999999999999999999999999999999
Q ss_pred cCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCC
Q 015636 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (403)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (403)
.|+|+|........+|+.|+|+|.+.+. ..+.+|+.|.|.|++++++|..|.|.|++.+.++++|.||||++
T Consensus 151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~ 230 (380)
T PRK14276 151 TCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVE 230 (380)
T ss_pred CCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCcc
Confidence 9999999888888899999999987532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+|++|+|+|+|++...+..+|||+|+|+|+||+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||++
T Consensus 231 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g 305 (380)
T PRK14276 231 TGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAG 305 (380)
T ss_pred CCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCC
Confidence 999999999999976666789999999999999999999999999999999999999999999999999999963
No 15
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.8e-64 Score=503.33 Aligned_cols=285 Identities=42% Similarity=0.766 Sum_probs=247.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|..|.... +
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~----~ 78 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGN----G 78 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccC----C
Confidence 469999999999999999999999999999999998878899999999999999999999999999987653211 1
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhcc--------ccCCCCCCceEEEEEeeeccccCcceeccccceeec
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~--------~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C 232 (403)
.+++|. +..++| +.|.++|+++|+. ....++.|+++.|.|||+|+|.|+++++.+.+.+.|
T Consensus 79 ~~~g~~--~~~~~~---------~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C 147 (373)
T PRK14301 79 GFGGFS--SAEDIF---------SHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTC 147 (373)
T ss_pred CCCCcc--cccccc---------cchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccC
Confidence 111121 011111 1234556655541 113478899999999999999999999999999999
Q ss_pred ccCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCCC
Q 015636 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (403)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~ 308 (403)
+.|+|+|........+|+.|+|+|.+... +++.+|+.|+|.|+++.+.|..|+|.|++.+.++++|.||||+++|+
T Consensus 148 ~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~ 227 (373)
T PRK14301 148 DDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGS 227 (373)
T ss_pred CCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCC
Confidence 99999999888888899999999987543 24789999999999999999999999999999999999999999999
Q ss_pred EEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 309 ~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||..
T Consensus 228 ~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g 299 (373)
T PRK14301 228 RLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKG 299 (373)
T ss_pred EEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCC
Confidence 999999999877667799999999999999999999999999999999999999999999999999999973
No 16
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.5e-64 Score=502.42 Aligned_cols=285 Identities=42% Similarity=0.759 Sum_probs=245.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++|+.+|||+|||+||++||||+|++ +.|+++|++|++||+||+||.+|+.||++|+.+..... +
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~-~-- 78 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGF-G-- 78 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCc-C--
Confidence 3699999999999999999999999999999999974 67899999999999999999999999999866533110 0
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhccc-------cCCCCCCceEEEEEeeeccccCcceeccccceeecc
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~ 233 (403)
..++. +..|.. .| +|.++|+++|++. ...++.|+.++|.|||+|+|.|+++++.+.+.+.|+
T Consensus 79 -~~~~~----~~~~~~----~~--~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~ 147 (376)
T PRK14280 79 -GGGFG----GGDFGG----GF--GFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCD 147 (376)
T ss_pred -CCCCC----CCCccc----cc--cchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCC
Confidence 00000 001110 01 2345666666521 124788999999999999999999999999999999
Q ss_pred cCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCC
Q 015636 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (403)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (403)
.|+|+|........+|+.|+|+|.+... .++.+|+.|.|+|+++..+|..|.|.|++.+.++++|.||+|++
T Consensus 148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~ 227 (376)
T PRK14280 148 TCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVD 227 (376)
T ss_pred CCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCc
Confidence 9999999888888999999999987532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||+.
T Consensus 228 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g 302 (376)
T PRK14280 228 NGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAG 302 (376)
T ss_pred CCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCC
Confidence 999999999999977667889999999999999999999999999999999999999999999999999999963
No 17
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.1e-64 Score=501.31 Aligned_cols=285 Identities=45% Similarity=0.843 Sum_probs=247.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++|+.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||++|..+..... +
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~-- 79 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG-G-- 79 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCC-C--
Confidence 4699999999999999999999999999999999987788999999999999999999999999999765532110 0
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhcc------ccCCCCCCceEEEEEeeeccccCcceeccccceeeccc
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~------~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~ 234 (403)
.+++. +..+ |++.|.++|+.+|++ ....++.|++++|.|||||+|.|+++++.+.+.+.|+.
T Consensus 80 -~~~~~---~~~~--------~~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~ 147 (371)
T PRK10767 80 -GGGFG---GGGG--------FGDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDT 147 (371)
T ss_pred -CCCCC---Cccc--------cccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCC
Confidence 01110 0001 122244556665642 12357899999999999999999999999999999999
Q ss_pred CCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCCCEE
Q 015636 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (403)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i 310 (403)
|+|+|.........|+.|+|+|.+... +++.+|+.|.|.|+++.++|..|.|.|++.+.+.++|.||||+++|++|
T Consensus 148 C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i 227 (371)
T PRK10767 148 CHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRI 227 (371)
T ss_pred CCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEE
Confidence 999999888888899999999987532 2477999999999999999999999999999999999999999999999
Q ss_pred EEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 311 ~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+|+|+|++..++..+|||||+|+++||+.|+|+|+||++++.|+|.|||+|++++|+||||.++|+||++
T Consensus 228 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g 297 (371)
T PRK10767 228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEG 297 (371)
T ss_pred EEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCC
Confidence 9999999876667899999999999999999999999999999999999999999999999999999963
No 18
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9e-64 Score=502.35 Aligned_cols=288 Identities=39% Similarity=0.732 Sum_probs=247.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++|+.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||++|+.+..... ..
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~--~~ 80 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG--GF 80 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC--CC
Confidence 3699999999999999999999999999999999988788999999999999999999999999999876532110 00
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhccc---------cCCCCCCceEEEEEeeeccccCcceeccccceee
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE---------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~---------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~ 231 (403)
+.++|. .|. + ..+ .+|.++|+++|++. ...+++|++++|.|||+|+|.|+++++.+.+.+.
T Consensus 81 ~~~~~~------~~~--~-~~~-~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~ 150 (380)
T PRK14297 81 GSGGFG------GFD--F-SDM-GGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNEN 150 (380)
T ss_pred CCCCCC------CcC--c-ccc-cchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeecc
Confidence 001110 010 0 001 12456666666521 1246889999999999999999999999999999
Q ss_pred cccCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCC
Q 015636 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (403)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G 303 (403)
|+.|+|+|...+....+|+.|+|+|.+... .++.+|+.|+|+|.++..+|..|+|.|++.+.++++|.||||
T Consensus 151 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G 230 (380)
T PRK14297 151 CETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAG 230 (380)
T ss_pred CCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCC
Confidence 999999999888888999999999987532 247799999999999999999999999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 304 ~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+++|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||+.
T Consensus 231 ~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g 307 (380)
T PRK14297 231 VDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAG 307 (380)
T ss_pred CCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCC
Confidence 99999999999999876667789999999999999999999999999999999999999999999999999999964
No 19
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-63 Score=500.48 Aligned_cols=279 Identities=37% Similarity=0.671 Sum_probs=242.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCCC
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~~ 161 (403)
.|||+||||+++|+.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|..+... + ..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~---~-~~ 77 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESA---G-GG 77 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccc---c-CC
Confidence 69999999999999999999999999999999998 5789999999999999999999999999997542110 0 00
Q ss_pred CCCCcccCCCCcceeccccccccchhhhhhhhhccc--------cCCCCCCceEEEEEeeeccccCcceeccccceeecc
Q 015636 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (403)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~--------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~ 233 (403)
.++|. ..| ++|.++|+++|++. ...++.|+++.|.|||+|+|.|+++++.+.+.+.|+
T Consensus 78 ~~g~~-----~~f---------~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~ 143 (378)
T PRK14278 78 GGGFG-----GGF---------GGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCD 143 (378)
T ss_pred CCCCC-----cCc---------CchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCC
Confidence 01110 011 12345666666521 124688999999999999999999999999999999
Q ss_pred cCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCC
Q 015636 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (403)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (403)
.|+|+|........+|+.|+|+|.+... ..+.+|+.|+|.|+++.++|..|.|.|++.+.++++|.||||++
T Consensus 144 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~ 223 (378)
T PRK14278 144 RCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVG 223 (378)
T ss_pred CCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCC
Confidence 9999999888888999999999986432 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCC-CCcEEEEEcC
Q 015636 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL-SGKVQVKVIV 379 (403)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tl-dG~~~l~ip~ 379 (403)
+|++|+|+|+|++.+.+..+|||||+|+++||+.|+|+|+||+++++|+|.|||+|++++|+|| +|.++|+||+
T Consensus 224 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~ 298 (378)
T PRK14278 224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPP 298 (378)
T ss_pred CCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCC
Confidence 9999999999998876677899999999999999999999999999999999999999999999 5668999996
No 20
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=7e-64 Score=505.86 Aligned_cols=285 Identities=28% Similarity=0.469 Sum_probs=241.6
Q ss_pred CCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCcc
Q 015636 75 GSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSEN 154 (403)
Q Consensus 75 ~~~~~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~ 154 (403)
.+..+...|||+||||+++||.+|||+|||+||++||||+|++ .++|++|++||+||+||.+|+.||++|..+...
T Consensus 21 ~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~ 96 (421)
T PTZ00037 21 RKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEG 96 (421)
T ss_pred ccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhccc
Confidence 3444556899999999999999999999999999999999863 489999999999999999999999997654321
Q ss_pred ccCCCCCCCCCcccCCCCcceeccccccccchhhhhhhhhcc----ccCCCCCCceEEEEEeeeccccCcceecccccee
Q 015636 155 EKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (403)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~----~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~ 230 (403)
. . +. . .+.++|+.+|++ ....+|.|+.+.|.|||+|+|.|+++++.+.+.+
T Consensus 97 ~---------~---~~-~------------d~~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~ 151 (421)
T PTZ00037 97 G---------E---QP-A------------DASDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDV 151 (421)
T ss_pred C---------C---CC-c------------chhhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccc
Confidence 0 0 00 0 122344444542 1235689999999999999999999999999999
Q ss_pred ecccCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEee--eeeeEEeeceEEeceEEEEEEe
Q 015636 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTI 300 (403)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~l~V~I 300 (403)
.|+.|+|+|.... ...+|+.|+|+|.+... +++.+|+.|+|+|+++. ++|..|.|.|++.+.+.++|.|
T Consensus 152 ~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~I 230 (421)
T PTZ00037 152 ICANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNI 230 (421)
T ss_pred cccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEee
Confidence 9999999997544 57899999999975321 24679999999999985 8999999999999999999999
Q ss_pred CCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCc-EEEEEcC
Q 015636 301 PAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKVIV 379 (403)
Q Consensus 301 p~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~ 379 (403)
|||+++|++|+|+|+|++.+ ++.+|||||+|+++||+.|+|+|+||+++++|+|.|||+|++++|+||||+ +.|+||+
T Consensus 231 p~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~ 309 (421)
T PTZ00037 231 DKGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPP 309 (421)
T ss_pred CCCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCC
Confidence 99999999999999999865 578999999999999999999999999999999999999999999999997 7899886
Q ss_pred C------Ceeeeeeeee
Q 015636 380 L------SLLLLLFYSL 390 (403)
Q Consensus 380 ~------~~~~~~~~~~ 390 (403)
+ .++.|..-++
T Consensus 310 g~vt~pg~~~~I~geGm 326 (421)
T PTZ00037 310 GEVVKPGDIKVINNEGM 326 (421)
T ss_pred CcccCCCcEEEeCCCCc
Confidence 4 3455554444
No 21
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.5e-63 Score=496.95 Aligned_cols=298 Identities=36% Similarity=0.655 Sum_probs=241.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||++|..+....... .
T Consensus 2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~-~ 80 (397)
T PRK14281 2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAAS-G 80 (397)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhcccccc-C
Confidence 369999999999999999999999999999999998878899999999999999999999999999987654321000 0
Q ss_pred CCCCCccc--CCCCcc---eeccccc--cccchhhhhhhhhccc-------cCCCCCCceEEEEEeeeccccCcceeccc
Q 015636 161 DAEGFRYA--GDAEGF---RYAYQTH--FSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSF 226 (403)
Q Consensus 161 ~~~~~~~~--~~~~~f---~~~~~~~--f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~ltlee~~~G~~~~v~~ 226 (403)
...+|... +..+.| ..||+.. ++.....-|...|++. ...++.|+++.|.|||||+|.|+++++.+
T Consensus 81 ~~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~ 160 (397)
T PRK14281 81 GGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKI 160 (397)
T ss_pred CCCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEE
Confidence 00111000 001111 1222210 0000000011111111 11368899999999999999999999999
Q ss_pred cceeecccCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEE
Q 015636 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV 298 (403)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V 298 (403)
.+.+.|+.|+|+|.... ...+|+.|+|.|.+... ..+.+|+.|.|.|++++++|..|.|.|++.+.++++|
T Consensus 161 ~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V 239 (397)
T PRK14281 161 KKQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKV 239 (397)
T ss_pred EeeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEE
Confidence 99999999999999876 57899999999987532 1367999999999999999999999999999999999
Q ss_pred EeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEc
Q 015636 299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVI 378 (403)
Q Consensus 299 ~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip 378 (403)
.||||+++|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||
T Consensus 240 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip 319 (397)
T PRK14281 240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIP 319 (397)
T ss_pred ecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeC
Confidence 99999999999999999999776678999999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 015636 379 VL 380 (403)
Q Consensus 379 ~~ 380 (403)
++
T Consensus 320 ~g 321 (397)
T PRK14281 320 AG 321 (397)
T ss_pred Cc
Confidence 63
No 22
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-62 Score=492.77 Aligned_cols=291 Identities=39% Similarity=0.725 Sum_probs=241.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||++|||+++|+.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|+.||++|..+.........
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 80 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence 3699999999999999999999999999999999985 778999999999999999999999999998755322110000
Q ss_pred CCCCCc---ccCCCCcceeccccccccchhhhhhhhhcc-----------ccCCCCCCceEEEEEeeeccccCcceeccc
Q 015636 161 DAEGFR---YAGDAEGFRYAYQTHFSDSFHKIFSEIFED-----------ETSHFAPDIQVELVLSFAEAAKGCTKHVSF 226 (403)
Q Consensus 161 ~~~~~~---~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-----------~~~~~g~di~~~l~ltlee~~~G~~~~v~~ 226 (403)
...+|. ..+..+.|.+||+. |+ |+.+|+. ....+++|+++.|.|||+|+|.|+++++.+
T Consensus 81 ~~~~~~~~~~~~~~d~f~~~f~~-fg------~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~ 153 (382)
T PRK14291 81 GQEGFSDFGGGNIEDILEDVFDI-FG------FGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEV 153 (382)
T ss_pred cccccccccCCCHHHHHHHHHHh-cc------ccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEE
Confidence 001111 00001112222110 10 0111221 112368899999999999999999999999
Q ss_pred cceeecccCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCC
Q 015636 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA 302 (403)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~ 302 (403)
.+.+.|+.|+|+|........+|+.|+|+|.+... .++.+|+.|+|.|. ++++|..|.|.|++.+.++++|.|||
T Consensus 154 ~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~g~v~~~~~l~V~Ip~ 232 (382)
T PRK14291 154 PRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-LREPCSKCNGRGLVIKKETIKVRIPP 232 (382)
T ss_pred eeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceE-EccCCCCCCCCceEEeeeEEEEEeCC
Confidence 99999999999999888888999999999987543 24789999999995 78999999999999999999999999
Q ss_pred CCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCc-EEEEEcCC
Q 015636 303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKVIVL 380 (403)
Q Consensus 303 G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~~ 380 (403)
|+++|++|+|+|+|++...++.+|||||+|+++||+.|+|+|+||+++++|+|.|||+|++++|+|+||+ ++|+||++
T Consensus 233 G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g 311 (382)
T PRK14291 233 GVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPG 311 (382)
T ss_pred CCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCc
Confidence 9999999999999998776788999999999999999999999999999999999999999999999996 78999873
No 23
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.3e-62 Score=488.63 Aligned_cols=286 Identities=36% Similarity=0.717 Sum_probs=244.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCCC
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~~ 161 (403)
.|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||++|..+...... .+.
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~-~~~ 80 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQS-RGG 80 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccc-cCC
Confidence 69999999999999999999999999999999997 4678899999999999999999999999998655321100 000
Q ss_pred CCCCcccCCCCcceeccccccccchhhhhhhhhccc-------cCCCCCCceEEEEEeeeccccCcceeccccceeeccc
Q 015636 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (403)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~ 234 (403)
.+++ ..|. ..+++.|.++|+.+|++. ...++.|+++.|.|||+|+|.|+++++.+.+.+.|+.
T Consensus 81 ~g~~------~~~~----~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~ 150 (372)
T PRK14300 81 GGNH------GGFH----PDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDT 150 (372)
T ss_pred CCCC------Cccc----cchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCC
Confidence 0000 0110 012223445555544421 1147889999999999999999999999999999999
Q ss_pred CCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCCCEE
Q 015636 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (403)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i 310 (403)
|+|+|........+|+.|+|+|.+.+. +++.+|+.|.|.|+++.++|..|+|.|++.+.+.++|.||||+++|++|
T Consensus 151 C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i 230 (372)
T PRK14300 151 CHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRI 230 (372)
T ss_pred CCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEE
Confidence 999999888888999999999987543 2467999999999999999999999999999999999999999999999
Q ss_pred EEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCC-cEEEEEcC
Q 015636 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKVIV 379 (403)
Q Consensus 311 ~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG-~~~l~ip~ 379 (403)
+++|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.+||+|+++.|+|||| .++|+||+
T Consensus 231 ~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~ 300 (372)
T PRK14300 231 RHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPA 300 (372)
T ss_pred EEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECC
Confidence 9999999876677899999999999999999999999999999999999999999999998 68999986
No 24
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=6.6e-62 Score=485.39 Aligned_cols=285 Identities=45% Similarity=0.800 Sum_probs=244.3
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCCCC
Q 015636 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDA 162 (403)
Q Consensus 83 ~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~~~ 162 (403)
|||++|||+++|+.+|||+|||+||++||||+++ +++++++|++|++||+||+||.+|+.||.+|..+......+ ..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~--~~ 77 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGG--GG 77 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcC--CC
Confidence 7999999999999999999999999999999997 57788999999999999999999999999987654321100 00
Q ss_pred CCCcccCCCCcceeccccccccchhhhhhhhhccc---------cCCCCCCceEEEEEeeeccccCcceeccccceeecc
Q 015636 163 EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE---------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (403)
Q Consensus 163 ~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~---------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~ 233 (403)
++|. +| ..+.| +.+.++|+++|++. ...+++|++++|.|||+|+|.|+++++.+.+.+.|+
T Consensus 78 ~~~~------~~---~~~~~-~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~ 147 (354)
T TIGR02349 78 GGFN------GF---DIGFF-GDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCE 147 (354)
T ss_pred CCcC------Cc---cccCc-CchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCC
Confidence 0110 00 00011 12445666666521 234788999999999999999999999999999999
Q ss_pred cCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCC
Q 015636 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (403)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (403)
.|+|+|........+|+.|+|.|.+... +.+.+|+.|.|+|++++.+|..|.|.|++.+.+.++|.||||++
T Consensus 148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 227 (354)
T TIGR02349 148 TCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVD 227 (354)
T ss_pred CCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCC
Confidence 9999999888878999999999987532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+|++|+|+|+|++...+..+|||||+|++++|+.|+|+|+||++++.|+|.|||+|++++|+||||.++|+||+.
T Consensus 228 ~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g 302 (354)
T TIGR02349 228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAG 302 (354)
T ss_pred CCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCc
Confidence 999999999999876667789999999999999999999999999999999999999999999999989999863
No 25
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.3e-61 Score=484.55 Aligned_cols=290 Identities=38% Similarity=0.674 Sum_probs=244.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||++|||+++|+.+|||+|||+||++||||+|++ ++|+++|++|++||++|+||.+|+.||++|+.|.... +..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~--~~~ 80 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF--SQE 80 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccc--ccc
Confidence 5799999999999999999999999999999999984 7899999999999999999999999999987654311 000
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhh-hcc---ccCCCCCCceEEEEEeeeccccCcceeccccceeecccCC
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-FED---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCH 236 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~-f~~---~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~ 236 (403)
+.|...+..+.|..|+ .++.++|+.+ |++ ....++.|++++|.|||+|+|.|+++++.+.+.+.|+.|+
T Consensus 81 --~~~~~~~~~~~~~~~~-----~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~ 153 (378)
T PRK14283 81 --DIFNNINFEDIFQGFG-----FGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCN 153 (378)
T ss_pred --ccccccCccccccccc-----cchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCC
Confidence 0010000011121111 1223444443 432 1235788999999999999999999999999999999999
Q ss_pred CccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCCC
Q 015636 237 GRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (403)
Q Consensus 237 G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~ 308 (403)
|+|........+|+.|+|+|.+... ..+.+|+.|.|.|+.+++.|..|.|.|++.+.+.++|.||||+++|+
T Consensus 154 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~ 233 (378)
T PRK14283 154 GSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGS 233 (378)
T ss_pred ccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCc
Confidence 9999888888999999999987532 12579999999999999999999999999999999999999999999
Q ss_pred EEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 309 ~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||++++.|+|.+|++|++++|+||||.+.|+||.+
T Consensus 234 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g 305 (378)
T PRK14283 234 RLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAG 305 (378)
T ss_pred EEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCC
Confidence 999999999976667899999999999999999999999999999999999999999999999889999863
No 26
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-61 Score=481.67 Aligned_cols=280 Identities=37% Similarity=0.672 Sum_probs=236.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
.|||+||||+++|+.+|||+|||+||++||||++++++ +|+++|++|++||++|+||.+|+.||++|+.+... +.
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~---~~- 78 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGA---GG- 78 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccccc---CC-
Confidence 59999999999999999999999999999999998765 68899999999999999999999999998764321 00
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhcc--------------ccCCCCCCceEEEEEeeeccccCcceeccc
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--------------ETSHFAPDIQVELVLSFAEAAKGCTKHVSF 226 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~--------------~~~~~g~di~~~l~ltlee~~~G~~~~v~~ 226 (403)
.++.. ..|.. | ..+.++|+.+|++ ....++.|+++.|.|||+|+|.|+++++.+
T Consensus 79 --~~~~~----~~~~~-----~-~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~ 146 (365)
T PRK14290 79 --SNFNW----DNFTH-----F-SDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKY 146 (365)
T ss_pred --CCccc----ccccc-----c-cchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEe
Confidence 01100 00000 0 0112223333221 011247899999999999999999999999
Q ss_pred cceeecccCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEE
Q 015636 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV 298 (403)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V 298 (403)
.+.+.|+.|+|+|.... ...+|+.|+|+|.+.+. +++.+|+.|.|.|++++++|..|+|.|++.+.++++|
T Consensus 147 ~r~~~C~~C~G~g~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V 225 (365)
T PRK14290 147 RRNAMCPDCSGTGAKNG-KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISV 225 (365)
T ss_pred eecccCCCCccccCCCC-CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEE
Confidence 99999999999998765 57899999999986532 1257999999999999999999999999999999999
Q ss_pred EeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEc
Q 015636 299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVI 378 (403)
Q Consensus 299 ~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip 378 (403)
.||||+.+|++|+|+|+|+. .++.+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|++++|+|++|.++|+||
T Consensus 226 ~Ip~G~~~G~~i~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip 303 (365)
T PRK14290 226 KIPKGATDNLRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIP 303 (365)
T ss_pred EECCCCCCCcEEEEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEEC
Confidence 99999999999999999986 3678999999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 015636 379 VL 380 (403)
Q Consensus 379 ~~ 380 (403)
++
T Consensus 304 ~g 305 (365)
T PRK14290 304 EG 305 (365)
T ss_pred Cc
Confidence 73
No 27
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.1e-60 Score=479.05 Aligned_cols=297 Identities=36% Similarity=0.630 Sum_probs=244.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||++|||+++|+.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||++|..+..... +.+
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~-~~~ 82 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAA-GGG 82 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCC-CCC
Confidence 4699999999999999999999999999999999998888999999999999999999999999999876532110 000
Q ss_pred CCCCCcccCCCCcceec---cccccccchhh--hhhhhhccccCCCCCCceEEEEEeeeccccCcceeccccceeecccC
Q 015636 161 DAEGFRYAGDAEGFRYA---YQTHFSDSFHK--IFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC 235 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~---~~~~f~~~~~~--~F~~~f~~~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C 235 (403)
++++.. .+..+.|..| |+..|++ +.. .|..........++.|+++.|.|||+|+|.|+++++.+.+.+.|+.|
T Consensus 83 ~~~~~~-~~~~~~f~~f~~~fg~~~gg-~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C 160 (386)
T PRK14289 83 GFSGEG-MSMEDIFSMFGDIFGGHGGG-FGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHC 160 (386)
T ss_pred CCCCCC-cChhhhhHHhhhhhcccccC-cccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCC
Confidence 010000 0011122111 2111100 000 00000000113468899999999999999999999999999999999
Q ss_pred CCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCC
Q 015636 236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (403)
Q Consensus 236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G 307 (403)
+|+|........+|+.|+|+|.+++. .++.+|+.|.|.|+++...|..|.|.|++.+.+.++|.||+|+++|
T Consensus 161 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G 240 (386)
T PRK14289 161 HGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEG 240 (386)
T ss_pred CCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCC
Confidence 99999888888999999999987543 1367999999999999999999999999999999999999999999
Q ss_pred CEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 308 ~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
++|+|+|+|++...+..+|||+|+|+|++|+.|+|+|+||++++.|+|.|||+|+++.|+|+||+++|+||++
T Consensus 241 ~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g 313 (386)
T PRK14289 241 MQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAG 313 (386)
T ss_pred CEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCc
Confidence 9999999999876677899999999999999999999999999999999999999999999999999999963
No 28
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-59 Score=471.66 Aligned_cols=279 Identities=39% Similarity=0.723 Sum_probs=239.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCCC
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~~ 161 (403)
.|||+||||+++|+.+|||+|||+||++||||++++ +.++++|++|++||+||+||.+|+.||.+|..+.... ..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~----~~ 77 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA----AG 77 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccC----CC
Confidence 599999999999999999999999999999999974 6788999999999999999999999999976543210 00
Q ss_pred CCCCcccCCCCcceeccccccccchhhhhhhhhcc-------------ccCCCCCCceEEEEEeeeccccCcceeccccc
Q 015636 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDA 228 (403)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-------------~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~ 228 (403)
+.++. .+ .+|.++|+++|++ ....++.|++++|.|||+|+|.|+++++.+.+
T Consensus 78 ~~~~~------~~---------~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r 142 (374)
T PRK14293 78 FPDMG------DM---------GGFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPH 142 (374)
T ss_pred cCCcc------cc---------cchHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeec
Confidence 00000 00 0112333333321 11246789999999999999999999999999
Q ss_pred eeecccCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEe
Q 015636 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTI 300 (403)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~I 300 (403)
.+.|+.|+|+|........+|+.|+|+|.+... ..+.+|+.|.|.|++++..|..|.|.|++.+.++++|.|
T Consensus 143 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~I 222 (374)
T PRK14293 143 LETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINI 222 (374)
T ss_pred cccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEe
Confidence 999999999999888888899999999987532 126799999999999999999999999999999999999
Q ss_pred CCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 301 PAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 301 p~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
|||+++|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||+.
T Consensus 223 ppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~ 302 (374)
T PRK14293 223 PAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAG 302 (374)
T ss_pred CCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCC
Confidence 99999999999999999876666789999999999999999999999999999999999999999999999989999863
No 29
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-58 Score=464.50 Aligned_cols=278 Identities=37% Similarity=0.677 Sum_probs=237.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCCC
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~~ 161 (403)
.|||++|||+++|+.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|+.||++|..+... .. +
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~--~~-~- 76 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAG--MP-G- 76 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCccccc--cc-C-
Confidence 49999999999999999999999999999999997 4778999999999999999999999999998754211 00 0
Q ss_pred CCCCcccCCCCcceeccccccccchhhhhhhhhcc---------ccCCCCCCceEEEEEeeeccccCcceeccccceeec
Q 015636 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (403)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~---------~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C 232 (403)
. .+|..+ .| .+.++|+.+|++ ....++.|+++.+.|||+|+|.|+++++.+.+.+.|
T Consensus 77 ~---------~~~~~~---~~--d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C 142 (371)
T PRK14292 77 G---------DPFGGM---GF--DPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTEC 142 (371)
T ss_pred C---------cccCcc---CC--ChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecC
Confidence 0 011000 00 122444444442 113468899999999999999999999999999999
Q ss_pred ccCCCccccCCCc-cccCCCccceeEEEeC--------CccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCC
Q 015636 233 DSCHGRGFPADAK-TKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (403)
Q Consensus 233 ~~C~G~G~~~~~~-~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G 303 (403)
+.|+|+|...... ..+|+.|+|+|.+... ..+.+|+.|.|.|+.+...|..|.|.|++...+.++|.||+|
T Consensus 143 ~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G 222 (371)
T PRK14292 143 EHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRG 222 (371)
T ss_pred CCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCC
Confidence 9999999876643 6899999999987532 126799999999999999999999999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 304 ~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+++|++|+|+|+|++..++ . |||||+|++++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+..|+||++
T Consensus 223 ~~~G~~i~~~G~G~~~~~~-~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g 297 (371)
T PRK14292 223 IDEGYRIRVAGMGNEGPGG-N-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPG 297 (371)
T ss_pred CCCCcEEEEecCcCCCCCC-C-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCC
Confidence 9999999999999986544 3 9999999999999999999999999999999999999999999999988999874
No 30
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-55 Score=422.79 Aligned_cols=277 Identities=31% Similarity=0.541 Sum_probs=237.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
...||+||||+++||.+|||+|||+||++||||+|++ +.++|++|++||||||||+||++||++|+.+......+
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~-- 77 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG-- 77 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC--
Confidence 4589999999999999999999999999999999986 78999999999999999999999999987765332111
Q ss_pred CCCCCcccCCCCcceeccccccccchhhhhhhhhccccCCCCCCceEEEEEeeeccccCcceeccccceeecccCCCccc
Q 015636 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF 240 (403)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~ 240 (403)
+|+ ..|+.||+. + .++.+...+|+|+.+.+.|||+|+|.|.++++.++++.+|+.|+|.|.
T Consensus 78 --~g~------~~f~~~F~~--g---------~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGg 138 (337)
T KOG0712|consen 78 --GGF------GGFSQFFGF--G---------GNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGG 138 (337)
T ss_pred --CCC------ccHHHhccC--C---------CcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCC
Confidence 111 115555441 0 112234556999999999999999999999999999999999999998
Q ss_pred cCCCccccCCCccceeEEEe---------CCccccCCcCCCCcEE--eeeeeeEEeeceEEeceEEEEEEeCCCCCCCCE
Q 015636 241 PADAKTKICSTCRGIGRVTI---------PPFTSTCSTCKGLGRI--IKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (403)
Q Consensus 241 ~~~~~~~~C~~C~G~G~~~~---------~~~~~~C~~C~G~G~~--~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~ 309 (403)
...... .|+.|.|+|..+. ++++..|..|+|.|.+ .++.|+.|.|.+++...+.++|.|++|++++++
T Consensus 139 ksg~~~-~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~k 217 (337)
T KOG0712|consen 139 KSGSAP-KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQK 217 (337)
T ss_pred CCCCCC-CCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccce
Confidence 766543 8999999997542 1357899999999998 579999999999999999999999999999999
Q ss_pred EEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCc-EEEEEcCCCee
Q 015636 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKVIVLSLL 383 (403)
Q Consensus 310 i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~~~~~ 383 (403)
|.+.|+++..+ +..+||+++.|..++|+.|.|+|+||++..+|+|.|||+|+.+.+.||||+ +.|.++++.++
T Consensus 218 i~f~geadea~-g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi 291 (337)
T KOG0712|consen 218 ITFKGEADEAP-GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVI 291 (337)
T ss_pred eeeeeeeeecC-CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCcee
Confidence 99999999865 556999999999999999999999999999999999999999999999997 56666665543
No 31
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5e-46 Score=361.31 Aligned_cols=217 Identities=38% Similarity=0.644 Sum_probs=174.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~ 160 (403)
..|||+||||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||++|+||.+|+.||++|..+......+..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~ 81 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP 81 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence 469999999999999999999999999999999997 5778999999999999999999999999998764321100000
Q ss_pred -CCCCCcccCCCCcceeccccccccchhhhhhhhhcc---------------ccCCCCCCceEEEEEeeeccccCcceec
Q 015636 161 -DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------------ETSHFAPDIQVELVLSFAEAAKGCTKHV 224 (403)
Q Consensus 161 -~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~---------------~~~~~g~di~~~l~ltlee~~~G~~~~v 224 (403)
...++ ..|..+ .+ +.|.++|+++|++ ....+|.|+++.+.|||+|++.|+++.+
T Consensus 82 ~~~~~~------~~~~~~---~~-~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i 151 (291)
T PRK14299 82 PGPPGG------GDFSGF---NV-GDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVV 151 (291)
T ss_pred CCCCCC------CCcccc---Cc-CCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEE
Confidence 00000 011000 00 1233444444432 1134688999999999999999999887
Q ss_pred cccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCC
Q 015636 225 SFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (403)
Q Consensus 225 ~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~ 304 (403)
.+. .+.++|.||||+
T Consensus 152 ~l~-----------------------------------------------------------------g~~~~V~Ip~G~ 166 (291)
T PRK14299 152 EVA-----------------------------------------------------------------GERLSVRIPPGV 166 (291)
T ss_pred eeC-----------------------------------------------------------------CEEEEEecCCCc
Confidence 531 146789999999
Q ss_pred CCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcC
Q 015636 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIV 379 (403)
Q Consensus 305 ~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~ 379 (403)
++|++|+|+|+|++. |||+|+|++++|+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||+
T Consensus 167 ~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~~~v~ip~ 235 (291)
T PRK14299 167 REGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPP 235 (291)
T ss_pred CCCcEEEECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCCEEEEeCC
Confidence 999999999999863 899999999999999999999999999999999999999999999999999996
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=4.7e-45 Score=356.99 Aligned_cols=234 Identities=30% Similarity=0.570 Sum_probs=185.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCCC
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~~ 161 (403)
.|||++|||+++|+.+|||+|||+||++||||+++. +.++++|++|++||++|+||.+|+.||.++..+... ..+...
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~-~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~-~~~~~~ 81 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDP-QFNRQF 81 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCc-cccccc
Confidence 699999999999999999999999999999999874 678999999999999999999999999986432110 000000
Q ss_pred CCCCcccCCCCcceeccccccccchhhhhhhhhccc-------cCCCCCCceEEEEEeeeccccCcceeccccceeeccc
Q 015636 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (403)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~ 234 (403)
++ +.+..|. ...|.++|+.+|+.. ...++.|+.+++.|+|+|++.|+.+.+.+.+.+
T Consensus 82 --~~---~~~~~~~-------~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~---- 145 (306)
T PRK10266 82 --QH---GDGQSFN-------AEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV---- 145 (306)
T ss_pred --cc---CCCCCCC-------CCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc----
Confidence 00 0000110 112456666666531 123678999999999999999999998875532
Q ss_pred CCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcC
Q 015636 235 CHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPE 314 (403)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g 314 (403)
|.| .|.+ . ....+.++|.||+|+++|++|+|+|
T Consensus 146 ~~g-----------------~G~~------------------~------------~~~~~~~~V~Ip~G~~~G~~i~~~g 178 (306)
T PRK10266 146 YNA-----------------FGMI------------------E------------QEIPKTLNVKIPAGVGNGQRIRLKG 178 (306)
T ss_pred ccC-----------------CCeE------------------E------------EeeeEEEEEEECCCCcCCcEEEEec
Confidence 222 1211 0 0123579999999999999999999
Q ss_pred CccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 315 AGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 315 ~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+|++..++..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|++++|+|+||+++|+||.+
T Consensus 179 ~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g 244 (306)
T PRK10266 179 QGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPG 244 (306)
T ss_pred CCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCC
Confidence 999976677889999999999999999999999999999999999999999999999999999974
No 33
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.4e-40 Score=316.30 Aligned_cols=240 Identities=43% Similarity=0.774 Sum_probs=205.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCCCC
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~~~ 161 (403)
.|||+||||+++|+..|||+||++||++||||.|.+ ++|.++|++|.+|||||+|+.+|++||.++..+ ..+
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~-------~~~ 114 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ-------HGE 114 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc-------ccc
Confidence 399999999999999999999999999999999986 489999999999999999999999999996543 000
Q ss_pred CCCCcccCCCCcceeccccccccchhhhhhhhhcc-c-cCCCCCCceEEEEEeeeccccCcceeccccceeecccCCCcc
Q 015636 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-E-TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRG 239 (403)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-~-~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G 239 (403)
+ .++++ +.|...|++ . ....+.++++.+.++|+++..|+.+.+.+.....|..|.|.|
T Consensus 115 ~-------~g~~~-------------~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~ 174 (288)
T KOG0715|consen 115 F-------GGNPF-------------DVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSG 174 (288)
T ss_pred c-------cCCcc-------------chHHHhhcccccccccCcccccccccCHHHHhhccccceEEEeecccccccCcC
Confidence 1 11222 122222222 1 123456888999999999999999999999999999999999
Q ss_pred ccCCCccccCCCccceeEEEe---CCccc-cCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCC
Q 015636 240 FPADAKTKICSTCRGIGRVTI---PPFTS-TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEA 315 (403)
Q Consensus 240 ~~~~~~~~~C~~C~G~G~~~~---~~~~~-~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~ 315 (403)
...+.....|..|.|.|.+.. .++.. +|..|.|.|.+..+.|..|.|.|.+...+.+.|.+|+|+.++.+|++++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~ 254 (288)
T KOG0715|consen 175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGH 254 (288)
T ss_pred cccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEecC
Confidence 999999999999999995533 23322 69999999999998899999999999999999999999999999999998
Q ss_pred ccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhh
Q 015636 316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ 357 (403)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~e 357 (403)
|.. ||+|.+.|.+++.|+|+|.|++++..|++++
T Consensus 255 ~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 255 GND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred Ccc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence 753 9999999999999999999999999998864
No 34
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.1e-38 Score=299.81 Aligned_cols=263 Identities=30% Similarity=0.432 Sum_probs=195.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCC
Q 015636 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (403)
Q Consensus 80 ~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~ 159 (403)
..+|||+||||+++|+..|||+|||+||++||||+|+++|.|.+.|++|+.||+|||||.+|+.||++|+.|......
T Consensus 14 ~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~-- 91 (336)
T KOG0713|consen 14 AGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENK-- 91 (336)
T ss_pred cCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccc--
Confidence 357999999999999999999999999999999999999999999999999999999999999999998877654210
Q ss_pred CCCCCCcccCC-CCcceeccccccccchhhhhhhhhccccCCCCCCceEEEEEeeeccccCcceeccccceeecccCCCc
Q 015636 160 GDAEGFRYAGD-AEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR 238 (403)
Q Consensus 160 ~~~~~~~~~~~-~~~f~~~~~~~f~~~~~~~F~~~f~~~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~ 238 (403)
...+ .++ .++|+.+|+.. +- .++.....+...+|.++...+..+++++|.|........+.+.|+. .|+
T Consensus 92 -~~~~---g~~~~~~f~~~f~df-g~----~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~-~g~ 161 (336)
T KOG0713|consen 92 -DGEG---GGGGNDIFSAFFGDF-GV----TVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPA-PGT 161 (336)
T ss_pred -cccc---CCcccchHHHhhccc-cc----ccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceeec-Ccc
Confidence 0000 111 24565555421 10 1111112234577899999999999999999877766655555432 111
Q ss_pred cccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEe-eeeeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCcc
Q 015636 239 GFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII-KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGN 317 (403)
Q Consensus 239 G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~-~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~ 317 (403)
-. ...+..- ..+..+.|....+ ...|.+|.+.+.......+++.+..|+..|....+..+|.
T Consensus 162 ~~-~~~~~~~----------------~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (336)
T KOG0713|consen 162 RK-CNCRLEM----------------FTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGE 224 (336)
T ss_pred cc-cCChhhh----------------eeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCC
Confidence 10 0011111 1112222222221 3455555556666778899999999999999999999998
Q ss_pred CCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCc
Q 015636 318 AGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK 372 (403)
Q Consensus 318 ~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~ 372 (403)
+.. -+.+||+++.+..-+|+.|.|+++||++++.|++.+++.|+..++.++|+.
T Consensus 225 ~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~ 278 (336)
T KOG0713|consen 225 PHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGH 278 (336)
T ss_pred cce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchh
Confidence 864 457999999999999999999999999999999999999999999999985
No 35
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=4.2e-32 Score=281.36 Aligned_cols=134 Identities=14% Similarity=0.119 Sum_probs=113.3
Q ss_pred CceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeE
Q 015636 204 DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMT 283 (403)
Q Consensus 204 di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~ 283 (403)
+|++++.|+|+++|.||++++++.|.+.| |.|.
T Consensus 658 dI~y~l~vtLEeLY~G~tKkIKitR~V~~----g~G~------------------------------------------- 690 (871)
T TIGR03835 658 NLVYEEEVPQILFFNNQIKEIKYTRHTVD----GNTE------------------------------------------- 690 (871)
T ss_pred ceEEecccCHHHHhCCCeEEEEEEEeecc----CCCc-------------------------------------------
Confidence 56888999999999999999999877654 2221
Q ss_pred EeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCe
Q 015636 284 CKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGK 363 (403)
Q Consensus 284 C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~ 363 (403)
..+.+.+.++|.||+|+++|++|+|+|+|+...+ + .|||||+|+++||+.|+|+|+||++++.|+|.+||+|++
T Consensus 691 ----ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpg-g-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgt 764 (871)
T TIGR03835 691 ----STTNEAITLEIQLPITSQLNISAIFKGFGHDFGN-G-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGI 764 (871)
T ss_pred ----ceeeeeEEEEEecCCCCCCCCEEEeccccCCCCC-C-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCE
Confidence 0124567899999999999999999999998643 3 499999999999999999999999999999999999999
Q ss_pred EEeeCCCCcEEEEEcC----CCeeeeeeeee
Q 015636 364 VDVPTLSGKVQVKVIV----LSLLLLLFYSL 390 (403)
Q Consensus 364 ~~I~tldG~~~l~ip~----~~~~~~~~~~~ 390 (403)
+.|+||||++.|+||. +.++-|-.-++
T Consensus 765 IeIpTLDGrVkLkIPpgTqpGqvLRIkGKGM 795 (871)
T TIGR03835 765 IDVFGPNKLFNVRIPGGIKVNDQVIFKDLGL 795 (871)
T ss_pred EEeeCCCCCEEEeeCCCCCCCcEEEECCCCC
Confidence 9999999998999986 34555555554
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=2.1e-20 Score=180.37 Aligned_cols=247 Identities=28% Similarity=0.449 Sum_probs=158.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~~ 159 (403)
..|||++|+|.++|+.+||++||+++|++||||+++.. ..++++|++|.+||++|+||.+|..||.++..+........
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~ 81 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS 81 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence 46999999999999999999999999999999998865 23556899999999999999999999999874433211000
Q ss_pred CC-CCC---CcccCCCCcceeccccc--cccc------------------hhhhhhhhhcc-----------ccCCCCCC
Q 015636 160 GD-AEG---FRYAGDAEGFRYAYQTH--FSDS------------------FHKIFSEIFED-----------ETSHFAPD 204 (403)
Q Consensus 160 ~~-~~~---~~~~~~~~~f~~~~~~~--f~~~------------------~~~~F~~~f~~-----------~~~~~g~d 204 (403)
.. ..+ +......+.|.++|+.. +... +...+....+. ........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T KOG0714|consen 82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP 161 (306)
T ss_pred CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence 00 000 11111122233333310 0000 00000000000 00011112
Q ss_pred ceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEE
Q 015636 205 IQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTC 284 (403)
Q Consensus 205 i~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C 284 (403)
+...+.+++++.+.|+.+...+.+... .....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~- 193 (306)
T KOG0714|consen 162 VEHPLRVSLEDLYKGESKKMKISRQSF-----------------------------------------------TSNGR- 193 (306)
T ss_pred ccCCcceeHHHhccccceeeecccccc-----------------------------------------------cCCcc-
Confidence 233333355555555444444322110 00000
Q ss_pred eeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEE--eecCHhhhhcCC
Q 015636 285 KGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD--SNISFTQAILGG 362 (403)
Q Consensus 285 ~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~--~~Isl~eAllG~ 362 (403)
........+.+.+++++..|+.+....+|..... ..+-++++.+..++|+.|.+.++||... ..|++.+|++|.
T Consensus 194 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~ 269 (306)
T KOG0714|consen 194 ---EGSSRSRYLSISIKPGWKEGTKITFPEEGDEEPG-ILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGV 269 (306)
T ss_pred ---cccCccceeEEeccCCcccccceeccccccccCC-cCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCc
Confidence 0013456788999999999999999999987543 5677888889999999999999999999 999999999999
Q ss_pred eEEeeCCCCcEEEEEcCC
Q 015636 363 KVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 363 ~~~I~tldG~~~l~ip~~ 380 (403)
...+++++|. .+.++..
T Consensus 270 ~~~~~~~~~~-~~~~~~~ 286 (306)
T KOG0714|consen 270 TVFVPTLDGR-SYSLSIN 286 (306)
T ss_pred ceeeecccCc-cccCccc
Confidence 9999999986 3455544
No 37
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1.2e-19 Score=168.80 Aligned_cols=72 Identities=49% Similarity=0.808 Sum_probs=68.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~ 152 (403)
..|+|+||||+++|+.++||||||+||++||||+++++|++.++|++||+||++|+||.+|..||.+|+.|.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 569999999999999999999999999999999999999999999999999999999999999999976654
No 38
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1.1e-18 Score=171.55 Aligned_cols=138 Identities=27% Similarity=0.569 Sum_probs=112.3
Q ss_pred eEEEEEeeeccccCcceec--cccceeecccCCCccccCCCc-------cccCCCccceeEEEeCCccccCCcCCCCcEE
Q 015636 206 QVELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPADAK-------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v--~~~~~~~C~~C~G~G~~~~~~-------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (403)
+.+|.++-...+.-|.-.- .-...+.|++|+|+|.....+ +++|+.|+|+|++ +..+|..|+|.|++
T Consensus 134 ~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~----i~~pC~~C~G~G~v 209 (371)
T COG0484 134 KKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKI----IKDPCGKCKGKGRV 209 (371)
T ss_pred eeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeE----CCCCCCCCCCCCeE
Confidence 4556666666555444332 223578999999999754333 6799999999999 78999999999999
Q ss_pred eeeeeeEEeec-eEEeceE-------------------------------------------------------------
Q 015636 277 IKDHCMTCKGS-GVVDGVK------------------------------------------------------------- 294 (403)
Q Consensus 277 ~~~~C~~C~g~-G~~~~~~------------------------------------------------------------- 294 (403)
.+.+-.+++++ |+.++++
T Consensus 210 ~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~ 289 (371)
T COG0484 210 KKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLD 289 (371)
T ss_pred eeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecC
Confidence 99999999998 8888877
Q ss_pred -EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeE
Q 015636 295 -EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (403)
Q Consensus 295 -~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL 347 (403)
.++|.||||+++|++++|+|+|++...+...|||||+|+|+-+..+..+...|
T Consensus 290 g~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q~~l 343 (371)
T COG0484 290 GRVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQKEL 343 (371)
T ss_pred CCEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHHHHH
Confidence 67899999999999999999999987777789999999999887765554443
No 39
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=6.7e-18 Score=155.87 Aligned_cols=68 Identities=56% Similarity=0.903 Sum_probs=64.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh-HHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 015636 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (403)
Q Consensus 80 ~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~-a~~~f~~i~~Ay~vL~dp~~R~~yd~~ 147 (403)
...+||+||||+++|+..||++|||++|++||||+++.++. ++++|+.|++||++|+|+.+|+.||..
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 44699999999999999999999999999999999998885 999999999999999999999999986
No 40
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=2e-18 Score=165.93 Aligned_cols=74 Identities=51% Similarity=0.834 Sum_probs=69.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCcc
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSEN 154 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~ 154 (403)
..|||++|||+.+|+..||++|||+.|++||||+||+||.|.++|+.+.+||+||+|+.+|+.||.++..+...
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~ 77 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA 77 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999998665443
No 41
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.73 E-value=4.5e-18 Score=128.05 Aligned_cols=63 Identities=54% Similarity=0.979 Sum_probs=59.9
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhh
Q 015636 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYD 145 (403)
Q Consensus 83 ~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yd 145 (403)
|||+||||+++++.++||++|+++++++|||+++.+. .+.+.|+.|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999998765 58899999999999999999999998
No 42
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=4.4e-18 Score=168.02 Aligned_cols=77 Identities=40% Similarity=0.708 Sum_probs=69.4
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccc
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE 155 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~ 155 (403)
..+.|||.+|+|+++||.+|||+|||++++.||||+..+.. .|++.|+.|.+||||||||.+|++||.+|++|....
T Consensus 6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t~ 85 (546)
T KOG0718|consen 6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKTE 85 (546)
T ss_pred cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccccc
Confidence 34569999999999999999999999999999999997422 389999999999999999999999999999987743
No 43
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.71 E-value=6.3e-18 Score=180.04 Aligned_cols=74 Identities=31% Similarity=0.508 Sum_probs=68.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCc
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~ 153 (403)
....+||+||||+++|+..|||+|||+||++||||+++++ .|.++|++|++||+|||||.+|+.||++|..|..
T Consensus 570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 3467999999999999999999999999999999999874 6888999999999999999999999999876643
No 44
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.67 E-value=4.8e-17 Score=160.69 Aligned_cols=71 Identities=49% Similarity=0.733 Sum_probs=65.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~ 149 (403)
.+.+.||+||||.++|+..|||++||+||++||||+|+..- +|.++|+.|+.||+|||||..|+-||.+..
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre 76 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE 76 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence 45679999999999999999999999999999999987653 589999999999999999999999999876
No 45
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=1.2e-16 Score=145.42 Aligned_cols=70 Identities=49% Similarity=0.797 Sum_probs=64.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChhHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 015636 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANK--NNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (403)
Q Consensus 80 ~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~--~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~ 149 (403)
...|+|+||||.++|+..+|++||++||+++|||+++ .+.++.++|++++.||.||+|..+|+.||..|.
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~ 83 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGS 83 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCC
Confidence 3459999999999999999999999999999999994 345689999999999999999999999999864
No 46
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.64 E-value=3.3e-16 Score=116.15 Aligned_cols=59 Identities=58% Similarity=0.901 Sum_probs=54.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChhHHHHHHHHHHHHHHhhhhhh
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-NPSAKRKFQEIRDAYETLRDSEK 140 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~-~~~a~~~f~~i~~Ay~vL~dp~~ 140 (403)
.|||+||||+++++.++||++|+++++++|||++++ .+.+.+.|++|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 389999999999999999999999999999999986 56788999999999999999853
No 47
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=7.8e-16 Score=154.62 Aligned_cols=141 Identities=25% Similarity=0.469 Sum_probs=110.8
Q ss_pred eEEEEEeeeccccCcceecc--ccceeecccCCCccccCCC---------ccccCCCccceeEEEeCCccccCCcCCCCc
Q 015636 206 QVELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (403)
..++.++-...+..|...-. -.....|+.|+|+|..... ...+|+.|+|.|.+ +...|..|.|.|
T Consensus 144 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g 219 (369)
T PRK14282 144 EIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKI----PGEYCHECGGSG 219 (369)
T ss_pred EEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCccee----CCCCCCCCCCce
Confidence 34555555555544433222 2345789999999975321 25689999999998 678899999999
Q ss_pred EEeeeeeeEEeec-eEEeceE-----------------------------------------------------------
Q 015636 275 RIIKDHCMTCKGS-GVVDGVK----------------------------------------------------------- 294 (403)
Q Consensus 275 ~~~~~~C~~C~g~-G~~~~~~----------------------------------------------------------- 294 (403)
.+.+..-.++.++ |+.++++
T Consensus 220 ~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ 299 (369)
T PRK14282 220 RIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPL 299 (369)
T ss_pred eEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeC
Confidence 9988888888877 7776665
Q ss_pred ----EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEE
Q 015636 295 ----EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD 350 (403)
Q Consensus 295 ----~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~ 350 (403)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|+.|+.|++++.+|+.+
T Consensus 300 ldG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 300 PEGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE 359 (369)
T ss_pred CCCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 58999999999999999999999865445689999999999999999999887654
No 48
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=1.5e-15 Score=152.34 Aligned_cols=141 Identities=21% Similarity=0.501 Sum_probs=111.1
Q ss_pred EEEEEeeeccccCcceecc-ccceeecccCCCccccCCC---------ccccCCCccceeEEEeCCccccCCcCCCCcEE
Q 015636 207 VELVLSFAEAAKGCTKHVS-FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v~-~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (403)
.++.+.....+..|...-. ......|+.|+|+|..... ...+|+.|+|.|.+ ++..|..|.|+|.+
T Consensus 142 ~~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v 217 (365)
T PRK14290 142 KRIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRI----PEEKCPRCNGTGTV 217 (365)
T ss_pred EEEEeeecccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeE----ccCCCCCCCCceeE
Confidence 3445554544433322221 1245789999999964321 24689999999998 68899999999999
Q ss_pred eeeeeeEEeec-eEEeceE------------------------------------------------------------E
Q 015636 277 IKDHCMTCKGS-GVVDGVK------------------------------------------------------------E 295 (403)
Q Consensus 277 ~~~~C~~C~g~-G~~~~~~------------------------------------------------------------~ 295 (403)
.+..-.++.++ |+.++++ .
T Consensus 218 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~ 297 (365)
T PRK14290 218 VVNEDISVKIPKGATDNLRLRVKGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK 297 (365)
T ss_pred EEeeEEEEEECCCCCCCcEEEEccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCce
Confidence 99888888887 8877766 6
Q ss_pred EEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEe
Q 015636 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (403)
Q Consensus 296 l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~ 351 (403)
++|.||+|+++|++|+|+|+|++...+..+|||||+|+|+.|+.|++++.+|+.++
T Consensus 298 i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 298 YNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF 353 (365)
T ss_pred EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 88999999999999999999998765556899999999999999999998887653
No 49
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.61 E-value=1.2e-15 Score=110.91 Aligned_cols=55 Identities=56% Similarity=0.985 Sum_probs=51.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhh
Q 015636 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (403)
Q Consensus 83 ~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d 137 (403)
|||++|||+++++.++||++|++|++++|||++++.+.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999999999998656788999999999999986
No 50
>PHA03102 Small T antigen; Reviewed
Probab=99.60 E-value=6.9e-16 Score=134.94 Aligned_cols=66 Identities=24% Similarity=0.466 Sum_probs=60.6
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 015636 82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (403)
Q Consensus 82 ~~~Y~iLgv~~~a--s~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g 151 (403)
..+|+||||+++| |.+|||+|||++|+++|||++++ .++|++|++||++|+|+.+|..||.+|...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~ 72 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDS 72 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence 4689999999999 99999999999999999999864 479999999999999999999999997543
No 51
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=1.5e-15 Score=152.76 Aligned_cols=142 Identities=25% Similarity=0.504 Sum_probs=109.8
Q ss_pred eEEEEEeeeccccCcceecc--ccceeecccCCCccccCC---------CccccCCCccceeEEEeCCccccCCcCCCCc
Q 015636 206 QVELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (403)
..++.++....+..|...-. -.....|+.|+|+|.... ..+.+|+.|+|+|.+ +..+|+.|.|+|
T Consensus 133 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g 208 (377)
T PRK14298 133 RKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQV----IESPCPVCSGTG 208 (377)
T ss_pred EEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcc----cCCCCCCCCCcc
Confidence 34455555555543333222 123468999999996532 125789999999998 678899999999
Q ss_pred EEeeeeeeEEeec-eEEeceE-----------------------------------------------------------
Q 015636 275 RIIKDHCMTCKGS-GVVDGVK----------------------------------------------------------- 294 (403)
Q Consensus 275 ~~~~~~C~~C~g~-G~~~~~~----------------------------------------------------------- 294 (403)
.+.+.+-.++.++ |+.++++
T Consensus 209 ~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~t 288 (377)
T PRK14298 209 KVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPT 288 (377)
T ss_pred EEEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEec
Confidence 9988888888876 7776665
Q ss_pred ---EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEe
Q 015636 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (403)
Q Consensus 295 ---~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~ 351 (403)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|+.++.+++++.+|+.++
T Consensus 289 ldG~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 289 LYGKVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred CCCCEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 578999999999999999999998765556899999999999999999887776553
No 52
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=2.1e-15 Score=151.36 Aligned_cols=120 Identities=28% Similarity=0.584 Sum_probs=100.8
Q ss_pred ceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec-eEEeceE-------
Q 015636 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK------- 294 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~------- 294 (403)
....|+.|+|+|.... ..+.+|+.|+|.|+. +...|..|.|.|.+.+..-.++.++ |+..+++
T Consensus 160 ~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G 235 (366)
T PRK14294 160 SPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKV----IVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEG 235 (366)
T ss_pred CcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCee----cCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCc
Confidence 3578999999997532 136799999999998 6789999999999988777787776 7776665
Q ss_pred -------------------------------------------------------EEEEEeCCCCCCCCEEEEcCCccCC
Q 015636 295 -------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAG 319 (403)
Q Consensus 295 -------------------------------------------------------~l~V~Ip~G~~~G~~i~l~g~G~~~ 319 (403)
.++|.||+|+++|++|+|+|+|++.
T Consensus 236 ~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri~G~G~p~ 315 (366)
T PRK14294 236 EAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPS 315 (366)
T ss_pred cCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEECCCCCCC
Confidence 4689999999999999999999987
Q ss_pred CCCCCcccEEEEEEEEcCCCceeeCCeEEEEe
Q 015636 320 GRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (403)
Q Consensus 320 ~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~ 351 (403)
..+..+|||||+|+|..|+.|++++.+|+..+
T Consensus 316 ~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~ 347 (366)
T PRK14294 316 LRGGGRGDQIIEVEVKVPTRLTKKQEELLTEF 347 (366)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 65556899999999999999999887776553
No 53
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=3.7e-15 Score=149.41 Aligned_cols=139 Identities=22% Similarity=0.464 Sum_probs=107.8
Q ss_pred eEEEEEeeeccccCcceecc--ccceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEee
Q 015636 206 QVELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (403)
..++.++....+..|.-.-. -.....|+.|+|+|.... ..+.+|+.|+|.|.+ +..+|..|.|+|.+.+
T Consensus 138 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~ 213 (365)
T PRK14285 138 KNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKI----ISNPCKSCKGKGSLKK 213 (365)
T ss_pred EEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccc----cCCCCCCCCCCCEEec
Confidence 34455555555444433322 233568999999996432 236789999999998 6789999999999988
Q ss_pred eeeeEEeec-eEEeceE---------------------------------------------------------------
Q 015636 279 DHCMTCKGS-GVVDGVK--------------------------------------------------------------- 294 (403)
Q Consensus 279 ~~C~~C~g~-G~~~~~~--------------------------------------------------------------- 294 (403)
.+-.++.++ |+.++++
T Consensus 214 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~ 293 (365)
T PRK14285 214 KETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASK 293 (365)
T ss_pred cEEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCC
Confidence 888888877 7776665
Q ss_pred EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEE
Q 015636 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (403)
Q Consensus 295 ~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~ 348 (403)
.++|.||+|+++|++++|+|+|++...+...|||||+|+|+.|+.|++++..|+
T Consensus 294 ~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l 347 (365)
T PRK14285 294 KIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLL 347 (365)
T ss_pred EEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 689999999999999999999998765555799999999999999988885543
No 54
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=2e-15 Score=136.36 Aligned_cols=71 Identities=37% Similarity=0.665 Sum_probs=64.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~ 149 (403)
....|||+||||+++|+..|||+|||+|++++|||+++...+.++.|..|++||+.|+|+..|+.|..+|.
T Consensus 96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~ 166 (230)
T KOG0721|consen 96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGN 166 (230)
T ss_pred hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCC
Confidence 34579999999999999999999999999999999998655677889999999999999999999999964
No 55
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.58 E-value=4e-15 Score=149.73 Aligned_cols=141 Identities=24% Similarity=0.501 Sum_probs=108.8
Q ss_pred EEEEEeeeccccCcceecc--ccceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
.++.++-...+..|...-. -.....|+.|+|+|.... ....+|+.|+|.|.. +...|..|.|+|.+.+.
T Consensus 135 ~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 210 (371)
T PRK10767 135 KEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKI----IKDPCKKCHGQGRVEKE 210 (371)
T ss_pred EEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeE----CCCCCCCCCCCceEeee
Confidence 4455555555544433222 223468999999996431 235689999999998 67889999999999888
Q ss_pred eeeEEeec-eEEeceE--------------------------------------------------------------EE
Q 015636 280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV 296 (403)
Q Consensus 280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~l 296 (403)
...++.++ |+..+++ .+
T Consensus 211 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i 290 (371)
T PRK10767 211 KTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRV 290 (371)
T ss_pred eeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcE
Confidence 88887776 6655544 57
Q ss_pred EEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEe
Q 015636 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (403)
Q Consensus 297 ~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~ 351 (403)
+|.||+|+++|++++|+|+|++...+..+|||||+|+|+.++.|++++.+|+.++
T Consensus 291 ~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 291 KLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 8999999999999999999998765567899999999999999999998876553
No 56
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.58 E-value=2.7e-15 Score=144.13 Aligned_cols=69 Identities=48% Similarity=0.747 Sum_probs=63.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~vL~dp~~R~~yd~~ 147 (403)
+..+|||+||||.++|+..||.||||++|.+||||...+..+ |+++|..|..|-|||+||++|+.+|..
T Consensus 391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG 462 (504)
T KOG0624|consen 391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG 462 (504)
T ss_pred hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence 456899999999999999999999999999999999986442 889999999999999999999999985
No 57
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.57 E-value=6.4e-15 Score=148.13 Aligned_cols=139 Identities=25% Similarity=0.480 Sum_probs=106.2
Q ss_pred eEEEEEeeeccccCcceecc--ccceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEee
Q 015636 206 QVELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (403)
..++.++....+..|.-.-. -.....|+.|+|+|.... ....+|+.|+|.|++ +...|..|.|.|.+.+
T Consensus 136 ~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~ 211 (373)
T PRK14301 136 EVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRV----ITHPCPKCKGSGIVQQ 211 (373)
T ss_pred eEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeee----cCCCCCCCCCCceecc
Confidence 34555555555544443322 233468999999997532 226789999999998 6788999999999988
Q ss_pred eeeeEEeec-eEEeceE--------------------------------------------------------------E
Q 015636 279 DHCMTCKGS-GVVDGVK--------------------------------------------------------------E 295 (403)
Q Consensus 279 ~~C~~C~g~-G~~~~~~--------------------------------------------------------------~ 295 (403)
..-.++.++ |+..+++ .
T Consensus 212 ~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~ 291 (373)
T PRK14301 212 TRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDP 291 (373)
T ss_pred ceEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCcc
Confidence 777788776 7666655 5
Q ss_pred EEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEE
Q 015636 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (403)
Q Consensus 296 l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~ 348 (403)
++|.||+|+++|++++|+|+|++...+..+|||||+|+|..|+.+..+..+|+
T Consensus 292 i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~l 344 (373)
T PRK14301 292 VTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELL 344 (373)
T ss_pred EEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 78999999999999999999999765556899999999998887766654443
No 58
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=1.6e-14 Score=145.09 Aligned_cols=114 Identities=24% Similarity=0.513 Sum_probs=94.9
Q ss_pred ceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec-eEEeceE-------
Q 015636 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK------- 294 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~------- 294 (403)
....|+.|+|+|.... ....+|+.|.|+|.+ +...|..|.|.|.+.+..-.++.++ |+.++++
T Consensus 155 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G 230 (369)
T PRK14288 155 ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKI----IKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKG 230 (369)
T ss_pred CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceE----ccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCc
Confidence 4578999999996532 124689999999998 6788999999999998888888887 7766655
Q ss_pred -------------------------------------------------------EEEEEeCCCCCCCCEEEEcCCccCC
Q 015636 295 -------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAG 319 (403)
Q Consensus 295 -------------------------------------------------------~l~V~Ip~G~~~G~~i~l~g~G~~~ 319 (403)
.++|.||+|+++|++++|+|+|++.
T Consensus 231 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~ 310 (369)
T PRK14288 231 NEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKH 310 (369)
T ss_pred cCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCC
Confidence 5899999999999999999999997
Q ss_pred CCCCCcccEEEEEEEEcCCCceeeCC
Q 015636 320 GRGRQHGNLFIKLKVADDPIFSRDGA 345 (403)
Q Consensus 320 ~~g~~~GDL~v~i~v~~h~~F~R~G~ 345 (403)
..+...|||||+|+|+.|+.++.+..
T Consensus 311 ~~~~~~GDL~v~~~v~~P~~ls~~q~ 336 (369)
T PRK14288 311 PESSYRGSLIVELQVIYPKSLNKEQQ 336 (369)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHHH
Confidence 55445799999999998887665553
No 59
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=1.2e-14 Score=147.07 Aligned_cols=138 Identities=28% Similarity=0.601 Sum_probs=106.4
Q ss_pred EEEEEeeeccccCcceecc--ccceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
.++.++-...+..|.-.-. -.....|+.|+|+|.... ....+|+.|+|.|++ +..+|..|.|.|.+.+.
T Consensus 151 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 226 (391)
T PRK14284 151 KELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRV----ITDPCSVCRGQGRIKDK 226 (391)
T ss_pred EEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcc----cCCcCCCCCCcceecce
Confidence 3445555555443332221 123578999999997432 125699999999998 67889999999999888
Q ss_pred eeeEEeec-eEEeceE----------------------------------------------------------------
Q 015636 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------- 294 (403)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------- 294 (403)
+-.++.++ |+.++++
T Consensus 227 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~ 306 (391)
T PRK14284 227 RSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEG 306 (391)
T ss_pred EEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCc
Confidence 88888887 8887776
Q ss_pred EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEE
Q 015636 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (403)
Q Consensus 295 ~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~ 348 (403)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.++.+..+|+
T Consensus 307 ~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll 360 (391)
T PRK14284 307 TCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELL 360 (391)
T ss_pred EEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHH
Confidence 467899999999999999999999765557899999999998887777665543
No 60
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=5.2e-14 Score=141.57 Aligned_cols=134 Identities=25% Similarity=0.547 Sum_probs=101.5
Q ss_pred EEEEEeeeccccCcceec--cccceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v--~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
.++.++-...+..|...- .-.....|+.|+|+|.... ....+|+.|+|.|.+ +..+|..|.|.|.+.+.
T Consensus 138 k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 213 (372)
T PRK14300 138 KNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQI----IKNPCKKCHGMGRYHKQ 213 (372)
T ss_pred EEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceE----eCCCCCCCCCceEEEee
Confidence 344444444443333322 1233578999999997532 125689999999998 67889999999999888
Q ss_pred eeeEEeec-eEEeceE---------------------------------------------------------------E
Q 015636 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E 295 (403)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~ 295 (403)
.-.++.++ |+.++.+ .
T Consensus 214 ~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~ 293 (372)
T PRK14300 214 RNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGK 293 (372)
T ss_pred EEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCE
Confidence 77888776 7665554 6
Q ss_pred EEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeC
Q 015636 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDG 344 (403)
Q Consensus 296 l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G 344 (403)
++|.||+|+++|++++|+|+|++...+..+|||||+|+|+.+..++-+.
T Consensus 294 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~q 342 (372)
T PRK14300 294 VNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQ 342 (372)
T ss_pred EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence 8899999999999999999999876556789999999999887755444
No 61
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=1.5e-14 Score=145.39 Aligned_cols=139 Identities=24% Similarity=0.532 Sum_probs=106.0
Q ss_pred eEEEEEeeeccccCcceec--cccceeecccCCCccccCCC---------ccccCCCccceeEEEeCCccccCCcCCCCc
Q 015636 206 QVELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v--~~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (403)
..++.++....+.-|.-.- .-.....|+.|+|+|..... ...+|+.|.|.|.+ +...|..|+|.|
T Consensus 130 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g 205 (371)
T PRK14287 130 ETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKI----IKQKCATCGGKG 205 (371)
T ss_pred EEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcc----ccccCCCCCCee
Confidence 3455555555544333221 22345789999999965321 25689999999998 678899999999
Q ss_pred EEeeeeeeEEeec-eEEeceE-----------------------------------------------------------
Q 015636 275 RIIKDHCMTCKGS-GVVDGVK----------------------------------------------------------- 294 (403)
Q Consensus 275 ~~~~~~C~~C~g~-G~~~~~~----------------------------------------------------------- 294 (403)
.+.+....++.++ |+..+++
T Consensus 206 ~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ 285 (371)
T PRK14287 206 KVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPT 285 (371)
T ss_pred EEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEc
Confidence 9988788888776 7666555
Q ss_pred ---EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEE
Q 015636 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (403)
Q Consensus 295 ---~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~ 348 (403)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.++++...|+
T Consensus 286 ldg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14287 286 LNGKVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELM 342 (371)
T ss_pred CCCCEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHH
Confidence 578999999999999999999998765556899999999999988877765443
No 62
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=2.6e-14 Score=144.02 Aligned_cols=135 Identities=28% Similarity=0.533 Sum_probs=102.1
Q ss_pred eEEEEEeeeccccCcceec--cccceeecccCCCccccCCC---------ccccCCCccceeEEEeCCccccCCcCCCCc
Q 015636 206 QVELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v--~~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (403)
..++.++-...+..|.-.- .-.....|+.|+|+|..... ...+|+.|+|.|.+ +..+|+.|.|+|
T Consensus 131 ~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g 206 (378)
T PRK14278 131 TKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEV----IPDPCHECAGDG 206 (378)
T ss_pred EEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCcccee----eCCCCCCCCCce
Confidence 3455555555554443322 22345789999999974321 25689999999998 678899999999
Q ss_pred EEeeeeeeEEeec-eEEeceE-----------------------------------------------------------
Q 015636 275 RIIKDHCMTCKGS-GVVDGVK----------------------------------------------------------- 294 (403)
Q Consensus 275 ~~~~~~C~~C~g~-G~~~~~~----------------------------------------------------------- 294 (403)
.+.+.+-.++.++ |+.++++
T Consensus 207 ~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~t 286 (378)
T PRK14278 207 RVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEA 286 (378)
T ss_pred eEecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEec
Confidence 9988888888877 7766665
Q ss_pred ----EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeC
Q 015636 295 ----EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDG 344 (403)
Q Consensus 295 ----~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G 344 (403)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|.-+..+..+.
T Consensus 287 ld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~Ls~~q 340 (378)
T PRK14278 287 ILDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHED 340 (378)
T ss_pred CCCCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHH
Confidence 57899999999999999999999875555689999999999665544333
No 63
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.53 E-value=2.1e-14 Score=143.76 Aligned_cols=137 Identities=31% Similarity=0.584 Sum_probs=103.7
Q ss_pred EEEEEeeeccccCcceecc--ccceeecccCCCccccCC---------CccccCCCccceeEEEeCCccccCCcCCCCcE
Q 015636 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (403)
.++.++....+..|...-. -.....|+.|+|+|.... ....+|+.|+|.|++ ++..|..|.|+|.
T Consensus 136 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 211 (354)
T TIGR02349 136 KEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKI----IKEPCSTCKGKGR 211 (354)
T ss_pred EEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCccee----cCCCCCCCCCCcE
Confidence 3455555555544433322 123578999999996432 124699999999998 6778999999999
Q ss_pred EeeeeeeEEeec-eEEeceE------------------------------------------------------------
Q 015636 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (403)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (403)
+.+..-.++.++ |+..+++
T Consensus 212 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~l 291 (354)
T TIGR02349 212 VKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTL 291 (354)
T ss_pred ecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecC
Confidence 887777777766 6655544
Q ss_pred --EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeE
Q 015636 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (403)
Q Consensus 295 --~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL 347 (403)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.+++++.++
T Consensus 292 dG~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~ 346 (354)
T TIGR02349 292 DGDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKEL 346 (354)
T ss_pred CceEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 47899999999999999999999976555789999999999888887766544
No 64
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.52 E-value=2.9e-14 Score=143.33 Aligned_cols=136 Identities=25% Similarity=0.450 Sum_probs=101.3
Q ss_pred EEEEEeeeccccCcceecc--ccceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
.+|.++....+..|.-.-. -.....|+.|+|+|.... ....+|+.|+|+|++ +..+|..|.|.|.+.+.
T Consensus 143 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~ 218 (372)
T PRK14286 143 YKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTV----ISNPCKTCGGQGLQEKR 218 (372)
T ss_pred EEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeE----ecccCCCCCCCcEEecc
Confidence 4455555555543333221 123468999999996532 235689999999998 67889999999999877
Q ss_pred eeeEEeec-eEEeceE---------------------------------------------------------------E
Q 015636 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E 295 (403)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~ 295 (403)
+-.++.++ |+..+++ .
T Consensus 219 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~ 298 (372)
T PRK14286 219 RTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKK 298 (372)
T ss_pred eEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCE
Confidence 77777765 6655544 5
Q ss_pred EEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCe
Q 015636 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGAD 346 (403)
Q Consensus 296 l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~D 346 (403)
++|.||+|+++|++++|+|+|++...+...|||||+|+|.-+..+..+..+
T Consensus 299 i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~ 349 (372)
T PRK14286 299 AKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQRE 349 (372)
T ss_pred EEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHH
Confidence 889999999999999999999997655568999999999977665554433
No 65
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=3.8e-14 Score=143.32 Aligned_cols=132 Identities=27% Similarity=0.536 Sum_probs=100.5
Q ss_pred EEEEEeeeccccCcceecc--ccceeecccCCCccccCCC-----ccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA-----KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~~-----~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
.++.++-...+.-|.-.-. -.....|+.|+|+|..... ...+|+.|+|+|++ +..+|..|.|.|.+.+.
T Consensus 166 ~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----i~~~C~~C~G~g~v~~~ 241 (392)
T PRK14279 166 MPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSI----IEDPCEECKGTGVTTRT 241 (392)
T ss_pred EEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEE----eCCcCCCCCCCeEEEEe
Confidence 4555555555543333222 2245789999999975321 25799999999998 67889999999999888
Q ss_pred eeeEEeec-eEEeceE--------------------------------------------------------------EE
Q 015636 280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV 296 (403)
Q Consensus 280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~l 296 (403)
+-.++.++ |+.++++ .+
T Consensus 242 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i 321 (392)
T PRK14279 242 RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPV 321 (392)
T ss_pred eeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceE
Confidence 77788776 7666555 57
Q ss_pred EEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceee
Q 015636 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD 343 (403)
Q Consensus 297 ~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~ 343 (403)
+|+||+|+++|++|+|+|+|++.. +..+|||||+|+|.-+..+..+
T Consensus 322 ~v~Ip~g~~~g~~iri~g~G~p~~-~~~~GDL~I~~~v~~P~~Ls~~ 367 (392)
T PRK14279 322 GVKVPAGTADGRILRVRGRGVPKR-SGGAGDLLVTVKVAVPPNLDGA 367 (392)
T ss_pred EEEECCCCCCCCEEEECCCCCCCC-CCCCCCEEEEEEEECCCCCCHH
Confidence 899999999999999999999964 4568999999999977654333
No 66
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=3.8e-14 Score=143.61 Aligned_cols=131 Identities=31% Similarity=0.525 Sum_probs=100.0
Q ss_pred eEEEEEeeecccc---CcceeccccceeecccCCCccccCCC---------ccccCCCccceeEEEeCCccccCCcCCCC
Q 015636 206 QVELVLSFAEAAK---GCTKHVSFDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGL 273 (403)
Q Consensus 206 ~~~l~ltlee~~~---G~~~~v~~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~ 273 (403)
..++.++....+. |....- .....|+.|+|+|..... ...+|+.|+|.|.+ +..+|+.|.|.
T Consensus 155 ~~~i~~~r~~~C~~C~G~G~~~--~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~ 228 (397)
T PRK14281 155 EKTLKIKKQVPCKECNGTGSKT--GATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRV----VKDRCPACYGE 228 (397)
T ss_pred EEEEEEEeeecCCCCCCcccCC--CCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeee----eCCCCCCCCCC
Confidence 3455555555543 332222 245789999999975321 25689999999998 67889999999
Q ss_pred cEEeeeeeeEEeec-eEEeceE----------------------------------------------------------
Q 015636 274 GRIIKDHCMTCKGS-GVVDGVK---------------------------------------------------------- 294 (403)
Q Consensus 274 G~~~~~~C~~C~g~-G~~~~~~---------------------------------------------------------- 294 (403)
|.+.+..-.++.++ |+.++++
T Consensus 229 g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~ 308 (397)
T PRK14281 229 GIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVP 308 (397)
T ss_pred ccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEee
Confidence 99988878888876 7766665
Q ss_pred ----EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCcee
Q 015636 295 ----EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSR 342 (403)
Q Consensus 295 ----~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R 342 (403)
.++|.||+|+++|++++|+|+|++...+...|||||+|+|.-+..+..
T Consensus 309 tldg~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls~ 360 (397)
T PRK14281 309 TLDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSH 360 (397)
T ss_pred cCCccEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCCH
Confidence 578999999999999999999998755556899999999996655433
No 67
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=4.9e-14 Score=141.94 Aligned_cols=134 Identities=25% Similarity=0.521 Sum_probs=100.4
Q ss_pred EEEEEeeeccccCcceec--cccceeecccCCCccccCC---------CccccCCCccceeEEEeCCccccCCcCCCCcE
Q 015636 207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v--~~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (403)
.++.++....+..|...- .-.....|+.|+|+|.... ..+.+|+.|+|.|.+ +..+|+.|.|+|.
T Consensus 136 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 211 (376)
T PRK14280 136 KEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQE----IKEKCPTCHGKGK 211 (376)
T ss_pred eEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCce----ecCCCCCCCCceE
Confidence 344455554444333322 2234578999999996431 135689999999998 6788999999999
Q ss_pred EeeeeeeEEeec-eEEeceE------------------------------------------------------------
Q 015636 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (403)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (403)
+.+.+-.++.++ |+..+++
T Consensus 212 v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl 291 (376)
T PRK14280 212 VRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTL 291 (376)
T ss_pred EEEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecC
Confidence 988777777776 7666555
Q ss_pred --EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeC
Q 015636 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDG 344 (403)
Q Consensus 295 --~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G 344 (403)
.++|.||+|+++|++++|+|+|++...+...|||||+|+|..+..+..+.
T Consensus 292 dg~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls~~q 343 (376)
T PRK14280 292 HGKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLTDRQ 343 (376)
T ss_pred CceEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence 57899999999999999999999876555689999999999776544333
No 68
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.50 E-value=5.2e-14 Score=141.95 Aligned_cols=134 Identities=25% Similarity=0.524 Sum_probs=101.0
Q ss_pred EEEEEeeeccccCcceecc--ccceeecccCCCccccCCC---------ccccCCCccceeEEEeCCccccCCcCCCCcE
Q 015636 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (403)
.++.++-...+.-|.-.-. -.....|+.|+|+|..... ...+|+.|+|.|.+ +..+|..|.|.|.
T Consensus 139 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 214 (380)
T PRK14276 139 KEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKE----IKEPCQTCHGTGH 214 (380)
T ss_pred EEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcc----ccCCCCCCCCceE
Confidence 4455555544433322221 1235689999999975321 25689999999998 6788999999999
Q ss_pred EeeeeeeEEeec-eEEeceE------------------------------------------------------------
Q 015636 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (403)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (403)
+.+....++.++ |+..+++
T Consensus 215 ~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tl 294 (380)
T PRK14276 215 EKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTV 294 (380)
T ss_pred EEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcC
Confidence 988888888877 7766665
Q ss_pred --EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeC
Q 015636 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDG 344 (403)
Q Consensus 295 --~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G 344 (403)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|.-+..+..+.
T Consensus 295 dg~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q 346 (380)
T PRK14276 295 HGDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLNDAQ 346 (380)
T ss_pred CCcEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence 57899999999999999999999976555689999999999776544433
No 69
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.48 E-value=6.8e-14 Score=140.87 Aligned_cols=120 Identities=24% Similarity=0.455 Sum_probs=95.8
Q ss_pred ceeecccCCCccccCC---------CccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec-eEEeceE---
Q 015636 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (403)
....|+.|+|+|.... ....+|+.|.|.|++ +...|..|.|.|.+.+..-.++.++ |+..+++
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l 234 (374)
T PRK14293 159 GPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQV----IEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRV 234 (374)
T ss_pred CCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeE----eccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEE
Confidence 3468999999997431 124689999999998 6778999999999877666666655 5544443
Q ss_pred -----------------------------------------------------------EEEEEeCCCCCCCCEEEEcCC
Q 015636 295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (403)
Q Consensus 295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~l~g~ 315 (403)
.++|.||+|+++|++++|+|+
T Consensus 235 ~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~ 314 (374)
T PRK14293 235 SGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENK 314 (374)
T ss_pred ccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCC
Confidence 568999999999999999999
Q ss_pred ccCCCCC-CCcccEEEEEEEEcCCCceeeCCeEEEEe
Q 015636 316 GNAGGRG-RQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (403)
Q Consensus 316 G~~~~~g-~~~GDL~v~i~v~~h~~F~R~G~DL~~~~ 351 (403)
|++...+ +..|||||+|+|..++.+++++.+|+..+
T Consensus 315 G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l 351 (374)
T PRK14293 315 GVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKL 351 (374)
T ss_pred CCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 9986543 35799999999999999998887775543
No 70
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.48 E-value=5.7e-14 Score=126.17 Aligned_cols=66 Identities=32% Similarity=0.539 Sum_probs=58.7
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 015636 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (403)
Q Consensus 82 ~~~Y~iLgv~~~--as~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yd~~ 147 (403)
.|||++|||++. ++..+|+++||+|++++|||+..+.+. +.+.|..||+||++|+||.+|+.|+-.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~ 73 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS 73 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence 389999999995 688999999999999999999875443 567899999999999999999999864
No 71
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.48 E-value=1.1e-13 Score=139.22 Aligned_cols=133 Identities=20% Similarity=0.475 Sum_probs=99.8
Q ss_pred EEEEEeeeccccCcceecc--ccceeecccCCCccccCCC---------ccccCCCccceeEEEeCCccccCCcCCCCcE
Q 015636 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (403)
.++.++-...+..|...-. -.....|+.|+|+|..... ...+|+.|+|+|++ +...|+.|.|.|.
T Consensus 142 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 217 (372)
T PRK14296 142 KIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKI----IKNKCKNCKGKGK 217 (372)
T ss_pred EEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCccee----ecccccCCCCceE
Confidence 4455555555544443322 1235789999999975422 24689999999998 6788999999999
Q ss_pred EeeeeeeEEeec-eEEeceE------------------------------------------------------------
Q 015636 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (403)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (403)
+.+.+-.++.++ |+..+++
T Consensus 218 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~t 297 (372)
T PRK14296 218 YLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKT 297 (372)
T ss_pred EEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeC
Confidence 887777787776 7666655
Q ss_pred ---EEEEEeCCCCCCCCEEEEcCCccCCC-CCCCcccEEEEEEEEcCCCceee
Q 015636 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGG-RGRQHGNLFIKLKVADDPIFSRD 343 (403)
Q Consensus 295 ---~l~V~Ip~G~~~G~~i~l~g~G~~~~-~g~~~GDL~v~i~v~~h~~F~R~ 343 (403)
.++|.||+|+++|++++|+|+|+|.. .+...|||||+|+|+-+..+..+
T Consensus 298 ldG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~ 350 (372)
T PRK14296 298 LDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKK 350 (372)
T ss_pred CCCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHH
Confidence 67899999999999999999999843 23457999999999966554433
No 72
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.47 E-value=1.2e-13 Score=139.65 Aligned_cols=132 Identities=27% Similarity=0.509 Sum_probs=99.6
Q ss_pred EEEEEeeeccccCcceecc--ccceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
.++.++-...+.-|.-.-. -.....|+.|+|+|.... ..+.+|+.|+|+|.+ +..+|..|.|.|.+.+.
T Consensus 159 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~ 234 (389)
T PRK14295 159 VPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLI----ADDPCLVCKGSGRAKSS 234 (389)
T ss_pred EEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEE----eccCCCCCCCCceEeee
Confidence 4455555554444433222 233578999999996432 235689999999998 67889999999999887
Q ss_pred eeeEEeec-eEEeceE---------------------------------------------------------------E
Q 015636 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E 295 (403)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~ 295 (403)
+-.++.++ |+..+++ .
T Consensus 235 ~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~ 314 (389)
T PRK14295 235 RTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPP 314 (389)
T ss_pred eEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCE
Confidence 77788776 7766655 6
Q ss_pred EEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceee
Q 015636 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD 343 (403)
Q Consensus 296 l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~ 343 (403)
++|.||+|+++|++|+|+|+|++.. ++.+|||||+|+|.-+.....+
T Consensus 315 ~~v~ip~g~~~g~~iri~G~G~p~~-~~~~GDL~i~~~v~~P~~Ls~~ 361 (389)
T PRK14295 315 VTVKLPPGTPNGRVLRVRGKGAVRK-DGTRGDLLVTVEVAVPKDLSGK 361 (389)
T ss_pred EEEEECCccCCCcEEEECCCCcCCC-CCCCCCEEEEEEEECCCCCCHH
Confidence 8899999999999999999999864 4568999999999966554333
No 73
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.47 E-value=1.1e-13 Score=139.73 Aligned_cols=133 Identities=26% Similarity=0.482 Sum_probs=101.0
Q ss_pred EEEEEeeeccccCcceecc--ccceeecccCCCccccCC---------CccccCCCccceeEEEeCCccccCCcCCCCcE
Q 015636 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (403)
.++.++....+..|.-.-. -.....|+.|+|+|.... ..+.+|+.|+|.|.+ +...|..|.|.|.
T Consensus 141 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 216 (380)
T PRK14297 141 KEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKV----IEDPCNKCHGKGK 216 (380)
T ss_pred EEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceE----cCCCCCCCCCCeE
Confidence 4455555555443333221 223578999999996531 235789999999998 6788999999999
Q ss_pred EeeeeeeEEeec-eEEeceE------------------------------------------------------------
Q 015636 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (403)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (403)
+.+....++.++ |+..+++
T Consensus 217 v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~l 296 (380)
T PRK14297 217 VRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTV 296 (380)
T ss_pred EEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcC
Confidence 888888888877 7766665
Q ss_pred --EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceee
Q 015636 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD 343 (403)
Q Consensus 295 --~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~ 343 (403)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|+-+..+..+
T Consensus 297 dg~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~ 347 (380)
T PRK14297 297 DGEVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLNSK 347 (380)
T ss_pred CCcEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEEEEEEcCCCCCHH
Confidence 5789999999999999999999987655568999999999966554333
No 74
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.47 E-value=1.1e-13 Score=139.89 Aligned_cols=131 Identities=24% Similarity=0.501 Sum_probs=100.8
Q ss_pred eEEEEEeeeccccCcceecc--ccceeecccCCCccccCCC---------ccccCCCccceeEEEeCCccccCCcCCCCc
Q 015636 206 QVELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (403)
..++.++-...+..|...-. -.....|+.|+|+|..... ...+|+.|+|.|.+ +...|..|.|+|
T Consensus 146 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g 221 (386)
T PRK14289 146 EKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKI----IKKKCKKCGGEG 221 (386)
T ss_pred EEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccc----cCcCCCCCCCCc
Confidence 34555565666555544332 2345789999999975422 25689999999998 678899999999
Q ss_pred EEeeeeeeEEeec-eEEeceE-----------------------------------------------------------
Q 015636 275 RIIKDHCMTCKGS-GVVDGVK----------------------------------------------------------- 294 (403)
Q Consensus 275 ~~~~~~C~~C~g~-G~~~~~~----------------------------------------------------------- 294 (403)
.+.+..-.++.++ |+..+++
T Consensus 222 ~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ 301 (386)
T PRK14289 222 IVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPT 301 (386)
T ss_pred EEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeec
Confidence 9988777777776 6665554
Q ss_pred ---EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCc
Q 015636 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIF 340 (403)
Q Consensus 295 ---~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F 340 (403)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|+-+...
T Consensus 302 ldg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l 350 (386)
T PRK14289 302 IDGKAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIPETL 350 (386)
T ss_pred CCceEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEeCCCC
Confidence 6789999999999999999999987655678999999999955443
No 75
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.47 E-value=1.4e-13 Score=139.16 Aligned_cols=132 Identities=28% Similarity=0.536 Sum_probs=97.7
Q ss_pred EEEEEeeeccccCcceec--cccceeecccCCCccccCC---------CccccCCCccceeEEEeCCccccCCcCCCCcE
Q 015636 207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (403)
Q Consensus 207 ~~l~ltlee~~~G~~~~v--~~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (403)
.+|.++-...+.-|.-.- .-.....|+.|+|+|.... ....+|+.|+|+|.+ +..+|..|.|+|.
T Consensus 148 ~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 223 (386)
T PRK14277 148 KEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKI----ITDPCNKCGGTGR 223 (386)
T ss_pred EEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceee----ccCCCCCCCCCcE
Confidence 344455555444332222 1233578999999996532 124689999999998 6788999999999
Q ss_pred EeeeeeeEEeec-eEEeceE------------------------------------------------------------
Q 015636 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (403)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (403)
+.+.+..++.++ |+..+++
T Consensus 224 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl 303 (386)
T PRK14277 224 IRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTL 303 (386)
T ss_pred EeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcC
Confidence 987777777765 6655554
Q ss_pred --EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCcee
Q 015636 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSR 342 (403)
Q Consensus 295 --~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R 342 (403)
.++|.||+|+++|++++|+|+|++...+...|||||+|+|+-+...+.
T Consensus 304 dG~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~V~~P~~Ls~ 353 (386)
T PRK14277 304 DGKVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTE 353 (386)
T ss_pred CCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCH
Confidence 468899999999999999999998755556899999999996554433
No 76
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.47 E-value=1.3e-13 Score=138.75 Aligned_cols=137 Identities=24% Similarity=0.497 Sum_probs=102.7
Q ss_pred EEEEEeeecccc---CcceeccccceeecccCCCccccCCC---------ccccCCCccceeEEEeCCccccCCcCCCCc
Q 015636 207 VELVLSFAEAAK---GCTKHVSFDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (403)
Q Consensus 207 ~~l~ltlee~~~---G~~~~v~~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (403)
.++.++-...+. |............|+.|+|+|..... ...+|+.|+|.|.. +...|..|.|+|
T Consensus 132 ~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g 207 (371)
T PRK14292 132 VEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQI----ITDPCTVCRGRG 207 (371)
T ss_pred EEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCccccee----cCCCCCCCCCce
Confidence 344444444443 43332222336789999999965421 24689999999998 688999999999
Q ss_pred EEeeeeeeEEeec-eEEeceE-----------------------------------------------------------
Q 015636 275 RIIKDHCMTCKGS-GVVDGVK----------------------------------------------------------- 294 (403)
Q Consensus 275 ~~~~~~C~~C~g~-G~~~~~~----------------------------------------------------------- 294 (403)
.+.+..-.++.++ |+..+++
T Consensus 208 ~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tld 287 (371)
T PRK14292 208 RTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLD 287 (371)
T ss_pred EEeecceEEEEECCCCCCCcEEEEecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCC
Confidence 9987777777776 7665554
Q ss_pred -EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeE
Q 015636 295 -EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (403)
Q Consensus 295 -~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL 347 (403)
..+|.||+|+++|++++|+|+|++...+..+|||||+|+|+.++.++.+...|
T Consensus 288 G~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~l 341 (371)
T PRK14292 288 GPQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREA 341 (371)
T ss_pred CCEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 35799999999999999999999876566789999999999988776655443
No 77
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.46 E-value=7.8e-14 Score=124.57 Aligned_cols=67 Identities=30% Similarity=0.510 Sum_probs=58.3
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 82 ~~~Y~iLgv~~~--as~~eIk~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
.|||++|||++. ++..+|+++||+|++++|||++.+..+ +.+.+..||+||++|+||.+|+.|+-..
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l 73 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL 73 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence 489999999996 789999999999999999999875332 3345789999999999999999998764
No 78
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.46 E-value=1.1e-13 Score=124.62 Aligned_cols=67 Identities=31% Similarity=0.513 Sum_probs=58.8
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHH-----HHHHHHHHHHHhhhhhhhhhhhhc
Q 015636 81 KRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETLRDSEKRAQYDRR 147 (403)
Q Consensus 81 ~~~~Y~iLgv~~~--as~~eIk~ayr~la~~~HPD~~~~~~~a~~-----~f~~i~~Ay~vL~dp~~R~~yd~~ 147 (403)
..|||++|||++. ++..+|+++|++|++++|||++.+.+.+++ .+..||+||++|+||.+|+.|+-.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~ 78 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLH 78 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHH
Confidence 3699999999995 688999999999999999999986665444 458999999999999999999964
No 79
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.46 E-value=1.3e-13 Score=123.65 Aligned_cols=69 Identities=23% Similarity=0.435 Sum_probs=61.0
Q ss_pred CCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 80 SKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 80 ~~~~~Y~iLgv~~~--as~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
...|||++|||++. .+..+|+++||+|++++|||++.+.+. +.+.|..||+||++|+||.+|+.|+-..
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l 77 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLAL 77 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence 45799999999996 678999999999999999999976553 5567999999999999999999999753
No 80
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.45 E-value=5.2e-13 Score=134.79 Aligned_cols=128 Identities=30% Similarity=0.535 Sum_probs=98.8
Q ss_pred eEEEEEeeeccccCcceec--cccceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEee
Q 015636 206 QVELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v--~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (403)
..++.++-...+..|...- .-.....|+.|+|+|.... ..+.+|+.|+|.|. +...|..|.|.|.+.+
T Consensus 148 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-----~~~~C~~C~G~g~v~~ 222 (382)
T PRK14291 148 TVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-----LREPCSKCNGRGLVIK 222 (382)
T ss_pred EEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceE-----EccCCCCCCCCceEEe
Confidence 3455555555554443322 1234578999999996532 23578999999995 3678999999999998
Q ss_pred eeeeEEeec-eEEeceE---------------------------------------------------------------
Q 015636 279 DHCMTCKGS-GVVDGVK--------------------------------------------------------------- 294 (403)
Q Consensus 279 ~~C~~C~g~-G~~~~~~--------------------------------------------------------------- 294 (403)
..-.++.++ |+.++++
T Consensus 223 ~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~ 302 (382)
T PRK14291 223 KETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGK 302 (382)
T ss_pred eeEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCC
Confidence 888888887 8777665
Q ss_pred EEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCC
Q 015636 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP 338 (403)
Q Consensus 295 ~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~ 338 (403)
.++|.||+|+++|++|+|+|+|++...+..+|||||+|+|.-+.
T Consensus 303 ~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P~ 346 (382)
T PRK14291 303 KEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVPK 346 (382)
T ss_pred EEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence 58999999999999999999999976555689999999999553
No 81
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.45 E-value=5.3e-13 Score=135.74 Aligned_cols=125 Identities=24% Similarity=0.515 Sum_probs=98.0
Q ss_pred ceeecccCCCccccCC---------CccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec-eEEeceE---
Q 015636 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (403)
....|+.|+|+|.... ..+.+|+.|+|+|++.. ...+|..|.|.|.+.+.+-.++.++ |+.++++
T Consensus 165 ~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~ 242 (421)
T PTZ00037 165 AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIP--ESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITF 242 (421)
T ss_pred CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecc--ccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEE
Confidence 4578999999996321 12568999999999721 2478999999999998888999987 8887766
Q ss_pred -----------------------------------------------------------EEEEEeCCC--CCCCCEEEEc
Q 015636 295 -----------------------------------------------------------EVKVTIPAG--VDSGDTIRVP 313 (403)
Q Consensus 295 -----------------------------------------------------------~l~V~Ip~G--~~~G~~i~l~ 313 (403)
.+.|.||+| +++|++++|+
T Consensus 243 ~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~ 322 (421)
T PTZ00037 243 HGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVIN 322 (421)
T ss_pred ecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeC
Confidence 588999999 9999999999
Q ss_pred CCccCCCCC-CCcccEEEEEEEEcC--CCceeeCCeEEEEeecCHhhhhcCC
Q 015636 314 EAGNAGGRG-RQHGNLFIKLKVADD--PIFSRDGADVYVDSNISFTQAILGG 362 (403)
Q Consensus 314 g~G~~~~~g-~~~GDL~v~i~v~~h--~~F~R~G~DL~~~~~Isl~eAllG~ 362 (403)
|+|+|...+ ...|||||+|+|.-+ ..+ +.....+.+.|+..
T Consensus 323 geGmP~~~~~~~rGDL~V~~~V~~P~~~~L--------s~~qk~ll~~l~~~ 366 (421)
T PTZ00037 323 NEGMPTYKSPFKKGNLYVTFEVIFPVDRKF--------TNEEKEILKSLFPQ 366 (421)
T ss_pred CCCcccCCCCCCCCCEEEEEEEEcCCCCCC--------CHHHHHHHHHhccC
Confidence 999986543 357999999999955 443 33345556666653
No 82
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.44 E-value=3e-13 Score=136.41 Aligned_cols=113 Identities=31% Similarity=0.601 Sum_probs=89.4
Q ss_pred ceeecccCCCccccCC---------CccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec-eEEeceE---
Q 015636 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (403)
....|+.|+|+|.... ....+|+.|.|.|.. +..+|..|.|+|.+.+.+..++..+ |+..+++
T Consensus 162 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l 237 (378)
T PRK14283 162 EVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKI----VEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRV 237 (378)
T ss_pred CCccCCCcCCccEEEEEEeccCceEEEEEECCCCCcccee----cCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEE
Confidence 3468999999997532 125689999999998 6788999999999887777777765 5443333
Q ss_pred -----------------------------------------------------------EEEEEeCCCCCCCCEEEEcCC
Q 015636 295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (403)
Q Consensus 295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~l~g~ 315 (403)
.++|.||+|+++|++++|+|+
T Consensus 238 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~ 317 (378)
T PRK14283 238 SGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGH 317 (378)
T ss_pred eccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCC
Confidence 578999999999999999999
Q ss_pred ccCCCCCCCcccEEEEEEEEcCCCceeeC
Q 015636 316 GNAGGRGRQHGNLFIKLKVADDPIFSRDG 344 (403)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h~~F~R~G 344 (403)
|++...+..+|||||+|+|.-+...+.+.
T Consensus 318 G~p~~~~~~~GdL~v~~~v~~P~~l~~~q 346 (378)
T PRK14283 318 GMPSLRWSGKGNLYVKVKVVVPKKLSPKQ 346 (378)
T ss_pred CCCCCCCCCCCCEEEEEEEEeCCCCCHHH
Confidence 99865555689999999999555444333
No 83
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=2.9e-13 Score=132.89 Aligned_cols=69 Identities=45% Similarity=0.719 Sum_probs=65.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~ 147 (403)
+...|||.|||+.++|+..|||+|||++|+.+|||++.++ .+++.+|++|-+||.+|+||.+|..||..
T Consensus 370 SkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg 439 (486)
T KOG0550|consen 370 SKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG 439 (486)
T ss_pred hhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc
Confidence 4457999999999999999999999999999999999987 67899999999999999999999999986
No 84
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=4.5e-13 Score=132.90 Aligned_cols=67 Identities=36% Similarity=0.600 Sum_probs=64.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
..|+|.+|||++++|+++|||.||++|...|||||. .+.|+|.|+.++.|||+|+|+.+|..||...
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~ 300 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLEL 300 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence 469999999999999999999999999999999998 6899999999999999999999999999864
No 85
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=4.7e-13 Score=123.36 Aligned_cols=67 Identities=43% Similarity=0.759 Sum_probs=62.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
..|-|+||||+++|+.+||.+|||+||+++|||++++ +++.+.|..|.+||++|.|...|..||-..
T Consensus 32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHh
Confidence 4588999999999999999999999999999999986 667799999999999999999999999863
No 86
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.33 E-value=1.8e-12 Score=107.92 Aligned_cols=54 Identities=26% Similarity=0.433 Sum_probs=48.4
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhh
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~ 136 (403)
+...++|+||||+++|+.+|||++||+|++++|||+.++ .+.|++|++||++|.
T Consensus 62 Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs----~~~~~kIneAyevL~ 115 (116)
T PTZ00100 62 MSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS----TYIASKVNEAKDLLL 115 (116)
T ss_pred CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHh
Confidence 445799999999999999999999999999999998642 468899999999995
No 87
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.24 E-value=8.5e-12 Score=119.89 Aligned_cols=59 Identities=39% Similarity=0.605 Sum_probs=52.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---C----hhHHHHHHHHHHHHHHhhh
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---N----PSAKRKFQEIRDAYETLRD 137 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~---~----~~a~~~f~~i~~Ay~vL~d 137 (403)
+...++|++|||++++|.+|||+|||+|+++||||++.+ + +.++++|++|++||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 345799999999999999999999999999999999743 1 2478999999999999985
No 88
>PHA02624 large T antigen; Provisional
Probab=99.17 E-value=2.4e-11 Score=126.42 Aligned_cols=59 Identities=29% Similarity=0.566 Sum_probs=55.7
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhh
Q 015636 82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144 (403)
Q Consensus 82 ~~~Y~iLgv~~~a--s~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~y 144 (403)
.++|++|||+++| +.+|||+|||++|++||||++++ +++|++|++||++|+|+.+|..|
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----HHHHHHHHHHHHHHhcHHHhhhc
Confidence 5899999999999 99999999999999999999753 58999999999999999999998
No 89
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.13 E-value=1e-10 Score=105.08 Aligned_cols=67 Identities=27% Similarity=0.421 Sum_probs=58.2
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 82 ~~~Y~iLgv~~~--as~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
.|||++|||++. .+..+++++|++|++++|||+..+.+. +.+.-..||+||.+|+||.+|+.|=-..
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L 75 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIAL 75 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHh
Confidence 499999999985 899999999999999999999876553 3445679999999999999999996643
No 90
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.09 E-value=6.7e-11 Score=116.99 Aligned_cols=70 Identities=33% Similarity=0.640 Sum_probs=63.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----ChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccc
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-----NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR 150 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~-----~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~ 150 (403)
.-|||+|||++.+++..|||++||+|+.++||||.+. ..+-+|.+.+|++||+.|.|...|+.|-.||.-
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP 171 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP 171 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence 3599999999999999999999999999999999875 235788999999999999999999999999743
No 91
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=99.04 E-value=7e-11 Score=89.46 Aligned_cols=57 Identities=49% Similarity=1.036 Sum_probs=44.4
Q ss_pred cccCCCccccCCCccccCCCccceeEEEeC--------CccccCCcCCCCcEEe-eeeeeEEeece
Q 015636 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII-KDHCMTCKGSG 288 (403)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~-~~~C~~C~g~G 288 (403)
|+.|+|+|........+|+.|+|+|++.+. .++.+|+.|+|+|+++ +++|..|+|.|
T Consensus 1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g 66 (66)
T PF00684_consen 1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG 66 (66)
T ss_dssp -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence 899999999888899999999999997543 2478999999999999 99999999865
No 92
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.01 E-value=5.3e-10 Score=99.14 Aligned_cols=57 Identities=26% Similarity=0.435 Sum_probs=48.9
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 015636 93 NASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (403)
Q Consensus 93 ~as~~eIk~ayr~la~~~HPD~~~~~~-----~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~ 149 (403)
+.+..+|+++||+|++++|||+..+.. .+.+.|+.||+||++|+||.+|+.|+-...
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 357889999999999999999975533 266789999999999999999999998643
No 93
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.97 E-value=4.7e-10 Score=100.27 Aligned_cols=67 Identities=25% Similarity=0.518 Sum_probs=60.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 015636 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDR 146 (403)
Q Consensus 80 ~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~dp~~R~~yd~ 146 (403)
-.-|+|+||.|.|+.+.++||+.||+|+...|||+|+++ +.|...|..|..||..|-|+..|..-+.
T Consensus 51 fnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~~ 118 (250)
T KOG1150|consen 51 FNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCLD 118 (250)
T ss_pred cccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 456999999999999999999999999999999999988 5689999999999999999986655444
No 94
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=4.6e-09 Score=102.59 Aligned_cols=106 Identities=27% Similarity=0.575 Sum_probs=84.3
Q ss_pred eecccCCCccccCCCc----------cccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec-eEEeceE----
Q 015636 230 VPCDSCHGRGFPADAK----------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (403)
Q Consensus 230 ~~C~~C~G~G~~~~~~----------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (403)
..|+.|.|+|...... +..|..|+|+|... .....|..|.|.+++...+-.+.+++ |+..+.+
T Consensus 144 ~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~--~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~ 221 (337)
T KOG0712|consen 144 PKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETI--SLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFK 221 (337)
T ss_pred CCCCCCCCCCceeEEEeccccccccceeEeccCCCccccc--cccccCcccccchhhhhhheeeccccCCCcccceeeee
Confidence 3799999999765322 56899999999861 24789999999998877666666655 5544433
Q ss_pred ----------------------------------------------------------EEEEEeCCC--CCCCCEEEEcC
Q 015636 295 ----------------------------------------------------------EVKVTIPAG--VDSGDTIRVPE 314 (403)
Q Consensus 295 ----------------------------------------------------------~l~V~Ip~G--~~~G~~i~l~g 314 (403)
.+++.++|| +.+|+++++.|
T Consensus 222 geadea~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~ 301 (337)
T KOG0712|consen 222 GEADEAPGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEG 301 (337)
T ss_pred eeeeecCCCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecC
Confidence 678999999 99999999999
Q ss_pred CccCCCCCCCcccEEEEEEEEcCC
Q 015636 315 AGNAGGRGRQHGNLFIKLKVADDP 338 (403)
Q Consensus 315 ~G~~~~~g~~~GDL~v~i~v~~h~ 338 (403)
+||+..... .|||||.+.|+-++
T Consensus 302 ~gmp~~~~~-~g~lyi~~~v~fp~ 324 (337)
T KOG0712|consen 302 EGMPIFRNP-KGDLYIKFEVKFPK 324 (337)
T ss_pred CCcccccCC-CCcEEEEEEEEcCC
Confidence 999987555 99999999999554
No 95
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=98.85 E-value=3.4e-09 Score=83.52 Aligned_cols=74 Identities=30% Similarity=0.512 Sum_probs=56.4
Q ss_pred CceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeE
Q 015636 204 DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMT 283 (403)
Q Consensus 204 di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~ 283 (403)
|+..++.|+|.||+.|+++.+..-
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l-------------------------------------------------------- 24 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTL-------------------------------------------------------- 24 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-T--------------------------------------------------------
T ss_pred CeEEEEEeCHHHHhCCCEEEEECC--------------------------------------------------------
Confidence 578899999999999999887521
Q ss_pred EeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCC-CcccEEEEEEEEcCCCce
Q 015636 284 CKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGR-QHGNLFIKLKVADDPIFS 341 (403)
Q Consensus 284 C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~-~~GDL~v~i~v~~h~~F~ 341 (403)
.+ +.++|.||+|+++|++++++|+|++...+. .+|||||+++|.-+..++
T Consensus 25 -------~g-~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls 75 (81)
T PF01556_consen 25 -------DG-KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLS 75 (81)
T ss_dssp -------TS--EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTS
T ss_pred -------CC-CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCC
Confidence 12 568889999999999999999999865554 799999999999655543
No 96
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.71 E-value=9.8e-09 Score=95.84 Aligned_cols=74 Identities=34% Similarity=0.426 Sum_probs=63.9
Q ss_pred CCCCCCCCCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCCC--CChhHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 75 GSCYSSKRDPYELLGVPE---NASQDEIKKAFHMLAKQYHPDANK--NNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 75 ~~~~~~~~~~Y~iLgv~~---~as~~eIk~ayr~la~~~HPD~~~--~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
....+...|+|.+|||+. .|++.+|.+|.++.+.+||||+.. ++-...+.|+.|+.||+||+|+.+|..||..-
T Consensus 36 d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d 114 (379)
T COG5269 36 DFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSND 114 (379)
T ss_pred hhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence 345677789999999987 688999999999999999999872 23346789999999999999999999999863
No 97
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.57 E-value=4.2e-08 Score=95.69 Aligned_cols=83 Identities=20% Similarity=0.318 Sum_probs=68.1
Q ss_pred CCCCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 200 ~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
.+|.|+.+++.|+|.+|+.|+++.|..
T Consensus 198 R~G~DL~~~~~Isl~eAl~G~~~~v~t----------------------------------------------------- 224 (291)
T PRK14299 198 LEGDDLYATVDVPAPIAVVGGKVRVMT----------------------------------------------------- 224 (291)
T ss_pred EECCEEEEEEecCHHHHhCCCEEEEEC-----------------------------------------------------
Confidence 357899999999999999998776652
Q ss_pred eeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEE
Q 015636 280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (403)
Q Consensus 280 ~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~ 348 (403)
..+ .++|.||+|+++|++++|+|+|++.. ++..|||||+|+|..++.++.++.+|+
T Consensus 225 ----------ldG--~~~v~ip~~~~~g~~~rl~g~G~p~~-~~~~GDL~v~~~V~~P~~l~~~~~~~l 280 (291)
T PRK14299 225 ----------LDG--PVEVTIPPRTQAGRKLRLKGKGWPRG-PAGRGDQYAEVRITIPTRPTPEEERLY 280 (291)
T ss_pred ----------CCC--CEEEEeCCCcCCCCEEEECCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 122 36889999999999999999999863 456899999999999998888776654
No 98
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=98.38 E-value=3.8e-07 Score=75.61 Aligned_cols=57 Identities=39% Similarity=0.906 Sum_probs=46.5
Q ss_pred cceeecccCCCccccCCCccccCCCccceeEEEeC-----CccccCCcCCCCcEEeeeeeeEEeeceEEec
Q 015636 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (403)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~ 292 (403)
...+.|+.|+|+|. .+|+.|+|+|.+... +++.+|+.|.|.|+. .|..|.|.|++..
T Consensus 39 ~~~v~C~~C~GsG~------~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~~ 100 (111)
T PLN03165 39 ENTQPCFPCSGTGA------QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---TCTTCQGSGIQPR 100 (111)
T ss_pred ccCCCCCCCCCCCC------cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---eCCCCCCCEEEee
Confidence 34689999999997 389999999987542 236799999999975 5999999987653
No 99
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.37 E-value=8e-07 Score=87.37 Aligned_cols=77 Identities=27% Similarity=0.390 Sum_probs=63.0
Q ss_pred CCCCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 200 ~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
..|.|+++++.|+|.+|+.|+++.|...
T Consensus 206 r~g~DL~~~~~Isl~~al~G~~~~i~~~---------------------------------------------------- 233 (306)
T PRK10266 206 IVGQDLEIVVPLAPWEAALGAKVTVPTL---------------------------------------------------- 233 (306)
T ss_pred EeCCceEEEEecCHHHHhCCCEEEeeCC----------------------------------------------------
Confidence 3478999999999999999988777521
Q ss_pred eeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceee
Q 015636 280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD 343 (403)
Q Consensus 280 ~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~ 343 (403)
.+ .++|+||+|+.+|++++|+|+|++.. +..|||||+|+|..|+.+.-+
T Consensus 234 -----------~g--~v~v~ip~g~~~g~~~ri~g~G~p~~--~~~GdL~v~~~v~~P~~l~~~ 282 (306)
T PRK10266 234 -----------KE--SILLTIPPGSQAGQRLRVKGKGLVSK--KQTGDLYAVLKIVMPPKPDEK 282 (306)
T ss_pred -----------Cc--cEEEEeCCCcCCCCEEEECCCCCCCC--CCCCCEEEEEEEECCCCCCHH
Confidence 12 36899999999999999999999864 247999999999998875443
No 100
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.29 E-value=8.9e-07 Score=95.50 Aligned_cols=58 Identities=29% Similarity=0.477 Sum_probs=48.2
Q ss_pred CCCCCCCcccccCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhh
Q 015636 77 CYSSKRDPYELLGVPEN----ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (403)
Q Consensus 77 ~~~~~~~~Y~iLgv~~~----as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d 137 (403)
..+...+.|+||.|+-+ -..+.||++|++||.+||||||| +-.++|..||+|||.|+.
T Consensus 1276 ~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1276 ATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLSS 1337 (2235)
T ss_pred CccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHHH
Confidence 34456789999998753 23477999999999999999995 457999999999999983
No 101
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=1.2e-06 Score=80.23 Aligned_cols=56 Identities=38% Similarity=0.700 Sum_probs=50.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHH-Hhhhh
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYE-TLRDS 138 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~-vL~dp 138 (403)
..+|.+|||..+|+.+|++.||..||+++|||...+ ....++|.+|.+||. ||+..
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-~adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-EADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-cccHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999865 445579999999999 88754
No 102
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=98.01 E-value=5.1e-06 Score=65.38 Aligned_cols=45 Identities=31% Similarity=0.551 Sum_probs=35.3
Q ss_pred eEEEEeecCHhhhhcCCeEEeeCCCC-cEEEEEcCC----Ceeeeeeeee
Q 015636 346 DVYVDSNISFTQAILGGKVDVPTLSG-KVQVKVIVL----SLLLLLFYSL 390 (403)
Q Consensus 346 DL~~~~~Isl~eAllG~~~~I~tldG-~~~l~ip~~----~~~~~~~~~~ 390 (403)
||+++++|+++||++|++++|+|+|| .+.|+||+. ..+.+-..++
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~ 50 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGM 50 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESE
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCC
Confidence 89999999999999999999999999 799998873 4444444444
No 103
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=97.98 E-value=9.9e-06 Score=86.21 Aligned_cols=69 Identities=51% Similarity=0.833 Sum_probs=64.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g 151 (403)
.|||+||||+++|+.++||+|||+||++||||++++ +.+.++|++|++||++|+||.+|+.||.++..|
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG 70 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDG 70 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence 599999999999999999999999999999999976 778889999999999999999999999976543
No 104
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=97.93 E-value=6.9e-06 Score=74.39 Aligned_cols=46 Identities=37% Similarity=0.690 Sum_probs=29.9
Q ss_pred CCcCCCCcEEee--eeeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEc
Q 015636 267 CSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313 (403)
Q Consensus 267 C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~ 313 (403)
|+.|+|+|++++ ++|..|+|.|.+..++.+.+.+ .|+.+|++|++.
T Consensus 102 C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 102 CPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred CCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence 333333333333 3455555555566778888899 999999999875
No 105
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=97.82 E-value=9.4e-06 Score=61.35 Aligned_cols=44 Identities=32% Similarity=0.823 Sum_probs=32.4
Q ss_pred cceeecccCCCccccCCC---------ccccCCCccceeEEEeCCc-cccCCcCCCCc
Q 015636 227 DAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPF-TSTCSTCKGLG 274 (403)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~-~~~C~~C~G~G 274 (403)
.....|+.|+|+|..... ...+|+.|+|+|++ + ..+|+.|+|.|
T Consensus 13 ~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~----i~~~~C~~C~G~g 66 (66)
T PF00684_consen 13 KKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKI----IEKDPCKTCKGSG 66 (66)
T ss_dssp TT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-----TSSB-SSSTTSS
T ss_pred CCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeE----ECCCCCCCCCCcC
Confidence 345799999999986432 25789999999999 6 88999999986
No 106
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.78 E-value=3.8e-05 Score=62.34 Aligned_cols=59 Identities=27% Similarity=0.393 Sum_probs=48.2
Q ss_pred CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 015636 76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138 (403)
Q Consensus 76 ~~~~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp 138 (403)
.+.+..+.--.||||+++++.+.||+|+|+.....|||+.++ |-. =.+||||+++|...
T Consensus 50 ~~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGS-PYl---AsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 50 EPKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGS-PYL---ASKINEAKDLLEGT 108 (112)
T ss_pred ccccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCC-HHH---HHHHHHHHHHHhcc
Confidence 344556677889999999999999999999999999999975 421 13599999999743
No 107
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.65 E-value=6e-05 Score=65.40 Aligned_cols=67 Identities=25% Similarity=0.472 Sum_probs=53.9
Q ss_pred CCCcccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCC-----hhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 015636 81 KRDPYELLGVPE--NASQDEIKKAFHMLAKQYHPDANKNN-----PSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (403)
Q Consensus 81 ~~~~Y~iLgv~~--~as~~eIk~ayr~la~~~HPD~~~~~-----~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~ 147 (403)
..+||.++|... ..++.-++.-|--..+++|||+.... ..|.+...++|+||.+|.||.+|+.|=.-
T Consensus 7 ~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk 80 (168)
T KOG3192|consen 7 PSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLK 80 (168)
T ss_pred HHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 458999997654 55666677789999999999985432 13778899999999999999999999654
No 108
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=97.34 E-value=0.00012 Score=75.67 Aligned_cols=26 Identities=46% Similarity=1.069 Sum_probs=13.3
Q ss_pred cCCCccceeEEEeCCccccCCcCCCCcEE
Q 015636 248 ICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (403)
Q Consensus 248 ~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (403)
.|+.|.|.|.+. +..+|+.|+|+|++
T Consensus 55 pc~~c~gkG~V~---v~~~c~~c~G~gkv 80 (715)
T COG1107 55 PCPKCRGKGTVT---VYDTCPECGGTGKV 80 (715)
T ss_pred CCCeeccceeEE---EEeecccCCCceeE
Confidence 455555555542 23455555555554
No 109
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=96.92 E-value=0.00052 Score=57.04 Aligned_cols=41 Identities=34% Similarity=0.767 Sum_probs=33.2
Q ss_pred ecccCCCccccCCC------ccccCCCccceeEEEeCCccccCCcCCCCcEEee
Q 015636 231 PCDSCHGRGFPADA------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (403)
Q Consensus 231 ~C~~C~G~G~~~~~------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (403)
.|+.|+|+|..... .+.+|+.|+|+|+. .|..|.|+|.+.+
T Consensus 54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~-------~C~~C~G~G~~~~ 100 (111)
T PLN03165 54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL-------TCTTCQGSGIQPR 100 (111)
T ss_pred CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee-------eCCCCCCCEEEee
Confidence 89999999975321 15689999999975 4999999998754
No 110
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.67 E-value=0.0016 Score=58.74 Aligned_cols=69 Identities=32% Similarity=0.526 Sum_probs=54.1
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 015636 83 DPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (403)
Q Consensus 83 ~~Y~iLgv~~~a--s~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g 151 (403)
+++..+|..+.+ ..+.++..|+.+++.+|||+....+. +.+.+..++.||.+|.||.+|+.|=.....|
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g 77 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADG 77 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhccc
Confidence 456667776655 34559999999999999999876543 3457889999999999999999997654433
No 111
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=96.65 E-value=0.0021 Score=58.30 Aligned_cols=41 Identities=34% Similarity=0.595 Sum_probs=23.7
Q ss_pred ccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeeceE
Q 015636 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGV 289 (403)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~ 289 (403)
.+|+.|+|+|.+... ..+|+.|+|+|++....-......|+
T Consensus 100 ~~C~~C~G~G~~i~~--~~~C~~C~G~G~v~~~~~~~~k~~g~ 140 (186)
T TIGR02642 100 CKCPRCRGTGLIQRR--QRECDTCAGTGRFRPTVEDLLKSFGV 140 (186)
T ss_pred CcCCCCCCeeEEecC--CCCCCCCCCccEEeeeEEEEEEeeec
Confidence 456666666665211 15688888888776555554444454
No 112
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=96.59 E-value=0.0017 Score=67.39 Aligned_cols=62 Identities=31% Similarity=0.695 Sum_probs=42.2
Q ss_pred eecccCCCccccCCCccccCCCccceeEEEeC-----------------CccccCCcCCCCcEEe-eeeeeEEeeceEEe
Q 015636 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP-----------------PFTSTCSTCKGLGRII-KDHCMTCKGSGVVD 291 (403)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-----------------~~~~~C~~C~G~G~~~-~~~C~~C~g~G~~~ 291 (403)
..|+.|+|.|... .....|+.|+|+|..-.. .+..+|+.|.|+|.+. -..|.+|.|.|-+.
T Consensus 3 ~~C~~C~g~G~i~-v~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gkv~ 81 (715)
T COG1107 3 KKCPECGGKGKIV-VGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGKVL 81 (715)
T ss_pred ccccccCCCceEe-eeeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCceeEE
Confidence 4688888888643 234568888888865210 1245888888888875 57888888876544
Q ss_pred c
Q 015636 292 G 292 (403)
Q Consensus 292 ~ 292 (403)
.
T Consensus 82 ~ 82 (715)
T COG1107 82 T 82 (715)
T ss_pred e
Confidence 3
No 113
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=96.43 E-value=0.0026 Score=61.40 Aligned_cols=61 Identities=33% Similarity=0.766 Sum_probs=37.9
Q ss_pred eeecccCCCccccC--CCcc-----------------ccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeeceE
Q 015636 229 FVPCDSCHGRGFPA--DAKT-----------------KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGV 289 (403)
Q Consensus 229 ~~~C~~C~G~G~~~--~~~~-----------------~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~ 289 (403)
.+.|+.|+|.|.-. ...+ ..|..|+|+|.. +|++|.|+|. .+|.+|+|.|-
T Consensus 198 ~~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k~gt~~~C~~C~G~G~~-------~C~tC~grG~---k~C~TC~gtgs 267 (406)
T KOG2813|consen 198 AMVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPKIGTHDLCYMCHGRGIK-------ECHTCKGRGK---KPCTTCSGTGS 267 (406)
T ss_pred ceeccCcCCCCccccccCcceecccccCCCCCCCCccchhhhccCCCcc-------cCCcccCCCC---cccccccCccc
Confidence 46788888887321 1112 345555555543 6777777775 57999999877
Q ss_pred EeceEEEEEE
Q 015636 290 VDGVKEVKVT 299 (403)
Q Consensus 290 ~~~~~~l~V~ 299 (403)
+..-..+.|.
T Consensus 268 ll~~t~~vV~ 277 (406)
T KOG2813|consen 268 LLNYTRIVVY 277 (406)
T ss_pred eeeeEEEEEE
Confidence 6655555444
No 114
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.17 E-value=0.0026 Score=57.48 Aligned_cols=54 Identities=43% Similarity=0.632 Sum_probs=46.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--Ch-----hHHHHHHHHHHHHHHh
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN--NP-----SAKRKFQEIRDAYETL 135 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~--~~-----~a~~~f~~i~~Ay~vL 135 (403)
.+.|.+|++...++..+|+++|+++....|||+-.. .+ .+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999999997532 12 3778899999999854
No 115
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=95.05 E-value=0.025 Score=58.51 Aligned_cols=47 Identities=19% Similarity=0.420 Sum_probs=35.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh-------HHHHHHHHHHHHHHh
Q 015636 89 GVPENASQDEIKKAFHMLAKQYHPDANKNNPS-------AKRKFQEIRDAYETL 135 (403)
Q Consensus 89 gv~~~as~~eIk~ayr~la~~~HPD~~~~~~~-------a~~~f~~i~~Ay~vL 135 (403)
.+..=.+.++|||+|||..+..||||.+..+. +++.|..+++||+.-
T Consensus 395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 34445688999999999999999999876532 566677777777643
No 116
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=93.95 E-value=0.024 Score=54.84 Aligned_cols=38 Identities=45% Similarity=1.078 Sum_probs=30.5
Q ss_pred ceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEee
Q 015636 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (403)
....|.-|+|.| ...|++|.|.|.. +|.+|.|.|....
T Consensus 233 t~~~C~~C~G~G------~~~C~tC~grG~k-------~C~TC~gtgsll~ 270 (406)
T KOG2813|consen 233 THDLCYMCHGRG------IKECHTCKGRGKK-------PCTTCSGTGSLLN 270 (406)
T ss_pred ccchhhhccCCC------cccCCcccCCCCc-------ccccccCccceee
Confidence 345677777777 4579999999976 8999999998654
No 117
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=93.02 E-value=0.19 Score=49.06 Aligned_cols=90 Identities=20% Similarity=0.349 Sum_probs=58.1
Q ss_pred eccccceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEE
Q 015636 223 HVSFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK 297 (403)
Q Consensus 223 ~v~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~ 297 (403)
.........|..|.|.|.... -...+|..|.|.|.+ ....|..|.|.|.+...+-.....+..+....+|+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~----~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~ 250 (288)
T KOG0715|consen 175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLV----LRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLR 250 (288)
T ss_pred cccccccccchhhhCcccccccccCCcceeeccccccccee----ccchHHHhhcchhhhhheeEEeecCcccccccEEE
Confidence 334567789999999993221 112379999999998 55569999999977766666666664444444555
Q ss_pred EEeCCCCCCCCEEEEcCCccC
Q 015636 298 VTIPAGVDSGDTIRVPEAGNA 318 (403)
Q Consensus 298 V~Ip~G~~~G~~i~l~g~G~~ 318 (403)
+..+... .-.+++.=...+
T Consensus 251 ~~~~~~~--~l~v~~~v~~~~ 269 (288)
T KOG0715|consen 251 FAGHGND--DLFVRLIVAKSP 269 (288)
T ss_pred EecCCcc--eEEEEEEeccCc
Confidence 5544433 333444433433
No 118
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=92.48 E-value=0.33 Score=41.43 Aligned_cols=60 Identities=23% Similarity=0.272 Sum_probs=41.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhh
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~ 142 (403)
+....-..||+|++..+.++|.+.|.+|-...+|++.++ . =.=.+|..|.|.|....+..
T Consensus 55 Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS-f---YLQSKV~rAKErl~~El~~~ 114 (127)
T PF03656_consen 55 MTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS-F---YLQSKVFRAKERLEQELKEE 114 (127)
T ss_dssp --HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS--H---HHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC-H---HHHHHHHHHHHHHHHHHHHH
Confidence 334567899999999999999999999999999998764 1 11136888999998666443
No 119
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=85.22 E-value=2.4 Score=38.90 Aligned_cols=40 Identities=33% Similarity=0.483 Sum_probs=31.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHH-hhhh
Q 015636 91 PENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYET-LRDS 138 (403)
Q Consensus 91 ~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~v-L~dp 138 (403)
+++||.+||.+|+.++..+|- +| ++.-.+|..|||. |++.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~-----gd---~~~~~~IEaAYD~ILM~r 41 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYA-----GD---EKSREAIEAAYDAILMER 41 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhc-----CC---HHHHHHHHHHHHHHHHHH
Confidence 479999999999999999983 23 3455679999995 4444
No 120
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=84.29 E-value=0.74 Score=44.11 Aligned_cols=41 Identities=32% Similarity=0.622 Sum_probs=25.0
Q ss_pred eecccCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEE
Q 015636 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRI 276 (403)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~ 276 (403)
-.|..|.|-++. .|..|+|+=++... ..-.+|..|+-.|-+
T Consensus 230 ~~C~~CGg~rFl------pC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLv 274 (281)
T KOG2824|consen 230 GVCESCGGARFL------PCSNCHGSCKVHEEEEDDGGVLRCLECNENGLV 274 (281)
T ss_pred CcCCCcCCcceE------ecCCCCCceeeeeeccCCCcEEECcccCCCCce
Confidence 457777776653 57777777766431 113467777777765
No 121
>smart00709 Zpr1 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins.
Probab=83.23 E-value=1.5 Score=39.04 Aligned_cols=20 Identities=30% Similarity=0.393 Sum_probs=16.2
Q ss_pred EEEEEeCCCCCCCCEEEEcC
Q 015636 295 EVKVTIPAGVDSGDTIRVPE 314 (403)
Q Consensus 295 ~l~V~Ip~G~~~G~~i~l~g 314 (403)
.+.++||||...|..-.+.|
T Consensus 81 El~~ei~pg~~~g~itTVEG 100 (160)
T smart00709 81 ELDLEIPPGPLGGFITTVEG 100 (160)
T ss_pred eeeEEecCCCCCcEEEehHH
Confidence 67788888888888888865
No 122
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=81.64 E-value=3.4 Score=34.50 Aligned_cols=46 Identities=17% Similarity=0.351 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCChh----HHHHHHHHHHHHHHhhh
Q 015636 92 ENASQDEIKKAFHMLAKQYHPDANKNNPS----AKRKFQEIRDAYETLRD 137 (403)
Q Consensus 92 ~~as~~eIk~ayr~la~~~HPD~~~~~~~----a~~~f~~i~~Ay~vL~d 137 (403)
+..+..+++.|.|.+-++.|||.....|+ .++-++.++.-.+.|..
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~ 53 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK 53 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence 45567789999999999999998887775 34456777766666654
No 123
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=79.61 E-value=1.1 Score=39.34 Aligned_cols=24 Identities=38% Similarity=0.823 Sum_probs=16.8
Q ss_pred eecccCCCccccCCCccccCCCccceeEEE
Q 015636 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVT 259 (403)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~ 259 (403)
..|..|.|.++. .|..|+|+=++.
T Consensus 100 ~~C~~Cgg~rfv------~C~~C~Gs~k~~ 123 (147)
T cd03031 100 GVCEGCGGARFV------PCSECNGSCKVF 123 (147)
T ss_pred CCCCCCCCcCeE------ECCCCCCcceEE
Confidence 458888877754 677777777664
No 124
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=78.37 E-value=1.2 Score=50.41 Aligned_cols=32 Identities=28% Similarity=0.590 Sum_probs=23.7
Q ss_pred ccCCCccceeEEEeC-----CccccCCcCCCCcEEee
Q 015636 247 KICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIK 278 (403)
Q Consensus 247 ~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~ 278 (403)
-.|+.|.|.|.+.+. .+..+|+.|+|+++..+
T Consensus 737 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e 773 (924)
T TIGR00630 737 GRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRE 773 (924)
T ss_pred CCCCCCccceEEEEEccCCCCcccCCCCcCCceeChH
Confidence 459999999987643 24678999998887543
No 125
>PF13446 RPT: A repeated domain in UCH-protein
Probab=76.91 E-value=4.1 Score=29.91 Aligned_cols=45 Identities=27% Similarity=0.568 Sum_probs=33.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhh
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d 137 (403)
.+-|+.|||+++++.+.|-.+|+..... +| .......+|..++.+
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~~--------~P---~~~~~~r~AL~~Ia~ 49 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVND--------DP---SQKDTLREALRVIAE 49 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHHc--------Ch---HhHHHHHHHHHHHHH
Confidence 3569999999999999999999988771 22 233445666666654
No 126
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=76.70 E-value=2.5 Score=41.93 Aligned_cols=54 Identities=30% Similarity=0.442 Sum_probs=42.2
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCC----ChhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 015636 94 ASQDEIKKAFHMLAKQYHPDANKN----NPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (403)
Q Consensus 94 as~~eIk~ayr~la~~~HPD~~~~----~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~ 147 (403)
++..+|+.+|+..+...||++... ....++.|+.|.+||++|++..+|...|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 567889999999999999998741 123567799999999999986655555543
No 127
>TIGR00310 ZPR1_znf ZPR1 zinc finger domain.
Probab=75.51 E-value=5.1 Score=36.77 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=16.2
Q ss_pred EEEEEeCCC-CCCCCEEEEcC
Q 015636 295 EVKVTIPAG-VDSGDTIRVPE 314 (403)
Q Consensus 295 ~l~V~Ip~G-~~~G~~i~l~g 314 (403)
.+.++|||| +..|..-.+.|
T Consensus 80 El~lei~pg~~~~G~iTTVEG 100 (192)
T TIGR00310 80 ELGLDIEPGPTSGGFITNLEG 100 (192)
T ss_pred ceEEEECCCccCCceEEeeHh
Confidence 677888898 68888888865
No 128
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=74.40 E-value=2.3 Score=40.83 Aligned_cols=37 Identities=30% Similarity=0.881 Sum_probs=30.9
Q ss_pred ccCCCccceeEEEeCCccccCCcCCCCcEEee--------eeeeEEeeceEE
Q 015636 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK--------DHCMTCKGSGVV 290 (403)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~--------~~C~~C~g~G~~ 290 (403)
..|..|+|.+.+ +|..|+|+-++.. .+|..|+=.|.+
T Consensus 230 ~~C~~CGg~rFl-------pC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLv 274 (281)
T KOG2824|consen 230 GVCESCGGARFL-------PCSNCHGSCKVHEEEEDDGGVLRCLECNENGLV 274 (281)
T ss_pred CcCCCcCCcceE-------ecCCCCCceeeeeeccCCCcEEECcccCCCCce
Confidence 479999999987 7999999988875 689999877765
No 129
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=73.44 E-value=2.8 Score=36.79 Aligned_cols=37 Identities=32% Similarity=0.836 Sum_probs=25.8
Q ss_pred ccCCCccceeEEEeCCccccCCcCCCCcEEee---------eeeeEEeeceEE
Q 015636 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK---------DHCMTCKGSGVV 290 (403)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~---------~~C~~C~g~G~~ 290 (403)
..|..|+|.+.+ +|..|+|+-++.. .+|..|+=.|.+
T Consensus 100 ~~C~~Cgg~rfv-------~C~~C~Gs~k~~~~~~~~~~~~~rC~~Cnengl~ 145 (147)
T cd03031 100 GVCEGCGGARFV-------PCSECNGSCKVFAENATAAGGFLRCPECNENGLV 145 (147)
T ss_pred CCCCCCCCcCeE-------ECCCCCCcceEEeccCcccccEEECCCCCccccc
Confidence 458888888876 7888888877642 367777655543
No 130
>PRK14714 DNA polymerase II large subunit; Provisional
Probab=72.24 E-value=1.6 Score=49.91 Aligned_cols=64 Identities=17% Similarity=0.289 Sum_probs=37.7
Q ss_pred CcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcE---EeeeeeeEEeeceEEece
Q 015636 219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR---IIKDHCMTCKGSGVVDGV 293 (403)
Q Consensus 219 G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~---~~~~~C~~C~g~G~~~~~ 293 (403)
+....+.+. ...||.|+..... ..|+.|+..-.. ...|+.|+..=. .....|+.|..+-+....
T Consensus 658 ~G~ieVEV~-~rkCPkCG~~t~~-----~fCP~CGs~te~-----vy~CPsCGaev~~des~a~~CP~CGtplv~~~~ 724 (1337)
T PRK14714 658 GGVIEVEVG-RRRCPSCGTETYE-----NRCPDCGTHTEP-----VYVCPDCGAEVPPDESGRVECPRCDVELTPYQR 724 (1337)
T ss_pred CCeEEEEEE-EEECCCCCCcccc-----ccCcccCCcCCC-----ceeCccCCCccCCCccccccCCCCCCcccccce
Confidence 333344433 5789999876432 389999876422 237888887410 113478888876443333
No 131
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=71.98 E-value=2.8 Score=47.54 Aligned_cols=33 Identities=27% Similarity=0.575 Sum_probs=24.3
Q ss_pred ccCCCccceeEEEeC-----CccccCCcCCCCcEEeee
Q 015636 247 KICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 247 ~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~~ 279 (403)
-.|+.|.|.|.+... .+..+|+.|+|+....+.
T Consensus 739 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~ 776 (943)
T PRK00349 739 GRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRET 776 (943)
T ss_pred CCCCcccccceEEEEeccCCCccccCccccCccccccc
Confidence 459999999987643 246789999998876543
No 132
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=64.24 E-value=4 Score=49.18 Aligned_cols=31 Identities=32% Similarity=0.566 Sum_probs=24.2
Q ss_pred cCCCccceeEEEeC-----CccccCCcCCCCcEEee
Q 015636 248 ICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIK 278 (403)
Q Consensus 248 ~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~ 278 (403)
.|+.|+|.|.+.+. .+..+|+.|+|+.+..+
T Consensus 1609 rC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~~~e 1644 (1809)
T PRK00635 1609 QCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRIQPL 1644 (1809)
T ss_pred CCCCCccCceEEEecccCCCcccCCCCCCCcCCCHH
Confidence 59999999987543 34779999999987543
No 133
>TIGR00340 zpr1_rel ZPR1-related zinc finger protein. A model ZPR1_znf (TIGR00310) has been created to describe the domain shared by this protein and ZPR1.
Probab=62.86 E-value=11 Score=33.68 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=15.0
Q ss_pred EEEEEeCCCC-CCCCEEEEcC
Q 015636 295 EVKVTIPAGV-DSGDTIRVPE 314 (403)
Q Consensus 295 ~l~V~Ip~G~-~~G~~i~l~g 314 (403)
++.++||||. ..|..-++.|
T Consensus 78 El~lei~pg~~~~G~iTTVEG 98 (163)
T TIGR00340 78 ELGIKIEPGPASQGYISNIEG 98 (163)
T ss_pred ceeEEecCCCcCCceEEehHh
Confidence 5778888887 6777777755
No 134
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=61.19 E-value=14 Score=33.61 Aligned_cols=45 Identities=24% Similarity=0.194 Sum_probs=37.0
Q ss_pred eeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCCCeeeee
Q 015636 342 RDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVLSLLLLL 386 (403)
Q Consensus 342 R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~~~~~~~ 386 (403)
|--.||.+++-++=.|-.-||+..|..+.|..+||+|++++.++-
T Consensus 113 ~lrtdls~tlfl~DPedYdGGeLVv~dtYg~h~VklPAGdLVlyp 157 (229)
T COG3128 113 RLRTDLSCTLFLSDPEDYDGGELVVNDTYGNHRVKLPAGDLVLYP 157 (229)
T ss_pred eeEeeeeeeeecCCccccCCceEEEeccccceEEeccCCCEEEcc
Confidence 445577777777777888999999999999999999999887654
No 135
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=60.96 E-value=6.5 Score=43.45 Aligned_cols=37 Identities=22% Similarity=0.459 Sum_probs=25.9
Q ss_pred ccCCCccceeEEEeC-----CccccCCcCCCCcEEeeeeeeE
Q 015636 247 KICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIKDHCMT 283 (403)
Q Consensus 247 ~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~~~C~~ 283 (403)
-.|..|.|.|.+.+. .+-.+|+.|+|+.+..+..-..
T Consensus 731 GRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRYn~EtLev~ 772 (935)
T COG0178 731 GRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRYNRETLEVK 772 (935)
T ss_pred cCCccccCCceEEEEeccCCCceeeCCCcCCcccccceEEEE
Confidence 469999999987543 2467899999988755443333
No 136
>PRK04023 DNA polymerase II large subunit; Validated
Probab=60.42 E-value=3.2 Score=46.54 Aligned_cols=64 Identities=23% Similarity=0.363 Sum_probs=40.9
Q ss_pred eeecccc-CcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeece
Q 015636 212 SFAEAAK-GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSG 288 (403)
Q Consensus 212 tlee~~~-G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G 288 (403)
++.+|+. +....+.+. ...|+.|+-.+ ....|+.|+..-. ....|+.|+-... ...|+.|...-
T Consensus 609 ~i~~A~~~~g~~eVEVg-~RfCpsCG~~t-----~~frCP~CG~~Te-----~i~fCP~CG~~~~--~y~CPKCG~El 673 (1121)
T PRK04023 609 DINKAAKYKGTIEVEIG-RRKCPSCGKET-----FYRRCPFCGTHTE-----PVYRCPRCGIEVE--EDECEKCGREP 673 (1121)
T ss_pred cHHHHHhcCCceeeccc-CccCCCCCCcC-----CcccCCCCCCCCC-----cceeCccccCcCC--CCcCCCCCCCC
Confidence 3566666 455555543 45799998765 2468999987621 2347888854432 36699998763
No 137
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=56.45 E-value=5.9 Score=20.35 Aligned_cols=13 Identities=46% Similarity=0.991 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHhh
Q 015636 124 KFQEIRDAYETLR 136 (403)
Q Consensus 124 ~f~~i~~Ay~vL~ 136 (403)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 5788999998874
No 138
>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
Probab=55.76 E-value=7.4 Score=42.85 Aligned_cols=51 Identities=18% Similarity=0.400 Sum_probs=36.3
Q ss_pred ceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec
Q 015636 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (403)
....|..|+- ...||.|...=......-+-.|..|+-. ..+...|+.|.+.
T Consensus 434 ~~l~C~~Cg~--------v~~Cp~Cd~~lt~H~~~~~L~CH~Cg~~-~~~p~~Cp~Cgs~ 484 (730)
T COG1198 434 PLLLCRDCGY--------IAECPNCDSPLTLHKATGQLRCHYCGYQ-EPIPQSCPECGSE 484 (730)
T ss_pred ceeecccCCC--------cccCCCCCcceEEecCCCeeEeCCCCCC-CCCCCCCCCCCCC
Confidence 3578999964 3589999876444333346689999877 5567789999865
No 139
>PF03833 PolC_DP2: DNA polymerase II large subunit DP2; InterPro: IPR016033 DP2 is the large subunit of a two-subunit novel archaebacterial replicative DNA polymerase first characterised for Pyrococcus furiosus. The structure of DP2 appears to be organised as a ~950 residue component separated from a ~300 residue component by a ~150 residue intein. The other subunit, DP1, has sequence similarity to the eukaryotic DNA polymerase delta small subunit. This entry represents the N-terminal ~950 residue component of DP2.; GO: 0003887 DNA-directed DNA polymerase activity; PDB: 3O59_X.
Probab=54.53 E-value=4.1 Score=44.93 Aligned_cols=54 Identities=19% Similarity=0.424 Sum_probs=0.0
Q ss_pred eeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeeceEEeceE
Q 015636 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVK 294 (403)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~ 294 (403)
...|+.|.-.+. ...|+.|++.-.. .-.|+.|+-. +..+.|+.|.........+
T Consensus 655 ~r~Cp~Cg~~t~-----~~~Cp~CG~~T~~-----~~~Cp~C~~~--~~~~~C~~C~~~~~~~~~~ 708 (900)
T PF03833_consen 655 RRRCPKCGKETF-----YNRCPECGSHTEP-----VYVCPDCGIE--VEEDECPKCGRETTSYSKQ 708 (900)
T ss_dssp ------------------------------------------------------------------
T ss_pred cccCcccCCcch-----hhcCcccCCcccc-----ceeccccccc--cCccccccccccCccccee
Confidence 457888876543 3578888775442 3468888753 3456899998774433333
No 140
>PRK03564 formate dehydrogenase accessory protein FdhE; Provisional
Probab=53.09 E-value=12 Score=36.85 Aligned_cols=42 Identities=19% Similarity=0.358 Sum_probs=23.2
Q ss_pred ceeecccCCCcc--------ccCCCccccCCCccceeEEEeCCccccCCcCCCC
Q 015636 228 AFVPCDSCHGRG--------FPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGL 273 (403)
Q Consensus 228 ~~~~C~~C~G~G--------~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~ 273 (403)
....||.|++.= ...+.+.-.|..|+..=.. .+..|+.|+-.
T Consensus 186 ~~~~CPvCGs~P~~s~v~~~~~~G~RyL~CslC~teW~~----~R~~C~~Cg~~ 235 (309)
T PRK03564 186 QRQFCPVCGSMPVSSVVQIGTTQGLRYLHCNLCESEWHV----VRVKCSNCEQS 235 (309)
T ss_pred CCCCCCCCCCcchhheeeccCCCCceEEEcCCCCCcccc----cCccCCCCCCC
Confidence 346788887741 1223345567766554433 35566666643
No 141
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=51.68 E-value=82 Score=24.38 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=34.9
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHH----HHHHHHHHhhh
Q 015636 85 YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQ----EIRDAYETLRD 137 (403)
Q Consensus 85 Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~----~i~~Ay~vL~d 137 (403)
-.+.|+.|-|+.+||..|-.+.++|.-=-..+. ....+.|. +|..|-.-|.|
T Consensus 6 ~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps-~an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 6 KTLRNFEPPATDEEIRAAALQYVRKVSGFRKPS-AANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcc-hhhHHHHHHHHHHHHHHHHHHHH
Confidence 345688899999999999999999986444442 23345554 45555444443
No 142
>PF08792 A2L_zn_ribbon: A2L zinc ribbon domain; InterPro: IPR014900 This zinc ribbon protein is found associated with some viral A2L transcription factors [].
Probab=49.13 E-value=10 Score=24.41 Aligned_cols=23 Identities=26% Similarity=0.819 Sum_probs=11.1
Q ss_pred eecccCCCcccc-CCCccccCCCc
Q 015636 230 VPCDSCHGRGFP-ADAKTKICSTC 252 (403)
Q Consensus 230 ~~C~~C~G~G~~-~~~~~~~C~~C 252 (403)
..|..|++.|.. .......|..|
T Consensus 4 ~~C~~C~~~~i~~~~~~~~~C~~C 27 (33)
T PF08792_consen 4 KKCSKCGGNGIVNKEDDYEVCIFC 27 (33)
T ss_pred eEcCCCCCCeEEEecCCeEEcccC
Confidence 345555555544 33334444444
No 143
>PF03367 zf-ZPR1: ZPR1 zinc-finger domain; InterPro: IPR004457 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents ZPR1-type zinc finger domains. An orthologous protein found once in each of the completed archaeal genomes corresponds to a zinc finger-containing domain repeated as the N-terminal and C-terminal halves of the mouse protein ZPR1. ZPR1 is an experimentally proven zinc-binding protein that binds the tyrosine kinase domain of the epidermal growth factor receptor (EGFR); binding is inhibited by EGF stimulation and tyrosine phosphorylation, and activation by EGF is followed by some redistribution of ZPR1 to the nucleus. By analogy, other proteins with the ZPR1 zinc finger domain may be regulatory proteins that sense protein phosphorylation state and/or participate in signal transduction (see also IPR004470 from INTERPRO). Deficiencies in ZPR1 may contribute to neurodegenerative disorders. ZPR1 appears to be down-regulated in patients with spinal muscular atrophy (SMA), a disease characterised by degeneration of the alpha-motor neurons in the spinal cord that can arise from mutations affecting the expression of Survival Motor Neurons (SMN) []. ZPR1 interacts with complexes formed by SMN [], and may act as a modifier that effects the severity of SMA. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 2QKD_A.
Probab=47.43 E-value=10 Score=33.77 Aligned_cols=28 Identities=29% Similarity=0.710 Sum_probs=13.9
Q ss_pred cCCCccceeEEEeC----C-c------cccCCcCCCCcE
Q 015636 248 ICSTCRGIGRVTIP----P-F------TSTCSTCKGLGR 275 (403)
Q Consensus 248 ~C~~C~G~G~~~~~----~-~------~~~C~~C~G~G~ 275 (403)
.|+.|+..|...+. | + ...|+.|+-+-.
T Consensus 3 ~Cp~C~~~~~~~~~~~~IP~F~evii~sf~C~~CGyk~~ 41 (161)
T PF03367_consen 3 LCPNCGENGTTRILLTDIPYFKEVIIMSFECEHCGYKNN 41 (161)
T ss_dssp E-TTTSSCCEEEEEEEEETTTEEEEEEEEE-TTT--EEE
T ss_pred cCCCCCCCcEEEEEEEcCCCCceEEEEEeECCCCCCEee
Confidence 57777777754322 2 1 457888876543
No 144
>PRK05978 hypothetical protein; Provisional
Probab=47.24 E-value=9.1 Score=33.59 Aligned_cols=8 Identities=25% Similarity=0.991 Sum_probs=3.8
Q ss_pred cccCCcCC
Q 015636 264 TSTCSTCK 271 (403)
Q Consensus 264 ~~~C~~C~ 271 (403)
...|+.|+
T Consensus 52 ~~~C~~CG 59 (148)
T PRK05978 52 VDHCAACG 59 (148)
T ss_pred CCCccccC
Confidence 34455553
No 145
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=45.73 E-value=95 Score=23.89 Aligned_cols=44 Identities=14% Similarity=0.224 Sum_probs=31.4
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 015636 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQE 127 (403)
Q Consensus 83 ~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~ 127 (403)
|--+++|++|-|+..||+.|-++.++|+.=-..++ ...++.|..
T Consensus 4 NIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS-~~n~~AFe~ 47 (88)
T COG5552 4 NIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPS-AANAEAFEA 47 (88)
T ss_pred chHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcc-hhhHHHHHH
Confidence 44577899999999999999988888875444442 223455553
No 146
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=45.14 E-value=8 Score=43.89 Aligned_cols=29 Identities=31% Similarity=0.621 Sum_probs=24.5
Q ss_pred ccCCcCCCCcEEe---------eeeeeEEeeceEEece
Q 015636 265 STCSTCKGLGRII---------KDHCMTCKGSGVVDGV 293 (403)
Q Consensus 265 ~~C~~C~G~G~~~---------~~~C~~C~g~G~~~~~ 293 (403)
-.|+.|.|.|++. ...|..|+|.....+.
T Consensus 737 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~ 774 (924)
T TIGR00630 737 GRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRET 774 (924)
T ss_pred CCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHH
Confidence 4699999999986 5699999999886664
No 147
>PF14353 CpXC: CpXC protein
Probab=45.03 E-value=18 Score=30.54 Aligned_cols=12 Identities=33% Similarity=0.584 Sum_probs=9.0
Q ss_pred cccCCcCCCCcE
Q 015636 264 TSTCSTCKGLGR 275 (403)
Q Consensus 264 ~~~C~~C~G~G~ 275 (403)
..+|+.|+....
T Consensus 38 ~~~CP~Cg~~~~ 49 (128)
T PF14353_consen 38 SFTCPSCGHKFR 49 (128)
T ss_pred EEECCCCCCcee
Confidence 567888887765
No 148
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=44.02 E-value=11 Score=40.97 Aligned_cols=49 Identities=18% Similarity=0.529 Sum_probs=30.4
Q ss_pred eecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec
Q 015636 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (403)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (403)
..||.|+-. ......-|+.|+..-. ...|+.|+-.=..-...|..|.-.
T Consensus 2 ~~Cp~Cg~~---n~~~akFC~~CG~~l~------~~~Cp~CG~~~~~~~~fC~~CG~~ 50 (645)
T PRK14559 2 LICPQCQFE---NPNNNRFCQKCGTSLT------HKPCPQCGTEVPVDEAHCPNCGAE 50 (645)
T ss_pred CcCCCCCCc---CCCCCccccccCCCCC------CCcCCCCCCCCCcccccccccCCc
Confidence 468888653 2223456888854321 246888876644445788888765
No 149
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=43.74 E-value=24 Score=30.07 Aligned_cols=23 Identities=22% Similarity=0.354 Sum_probs=17.1
Q ss_pred eEEEEEEeCCCCCCCCEEEEcCC
Q 015636 293 VKEVKVTIPAGVDSGDTIRVPEA 315 (403)
Q Consensus 293 ~~~l~V~Ip~G~~~G~~i~l~g~ 315 (403)
...+++.-+.+.+.||.+.+.-+
T Consensus 41 ~~~~~~~~~~~~~~GD~V~v~i~ 63 (135)
T PF04246_consen 41 PITFRAPNPIGAKVGDRVEVEIP 63 (135)
T ss_pred cEEEEecCCCCCCCCCEEEEEec
Confidence 35677777788999998887543
No 150
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=42.04 E-value=54 Score=31.98 Aligned_cols=59 Identities=25% Similarity=0.333 Sum_probs=40.2
Q ss_pred CCCCCCCCEEEEcC-CccCCCCCCCcccEEEEEEEEcCCCceee---------CCeEEEEeecCHhhhhcCCe
Q 015636 301 PAGVDSGDTIRVPE-AGNAGGRGRQHGNLFIKLKVADDPIFSRD---------GADVYVDSNISFTQAILGGK 363 (403)
Q Consensus 301 p~G~~~G~~i~l~g-~G~~~~~g~~~GDL~v~i~v~~h~~F~R~---------G~DL~~~~~Isl~eAllG~~ 363 (403)
+-|.++|+.++|.+ +||+..++.. ..+|+++.+..|+-. ..-+.+.+++++..|.+|+-
T Consensus 186 ~h~l~~gd~V~f~ev~gm~~lN~~~----~~~v~~~~~~~f~i~d~~~~~~y~~gG~~~qvK~~~~~~~~g~~ 254 (286)
T cd01491 186 RHGFEDGDYVTFSEVEGMTELNGCE----PRKIKVKGPYTFSIGDTSSFSEYIRGGIVTQVKLSPMAAFFGGL 254 (286)
T ss_pred ccCCcCCCEEEEeccCcchhhCCCc----cEEEEECCCCeEEECcCcCcCccccCcEEEEEecccHHHHhhhH
Confidence 56899999999988 7887665543 356777765556532 12356666777777777753
No 151
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=41.61 E-value=13 Score=35.22 Aligned_cols=12 Identities=50% Similarity=1.262 Sum_probs=6.7
Q ss_pred ccCCCccceeEE
Q 015636 247 KICSTCRGIGRV 258 (403)
Q Consensus 247 ~~C~~C~G~G~~ 258 (403)
.+||+|.|+|++
T Consensus 39 vtCPTCqGtGrI 50 (238)
T PF07092_consen 39 VTCPTCQGTGRI 50 (238)
T ss_pred CcCCCCcCCccC
Confidence 356666666654
No 152
>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=41.36 E-value=16 Score=30.37 Aligned_cols=27 Identities=19% Similarity=0.565 Sum_probs=15.2
Q ss_pred cceeecccCCCccccCCCccccCCCcc
Q 015636 227 DAFVPCDSCHGRGFPADAKTKICSTCR 253 (403)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~ 253 (403)
..+..|+.|.-.=+--+..+.+||.|+
T Consensus 7 GtKR~Cp~CG~kFYDLnk~PivCP~CG 33 (108)
T PF09538_consen 7 GTKRTCPSCGAKFYDLNKDPIVCPKCG 33 (108)
T ss_pred CCcccCCCCcchhccCCCCCccCCCCC
Confidence 345667777554444444555666663
No 153
>PRK14873 primosome assembly protein PriA; Provisional
Probab=40.82 E-value=19 Score=39.43 Aligned_cols=49 Identities=20% Similarity=0.449 Sum_probs=33.5
Q ss_pred eeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec
Q 015636 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (403)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (403)
...|..|+- ...|+.|.+.=......-.-.|..|+-.- ....|+.|.+.
T Consensus 383 ~l~C~~Cg~--------~~~C~~C~~~L~~h~~~~~l~Ch~CG~~~--~p~~Cp~Cgs~ 431 (665)
T PRK14873 383 SLACARCRT--------PARCRHCTGPLGLPSAGGTPRCRWCGRAA--PDWRCPRCGSD 431 (665)
T ss_pred eeEhhhCcC--------eeECCCCCCceeEecCCCeeECCCCcCCC--cCccCCCCcCC
Confidence 468888853 46799998765543222345799998753 47789999765
No 154
>PF07295 DUF1451: Protein of unknown function (DUF1451); InterPro: IPR009912 This family consists of several hypothetical bacterial proteins of around 160 residues in length. Members of this family contain four highly conserved cysteine resides toward the C-terminal region of the protein. The function of this family is unknown.
Probab=40.78 E-value=28 Score=30.53 Aligned_cols=31 Identities=23% Similarity=0.426 Sum_probs=16.9
Q ss_pred cccCCCccceeEEEeCCccccCCcCCCCcEE
Q 015636 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (403)
Q Consensus 246 ~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (403)
...|..|+-.=....+..-.+|+.|++..+.
T Consensus 112 ~l~C~~Cg~~~~~~~~~~l~~Cp~C~~~~F~ 142 (146)
T PF07295_consen 112 TLVCENCGHEVELTHPERLPPCPKCGHTEFT 142 (146)
T ss_pred eEecccCCCEEEecCCCcCCCCCCCCCCeee
Confidence 4556666444333322234577777777654
No 155
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=39.09 E-value=14 Score=40.96 Aligned_cols=35 Identities=26% Similarity=0.565 Sum_probs=22.9
Q ss_pred eccccce-eecccCCCccccC------CCccccCCCccceeE
Q 015636 223 HVSFDAF-VPCDSCHGRGFPA------DAKTKICSTCRGIGR 257 (403)
Q Consensus 223 ~v~~~~~-~~C~~C~G~G~~~------~~~~~~C~~C~G~G~ 257 (403)
.++|+.+ -.|+.|+|.|... .....+|+.|+|.-.
T Consensus 723 rFSFNvkGGRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRY 764 (935)
T COG0178 723 RFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRY 764 (935)
T ss_pred cccccCCCcCCccccCCceEEEEeccCCCceeeCCCcCCccc
Confidence 3455544 5788888888643 122578888888653
No 156
>TIGR00595 priA primosomal protein N'. All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=37.56 E-value=23 Score=37.46 Aligned_cols=51 Identities=20% Similarity=0.316 Sum_probs=29.0
Q ss_pred ceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec
Q 015636 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (403)
....|..|+- ...|+.|.+.=......-.-.|..|+-.- .+...|+.|.+.
T Consensus 212 ~~~~C~~Cg~--------~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~-~~~~~Cp~C~s~ 262 (505)
T TIGR00595 212 KNLLCRSCGY--------ILCCPNCDVSLTYHKKEGKLRCHYCGYQE-PIPKTCPQCGSE 262 (505)
T ss_pred CeeEhhhCcC--------ccCCCCCCCceEEecCCCeEEcCCCcCcC-CCCCCCCCCCCC
Confidence 3467888854 35788887654433222244677776332 234577777654
No 157
>PRK00564 hypA hydrogenase nickel incorporation protein; Provisional
Probab=37.01 E-value=40 Score=28.25 Aligned_cols=31 Identities=16% Similarity=0.378 Sum_probs=15.9
Q ss_pred ccceeecccCCCccccCCCccccCCCcccee
Q 015636 226 FDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (403)
Q Consensus 226 ~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (403)
......|..|+-.-.........||.|++..
T Consensus 68 vp~~~~C~~Cg~~~~~~~~~~~~CP~Cgs~~ 98 (117)
T PRK00564 68 EKVELECKDCSHVFKPNALDYGVCEKCHSKN 98 (117)
T ss_pred cCCEEEhhhCCCccccCCccCCcCcCCCCCc
Confidence 3556778888743322222222466666554
No 158
>PRK12380 hydrogenase nickel incorporation protein HybF; Provisional
Probab=36.06 E-value=29 Score=28.89 Aligned_cols=37 Identities=24% Similarity=0.409 Sum_probs=17.3
Q ss_pred Ccceecc-ccceeecccCCCccccCCCccccCCCcccee
Q 015636 219 GCTKHVS-FDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (403)
Q Consensus 219 G~~~~v~-~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (403)
|....+. +.....|+.|+....... ....||.|++.+
T Consensus 59 gA~L~I~~vp~~~~C~~Cg~~~~~~~-~~~~CP~Cgs~~ 96 (113)
T PRK12380 59 GCDLHIVYKPAQAWCWDCSQVVEIHQ-HDAQCPHCHGER 96 (113)
T ss_pred CCEEEEEeeCcEEEcccCCCEEecCC-cCccCcCCCCCC
Confidence 3343332 345667877774433221 122355555443
No 159
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=34.90 E-value=16 Score=34.59 Aligned_cols=12 Identities=42% Similarity=0.985 Sum_probs=7.9
Q ss_pred eeecccCCCccc
Q 015636 229 FVPCDSCHGRGF 240 (403)
Q Consensus 229 ~~~C~~C~G~G~ 240 (403)
.+.||.|+|+|.
T Consensus 38 ~vtCPTCqGtGr 49 (238)
T PF07092_consen 38 SVTCPTCQGTGR 49 (238)
T ss_pred CCcCCCCcCCcc
Confidence 356777777774
No 160
>PRK12336 translation initiation factor IF-2 subunit beta; Provisional
Probab=33.80 E-value=83 Score=29.01 Aligned_cols=13 Identities=31% Similarity=0.710 Sum_probs=8.2
Q ss_pred cceeecccCCCcc
Q 015636 227 DAFVPCDSCHGRG 239 (403)
Q Consensus 227 ~~~~~C~~C~G~G 239 (403)
...+.|+.|+-.-
T Consensus 96 ~~yV~C~~C~~pd 108 (201)
T PRK12336 96 DEYVICSECGLPD 108 (201)
T ss_pred HheEECCCCCCCC
Confidence 4467777776543
No 161
>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300. Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=32.21 E-value=28 Score=29.71 Aligned_cols=30 Identities=3% Similarity=0.082 Sum_probs=18.2
Q ss_pred ccceeecccCCCccccCCCccccCCCccce
Q 015636 226 FDAFVPCDSCHGRGFPADAKTKICSTCRGI 255 (403)
Q Consensus 226 ~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~ 255 (403)
+..+..|+.|.-.=+--+..+.+||.|+-.
T Consensus 6 lGtKr~Cp~cg~kFYDLnk~p~vcP~cg~~ 35 (129)
T TIGR02300 6 LGTKRICPNTGSKFYDLNRRPAVSPYTGEQ 35 (129)
T ss_pred hCccccCCCcCccccccCCCCccCCCcCCc
Confidence 344567887765555445556677777543
No 162
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=31.73 E-value=27 Score=39.88 Aligned_cols=30 Identities=30% Similarity=0.566 Sum_probs=24.1
Q ss_pred ccCCcCCCCcEEee---------eeeeEEeeceEEeceE
Q 015636 265 STCSTCKGLGRIIK---------DHCMTCKGSGVVDGVK 294 (403)
Q Consensus 265 ~~C~~C~G~G~~~~---------~~C~~C~g~G~~~~~~ 294 (403)
-.|+.|.|.|.+.. ..|..|+|.....+.-
T Consensus 739 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l 777 (943)
T PRK00349 739 GRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETL 777 (943)
T ss_pred CCCCcccccceEEEEeccCCCccccCccccCccccccce
Confidence 35999999999862 5899999998766543
No 163
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=31.03 E-value=23 Score=42.98 Aligned_cols=35 Identities=26% Similarity=0.537 Sum_probs=24.8
Q ss_pred ecccc-ceeecccCCCccccCC------CccccCCCccceeE
Q 015636 223 HVSFD-AFVPCDSCHGRGFPAD------AKTKICSTCRGIGR 257 (403)
Q Consensus 223 ~v~~~-~~~~C~~C~G~G~~~~------~~~~~C~~C~G~G~ 257 (403)
.++|+ ..-.|+.|.|.|.... ....+|+.|+|...
T Consensus 1600 ~FSfN~~~GrC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~ 1641 (1809)
T PRK00635 1600 MFSTNTKQGQCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRI 1641 (1809)
T ss_pred cccccCCCCCCCCCccCceEEEecccCCCcccCCCCCCCcCC
Confidence 34455 3567999999997531 22578999999875
No 164
>PF03589 Antiterm: Antitermination protein; InterPro: IPR003222 This entry consists of antitermination proteins found in bacteriophages, such as protein Q from phage lambda, and some bacterial homologues. Protein Q positively regulates expression of the phage late gene operon by binding to the bacterial host RNA polymerase (RNAP) and modifying it. The modified RNAP transcribes through termination sites that otherwise prevent expression of the regulated genes [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent
Probab=30.28 E-value=18 Score=29.20 Aligned_cols=13 Identities=31% Similarity=0.698 Sum_probs=8.1
Q ss_pred cccCCcCCCCcEE
Q 015636 264 TSTCSTCKGLGRI 276 (403)
Q Consensus 264 ~~~C~~C~G~G~~ 276 (403)
-..|..|+|.|+.
T Consensus 32 fk~c~rcgg~G~s 44 (95)
T PF03589_consen 32 FKDCERCGGRGYS 44 (95)
T ss_pred hhhhhhhcCCCCC
Confidence 3466667666654
No 165
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=30.13 E-value=57 Score=20.04 Aligned_cols=16 Identities=19% Similarity=0.482 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHhC
Q 015636 96 QDEIKKAFHMLAKQYH 111 (403)
Q Consensus 96 ~~eIk~ayr~la~~~H 111 (403)
.++.|.+-|+.|+.||
T Consensus 10 ~~~~r~~lR~AALeYH 25 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYH 25 (28)
T ss_pred hHHHHHHHHHHHHHhc
Confidence 3678999999999999
No 166
>PRK05580 primosome assembly protein PriA; Validated
Probab=29.39 E-value=31 Score=37.91 Aligned_cols=50 Identities=20% Similarity=0.438 Sum_probs=26.4
Q ss_pred eeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeec
Q 015636 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (403)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (403)
...|..|+- ...|+.|.+.=......-.-.|..|+.. ......|+.|.+.
T Consensus 381 ~~~C~~Cg~--------~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~-~~~~~~Cp~Cg~~ 430 (679)
T PRK05580 381 FLLCRDCGW--------VAECPHCDASLTLHRFQRRLRCHHCGYQ-EPIPKACPECGST 430 (679)
T ss_pred ceEhhhCcC--------ccCCCCCCCceeEECCCCeEECCCCcCC-CCCCCCCCCCcCC
Confidence 467777754 2467777763322211123456677644 2234567777554
No 167
>TIGR00100 hypA hydrogenase nickel insertion protein HypA. In Hpylori, hypA mutant abolished hydrogenase activity and decrease in urease activity. Nickel supplementation in media restored urease activity and partial hydrogenase activity. HypA probably involved in inserting Ni in enzymes.
Probab=29.02 E-value=44 Score=27.87 Aligned_cols=29 Identities=24% Similarity=0.543 Sum_probs=13.4
Q ss_pred cceeecccCCCccccCCCccccCCCcccee
Q 015636 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (403)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (403)
.....|+.|+-.-... .....||.|++..
T Consensus 68 p~~~~C~~Cg~~~~~~-~~~~~CP~Cgs~~ 96 (115)
T TIGR00100 68 PVECECEDCSEEVSPE-IDLYRCPKCHGIM 96 (115)
T ss_pred CcEEEcccCCCEEecC-CcCccCcCCcCCC
Confidence 4456777776332211 1123455555443
No 168
>PRK11032 hypothetical protein; Provisional
Probab=28.98 E-value=54 Score=29.18 Aligned_cols=32 Identities=16% Similarity=0.292 Sum_probs=16.3
Q ss_pred cccCCCccceeEEEeCCccccCCcCCCCcEEe
Q 015636 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (403)
Q Consensus 246 ~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (403)
...|..|+=.=.+..+..-.+|+.|++..+..
T Consensus 124 ~LvC~~Cg~~~~~~~p~~i~pCp~C~~~~F~R 155 (160)
T PRK11032 124 NLVCEKCHHHLAFYTPEVLPLCPKCGHDQFQR 155 (160)
T ss_pred eEEecCCCCEEEecCCCcCCCCCCCCCCeeee
Confidence 34555554333332223345677777766543
No 169
>PF04216 FdhE: Protein involved in formate dehydrogenase formation; InterPro: IPR006452 This family of sequences describe an accessory protein required for the assembly of formate dehydrogenase of certain proteobacteria although not present in the final complex []. The exact nature of the function of FdhE in the assembly of the complex is unknown, but considering the presence of selenocysteine, molybdopterin, iron-sulphur clusters and cytochrome b556, it is likely to be involved in the insertion of cofactors. ; GO: 0005737 cytoplasm; PDB: 2FIY_B.
Probab=28.51 E-value=24 Score=34.34 Aligned_cols=42 Identities=19% Similarity=0.348 Sum_probs=14.9
Q ss_pred eeecccCCCc---cc----c-CCCccccCCCccceeEEEeCCccccCCcCCCCc
Q 015636 229 FVPCDSCHGR---GF----P-ADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (403)
Q Consensus 229 ~~~C~~C~G~---G~----~-~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (403)
...||.|.+. +. . .+.+...|+.|+-.=.. .+..|+.|+-..
T Consensus 172 ~g~CPvCGs~P~~s~l~~~~~~G~R~L~Cs~C~t~W~~----~R~~Cp~Cg~~~ 221 (290)
T PF04216_consen 172 RGYCPVCGSPPVLSVLRGGEREGKRYLHCSLCGTEWRF----VRIKCPYCGNTD 221 (290)
T ss_dssp -SS-TTT---EEEEEEE------EEEEEETTT--EEE------TTS-TTT---S
T ss_pred CCcCCCCCCcCceEEEecCCCCccEEEEcCCCCCeeee----cCCCCcCCCCCC
Confidence 3578888763 11 0 13345567777443322 355677776543
No 170
>PF13719 zinc_ribbon_5: zinc-ribbon domain
Probab=28.27 E-value=28 Score=22.82 Aligned_cols=10 Identities=30% Similarity=0.866 Sum_probs=5.1
Q ss_pred eecccCCCcc
Q 015636 230 VPCDSCHGRG 239 (403)
Q Consensus 230 ~~C~~C~G~G 239 (403)
+.||.|+..-
T Consensus 3 i~CP~C~~~f 12 (37)
T PF13719_consen 3 ITCPNCQTRF 12 (37)
T ss_pred EECCCCCceE
Confidence 4555555443
No 171
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=27.65 E-value=86 Score=29.50 Aligned_cols=40 Identities=20% Similarity=0.137 Sum_probs=28.1
Q ss_pred EEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCCCeeeeee
Q 015636 348 YVDSNISFTQAILGGKVDVPTLSGKVQVKVIVLSLLLLLF 387 (403)
Q Consensus 348 ~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~~~~~~~~ 387 (403)
-..+.++-.+..-||+..|+..+|...|+.|++.++++--
T Consensus 116 S~~lyLnd~~~yeGGEl~~~~~~g~~~Vkp~aG~~vlfps 155 (226)
T PRK05467 116 SATLFLSDPDDYDGGELVIEDTYGEHRVKLPAGDLVLYPS 155 (226)
T ss_pred EEEEEeCCCCCCcCCceEEecCCCcEEEecCCCeEEEECC
Confidence 3333344334456777778877888899999999988764
No 172
>PF01155 HypA: Hydrogenase expression/synthesis hypA family; InterPro: IPR000688 Bacterial membrane-bound nickel-dependent hydrogenases requires a number of accessory proteins which are involved in their maturation. The exact role of these proteins is not yet clear, but some seem to be required for the incorporation of the nickel ions []. One of these proteins is generally known as hypA. It is a protein of about 12 to 14 kDa that contains, in its C-terminal region, four conserved cysteines that form a zinc-finger like motif. Escherichia coli has two proteins that belong to this family, hypA and hybF. A homologue, MJ0214, has also been found in a number of archaeal species, including the genome of Methanocaldococcus jannaschii (Methanococcus jannaschii).; GO: 0016151 nickel ion binding, 0006464 protein modification process; PDB: 2KDX_A 3A44_D 3A43_B.
Probab=27.44 E-value=28 Score=28.97 Aligned_cols=29 Identities=21% Similarity=0.376 Sum_probs=12.3
Q ss_pred cceeecccCCCccccCCCccccCCCcccee
Q 015636 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (403)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (403)
+....|..|+-........ ..||.|++..
T Consensus 68 p~~~~C~~Cg~~~~~~~~~-~~CP~Cgs~~ 96 (113)
T PF01155_consen 68 PARARCRDCGHEFEPDEFD-FSCPRCGSPD 96 (113)
T ss_dssp --EEEETTTS-EEECHHCC-HH-SSSSSS-
T ss_pred CCcEECCCCCCEEecCCCC-CCCcCCcCCC
Confidence 4456777776654332211 3455555544
No 173
>TIGR01562 FdhE formate dehydrogenase accessory protein FdhE. The only sequence scoring between trusted and noise is that from Aquifex aeolicus, which shows certain structural differences from the proteobacterial forms in the alignment. However it is notable that A. aeolicus also has a sequence scoring above trusted to the alpha subunit of formate dehydrogenase (TIGR01553).
Probab=26.94 E-value=50 Score=32.58 Aligned_cols=41 Identities=20% Similarity=0.361 Sum_probs=22.3
Q ss_pred eeecccCCCcc---------ccCCCccccCCCccceeEEEeCCccccCCcCCCC
Q 015636 229 FVPCDSCHGRG---------FPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGL 273 (403)
Q Consensus 229 ~~~C~~C~G~G---------~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~ 273 (403)
...||.|++.= ...+.+.-.|..|...=.. .+..|+.|+-.
T Consensus 184 ~~~CPvCGs~P~~s~~~~~~~~~G~RyL~CslC~teW~~----~R~~C~~Cg~~ 233 (305)
T TIGR01562 184 RTLCPACGSPPVASMVRQGGKETGLRYLSCSLCATEWHY----VRVKCSHCEES 233 (305)
T ss_pred CCcCCCCCChhhhhhhcccCCCCCceEEEcCCCCCcccc----cCccCCCCCCC
Confidence 34788887641 1233345567766554433 35566666543
No 174
>PRK00488 pheS phenylalanyl-tRNA synthetase subunit alpha; Validated
Probab=25.55 E-value=17 Score=36.31 Aligned_cols=21 Identities=43% Similarity=1.121 Sum_probs=12.6
Q ss_pred eeecccCCCccccCCCccccCCCccceeEE
Q 015636 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRV 258 (403)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~ 258 (403)
.+.|..|+|.| |+.|++.|++
T Consensus 260 dv~~~~~~g~g---------c~~ck~~~Wi 280 (339)
T PRK00488 260 DVSCFKCGGKG---------CRVCKGTGWL 280 (339)
T ss_pred EEEEeccCCCc---------ccccCCCCce
Confidence 45676677655 5556666654
No 175
>PRK03681 hypA hydrogenase nickel incorporation protein; Validated
Probab=25.49 E-value=59 Score=27.10 Aligned_cols=11 Identities=27% Similarity=0.715 Sum_probs=6.9
Q ss_pred cceeecccCCC
Q 015636 227 DAFVPCDSCHG 237 (403)
Q Consensus 227 ~~~~~C~~C~G 237 (403)
.....|..|+-
T Consensus 68 p~~~~C~~Cg~ 78 (114)
T PRK03681 68 EAECWCETCQQ 78 (114)
T ss_pred CcEEEcccCCC
Confidence 45567777763
No 176
>PF08274 PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR013987 The PhnA protein family includes the uncharacterised Escherichia coli protein PhnA and its homologues. The E. coli phnA gene is part of a large operon associated with alkylphosphonate uptake and carbon-phosphorus bond cleavage []. The protein is not related to the characterised phosphonoacetate hydrolase designated PhnA []. This entry represents the N-terminal domain of PhnA, which is predicted to form a zinc-ribbon.; PDB: 2AKL_A.
Probab=25.07 E-value=31 Score=21.74 Aligned_cols=22 Identities=23% Similarity=0.593 Sum_probs=6.1
Q ss_pred ecccCCCccccCCCccccCCCc
Q 015636 231 PCDSCHGRGFPADAKTKICSTC 252 (403)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C 252 (403)
.|+.|+..-.-.......|+.|
T Consensus 4 ~Cp~C~se~~y~D~~~~vCp~C 25 (30)
T PF08274_consen 4 KCPLCGSEYTYEDGELLVCPEC 25 (30)
T ss_dssp --TTT-----EE-SSSEEETTT
T ss_pred CCCCCCCcceeccCCEEeCCcc
Confidence 4555554433333333444444
No 177
>COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]
Probab=24.69 E-value=2.4e+02 Score=24.35 Aligned_cols=12 Identities=17% Similarity=0.393 Sum_probs=8.0
Q ss_pred ccccCCcCCCCc
Q 015636 263 FTSTCSTCKGLG 274 (403)
Q Consensus 263 ~~~~C~~C~G~G 274 (403)
.+..|+.|+..+
T Consensus 42 Pr~~Cp~C~~~~ 53 (140)
T COG1545 42 PRAYCPKCGSET 53 (140)
T ss_pred CcccCCCCCCCC
Confidence 356677777765
No 178
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=23.16 E-value=1.3e+02 Score=22.29 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=31.3
Q ss_pred HHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 015636 101 KAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (403)
Q Consensus 101 ~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~ 147 (403)
+..|...+.-||+... .+..+.|.+.|..|++..+...+|..
T Consensus 14 ~~~r~~~~~~~p~~~~-----~eisk~l~~~Wk~ls~~eK~~y~~~a 55 (72)
T cd01388 14 KRHRRKVLQEYPLKEN-----RAISKILGDRWKALSNEEKQPYYEEA 55 (72)
T ss_pred HHHHHHHHHHCCCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4556666778998642 46778899999999998887765553
No 179
>COG5349 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.89 E-value=27 Score=29.53 Aligned_cols=10 Identities=50% Similarity=1.258 Sum_probs=5.3
Q ss_pred cCCCccceeEE
Q 015636 248 ICSTCRGIGRV 258 (403)
Q Consensus 248 ~C~~C~G~G~~ 258 (403)
.||.| |.|+.
T Consensus 23 rCP~C-GeGrL 32 (126)
T COG5349 23 RCPRC-GEGRL 32 (126)
T ss_pred CCCCC-CCchh
Confidence 45555 45554
No 180
>PF09862 DUF2089: Protein of unknown function (DUF2089); InterPro: IPR018658 This family consists of various hypothetical prokaryotic proteins.
Probab=22.06 E-value=52 Score=27.52 Aligned_cols=20 Identities=25% Similarity=0.690 Sum_probs=13.9
Q ss_pred CCcCCCCcEEeeeeeeEEee
Q 015636 267 CSTCKGLGRIIKDHCMTCKG 286 (403)
Q Consensus 267 C~~C~G~G~~~~~~C~~C~g 286 (403)
|+.|++.=.+.+-.|..|+.
T Consensus 1 CPvCg~~l~vt~l~C~~C~t 20 (113)
T PF09862_consen 1 CPVCGGELVVTRLKCPSCGT 20 (113)
T ss_pred CCCCCCceEEEEEEcCCCCC
Confidence 66666666667777777764
No 181
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=21.24 E-value=95 Score=27.30 Aligned_cols=22 Identities=9% Similarity=0.163 Sum_probs=15.8
Q ss_pred eEEEEEEeCCCCCCCCEEEEcC
Q 015636 293 VKEVKVTIPAGVDSGDTIRVPE 314 (403)
Q Consensus 293 ~~~l~V~Ip~G~~~G~~i~l~g 314 (403)
...++|.-+.+.+.||.+.+.-
T Consensus 48 ~~~~~v~~~~~~~vGD~V~v~i 69 (154)
T PRK10862 48 THQLVVPSSQPLVPGQKVELGI 69 (154)
T ss_pred ceEEEecCCCCCCCCCEEEEec
Confidence 3456777777788888887743
No 182
>PF09297 zf-NADH-PPase: NADH pyrophosphatase zinc ribbon domain; InterPro: IPR015376 This domain has a zinc ribbon structure and is often found between two NUDIX domains.; GO: 0016787 hydrolase activity, 0046872 metal ion binding; PDB: 1VK6_A 2GB5_A.
Probab=20.81 E-value=75 Score=19.91 Aligned_cols=6 Identities=33% Similarity=1.359 Sum_probs=2.6
Q ss_pred ccCCcC
Q 015636 265 STCSTC 270 (403)
Q Consensus 265 ~~C~~C 270 (403)
..|+.|
T Consensus 22 r~C~~C 27 (32)
T PF09297_consen 22 RRCPSC 27 (32)
T ss_dssp EEESSS
T ss_pred eECCCC
Confidence 344444
No 183
>PF14599 zinc_ribbon_6: Zinc-ribbon; PDB: 2K2D_A.
Probab=20.61 E-value=75 Score=23.52 Aligned_cols=10 Identities=20% Similarity=1.042 Sum_probs=4.1
Q ss_pred eecccCCCcc
Q 015636 230 VPCDSCHGRG 239 (403)
Q Consensus 230 ~~C~~C~G~G 239 (403)
+.|..|+.++
T Consensus 31 IlCNDC~~~s 40 (61)
T PF14599_consen 31 ILCNDCNAKS 40 (61)
T ss_dssp EEESSS--EE
T ss_pred EECCCCCCcc
Confidence 4565555443
No 184
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=20.23 E-value=1.3e+02 Score=25.12 Aligned_cols=41 Identities=15% Similarity=0.258 Sum_probs=26.1
Q ss_pred EEEeCCCCCCCCEEEEcCCccCCCC------CCCcccEEEEEEEEcC
Q 015636 297 KVTIPAGVDSGDTIRVPEAGNAGGR------GRQHGNLFIKLKVADD 337 (403)
Q Consensus 297 ~V~Ip~G~~~G~~i~l~g~G~~~~~------g~~~GDL~v~i~v~~h 337 (403)
+..||.|+.+|+.|.+.|.=..... ....+|+.+++++...
T Consensus 2 ~~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~ 48 (128)
T smart00276 2 TLPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFN 48 (128)
T ss_pred cccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCC
Confidence 4578999999999999986443211 0112466666665543
No 185
>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional
Probab=20.11 E-value=83 Score=21.45 Aligned_cols=7 Identities=29% Similarity=0.914 Sum_probs=3.4
Q ss_pred ccCCcCC
Q 015636 265 STCSTCK 271 (403)
Q Consensus 265 ~~C~~C~ 271 (403)
..|+.|+
T Consensus 22 ~~Cp~CG 28 (46)
T PRK00398 22 VRCPYCG 28 (46)
T ss_pred eECCCCC
Confidence 3455554
Done!