Query 015636
Match_columns 403
No_of_seqs 394 out of 2754
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 16:03:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015636.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015636hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 4.3E-51 1.5E-55 400.9 14.3 236 79-380 25-267 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 1.5E-43 5.1E-48 335.2 13.1 190 199-390 8-214 (248)
3 3agx_A DNAJ homolog subfamily 100.0 6.2E-30 2.1E-34 230.8 13.1 138 202-391 2-144 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 7E-29 2.4E-33 223.8 13.8 138 201-391 2-144 (180)
5 1c3g_A Heat shock protein 40; 99.9 3.1E-27 1.1E-31 211.1 12.8 133 203-391 1-138 (170)
6 2dn9_A DNAJ homolog subfamily 99.9 7.8E-22 2.7E-26 153.9 8.5 73 79-151 4-76 (79)
7 1bq0_A DNAJ, HSP40; chaperone, 99.9 1.8E-22 6.2E-27 165.5 5.0 73 81-153 2-74 (103)
8 1hdj_A Human HSP40, HDJ-1; mol 99.8 3.1E-21 1.1E-25 149.8 7.7 71 81-152 2-72 (77)
9 2yua_A Williams-beuren syndrom 99.8 2.8E-21 9.6E-26 157.3 7.2 72 77-148 12-83 (99)
10 2ctr_A DNAJ homolog subfamily 99.8 5E-21 1.7E-25 152.5 8.0 72 79-151 4-75 (88)
11 2ej7_A HCG3 gene; HCG3 protein 99.8 5.1E-21 1.7E-25 150.3 7.7 73 79-151 6-79 (82)
12 2ctp_A DNAJ homolog subfamily 99.8 6.2E-21 2.1E-25 148.4 7.3 72 79-151 4-75 (78)
13 2dmx_A DNAJ homolog subfamily 99.8 1.2E-20 3.9E-25 151.6 8.9 74 79-152 6-80 (92)
14 2ctq_A DNAJ homolog subfamily 99.8 7.2E-21 2.4E-25 158.4 7.3 73 79-151 17-89 (112)
15 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.6E-20 5.3E-25 149.6 8.1 70 80-150 15-84 (88)
16 2ctw_A DNAJ homolog subfamily 99.8 1.3E-20 4.5E-25 156.0 7.0 73 79-151 14-86 (109)
17 2och_A Hypothetical protein DN 99.8 2E-20 6.9E-25 143.7 7.2 68 79-149 5-72 (73)
18 2lgw_A DNAJ homolog subfamily 99.8 2.6E-20 9E-25 151.4 7.1 72 82-153 2-74 (99)
19 2o37_A Protein SIS1; HSP40, J- 99.8 2.5E-20 8.7E-25 149.6 6.3 71 79-152 5-75 (92)
20 1wjz_A 1700030A21RIK protein; 99.8 3.3E-20 1.1E-24 149.4 6.1 71 79-149 13-89 (94)
21 2ctt_A DNAJ homolog subfamily 99.8 3.8E-20 1.3E-24 152.0 0.5 99 202-300 1-103 (104)
22 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 3.1E-19 1.1E-23 147.7 5.6 70 80-149 13-86 (109)
23 3apq_A DNAJ homolog subfamily 99.7 1.2E-18 4.1E-23 159.8 7.3 72 82-153 2-73 (210)
24 2ys8_A RAB-related GTP-binding 99.7 2.7E-18 9.2E-23 137.2 6.5 62 81-143 26-87 (90)
25 2l6l_A DNAJ homolog subfamily 99.7 2.2E-18 7.6E-23 151.4 6.4 70 79-148 7-82 (155)
26 3bvo_A CO-chaperone protein HS 99.7 5.1E-18 1.8E-22 155.6 8.0 100 42-147 9-115 (207)
27 1iur_A KIAA0730 protein; DNAJ 99.7 2.7E-18 9.3E-23 136.3 3.8 68 76-143 10-78 (88)
28 1faf_A Large T antigen; J doma 99.7 1.2E-17 4.2E-22 130.0 5.4 62 82-148 11-74 (79)
29 3hho_A CO-chaperone protein HS 99.7 1.9E-17 6.5E-22 148.1 6.4 68 81-148 3-77 (174)
30 1gh6_A Large T antigen; tumor 99.7 2.7E-18 9.3E-23 142.8 0.8 64 82-149 8-73 (114)
31 2pf4_E Small T antigen; PP2A, 99.7 5.1E-18 1.7E-22 150.7 1.2 64 82-149 11-76 (174)
32 1fpo_A HSC20, chaperone protei 99.7 5E-17 1.7E-21 144.9 5.5 66 83-148 2-74 (171)
33 1n4c_A Auxilin; four helix bun 99.7 5.6E-17 1.9E-21 144.8 5.6 66 79-144 114-182 (182)
34 2qwo_B Putative tyrosine-prote 99.6 1.1E-16 3.8E-21 127.5 4.2 56 82-137 33-91 (92)
35 2guz_A Mitochondrial import in 99.6 2E-16 7E-21 120.6 4.5 59 79-141 11-70 (71)
36 1nlt_A Protein YDJ1, mitochond 99.6 3E-15 1E-19 141.2 10.9 138 206-347 30-246 (248)
37 3uo3_A J-type CO-chaperone JAC 99.6 3.9E-16 1.3E-20 140.2 4.4 66 80-148 9-81 (181)
38 3ag7_A Putative uncharacterize 99.6 4.2E-16 1.4E-20 127.9 3.3 60 79-139 38-104 (106)
39 3apo_A DNAJ homolog subfamily 99.6 3.6E-16 1.2E-20 169.7 1.3 75 79-153 18-92 (780)
40 1exk_A DNAJ protein; extended 99.3 1.2E-12 4.1E-17 101.6 3.2 74 219-292 1-78 (79)
41 3i38_A Putative chaperone DNAJ 99.2 2.7E-11 9.4E-16 99.7 5.5 46 335-380 2-47 (109)
42 3i38_A Putative chaperone DNAJ 99.0 7.7E-11 2.6E-15 97.0 2.2 78 200-344 9-86 (109)
43 1xao_A YDJ1, mitochondrial pro 99.0 2E-10 6.8E-15 96.4 3.0 82 200-345 4-89 (121)
44 2y4t_A DNAJ homolog subfamily 98.9 5.9E-10 2E-14 110.3 5.0 65 82-146 382-449 (450)
45 1xao_A YDJ1, mitochondrial pro 98.9 1.6E-09 5.4E-14 90.9 5.0 42 339-380 1-43 (121)
46 2guz_B Mitochondrial import in 98.8 6.7E-09 2.3E-13 77.1 4.6 52 83-138 5-59 (65)
47 3agx_A DNAJ homolog subfamily 98.7 8.3E-09 2.8E-13 92.5 6.0 48 295-342 121-169 (181)
48 2q2g_A HSP40 protein, heat sho 98.7 8E-09 2.7E-13 92.5 3.3 79 200-342 90-169 (180)
49 1c3g_A Heat shock protein 40; 98.6 1.1E-08 3.9E-13 90.7 1.0 78 200-341 84-162 (170)
50 3lz8_A Putative chaperone DNAJ 98.4 2.3E-07 7.7E-12 90.7 5.6 78 200-344 229-306 (329)
51 1exk_A DNAJ protein; extended 97.9 4.4E-06 1.5E-10 64.1 3.0 48 227-278 26-78 (79)
52 2ctt_A DNAJ homolog subfamily 97.9 4.2E-06 1.4E-10 67.9 2.3 53 228-284 44-101 (104)
53 3pmq_A Decaheme cytochrome C M 97.4 1.2E-05 4.2E-10 84.7 -2.0 51 206-256 168-221 (669)
54 3lcz_A YCZA, inhibitor of trap 97.2 0.00018 6.1E-09 50.8 2.5 25 248-276 11-35 (53)
55 3lcz_A YCZA, inhibitor of trap 97.1 8.5E-05 2.9E-09 52.5 0.0 30 263-292 8-37 (53)
56 2bx9_A Anti-trap, AT, tryptoph 96.9 0.00043 1.5E-08 48.8 2.5 26 230-258 10-35 (53)
57 2bx9_A Anti-trap, AT, tryptoph 95.9 0.0015 5.3E-08 46.0 0.3 29 246-278 9-37 (53)
58 2pzi_A Probable serine/threoni 87.9 0.31 1.1E-05 51.4 3.8 48 79-134 626-675 (681)
59 1ltl_A DNA replication initiat 49.9 32 0.0011 31.9 6.8 12 265-276 157-168 (279)
60 2qkd_A Zinc finger protein ZPR 45.0 9.1 0.00031 37.8 2.2 20 295-314 93-112 (404)
61 2qkd_A Zinc finger protein ZPR 42.1 4.4 0.00015 40.0 -0.6 19 296-314 302-320 (404)
62 3nyb_B Protein AIR2; polya RNA 31.7 34 0.0012 25.7 3.1 50 228-277 4-59 (83)
63 2b7e_A PRE-mRNA processing pro 28.1 57 0.002 23.0 3.5 48 97-147 3-55 (59)
64 2cqn_A Formin-binding protein 27.3 80 0.0027 23.3 4.4 53 95-148 7-62 (77)
65 2fiy_A Protein FDHE homolog; F 26.9 27 0.00094 33.0 2.2 11 227-237 180-190 (309)
66 3zxf_A Galectin-7; sugar bindi 21.0 1.4E+02 0.0049 24.2 5.3 44 295-338 7-59 (138)
67 4h4n_A Hypothetical protein BA 20.4 65 0.0022 22.4 2.4 21 372-392 8-28 (67)
68 2kdx_A HYPA, hydrogenase/ureas 20.2 69 0.0024 25.5 3.1 29 227-256 71-100 (119)
69 2apo_B Ribosome biogenesis pro 20.1 53 0.0018 23.2 2.0 10 264-273 18-27 (60)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=4.3e-51 Score=400.88 Aligned_cols=236 Identities=28% Similarity=0.504 Sum_probs=113.4
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCccccCC
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS 158 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~~~~~~ 158 (403)
+...|||+||||+++|+.+|||+|||+||++||||++++ +.|+++|++|++||++|+||.+|+.||+++..+... .++
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~-~~~ 102 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDP-GFG 102 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCC-Ccc
Confidence 445799999999999999999999999999999999985 578899999999999999999999999984321100 000
Q ss_pred CCCCCCCcccCCCCcceeccccccccchhhhhhhhhcc-------ccCCCCCCceEEEEEeeeccccCcceeccccceee
Q 015636 159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (403)
Q Consensus 159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-------~~~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~ 231 (403)
.++... +.+|. +.+|.++|+++|++ ....+|.|++++|.|+|+|+|.|+++++.+.+.+.
T Consensus 103 ----~~~~~~--~~~f~-------~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~ 169 (329)
T 3lz8_A 103 ----RQRQTH--EQSYS-------QQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVY 169 (329)
T ss_dssp -----------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEEC
T ss_pred ----cccccc--cCCcC-------CCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEee
Confidence 001000 01110 01244556666643 12457899999999999999999999999877653
Q ss_pred cccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEEeeceEEeceEEEEEEeCCCCCCCCEEE
Q 015636 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311 (403)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~ 311 (403)
| |.| ++ .+...+.++|+||||+++|++|+
T Consensus 170 ~----g~G-----------------~v------------------------------~~~~~~~l~V~IP~Gv~~G~~Ir 198 (329)
T 3lz8_A 170 N----VFG-----------------MI------------------------------ESETPKTLNVKIPAGVVDGQRIR 198 (329)
T ss_dssp C----SCC------------------C------------------------------CEEEEEEEEEEECTTCCTTCEEE
T ss_pred c----CCe-----------------EE------------------------------EEecceEEEEeCCCCCCCCCEEE
Confidence 2 222 11 12235689999999999999999
Q ss_pred EcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 312 l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
|+|+|++..+++.+|||||+|+|+||+.|+|+|+||+++++|+|+|||||++++|+||||++.|+||++
T Consensus 199 l~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~g 267 (329)
T 3lz8_A 199 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPG 267 (329)
T ss_dssp ESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTT
T ss_pred EcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCC
Confidence 999999987778899999999999999999999999999999999999999999999999999999985
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=1.5e-43 Score=335.16 Aligned_cols=190 Identities=27% Similarity=0.509 Sum_probs=172.4
Q ss_pred CCCCCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeC--------CccccCCcC
Q 015636 199 SHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTC 270 (403)
Q Consensus 199 ~~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C 270 (403)
..+|+|++++|.|||||||+|+++++.+.+.+.|+.|+|+|...+. ..+|+.|+|+|++... +++.+|+.|
T Consensus 8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C 86 (248)
T 1nlt_A 8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC 86 (248)
T ss_dssp CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence 3578999999999999999999999999999999999999998877 4899999999976321 247899999
Q ss_pred CCCcEEe--eeeeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEE
Q 015636 271 KGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (403)
Q Consensus 271 ~G~G~~~--~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~ 348 (403)
+|.|+++ +++|..|.|.|++.+.+.++|.||||+++|++|+|+|+|++.+ ++.+|||||+|+++||+.|+|+|+|||
T Consensus 87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCC-CCCcceEEEEEEEecCccceeeCCEEE
Confidence 9999999 9999999999999999999999999999999999999999865 558999999999999999999999999
Q ss_pred EEeecCHhhhhcCCeEEeeCCCCc-EEEEEcCC------Ceeeeeeeee
Q 015636 349 VDSNISFTQAILGGKVDVPTLSGK-VQVKVIVL------SLLLLLFYSL 390 (403)
Q Consensus 349 ~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~~------~~~~~~~~~~ 390 (403)
++++|+|+|||||++++|+||||+ +.|+||++ .++.|-..++
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gm 214 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGM 214 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSC
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCC
Confidence 999999999999999999999996 89999875 4455544444
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=99.96 E-value=6.2e-30 Score=230.83 Aligned_cols=138 Identities=26% Similarity=0.384 Sum_probs=113.6
Q ss_pred CCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeee
Q 015636 202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC 281 (403)
Q Consensus 202 g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C 281 (403)
++|++++|.|||+|||+|+++++.+.+ .|+.|+|.|
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~--~c~~c~G~g------------------------------------------ 37 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH--KRLNPDGKS------------------------------------------ 37 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE--EEECTTSSC------------------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec--ccCCCCCce------------------------------------------
Confidence 468999999999999999999987643 233333322
Q ss_pred eEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcC
Q 015636 282 MTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILG 361 (403)
Q Consensus 282 ~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG 361 (403)
++.+.+.++|.||||+++|++|+|+|+|++.. ++.+|||||+|+++||+.|+|+|+||+++++|+|+||++|
T Consensus 38 -------~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG 109 (181)
T 3agx_A 38 -------IRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG 109 (181)
T ss_dssp -------EEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHC
T ss_pred -------EEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCC
Confidence 23567899999999999999999999999976 5689999999999999999999999999999999999999
Q ss_pred CeEEeeCCCCc-EEEEEcC----CCeeeeeeeeee
Q 015636 362 GKVDVPTLSGK-VQVKVIV----LSLLLLLFYSLI 391 (403)
Q Consensus 362 ~~~~I~tldG~-~~l~ip~----~~~~~~~~~~~~ 391 (403)
++++|+||||+ +.|+||+ +..+.|-..++-
T Consensus 110 ~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp 144 (181)
T 3agx_A 110 CTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLP 144 (181)
T ss_dssp EEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCB
T ss_pred CEEEeECCCCCEEEEECCCccCCCcEEEECCcCCC
Confidence 99999999995 8888884 445555555543
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=7e-29 Score=223.80 Aligned_cols=138 Identities=19% Similarity=0.282 Sum_probs=119.8
Q ss_pred CCCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeee
Q 015636 201 FAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (403)
Q Consensus 201 ~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (403)
++.|++++|.|||+|||+|+++++.+.+.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 4789999999999999999999999998888741
Q ss_pred eeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhc
Q 015636 281 CMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAIL 360 (403)
Q Consensus 281 C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAll 360 (403)
|++.+.+.++|.||||+++|++|+|+|+|+++.+++.+|||||+|+++||+.|+|+|+||+++++|+|+||++
T Consensus 36 -------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAll 108 (180)
T 2q2g_A 36 -------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALT 108 (180)
T ss_dssp -------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHH
T ss_pred -------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHHHhC
Confidence 2345678999999999999999999999999656788999999999999999999999999999999999999
Q ss_pred CCeEEeeCCCCc-EEEEEcC----CCeeeeeeeeee
Q 015636 361 GGKVDVPTLSGK-VQVKVIV----LSLLLLLFYSLI 391 (403)
Q Consensus 361 G~~~~I~tldG~-~~l~ip~----~~~~~~~~~~~~ 391 (403)
|++++|+||||+ +.|+||. +..+.|--.++-
T Consensus 109 G~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp 144 (180)
T 2q2g_A 109 GFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMP 144 (180)
T ss_dssp CEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCB
T ss_pred CCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCC
Confidence 999999999995 8888875 344555544443
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=99.94 E-value=3.1e-27 Score=211.08 Aligned_cols=133 Identities=18% Similarity=0.278 Sum_probs=114.9
Q ss_pred CCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeee
Q 015636 203 PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM 282 (403)
Q Consensus 203 ~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~ 282 (403)
+|++++|.|||+|||+|+++++.+.+.. +
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~------~--------------------------------------------- 29 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG------P--------------------------------------------- 29 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE------T---------------------------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec------C---------------------------------------------
Confidence 4789999999999999999999986541 0
Q ss_pred EEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeCCeEEEEeecCHhhhhcCC
Q 015636 283 TCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGG 362 (403)
Q Consensus 283 ~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~ 362 (403)
.|.+ +.+.++|.||||+++|++|+|+|+|++..+++.+|||||+|+++||+.|+|+|+||+++++|+|+||++|+
T Consensus 30 ----~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~ 104 (170)
T 1c3g_A 30 ----HGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGF 104 (170)
T ss_dssp ----TTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHHHCE
T ss_pred ----CCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHhCCC
Confidence 0123 46789999999999999999999999777788999999999999999999999999999999999999999
Q ss_pred eEEeeCCCCc-EEEEEcC----CCeeeeeeeeee
Q 015636 363 KVDVPTLSGK-VQVKVIV----LSLLLLLFYSLI 391 (403)
Q Consensus 363 ~~~I~tldG~-~~l~ip~----~~~~~~~~~~~~ 391 (403)
+++|+||||+ +.|+||+ +..+.|--.++-
T Consensus 105 ~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p 138 (170)
T 1c3g_A 105 SKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMP 138 (170)
T ss_dssp EEEEECSSSCEEEEEESSCCCTTCEEECTTCSCB
T ss_pred eEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCC
Confidence 9999999996 8999984 445555555543
No 6
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=7.8e-22 Score=153.89 Aligned_cols=73 Identities=56% Similarity=0.853 Sum_probs=68.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g 151 (403)
....|||+||||+++|+.++||+|||+|++++|||++++++++.++|++|++||++|+||.+|+.||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 3456999999999999999999999999999999999987889999999999999999999999999997544
No 7
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.86 E-value=1.8e-22 Score=165.54 Aligned_cols=73 Identities=49% Similarity=0.802 Sum_probs=68.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCc
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~ 153 (403)
..|||+||||+++|+.+|||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||.++..+..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence 4699999999999999999999999999999999987788999999999999999999999999999876543
No 8
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.84 E-value=3.1e-21 Score=149.77 Aligned_cols=71 Identities=45% Similarity=0.776 Sum_probs=65.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCC
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~ 152 (403)
..|||+||||+++|+.++||+||++|++++|||++++ +.+.+.|++|++||++|+||.+|+.||.++..|.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 4699999999999999999999999999999999975 6788999999999999999999999999976553
No 9
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=2.8e-21 Score=157.30 Aligned_cols=72 Identities=39% Similarity=0.638 Sum_probs=67.5
Q ss_pred CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 77 CYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 77 ~~~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
..++..|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||...
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 346678999999999999999999999999999999999888889999999999999999999999999964
No 10
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=5e-21 Score=152.46 Aligned_cols=72 Identities=51% Similarity=0.858 Sum_probs=66.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g 151 (403)
....|||+||||+++|+.+|||+|||+|++++|||+++ ++.+.++|++|++||++|+||.+|+.||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 34569999999999999999999999999999999998 5788999999999999999999999999997544
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=5.1e-21 Score=150.34 Aligned_cols=73 Identities=47% Similarity=0.734 Sum_probs=66.5
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g 151 (403)
+...|||+||||+++|+.+|||+||++|++++|||+++.++ .+.++|++|++||++|+||.+|+.||.++..+
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 34579999999999999999999999999999999998654 57889999999999999999999999997554
No 12
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=6.2e-21 Score=148.41 Aligned_cols=72 Identities=44% Similarity=0.713 Sum_probs=66.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g 151 (403)
....|||+||||+++|+.+|||+||++|++++|||+++. +.+.++|++|++||++|+||.+|+.||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 345699999999999999999999999999999999974 778999999999999999999999999997544
No 13
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=151.59 Aligned_cols=74 Identities=45% Similarity=0.710 Sum_probs=67.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhhhccccCC
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~ 152 (403)
....|||+||||+++|+.+|||+|||+|++++|||+++.+. .++++|++|++||++|+||.+|+.||.++..+.
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 34569999999999999999999999999999999998653 688999999999999999999999999976543
No 14
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=7.2e-21 Score=158.36 Aligned_cols=73 Identities=37% Similarity=0.574 Sum_probs=68.5
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g 151 (403)
....|||+||||+++|+.+|||+|||+|++++|||++++++++.++|++|++||++|+||.+|+.||+++..+
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 4567999999999999999999999999999999999987889999999999999999999999999997654
No 15
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.6e-20 Score=149.58 Aligned_cols=70 Identities=49% Similarity=0.811 Sum_probs=65.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccc
Q 015636 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR 150 (403)
Q Consensus 80 ~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~ 150 (403)
...|||+||||+++|+.+|||+|||+|++++|||++++ +.+.++|++|++||++|+||.+|+.||.++..
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 45699999999999999999999999999999999985 67889999999999999999999999999654
No 16
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.3e-20 Score=156.00 Aligned_cols=73 Identities=45% Similarity=0.735 Sum_probs=68.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g 151 (403)
....|||+||||+++|+.+|||+|||+|++++|||++++++++.++|++|++||++|+||.+|+.||.++..|
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~ 86 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG 86 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence 4557999999999999999999999999999999999988889999999999999999999999999997554
No 17
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.81 E-value=2e-20 Score=143.67 Aligned_cols=68 Identities=38% Similarity=0.702 Sum_probs=61.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~ 149 (403)
....|||+||||+++|+.++||+||++|++++|||++++. .++|++|++||++|+||.+|+.||++|.
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 3457999999999999999999999999999999999753 5899999999999999999999999863
No 18
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=2.6e-20 Score=151.44 Aligned_cols=72 Identities=47% Similarity=0.738 Sum_probs=64.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCc
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~ 153 (403)
.|||+||||+++|+.+|||+|||+|++++|||++++.. .+.++|++|++||++|+||.+|+.||.++..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 48999999999999999999999999999999998653 5789999999999999999999999999765543
No 19
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.80 E-value=2.5e-20 Score=149.59 Aligned_cols=71 Identities=37% Similarity=0.659 Sum_probs=64.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCC
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~ 152 (403)
.+..|||+||||+++|+.+|||+|||+|++++|||+++++ .++|++|++||++|+||.+|+.||.++..+.
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 75 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAA 75 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence 4567999999999999999999999999999999999764 5799999999999999999999999976543
No 20
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.80 E-value=3.3e-20 Score=149.41 Aligned_cols=71 Identities=32% Similarity=0.597 Sum_probs=64.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hhHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN------PSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~ 149 (403)
+...|||+||||+++|+.+|||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||....
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4567999999999999999999999999999999998743 4578999999999999999999999999853
No 21
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=3.8e-20 Score=151.98 Aligned_cols=99 Identities=32% Similarity=0.658 Sum_probs=89.4
Q ss_pred CCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeC--C--ccccCCcCCCCcEEe
Q 015636 202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--P--FTSTCSTCKGLGRII 277 (403)
Q Consensus 202 g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--~--~~~~C~~C~G~G~~~ 277 (403)
|.|+.++|.|||+|||+|.++++.+.+.+.|+.|+|+|...+....+|+.|+|+|++.+. + ++.+|+.|+|.|+++
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i 80 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII 80 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC
Confidence 468899999999999999999999999999999999999888888999999999987542 2 367999999999999
Q ss_pred eeeeeEEeeceEEeceEEEEEEe
Q 015636 278 KDHCMTCKGSGVVDGVKEVKVTI 300 (403)
Q Consensus 278 ~~~C~~C~g~G~~~~~~~l~V~I 300 (403)
+++|..|.|.|++.+.+.|+|+|
T Consensus 81 ~~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 81 ISPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SSCCSSSSSCSEECCCCSSCCSC
T ss_pred CCcCCCCCCeeEEEEEEEEEEEc
Confidence 99999999999999888877654
No 22
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.76 E-value=3.1e-19 Score=147.71 Aligned_cols=70 Identities=34% Similarity=0.576 Sum_probs=64.5
Q ss_pred CCCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChhHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 015636 80 SKRDPYELLGVPENA-SQDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (403)
Q Consensus 80 ~~~~~Y~iLgv~~~a-s~~eIk~ayr~la~~~HPD~~~~---~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~ 149 (403)
...|||+||||+++| +.+|||+|||+|++++|||++++ .+.+.++|++|++||++|+||.+|+.||.++.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 357999999999999 99999999999999999999975 35688999999999999999999999999853
No 23
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.74 E-value=1.2e-18 Score=159.76 Aligned_cols=72 Identities=46% Similarity=0.760 Sum_probs=67.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCc
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~ 153 (403)
.|||+||||+++|+.+|||+|||+|++++|||++++++++.++|++|++||++|+||.+|+.||++|..+..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 489999999999999999999999999999999988888999999999999999999999999999766543
No 24
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.7e-18 Score=137.17 Aligned_cols=62 Identities=32% Similarity=0.552 Sum_probs=58.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhh
Q 015636 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQ 143 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~ 143 (403)
..|||+||||+++|+.+|||+|||+|+++||||++++ +.+.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 3699999999999999999999999999999999985 6788999999999999999999874
No 25
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.73 E-value=2.2e-18 Score=151.43 Aligned_cols=70 Identities=31% Similarity=0.588 Sum_probs=64.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------hHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP------SAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~------~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
+...|||+||||+++|+.++||+|||+|++++|||++++++ .+.++|++|++||++|+||.+|+.||..+
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 45679999999999999999999999999999999998753 26789999999999999999999999875
No 26
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.72 E-value=5.1e-18 Score=155.61 Aligned_cols=100 Identities=18% Similarity=0.329 Sum_probs=72.7
Q ss_pred ccccccccccccccccCCCCcchhhhhhhccccCCCCCCCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh
Q 015636 42 HKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNP 119 (403)
Q Consensus 42 ~~r~~~~c~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~Y~iLgv~~~--as~~eIk~ayr~la~~~HPD~~~~~~ 119 (403)
....||+|...... . ....+++..+... ++.....|||++|||+++ ++.++||+|||+|++++|||++++++
T Consensus 9 ~~~~Cw~C~~~~~~---~-~~~~~fC~~c~~~--q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~ 82 (207)
T 3bvo_A 9 NYPRCWNCGGPWGP---G-REDRFFCPQCRAL--QAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRS 82 (207)
T ss_dssp --CBCSSSCCBCCS---S-CSCCCBCTTTCCB--CCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSC
T ss_pred CCCCCCCCCCCccc---c-ccccccccccccc--CCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 46789999753110 1 1111222222221 222345799999999986 79999999999999999999998654
Q ss_pred h-----HHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 015636 120 S-----AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (403)
Q Consensus 120 ~-----a~~~f~~i~~Ay~vL~dp~~R~~yd~~ 147 (403)
. +.++|++|++||+||+||.+|+.||..
T Consensus 83 ~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~ 115 (207)
T 3bvo_A 83 QTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK 115 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 3 567899999999999999999999975
No 27
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.71 E-value=2.7e-18 Score=136.28 Aligned_cols=68 Identities=21% Similarity=0.238 Sum_probs=60.5
Q ss_pred CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhh
Q 015636 76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQ 143 (403)
Q Consensus 76 ~~~~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~ 143 (403)
...+...++|+||||+++|+.+|||+|||+|+++||||++++++ .++++|++|++||++|+|...|..
T Consensus 10 ~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 34455679999999999999999999999999999999998764 588999999999999999988743
No 28
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.69 E-value=1.2e-17 Score=129.99 Aligned_cols=62 Identities=18% Similarity=0.306 Sum_probs=56.5
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 82 ~~~Y~iLgv~~~--as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
.++|+||||+++ |+.++||+|||+|++++|||++++ .++|++|++||++|+|+.+|..+ .+|
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~-~~g 74 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRM-NLG 74 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTT-CCS
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHH-hcC
Confidence 489999999999 999999999999999999999864 58999999999999999999874 453
No 29
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.69 E-value=1.9e-17 Score=148.06 Aligned_cols=68 Identities=31% Similarity=0.515 Sum_probs=62.2
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 81 KRDPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 81 ~~~~Y~iLgv~~~as--~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
..|||+||||+++++ .++||+|||+|+++||||++++.+. +.++|+.|++||+||+||.+|+.||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 469999999999988 9999999999999999999987654 6689999999999999999999999864
No 30
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.68 E-value=2.7e-18 Score=142.76 Aligned_cols=64 Identities=23% Similarity=0.396 Sum_probs=59.8
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 015636 82 RDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~--~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~ 149 (403)
.+||+||||+++|+. ++||+|||+|++++|||++++ .++|++|++||+||+||.+|+.||.++.
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 589999999999999 999999999999999999875 4799999999999999999999998753
No 31
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.67 E-value=5.1e-18 Score=150.66 Aligned_cols=64 Identities=23% Similarity=0.391 Sum_probs=57.2
Q ss_pred CCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 015636 82 RDPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (403)
Q Consensus 82 ~~~Y~iLgv~~~as--~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~ 149 (403)
.|||+||||+++|+ .+|||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||++|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 58999999999998 6999999999999999999875 3789999999999999999999999974
No 32
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.66 E-value=5e-17 Score=144.90 Aligned_cols=66 Identities=30% Similarity=0.489 Sum_probs=61.3
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 83 DPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 83 ~~Y~iLgv~~~a--s~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
|||++|||++++ +.++||+|||+|+++||||++++.+. |.++|+.|++||+||+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 99999999999999999999987653 5579999999999999999999999974
No 33
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.65 E-value=5.6e-17 Score=144.82 Aligned_cols=66 Identities=21% Similarity=0.447 Sum_probs=60.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhhhhhhhhhh
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQY 144 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~vL~dp~~R~~y 144 (403)
+...|+|++|||+++|+.+|||+|||+|++++|||++++.+. |+++|++|++||++|+||.+|+.|
T Consensus 114 ~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 114 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 334699999999999999999999999999999999986553 789999999999999999999987
No 34
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.63 E-value=1.1e-16 Score=127.52 Aligned_cols=56 Identities=21% Similarity=0.440 Sum_probs=52.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHHhhh
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRD 137 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~vL~d 137 (403)
.++|++|||+++|+.+|||+|||++|++||||++++++ .|+++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999998765 378899999999999986
No 35
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2e-16 Score=120.57 Aligned_cols=59 Identities=15% Similarity=0.278 Sum_probs=52.9
Q ss_pred CCCCCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhh
Q 015636 79 SSKRDPYELLGVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~-~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R 141 (403)
+...++|+||||++ +|+.+|||+|||+|++++|||++++ .++|++|++||++|+|+..|
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhc
Confidence 44568999999999 7999999999999999999999753 46999999999999998766
No 36
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.59 E-value=3e-15 Score=141.23 Aligned_cols=138 Identities=24% Similarity=0.389 Sum_probs=101.5
Q ss_pred eEEEEEeeeccccCcceeccc-cceeecccCCCccccCC---------CccccCCCccceeEEEeCCc--cccCCcCCCC
Q 015636 206 QVELVLSFAEAAKGCTKHVSF-DAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPF--TSTCSTCKGL 273 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v~~-~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~--~~~C~~C~G~ 273 (403)
..++.++-...+..|...-.- .....|+.|+|+|.... ..+.+|+.|+|.|++ + ..+|+.|+|.
T Consensus 30 ~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~----i~~~~~C~~C~G~ 105 (248)
T 1nlt_A 30 TAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDI----IDPKDRCKSCNGK 105 (248)
T ss_dssp EEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSC----CCTTSBCSSSTTS
T ss_pred eEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEE----eccCCCCcccCCC
Confidence 445566655555444322211 12489999999997421 235789999999987 5 7899999999
Q ss_pred cEEeeeeeeEEeec-eEEeceE----------------------------------------------------------
Q 015636 274 GRIIKDHCMTCKGS-GVVDGVK---------------------------------------------------------- 294 (403)
Q Consensus 274 G~~~~~~C~~C~g~-G~~~~~~---------------------------------------------------------- 294 (403)
|.+.+.+-.++.++ |+.++++
T Consensus 106 g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~t 185 (248)
T 1nlt_A 106 KVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEH 185 (248)
T ss_dssp CEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEEC
T ss_pred ceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeC
Confidence 99999899999988 8888877
Q ss_pred ----EEEEEeCCC--CCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCC--ceeeCCeE
Q 015636 295 ----EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI--FSRDGADV 347 (403)
Q Consensus 295 ----~l~V~Ip~G--~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~--F~R~G~DL 347 (403)
.++|.|||| +++|++++|+|+|++...+...|||||+|+|+-+.. +..+..+|
T Consensus 186 ldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 186 VSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp SSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred CCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 589999999 999999999999999754446799999999996665 55554443
No 37
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.59 E-value=3.9e-16 Score=140.17 Aligned_cols=66 Identities=29% Similarity=0.491 Sum_probs=59.8
Q ss_pred CCCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 015636 80 SKRDPYELL------GVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (403)
Q Consensus 80 ~~~~~Y~iL------gv~~-~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~ 148 (403)
...|||+|| |+++ +|+.++||+|||+|++++|||++++ +.++|++|++||+||+||.+|+.||...
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 346999999 4665 9999999999999999999999975 5689999999999999999999999964
No 38
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=4.2e-16 Score=127.95 Aligned_cols=60 Identities=13% Similarity=0.200 Sum_probs=52.8
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----hHHHHHHHHHHHHHHhhhhh
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---NP----SAKRKFQEIRDAYETLRDSE 139 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~---~~----~a~~~f~~i~~Ay~vL~dp~ 139 (403)
+...|||+|||++. |+.+|||+|||+|++++|||++++ ++ .|+++|++|++||++|+|+.
T Consensus 38 ~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 38 WSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 44579999999996 999999999999999999999864 22 36889999999999999985
No 39
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.56 E-value=3.6e-16 Score=169.65 Aligned_cols=75 Identities=44% Similarity=0.730 Sum_probs=40.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCCc
Q 015636 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yd~~~~~g~~ 153 (403)
....|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|..|..
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~ 92 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 92 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccc
Confidence 445799999999999999999999999999999999987788999999999999999999999999999876644
No 40
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.28 E-value=1.2e-12 Score=101.55 Aligned_cols=74 Identities=38% Similarity=0.885 Sum_probs=64.3
Q ss_pred CcceeccccceeecccCCCccccCCCccccCCCccceeEEEeC----CccccCCcCCCCcEEeeeeeeEEeeceEEec
Q 015636 219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (403)
Q Consensus 219 G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~ 292 (403)
|.+++|.+.+.+.|+.|+|+|........+|+.|+|+|++... .++.+|+.|+|.|++++++|..|+|.|++.+
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~~~ 78 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER 78 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECCCcCCCCCCeEEEee
Confidence 6778899999999999999998877777899999999987532 1357999999999999999999999998754
No 41
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.15 E-value=2.7e-11 Score=99.74 Aligned_cols=46 Identities=28% Similarity=0.358 Sum_probs=43.0
Q ss_pred EcCCCceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCcEEEEEcCC
Q 015636 335 ADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKVIVL 380 (403)
Q Consensus 335 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~~ 380 (403)
+||+.|+|+|+||+++++|+|.||++|++++|+||||.++|+||++
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g 47 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPG 47 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTT
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCC
Confidence 6899999999999999999999999999999999999999999985
No 42
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.01 E-value=7.7e-11 Score=97.04 Aligned_cols=78 Identities=22% Similarity=0.342 Sum_probs=64.5
Q ss_pred CCCCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 200 ~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
+.|.|+.+++.|+|.||+.|+++.+..-
T Consensus 9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl---------------------------------------------------- 36 (109)
T 3i38_A 9 IVGHNLEIVLPLAPWEAALGAKVTVPTL---------------------------------------------------- 36 (109)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCS----------------------------------------------------
T ss_pred EECCEEEEEEEcCHHHHhCCCEEEEEcC----------------------------------------------------
Confidence 4588999999999999999988776520
Q ss_pred eeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeC
Q 015636 280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDG 344 (403)
Q Consensus 280 ~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G 344 (403)
++ .++|.||+|+++|++++|+|+|++. .+ .+|||||+|+|+-+.....+.
T Consensus 37 -----------dG--~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~Ls~~q 86 (109)
T 3i38_A 37 -----------KE--SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKPDEKA 86 (109)
T ss_dssp -----------SS--CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSCCHHH
T ss_pred -----------CC--CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCCCHHH
Confidence 12 3689999999999999999999997 34 789999999999776655444
No 43
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.96 E-value=2e-10 Score=96.37 Aligned_cols=82 Identities=21% Similarity=0.180 Sum_probs=62.5
Q ss_pred CCCCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 200 ~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
++|.|+.+++.|+|.+|+.|+++.+.--
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl---------------------------------------------------- 31 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV---------------------------------------------------- 31 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT----------------------------------------------------
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC----------------------------------------------------
Confidence 4588999999999999999987776410
Q ss_pred eeeEEeeceEEeceEEEEEEeCCC--CCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCC--ceeeCC
Q 015636 280 HCMTCKGSGVVDGVKEVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI--FSRDGA 345 (403)
Q Consensus 280 ~C~~C~g~G~~~~~~~l~V~Ip~G--~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~--F~R~G~ 345 (403)
++ +.++|+||+| +++|++++|+|+|++...+..+|||||+|+|+-+.. +..+..
T Consensus 32 -----------dG-~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~ 89 (121)
T 1xao_A 32 -----------SG-DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENL 89 (121)
T ss_dssp -----------TS-CEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHH
T ss_pred -----------CC-CEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHH
Confidence 11 2578999999 999999999999999754446899999999997665 555443
No 44
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.92 E-value=5.9e-10 Score=110.33 Aligned_cols=65 Identities=46% Similarity=0.710 Sum_probs=55.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 015636 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRDSEKRAQYDR 146 (403)
Q Consensus 82 ~~~Y~iLgv~~~as~~eIk~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~vL~dp~~R~~yd~ 146 (403)
.++|.+||+.+.++.++|+++|+++++++|||+.+.++ .++++|++|++||++|+||.+|..||.
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 48999999999999999999999999999999997642 478899999999999999999999997
No 45
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.6e-09 Score=90.87 Aligned_cols=42 Identities=31% Similarity=0.574 Sum_probs=40.0
Q ss_pred CceeeCCeEEEEeecCHhhhhcCCeEEeeCCCCc-EEEEEcCC
Q 015636 339 IFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKVIVL 380 (403)
Q Consensus 339 ~F~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~~ 380 (403)
.|+|+|+||+++++|+|.|||+|++++|+||||+ +.|+||++
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g 43 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPG 43 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTT
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCC
Confidence 4999999999999999999999999999999997 99999976
No 46
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.75 E-value=6.7e-09 Score=77.06 Aligned_cols=52 Identities=17% Similarity=0.232 Sum_probs=45.7
Q ss_pred CcccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 015636 83 DPYELLGVPEN---ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138 (403)
Q Consensus 83 ~~Y~iLgv~~~---as~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~dp 138 (403)
.-|.||||+++ ++.++|+++||+|....|||+.++ .-...+|++|+++|...
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 56899999999 999999999999999999999764 35667899999999754
No 47
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.74 E-value=8.3e-09 Score=92.48 Aligned_cols=48 Identities=19% Similarity=0.285 Sum_probs=40.7
Q ss_pred EEEEEeCCCCCCCCEEEEcCCccCCCC-CCCcccEEEEEEEEcCCCcee
Q 015636 295 EVKVTIPAGVDSGDTIRVPEAGNAGGR-GRQHGNLFIKLKVADDPIFSR 342 (403)
Q Consensus 295 ~l~V~Ip~G~~~G~~i~l~g~G~~~~~-g~~~GDL~v~i~v~~h~~F~R 342 (403)
.++|.||+|+++|++++|+|+|++... .+.+|||||+|+|+-+..++.
T Consensus 121 ~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~ 169 (181)
T 3agx_A 121 TIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQ 169 (181)
T ss_dssp EEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCH
T ss_pred EEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCH
Confidence 688999999999999999999999754 356899999999997665543
No 48
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.66 E-value=8e-09 Score=92.51 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=64.1
Q ss_pred CCCCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 200 ~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
+.|.|+.+++.|+|.||+.|+++.+.--
T Consensus 90 R~G~DL~~~~~Isl~eAllG~~i~v~tl---------------------------------------------------- 117 (180)
T 2q2g_A 90 RDDCHLIMKVTIPLVRALTGFTCPVTTL---------------------------------------------------- 117 (180)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT----------------------------------------------------
T ss_pred EcCCEEEEEEEcCHHHHhCCCEEEeeCC----------------------------------------------------
Confidence 4689999999999999999987776521
Q ss_pred eeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCC-CCcccEEEEEEEEcCCCcee
Q 015636 280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRG-RQHGNLFIKLKVADDPIFSR 342 (403)
Q Consensus 280 ~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g-~~~GDL~v~i~v~~h~~F~R 342 (403)
++. .++|.||+|+++|++++|+|+|++...+ +.+|||||+|+|+-+..+..
T Consensus 118 -----------dG~-~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~ 169 (180)
T 2q2g_A 118 -----------DNR-NLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTP 169 (180)
T ss_dssp -----------TCC-EEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCH
T ss_pred -----------CCC-EEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCH
Confidence 122 5788899999999999999999996533 46899999999996665543
No 49
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.55 E-value=1.1e-08 Score=90.68 Aligned_cols=78 Identities=27% Similarity=0.342 Sum_probs=63.2
Q ss_pred CCCCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 200 ~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
+.|.|+.+++.|+|.||+.|+++.+.--
T Consensus 84 R~G~DL~~~~~Isl~eAllG~~~~v~tl---------------------------------------------------- 111 (170)
T 1c3g_A 84 RDGDDLIYTLPLSFKESLLGFSKTIQTI---------------------------------------------------- 111 (170)
T ss_dssp EETTEEEEEECCBHHHHHHCEEEEEECS----------------------------------------------------
T ss_pred EeCCcEeEEEEcCHHHHhCCCeEEeeCC----------------------------------------------------
Confidence 4689999999999999999988776511
Q ss_pred eeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCC-CCcccEEEEEEEEcCCCce
Q 015636 280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRG-RQHGNLFIKLKVADDPIFS 341 (403)
Q Consensus 280 ~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g-~~~GDL~v~i~v~~h~~F~ 341 (403)
++ +.++|.||+|+++|++++|+|+|++...+ +.+|||||+|+|.-+..+.
T Consensus 112 -----------dG-~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls 162 (170)
T 1c3g_A 112 -----------DG-RTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLN 162 (170)
T ss_dssp -----------SS-CEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCC
T ss_pred -----------CC-CEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCC
Confidence 12 24678899999999999999999996533 3579999999999665544
No 50
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.39 E-value=2.3e-07 Score=90.66 Aligned_cols=78 Identities=22% Similarity=0.349 Sum_probs=62.7
Q ss_pred CCCCCceEEEEEeeeccccCcceeccccceeecccCCCccccCCCccccCCCccceeEEEeCCccccCCcCCCCcEEeee
Q 015636 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (403)
Q Consensus 200 ~~g~di~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (403)
+.|.|+.+++.|+|.||+.|+++.|.-
T Consensus 229 R~G~DL~~~~~Isl~eAllG~~v~Vpt----------------------------------------------------- 255 (329)
T 3lz8_A 229 IVGHNLEIVLPLAPWEAALGAKVTVPT----------------------------------------------------- 255 (329)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECC-----------------------------------------------------
T ss_pred EcCCcEEEEEECCHHHHcCCCeEEEEC-----------------------------------------------------
Confidence 357889999999999999998777651
Q ss_pred eeeEEeeceEEeceEEEEEEeCCCCCCCCEEEEcCCccCCCCCCCcccEEEEEEEEcCCCceeeC
Q 015636 280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDG 344 (403)
Q Consensus 280 ~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~F~R~G 344 (403)
.++. ++|+||+|+++|++++|+|+|+|.. ..+|||||+|+|.-+.....+.
T Consensus 256 ----------LdG~--v~l~ip~gt~~g~~~rl~G~GmP~~--~~rGDL~v~~~V~~P~~l~~~q 306 (329)
T 3lz8_A 256 ----------LKES--ILLTVPPGSQAGQRLRIKGKGLVSK--THTGDLFAVIKIVMPTKPDEKA 306 (329)
T ss_dssp ----------SSSC--EEEEECTTCCTTCEEEETTCSCBCS--SCBCCEEEEEEECCCSSCCHHH
T ss_pred ----------CCCC--EEEEECCCCCCCCEEEEcCCCCCCC--CCCCCEEEEEEEECCCCCCHHH
Confidence 1232 4789999999999999999999965 4689999999999666554443
No 51
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.92 E-value=4.4e-06 Score=64.14 Aligned_cols=48 Identities=29% Similarity=0.769 Sum_probs=38.7
Q ss_pred cceeecccCCCccccCCC-----ccccCCCccceeEEEeCCccccCCcCCCCcEEee
Q 015636 227 DAFVPCDSCHGRGFPADA-----KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (403)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~-----~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (403)
.....|+.|+|+|..... ...+|+.|+|.|.+ +..+|+.|+|.|.+.+
T Consensus 26 ~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~G~~~~ 78 (79)
T 1exk_A 26 TQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL----IKDPCNKCHGHGRVER 78 (79)
T ss_dssp SCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE----CSSBCGGGTTSSEEEC
T ss_pred ccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEE----CCCcCCCCCCeEEEee
Confidence 345799999999975321 24689999999998 6789999999998753
No 52
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.88 E-value=4.2e-06 Score=67.90 Aligned_cols=53 Identities=25% Similarity=0.593 Sum_probs=42.2
Q ss_pred ceeecccCCCccccCC-----CccccCCCccceeEEEeCCccccCCcCCCCcEEeeeeeeEE
Q 015636 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTC 284 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C 284 (403)
....|+.|+|+|.... ....+|+.|+|.|++ +..+|+.|+|.|++.+.+-.++
T Consensus 44 ~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----i~~~C~~C~G~G~v~~~k~l~V 101 (104)
T 2ctt_A 44 KVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSI----IISPCVVCRGAGQAKQKKRSGP 101 (104)
T ss_dssp CCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEE----CSSCCSSSSSCSEECCCCSSCC
T ss_pred CCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceE----CCCcCCCCCCeeEEEEEEEEEE
Confidence 4578999999996531 225689999999998 7889999999999876654443
No 53
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.40 E-value=1.2e-05 Score=84.66 Aligned_cols=51 Identities=14% Similarity=0.266 Sum_probs=46.5
Q ss_pred eEEEEEeeeccccCcceeccccceeecccCCCccccCCC---ccccCCCcccee
Q 015636 206 QVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADA---KTKICSTCRGIG 256 (403)
Q Consensus 206 ~~~l~ltlee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~---~~~~C~~C~G~G 256 (403)
.+.+.|+|+|++.|.++++.+.+...|..|+|+|...+. ...+|+.|+|..
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~ 221 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSK 221 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCc
Confidence 467889999999999999999999999999999998876 578999999983
No 54
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.17 E-value=0.00018 Score=50.83 Aligned_cols=25 Identities=40% Similarity=0.917 Sum_probs=12.2
Q ss_pred cCCCccceeEEEeCCccccCCcCCCCcEE
Q 015636 248 ICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (403)
Q Consensus 248 ~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (403)
+|+.|+|+|.+ +..+|+.|+|.|.+
T Consensus 11 ~C~~C~GsG~~----i~~~C~~C~G~G~v 35 (53)
T 3lcz_A 11 TCPNCNGSGRE----EPEPCPKCLGKGVI 35 (53)
T ss_dssp ECTTTTTSCEE----TTEECTTTTTSSEE
T ss_pred cCcCCcccccC----CCCcCCCCCCcEEE
Confidence 44444444444 34455555555544
No 55
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.07 E-value=8.5e-05 Score=52.51 Aligned_cols=30 Identities=37% Similarity=0.836 Sum_probs=21.3
Q ss_pred ccccCCcCCCCcEEeeeeeeEEeeceEEec
Q 015636 263 FTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (403)
Q Consensus 263 ~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~ 292 (403)
++.+|+.|+|+|.++.++|..|+|.|++.+
T Consensus 8 ~~~~C~~C~GsG~~i~~~C~~C~G~G~v~~ 37 (53)
T 3lcz_A 8 LETTCPNCNGSGREEPEPCPKCLGKGVILT 37 (53)
T ss_dssp HEEECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred eeccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence 456777777777777777777777776554
No 56
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.90 E-value=0.00043 Score=48.84 Aligned_cols=26 Identities=31% Similarity=0.736 Sum_probs=12.7
Q ss_pred eecccCCCccccCCCccccCCCccceeEE
Q 015636 230 VPCDSCHGRGFPADAKTKICSTCRGIGRV 258 (403)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~ 258 (403)
+.|+.|+|+|... ..+|+.|+|.|.+
T Consensus 10 ~~C~~C~GsG~~~---~~~C~~C~G~G~v 35 (53)
T 2bx9_A 10 VACPKCERAGEIE---GTPCPACSGKGVI 35 (53)
T ss_dssp EECTTTTTSSEET---TEECTTTTTSSEE
T ss_pred ccCCCCcceeccC---CCCCccCCCCccE
Confidence 4566666655542 1344444444443
No 57
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=95.88 E-value=0.0015 Score=45.98 Aligned_cols=29 Identities=28% Similarity=0.762 Sum_probs=23.2
Q ss_pred cccCCCccceeEEEeCCccccCCcCCCCcEEee
Q 015636 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (403)
Q Consensus 246 ~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (403)
..+|+.|+|+|.+ ...+|+.|+|.|.++.
T Consensus 9 ~~~C~~C~GsG~~----~~~~C~~C~G~G~v~~ 37 (53)
T 2bx9_A 9 EVACPKCERAGEI----EGTPCPACSGKGVILT 37 (53)
T ss_dssp EEECTTTTTSSEE----TTEECTTTTTSSEEEC
T ss_pred cccCCCCcceecc----CCCCCccCCCCccEEE
Confidence 4578999999887 5678888888888764
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.88 E-value=0.31 Score=51.41 Aligned_cols=48 Identities=15% Similarity=0.267 Sum_probs=38.3
Q ss_pred CCCCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHH
Q 015636 79 SSKRDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYET 134 (403)
Q Consensus 79 ~~~~~~Y~iLgv~~~as~--~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~v 134 (403)
...++||.+||++.++.. .+|++|||+||+..+++ .+++..|..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 445579999999777655 77999999999975433 5789999999876
No 59
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=49.88 E-value=32 Score=31.86 Aligned_cols=12 Identities=42% Similarity=0.670 Sum_probs=7.8
Q ss_pred ccCCcCCCCcEE
Q 015636 265 STCSTCKGLGRI 276 (403)
Q Consensus 265 ~~C~~C~G~G~~ 276 (403)
..|+.|+++|..
T Consensus 157 ~~Cp~C~~~~f~ 168 (279)
T 1ltl_A 157 SLCSECGGRSFR 168 (279)
T ss_dssp SCCTTTCCCCEE
T ss_pred CcCCCCCCCCcE
Confidence 357777777743
No 60
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=44.98 E-value=9.1 Score=37.76 Aligned_cols=20 Identities=30% Similarity=0.351 Sum_probs=16.0
Q ss_pred EEEEEeCCCCCCCCEEEEcC
Q 015636 295 EVKVTIPAGVDSGDTIRVPE 314 (403)
Q Consensus 295 ~l~V~Ip~G~~~G~~i~l~g 314 (403)
.|.+.||||...|..-.+.|
T Consensus 93 EL~~eI~pg~~~G~iTTVEG 112 (404)
T 2qkd_A 93 ELDFEIPAFSQKGALTTVEG 112 (404)
T ss_dssp GGTEEECTTSSCCEEEEHHH
T ss_pred eeeEEecCccCCceEEeHHH
Confidence 45678899998888888876
No 61
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=42.10 E-value=4.4 Score=40.01 Aligned_cols=19 Identities=11% Similarity=0.149 Sum_probs=13.0
Q ss_pred EEEEeCCCCCCCCEEEEcC
Q 015636 296 VKVTIPAGVDSGDTIRVPE 314 (403)
Q Consensus 296 l~V~Ip~G~~~G~~i~l~g 314 (403)
|.+.||||...|..-.+.|
T Consensus 302 L~lei~pg~~~G~~TTVEG 320 (404)
T 2qkd_A 302 LEFELGMAVLGGKFTTLEG 320 (404)
T ss_dssp GTEEECTTTTCSEEEEHHH
T ss_pred eeEEecCCCCCceEEeHHH
Confidence 4566777777777777665
No 62
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=31.65 E-value=34 Score=25.75 Aligned_cols=50 Identities=18% Similarity=0.237 Sum_probs=27.7
Q ss_pred ceeecccCCCccccCCCc--cccCCCccceeEEEeC----CccccCCcCCCCcEEe
Q 015636 228 AFVPCDSCHGRGFPADAK--TKICSTCRGIGRVTIP----PFTSTCSTCKGLGRII 277 (403)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~--~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~ 277 (403)
+.+.|..|+..|.....= ...|..|...|.+... .-...|-.|+..|.+-
T Consensus 4 k~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~p~~~~~CYnCG~~GH~~ 59 (83)
T 3nyb_B 4 KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVLPFHTIYCYNCGGKGHFG 59 (83)
T ss_dssp ---CCSSSCCSSSCGGGCGGGTCCCCBC-------------CCCBCSSSSCBSSCG
T ss_pred ccCCCCCCCCCCCccccCCCcccccccccCCcccccccCCCCCCeecccCCCCcCc
Confidence 456799999998765432 2368888888875322 1256799999888753
No 63
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=28.14 E-value=57 Score=22.96 Aligned_cols=48 Identities=23% Similarity=0.311 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHH---HHHHHHhhh-hh-hhhhhhhc
Q 015636 97 DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEI---RDAYETLRD-SE-KRAQYDRR 147 (403)
Q Consensus 97 ~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i---~~Ay~vL~d-p~-~R~~yd~~ 147 (403)
+|..+||.+|.+...=|..- .-++..+.| ..-|.+|.| |. ++++|+.|
T Consensus 3 eEae~aF~~lL~~~~V~s~w---sweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y 55 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTW---SFSRIISELGTRDPRYWMVDDDPLWKKEMFEKY 55 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSC---CHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCC---cHHHHHHHhccCCCccccccCCHHHHHHHHHHH
Confidence 57889999999887543332 245556666 467999997 75 66778876
No 64
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=27.31 E-value=80 Score=23.30 Aligned_cols=53 Identities=19% Similarity=0.285 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCCh--hHHHHHHHHHHHHHHhhh-hhhhhhhhhcc
Q 015636 95 SQDEIKKAFHMLAKQYHPDANKNNP--SAKRKFQEIRDAYETLRD-SEKRAQYDRRR 148 (403)
Q Consensus 95 s~~eIk~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vL~d-p~~R~~yd~~~ 148 (403)
-..-++.+|+.+.+...|....... .+..+|..-. +|..+.+ ..++.+|+.|.
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi 62 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFM 62 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHH
Confidence 3556899999999988888776543 3555666544 7998865 57777888874
No 65
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=26.89 E-value=27 Score=33.04 Aligned_cols=11 Identities=18% Similarity=0.628 Sum_probs=7.3
Q ss_pred cceeecccCCC
Q 015636 227 DAFVPCDSCHG 237 (403)
Q Consensus 227 ~~~~~C~~C~G 237 (403)
.....||.|.+
T Consensus 180 ~~~~~CPvCGs 190 (309)
T 2fiy_A 180 ESRTLCPACGS 190 (309)
T ss_dssp TTCSSCTTTCC
T ss_pred ccCCCCCCCCC
Confidence 34567888876
No 66
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=21.00 E-value=1.4e+02 Score=24.16 Aligned_cols=44 Identities=18% Similarity=0.339 Sum_probs=29.7
Q ss_pred EEEEEeCCCCCCCCEEEEcCCccCCCC--------C-CCcccEEEEEEEEcCC
Q 015636 295 EVKVTIPAGVDSGDTIRVPEAGNAGGR--------G-RQHGNLFIKLKVADDP 338 (403)
Q Consensus 295 ~l~V~Ip~G~~~G~~i~l~g~G~~~~~--------g-~~~GDL~v~i~v~~h~ 338 (403)
..+-.||.|+++|+.|++.|.=.+... + ....|+.++++...+.
T Consensus 7 P~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~ 59 (138)
T 3zxf_A 7 PHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 (138)
T ss_dssp CEEEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTT
T ss_pred CEEeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCC
Confidence 356689999999999999986432211 1 1245788888777543
No 67
>4h4n_A Hypothetical protein BA_2335; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.10A {Bacillus anthracis}
Probab=20.39 E-value=65 Score=22.38 Aligned_cols=21 Identities=24% Similarity=0.195 Sum_probs=17.1
Q ss_pred cEEEEEcCCCeeeeeeeeeee
Q 015636 372 KVQVKVIVLSLLLLLFYSLIY 392 (403)
Q Consensus 372 ~~~l~ip~~~~~~~~~~~~~~ 392 (403)
.+.++||+.|.|-+|||+-+-
T Consensus 8 pi~fkvppnsklkvtffgp~n 28 (67)
T 4h4n_A 8 PIAFKVPPNSKLKVTFFGPYN 28 (67)
T ss_dssp CEEEEECTTEEEEEEEECTTS
T ss_pred ceEEEcCCCCeeEEEEecchh
Confidence 367899999999999997543
No 68
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=20.22 E-value=69 Score=25.45 Aligned_cols=29 Identities=21% Similarity=0.502 Sum_probs=14.9
Q ss_pred cceeecccCCCccccCCCccc-cCCCcccee
Q 015636 227 DAFVPCDSCHGRGFPADAKTK-ICSTCRGIG 256 (403)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~-~C~~C~G~G 256 (403)
...-.|..|+-.-.. ..... .||.|++..
T Consensus 71 p~~~~C~~CG~~~e~-~~~~~~~CP~Cgs~~ 100 (119)
T 2kdx_A 71 KVELECKDCSHVFKP-NALDYGVCEKCHSKN 100 (119)
T ss_dssp CCEEECSSSSCEECS-CCSTTCCCSSSSSCC
T ss_pred cceEEcCCCCCEEeC-CCCCCCcCccccCCC
Confidence 345677777544322 22234 566665553
No 69
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=20.07 E-value=53 Score=23.24 Aligned_cols=10 Identities=20% Similarity=0.640 Sum_probs=4.8
Q ss_pred cccCCcCCCC
Q 015636 264 TSTCSTCKGL 273 (403)
Q Consensus 264 ~~~C~~C~G~ 273 (403)
...|+.|++.
T Consensus 18 k~~CP~CG~~ 27 (60)
T 2apo_B 18 KEICPKCGEK 27 (60)
T ss_dssp SSBCSSSCSB
T ss_pred cccCcCCCCc
Confidence 3445555543
Done!