BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015637
(403 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3K2B|A Chain A, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|B Chain B, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|C Chain C, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|D Chain D, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|E Chain E, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|F Chain F, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|G Chain G, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|H Chain H, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|O Chain O, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|Q Chain Q, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3QV1|A Chain A, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|B Chain B, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|C Chain C, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|D Chain D, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|E Chain E, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|F Chain F, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3RVD|A Chain A, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|B Chain B, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|C Chain C, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|D Chain D, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|E Chain E, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|F Chain F, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|G Chain G, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|H Chain H, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|O Chain O, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|Q Chain Q, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana
Length = 337
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 256/337 (75%), Positives = 267/337 (79%)
Query: 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADV 126
AKLKVAINGFGRIGRNFLRCWHGRKDSPL+++AINDTGGVKQASHLLKYDSTLGIF+ADV
Sbjct: 1 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTGGVKQASHLLKYDSTLGIFDADV 60
Query: 127 KPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186
KP G ISVDGK+IQVVSNRNP LPW +LGID+VIEGTGVFVDREGAGKHI+AGAKKV
Sbjct: 61 KPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKV 120
Query: 187 LITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 246
+ITAPGKGDIPTYVVGVNADAY DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT
Sbjct: 121 IITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 180
Query: 247 HSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
HSYTGDQ NIVPTST NGIALRVPTPN
Sbjct: 181 HSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPN 240
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
SKKTFAEEVNAAFR+SA+ ELKGIL VCDEPLVSVDFRC
Sbjct: 241 VSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSL 300
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 403
MGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK
Sbjct: 301 TMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 337
>pdb|1NBO|O Chain O, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|A Chain A, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|B Chain B, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1RM4|O Chain O, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|A Chain A, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|B Chain B, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|2HKI|A Chain A, Crystal Structure Of Photosynthetic
Glyceraldehyde-3-Phosphate Dehydrogenase A4 Isoform
pdb|2PKQ|P Chain P, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|R Chain R, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|S Chain S, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 337
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/336 (74%), Positives = 262/336 (77%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVK 127
KLKVAINGFGRIGRNFLRCWHGRKDSPL+VV INDTGGVKQASHLLKYDS LG F+ADVK
Sbjct: 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVK 60
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
G ISVDGKVI+VVS+RNPVNLPWGD+GIDLVIEGTGVFVDR+GAGKH+QAGAKKVL
Sbjct: 61 TAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL 120
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
ITAPGKGDIPTYVVGVN + Y + IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH
Sbjct: 121 ITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 180
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYTGDQ NIVPTST NGIALRVPTPN
Sbjct: 181 SYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV 240
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
SKKTFAEEVNAAFRESADNELKGILSVCDEPLVS+DFRC
Sbjct: 241 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLT 300
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 403
MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct: 301 MVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 336
>pdb|1RM5|O Chain O, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|A Chain A, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|B Chain B, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/336 (74%), Positives = 262/336 (77%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVK 127
KLKVAINGFGRIGRNFLRCWHGRKDSPL+VV INDTGGVKQASHLLKYDS LG F+ADVK
Sbjct: 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVK 60
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
G ISVDGKVI+VVS+RNPVNLPWGD+GIDLVIEGTGVFVDR+GAGKH+QAGAKKVL
Sbjct: 61 TAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL 120
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
ITAPGKGDIPTYVVGVN + Y + IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH
Sbjct: 121 ITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 180
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYTGDQ NIVPTST NGIALRVPTPN
Sbjct: 181 SYTGDQRLLDAAHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV 240
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
SKKTFAEEVNAAFRESADNELKGILSVCDEPLVS+DFRC
Sbjct: 241 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLT 300
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 403
MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct: 301 MVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 336
>pdb|2PKR|O Chain O, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|R Chain R, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|P Chain P, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|Q Chain Q, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|A Chain A, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|B Chain B, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|C Chain C, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|D Chain D, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|H Chain H, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|I Chain I, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|L Chain L, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|M Chain M, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
Length = 365
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/336 (74%), Positives = 262/336 (77%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVK 127
KLKVAINGFGRIGRNFLRCWHGRKDSPL+VV INDTGGVKQASHLLKYDS LG F+ADVK
Sbjct: 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVK 60
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
G ISVDGKVI+VVS+RNPVNLPWGD+GIDLVIEGTGVFVDR+GAGKH+QAGAKKVL
Sbjct: 61 TAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL 120
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
ITAPGKGDIPTYVVGVN + Y + IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH
Sbjct: 121 ITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 180
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYTGDQ NIVPTST NGIALRVPTPN
Sbjct: 181 SYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV 240
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
SKKTFAEEVNAAFRESADNELKGILSVCDEPLVS+DFRC
Sbjct: 241 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLT 300
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 403
MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct: 301 MVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 336
>pdb|1RM3|O Chain O, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|A Chain A, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|B Chain B, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 503 bits (1296), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/336 (74%), Positives = 261/336 (77%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVK 127
KLKVAINGFGRIGRNFLRCWHGRKDSPL+VV IND GGVKQASHLLKYDS LG F+ADVK
Sbjct: 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDAGGVKQASHLLKYDSILGTFDADVK 60
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
G ISVDGKVI+VVS+RNPVNLPWGD+GIDLVIEGTGVFVDR+GAGKH+QAGAKKVL
Sbjct: 61 TAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL 120
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
ITAPGKGDIPTYVVGVN + Y + IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH
Sbjct: 121 ITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 180
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYTGDQ NIVPTST NGIALRVPTPN
Sbjct: 181 SYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV 240
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
SKKTFAEEVNAAFRESADNELKGILSVCDEPLVS+DFRC
Sbjct: 241 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLT 300
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 403
MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct: 301 MVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 336
>pdb|1JN0|O Chain O, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|A Chain A, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|B Chain B, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
Length = 335
Score = 491 bits (1263), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/336 (73%), Positives = 259/336 (77%), Gaps = 2/336 (0%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVK 127
KLKVAINGFGRIGRNFLRCWHG KDSPL+VV INDTGGVKQASHLLKYDS LG F+ADVK
Sbjct: 1 KLKVAINGFGRIGRNFLRCWHG-KDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVK 59
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
G ISV GKVI+VVS+RNPVNLPWGD+GIDLVIEGTGVFVDR+GAGKH+QAGAKKVL
Sbjct: 60 TAGDSAISV-GKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL 118
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
ITAPGKGDIPTYVVGVN + Y + IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH
Sbjct: 119 ITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 178
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYTGDQ NIVPTST NGIALRVPTPN
Sbjct: 179 SYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNV 238
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
SKKTFAEEVNAAFRESAD ELKGILSVCDEPLVS+DFRC
Sbjct: 239 SVVDLVVQVSKKTFAEEVNAAFRESADQELKGILSVCDEPLVSIDFRCTDVSSTIDSSLT 298
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 403
MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct: 299 MVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 334
>pdb|2PKQ|O Chain O, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|Q Chain Q, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|T Chain T, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 368
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/338 (64%), Positives = 241/338 (71%), Gaps = 3/338 (0%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVK 127
KLKVAINGFGRIGRNFLRCWHGRKDSPL+VV +ND+GGVK A+HLLKYDS LG F+ADVK
Sbjct: 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVK 60
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
+ + S+DGK I+VVSNR+P+ LPW +LGID+VIEGTGVFVD GAGKHIQAGAKKV+
Sbjct: 61 IIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVI 120
Query: 188 ITAPGKG-DIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 245
ITAP KG DIPTYVVGVN Y D IISNASCTTNCLAPFVKVLD++ GI+KGTMTT
Sbjct: 121 ITAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTT 180
Query: 246 THSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTP 305
THSYTGDQ NIVPTST NGIALRVPTP
Sbjct: 181 THSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTP 240
Query: 306 NXXXXXXXXXXSK-KTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXX 364
N K AE+VN AFR++A LKG+L VCD PLVSVDFRC
Sbjct: 241 NVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDS 300
Query: 365 XXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 402
MG DMVKV+AWYDNEWGYSQRVVDLAD+VAN W
Sbjct: 301 SLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKW 338
>pdb|3B1J|A Chain A, Crystal Structure Of Dehydrogenese
pdb|3B1J|B Chain B, Crystal Structure Of Dehydrogenese
pdb|3B1K|A Chain A, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|B Chain B, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|G Chain G, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|H Chain H, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B20|A Chain A, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|B Chain B, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|O Chain O, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|P Chain P, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|Q Chain Q, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|R Chain R, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
Length = 339
Score = 352 bits (904), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/336 (54%), Positives = 217/336 (64%), Gaps = 3/336 (0%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
++VAINGFGRIGRNFLRCW GR+++ LEVVAIN+T + A+HLL+YDS LG F AD+
Sbjct: 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADIS- 61
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
+ I+V+GK +++V +RNP+NLPW + IDLVIE TGVFV EGA KHIQAGAKKVLI
Sbjct: 62 YDENSITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLI 121
Query: 189 TAPGKGD-IPTYVVGVNADAYK-PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 246
TAPGKG+ + TYV+GVN Y+ D +ISNASCTTNCLAP KVL FGIIKGTMTTT
Sbjct: 122 TAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTT 181
Query: 247 HSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
HSYT DQ NIVPT+T NGIALRVPTPN
Sbjct: 182 HSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPN 241
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
K T E+VN ++++ +KGI+ D PLVS DFR
Sbjct: 242 VSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSL 301
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 402
M D+VKVIAWYDNEWGYSQRVVDLA++ A W
Sbjct: 302 TLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARKW 337
>pdb|2D2I|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|B Chain B, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|O Chain O, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|P Chain P, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|Q Chain Q, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|R Chain R, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2DUU|A Chain A, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|B Chain B, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|O Chain O, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|P Chain P, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|Q Chain Q, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|R Chain R, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp
Length = 380
Score = 347 bits (889), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 180/333 (54%), Positives = 215/333 (64%), Gaps = 3/333 (0%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
++VAINGFGRIGRNFLRCW GR+++ LEVVAIN+T + A+HLL+YDS LG F AD+
Sbjct: 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADIS- 61
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
+ I+V+GK +++V +RNP+NLPW + IDLVIE TGVFV EGA KHIQAGAKKVLI
Sbjct: 62 YDENSITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLI 121
Query: 189 TAPGKGD-IPTYVVGVNADAYK-PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 246
TAPGK + + TYV+GVN Y+ D +ISNASCTTNCLAP KVL FGIIKGTMTTT
Sbjct: 122 TAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTT 181
Query: 247 HSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
HSYT DQ NIVPT+T NGIALRVPTPN
Sbjct: 182 HSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPN 241
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
K T E+VN ++++ +KGI+ D PLVS DFR
Sbjct: 242 VSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSL 301
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 399
M D+VKVIAWYDNEWGYSQRVVDLA++ A
Sbjct: 302 TLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAA 334
>pdb|3DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|4DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 302 bits (773), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 202/333 (60%), Gaps = 4/333 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGRN R K+ +EVVA+NDTGG +HLLKYDS G +A+V
Sbjct: 2 VKVGINGFGRIGRNVFRA--ALKNPDIEVVAVNDTGGANTLAHLLKYDSVHGRLDAEVS- 58
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + + V+GK I V + R+P NL WG++G+D+V+E TG F RE A KH++AGAKKV+I
Sbjct: 59 VNGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVII 118
Query: 189 TAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
+AP K + T V+GVN D Y P +ISNASCTTNCLAPF KVL ++FGI++G MTT H
Sbjct: 119 SAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVH 178
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYT DQ +I+PT+T NG+A+RVPTPN
Sbjct: 179 SYTNDQRILDASHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K+ EEVNAA + +A+ ELKGIL+ +EPLVS D+
Sbjct: 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALST 298
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
+ MVKV++WYDNE GYS RVVDLA +A+
Sbjct: 299 MVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 331
>pdb|1GD1|O Chain O, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|P Chain P, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|Q Chain Q, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|2GD1|O Chain O, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|P Chain P, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|Q Chain Q, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|R Chain R, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|3CMC|O Chain O, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|P Chain P, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|Q Chain Q, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|R Chain R, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
Length = 334
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/333 (46%), Positives = 199/333 (59%), Gaps = 4/333 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGRN R K+ +EVVA+ND +HLLKYDS G +A+V
Sbjct: 2 VKVGINGFGRIGRNVFRA--ALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVS- 58
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + + V+GK I V + R+P NL WG++G+D+V+E TG F RE A KH++AGAKKV+I
Sbjct: 59 VNGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVII 118
Query: 189 TAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
+AP K + T V+GVN D Y P +ISNASCTTNCLAPF KVL ++FGI++G MTT H
Sbjct: 119 SAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVH 178
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYT DQ +I+PT+T NG+A+RVPTPN
Sbjct: 179 SYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K+ EEVNAA + +A+ ELKGIL+ +EPLVS D+
Sbjct: 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALST 298
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
+ MVKV++WYDNE GYS RVVDLA +A+
Sbjct: 299 MVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 331
>pdb|1DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|2DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 291 bits (745), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/333 (45%), Positives = 198/333 (59%), Gaps = 4/333 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGRN R K+ +EVVA+N +HLLKYDS G +A+V
Sbjct: 2 VKVGINGFGRIGRNVFRA--ALKNPDIEVVAVNGLTDANTLAHLLKYDSVHGRLDAEVS- 58
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + + V+GK I V + R+P NL WG++G+D+V+E TG F RE A KH++AGAKKV+I
Sbjct: 59 VNGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVII 118
Query: 189 TAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
+AP K + T V+GVN D Y P +ISNASCTTNCLAPF KVL ++FGI++G MTT H
Sbjct: 119 SAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVH 178
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYT DQ +I+PT+T NG+A+RVPTPN
Sbjct: 179 SYTNDQRILDASHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K+ EEVNAA + +A+ ELKGIL+ +EPLVS D+
Sbjct: 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALST 298
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
+ MVKV++WYDNE GYS RVVDLA +A+
Sbjct: 299 MVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 331
>pdb|1NPT|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NQA|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
Length = 334
Score = 290 bits (741), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/333 (45%), Positives = 198/333 (59%), Gaps = 4/333 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGRN R K+ +EVVA+ND +HLLKYDS G +A+V
Sbjct: 2 VKVGINGFGRIGRNVFRA--ALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVS- 58
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + + V+GK I V + R+P NL WG++G+D+V+E TG F RE A KH++AGAKKV+I
Sbjct: 59 VNGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVII 118
Query: 189 TAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
+AP K + T V+GVN D Y P +ISNAS TTNCLAPF KVL ++FGI++G MTT H
Sbjct: 119 SAPAKNEDITIVMGVNQDKYDPKAHHVISNASATTNCLAPFAKVLHEQFGIVRGMMTTVH 178
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYT DQ +I+PT+T NG+A+RVPTPN
Sbjct: 179 SYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K+ EEVNAA + +A+ ELKGIL+ +EPLVS D+
Sbjct: 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALST 298
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
+ MVKV++WYDNE GYS RVVDLA +A+
Sbjct: 299 MVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 331
>pdb|1NQ5|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQO|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
Length = 334
Score = 289 bits (740), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/333 (45%), Positives = 198/333 (59%), Gaps = 4/333 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGRN R K+ +EVVA+ND +HLLKYDS G +A+V
Sbjct: 2 VKVGINGFGRIGRNVFRA--ALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVS- 58
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + + V+GK I V + R+P NL WG++G+D+V+E TG F RE A KH++AGAKKV+I
Sbjct: 59 VNGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVII 118
Query: 189 TAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
+AP K + T V+GVN D Y P +ISNAS TTNCLAPF KVL ++FGI++G MTT H
Sbjct: 119 SAPAKNEDITIVMGVNQDKYDPKAHHVISNASSTTNCLAPFAKVLHEQFGIVRGMMTTVH 178
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYT DQ +I+PT+T NG+A+RVPTPN
Sbjct: 179 SYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K+ EEVNAA + +A+ ELKGIL+ +EPLVS D+
Sbjct: 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALST 298
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
+ MVKV++WYDNE GYS RVVDLA +A+
Sbjct: 299 MVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 331
>pdb|1HDG|O Chain O, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
pdb|1HDG|Q Chain Q, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
Length = 332
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 191/329 (58%), Gaps = 1/329 (0%)
Query: 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPV 129
+VAINGFGRIGR R + RK+ +EVVAIND K +HLLKYDS F V+
Sbjct: 2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVE-Y 60
Query: 130 GTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189
+ + VDGK I+V + +P LPW DLG+D VIE TGVF +RE A H+QAGAKKV+IT
Sbjct: 61 TENSLIVDGKEIKVFAEPDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIIT 120
Query: 190 APGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSY 249
AP KG+ T V+G N D KP+ IIS ASCTTN +AP VKVL +KFGI+ G +TT HSY
Sbjct: 121 APAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAPIVKVLHEKFGIVSGMLTTVHSY 180
Query: 250 TGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXX 309
T DQ NI+PT+T +G+A+RVPTP+
Sbjct: 181 TNDQRVLDLPHKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDGSI 240
Query: 310 XXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXX 369
K+T EEVNA +E+ + LKGI+ DEP+VS D
Sbjct: 241 TDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNV 300
Query: 370 MGDDMVKVIAWYDNEWGYSQRVVDLADIV 398
+G +VKV +WYDNE+GYS RVVD +++
Sbjct: 301 IGGKLVKVASWYDNEYGYSNRVVDTLELL 329
>pdb|2EP7|A Chain A, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
pdb|2EP7|B Chain B, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
Length = 342
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 195/340 (57%), Gaps = 13/340 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGR+F R GR++ +E+VAIND K +HLLKYDS GIF+ V+
Sbjct: 3 IKVGINGFGRIGRSFFRASWGREE--IEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVE- 59
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
D I VDGK I+V + ++P +PWGDLG+D+VIE TGVF DRE A KH+Q GAKKV+I
Sbjct: 60 AKDDSIVVDGKEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVII 119
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEP-IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
TAP K T V+GVN + Y P E IISNASCTTNCLAP VKVL++ FG+ KG M T H
Sbjct: 120 TAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVH 179
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
+YT DQ NIVPT+T +G A RVP P+
Sbjct: 180 AYTNDQRLLDLPHKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPDG 239
Query: 308 XXXXXXXXXSKK-TFAEEVNAAFRESADN-------ELKGILSVCDEPLVSVDFRCXXXX 359
+K + EEVN FRE+A LK IL C++P+VS D
Sbjct: 240 SLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDI-VGNPH 298
Query: 360 XXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 399
+ D++V + AWYDNEWGYS R+ DL +A
Sbjct: 299 SAIFDAPLTQVIDNLVHIAAWYDNEWGYSCRLRDLVIYLA 338
>pdb|4DIB|A Chain A, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|B Chain B, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|C Chain C, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|D Chain D, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|E Chain E, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|F Chain F, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|G Chain G, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|H Chain H, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
Length = 345
Score = 271 bits (694), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/327 (44%), Positives = 191/327 (58%), Gaps = 4/327 (1%)
Query: 65 AQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEA 124
+ A +VAINGFGRIGR R K+S E+VAIN + + +HL+KYD+ G F+
Sbjct: 1 SNAMTRVAINGFGRIGRMVFR--QAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDG 58
Query: 125 DVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAK 184
V+ D + VDGK+I++++NR+P LPW DLG+++VIE TG F +E A H++AGAK
Sbjct: 59 TVEAF-EDHLLVDGKMIRLLNNRDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAK 117
Query: 185 KVLITAPGKGDIPTYVVGVNADAYK-PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTM 243
KV++TAPGK + T VVGVN D +ISNASCTTNCLAP VKVLD++FGI G M
Sbjct: 118 KVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAPVVKVLDEQFGIENGLM 177
Query: 244 TTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVP 303
TT H+YT DQ +I+PT+T +G+ALRVP
Sbjct: 178 TTVHAYTNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVP 237
Query: 304 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXX 363
TPN + E +N AF+ A+ LKGI+ +EPLVS+DF
Sbjct: 238 TPNVSLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIID 297
Query: 364 XXXXXXMGDDMVKVIAWYDNEWGYSQR 390
MGD VKV+AWYDNEWGYS+R
Sbjct: 298 GLSTMVMGDRKVKVLAWYDNEWGYSRR 324
>pdb|3DOC|A Chain A, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|B Chain B, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|C Chain C, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|D Chain D, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
Length = 335
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 187/329 (56%), Gaps = 5/329 (1%)
Query: 69 LKVAINGFGRIGRNFLRCW--HGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADV 126
++VAINGFGRIGRN LR GR D ++VVAIND G V+ +HLL+YDS G F +V
Sbjct: 3 VRVAINGFGRIGRNILRAIVESGRTD--IQVVAINDLGPVETNAHLLRYDSVHGRFPKEV 60
Query: 127 KPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186
+ G D I V I+V + RNP LPW + +D+ +E TG+F R+ A H++AGAK+V
Sbjct: 61 EVAG-DTIDVGYGPIKVHAVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRV 119
Query: 187 LITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 246
+++AP G T V GVN D D +ISNASCTTNCLAP +VL+ GI KG MTT
Sbjct: 120 IVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLAPVAQVLNDTIGIEKGFMTTI 179
Query: 247 HSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
HSYTGDQ +++PTST +G+A+RVPTPN
Sbjct: 180 HSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPTPN 239
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
++T EEVN A RE+A+ LKGIL DE LVS DF
Sbjct: 240 VSVVDLTFIAKRETTVEEVNNAIREAANGRLKGILGYTDEKLVSHDFNHDSHSSVFHTDQ 299
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDLA 395
M MV++++WYDNEWG+S R+ D A
Sbjct: 300 TKVMDGTMVRILSWYDNEWGFSSRMSDTA 328
>pdb|3GNQ|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|E Chain E, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|F Chain F, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|G Chain G, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|H Chain H, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
Length = 344
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 191/334 (57%), Gaps = 4/334 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGR-KDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVK 127
++VAING+GRIGRN LR ++ K LE+VAIND G K +HL +YD+ G F +V
Sbjct: 11 IRVAINGYGRIGRNTLRAFYENGKKHDLEIVAINDLGDAKTNAHLTQYDTAHGKFPGEVS 70
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
V D + V+G I+V++NRNP LPWG+LG+D+V+E TG F +E A H++ GAKKV+
Sbjct: 71 -VDGDYLVVNGDRIRVLANRNPAELPWGELGVDVVMECTGFFTSKEKASAHLKGGAKKVI 129
Query: 188 ITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 246
I+APG D+ T V GVN D K + +ISNASCTTNCLAP VK L+ K G+ G MTT
Sbjct: 130 ISAPGGKDVDATIVYGVNHDVLKAEHTVISNASCTTNCLAPLVKPLNDKIGLETGLMTTI 189
Query: 247 HSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
H+YT DQ + +PT T +G A+RVPT N
Sbjct: 190 HAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTIN 249
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
+ T A EVNA +E+++ LKGIL + PLVS+DF
Sbjct: 250 VSIVDLSFIAKRDTTAAEVNAIMKEASEGALKGILGYNEAPLVSIDFNHNPASSTFDATL 309
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
G +VKV +WYDNEWG+S R++D A +AN
Sbjct: 310 TKVSG-RLVKVSSWYDNEWGFSNRMLDTAIALAN 342
>pdb|3L0D|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
pdb|3L0D|B Chain B, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
Length = 356
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 182/329 (55%), Gaps = 5/329 (1%)
Query: 69 LKVAINGFGRIGRNFLRCW--HGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADV 126
++VAINGFGRIGRN LR GR+D +EVVA+ND G V+ +HLL+YDS G F V
Sbjct: 24 VRVAINGFGRIGRNILRAIIESGRQD--IEVVALNDLGSVETNAHLLRYDSVHGCFPGTV 81
Query: 127 KPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186
+ VG D I + +I+V + R+P LPW L ID+ +E TG+F R+ A H+ AGAK+V
Sbjct: 82 QVVG-DAIDIGSSLIKVFAERDPAQLPWKALDIDIALECTGIFTARDKASAHLDAGAKRV 140
Query: 187 LITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 246
L++AP +G T V GVN + +ISNASCTTNCLAP +VL GI KG MTT
Sbjct: 141 LVSAPSEGADLTVVYGVNHQFLSKEHHVISNASCTTNCLAPVAQVLHNTVGIEKGFMTTI 200
Query: 247 HSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
HSYTGDQ +++PTST +G+++RVPTPN
Sbjct: 201 HSYTGDQPVLDTMHRDLYRARAAALSMIPTSTGAAKAVGLVLPELKGLLDGVSIRVPTPN 260
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
+ T EE+N A R +A LKGIL DE LVS DF
Sbjct: 261 VSVVDLTFTAKRSTTIEEINTAIRTAAQGSLKGILDYTDEKLVSCDFNHNPHSAIFHNDQ 320
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDLA 395
+ + +V+ WYDNEWG+S R+ D A
Sbjct: 321 TKVIDGQLCRVLVWYDNEWGFSNRMCDTA 349
>pdb|3HJA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
Length = 356
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 188/335 (56%), Gaps = 13/335 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+K+AINGFGRIGRN + R +++VAIND K +HLLKYDST G++ V+
Sbjct: 22 MKLAINGFGRIGRNVFKIAFERG---IDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVE- 77
Query: 129 VGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFV----DREGAGKHI-QAG 182
DG I VDG+ I++++ R+P NLPW LGID+VIE TGVF D+ G H+ AG
Sbjct: 78 -SRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAG 136
Query: 183 AKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGT 242
AKKV++T P K +I T V+GVN D +SNASCTTNCLAP KVL + FGI +G
Sbjct: 137 AKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGL 196
Query: 243 MTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRV 302
MTT H+YT DQ +I+PTST NG ++RV
Sbjct: 197 MTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRV 256
Query: 303 PTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCXXXXX 360
P P KK EE+N+ R++++ ELKGIL ++P+VS D +
Sbjct: 257 PVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSS 316
Query: 361 XXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 395
+ + K+++WYDNE+GYS RVVDLA
Sbjct: 317 IVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLA 351
>pdb|1OBF|O Chain O, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution.
pdb|1OBF|P Chain P, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution
Length = 335
Score = 248 bits (633), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 182/327 (55%), Gaps = 4/327 (1%)
Query: 69 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVK 127
++VAING+GRIGRN LR + G K +E+VAIND G K +HL +YD+ G F V
Sbjct: 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVS 61
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
G+ + V+G I+V +NRNP LPWG L +D+V+E TG F +E AG HI+ GAKKV+
Sbjct: 62 VNGSYMV-VNGDKIRVDANRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVI 120
Query: 188 ITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 246
I+APG D+ T V GVN K + +ISNAS TTNCLAP VK L+ K G+ G MTT
Sbjct: 121 ISAPGGADVDATVVYGVNHGTLKSTDTVISNASXTTNCLAPLVKPLNDKLGLQDGLMTTV 180
Query: 247 HSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
H+YT +Q +++PT T NG A+RVPT N
Sbjct: 181 HAYTNNQVLTDVYHEDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPTIN 240
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
+ T EEVN + +++ ELKGIL EPLVSVD+
Sbjct: 241 VSIVDLSFVAKRNTTVEEVNGILKAASEGELKGILDYNTEPLVSVDYNHDPASSTVDASL 300
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVD 393
G +VKV +WYDNEWG+S R++D
Sbjct: 301 TKVSG-RLVKVSSWYDNEWGFSNRMLD 326
>pdb|1CER|O Chain O, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|P Chain P, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|Q Chain Q, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|R Chain R, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|A Chain A, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|B Chain B, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|C Chain C, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|D Chain D, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
Length = 331
Score = 247 bits (631), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 183/331 (55%), Gaps = 6/331 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGR R H R +EV IND K +HLLKYDS F +V
Sbjct: 1 MKVGINGFGRIGRQVFRILHSRG---VEVALINDLTDNKTLAHLLKYDSIYHRFPGEV-A 56
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
+ VDGK I+ + ++P +PW + G+ +VIE TGVF D + A H++ GAKKV+I
Sbjct: 57 YDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVII 116
Query: 189 TAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
TAP KG+ T V+GVN +AY P IISNASCTTN LAP +KVL++ FG+ K MTT H
Sbjct: 117 TAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVMKVLEEAFGVEKALMTTVH 176
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYT DQ NI+PT+T +G+ALRVPT
Sbjct: 177 SYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATG 236
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
++ AEEVNAA + +A+ LKGIL+ ++ +V D
Sbjct: 237 SISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLT 296
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 398
+G +MVKV AWYDNEWGY+ RV DL ++V
Sbjct: 297 KALG-NMVKVFAWYDNEWGYANRVADLVELV 326
>pdb|1VC2|A Chain A, Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Thermus Thermophilus Hb8
Length = 331
Score = 247 bits (630), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 185/333 (55%), Gaps = 10/333 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGR R H R +EV IND K +HLLKYDST G F
Sbjct: 1 MKVGINGFGRIGRQVFRILHERG---VEVALINDLTDNKTLAHLLKYDSTYGRFPG---A 54
Query: 129 VGTD--GISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186
VG D + VDGK I+ + ++P +PW G+ +V+E TGVF D E A H++AGAKKV
Sbjct: 55 VGYDEENLYVDGKAIRATAIKDPREIPWKQAGVGVVVESTGVFTDGEKARAHLEAGAKKV 114
Query: 187 LITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 245
+ITAP K + T V+GVN + Y P I+SNASCTTN LAP +KVL++ FG+ K MTT
Sbjct: 115 IITAPAKNEDITVVLGVNHEQYDPAKHHILSNASCTTNSLAPVMKVLEKAFGVEKALMTT 174
Query: 246 THSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTP 305
HSYT DQ NI+PT+T +G+ALRVPTP
Sbjct: 175 VHSYTNDQRLLDLPHKDLRRARAAALNIIPTTTGAAKATALVLPSLKGRFDGMALRVPTP 234
Query: 306 NXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
++ AEEVNAA + +A+ LKGIL+ ++ +V D
Sbjct: 235 TGSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLRDIVMDPHSSIVDGK 294
Query: 366 XXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 398
+G ++VKV AWYDNEWGY+ RV DL ++V
Sbjct: 295 LTKAIG-NLVKVFAWYDNEWGYANRVADLVELV 326
>pdb|2G82|O Chain O, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|P Chain P, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|Q Chain Q, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|R Chain R, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|A Chain A, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|B Chain B, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|C Chain C, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|D Chain D, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
Length = 331
Score = 243 bits (621), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 182/331 (54%), Gaps = 6/331 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGR R H R +EV IND K +HLLKYDS F +V
Sbjct: 1 MKVGINGFGRIGRQVFRILHSRG---VEVALINDLTDNKTLAHLLKYDSIYHRFPGEV-A 56
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
+ VDGK I+ + ++P +PW + G+ +VIE TGVF D + A H++ GAKKV+I
Sbjct: 57 YDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVII 116
Query: 189 TAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
TAP KG+ T V+GVN +AY P IISNAS TTN LAP +KVL++ FG+ K MTT H
Sbjct: 117 TAPAKGEDITIVMGVNHEAYDPSRHHIISNASXTTNSLAPVMKVLEEAFGVEKALMTTVH 176
Query: 248 SYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
SYT DQ NI+PT+T +G+ALRVPT
Sbjct: 177 SYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATG 236
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
++ AEEVNAA + +A+ LKGIL+ ++ +V D
Sbjct: 237 SISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLT 296
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 398
+G +MVKV AWYDNEWGY+ RV DL ++V
Sbjct: 297 KALG-NMVKVFAWYDNEWGYANRVADLVELV 326
>pdb|1GAD|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAD|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1DC3|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC3|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC5|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC5|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC6|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes.
pdb|1DC6|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
Length = 330
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 182/327 (55%), Gaps = 5/327 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGR R R D +E+VAIND +++LKYDST G F+ V+
Sbjct: 2 IKVGINGFGRIGRIVFRAAQKRSD--IEIVAINDLLDADYMAYMLKYDSTHGRFDGTVE- 58
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + V+GK I+V + R+P NL W ++G+D+V E TG+F+ E A KHI AGAKKV++
Sbjct: 59 VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVM 118
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
T P K + P +V G N D Y + I+SNASCTTNCLAP KV++ FGII+G MTT H+
Sbjct: 119 TGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHA 177
Query: 249 YTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
T Q NI+P+ST G+A RVPTPN
Sbjct: 178 TTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 237
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K E++ AA + +A+ E+KG+L ++ +VS DF
Sbjct: 238 SVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAG 297
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D+ VK+++WYDNE GYS +V+DL
Sbjct: 298 IALNDNFVKLVSWYDNETGYSNKVLDL 324
>pdb|1S7C|A Chain A, Crystal Structure Of Mes Buffer Bound Form Of
Glyceraldehyde 3- Phosphate Dehydrogenase From
Escherichia Coli
Length = 331
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 182/327 (55%), Gaps = 5/327 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGR R R D +E+VAIND +++LKYDST G F+ V+
Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSD--IEIVAINDLLDADYMAYMLKYDSTHGRFDGTVE- 59
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + V+GK I+V + R+P NL W ++G+D+V E TG+F+ E A KHI AGAKKV++
Sbjct: 60 VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVM 119
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
T P K + P +V G N D Y + I+SNASCTTNCLAP KV++ FGII+G MTT H+
Sbjct: 120 TGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHA 178
Query: 249 YTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
T Q NI+P+ST G+A RVPTPN
Sbjct: 179 TTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 238
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K E++ AA + +A+ E+KG+L ++ +VS DF
Sbjct: 239 SVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAG 298
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D+ VK+++WYDNE GYS +V+DL
Sbjct: 299 IALNDNFVKLVSWYDNETGYSNKVLDL 325
>pdb|1GAE|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAE|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
Length = 330
Score = 237 bits (605), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 181/327 (55%), Gaps = 5/327 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGR R R D +E+VAIND +++LKYDST G F+ V+
Sbjct: 2 IKVGINGFGRIGRIVFRAAQKRSD--IEIVAINDLLDADYMAYMLKYDSTHGRFDGTVE- 58
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + V+GK I+V + R+P NL W ++G+D+V E TG+F+ E A KHI AGAKKV++
Sbjct: 59 VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVM 118
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
T P K + P +V G N D Y + I+SNASCTTNCLAP KV++ FGII+G MTT H+
Sbjct: 119 TGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHA 177
Query: 249 YTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
T Q NI+P+ST G+A RVPTPN
Sbjct: 178 TTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 237
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K E++ AA + +A+ E+KG+L ++ +VS DF
Sbjct: 238 SVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAG 297
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D+ VK+++WYD E GYS +V+DL
Sbjct: 298 IALNDNFVKLVSWYDTETGYSNKVLDL 324
>pdb|2VYN|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 331
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 182/327 (55%), Gaps = 5/327 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGR R R D +E+VAIND +++LKYDST G F+ V+
Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSD--IEIVAINDLLDADYMAYMLKYDSTHGRFDGTVE- 59
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + V+GK I+V + R+P NL W ++G+D+V E TG+F+ E A KHI AGAKKV++
Sbjct: 60 VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVM 119
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
T P K + P +V G N D Y + I+SNAS TTNCLAP KV++ FGII+G MTT H+
Sbjct: 120 TGPSKDNTPMFVKGANFDKY-AGQDIVSNASXTTNCLAPLAKVINDNFGIIEGLMTTVHA 178
Query: 249 YTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
T Q NI+P+ST G+A RVPTPN
Sbjct: 179 TTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 238
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K E++ AA + +A+ E+KG+L ++ +VS DF
Sbjct: 239 SVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVXTSVFDAKAG 298
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D+ VK+++WYDNE GYS +V+DL
Sbjct: 299 IALNDNFVKLVSWYDNETGYSNKVLDL 325
>pdb|3CPS|A Chain A, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|3CPS|B Chain B, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 354
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 57 SSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKY 115
SSG + Q L INGFGRIGR LR R D + VVAIND V+ ++LLKY
Sbjct: 8 SSGRENLYFQGTL--GINGFGRIGRLVLRACMERND--ITVVAINDPFMDVEYMAYLLKY 63
Query: 116 DSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGA 175
DS G F V+ G D + ++GKV++V ++P +PWG G +V E TGVF E A
Sbjct: 64 DSVHGNFNGTVEVSGKD-LCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKA 122
Query: 176 GKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVLDQ 234
H++ GAKKV+I+AP K ++P YV+GVN Y P + +ISNASCTTNCLAP K+++
Sbjct: 123 SLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIIND 182
Query: 235 KFGIIKGTMTTTHSYTGDQXXXXXXXXXXX---XXXXXXXNIVPTSTXXXXXXXXXXXXX 291
KFGI++G MTT HS T +Q NI+P ST
Sbjct: 183 KFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPAL 242
Query: 292 XXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSV 351
G+A+RVPTP+ +K EE+ A +E+++ +KGI+ + +VS
Sbjct: 243 NGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVST 302
Query: 352 DFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
DF + D VK+I+WYDNE GYS R+VDLA VA+
Sbjct: 303 DFIGCKYSSIFDKNACIALNDSFVKLISWYDNESGYSNRLVDLAVYVAS 351
>pdb|1VSU|A Chain A, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|B Chain B, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|C Chain C, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|D Chain D, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|A Chain A, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|B Chain B, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|C Chain C, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|D Chain D, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 234 bits (597), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 184/335 (54%), Gaps = 8/335 (2%)
Query: 71 VAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEADVKPV 129
+ INGFGRIGR LR R D + VVAIND V+ ++LLKYDS G F V+
Sbjct: 25 LGINGFGRIGRLVLRACMERND--ITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVS 82
Query: 130 GTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189
G D + ++GKV++V ++P +PWG G +V E TGVF E A H++ GAKKV+I+
Sbjct: 83 GKD-LCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIIS 141
Query: 190 APGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
AP K ++P YV+GVN Y P + +ISNASCTTNCLAP K+++ KFGI++G MTT HS
Sbjct: 142 APPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHS 201
Query: 249 YTGDQXXXXXXXXXXX---XXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTP 305
T +Q NI+P ST G+A+RVPTP
Sbjct: 202 LTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTP 261
Query: 306 NXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
+ +K EE+ A +E+++ +KGI+ + +VS DF
Sbjct: 262 DVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKN 321
Query: 366 XXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
+ D VK+I+WYDNE GYS R+VDLA VA+
Sbjct: 322 ACIALNDSFVKLISWYDNESGYSNRLVDLAVYVAS 356
>pdb|1YWG|O Chain O, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|P Chain P, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|Q Chain Q, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|R Chain R, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
Length = 337
Score = 231 bits (588), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 180/341 (52%), Gaps = 9/341 (2%)
Query: 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEA 124
A K+ INGFGRIGR R GRKD +EVVAIND + +LLKYDS G F
Sbjct: 1 MAVTKLGINGFGRIGRLVFRAAFGRKD--IEVVAINDPFMDLNHLCYLLKYDSVHGQFPC 58
Query: 125 DVKPVGTDGISVDG-KVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGA 183
+V DG + G K + V + ++P +PWG +D+V E TGVF+ +E A H++ GA
Sbjct: 59 EV--THADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGA 116
Query: 184 KKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTM 243
KKV+++AP K D P YV+G+N Y + I+SNASCTTNCLAP KV++ +FGI++G M
Sbjct: 117 KKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLM 176
Query: 244 TTTHSYTGDQXXXXXXXXXXX---XXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIAL 300
TT H+ T +Q NI+P ST G+A
Sbjct: 177 TTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAF 236
Query: 301 RVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXX 360
RVP K EEV +++A+ LKGIL ++ +VS DF
Sbjct: 237 RVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSS 296
Query: 361 XXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 401
+ D+ K+++WYDNEWGYS RV+DLA + NN
Sbjct: 297 IFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITNN 337
>pdb|3CIF|A Chain A, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|B Chain B, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|C Chain C, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|D Chain D, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/335 (40%), Positives = 183/335 (54%), Gaps = 8/335 (2%)
Query: 71 VAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEADVKPV 129
+ INGFGRIGR LR R D + VVAIND V+ ++LLKYDS G F V+
Sbjct: 25 LGINGFGRIGRLVLRACMERND--ITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVS 82
Query: 130 GTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189
G D + ++GKV++V ++P +PWG G +V E TGVF E A H++ GAKKV+I+
Sbjct: 83 GKD-LCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIIS 141
Query: 190 APGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
AP K ++P YV+GVN Y P + +ISNAS TTNCLAP K+++ KFGI++G MTT HS
Sbjct: 142 APPKDNVPMYVMGVNNTEYDPSKFNVISNASSTTNCLAPLAKIINDKFGIVEGLMTTVHS 201
Query: 249 YTGDQXXXXXXXXXXX---XXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTP 305
T +Q NI+P ST G+A+RVPTP
Sbjct: 202 LTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTP 261
Query: 306 NXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
+ +K EE+ A +E+++ +KGI+ + +VS DF
Sbjct: 262 DVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSILDKN 321
Query: 366 XXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
+ D VK+I+WYDNE GYS R+VDLA VA+
Sbjct: 322 ACIALNDSFVKLISWYDNESGYSNRLVDLAVYVAS 356
>pdb|2I5P|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
pdb|2I5P|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
Length = 342
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 187/333 (56%), Gaps = 7/333 (2%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVK 127
+ +AINGFGRIGR LR RK+ ++VVAIND V A+++ KYDST G ++ +V
Sbjct: 15 VSIAINGFGRIGRLVLRIALERKN--IDVVAINDPFISVDYAAYMFKYDSTHGKYKGEVS 72
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
G++ I ++GK + V ++P LPWG LG+D+ ++ TGVF + + A KHI AGAKKV+
Sbjct: 73 HDGSNLI-INGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVV 131
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
ITAP K P +VVGVN D Y E I+SNASCTTNCLAP K+++ +FGI +G MTT H
Sbjct: 132 ITAPSK-TAPMFVVGVNEDKYN-GEKIVSNASCTTNCLAPIAKIINDEFGIEEGLMTTVH 189
Query: 248 SYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
S T Q NI+P+ST G+A RVPT +
Sbjct: 190 SITATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTTD 249
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
K +E+ AA ++ ++ +LK ++ ++ +VS DF
Sbjct: 250 VSVVDLTVKLVKAATYDEIKAAVKKVSEGKLKDVVGYTEDAVVSSDFLGDTHSTIFDAAA 309
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 399
+ VK++AWYDNE+GYS RVVDL + VA
Sbjct: 310 GIQLSPKFVKLVAWYDNEYGYSTRVVDLVEHVA 342
>pdb|2B4R|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
Length = 345
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 176/331 (53%), Gaps = 9/331 (2%)
Query: 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEADVKP 128
K+ INGFGRIGR R GRKD +EVVAIND + +LLKYDS G F +V
Sbjct: 13 KLGINGFGRIGRLVFRAAFGRKD--IEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEV-- 68
Query: 129 VGTDGISVDG-KVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
DG + G K + V + ++P +PWG +D+V E TGVF+ +E A H++ GAKKV+
Sbjct: 69 THADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVI 128
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
++AP K D P YV+G+N Y + I+SNASCTTNCLAP KV++ +FGI++G MTT H
Sbjct: 129 MSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVH 188
Query: 248 SYTGDQXXXXXXXXXXX---XXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPT 304
+ T +Q NI+P ST G+A RVP
Sbjct: 189 ASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPI 248
Query: 305 PNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXX 364
K EEV +++A+ LKGIL ++ +VS DF
Sbjct: 249 GTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDM 308
Query: 365 XXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 395
+ D+ K+++WYDNEWGYS RV+DLA
Sbjct: 309 KAGLALNDNFFKLVSWYDNEWGYSNRVLDLA 339
>pdb|4IQ8|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase 3 From Saccharomyces Cerevisiae
Length = 340
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/333 (39%), Positives = 180/333 (54%), Gaps = 6/333 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQ-ASHLLKYDSTLGIFEADVK 127
++VAINGFGRIGR +R R + +EVVA+ND A+++ KYDST G + +V
Sbjct: 10 VRVAINGFGRIGRLVMRIALSRPN--VEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVS 67
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
I VDGK I R+P NLPWG +D+ I+ TGVF + + A KHI AGAKKV+
Sbjct: 68 H-DDKHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVV 126
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
ITAP P +V+GVN + Y D I+SNASCTTNCLAP KV++ FGI +G MTT H
Sbjct: 127 ITAPS-STAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVH 185
Query: 248 SYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
S T Q NI+P+ST G+A RVPT +
Sbjct: 186 SLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVD 245
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
+K+T +E+ + +A+ +LKG+L ++ +VS DF
Sbjct: 246 VSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASA 305
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 399
+ VK+++WYDNE+GYS RVVDL + VA
Sbjct: 306 GIQLSPKFVKLVSWYDNEYGYSTRVVDLVEHVA 338
>pdb|3PYM|A Chain A, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
pdb|3PYM|B Chain B, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
Length = 332
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/333 (39%), Positives = 180/333 (54%), Gaps = 6/333 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQ-ASHLLKYDSTLGIFEADVK 127
++VAINGFGRIGR +R R + +EVVA+ND A+++ KYDST G + +V
Sbjct: 2 VRVAINGFGRIGRLVMRIALSRPN--VEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVS 59
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
I VDGK I R+P NLPWG +D+ I+ TGVF + + A KHI AGAKKV+
Sbjct: 60 H-DDKHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVV 118
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
ITAP P +V+GVN + Y D I+SNASCTTNCLAP KV++ FGI +G MTT H
Sbjct: 119 ITAPS-STAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVH 177
Query: 248 SYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
S T Q NI+P+ST G+A RVPT +
Sbjct: 178 SLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVD 237
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
+K+T +E+ + +A+ +LKG+L ++ +VS DF
Sbjct: 238 VSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASA 297
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 399
+ VK+++WYDNE+GYS RVVDL + VA
Sbjct: 298 GIQLSPKFVKLVSWYDNEYGYSTRVVDLVEHVA 330
>pdb|1SZJ|G Chain G, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1SZJ|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1CRW|G Chain G, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
pdb|1CRW|R Chain R, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
Length = 333
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 175/328 (53%), Gaps = 9/328 (2%)
Query: 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKP 128
K+ INGFGRIGR LR + +VVA+ND ++ ++ KYDST G+F+ +VK
Sbjct: 2 KIGINGFGRIGRLVLR---AALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVK- 57
Query: 129 VGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
DG + VDGK I V + P N+PW G + ++E TGVF E A H + GAKKV+
Sbjct: 58 -AEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVI 116
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
I+AP D P +V GVN + Y D ++SNASCTTNCLAP KVL + F I++G MTT H
Sbjct: 117 ISAPS-ADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVH 175
Query: 248 SYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
+ T Q NI+P+ST G+A RVPTPN
Sbjct: 176 AVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPN 235
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
K+ +++ AA + +++ L+G+L ++ +VS DF
Sbjct: 236 VSVVDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKA 295
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ VKV++WYDNE+GYSQRV+DL
Sbjct: 296 GIQLSKTFVKVVSWYDNEFGYSQRVIDL 323
>pdb|3E6A|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
Length = 336
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 177/330 (53%), Gaps = 6/330 (1%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFE-AD 125
K+K+ INGFGRIGR R +D +E+VA+ND +++ KYD+ G ++ +D
Sbjct: 2 KIKIGINGFGRIGRLVARVALQSED--VELVAVNDPFITTDYMTYMFKYDTVHGQWKHSD 59
Query: 126 VKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKK 185
+K + + + K + V RNP +PW + G + V+E TGVF D+E A H++ GAKK
Sbjct: 60 IKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKK 119
Query: 186 VLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 245
V+I+AP K D P +V GVN D Y D I+SNASCTTNCLAP KV+ FGII+G MTT
Sbjct: 120 VVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTT 178
Query: 246 THSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPT 304
H+ T Q NI+P+ST G++ RVPT
Sbjct: 179 VHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPT 238
Query: 305 PNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXX 364
+ K + + +A + +++ +LKGI+ +E LVS DF
Sbjct: 239 VDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDA 298
Query: 365 XXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D+ VK++AWYDNEWGYS RV+DL
Sbjct: 299 KAGIALNDNFVKLVAWYDNEWGYSNRVIDL 328
>pdb|3E5R|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3V1Y|O Chain O, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|A Chain A, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|B Chain B, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|C Chain C, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
Length = 337
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 177/330 (53%), Gaps = 6/330 (1%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFE-AD 125
K+K+ INGFGRIGR R +D +E+VA+ND +++ KYD+ G ++ +D
Sbjct: 3 KIKIGINGFGRIGRLVARVALQSED--VELVAVNDPFITTDYMTYMFKYDTVHGQWKHSD 60
Query: 126 VKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKK 185
+K + + + K + V RNP +PW + G + V+E TGVF D+E A H++ GAKK
Sbjct: 61 IKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKK 120
Query: 186 VLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 245
V+I+AP K D P +V GVN D Y D I+SNASCTTNCLAP KV+ FGII+G MTT
Sbjct: 121 VVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTT 179
Query: 246 THSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPT 304
H+ T Q NI+P+ST G++ RVPT
Sbjct: 180 VHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPT 239
Query: 305 PNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXX 364
+ K + + +A + +++ +LKGI+ +E LVS DF
Sbjct: 240 VDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDA 299
Query: 365 XXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D+ VK++AWYDNEWGYS RV+DL
Sbjct: 300 KAGIALNDNFVKLVAWYDNEWGYSNRVIDL 329
>pdb|1IHX|A Chain A, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|B Chain B, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|C Chain C, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|D Chain D, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHY|A Chain A, Gapdh Complexed With Adp-Ribose
pdb|1IHY|B Chain B, Gapdh Complexed With Adp-Ribose
pdb|1IHY|C Chain C, Gapdh Complexed With Adp-Ribose
pdb|1IHY|D Chain D, Gapdh Complexed With Adp-Ribose
Length = 333
Score = 221 bits (562), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 174/327 (53%), Gaps = 7/327 (2%)
Query: 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKP 128
K+ INGFGRIGR LR + +VVA+ND ++ ++ KYDST G+F+ +VK
Sbjct: 2 KIGINGFGRIGRLVLRT---ALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVK- 57
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + VDGK I V + P N+PW G + ++E TGVF E A H + GAKKV+I
Sbjct: 58 VEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVII 117
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
+AP D P +V GVN + Y D ++SNASCTTNCLAP KVL + F I++G MTT H+
Sbjct: 118 SAPS-ADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHA 176
Query: 249 YTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
T Q NI+P+ST G+A RVPTPN
Sbjct: 177 VTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNV 236
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K+ +++ AA + +++ L+G+L ++ +VS DF
Sbjct: 237 SVVDLTVRLGKECSYDDIKAAMKTASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAG 296
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ VKV++WYDNE+GYSQRV+DL
Sbjct: 297 IQLSKTFVKVVSWYDNEFGYSQRVIDL 323
>pdb|1DC4|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC4|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
Length = 330
Score = 220 bits (561), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 177/327 (54%), Gaps = 5/327 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KV INGFGRIGR R R D +E+VAIND ++ LKYDST G F+ V+
Sbjct: 2 IKVGINGFGRIGRIVFRAAQKRSD--IEIVAINDLLDADYXAYXLKYDSTHGRFDGTVE- 58
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V + V+GK I+V + R+P NL W ++G+D+V E TG+F+ E A KHI AGAKKV+
Sbjct: 59 VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVX 118
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
T P K + P +V G N D Y + I+SNASCTTNCLAP KV++ FGII+G TT H+
Sbjct: 119 TGPSKDNTPXFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLXTTVHA 177
Query: 249 YTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNX 307
T Q NI+P+ST G A RVPTPN
Sbjct: 178 TTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGXAFRVPTPNV 237
Query: 308 XXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXX 367
K E++ AA + +A+ E KG+L ++ +VS DF
Sbjct: 238 SVVDLTVRLEKAATYEQIKAAVKAAAEGEXKGVLGYTEDDVVSTDFNGEVCTSVFDAKAG 297
Query: 368 XXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D+ VK+++WYDNE GYS +V+DL
Sbjct: 298 IALNDNFVKLVSWYDNETGYSNKVLDL 324
>pdb|1DSS|G Chain G, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
pdb|1DSS|R Chain R, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
Length = 333
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 174/328 (53%), Gaps = 9/328 (2%)
Query: 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKP 128
K+ INGFGRIGR LR + +VVA+ND ++ ++ KYDST G+F+ +VK
Sbjct: 2 KIGINGFGRIGRLVLRA---ALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVK- 57
Query: 129 VGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
DG + VDGK I V + P N+PW G + ++E TGVF E A H + GAKKV+
Sbjct: 58 -AEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVI 116
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
I+AP D P +V GVN + Y D ++SNAS TTNCLAP KVL + F I++G MTT H
Sbjct: 117 ISAPS-ADAPMFVCGVNLEKYSKDMKVVSNASXTTNCLAPVAKVLHENFEIVEGLMTTVH 175
Query: 248 SYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
+ T Q NI+P+ST G+A RVPTPN
Sbjct: 176 AVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPN 235
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
K+ +++ AA + +++ L+G+L ++ +VS DF
Sbjct: 236 VSVVDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKA 295
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ VKV++WYDNE+GYSQRV+DL
Sbjct: 296 GIQLSKTFVKVVSWYDNEFGYSQRVIDL 323
>pdb|1K3T|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1ML3|A Chain A, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|B Chain B, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|C Chain C, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|D Chain D, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1QXS|C Chain C, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|D Chain D, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|A Chain A, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|B Chain B, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|3DMT|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3IDS|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
Length = 359
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 183/350 (52%), Gaps = 18/350 (5%)
Query: 69 LKVAINGFGRIGRNFLR--CWHGRKDSPLEVVAINDTGG-VKQASHLLKYDSTLGIFEAD 125
+KV INGFGRIGR + C G + ++VVA+ D + ++ ++YD+ G F+ +
Sbjct: 3 IKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYE 62
Query: 126 VKPVGT-------DGISVDG-KVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGK 177
V + D + V+G +++ V + RNP +LPWG LG++ VIE TG+F + A
Sbjct: 63 VTTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEG 122
Query: 178 HIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVL-DQK 235
H++ GA+KV+I+AP G T V+GVN Y P E ++SNASCTTNCLAP V VL +
Sbjct: 123 HLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASCTTNCLAPIVHVLVKEG 182
Query: 236 FGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXX 294
FG+ G MTT HSYT Q NI+P++T
Sbjct: 183 FGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQGK 242
Query: 295 XNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF- 353
G++ RVPTP+ ++ T +E++AA + ++ +KGIL DE LVS DF
Sbjct: 243 LTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSADFI 302
Query: 354 ---RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
R K+++WYDNEWGYS RVVDL +A+
Sbjct: 303 NDNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMAS 352
>pdb|2X5J|O Chain O, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|P Chain P, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|Q Chain Q, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|R Chain R, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 172/328 (52%), Gaps = 5/328 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWH--GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADV 126
++VAINGFGRIGRN +R + GR+ + + VVAIN+ +HLLKYD++ G F +V
Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRR-AEITVVAINELADAAGMAHLLKYDTSHGRFAWEV 61
Query: 127 KPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186
+ D + V I+V+ R+ +LPW +LG+D+V++ TGV+ RE HI AGAKKV
Sbjct: 62 RQ-ERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKV 120
Query: 187 LITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 245
L + PG D+ T V GVN D + + I+SNASCTTNC+ P +K+LD +GI GT+TT
Sbjct: 121 LFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTT 180
Query: 246 THSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTP 305
HS DQ +I+P T IA+RVPT
Sbjct: 181 IHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTI 240
Query: 306 NXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
N K A EVN +++A GI+ + PLVSVDF
Sbjct: 241 NVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGT 300
Query: 366 XXXXMGDDMVKVIAWYDNEWGYSQRVVD 393
G ++K + W DNEWG++ R++D
Sbjct: 301 QTRVSGAHLIKTLVWCDNEWGFANRMLD 328
>pdb|3STH|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
Length = 361
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 181/336 (53%), Gaps = 10/336 (2%)
Query: 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEADVKP 128
K+ INGFGRIGR R R D +EV+AIND + +LL+YDS G + +V
Sbjct: 25 KLGINGFGRIGRLVFRAAMERGD--VEVLAINDPFMSLDYMVYLLRYDSVHGHYPGEVSH 82
Query: 129 VGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
DG + V GK + V + + P +PWG G+ + E TG+F+ +E A H+ GAKKV+
Sbjct: 83 --KDGKLIVGGKAVTVFNEKEPTAIPWGQAGVHYICESTGIFLTKEKAQAHLTNGAKKVI 140
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
++AP K D P +V+GVN D YK + I+SNASCTTNCLAP K++ KFGI++G MTT H
Sbjct: 141 MSAPPKDDTPMFVMGVNNDQYKSSDVIVSNASCTTNCLAPLAKIVHDKFGIVEGLMTTVH 200
Query: 248 SYTGDQXXXXXXXXXXX---XXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPT 304
+ T +Q NI+P ST G+A RVP
Sbjct: 201 AMTANQLTVDGPSKGGKDWRAGRSAGVNIIPASTGAAKAVGKIIPSLNGKLTGMAFRVPV 260
Query: 305 PNXXXXXXXXXXSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCXXXXXXXX 363
P+ +K E++ AA +E+A + +KGI+S DE +VS DF
Sbjct: 261 PDVSVVDLTCKLAKPAKYEDIVAAVKEAATSGPMKGIISYTDEEVVSSDFVHCKFSSVFD 320
Query: 364 XXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 399
+ D VK+++WYDNEWGYS R+V+LA ++
Sbjct: 321 INAGIMLNDTFVKLVSWYDNEWGYSNRLVELAHYMS 356
>pdb|2XF8|A Chain A, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|B Chain B, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|C Chain C, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|D Chain D, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|E Chain E, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|F Chain F, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|G Chain G, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|H Chain H, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|I Chain I, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|J Chain J, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|K Chain K, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|L Chain L, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|M Chain M, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|N Chain N, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|O Chain O, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|P Chain P, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
Length = 338
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 172/328 (52%), Gaps = 5/328 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWH--GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADV 126
++VAINGFGRIGRN +R + GR+ + + VVAIN+ +HLLKYD++ G F +V
Sbjct: 2 VRVAINGFGRIGRNVVRALYESGRR-AEITVVAINELADAAGMAHLLKYDTSHGRFAWEV 60
Query: 127 KPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186
+ D + V I+V+ R+ +LPW +LG+D+V++ TGV+ RE HI AGAKKV
Sbjct: 61 RQ-ERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKV 119
Query: 187 LITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 245
L + PG D+ T V GVN D + + I+SNASCTTNC+ P +K+LD +GI GT+TT
Sbjct: 120 LFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTT 179
Query: 246 THSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTP 305
HS DQ +I+P T IA+RVPT
Sbjct: 180 IHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTI 239
Query: 306 NXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
N K A EVN +++A GI+ + PLVSVDF
Sbjct: 240 NVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGT 299
Query: 366 XXXXMGDDMVKVIAWYDNEWGYSQRVVD 393
G ++K + W DNEWG++ R++D
Sbjct: 300 QTRVSGAHLIKTLVWCDNEWGFANRMLD 327
>pdb|1GPD|G Chain G, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|1GPD|R Chain R, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 334
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 173/328 (52%), Gaps = 9/328 (2%)
Query: 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKP 128
K+ INGFGRIGR LR +VVA+ND ++ ++ KYDST G+F+ +VK
Sbjct: 3 KIGINGFGRIGRLVLR---AALSCGAQVVAVNDPFIALEYMVYMFKYDSTHGVFKGEVKM 59
Query: 129 VGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
DG + VDGK I V + P N+PW G + ++E TGVF E A H + GAKKV+
Sbjct: 60 --EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVV 117
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
I+AP D P +V GVN + Y D ++SNASCTTNCLAP KVL + F I++G MTT H
Sbjct: 118 ISAPS-ADAPMFVCGVNLEKYSKDMTVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVH 176
Query: 248 SYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
+ T Q NI+P+ST G+A RVPTP+
Sbjct: 177 AVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPD 236
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
K+ +++ AA + +++ L+G L ++ +VS DF
Sbjct: 237 VSVVDLTVRLGKECSYDDIKAAMKTASEGPLQGFLGYTEDDVVSSDFIGDNRSSIFDAKA 296
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ VKV++WYDNE+GYSQRV+DL
Sbjct: 297 GIQLSKTFVKVVSWYDNEFGYSQRVIDL 324
>pdb|4GPD|1 Chain 1, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|2 Chain 2, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|3 Chain 3, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|4 Chain 4, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
Length = 333
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 173/328 (52%), Gaps = 9/328 (2%)
Query: 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKP 128
K+ INGFGRIGR LR +VVA+ND ++ ++ KYDST G+F+ +VK
Sbjct: 2 KIGINGFGRIGRLVLR---AALSCGAQVVAVNDPFIALEYMVYMFKYDSTHGVFKGEVKM 58
Query: 129 VGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
DG + VDGK I V + P N+PW G + ++E TGVF E A H + GAKKV+
Sbjct: 59 --EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVV 116
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
I+AP D P +V GVN + Y D ++SNASCTTNCLAP KVL + F I++G MTT H
Sbjct: 117 ISAPS-ADAPMFVCGVNLEKYSKDMTVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVH 175
Query: 248 SYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
+ T Q NI+P+ST G+A RVPTP+
Sbjct: 176 AVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPD 235
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
K+ +++ AA + +++ L+G L ++ +VS DF
Sbjct: 236 VSVVDLTVRLGKECSYDDIKAAMKTASEGPLQGFLGYTEDDVVSSDFIGDNRSSIFDAKA 295
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ VKV++WYDNE+GYSQRV+DL
Sbjct: 296 GIQLSKTFVKVVSWYDNEFGYSQRVIDL 323
>pdb|1GYP|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYQ|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
Length = 358
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/351 (37%), Positives = 183/351 (52%), Gaps = 18/351 (5%)
Query: 67 AKLKVAINGFGRIGRNFLR--CWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFE 123
A +KV INGFGRIGR + C G + ++VVA+ D + + ++ +K+D+ G +
Sbjct: 1 APIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPK 60
Query: 124 ADVKPVGT-------DGISVDGKVIQVV-SNRNPVNLPWGDLGIDLVIEGTGVFVDREGA 175
V+ V + D + V+G I+ V + RNP +LPWG LG+D VIE TG+F D+ A
Sbjct: 61 YTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKA 120
Query: 176 GKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKVLDQ 234
HI+ GAKKV+I+AP G T V+GVN Y P ++SNASCTTNCLAP V VL +
Sbjct: 121 EGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTK 180
Query: 235 K-FGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXX 292
+ FGI G MTT HSYT Q NI+P++T
Sbjct: 181 ENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTK 240
Query: 293 XXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 352
G++ RVPTP+ ++ T +E++ A +++A +KGIL DE LVS D
Sbjct: 241 GKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSAD 300
Query: 353 F----RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 399
F R KV++WYDNEW YS RVVDL +A
Sbjct: 301 FINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMA 351
>pdb|1A7K|A Chain A, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|B Chain B, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|C Chain C, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|D Chain D, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1I32|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
Length = 360
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/351 (37%), Positives = 183/351 (52%), Gaps = 18/351 (5%)
Query: 67 AKLKVAINGFGRIGRNFLR--CWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFE 123
A +KV INGFGRIGR + C G + ++VVA+ D + + ++ +K+D+ G +
Sbjct: 1 APIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPK 60
Query: 124 ADVKPVGT-------DGISVDGKVIQVV-SNRNPVNLPWGDLGIDLVIEGTGVFVDREGA 175
V+ V + D + V+G I+ V + RNP +LPWG LG+D VIE TG+F D+ A
Sbjct: 61 YTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKA 120
Query: 176 GKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKVLDQ 234
HI+ GAKKV+I+AP G T V+GVN Y P ++SNASCTTNCLAP V VL +
Sbjct: 121 EGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTK 180
Query: 235 K-FGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXX 292
+ FGI G MTT HSYT Q NI+P++T
Sbjct: 181 ENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTK 240
Query: 293 XXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 352
G++ RVPTP+ ++ T +E++ A +++A +KGIL DE LVS D
Sbjct: 241 GKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSAD 300
Query: 353 F----RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 399
F R KV++WYDNEW YS RVVDL +A
Sbjct: 301 FINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMA 351
>pdb|1J0X|O Chain O, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|P Chain P, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|Q Chain Q, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|R Chain R, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
Length = 332
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 169/328 (51%), Gaps = 6/328 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVK 127
+KV +NGFGRIGR R ++VVAIND + ++ +YDST G F VK
Sbjct: 1 VKVGVNGFGRIGRLVTRA--AFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVK 58
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
+ ++GK I + R+P N+ WGD G + V+E TGVF E AG H++ GAK+V+
Sbjct: 59 -AENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVI 117
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 247
I+AP D P +V+GVN + Y I+SNAS TTNCLAP KV+ FGI++G MTT H
Sbjct: 118 ISAP-SADAPMFVMGVNHEKYDNSLKIVSNASXTTNCLAPLAKVIHDHFGIVEGLMTTVH 176
Query: 248 SYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
+ T Q NI+P ST G+A RVPTPN
Sbjct: 177 AITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPN 236
Query: 307 XXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXX 366
K +++ +++++ LKGIL ++ +VS DF
Sbjct: 237 VSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGA 296
Query: 367 XXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D VK+I+WYDNE+GYS RVVDL
Sbjct: 297 GIALNDHFVKLISWYDNEFGYSNRVVDL 324
>pdb|2X0N|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|O Chain O, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|P Chain P, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|Q Chain Q, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|R Chain R, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
Length = 359
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 182/349 (52%), Gaps = 18/349 (5%)
Query: 69 LKVAINGFGRIGRNFLR--CWHGRKDSPLEVVAINDTGG-VKQASHLLKYDSTLGIFEAD 125
+KV INGFGRIGR + C G + ++VVA+ D + ++ +KYDS G F+
Sbjct: 3 IKVGINGFGRIGRMVFQALCDDGLLGNEIDVVAVVDMNTDARYFAYQMKYDSVHGKFKHS 62
Query: 126 V-----KP--VGTDGISVDG-KVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGK 177
V KP D + V+G +++ V + RNP +LPWG LG++ VIE TG+F + A
Sbjct: 63 VSTTKSKPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAAEG 122
Query: 178 HIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEP-IISNASCTTNCLAPFVKVL-DQK 235
H++ GA+KV+I+AP G T+V+GVN + Y P E ++SNASCTTNCLAP V VL +
Sbjct: 123 HLRGGARKVVISAPASGGAKTFVMGVNHNNYNPREQHVVSNASCTTNCLAPLVHVLVKEG 182
Query: 236 FGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXX 294
FGI G MTT HSYT Q NI+P++T
Sbjct: 183 FGISTGLMTTVHSYTATQKTVDGVSVKDWRGGRAAALNIIPSTTGAAKAVGMVIPSTQGK 242
Query: 295 XNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF- 353
G+A RVPT + ++ T +E++AA + ++ +K IL DE LVS DF
Sbjct: 243 LTGMAFRVPTADVSVVDLTFIATRDTSIKEIDAALKRASKTYMKNILGYTDEELVSADFI 302
Query: 354 ---RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 399
R K+++WYDNEWGYS RVVDL +A
Sbjct: 303 SDSRSSIYDSKATLQNNLPNERRFFKIVSWYDNEWGYSHRVVDLVRHMA 351
>pdb|3GPD|R Chain R, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
pdb|3GPD|G Chain G, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 334
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 171/330 (51%), Gaps = 8/330 (2%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADV 126
K+KV ++GFGRIGR R +++VAIND + ++ +YDST G F V
Sbjct: 2 KVKVGVDGFGRIGRLVTRA--AFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTV 59
Query: 127 KPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKK 185
K DG + +DGK I + R+P N+ WGD G V+E TGVF E AG H++ GAK+
Sbjct: 60 K--AEDGKLVIDGKAITIFQERDPENIKWGDAGTAYVVESTGVFTTMEKAGAHLKGGAKR 117
Query: 186 VLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 245
++I+AP D P +V+GVN Y IISNASCTTNCLAP KV+ FGI++G MTT
Sbjct: 118 IVISAP-SADAPMFVMGVNHFKYANSLKIISNASCTTNCLAPLAKVIHDHFGIVEGLMTT 176
Query: 246 THSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPT 304
H+ T Q N++P ST G+A RVPT
Sbjct: 177 VHAITATQKTVDSPSGKLWRGGRGAAQNLIPASTGAAKAVGKVIPELDGKLTGMAFRVPT 236
Query: 305 PNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXX 364
N K +++ +E+++ LKGIL ++ +VS DF
Sbjct: 237 ANVSVLDLTCRLEKPAKYDDIKKVVKEASEGPLKGILGYTEDEVVSDDFNGSNHSSIFDA 296
Query: 365 XXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D VK+++WYDNE+GYS+RVVDL
Sbjct: 297 GAGIELNDTFVKLVSWYDNEFGYSERVVDL 326
>pdb|1ZNQ|O Chain O, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|P Chain P, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|R Chain R, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|Q Chain Q, Crsytal Structure Of Human Liver Gapdh
Length = 338
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 167/329 (50%), Gaps = 6/329 (1%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADV 126
K+KV +NGFGRIGR R +++VAIND + ++ +YDST G F V
Sbjct: 6 KVKVGVNGFGRIGRLVTRA--AFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTV 63
Query: 127 KPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186
K + ++G I + R+P + WGD G + V+E TGVF E AG H+Q GAK+V
Sbjct: 64 K-AENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRV 122
Query: 187 LITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 246
+I+AP D P +V+GVN + Y IISNASCTTNCLAP KV+ FGI++G MTT
Sbjct: 123 IISAP-SADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTV 181
Query: 247 HSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTP 305
H+ T Q NI+P ST G+A RVPT
Sbjct: 182 HAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTA 241
Query: 306 NXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
N K +++ +++++ LKGIL + +VS DF
Sbjct: 242 NVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAG 301
Query: 366 XXXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D VK+I+WYDNE+GYS RVVDL
Sbjct: 302 AGIALNDHFVKLISWYDNEFGYSNRVVDL 330
>pdb|1U8F|O Chain O, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|P Chain P, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|Q Chain Q, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|R Chain R, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
Length = 335
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 167/329 (50%), Gaps = 6/329 (1%)
Query: 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADV 126
K+KV +NGFGRIGR R +++VAIND + ++ +YDST G F V
Sbjct: 3 KVKVGVNGFGRIGRLVTRA--AFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTV 60
Query: 127 KPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186
K + ++G I + R+P + WGD G + V+E TGVF E AG H+Q GAK+V
Sbjct: 61 K-AENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRV 119
Query: 187 LITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 246
+I+AP D P +V+GVN + Y IISNASCTTNCLAP KV+ FGI++G MTT
Sbjct: 120 IISAP-SADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTV 178
Query: 247 HSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTP 305
H+ T Q NI+P ST G+A RVPT
Sbjct: 179 HAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTA 238
Query: 306 NXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
N K +++ +++++ LKGIL + +VS DF
Sbjct: 239 NVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAG 298
Query: 366 XXXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D VK+I+WYDNE+GYS RVVDL
Sbjct: 299 AGIALNDHFVKLISWYDNEFGYSNRVVDL 327
>pdb|3DMT|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
Length = 359
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 182/350 (52%), Gaps = 18/350 (5%)
Query: 69 LKVAINGFGRIGRNFLR--CWHGRKDSPLEVVAINDTGG-VKQASHLLKYDSTLGIFEAD 125
+KV INGFGRIGR + C G + ++VVA+ D + ++ ++YD+ G F+ +
Sbjct: 3 IKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYE 62
Query: 126 VKPVGT-------DGISVDG-KVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGK 177
V + D + V+G +++ V + RNP +LPWG LG++ VIE TG+F + A
Sbjct: 63 VTTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEG 122
Query: 178 HIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVL-DQK 235
H++ GA+KV+I+AP G T V+GVN Y P E ++SNAS TTNCLAP V VL +
Sbjct: 123 HLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASXTTNCLAPIVHVLVKEG 182
Query: 236 FGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXX 294
FG+ G MTT HSYT Q NI+P++T
Sbjct: 183 FGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQGK 242
Query: 295 XNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF- 353
G++ RVPTP+ ++ T +E++AA + ++ +KGIL DE LVS DF
Sbjct: 243 LTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSADFI 302
Query: 354 ---RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 400
R K+++WYDNEWGYS RVVDL +A+
Sbjct: 303 NDNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMAS 352
>pdb|2X5K|O Chain O, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|P Chain P, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|Q Chain Q, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|R Chain R, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 170/328 (51%), Gaps = 5/328 (1%)
Query: 69 LKVAINGFGRIGRNFLRCWH--GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADV 126
++VAINGFGRIGRN +R + GR+ + + VVAIN+ +HLLKYD++ G F +V
Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRR-AEITVVAINELADAAGMAHLLKYDTSHGRFAWEV 61
Query: 127 KPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186
+ D + V I+V+ R+ +LPW +LG+D+V++ TGV+ RE HI AGAKKV
Sbjct: 62 RQ-ERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKV 120
Query: 187 LITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 245
L + PG D+ T V GVN D + + I+SNAS TTN + P +K+LD +GI GT+TT
Sbjct: 121 LFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASATTNSIIPVIKLLDDAYGIESGTVTT 180
Query: 246 THSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTP 305
HS DQ +I+P T IA+RVPT
Sbjct: 181 IHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTI 240
Query: 306 NXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
N K A EVN +++A GI+ + PLVSVDF
Sbjct: 241 NVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGT 300
Query: 366 XXXXMGDDMVKVIAWYDNEWGYSQRVVD 393
G ++K + W DNEWG++ R++D
Sbjct: 301 QTRVSGAHLIKTLVWCDNEWGFANRMLD 328
>pdb|3H9E|A Chain A, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3H9E|B Chain B, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3PFW|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3PFW|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3H9E|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
pdb|3H9E|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
Length = 346
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 173/335 (51%), Gaps = 8/335 (2%)
Query: 63 VAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGI 121
V+ +L V INGFGRIGR LR + ++VVA+ND + ++ KYDST G
Sbjct: 2 VSVARELTVGINGFGRIGRLVLRAC---MEKGVKVVAVNDPFIDPEYMVYMFKYDSTHGR 58
Query: 122 FEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQA 181
++ V+ + VD I V + P +PW +G V+E TGV++ + A HI A
Sbjct: 59 YKGSVE-FRNGQLVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISA 117
Query: 182 GAKKVLITAPGKGDIPTYVVGVNADAYKPDEP-IISNASCTTNCLAPFVKVLDQKFGIIK 240
GA++V+I+AP D P +V+GVN + Y P I+SNASCTTNCLAP KV+ ++FGI++
Sbjct: 118 GAQRVVISAPSP-DAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVE 176
Query: 241 GTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIA 299
G MTT HSYT Q NI+P ST G+A
Sbjct: 177 GLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMA 236
Query: 300 LRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXX 359
RVPTP+ ++ + A + +A + GIL+ ++ +VS DF
Sbjct: 237 FRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHS 296
Query: 360 XXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D+ VK+I+WYDNE+GYS RVVDL
Sbjct: 297 SIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDL 331
>pdb|2VYN|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 334
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/329 (35%), Positives = 168/329 (51%), Gaps = 8/329 (2%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVK 127
+KV INGFGRIGR LR + + VVA+ND + ++ KYDST G ++ V+
Sbjct: 2 VKVGINGFGRIGRLVLRVC---MEKGVRVVAVNDPFIDPEYMVYMFKYDSTHGRYKGTVE 58
Query: 128 PVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 187
+ VD I V + P +PW +G V+E TGV++ E A HI +GA++V+
Sbjct: 59 H-KNGRLVVDNLEINVFQXKEPKEIPWSSVGNPYVVEATGVYLSIEAASGHISSGARRVI 117
Query: 188 ITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTT 246
+TAP D P V+GVN Y P ++SNAS TTNCLAP KV+ ++FGI++G MTT
Sbjct: 118 VTAPSP-DAPMLVMGVNEKDYNPGSMTVVSNASXTTNCLAPLAKVIHERFGIVEGLMTTV 176
Query: 247 HSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTP 305
H+YT Q NI+P+ST G+A RVPTP
Sbjct: 177 HAYTATQKTVDGPSKKDWRGGRGAHQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTP 236
Query: 306 NXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
N ++ + A + +A + GIL+ ++ +VS DF
Sbjct: 237 NVSVVDLTCRLAQPASYTAIKEAVKAAAKGPMAGILAYTEDQVVSTDFNGDSHSSIFDAK 296
Query: 366 XXXXMGDDMVKVIAWYDNEWGYSQRVVDL 394
+ D+ VK+++WYDNE+GYS RVVDL
Sbjct: 297 AGIALNDNFVKLVSWYDNEYGYSHRVVDL 325
>pdb|3VAZ|P Chain P, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|R Chain R, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|O Chain O, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|Q Chain Q, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|B Chain B, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|A Chain A, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
Length = 344
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 167/330 (50%), Gaps = 13/330 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KVAINGFGRIGR R ++ LEVVA+ND +HLLKYD+ G F +V+
Sbjct: 11 VKVAINGFGRIGRLAFRRI--QEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV 68
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V G V+GK ++ S + LPW DL ID+V+E TG + D++ A HI+AGAKKVLI
Sbjct: 69 VD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 127
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
+AP GD+ T V N E ++S ASCTTN LAP KVL+ FG+++G MTT H+
Sbjct: 128 SAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHA 187
Query: 249 YTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
YTGDQ NI+P ST +G A RVP
Sbjct: 188 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 247
Query: 307 XXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
K+ E+VN A + +A NE G ++ +VS D
Sbjct: 248 GSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY---TEDEIVSSDVVGMTYGSLFDAT 303
Query: 366 XXXXM--GD-DMVKVIAWYDNEWGYSQRVV 392
M GD +VKV AWYDNE Y+ ++V
Sbjct: 304 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 333
>pdb|3LVF|P Chain P, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|R Chain R, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|O Chain O, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|Q Chain Q, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
Length = 338
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 167/330 (50%), Gaps = 13/330 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KVAINGFGRIGR R ++ LEVVA+ND +HLLKYD+ G F +V+
Sbjct: 5 VKVAINGFGRIGRLAFRRI--QEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV 62
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V G V+GK ++ S + LPW DL ID+V+E TG + D++ A HI+AGAKKVLI
Sbjct: 63 VD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 121
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
+AP GD+ T V N E ++S ASCTTN LAP KVL+ FG+++G MTT H+
Sbjct: 122 SAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHA 181
Query: 249 YTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
YTGDQ NI+P ST +G A RVP
Sbjct: 182 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 241
Query: 307 XXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
K+ E+VN A + +A NE G ++ +VS D
Sbjct: 242 GSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY---TEDEIVSSDVVGMTYGSLFDAT 297
Query: 366 XXXXM--GD-DMVKVIAWYDNEWGYSQRVV 392
M GD +VKV AWYDNE Y+ ++V
Sbjct: 298 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 327
>pdb|3LC7|O Chain O, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|R Chain R, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|Q Chain Q, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|P Chain P, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
Length = 339
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 167/330 (50%), Gaps = 13/330 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KVAINGFGRIGR R ++ LEVVA+ND +HLLKYD+ G F +V+
Sbjct: 6 VKVAINGFGRIGRLAFRRI--QEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV 63
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V G V+GK ++ S + LPW DL ID+V+E TG + D++ A HI+AGAKKVLI
Sbjct: 64 VD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 122
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
+AP GD+ T V N E ++S ASCTTN LAP KVL+ FG+++G MTT H+
Sbjct: 123 SAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHA 182
Query: 249 YTGDQXXXXXXXXX--XXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
YTGDQ NI+P ST +G A RVP
Sbjct: 183 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 242
Query: 307 XXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
K+ E+VN A + +A NE G ++ +VS D
Sbjct: 243 GSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY---TEDEIVSSDVVGMTYGSLFDAT 298
Query: 366 XXXXM--GD-DMVKVIAWYDNEWGYSQRVV 392
M GD +VKV AWYDNE Y+ ++V
Sbjct: 299 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 328
>pdb|3K73|Q Chain Q, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|O Chain O, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|P Chain P, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|R Chain R, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3L6O|Q Chain Q, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|P Chain P, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|R Chain R, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|O Chain O, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3LC2|O Chain O, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|Q Chain Q, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|R Chain R, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|P Chain P, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
Length = 336
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 167/330 (50%), Gaps = 13/330 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KVAINGFGRIGR R ++ LEVVA+ND +HLLKYD+ G F +V+
Sbjct: 3 VKVAINGFGRIGRLAFRRI--QEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV 60
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V G V+GK ++ S + LPW DL ID+V+E TG + D++ A HI+AGAKKVLI
Sbjct: 61 VD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 119
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
+AP GD+ T V N E ++S ASCTTN LAP KVL+ FG+++G MTT H+
Sbjct: 120 SAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHA 179
Query: 249 YTGDQXXXXXXXXX--XXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
YTGDQ NI+P ST +G A RVP
Sbjct: 180 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 239
Query: 307 XXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
K+ E+VN A + +A NE G ++ +VS D
Sbjct: 240 GSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY---TEDEIVSSDVVGMTYGSLFDAT 295
Query: 366 XXXXM--GD-DMVKVIAWYDNEWGYSQRVV 392
M GD +VKV AWYDNE Y+ ++V
Sbjct: 296 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 325
>pdb|3LC1|P Chain P, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|R Chain R, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|O Chain O, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|Q Chain Q, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution
Length = 336
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 167/330 (50%), Gaps = 13/330 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KVAINGFGRIGR R ++ LEVVA+ND +HLLKYD+ G F +V+
Sbjct: 3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV 60
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V G V+GK ++ S + LPW DL ID+V+E TG + D++ A HI+AGAKKVLI
Sbjct: 61 VD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 119
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
+AP GD+ T V N E ++S ASCTTN LAP KVL+ FG+++G MTT ++
Sbjct: 120 SAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTINA 179
Query: 249 YTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
YTGDQ NI+P ST +G A RVP
Sbjct: 180 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 239
Query: 307 XXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
K+ E+VN A + +A NE G ++ +VS D
Sbjct: 240 GSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY---TEDEIVSSDVVGMTYGSLFDAT 295
Query: 366 XXXXM--GD-DMVKVIAWYDNEWGYSQRVV 392
M GD +VKV AWYDNE Y+ ++V
Sbjct: 296 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 325
>pdb|3HQ4|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3KV3|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
Length = 336
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 166/330 (50%), Gaps = 13/330 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KVAINGFGRIGR R ++ LEVVA+ND +HLLKYD+ G F +V+
Sbjct: 3 VKVAINGFGRIGRLAFRRI--QEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV 60
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V G V+GK ++ S + LPW DL ID+V+E TG + D++ A HI+AGAKKVLI
Sbjct: 61 VD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 119
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
+AP GD+ T V N E ++S AS TTN LAP KVL+ FG+++G MTT H+
Sbjct: 120 SAPATGDLKTIVFNTNHQELDGSETVVSGASSTTNSLAPVAKVLNDDFGLVEGLMTTIHA 179
Query: 249 YTGDQXXXXXXXXX--XXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
YTGDQ NI+P ST +G A RVP
Sbjct: 180 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 239
Query: 307 XXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
K+ E+VN A + +A NE G ++ +VS D
Sbjct: 240 GSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY---TEDEIVSSDVVGMTYGSLFDAT 295
Query: 366 XXXXM--GD-DMVKVIAWYDNEWGYSQRVV 392
M GD +VKV AWYDNE Y+ ++V
Sbjct: 296 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 325
>pdb|3K9Q|Q Chain Q, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|O Chain O, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|P Chain P, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|R Chain R, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3L4S|Q Chain Q, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|P Chain P, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|O Chain O, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|R Chain R, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
Length = 336
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 166/330 (50%), Gaps = 13/330 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KVAINGFGRIGR R ++ LEVVA+ND +HLLKYD+ G F +V+
Sbjct: 3 VKVAINGFGRIGRLAFRRI--QEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV 60
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V G V+GK ++ S + LPW DL ID+V+E TG + D++ A HI+AGAKKVLI
Sbjct: 61 V-DGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 119
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
+AP GD+ T V N E ++S AS TTN LAP KVL+ FG+++G MTT H+
Sbjct: 120 SAPATGDLKTIVFNTNHQELDGSETVVSGASGTTNSLAPVAKVLNDDFGLVEGLMTTIHA 179
Query: 249 YTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
YTGDQ NI+P ST +G A RVP
Sbjct: 180 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 239
Query: 307 XXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
K+ E+VN A + +A NE G ++ +VS D
Sbjct: 240 GSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY---TEDEIVSSDVVGMTYGSLFDAT 295
Query: 366 XXXXM--GD-DMVKVIAWYDNEWGYSQRVV 392
M GD +VKV AWYDNE Y+ ++V
Sbjct: 296 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 325
>pdb|3KSD|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSZ|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
Length = 336
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 166/330 (50%), Gaps = 13/330 (3%)
Query: 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKP 128
+KVAINGFGRIGR R ++ LEVVA+ND +HLLKYD+ G F +V+
Sbjct: 3 VKVAINGFGRIGRLAFRRI--QEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV 60
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188
V G V+GK ++ S + LPW DL ID+V+E TG + D++ A HI+AGAKKVLI
Sbjct: 61 VD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 119
Query: 189 TAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 248
+AP GD+ T V N E ++S AS TTN LAP KVL+ FG+++G MTT ++
Sbjct: 120 SAPATGDLKTIVFNTNHQELDGSETVVSGASSTTNSLAPVAKVLNDDFGLVEGLMTTINA 179
Query: 249 YTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPN 306
YTGDQ NI+P ST +G A RVP
Sbjct: 180 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 239
Query: 307 XXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXX 365
K+ E+VN A + +A NE G ++ +VS D
Sbjct: 240 GSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY---TEDEIVSSDVVGMTYGSLFDAT 295
Query: 366 XXXXM--GD-DMVKVIAWYDNEWGYSQRVV 392
M GD +VKV AWYDNE Y+ ++V
Sbjct: 296 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 325
>pdb|3TZ6|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Inhibitor Smcs (Cys) And Phosphate From
Mycobacterium Tuberculosis H37rv
Length = 344
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 195 DIPTYVVGVN--ADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTG 251
D+P V VN DA++ + II+N +CTT P +KVL + +++ +++ + +G
Sbjct: 102 DVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSG 160
>pdb|3VOS|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Glycerol And Sulfate From Mycobacterium
Tuberculosis H37rv
Length = 362
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 195 DIPTYVVGVN--ADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTG 251
D+P V VN DA++ + II+N +CTT P +KVL + +++ +++ + +G
Sbjct: 120 DVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSG 178
>pdb|2YV3|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Thermus Thermophilus Hb8
pdb|2YV3|B Chain B, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Thermus Thermophilus Hb8
Length = 331
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 152 LPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD--IPTYVVGVNADAYK 209
LP G L +DLV+ G + R A + GA V ++ + + +P V VN +
Sbjct: 55 LPEGPLPVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIF 114
Query: 210 PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTG 251
II+N +CTT LA + L + F + + T + +G
Sbjct: 115 QHRGIIANPNCTTAILAMALWPLHRAFQAKRVIVATYQAASG 156
>pdb|2AT3|X Chain X, 1.00 A Crystal Structure Of L123vL133V MUTANT OF
Nitrophorin 4 From Rhodnius Prolixus Complexed With
Imidazole At Ph 5.6
Length = 184
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 24 SGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAI 73
SG A + K+ D F+ V LQ +LG ++ ++KV +KVA+
Sbjct: 50 SGKLKEALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAV 99
>pdb|2AT0|X Chain X, 1.00 A Crystal Structure Of L133v Mutant Of Nitrophorin
4 From Rhodnius Prolixus Complexed With Nitric Oxide At
Ph 5.6
pdb|3C76|X Chain X, 1.07 A Crystal Structure Of L133v Mutant Of Nitrophorin
4 From Rhodnius Prolixus Complexed With Ammonia At Ph
7.5
Length = 184
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 24 SGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAI 73
SG A + K+ D F+ V LQ +LG ++ ++KV +KVA+
Sbjct: 50 SGKLKEALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAV 99
>pdb|1SY0|A Chain A, 1.15 A Crystal Structure Of T121v Mutant Of Nitrophorin
4 From Rhodnius Prolixus
pdb|1SY1|A Chain A, 1.0 A Crystal Structure Of T121v Mutant Of Nitrophorin 4
Complexed With Nitric Oxide
Length = 184
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 24 SGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAI 73
SG A + K+ D F+ V LQ +LG ++ ++KV +KVA+
Sbjct: 50 SGKLKEALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAV 99
>pdb|1NP4|A Chain A, Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus
pdb|1EQD|A Chain A, Crystal Structure Of Nitrophorin 4 Complexed With Cn
pdb|1ERX|A Chain A, Crystal Structure Of Nitrophorin 4 Complexed With No
pdb|1D3S|A Chain A, 1.4 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixis At Ph5.6.
pdb|1D2U|A Chain A, 1.15 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus
pdb|1IKE|A Chain A, Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Complexed With Histamine At 1.5 A Resolution
pdb|1IKJ|A Chain A, 1.27 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Complexed With Imidazole
pdb|1KOI|A Chain A, Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Complexed With Nitric Oxide At 1.08 A
Resolution
pdb|1ML7|A Chain A, Crystal Structure Of Nitrophorin 4 Complexed With 4-
Iodopyrazole
pdb|1U0X|A Chain A, Crystal Structure Of Nitrophorin 4 Under Pressure Of
Xenon (200 Psi)
pdb|1X8N|A Chain A, 1.08 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Complexed With Nitric Oxide At Ph 7.4
pdb|1X8O|A Chain A, 1.01 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Complexed With Nitric Oxide At Ph 5.6
pdb|1X8P|A Chain A, 0.85 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Complexed With Ammonia At Ph 7.4
pdb|1X8Q|A Chain A, 0.85 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus In Complex With Water At Ph 5.6
pdb|1YWA|A Chain A, 0.9 A Structure Of Np4 From Rhodnius Prolixus Complexed
With Co At Ph 5.6
pdb|1YWB|A Chain A, 0.9 A Structure Of Np4 From Rhodnius Prolixus Complexed
With No At Ph 5.6
pdb|1YWC|A Chain A, Structure Of The Ferrous Co Complex Of Np4 From Rhodnius
Prolixus At Ph 7.0
pdb|1YWD|A Chain A, 1.08 A Structure Of Ferrous Np4 (Aquo Complex)
pdb|2AT5|X Chain X, 1.22 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Containing Fe(Iii) Deuteroporphyrin Ix
Complexed With Nitric Oxide At Ph 5.6
pdb|2AT6|X Chain X, 1.22 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Containing Fe(Iii) Deuteroporphyrin Ix
Complexed With Water At Ph 5.6
pdb|2AT8|X Chain X, 0.96 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Containing Fe(Iii) 2,4 Dimethyl
Deuteroporphyrin Ix Complexed With Nitric Oxide At Ph
5.6
pdb|2OFM|X Chain X, 1.11 A Crystal Structure Of Apo Nitrophorin 4 From
Rhodnius Prolixus
pdb|3C77|X Chain X, 1.08 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Containing Fe(Iii) Deuteroporphyrin Ix
Complexed With Ammonia At Ph 7.5
pdb|3C78|X Chain X, 0.98 A Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Containing Fe(Iii) 2,4 Dimethyl
Deuteroporphyrin Ix Complexed With Ammonia At Ph 7.5
pdb|3MVF|A Chain A, Crystal Structure Of Nitrophorin 4 From Rhodnius
Prolixus Complexed With Nitrite At Ph 7.4
Length = 184
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 24 SGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAI 73
SG A + K+ D F+ V LQ +LG ++ ++KV +KVA+
Sbjct: 50 SGKLKEALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAV 99
>pdb|3TGA|A Chain A, Crystal Structure Of L130r Mutant Of Nitrophorin 4 From
Rhodnius Prolixus At Ph 7.4
pdb|3TGB|A Chain A, Crystal Structure Of L130r Mutant Of Nitrophorin 4 From
Rhodnius Prolixus Complexed With Imidazole At Ph 7.4
pdb|3TGC|A Chain A, Crystal Structure Of L130r Mutant Of Nitrophorin 4 From
Rhodnius Prolixus Complexed With Nitrite At Ph 7.4
Length = 184
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 24 SGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAI 73
SG A + K+ D F+ V LQ +LG ++ ++KV +KVA+
Sbjct: 50 SGKLKEALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAV 99
>pdb|1SXU|A Chain A, 1.4 A Crystal Structure Of D30n Mutant Of Nitrophorin 4
From Rhodnius Prolixus Complexed With Imidazole
pdb|1SXY|A Chain A, 1.07 A Crystal Structure Of D30n Mutant Of Nitrophorin 4
From Rhodnius Prolixus
pdb|1SY3|A Chain A, 1.00 A Crystal Structure Of D30n Mutant Of Nitrophorin 4
From Rhodnius Prolixus Complexed With Nitric Oxide
Length = 184
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 24 SGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAI 73
SG A + K+ D F+ V LQ +LG ++ ++KV +KVA+
Sbjct: 50 SGKLKEALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAV 99
>pdb|3FLL|A Chain A, Crystal Structure Of E55q Mutant Of Nitrophorin 4
Length = 184
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 24 SGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAI 73
SG A + K+ D F+ V LQ +LG ++ ++KV +KVA+
Sbjct: 50 SGKLKQALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAV 99
>pdb|1SXW|A Chain A, 1.05 A Crystal Structure Of D30a Mutant Of Nitrophorin 4
From Rhodnius Prolixus Complexed With Nitric Oxide
Length = 184
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 24 SGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAI 73
SG A + K+ D F+ V LQ +LG ++ ++KV +KVA+
Sbjct: 50 SGKLKEALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAV 99
>pdb|1SXX|A Chain A, 1.0 A Crystal Structure Of D129aL130A MUTANT OF
Nitrophorin 4 Complexed With Nitric Oxide
pdb|1SY2|A Chain A, 1.0 A Crystal Structure Of D129aL130A MUTANT OF
Nitrophorin 4
Length = 184
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 24 SGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAI 73
SG A + K+ D F+ V LQ +LG ++ ++KV +KVA+
Sbjct: 50 SGKLKEALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAV 99
>pdb|2OFR|X Chain X, 1.00 A Crystal Structure Of V36aD129AL130A MUTANT OF
Nitrophorin 4 From Rhodnius Prolixus Complexed With
Nitric Oxide At Ph 5.6
Length = 184
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 24 SGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAI 73
SG A + K+ D F+ V LQ +LG ++ ++KV +KVA+
Sbjct: 50 SGKLKEALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAV 99
>pdb|2YD1|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of
Drosophila Receptor Protein Tyrosine Phosphatase Dlar
Length = 212
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 89 GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVG 130
GR D+P E VA N G A D+TL I+E D P G
Sbjct: 74 GRDDAPYECVAENGVGDAVSA------DATLTIYEGDKTPAG 109
>pdb|3PXJ|A Chain A, Tandem Ig Repeats Of Dlar
pdb|3PXJ|B Chain B, Tandem Ig Repeats Of Dlar
pdb|3PXJ|C Chain C, Tandem Ig Repeats Of Dlar
pdb|3PXJ|D Chain D, Tandem Ig Repeats Of Dlar
Length = 210
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 89 GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVG 130
GR D+P E VA N G A D+TL I+E D P G
Sbjct: 76 GRDDAPYECVAENGVGDAVSA------DATLTIYEGDKTPAG 111
>pdb|1YS4|A Chain A, Structure Of Aspartate-Semialdehyde Dehydrogenase From
Methanococcus Jannaschii
pdb|1YS4|B Chain B, Structure Of Aspartate-Semialdehyde Dehydrogenase From
Methanococcus Jannaschii
Length = 354
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Query: 195 DIPTYVVGVNADAYKP----------DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMT 244
D+P + VNAD + D II+N +C+T C +K + KFG+ +
Sbjct: 122 DVPLVIPEVNADHLELIEIQREKRGWDGAIITNPNCSTICAVITLKPIXDKFGLEAVFIA 181
Query: 245 TTHSYTG 251
T + +G
Sbjct: 182 TXQAVSG 188
>pdb|3AOE|A Chain A, Crystal Structure Of Hetero-Hexameric Glutamate
Dehydrogenase From Thermus Thermophilus (Leu Bound Form)
pdb|3AOE|B Chain B, Crystal Structure Of Hetero-Hexameric Glutamate
Dehydrogenase From Thermus Thermophilus (Leu Bound Form)
Length = 424
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 55 SSSSGYRKVAAQAK-LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHL 112
++++ K+ Q + +VAI GFG +G R +H D VVA+ D TG V + +
Sbjct: 205 TAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFH---DHGARVVAVQDHTGTVYNEAGI 261
Query: 113 LKYD 116
YD
Sbjct: 262 DPYD 265
>pdb|3AOG|A Chain A, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|B Chain B, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|C Chain C, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|D Chain D, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|E Chain E, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|F Chain F, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|G Chain G, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|H Chain H, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|I Chain I, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|J Chain J, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|K Chain K, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
pdb|3AOG|L Chain L, Crystal Structure Of Glutamate Dehydrogenase (Gdhb) From
Thermus Thermophilus (Glu Bound Form)
Length = 440
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 55 SSSSGYRKVAAQAK-LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHL 112
++++ K+ Q + +VAI GFG +G R +H D VVA+ D TG V + +
Sbjct: 221 TAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFH---DHGARVVAVQDHTGTVYNEAGI 277
Query: 113 LKYD 116
YD
Sbjct: 278 DPYD 281
>pdb|1CF2|P Chain P, Three-Dimensional Structure Of
D-Glyceraldehyde-3-Phosphate Dehydrogenase From The
Hyperthermophilic Archaeon Methanothermus Fervidus
pdb|1CF2|R Chain R, Three-Dimensional Structure Of
D-Glyceraldehyde-3-Phosphate Dehydrogenase From The
Hyperthermophilic Archaeon Methanothermus Fervidus
pdb|1CF2|O Chain O, Three-Dimensional Structure Of
D-Glyceraldehyde-3-Phosphate Dehydrogenase From The
Hyperthermophilic Archaeon Methanothermus Fervidus
pdb|1CF2|Q Chain Q, Three-Dimensional Structure Of
D-Glyceraldehyde-3-Phosphate Dehydrogenase From The
Hyperthermophilic Archaeon Methanothermus Fervidus
Length = 337
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 71/175 (40%), Gaps = 23/175 (13%)
Query: 71 VAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLK--YDSTLGIFEADVKP 128
VAING+G +G+ + D ++V+ ++ T +A LK YD + I E VK
Sbjct: 4 VAINGYGTVGKRVADAIAQQDD--MKVIGVSKTRPDFEARMALKKGYDLYVAIPER-VKL 60
Query: 129 VGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTG---VFVDREGAGKHIQAGAKK 185
GI V G V + L D+ ID EG G + + +E K I G +K
Sbjct: 61 FEKAGIEVAGTVDDM--------LDEADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK 112
Query: 186 VLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIK 240
+ Y ++Y D + SC T L +K L FGI K
Sbjct: 113 HEDIGLSFNSLSNY-----EESYGKDYTRV--VSCNTTGLCRTLKPLHDSFGIKK 160
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,439,257
Number of Sequences: 62578
Number of extensions: 414498
Number of successful extensions: 1183
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 819
Number of HSP's gapped (non-prelim): 98
length of query: 403
length of database: 14,973,337
effective HSP length: 101
effective length of query: 302
effective length of database: 8,652,959
effective search space: 2613193618
effective search space used: 2613193618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)