Query 015637
Match_columns 403
No_of_seqs 251 out of 1867
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 16:04:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015637.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015637hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3doc_A Glyceraldehyde 3-phosph 100.0 1E-121 3E-126 911.1 31.7 334 67-401 1-334 (335)
2 4dib_A GAPDH, glyceraldehyde 3 100.0 1E-121 4E-126 912.3 29.9 332 68-402 4-336 (345)
3 3pym_A GAPDH 3, glyceraldehyde 100.0 3E-120 9E-125 900.0 32.5 328 69-400 2-331 (332)
4 3v1y_O PP38, glyceraldehyde-3- 100.0 5E-120 2E-124 899.3 30.8 330 68-401 3-336 (337)
5 3ids_C GAPDH, glyceraldehyde-3 100.0 2E-120 7E-125 907.4 27.3 332 67-401 1-353 (359)
6 3lvf_P GAPDH 1, glyceraldehyde 100.0 4E-119 1E-123 892.6 29.4 331 66-403 2-338 (338)
7 3h9e_O Glyceraldehyde-3-phosph 100.0 1E-118 4E-123 892.4 32.3 329 68-401 7-338 (346)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 3E-119 1E-123 898.0 25.1 331 66-400 19-356 (356)
9 1obf_O Glyceraldehyde 3-phosph 100.0 1E-116 4E-121 877.4 31.6 331 69-401 2-334 (335)
10 2b4r_O Glyceraldehyde-3-phosph 100.0 2E-116 8E-121 877.6 29.0 330 68-400 11-344 (345)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 5E-116 2E-120 875.0 25.7 331 67-402 1-341 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 4E-109 1E-113 824.4 29.3 328 69-401 1-329 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 6E-108 2E-112 827.7 30.6 335 67-402 1-337 (380)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 4E-107 1E-111 811.5 31.4 336 68-403 1-336 (337)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 1E-106 5E-111 808.8 32.6 336 67-403 1-338 (339)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 2E-105 5E-110 799.7 30.2 330 69-401 2-332 (334)
17 3cps_A Glyceraldehyde 3-phosph 100.0 2E-104 6E-109 797.0 28.6 332 67-401 16-352 (354)
18 1hdg_O Holo-D-glyceraldehyde-3 100.0 6E-104 2E-108 787.5 30.3 328 69-400 1-331 (332)
19 1gad_O D-glyceraldehyde-3-phos 100.0 2E-103 7E-108 783.6 29.0 327 69-399 2-329 (330)
20 2x5j_O E4PDH, D-erythrose-4-ph 100.0 2E-103 8E-108 785.6 28.3 332 67-401 1-336 (339)
21 3e5r_O PP38, glyceraldehyde-3- 100.0 2E-102 5E-107 779.0 31.2 331 67-401 2-336 (337)
22 1u8f_O GAPDH, glyceraldehyde-3 100.0 1E-101 4E-106 772.1 29.5 331 67-401 2-334 (335)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 4.2E-61 1.4E-65 481.2 14.4 241 67-335 1-253 (343)
24 2hjs_A USG-1 protein homolog; 100.0 2E-49 6.7E-54 396.0 26.1 302 67-401 5-336 (340)
25 2yv3_A Aspartate-semialdehyde 100.0 1E-49 3.5E-54 396.8 20.1 293 69-400 1-329 (331)
26 2r00_A Aspartate-semialdehyde 100.0 1.8E-48 6.2E-53 388.5 25.7 299 68-401 3-334 (336)
27 1cf2_P Protein (glyceraldehyde 100.0 9.1E-50 3.1E-54 398.1 9.4 274 68-384 1-285 (337)
28 1b7g_O Protein (glyceraldehyde 100.0 2E-46 6.7E-51 374.4 12.4 226 69-334 2-245 (340)
29 2czc_A Glyceraldehyde-3-phosph 100.0 6.7E-46 2.3E-50 369.1 13.1 239 67-337 1-246 (334)
30 1t4b_A Aspartate-semialdehyde 100.0 2.5E-46 8.5E-51 377.3 9.4 237 69-333 2-299 (367)
31 1xyg_A Putative N-acetyl-gamma 100.0 4.2E-42 1.4E-46 345.5 16.7 293 68-399 16-344 (359)
32 2ep5_A 350AA long hypothetical 100.0 2.6E-42 8.9E-47 345.6 13.3 240 68-334 4-270 (350)
33 1ys4_A Aspartate-semialdehyde 100.0 4.5E-41 1.6E-45 336.8 15.2 253 67-344 7-286 (354)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 6.8E-40 2.3E-44 327.7 13.5 229 68-335 4-264 (345)
35 3pwk_A Aspartate-semialdehyde 100.0 1.3E-38 4.4E-43 320.9 22.1 298 67-400 1-343 (366)
36 3uw3_A Aspartate-semialdehyde 100.0 1.4E-39 4.7E-44 329.1 11.0 294 68-400 4-376 (377)
37 4dpk_A Malonyl-COA/succinyl-CO 100.0 2.7E-39 9.4E-44 325.1 11.8 305 67-401 6-354 (359)
38 4dpl_A Malonyl-COA/succinyl-CO 100.0 2.7E-39 9.4E-44 325.1 11.4 305 67-401 6-354 (359)
39 3pzr_A Aspartate-semialdehyde 100.0 2.5E-39 8.5E-44 326.5 10.4 292 69-400 1-368 (370)
40 3tz6_A Aspartate-semialdehyde 100.0 1.9E-37 6.7E-42 310.1 22.5 291 69-400 2-342 (344)
41 3hsk_A Aspartate-semialdehyde 100.0 2.8E-37 9.7E-42 312.6 15.1 241 67-335 18-301 (381)
42 3dr3_A N-acetyl-gamma-glutamyl 100.0 1.4E-35 4.7E-40 296.0 13.2 290 67-399 4-328 (337)
43 2nqt_A N-acetyl-gamma-glutamyl 100.0 1.6E-33 5.4E-38 282.6 18.0 299 68-398 9-336 (352)
44 1vkn_A N-acetyl-gamma-glutamyl 100.0 1.9E-29 6.3E-34 252.9 10.1 227 68-333 13-272 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.7 5.2E-08 1.8E-12 95.8 10.3 150 68-251 4-164 (312)
46 1f06_A MESO-diaminopimelate D- 97.5 0.00012 4E-09 71.7 7.1 88 68-191 3-90 (320)
47 3ohs_X Trans-1,2-dihydrobenzen 97.5 0.00017 6E-09 70.1 7.9 98 67-191 1-98 (334)
48 4hkt_A Inositol 2-dehydrogenas 97.4 0.00029 1E-08 68.3 8.4 94 67-191 2-95 (331)
49 3mz0_A Inositol 2-dehydrogenas 97.4 0.0004 1.4E-08 67.8 8.5 97 67-191 1-98 (344)
50 3ezy_A Dehydrogenase; structur 97.3 0.00034 1.2E-08 68.3 7.6 96 67-191 1-96 (344)
51 3i23_A Oxidoreductase, GFO/IDH 97.3 0.0002 6.8E-09 70.3 5.6 96 67-191 1-97 (349)
52 3bio_A Oxidoreductase, GFO/IDH 97.3 0.00043 1.5E-08 67.2 7.8 86 68-188 9-94 (304)
53 3ec7_A Putative dehydrogenase; 97.3 0.00062 2.1E-08 67.1 8.6 97 67-191 22-119 (357)
54 3kux_A Putative oxidoreductase 97.2 0.001 3.4E-08 65.3 9.7 92 68-191 7-99 (352)
55 3euw_A MYO-inositol dehydrogen 97.2 0.00072 2.4E-08 65.9 8.4 94 68-191 4-97 (344)
56 3f4l_A Putative oxidoreductase 97.2 0.00052 1.8E-08 67.1 6.8 95 67-191 1-97 (345)
57 2ejw_A HDH, homoserine dehydro 97.2 0.00053 1.8E-08 67.9 6.8 87 68-189 3-96 (332)
58 3gdo_A Uncharacterized oxidore 97.2 0.0011 3.9E-08 65.2 9.1 92 68-191 5-97 (358)
59 3rc1_A Sugar 3-ketoreductase; 97.1 0.00053 1.8E-08 67.4 6.3 96 66-191 24-121 (350)
60 3ijp_A DHPR, dihydrodipicolina 97.1 0.00038 1.3E-08 67.8 5.0 97 67-188 20-117 (288)
61 3db2_A Putative NADPH-dependen 97.1 0.00072 2.5E-08 66.3 7.0 95 67-191 4-98 (354)
62 3e18_A Oxidoreductase; dehydro 97.1 0.0014 4.7E-08 64.7 9.0 93 68-191 5-97 (359)
63 3mtj_A Homoserine dehydrogenas 97.1 0.0011 3.8E-08 68.1 8.6 94 68-191 10-111 (444)
64 3e9m_A Oxidoreductase, GFO/IDH 97.1 0.001 3.5E-08 64.7 7.8 95 68-191 5-99 (330)
65 4f3y_A DHPR, dihydrodipicolina 97.1 0.00051 1.7E-08 66.2 5.3 95 68-188 7-102 (272)
66 3e82_A Putative oxidoreductase 97.0 0.0018 6.2E-08 64.0 9.4 92 68-191 7-99 (364)
67 3ing_A Homoserine dehydrogenas 97.0 0.001 3.5E-08 65.6 7.4 36 68-103 4-43 (325)
68 2ho3_A Oxidoreductase, GFO/IDH 97.0 0.0018 6.2E-08 62.6 8.5 93 69-191 2-94 (325)
69 2dc1_A L-aspartate dehydrogena 96.9 0.0011 3.7E-08 61.6 5.9 135 69-249 1-136 (236)
70 3ic5_A Putative saccharopine d 96.9 0.0014 4.9E-08 52.6 6.0 97 67-189 4-100 (118)
71 1ydw_A AX110P-like protein; st 96.9 0.0018 6E-08 63.7 7.7 98 68-191 6-103 (362)
72 3cea_A MYO-inositol 2-dehydrog 96.8 0.0028 9.7E-08 61.5 8.7 95 68-191 8-103 (346)
73 3evn_A Oxidoreductase, GFO/IDH 96.8 0.0016 5.6E-08 63.1 7.0 95 68-191 5-99 (329)
74 1tlt_A Putative oxidoreductase 96.8 0.0014 4.9E-08 63.1 6.3 92 68-191 5-97 (319)
75 3q2i_A Dehydrogenase; rossmann 96.8 0.0016 5.5E-08 63.8 6.6 95 68-191 13-107 (354)
76 3c1a_A Putative oxidoreductase 96.8 0.002 6.8E-08 62.1 7.1 93 67-191 9-101 (315)
77 2ixa_A Alpha-N-acetylgalactosa 96.8 0.0039 1.3E-07 63.3 9.4 101 68-191 20-123 (444)
78 4h3v_A Oxidoreductase domain p 96.8 0.0011 3.8E-08 64.7 5.2 98 67-191 4-107 (390)
79 3c8m_A Homoserine dehydrogenas 96.8 0.0008 2.7E-08 66.4 4.0 36 68-103 6-46 (331)
80 3fhl_A Putative oxidoreductase 96.8 0.0025 8.6E-08 62.7 7.6 92 68-191 5-97 (362)
81 4had_A Probable oxidoreductase 96.8 0.003 1E-07 61.4 8.1 95 68-191 23-118 (350)
82 4gqa_A NAD binding oxidoreduct 96.7 0.0016 5.5E-08 65.1 6.2 97 68-191 26-128 (412)
83 3qy9_A DHPR, dihydrodipicolina 96.7 0.0022 7.5E-08 60.8 6.9 33 68-103 3-35 (243)
84 4ew6_A D-galactose-1-dehydroge 96.7 0.00084 2.9E-08 65.6 4.0 87 68-191 25-113 (330)
85 3moi_A Probable dehydrogenase; 96.7 0.0021 7.1E-08 64.0 6.8 95 67-191 1-96 (387)
86 3do5_A HOM, homoserine dehydro 96.7 0.0029 1E-07 62.4 7.6 33 69-103 3-43 (327)
87 1p9l_A Dihydrodipicolinate red 96.7 0.0022 7.4E-08 60.9 6.1 70 69-184 1-71 (245)
88 1xea_A Oxidoreductase, GFO/IDH 96.7 0.0053 1.8E-07 59.3 9.0 94 67-191 1-95 (323)
89 1h6d_A Precursor form of gluco 96.6 0.0053 1.8E-07 62.3 8.8 99 68-191 83-182 (433)
90 4fb5_A Probable oxidoreductase 96.6 0.0033 1.1E-07 61.3 7.0 99 66-191 22-126 (393)
91 3upl_A Oxidoreductase; rossman 96.5 0.0035 1.2E-07 64.5 7.0 107 67-183 22-133 (446)
92 3m2t_A Probable dehydrogenase; 96.5 0.0053 1.8E-07 60.5 8.1 95 68-191 5-100 (359)
93 1zh8_A Oxidoreductase; TM0312, 96.5 0.005 1.7E-07 60.1 7.7 97 67-191 17-114 (340)
94 3uuw_A Putative oxidoreductase 96.5 0.0045 1.5E-07 59.3 7.0 93 68-192 6-99 (308)
95 1j5p_A Aspartate dehydrogenase 96.3 0.0049 1.7E-07 58.9 6.3 77 68-186 12-88 (253)
96 1r0k_A 1-deoxy-D-xylulose 5-ph 96.2 0.0059 2E-07 61.7 6.6 39 69-108 5-44 (388)
97 1dih_A Dihydrodipicolinate red 96.2 0.006 2.1E-07 58.5 5.9 99 68-191 5-104 (273)
98 3oa2_A WBPB; oxidoreductase, s 96.1 0.0065 2.2E-07 59.0 6.0 94 68-191 3-105 (318)
99 2p2s_A Putative oxidoreductase 96.0 0.015 5.1E-07 56.3 8.3 94 68-191 4-98 (336)
100 3ip3_A Oxidoreductase, putativ 96.0 0.0029 9.8E-08 61.6 3.1 96 67-191 1-99 (337)
101 1ebf_A Homoserine dehydrogenas 96.0 0.0095 3.2E-07 59.4 6.8 37 67-103 3-40 (358)
102 3o9z_A Lipopolysaccaride biosy 96.0 0.016 5.6E-07 56.0 8.3 93 69-191 4-104 (312)
103 2glx_A 1,5-anhydro-D-fructose 96.0 0.013 4.6E-07 56.3 7.6 93 69-191 1-94 (332)
104 1lc0_A Biliverdin reductase A; 96.0 0.013 4.5E-07 56.2 7.4 88 68-191 7-97 (294)
105 2nvw_A Galactose/lactose metab 95.9 0.012 4.1E-07 60.6 7.1 98 68-191 39-146 (479)
106 3u3x_A Oxidoreductase; structu 95.6 0.015 5.2E-07 57.3 6.4 94 68-191 26-120 (361)
107 3v5n_A Oxidoreductase; structu 95.5 0.021 7E-07 57.5 7.2 97 68-191 37-142 (417)
108 2dt5_A AT-rich DNA-binding pro 95.4 0.029 1E-06 51.9 7.0 96 68-193 80-175 (211)
109 3dty_A Oxidoreductase, GFO/IDH 95.2 0.024 8.4E-07 56.4 6.4 102 68-191 12-117 (398)
110 4gmf_A Yersiniabactin biosynth 95.2 0.053 1.8E-06 54.2 8.7 92 68-191 7-102 (372)
111 3a06_A 1-deoxy-D-xylulose 5-ph 94.9 0.078 2.7E-06 53.2 8.9 109 69-190 4-116 (376)
112 3btv_A Galactose/lactose metab 94.8 0.02 6.8E-07 58.1 4.6 98 68-191 20-127 (438)
113 3oqb_A Oxidoreductase; structu 94.7 0.041 1.4E-06 54.2 6.3 96 67-191 5-115 (383)
114 3dqp_A Oxidoreductase YLBE; al 94.7 0.051 1.8E-06 48.6 6.5 31 69-102 1-32 (219)
115 1y81_A Conserved hypothetical 94.7 0.098 3.3E-06 44.9 7.8 85 68-191 14-102 (138)
116 2vt3_A REX, redox-sensing tran 94.5 0.097 3.3E-06 48.5 7.9 95 68-193 85-180 (215)
117 3ius_A Uncharacterized conserv 94.4 0.3 1E-05 45.1 11.3 34 66-102 3-36 (286)
118 3ggo_A Prephenate dehydrogenas 94.1 0.22 7.5E-06 48.2 9.9 32 67-101 32-65 (314)
119 3abi_A Putative uncharacterize 94.0 0.058 2E-06 53.1 5.6 93 68-191 16-108 (365)
120 2duw_A Putative COA-binding pr 94.0 0.18 6.3E-06 43.4 8.1 85 69-190 14-102 (145)
121 3c24_A Putative oxidoreductase 93.9 0.15 5E-06 48.1 8.2 32 67-101 10-42 (286)
122 3m2p_A UDP-N-acetylglucosamine 93.8 0.11 3.7E-06 48.9 7.0 33 67-102 1-34 (311)
123 2bma_A Glutamate dehydrogenase 93.7 0.16 5.6E-06 52.4 8.6 103 68-188 252-365 (470)
124 3fwz_A Inner membrane protein 93.7 0.065 2.2E-06 45.2 4.8 41 64-109 3-43 (140)
125 1iuk_A Hypothetical protein TT 93.5 0.16 5.4E-06 43.6 6.8 86 69-191 14-103 (140)
126 2d59_A Hypothetical protein PH 93.4 0.2 7E-06 43.0 7.5 83 69-190 23-109 (144)
127 2r6j_A Eugenol synthase 1; phe 93.3 0.056 1.9E-06 51.1 4.0 33 67-102 10-43 (318)
128 3c1o_A Eugenol synthase; pheny 93.2 0.088 3E-06 49.7 5.2 33 67-102 3-36 (321)
129 1qyd_A Pinoresinol-lariciresin 93.1 0.076 2.6E-06 49.8 4.5 31 69-102 5-36 (313)
130 1hdo_A Biliverdin IX beta redu 93.1 0.092 3.2E-06 45.7 4.8 31 69-102 4-35 (206)
131 3keo_A Redox-sensing transcrip 93.1 0.13 4.3E-06 47.8 5.9 99 68-192 84-182 (212)
132 3dhn_A NAD-dependent epimerase 93.0 0.092 3.2E-06 46.9 4.9 31 69-102 5-36 (227)
133 3e48_A Putative nucleoside-dip 93.0 0.069 2.4E-06 49.7 4.1 32 69-102 1-33 (289)
134 3i6i_A Putative leucoanthocyan 93.0 0.075 2.6E-06 51.0 4.4 32 68-102 10-42 (346)
135 1bgv_A Glutamate dehydrogenase 92.4 0.24 8.1E-06 50.9 7.3 102 68-188 230-343 (449)
136 3d1l_A Putative NADP oxidoredu 92.1 0.34 1.2E-05 44.9 7.5 31 69-102 11-41 (266)
137 2nu8_A Succinyl-COA ligase [AD 91.9 0.25 8.7E-06 47.4 6.6 87 68-188 7-94 (288)
138 3b1f_A Putative prephenate deh 91.8 0.38 1.3E-05 45.1 7.6 33 68-101 6-38 (290)
139 3ff4_A Uncharacterized protein 91.8 0.4 1.4E-05 40.5 6.9 82 70-191 6-91 (122)
140 1qyc_A Phenylcoumaran benzylic 91.6 0.13 4.5E-06 48.0 4.1 31 69-102 5-36 (308)
141 2x4g_A Nucleoside-diphosphate- 91.6 0.69 2.4E-05 43.6 9.2 31 69-102 14-45 (342)
142 2tmg_A Protein (glutamate dehy 91.4 0.26 9.1E-06 50.1 6.4 94 68-189 209-313 (415)
143 2yfq_A Padgh, NAD-GDH, NAD-spe 91.1 0.17 6E-06 51.5 4.8 34 68-104 212-245 (421)
144 3e8x_A Putative NAD-dependent 91.1 1.1 3.9E-05 40.1 9.7 32 68-102 21-53 (236)
145 4ina_A Saccharopine dehydrogen 90.8 0.24 8.2E-06 49.6 5.4 155 69-243 2-167 (405)
146 2gas_A Isoflavone reductase; N 90.7 0.17 5.7E-06 47.2 3.9 31 69-102 3-34 (307)
147 1lld_A L-lactate dehydrogenase 90.6 0.93 3.2E-05 43.1 9.2 32 67-101 6-39 (319)
148 1oi7_A Succinyl-COA synthetase 90.5 0.29 1E-05 47.0 5.4 86 68-188 7-94 (288)
149 1lss_A TRK system potassium up 90.0 0.34 1.2E-05 39.5 4.7 31 69-102 5-35 (140)
150 3kb6_A D-lactate dehydrogenase 89.9 0.37 1.3E-05 47.3 5.8 31 68-101 141-171 (334)
151 1i36_A Conserved hypothetical 89.8 0.69 2.4E-05 42.6 7.3 28 69-99 1-28 (264)
152 1vpd_A Tartronate semialdehyde 89.8 0.24 8.4E-06 46.5 4.2 32 67-101 4-35 (299)
153 3llv_A Exopolyphosphatase-rela 89.6 0.32 1.1E-05 40.4 4.4 31 69-102 7-37 (141)
154 3pp8_A Glyoxylate/hydroxypyruv 89.5 0.27 9.3E-06 47.9 4.4 32 68-102 139-170 (315)
155 2y1e_A 1-deoxy-D-xylulose 5-ph 89.4 0.46 1.6E-05 47.8 6.0 43 67-111 21-65 (398)
156 3qvo_A NMRA family protein; st 89.4 0.37 1.3E-05 43.6 4.9 33 68-102 23-56 (236)
157 4g2n_A D-isomer specific 2-hyd 89.4 0.3 1E-05 48.3 4.6 32 68-102 173-204 (345)
158 1zej_A HBD-9, 3-hydroxyacyl-CO 89.3 1.1 3.9E-05 43.1 8.6 75 68-171 12-86 (293)
159 3ego_A Probable 2-dehydropanto 89.3 1.1 3.6E-05 43.0 8.3 32 67-102 1-32 (307)
160 2pi1_A D-lactate dehydrogenase 89.2 0.3 1E-05 48.0 4.4 32 68-102 141-172 (334)
161 3evt_A Phosphoglycerate dehydr 89.1 0.34 1.2E-05 47.5 4.7 32 68-102 137-168 (324)
162 1id1_A Putative potassium chan 88.8 0.4 1.4E-05 40.7 4.5 32 68-102 3-34 (153)
163 3hg7_A D-isomer specific 2-hyd 88.6 0.35 1.2E-05 47.4 4.5 32 68-102 140-171 (324)
164 3ce6_A Adenosylhomocysteinase; 88.6 0.72 2.5E-05 47.8 7.1 31 68-101 274-304 (494)
165 1xdw_A NAD+-dependent (R)-2-hy 88.6 0.35 1.2E-05 47.3 4.4 32 68-102 146-177 (331)
166 1qp8_A Formate dehydrogenase; 88.5 0.35 1.2E-05 46.8 4.3 31 68-101 124-154 (303)
167 2yq5_A D-isomer specific 2-hyd 88.5 0.35 1.2E-05 47.8 4.5 32 68-102 148-179 (343)
168 3mog_A Probable 3-hydroxybutyr 88.5 0.6 2.1E-05 48.1 6.3 39 69-112 6-44 (483)
169 2wm3_A NMRA-like family domain 88.5 0.37 1.2E-05 45.0 4.4 33 68-102 5-38 (299)
170 1dxy_A D-2-hydroxyisocaproate 88.4 0.37 1.3E-05 47.2 4.5 32 68-102 145-176 (333)
171 3sc6_A DTDP-4-dehydrorhamnose 88.3 0.4 1.4E-05 44.2 4.5 33 66-101 3-36 (287)
172 1q0q_A 1-deoxy-D-xylulose 5-ph 88.3 0.6 2.1E-05 47.2 6.0 44 66-111 8-52 (406)
173 3r3j_A Glutamate dehydrogenase 88.3 0.74 2.5E-05 47.3 6.8 103 68-188 239-352 (456)
174 3gg9_A D-3-phosphoglycerate de 88.3 0.38 1.3E-05 47.7 4.5 32 68-102 160-191 (352)
175 3gt0_A Pyrroline-5-carboxylate 88.2 0.35 1.2E-05 44.5 4.0 25 67-91 1-25 (247)
176 2g76_A 3-PGDH, D-3-phosphoglyc 88.2 0.41 1.4E-05 47.1 4.6 32 68-102 165-196 (335)
177 3jtm_A Formate dehydrogenase, 88.0 0.38 1.3E-05 47.7 4.2 32 68-102 164-195 (351)
178 3aoe_E Glutamate dehydrogenase 87.7 1 3.5E-05 45.8 7.4 33 68-103 218-250 (419)
179 3l4b_C TRKA K+ channel protien 87.7 0.36 1.2E-05 43.5 3.6 31 69-102 1-31 (218)
180 1gdh_A D-glycerate dehydrogena 87.7 0.46 1.6E-05 46.2 4.6 32 68-102 146-177 (320)
181 4e5n_A Thermostable phosphite 87.7 0.35 1.2E-05 47.4 3.8 32 68-102 145-176 (330)
182 4hy3_A Phosphoglycerate oxidor 87.6 0.4 1.4E-05 47.8 4.2 32 68-102 176-207 (365)
183 3gvx_A Glycerate dehydrogenase 87.6 0.36 1.2E-05 46.6 3.8 32 68-102 122-153 (290)
184 1mx3_A CTBP1, C-terminal bindi 87.6 0.46 1.6E-05 46.9 4.6 32 68-102 168-199 (347)
185 4dgs_A Dehydrogenase; structur 87.5 0.47 1.6E-05 46.8 4.6 31 68-101 171-201 (340)
186 2zcu_A Uncharacterized oxidore 87.4 1.5 5.2E-05 40.0 7.8 32 70-102 1-33 (286)
187 2cuk_A Glycerate dehydrogenase 87.3 0.48 1.7E-05 45.9 4.5 31 68-101 144-174 (311)
188 1vm6_A DHPR, dihydrodipicolina 87.2 0.94 3.2E-05 42.5 6.2 161 68-309 12-176 (228)
189 2ew2_A 2-dehydropantoate 2-red 87.2 0.51 1.7E-05 44.2 4.5 32 67-101 2-33 (316)
190 1gtm_A Glutamate dehydrogenase 87.2 0.52 1.8E-05 47.9 4.8 33 68-103 212-245 (419)
191 1ur5_A Malate dehydrogenase; o 87.2 0.58 2E-05 45.1 5.0 34 67-103 1-34 (309)
192 2g1u_A Hypothetical protein TM 87.2 0.64 2.2E-05 39.5 4.8 32 68-102 19-50 (155)
193 1xgk_A Nitrogen metabolite rep 87.1 0.81 2.8E-05 44.4 6.0 32 68-102 5-37 (352)
194 1wwk_A Phosphoglycerate dehydr 86.9 0.51 1.8E-05 45.6 4.5 32 68-102 142-173 (307)
195 4id9_A Short-chain dehydrogena 86.8 3.2 0.00011 39.2 10.0 32 68-102 19-51 (347)
196 1j4a_A D-LDH, D-lactate dehydr 86.7 0.53 1.8E-05 46.0 4.5 32 68-102 146-177 (333)
197 2ekl_A D-3-phosphoglycerate de 86.7 0.55 1.9E-05 45.5 4.5 32 68-102 142-173 (313)
198 2yv1_A Succinyl-COA ligase [AD 86.6 0.82 2.8E-05 44.0 5.7 86 68-188 13-100 (294)
199 3oet_A Erythronate-4-phosphate 86.5 0.54 1.9E-05 47.2 4.5 31 68-101 119-149 (381)
200 2vns_A Metalloreductase steap3 86.4 0.59 2E-05 42.3 4.3 33 67-102 27-59 (215)
201 2o4c_A Erythronate-4-phosphate 86.4 0.56 1.9E-05 47.0 4.5 31 68-101 116-146 (380)
202 3g0o_A 3-hydroxyisobutyrate de 86.3 0.6 2E-05 44.4 4.5 32 67-101 6-37 (303)
203 2x0j_A Malate dehydrogenase; o 86.3 1.7 5.8E-05 42.0 7.7 23 69-91 1-23 (294)
204 2w2k_A D-mandelate dehydrogena 86.2 0.61 2.1E-05 45.9 4.6 32 68-102 163-195 (348)
205 1c1d_A L-phenylalanine dehydro 86.2 0.86 2.9E-05 45.3 5.7 31 69-103 176-206 (355)
206 3aog_A Glutamate dehydrogenase 86.2 2.1 7E-05 43.9 8.6 33 68-103 235-267 (440)
207 4huj_A Uncharacterized protein 86.1 0.44 1.5E-05 43.2 3.4 32 68-102 23-54 (220)
208 1sc6_A PGDH, D-3-phosphoglycer 86.0 0.59 2E-05 47.1 4.5 31 68-101 145-175 (404)
209 3k6j_A Protein F01G10.3, confi 85.9 0.45 1.5E-05 48.9 3.6 30 69-101 55-84 (460)
210 3c85_A Putative glutathione-re 85.9 0.53 1.8E-05 41.0 3.6 32 68-102 39-71 (183)
211 2gcg_A Glyoxylate reductase/hy 85.8 0.58 2E-05 45.6 4.2 32 68-102 155-186 (330)
212 2yv2_A Succinyl-COA synthetase 85.8 1.2 4.2E-05 42.8 6.5 88 68-190 13-104 (297)
213 1v9l_A Glutamate dehydrogenase 85.8 1.7 5.7E-05 44.3 7.7 33 68-103 210-242 (421)
214 2dbq_A Glyoxylate reductase; D 85.6 0.66 2.3E-05 45.3 4.5 32 68-102 150-181 (334)
215 4fcc_A Glutamate dehydrogenase 85.6 1.2 4E-05 45.8 6.5 100 68-185 235-345 (450)
216 3ba1_A HPPR, hydroxyphenylpyru 85.5 0.6 2.1E-05 45.8 4.1 31 68-101 164-194 (333)
217 2hjr_A Malate dehydrogenase; m 85.5 2 6.9E-05 41.7 7.9 33 67-102 13-45 (328)
218 4h7p_A Malate dehydrogenase; s 85.4 1.2 4.1E-05 44.0 6.3 27 64-90 19-47 (345)
219 2nac_A NAD-dependent formate d 85.3 0.62 2.1E-05 46.9 4.2 32 68-102 191-222 (393)
220 2d0i_A Dehydrogenase; structur 85.3 0.64 2.2E-05 45.4 4.2 32 68-102 146-177 (333)
221 3qha_A Putative oxidoreductase 84.9 0.55 1.9E-05 44.6 3.5 31 68-101 15-45 (296)
222 2wtb_A MFP2, fatty acid multif 84.9 1.5 5E-05 47.5 7.2 30 69-101 313-342 (725)
223 3d4o_A Dipicolinate synthase s 84.2 0.93 3.2E-05 43.1 4.7 32 68-102 155-186 (293)
224 1yb4_A Tartronic semialdehyde 84.2 0.57 1.9E-05 43.8 3.2 30 69-101 4-33 (295)
225 2v6b_A L-LDH, L-lactate dehydr 84.0 0.88 3E-05 43.7 4.5 29 69-100 1-31 (304)
226 3k5p_A D-3-phosphoglycerate de 84.0 0.83 2.8E-05 46.4 4.5 31 68-101 156-186 (416)
227 2ahr_A Putative pyrroline carb 83.9 0.86 2.9E-05 41.9 4.2 29 69-100 4-32 (259)
228 3ew7_A LMO0794 protein; Q8Y8U8 83.9 1.1 3.7E-05 39.3 4.7 31 69-102 1-32 (221)
229 3l9w_A Glutathione-regulated p 83.9 0.79 2.7E-05 46.2 4.3 37 69-110 5-41 (413)
230 3hwr_A 2-dehydropantoate 2-red 83.8 2.6 8.9E-05 40.3 7.8 31 67-100 18-48 (318)
231 3gg2_A Sugar dehydrogenase, UD 83.8 0.85 2.9E-05 46.5 4.5 41 67-112 1-41 (450)
232 3two_A Mannitol dehydrogenase; 83.8 1.7 5.9E-05 41.8 6.5 82 69-183 178-259 (348)
233 2j6i_A Formate dehydrogenase; 83.7 0.72 2.5E-05 45.7 3.8 31 68-101 164-195 (364)
234 3h2s_A Putative NADH-flavin re 83.4 1.1 3.9E-05 39.4 4.7 31 69-102 1-32 (224)
235 2rir_A Dipicolinate synthase, 83.3 1.1 3.6E-05 42.8 4.7 32 68-102 157-188 (300)
236 3cky_A 2-hydroxymethyl glutara 83.3 0.92 3.1E-05 42.5 4.2 31 68-101 4-34 (301)
237 3dtt_A NADP oxidoreductase; st 83.2 1.1 3.9E-05 41.2 4.8 32 67-101 18-49 (245)
238 3dfu_A Uncharacterized protein 83.1 0.38 1.3E-05 45.1 1.5 33 67-102 5-37 (232)
239 4g65_A TRK system potassium up 82.8 1.1 3.7E-05 45.8 4.8 40 68-112 3-42 (461)
240 2hmt_A YUAA protein; RCK, KTN, 82.8 0.96 3.3E-05 36.8 3.7 30 70-102 8-37 (144)
241 4dll_A 2-hydroxy-3-oxopropiona 82.7 1 3.5E-05 43.3 4.4 31 68-101 31-61 (320)
242 1yqd_A Sinapyl alcohol dehydro 82.6 1.1 3.8E-05 43.7 4.7 31 69-102 189-219 (366)
243 3pef_A 6-phosphogluconate dehy 82.4 1.1 3.9E-05 41.9 4.5 30 69-101 2-31 (287)
244 3ldh_A Lactate dehydrogenase; 82.3 2.4 8.2E-05 41.7 6.9 23 69-91 22-44 (330)
245 2f1k_A Prephenate dehydrogenas 82.2 1.2 4E-05 41.4 4.5 30 69-101 1-30 (279)
246 4b4o_A Epimerase family protei 82.2 1.3 4.3E-05 41.3 4.7 31 69-102 1-32 (298)
247 1jay_A Coenzyme F420H2:NADP+ o 82.0 1.4 4.9E-05 38.9 4.8 31 69-102 1-32 (212)
248 2bka_A CC3, TAT-interacting pr 82.0 2.1 7.2E-05 38.2 6.0 32 69-102 19-52 (242)
249 3l6d_A Putative oxidoreductase 82.0 1 3.6E-05 42.9 4.1 32 67-101 8-39 (306)
250 3k92_A NAD-GDH, NAD-specific g 81.9 3.7 0.00013 41.8 8.3 33 68-103 221-253 (424)
251 3i83_A 2-dehydropantoate 2-red 81.5 1.3 4.4E-05 42.5 4.5 33 67-102 1-33 (320)
252 3doj_A AT3G25530, dehydrogenas 81.1 1.3 4.5E-05 42.2 4.5 30 69-101 22-51 (310)
253 3h8v_A Ubiquitin-like modifier 81.1 0.77 2.6E-05 44.4 2.8 24 68-91 36-59 (292)
254 2raf_A Putative dinucleotide-b 81.1 1.4 4.9E-05 39.6 4.5 30 68-100 19-48 (209)
255 4e21_A 6-phosphogluconate dehy 80.9 1.3 4.5E-05 43.7 4.5 31 68-101 22-52 (358)
256 2h78_A Hibadh, 3-hydroxyisobut 80.8 1.3 4.3E-05 41.8 4.2 30 69-101 4-33 (302)
257 1leh_A Leucine dehydrogenase; 80.5 4.6 0.00016 40.1 8.3 34 69-107 174-207 (364)
258 4ezb_A Uncharacterized conserv 80.3 1.6 5.4E-05 42.1 4.7 34 66-101 22-55 (317)
259 2pv7_A T-protein [includes: ch 80.1 1.6 5.3E-05 41.5 4.6 32 67-101 20-52 (298)
260 3g79_A NDP-N-acetyl-D-galactos 80.0 3.7 0.00013 42.3 7.6 30 69-101 19-50 (478)
261 2g5c_A Prephenate dehydrogenas 79.9 1.6 5.4E-05 40.6 4.5 32 69-101 2-33 (281)
262 2uyy_A N-PAC protein; long-cha 79.5 1.6 5.4E-05 41.4 4.4 31 68-101 30-60 (316)
263 1ygy_A PGDH, D-3-phosphoglycer 79.5 1.5 5.2E-05 45.5 4.6 32 68-102 142-173 (529)
264 1ldn_A L-lactate dehydrogenase 79.4 2.6 8.8E-05 40.7 6.0 34 67-101 5-38 (316)
265 2gf2_A Hibadh, 3-hydroxyisobut 79.4 1.3 4.4E-05 41.4 3.7 30 69-101 1-30 (296)
266 1y6j_A L-lactate dehydrogenase 79.3 2.8 9.7E-05 40.5 6.2 24 68-91 7-30 (318)
267 2z2v_A Hypothetical protein PH 79.2 1 3.4E-05 44.6 3.0 92 68-190 16-107 (365)
268 1z82_A Glycerol-3-phosphate de 79.2 1.7 5.6E-05 41.8 4.5 34 66-102 12-45 (335)
269 1bg6_A N-(1-D-carboxylethyl)-L 79.2 1.7 5.7E-05 41.6 4.5 31 68-101 4-34 (359)
270 3mw9_A GDH 1, glutamate dehydr 79.1 9.4 0.00032 39.6 10.3 33 68-103 244-276 (501)
271 1evy_A Glycerol-3-phosphate de 78.9 1.4 4.9E-05 42.7 4.0 32 67-101 13-45 (366)
272 4gbj_A 6-phosphogluconate dehy 78.6 1.4 4.8E-05 42.1 3.8 33 66-101 3-35 (297)
273 3ktd_A Prephenate dehydrogenas 78.6 1.6 5.4E-05 42.9 4.2 37 68-109 8-44 (341)
274 2cvz_A Dehydrogenase, 3-hydrox 78.3 1.5 5E-05 40.7 3.7 29 69-101 2-30 (289)
275 3g17_A Similar to 2-dehydropan 78.2 1.1 3.7E-05 42.4 2.8 32 67-101 1-32 (294)
276 3d64_A Adenosylhomocysteinase; 78.0 1.8 6.1E-05 44.9 4.6 31 68-101 277-307 (494)
277 1ks9_A KPA reductase;, 2-dehyd 78.0 2 6.7E-05 39.6 4.5 31 69-102 1-31 (291)
278 3hn2_A 2-dehydropantoate 2-red 78.0 1.5 5E-05 41.9 3.7 33 67-102 1-33 (312)
279 3gpi_A NAD-dependent epimerase 78.0 1.9 6.4E-05 39.8 4.3 31 69-102 4-34 (286)
280 3r6d_A NAD-dependent epimerase 77.9 2.4 8.1E-05 37.5 4.8 31 69-102 5-38 (221)
281 3nep_X Malate dehydrogenase; h 77.9 1.7 5.7E-05 42.3 4.1 23 69-91 1-23 (314)
282 2yjz_A Metalloreductase steap4 79.1 0.46 1.6E-05 42.9 0.0 32 67-101 18-49 (201)
283 2a35_A Hypothetical protein PA 77.4 1.6 5.6E-05 38.0 3.6 33 67-101 4-38 (215)
284 2ydy_A Methionine adenosyltran 77.3 2.2 7.6E-05 39.7 4.7 32 67-101 1-33 (315)
285 2axq_A Saccharopine dehydrogen 77.1 2 6.8E-05 44.0 4.6 94 69-189 24-117 (467)
286 1ff9_A Saccharopine reductase; 77.0 2.9 9.9E-05 42.5 5.7 30 69-101 4-33 (450)
287 3vps_A TUNA, NAD-dependent epi 77.0 2 6.9E-05 39.8 4.3 33 67-102 6-39 (321)
288 1uuf_A YAHK, zinc-type alcohol 76.8 1.8 6.2E-05 42.3 4.0 31 69-102 196-226 (369)
289 3au8_A 1-deoxy-D-xylulose 5-ph 76.6 2.7 9.3E-05 43.2 5.3 42 69-111 78-123 (488)
290 3dfz_A SIRC, precorrin-2 dehyd 76.0 5.8 0.0002 36.7 7.0 31 69-102 32-62 (223)
291 1e6u_A GDP-fucose synthetase; 75.8 2.8 9.7E-05 39.0 5.0 31 68-101 3-34 (321)
292 2i76_A Hypothetical protein; N 75.8 0.75 2.6E-05 43.2 0.9 23 67-89 1-23 (276)
293 3oj0_A Glutr, glutamyl-tRNA re 75.7 1.3 4.3E-05 37.1 2.3 31 68-102 21-51 (144)
294 2iz1_A 6-phosphogluconate dehy 75.6 2 7E-05 43.8 4.2 31 68-101 5-35 (474)
295 3pdu_A 3-hydroxyisobutyrate de 75.5 1.6 5.3E-05 41.0 3.0 30 69-101 2-31 (287)
296 1v8b_A Adenosylhomocysteinase; 75.2 1.9 6.4E-05 44.6 3.8 31 68-101 257-287 (479)
297 3qsg_A NAD-binding phosphogluc 75.0 2 6.9E-05 41.1 3.8 31 68-101 24-55 (312)
298 3n58_A Adenosylhomocysteinase; 74.9 2.4 8.3E-05 43.6 4.5 30 69-101 248-277 (464)
299 3h9u_A Adenosylhomocysteinase; 74.9 2.4 8.3E-05 43.3 4.5 31 68-101 211-241 (436)
300 3eag_A UDP-N-acetylmuramate:L- 74.4 11 0.00038 36.1 8.9 89 69-189 5-95 (326)
301 1np3_A Ketol-acid reductoisome 74.1 2.4 8.2E-05 41.2 4.1 31 69-102 17-47 (338)
302 1t2d_A LDH-P, L-lactate dehydr 74.1 4.3 0.00015 39.3 5.9 32 69-103 5-36 (322)
303 3c7a_A Octopine dehydrogenase; 74.0 2.6 8.8E-05 41.5 4.3 32 67-101 1-33 (404)
304 2qyt_A 2-dehydropantoate 2-red 73.9 2 6.7E-05 40.3 3.3 35 65-101 5-44 (317)
305 1ek6_A UDP-galactose 4-epimera 73.4 3 0.0001 39.3 4.5 33 67-102 1-34 (348)
306 2yy7_A L-threonine dehydrogena 73.3 2.1 7.2E-05 39.6 3.3 35 67-102 1-36 (312)
307 3tri_A Pyrroline-5-carboxylate 73.2 2.6 8.8E-05 39.8 3.9 24 68-91 3-26 (280)
308 3kkj_A Amine oxidase, flavin-c 72.4 3.3 0.00011 35.2 4.1 33 67-102 1-33 (336)
309 2zyd_A 6-phosphogluconate dehy 72.3 2.7 9.4E-05 43.0 4.2 32 68-102 15-46 (480)
310 3jv7_A ADH-A; dehydrogenase, n 72.0 3.3 0.00011 39.6 4.5 32 69-102 173-204 (345)
311 1txg_A Glycerol-3-phosphate de 71.8 2.8 9.5E-05 39.7 3.9 30 69-101 1-30 (335)
312 3ruf_A WBGU; rossmann fold, UD 71.8 3.9 0.00013 38.6 4.9 32 68-102 25-57 (351)
313 2pgd_A 6-phosphogluconate dehy 71.8 2.8 9.5E-05 42.9 4.1 31 69-102 3-33 (482)
314 1vl0_A DTDP-4-dehydrorhamnose 71.7 4.7 0.00016 37.0 5.3 31 68-101 12-43 (292)
315 1oju_A MDH, malate dehydrogena 71.7 4.6 0.00016 38.8 5.4 23 69-91 1-23 (294)
316 3uog_A Alcohol dehydrogenase; 71.5 6.2 0.00021 38.2 6.4 30 69-101 191-220 (363)
317 3ghy_A Ketopantoate reductase 71.0 3.2 0.00011 39.9 4.1 30 69-101 4-33 (335)
318 1f0y_A HCDH, L-3-hydroxyacyl-C 70.5 4.2 0.00014 38.3 4.8 30 69-101 16-45 (302)
319 2aef_A Calcium-gated potassium 70.4 2.4 8.3E-05 38.3 2.9 31 67-101 8-38 (234)
320 1pgj_A 6PGDH, 6-PGDH, 6-phosph 70.4 3.1 0.00011 42.6 4.0 31 69-102 2-32 (478)
321 2dq4_A L-threonine 3-dehydroge 70.4 3.1 0.00011 39.9 3.9 30 69-101 166-196 (343)
322 2p4q_A 6-phosphogluconate dehy 70.4 3.1 0.00011 42.9 4.1 34 66-102 8-41 (497)
323 4aj2_A L-lactate dehydrogenase 70.3 6.8 0.00023 38.3 6.3 24 68-91 19-42 (331)
324 3gvp_A Adenosylhomocysteinase 70.3 3.6 0.00012 42.0 4.5 30 69-101 221-250 (435)
325 4g65_A TRK system potassium up 70.1 3.1 0.00011 42.3 4.0 93 69-188 236-331 (461)
326 3uko_A Alcohol dehydrogenase c 70.1 4.6 0.00016 39.3 5.1 30 69-101 195-225 (378)
327 1mv8_A GMD, GDP-mannose 6-dehy 69.7 3.4 0.00012 41.4 4.2 36 69-109 1-36 (436)
328 4ej6_A Putative zinc-binding d 69.6 2.7 9.3E-05 41.0 3.3 30 69-101 184-214 (370)
329 3ip1_A Alcohol dehydrogenase, 69.6 6.5 0.00022 38.7 6.1 30 69-101 215-245 (404)
330 2cf5_A Atccad5, CAD, cinnamyl 69.6 2.7 9.1E-05 40.7 3.2 31 69-102 182-212 (357)
331 3m6i_A L-arabinitol 4-dehydrog 69.6 3.4 0.00012 39.9 4.0 30 69-101 181-211 (363)
332 3slg_A PBGP3 protein; structur 69.3 3.7 0.00013 39.2 4.2 33 68-102 24-57 (372)
333 4gwg_A 6-phosphogluconate dehy 69.2 3.4 0.00012 42.6 4.1 32 68-102 4-35 (484)
334 2o3j_A UDP-glucose 6-dehydroge 69.0 3.3 0.00011 42.3 4.0 42 67-111 8-49 (481)
335 3obb_A Probable 3-hydroxyisobu 68.7 4.1 0.00014 39.1 4.3 40 67-112 3-42 (300)
336 1xq6_A Unknown protein; struct 68.4 5.8 0.0002 35.1 5.0 34 68-102 4-38 (253)
337 2d4a_B Malate dehydrogenase; a 68.3 4.7 0.00016 38.8 4.6 22 70-91 1-22 (308)
338 4e12_A Diketoreductase; oxidor 68.2 4.6 0.00016 37.9 4.5 30 69-101 5-34 (283)
339 2q3e_A UDP-glucose 6-dehydroge 68.2 3.2 0.00011 42.1 3.6 32 69-101 6-37 (467)
340 3orq_A N5-carboxyaminoimidazol 68.0 6.3 0.00021 38.5 5.6 32 68-102 12-43 (377)
341 3fpc_A NADP-dependent alcohol 67.9 3.3 0.00011 39.9 3.4 30 69-101 168-198 (352)
342 1xa0_A Putative NADPH dependen 67.9 9.2 0.00032 36.1 6.6 30 70-102 152-182 (328)
343 1t2a_A GDP-mannose 4,6 dehydra 67.4 5.2 0.00018 38.3 4.7 34 66-102 22-56 (375)
344 4dvj_A Putative zinc-dependent 67.0 6.6 0.00023 38.1 5.5 31 69-102 173-205 (363)
345 1n2s_A DTDP-4-, DTDP-glucose o 67.0 5.6 0.00019 36.5 4.7 30 69-102 1-31 (299)
346 2rcy_A Pyrroline carboxylate r 66.9 3.2 0.00011 37.9 3.0 23 68-90 4-26 (262)
347 3nkl_A UDP-D-quinovosamine 4-d 66.9 7.2 0.00025 32.0 5.0 33 68-102 4-36 (141)
348 3st7_A Capsular polysaccharide 66.8 4.6 0.00016 38.7 4.2 44 69-114 1-45 (369)
349 3zwc_A Peroxisomal bifunctiona 66.3 7 0.00024 42.4 6.0 147 69-238 317-487 (742)
350 2rh8_A Anthocyanidin reductase 66.2 5.4 0.00019 37.4 4.6 33 66-101 7-40 (338)
351 1pl8_A Human sorbitol dehydrog 66.2 7.6 0.00026 37.4 5.7 30 69-101 173-203 (356)
352 2d8a_A PH0655, probable L-thre 66.1 3.5 0.00012 39.6 3.3 30 69-101 169-199 (348)
353 1e3j_A NADP(H)-dependent ketos 65.8 14 0.00048 35.4 7.5 30 69-101 170-199 (352)
354 1vj0_A Alcohol dehydrogenase, 65.6 5.2 0.00018 39.1 4.4 31 69-101 197-227 (380)
355 1rpn_A GDP-mannose 4,6-dehydra 65.6 6 0.00021 36.9 4.7 33 67-102 13-46 (335)
356 3goh_A Alcohol dehydrogenase, 65.6 4.3 0.00015 38.3 3.7 30 69-101 144-173 (315)
357 3phh_A Shikimate dehydrogenase 65.5 35 0.0012 32.3 10.0 31 69-102 119-149 (269)
358 3ay3_A NAD-dependent epimerase 65.4 2.5 8.6E-05 38.5 2.0 32 67-101 1-33 (267)
359 2vhw_A Alanine dehydrogenase; 65.2 5.8 0.0002 39.1 4.7 32 68-102 168-199 (377)
360 3s2e_A Zinc-containing alcohol 65.2 3.7 0.00013 39.2 3.2 31 69-102 168-198 (340)
361 1n7h_A GDP-D-mannose-4,6-dehyd 65.1 6.1 0.00021 37.9 4.7 33 67-102 27-60 (381)
362 3ko8_A NAD-dependent epimerase 64.6 6.1 0.00021 36.5 4.5 31 69-102 1-32 (312)
363 1pjq_A CYSG, siroheme synthase 64.4 21 0.00072 36.1 8.8 94 69-192 13-107 (457)
364 2fp4_A Succinyl-COA ligase [GD 64.3 8.4 0.00029 37.1 5.6 85 69-188 14-101 (305)
365 3krt_A Crotonyl COA reductase; 64.2 6.9 0.00024 39.2 5.1 39 69-112 230-269 (456)
366 1yqg_A Pyrroline-5-carboxylate 64.1 4 0.00014 37.3 3.1 31 69-101 1-31 (263)
367 1piw_A Hypothetical zinc-type 63.9 4.3 0.00015 39.2 3.4 31 69-102 181-211 (360)
368 3q2o_A Phosphoribosylaminoimid 63.8 7.7 0.00026 37.8 5.3 31 69-102 15-45 (389)
369 2d5c_A AROE, shikimate 5-dehyd 63.0 5.8 0.0002 36.7 4.0 29 70-101 118-146 (263)
370 1p0f_A NADP-dependent alcohol 62.8 7.3 0.00025 37.7 4.9 30 69-101 193-223 (373)
371 1e3i_A Alcohol dehydrogenase, 62.8 7.9 0.00027 37.5 5.1 30 69-101 197-227 (376)
372 3nx4_A Putative oxidoreductase 62.7 8.3 0.00028 36.3 5.1 30 70-102 149-179 (324)
373 2c20_A UDP-glucose 4-epimerase 62.6 7.4 0.00025 36.2 4.7 31 69-102 2-33 (330)
374 2ph5_A Homospermidine synthase 62.6 4.4 0.00015 41.9 3.3 93 68-191 13-114 (480)
375 2b5w_A Glucose dehydrogenase; 62.5 4.7 0.00016 38.9 3.4 31 69-102 174-207 (357)
376 1y7t_A Malate dehydrogenase; N 62.0 6.4 0.00022 37.6 4.3 33 67-101 3-42 (327)
377 1f8f_A Benzyl alcohol dehydrog 62.0 6.6 0.00023 38.0 4.4 30 69-101 192-222 (371)
378 4a2c_A Galactitol-1-phosphate 61.9 4.5 0.00015 38.5 3.1 23 69-91 162-184 (346)
379 2c5a_A GDP-mannose-3', 5'-epim 61.7 7.9 0.00027 37.3 4.9 31 69-102 30-61 (379)
380 3pid_A UDP-glucose 6-dehydroge 61.4 7.1 0.00024 39.7 4.6 38 69-112 37-74 (432)
381 3qwb_A Probable quinone oxidor 61.3 9.7 0.00033 36.1 5.4 31 69-102 150-181 (334)
382 4egb_A DTDP-glucose 4,6-dehydr 61.0 7.3 0.00025 36.6 4.4 34 68-102 24-58 (346)
383 3k96_A Glycerol-3-phosphate de 60.6 7.1 0.00024 38.3 4.3 31 68-101 29-59 (356)
384 2y0c_A BCEC, UDP-glucose dehyd 60.3 7.3 0.00025 39.8 4.5 40 68-112 8-47 (478)
385 3gqv_A Enoyl reductase; medium 60.3 12 0.00042 36.2 6.0 30 69-101 166-196 (371)
386 1cdo_A Alcohol dehydrogenase; 60.0 9.5 0.00033 36.9 5.1 30 69-101 194-224 (374)
387 2b69_A UDP-glucuronate decarbo 60.0 8.7 0.0003 36.2 4.7 32 68-102 27-59 (343)
388 2cdc_A Glucose dehydrogenase g 59.9 4.5 0.00015 39.2 2.7 31 69-102 182-212 (366)
389 1orr_A CDP-tyvelose-2-epimeras 59.8 8.8 0.0003 35.8 4.7 31 69-102 2-33 (347)
390 1gpj_A Glutamyl-tRNA reductase 59.8 6.3 0.00021 39.2 3.8 31 69-102 168-199 (404)
391 1dlj_A UDP-glucose dehydrogena 59.6 7 0.00024 38.8 4.1 29 69-101 1-29 (402)
392 1x13_A NAD(P) transhydrogenase 59.5 7.7 0.00026 38.7 4.5 31 68-101 172-202 (401)
393 2bll_A Protein YFBG; decarboxy 59.4 9.1 0.00031 35.7 4.7 32 69-102 1-33 (345)
394 2ewd_A Lactate dehydrogenase,; 59.2 7 0.00024 37.3 3.9 30 68-100 4-34 (317)
395 3d7l_A LIN1944 protein; APC893 58.9 9.5 0.00033 32.9 4.5 29 69-101 4-33 (202)
396 1yj8_A Glycerol-3-phosphate de 58.7 5.5 0.00019 38.8 3.2 24 67-90 20-43 (375)
397 1sb8_A WBPP; epimerase, 4-epim 58.5 9.9 0.00034 35.9 4.9 31 69-102 28-59 (352)
398 3oh8_A Nucleoside-diphosphate 58.3 8.9 0.0003 39.0 4.8 31 69-102 148-179 (516)
399 2p5y_A UDP-glucose 4-epimerase 58.1 9.6 0.00033 35.2 4.6 31 69-102 1-32 (311)
400 2izz_A Pyrroline-5-carboxylate 58.0 6 0.0002 37.9 3.2 35 68-102 22-57 (322)
401 4b8w_A GDP-L-fucose synthase; 57.8 7.1 0.00024 35.6 3.6 25 67-91 5-30 (319)
402 2r85_A PURP protein PF1517; AT 57.5 8 0.00027 36.2 4.0 32 67-102 1-32 (334)
403 1l7d_A Nicotinamide nucleotide 57.4 8.9 0.00031 37.8 4.5 31 68-101 172-202 (384)
404 3fbg_A Putative arginate lyase 57.3 7.2 0.00025 37.4 3.7 31 69-102 152-183 (346)
405 4hv4_A UDP-N-acetylmuramate--L 57.1 25 0.00086 35.8 7.9 83 69-183 23-106 (494)
406 2q1w_A Putative nucleotide sug 57.0 11 0.00036 35.5 4.7 31 69-102 22-53 (333)
407 3enk_A UDP-glucose 4-epimerase 56.9 10 0.00036 35.4 4.7 32 68-102 5-37 (341)
408 1oc2_A DTDP-glucose 4,6-dehydr 56.7 8.3 0.00029 36.1 4.0 33 69-102 5-38 (348)
409 2jhf_A Alcohol dehydrogenase E 56.7 7.6 0.00026 37.6 3.8 30 69-101 193-223 (374)
410 3p2y_A Alanine dehydrogenase/p 56.5 7.6 0.00026 38.9 3.8 30 69-101 185-214 (381)
411 3h5n_A MCCB protein; ubiquitin 56.4 9.1 0.00031 37.5 4.3 107 68-183 118-235 (353)
412 2eez_A Alanine dehydrogenase; 56.2 10 0.00036 37.0 4.7 30 69-101 167-196 (369)
413 1a5z_A L-lactate dehydrogenase 55.6 8.3 0.00028 37.0 3.8 30 69-101 1-32 (319)
414 2hk9_A Shikimate dehydrogenase 55.3 8.5 0.00029 36.0 3.7 32 68-102 129-160 (275)
415 2dpo_A L-gulonate 3-dehydrogen 55.0 9.7 0.00033 36.8 4.2 39 69-112 7-45 (319)
416 2dph_A Formaldehyde dismutase; 54.9 14 0.00048 36.1 5.4 30 69-101 187-217 (398)
417 4gx0_A TRKA domain protein; me 54.8 9.6 0.00033 39.2 4.4 31 69-102 349-379 (565)
418 1rjw_A ADH-HT, alcohol dehydro 54.4 8.9 0.00031 36.6 3.8 30 69-101 166-195 (339)
419 1pzg_A LDH, lactate dehydrogen 54.4 10 0.00035 36.7 4.2 33 67-102 8-40 (331)
420 3tqh_A Quinone oxidoreductase; 54.3 15 0.00051 34.7 5.3 30 69-101 154-184 (321)
421 2hun_A 336AA long hypothetical 54.3 11 0.00037 35.2 4.3 33 69-102 4-37 (336)
422 1smk_A Malate dehydrogenase, g 54.1 10 0.00035 36.6 4.2 34 67-101 7-41 (326)
423 4dio_A NAD(P) transhydrogenase 54.0 11 0.00037 38.0 4.5 31 68-101 190-220 (405)
424 3gvi_A Malate dehydrogenase; N 53.9 12 0.00039 36.5 4.5 30 68-100 7-37 (324)
425 1h2b_A Alcohol dehydrogenase; 53.8 18 0.00063 34.7 6.0 30 69-101 188-218 (359)
426 1udb_A Epimerase, UDP-galactos 53.4 12 0.00042 34.9 4.5 30 69-101 1-31 (338)
427 2csu_A 457AA long hypothetical 53.2 33 0.0011 34.7 8.0 82 69-188 9-94 (457)
428 3mwd_B ATP-citrate synthase; A 53.2 18 0.0006 35.5 5.7 96 68-190 10-113 (334)
429 3jyn_A Quinone oxidoreductase; 53.1 6.3 0.00021 37.4 2.4 31 69-102 142-173 (325)
430 3p7m_A Malate dehydrogenase; p 52.7 13 0.00044 36.0 4.6 31 68-101 5-36 (321)
431 1y1p_A ARII, aldehyde reductas 52.7 14 0.00049 34.2 4.9 32 68-102 11-43 (342)
432 2eih_A Alcohol dehydrogenase; 52.6 19 0.00066 34.2 5.8 30 69-101 168-198 (343)
433 2fzw_A Alcohol dehydrogenase c 52.5 6.4 0.00022 38.1 2.4 30 69-101 192-222 (373)
434 4a0s_A Octenoyl-COA reductase/ 52.3 15 0.00051 36.5 5.2 30 69-101 222-252 (447)
435 4gx0_A TRKA domain protein; me 52.1 11 0.00038 38.7 4.3 40 65-109 124-163 (565)
436 2pzm_A Putative nucleotide sug 52.1 13 0.00044 34.9 4.5 32 68-102 20-52 (330)
437 1rkx_A CDP-glucose-4,6-dehydra 52.0 14 0.00048 34.8 4.8 31 69-102 10-41 (357)
438 1i24_A Sulfolipid biosynthesis 51.6 14 0.00048 35.3 4.7 32 68-102 11-43 (404)
439 2pk3_A GDP-6-deoxy-D-LYXO-4-he 51.5 15 0.00051 34.0 4.7 31 69-102 13-44 (321)
440 2jl1_A Triphenylmethane reduct 51.5 8.4 0.00029 35.1 2.9 32 70-102 2-34 (287)
441 1y8q_B Anthracycline-, ubiquit 50.9 12 0.00043 39.9 4.5 103 68-176 17-126 (640)
442 4a9w_A Monooxygenase; baeyer-v 50.9 32 0.0011 31.7 6.9 32 68-102 3-34 (357)
443 4hb9_A Similarities with proba 50.8 14 0.00048 35.0 4.6 30 69-101 2-31 (412)
444 1iow_A DD-ligase, DDLB, D-ALA\ 50.8 14 0.00047 34.1 4.4 33 67-102 1-42 (306)
445 2dkn_A 3-alpha-hydroxysteroid 50.7 16 0.00056 32.3 4.7 30 70-102 3-33 (255)
446 2z1m_A GDP-D-mannose dehydrata 49.9 15 0.00052 34.1 4.5 31 69-102 4-35 (345)
447 3lk7_A UDP-N-acetylmuramoylala 49.8 47 0.0016 33.1 8.5 84 69-183 10-97 (451)
448 3sxp_A ADP-L-glycero-D-mannohe 49.7 17 0.00057 34.5 4.9 32 68-102 10-44 (362)
449 2vn8_A Reticulon-4-interacting 49.7 12 0.00042 36.1 4.0 30 69-101 185-215 (375)
450 1kew_A RMLB;, DTDP-D-glucose 4 49.3 13 0.00044 35.0 4.0 32 69-102 1-33 (361)
451 1x0v_A GPD-C, GPDH-C, glycerol 49.3 10 0.00035 36.1 3.3 23 68-90 8-30 (354)
452 3tl2_A Malate dehydrogenase; c 49.2 16 0.00054 35.3 4.6 29 69-100 9-38 (315)
453 1hyh_A L-hicdh, L-2-hydroxyiso 49.1 12 0.00042 35.4 3.8 32 69-101 2-33 (309)
454 3pqe_A L-LDH, L-lactate dehydr 49.1 12 0.00041 36.3 3.8 32 68-101 5-37 (326)
455 1gy8_A UDP-galactose 4-epimera 48.0 18 0.0006 34.6 4.8 31 69-102 3-35 (397)
456 1zcj_A Peroxisomal bifunctiona 47.4 16 0.00056 36.9 4.6 30 69-101 38-67 (463)
457 3d0o_A L-LDH 1, L-lactate dehy 47.2 14 0.00049 35.4 3.9 24 68-91 6-29 (317)
458 2i99_A MU-crystallin homolog; 47.1 13 0.00046 35.3 3.7 23 68-90 135-157 (312)
459 1kjq_A GART 2, phosphoribosylg 47.0 21 0.00071 34.4 5.1 33 67-102 10-42 (391)
460 3vtf_A UDP-glucose 6-dehydroge 47.0 22 0.00075 36.2 5.4 40 66-111 20-59 (444)
461 2dwc_A PH0318, 433AA long hypo 46.6 20 0.00067 35.3 4.9 33 67-102 18-50 (433)
462 2x6t_A ADP-L-glycero-D-manno-h 46.6 17 0.00059 34.3 4.4 32 69-102 47-79 (357)
463 3ado_A Lambda-crystallin; L-gu 46.5 16 0.00055 35.5 4.2 35 69-108 7-41 (319)
464 1lnq_A MTHK channels, potassiu 46.3 11 0.00037 36.0 2.9 29 69-101 116-144 (336)
465 3ihm_A Styrene monooxygenase A 46.1 16 0.00053 36.1 4.2 37 63-102 17-53 (430)
466 1db3_A GDP-mannose 4,6-dehydra 46.0 19 0.00063 34.1 4.5 31 69-102 2-33 (372)
467 1tt7_A YHFP; alcohol dehydroge 45.7 16 0.00056 34.4 4.1 30 70-102 153-183 (330)
468 2ggs_A 273AA long hypothetical 45.7 17 0.00058 32.6 4.0 30 69-102 1-31 (273)
469 3k5i_A Phosphoribosyl-aminoimi 45.1 17 0.00057 35.9 4.2 31 68-101 24-54 (403)
470 1ez4_A Lactate dehydrogenase; 45.0 17 0.00058 35.0 4.1 24 68-91 5-28 (318)
471 2zqz_A L-LDH, L-lactate dehydr 44.5 17 0.00059 35.1 4.1 25 67-91 8-32 (326)
472 1b8p_A Protein (malate dehydro 44.4 19 0.00064 34.6 4.3 24 68-91 5-29 (329)
473 2p4h_X Vestitone reductase; NA 44.1 21 0.00072 32.8 4.5 29 70-101 3-32 (322)
474 3ax6_A Phosphoribosylaminoimid 43.8 23 0.00078 34.1 4.8 31 69-102 2-32 (380)
475 1yvv_A Amine oxidase, flavin-c 43.3 19 0.00066 33.2 4.1 33 67-102 1-33 (336)
476 4ffl_A PYLC; amino acid, biosy 43.1 24 0.00081 33.7 4.8 32 67-102 1-32 (363)
477 3hhp_A Malate dehydrogenase; M 43.1 14 0.00047 35.7 3.1 22 69-90 1-23 (312)
478 1uay_A Type II 3-hydroxyacyl-C 42.8 20 0.0007 31.5 4.0 30 69-101 3-33 (242)
479 4a7p_A UDP-glucose dehydrogena 42.6 21 0.00072 36.2 4.5 32 68-102 8-39 (446)
480 1pjc_A Protein (L-alanine dehy 41.7 24 0.00084 34.2 4.7 31 69-102 168-198 (361)
481 3fbs_A Oxidoreductase; structu 41.3 28 0.00095 31.3 4.8 33 67-102 1-33 (297)
482 1r6d_A TDP-glucose-4,6-dehydra 41.3 29 0.00098 32.3 5.0 33 69-102 1-38 (337)
483 3gms_A Putative NADPH:quinone 41.1 11 0.00038 35.9 2.1 31 69-102 146-177 (340)
484 3vku_A L-LDH, L-lactate dehydr 40.9 19 0.00066 34.9 3.8 24 68-91 9-32 (326)
485 1omo_A Alanine dehydrogenase; 40.8 25 0.00084 33.8 4.5 32 68-102 125-157 (322)
486 3iup_A Putative NADPH:quinone 40.3 19 0.00064 35.1 3.6 30 69-101 172-203 (379)
487 3pi7_A NADH oxidoreductase; gr 40.0 26 0.00088 33.4 4.5 30 70-102 167-197 (349)
488 1eq2_A ADP-L-glycero-D-mannohe 39.9 27 0.00092 31.8 4.5 31 70-102 1-32 (310)
489 3rft_A Uronate dehydrogenase; 39.9 21 0.00071 32.5 3.7 30 69-101 4-34 (267)
490 3fr7_A Putative ketol-acid red 39.8 21 0.00071 37.2 4.0 22 69-90 55-76 (525)
491 2c29_D Dihydroflavonol 4-reduc 39.7 21 0.00073 33.3 3.8 30 69-101 6-36 (337)
492 3ehe_A UDP-glucose 4-epimerase 39.2 22 0.00075 32.8 3.8 30 69-102 2-32 (313)
493 2egg_A AROE, shikimate 5-dehyd 38.5 29 0.00099 32.9 4.6 31 69-102 142-173 (297)
494 1guz_A Malate dehydrogenase; o 38.4 28 0.00097 33.0 4.5 32 69-101 1-32 (310)
495 2v6g_A Progesterone 5-beta-red 38.3 26 0.0009 32.8 4.2 34 69-102 2-38 (364)
496 2ehd_A Oxidoreductase, oxidore 38.2 29 0.00099 30.6 4.3 32 67-101 4-36 (234)
497 1o6z_A MDH, malate dehydrogena 37.6 30 0.001 32.9 4.5 31 69-100 1-32 (303)
498 1mld_A Malate dehydrogenase; o 37.4 30 0.001 33.0 4.6 23 69-91 1-24 (314)
499 2q1s_A Putative nucleotide sug 37.2 31 0.0011 32.9 4.6 32 69-102 33-65 (377)
500 2pbz_A Hypothetical protein; N 37.0 27 0.00092 33.8 4.1 33 67-103 1-33 (320)
No 1
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=9.9e-122 Score=911.05 Aligned_cols=334 Identities=54% Similarity=0.826 Sum_probs=325.3
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
|++||||||||||||+++|++++++.++++||||||+.+++|++|||||||+||+|+++++ .++++|.|||++|+++++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~-~~~~~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVE-VAGDTIDVGYGPIKVHAV 79 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCE-ECSSEEESSSSEEEEECC
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEE-EecCEEEECCEEEEEEee
Confidence 7799999999999999999999873235999999999999999999999999999999999 899999999999999999
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCCCCCeEecCCchhhhHH
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLA 226 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~~~~IISnaSCTTn~La 226 (403)
+||+++||+++|+||||||||.|+++++|+.|+++||||||||+|++|++||||||||++.|+++++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~La 159 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLA 159 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhhH
Confidence 99999999999999999999999999999999999999999999998778999999999999988899999999999999
Q ss_pred HHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEeccccc
Q 015637 227 PFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPN 306 (403)
Q Consensus 227 p~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv~~ 306 (403)
|++|||||+|||++++||||||+||+|+++|.+++|||++|++++||||++||++|+++||||+|+||++|+|+||||++
T Consensus 160 p~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 239 (335)
T 3doc_A 160 PVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPTPN 239 (335)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCCSSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESCSS
T ss_pred HhHHHHHHHcCEEEEEEEeeeeccchhhhhcCccccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEecccc
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCCcc
Q 015637 307 VSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWG 386 (403)
Q Consensus 307 gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE~g 386 (403)
+|++||+++++|++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++|||||||
T Consensus 240 ~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~g 319 (335)
T 3doc_A 240 VSVVDLTFIAKRETTVEEVNNAIREAANGRLKGILGYTDEKLVSHDFNHDSHSSVFHTDQTKVMDGTMVRILSWYDNEWG 319 (335)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECTTHH
T ss_pred ccceEEEEEECCCCCHHHHHHHHHHhhcCCcCCeeEEEcCCeEeeeeCCCCCccccCchhhEEEcCCEEEEEEEEcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhHHHHHHhhc
Q 015637 387 YSQRVVDLADIVANN 401 (403)
Q Consensus 387 ys~r~vdl~~~~~~~ 401 (403)
|||||+||+.||++.
T Consensus 320 ys~r~~dl~~~~~~~ 334 (335)
T 3doc_A 320 FSSRMSDTAVALGKL 334 (335)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhh
Confidence 999999999999763
No 2
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=1.1e-121 Score=912.33 Aligned_cols=332 Identities=55% Similarity=0.879 Sum_probs=312.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||||||||||+++|++++++ +++||||||+.+++|++|||||||+||+|+++++ .++++|.|||++|++++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~--~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~-~~~~~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKES--AFEIVAINASYPSETLAHLIKYDTVHGKFDGTVE-AFEDHLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCS--SSEEEEEECSSCHHHHHHHHHEETTTEECSSCEE-ECSSEEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhCC--CceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEE-EcCCEEEECCEEEEEeecC
Confidence 489999999999999999999875 5999999999999999999999999999999999 8999999999999999999
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCC-CCCeEecCCchhhhHH
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLA 226 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~-~~~IISnaSCTTn~La 226 (403)
||+++||++.|+||||||||.|+++++|+.|+++||||||||+|+++++||||||||++.|++ .++||||||||||||+
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~La 160 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLA 160 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhH
Confidence 999999999999999999999999999999999999999999999877999999999999997 6899999999999999
Q ss_pred HHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEeccccc
Q 015637 227 PFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPN 306 (403)
Q Consensus 227 p~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv~~ 306 (403)
|++|||||+|||++++||||||+|++|+++|.+++|||++|++++||||++||++|+++||||+|+||++|+|+||||++
T Consensus 161 p~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 240 (345)
T 4dib_A 161 PVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPN 240 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECC-------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCSS
T ss_pred HHHHHHHHhcCeEEEEEEeeeeccCCceeccccccccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCcc
Confidence 99999999999999999999999999999999889999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCCcc
Q 015637 307 VSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWG 386 (403)
Q Consensus 307 gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE~g 386 (403)
+|++||+++++|++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++|||||||
T Consensus 241 ~s~~dlt~~lek~~t~eei~~~lk~As~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~G 320 (345)
T 4dib_A 241 VSLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNEWG 320 (345)
T ss_dssp EEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEETTHH
T ss_pred cEEEEEEEEECCCCCHHHHHHHHHHhhcCcccceeeeEcCcEeeeecCCCCcchhhhhhccEEECCCEEEEEEEECCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhHHHHHHhhcC
Q 015637 387 YSQRVVDLADIVANNW 402 (403)
Q Consensus 387 ys~r~vdl~~~~~~~~ 402 (403)
|||||+||+.||++++
T Consensus 321 ys~r~~dl~~~~~~~~ 336 (345)
T 4dib_A 321 YSRRVVDLVTLVVDEL 336 (345)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhc
Confidence 9999999999998764
No 3
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=2.5e-120 Score=900.02 Aligned_cols=328 Identities=50% Similarity=0.796 Sum_probs=320.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC-CChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~-~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
+||||||||||||+++|++++++ +++||||||+ ++++|++|||||||+||+|+++++ .++++|.|||++|++++++
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~--~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~-~~~~~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRP--NVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVS-HDDKHIIVDGKKIATYQER 78 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHST--TCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEE-ECSSEEEETTEEEEEECCS
T ss_pred eEEEEECCCcHHHHHHHHHHhCC--CcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEE-EcCCEEEECCEEEEEEeec
Confidence 79999999999999999999875 5999999996 899999999999999999999999 8999999999999999999
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCCCCCeEecCCchhhhHHH
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAP 227 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~~~~IISnaSCTTn~Lap 227 (403)
||+++||+++|+||||||||.|+++++|+.|+++||||||||+|++| +||||||||++.|+++++||||||||||||+|
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d-~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap 157 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSST-APMFVMGVNEEKYTSDLKIVSNASCTTNCLAP 157 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSS-SCBCCTTTTGGGCCTTCCEEECCCHHHHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCC-CCeEeeccchhhcCccccEEecCcchhhhhHH
Confidence 99999999999999999999999999999999999999999999985 79999999999999888999999999999999
Q ss_pred HHHHHHhhcCeeEEEEeeeeccccchhhhhhc-hhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEeccccc
Q 015637 228 FVKVLDQKFGIIKGTMTTTHSYTGDQRLLDAS-HRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPN 306 (403)
Q Consensus 228 ~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~-~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv~~ 306 (403)
++|||||+|||++++||||||+|++|+++|.+ ++|||++|++++||||++||++|+++||||+|+||++|+|+||||++
T Consensus 158 ~lkvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 237 (332)
T 3pym_A 158 LAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVD 237 (332)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCC
Confidence 99999999999999999999999999999976 58999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCCcc
Q 015637 307 VSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWG 386 (403)
Q Consensus 307 gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE~g 386 (403)
+|++||+++++|++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++|||||||
T Consensus 238 ~s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~g 317 (332)
T 3pym_A 238 VSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDNEYG 317 (332)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECTTHH
T ss_pred cEeeEEEEEECCcCCHHHHHHHHHHhccCccCceeEEEcCCeEeeccCCCCcceEEccccccccCCCEEEEEEEECCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhHHHHHHhh
Q 015637 387 YSQRVVDLADIVAN 400 (403)
Q Consensus 387 ys~r~vdl~~~~~~ 400 (403)
|||||+||+.||++
T Consensus 318 ys~r~~dl~~~~~~ 331 (332)
T 3pym_A 318 YSTRVVDLVEHVAK 331 (332)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhc
Confidence 99999999999975
No 4
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=5.3e-120 Score=899.32 Aligned_cols=330 Identities=47% Similarity=0.798 Sum_probs=321.2
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC-CChhHHhhhccccceecccCc-ceeeecCC-eEEECCEEEEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEA-DVKPVGTD-GISVDGKVIQVV 144 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~-~~~~~~a~ll~yDS~~G~f~~-~v~~~~~~-~l~i~G~~I~v~ 144 (403)
++||||||||||||+++|++++++ +++||||||+ ++++|++|||||||+||+|++ +++ .+++ +|.|||++|+++
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~~--~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~-~~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQSE--DVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIK-IKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCS--SEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEE-EEETTEEEETTEEEEEE
T ss_pred ceEEEEECCChHHHHHHHHHHhCC--CcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEE-EcCCcEEEECCEEEEEE
Confidence 489999999999999999999875 5999999997 899999999999999999999 999 7777 999999999999
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCCCCCeEecCCchhhh
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNC 224 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~~~~IISnaSCTTn~ 224 (403)
+++||+++||++.|+||||||||.|+++++|+.|+++||||||||+|++ |+||||||||++.|+++++|||||||||||
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~-d~p~vV~gVN~~~~~~~~~IISnasCTTn~ 158 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNC 158 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCS-SSCBCCTTTTGGGCCTTCCEEECCCHHHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC-CCCeECCCCCHHHcCCCCcEEecCchhhhh
Confidence 9999999999999999999999999999999999999999999999998 589999999999999888999999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhch-hhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEecc
Q 015637 225 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVP 303 (403)
Q Consensus 225 Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~-~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVP 303 (403)
|+|++|||||+|||++++||||||+|++|+++|.++ +|||++|++++||||++||++|+++||||+|+||++|+|+|||
T Consensus 159 Lap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVP 238 (337)
T 3v1y_O 159 LAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVP 238 (337)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECS
T ss_pred HHHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcC
Confidence 999999999999999999999999999999999765 8999999999999999999999999999999999999999999
Q ss_pred cccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecC
Q 015637 304 TPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDN 383 (403)
Q Consensus 304 v~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDN 383 (403)
|+++|++||+++++|++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||||
T Consensus 239 v~~~s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDN 318 (337)
T 3v1y_O 239 TVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDN 318 (337)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTBTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECT
T ss_pred CCCcEEEEEEEEECCCCcHHHHHHHHHHhccCccCCeeEEEcCCEEeeccCCCCcceEEecccCeEECCCEEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhhHhHHHHHHhhc
Q 015637 384 EWGYSQRVVDLADIVANN 401 (403)
Q Consensus 384 E~gys~r~vdl~~~~~~~ 401 (403)
||||||||+||+.||+++
T Consensus 319 E~gys~r~~dl~~~~~~~ 336 (337)
T 3v1y_O 319 EWGYSNRVIDLIRHMAKT 336 (337)
T ss_dssp THHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHhcc
Confidence 999999999999999875
No 5
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=2e-120 Score=907.43 Aligned_cols=332 Identities=46% Similarity=0.791 Sum_probs=322.5
Q ss_pred CceeEEEEccChhHHHHHHH----HHcCCCCCceEEEEec-CCChhHHhhhccccceecccCcceeee--------cCCe
Q 015637 67 AKLKVAINGFGRIGRNFLRC----WHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPV--------GTDG 133 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~----l~~~~~~~~evvaInd-~~~~~~~a~ll~yDS~~G~f~~~v~~~--------~~~~ 133 (403)
|++||||||||||||+++|+ +++++ +++|||||| +++++|++|||||||+||+|+++++ . ++++
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~~--~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~-~~~~~~~~~~~~~ 77 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLGT--EIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVT-TTKSSPSVAKDDT 77 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBTT--TEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEE-EECSCTTSSSCCE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcCC--CcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEE-ecccccccCCCCE
Confidence 78999999999999999999 56654 599999999 8999999999999999999999999 7 8999
Q ss_pred EEECCEEEEEEe-cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCC-C
Q 015637 134 ISVDGKVIQVVS-NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-D 211 (403)
Q Consensus 134 l~i~G~~I~v~~-~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~-~ 211 (403)
|.|||++|++++ ++||+++||+++|+||||||||.|+++++|+.|+++||||||||+|+++|+||||||||++.|++ .
T Consensus 78 l~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~ 157 (359)
T 3ids_C 78 LVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSE 157 (359)
T ss_dssp EEETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTT
T ss_pred EEECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCC
Confidence 999999999998 89999999999999999999999999999999999999999999999877999999999999997 7
Q ss_pred CCeEecCCchhhhHHHHHHHH-HhhcCeeEEEEeeeeccccchhhhhhch-hhhhhhHhhhcccCCCCCChHHHHHHhcc
Q 015637 212 EPIISNASCTTNCLAPFVKVL-DQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVALVLP 289 (403)
Q Consensus 212 ~~IISnaSCTTn~Lap~lk~L-~~~fGI~~~~~TTiha~tg~q~~~D~~~-~d~r~~r~~a~NIIP~~tGaakav~kVlP 289 (403)
++||||||||||||+|++||| ||+|||++++||||||+|++|+++|.++ +|||++|++++||||++||++|+++||||
T Consensus 158 ~~IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlP 237 (359)
T 3ids_C 158 HHVVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIP 237 (359)
T ss_dssp CSEEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSG
T ss_pred CCEEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhch
Confidence 899999999999999999999 9999999999999999999999999887 79999999999999999999999999999
Q ss_pred ccCCceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccc
Q 015637 290 ALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLV 369 (403)
Q Consensus 290 eL~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~ 369 (403)
+|+||++|+|+||||+++|++||+++++|++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++
T Consensus 238 eL~gkltg~avRVPv~~vs~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~ 317 (359)
T 3ids_C 238 STQGKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSADFINDNRSSIYDSKATLQ 317 (359)
T ss_dssp GGTTSEEEEEEEESCSSCEEEEEEEECSSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEHHHHHH
T ss_pred hhcCceEEEEEEcCCCCcEEEEEEEEECCCCCHHHHHHHHHHhccCccCCceeEecCCEEeeecCCCCcceeEeccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC----CceEEEEEEecCCcchhhhHhHHHHHHhhc
Q 015637 370 MG----DDMVKVIAWYDNEWGYSQRVVDLADIVANN 401 (403)
Q Consensus 370 ~~----~~~~K~~~WyDNE~gys~r~vdl~~~~~~~ 401 (403)
++ ++|+|+++||||||||||||+||+.||+++
T Consensus 318 ~~~~~~~~~vk~~~WYDNE~Gys~r~vdl~~~~~~~ 353 (359)
T 3ids_C 318 NNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMASK 353 (359)
T ss_dssp SSCTTCSSEEEEEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred ecccCCCCEEEEeEEECCCcchHHHHHHHHHHHHhh
Confidence 98 899999999999999999999999999875
No 6
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=4e-119 Score=892.57 Aligned_cols=331 Identities=46% Similarity=0.704 Sum_probs=321.9
Q ss_pred cCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 66 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
.|++||||||||||||+++|++++++ +++||||||+++++|++|||||||+||+|+++++ .++++|.|||++|++++
T Consensus 2 ~m~~kv~INGfGrIGr~v~R~~~~~~--~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~-~~~~~l~inGk~I~v~~ 78 (338)
T 3lvf_P 2 SMAVKVAINGFGRIGRLAFRRIQEVE--GLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVE-VVDGGFRVNGKEVKSFS 78 (338)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTST--TEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEE-EETTEEEETTEEEEEEC
T ss_pred CccEEEEEECCCcHHHHHHHHHHHCC--CceEEEEecCCCHHHHHHHhccCCCCCCcCCeEE-EcCCEEEECCEEEEEEE
Confidence 48899999999999999999999875 5999999999999999999999999999999999 89999999999999999
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCCCCCeEecCCchhhhH
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 225 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~~~~IISnaSCTTn~L 225 (403)
++||+++||+++|+||||||||.|+++++|+.|+++||||||||+|+++++||||||||++.|++.++||||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~L 158 (338)
T 3lvf_P 79 EPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSL 158 (338)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHH
T ss_pred ecccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhh
Confidence 99999999999999999999999999999999999999999999999878999999999999998789999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchh--hhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEecc
Q 015637 226 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHR--DLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVP 303 (403)
Q Consensus 226 ap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~--d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVP 303 (403)
+|++|||||+|||++++||||||+|++|+++|.+++ |||++|++++||||++||++|+++||||+|+||++|+|+|||
T Consensus 159 ap~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVP 238 (338)
T 3lvf_P 159 APVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVP 238 (338)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEES
T ss_pred HHHHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcC
Confidence 999999999999999999999999999999998776 999999999999999999999999999999999999999999
Q ss_pred cccccEEEEEEEEcc-CCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccC---CceEEEEE
Q 015637 304 TPNVSVVDLVVQVSK-KTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMG---DDMVKVIA 379 (403)
Q Consensus 304 v~~gs~~dl~v~~~k-~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~---~~~~K~~~ 379 (403)
|+++|++||+++++| ++++|||+++|+++++|+ |+|+|+|+||+||+||+||||||+.+|++++ ++|+|+++
T Consensus 239 v~~~s~~dlt~~lek~~~t~eei~~~lk~As~g~----l~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~~~~vk~~~ 314 (338)
T 3lvf_P 239 VATGSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAA 314 (338)
T ss_dssp CSSCEEEEEEEEESSSSCCHHHHHHHHHHTCCSS----EEEECSCCCGGGGTTCCCSEEEEGGGCEEEEETTEEEEEEEE
T ss_pred CCceEEEEEEEEEccCCCCHHHHHHHHHHhhcCC----cccccCCEEeEeeCCCCcceEEecccceEecCCCCCEEEEEE
Confidence 999999999999999 999999999999999987 9999999999999999999999999999998 89999999
Q ss_pred EecCCcchhhhHhHHHHHHhhcCC
Q 015637 380 WYDNEWGYSQRVVDLADIVANNWK 403 (403)
Q Consensus 380 WyDNE~gys~r~vdl~~~~~~~~~ 403 (403)
||||||||||||+||+.||+++.+
T Consensus 315 WYDNE~gys~r~~dl~~~~~~~~~ 338 (338)
T 3lvf_P 315 WYDNEMSYTAQLVRTLAYLAELSK 338 (338)
T ss_dssp EECTTHHHHHHHHHHHHHHHHHTC
T ss_pred EECCccchHHHHHHHHHHHHhhcC
Confidence 999999999999999999998753
No 7
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=1.2e-118 Score=892.40 Aligned_cols=329 Identities=45% Similarity=0.762 Sum_probs=320.8
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec-CCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd-~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||||||||||.++|++.+++ ++||+||| +.++++++|||||||+||+|+++++ .+|++|.|||++|+|+++
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~---veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~-~~~~~l~i~Gk~I~v~~e 82 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG---VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVE-FRNGQLVVDNHEISVYQC 82 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEE-EETTEEEETTEEEEEECC
T ss_pred eeEEEEECCChHHHHHHHHHHhCC---CEEEEEeCCCCChhHhcccccccCCCCCCCCcEE-EcCCEEEECCEEEEEEec
Confidence 479999999999999999999874 99999999 5899999999999999999999999 899999999999999999
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCC-CCCeEecCCchhhhH
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCL 225 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~-~~~IISnaSCTTn~L 225 (403)
+||+++||+++|+||||||||.|+++++|+.|+++||||||||+|++ |+||||||||++.|++ +++||||||||||||
T Consensus 83 ~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~-d~plvV~gVN~~~~~~~~~~IISNasCTTn~L 161 (346)
T 3h9e_O 83 KEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP-DAPMFVMGVNENDYNPGSMNIVSNASCTTNCL 161 (346)
T ss_dssp SSGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCS-SSCBCCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred CChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC-CCCeeCcccCHHHcCcccCCEEECCcchhhhH
Confidence 99999999999999999999999999999999999999999999998 4899999999999997 789999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEeeeeccccchhhhhhch-hhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEeccc
Q 015637 226 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPT 304 (403)
Q Consensus 226 ap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~-~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv 304 (403)
+|++|||||+|||++++||||||+|++|+++|.++ +|||++|++++||||++||++|+++||+|+|+||++|+|+||||
T Consensus 162 ap~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv 241 (346)
T 3h9e_O 162 APLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPT 241 (346)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEccc
Confidence 99999999999999999999999999999999764 89999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCC
Q 015637 305 PNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE 384 (403)
Q Consensus 305 ~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE 384 (403)
++||++||+++++|++++|||+++|++|+||+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++|||||
T Consensus 242 ~~~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE 321 (346)
T 3h9e_O 242 PDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNE 321 (346)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTT
T ss_pred ccceeEEEEEEECCcCCHHHHHHHHHHhccCccCCceeEEcCCeEeeccCCCCCceeEcccccEEecCCEEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHhHHHHHHhhc
Q 015637 385 WGYSQRVVDLADIVANN 401 (403)
Q Consensus 385 ~gys~r~vdl~~~~~~~ 401 (403)
|||||||+||+.||+++
T Consensus 322 ~gys~r~~dl~~~~~~~ 338 (346)
T 3h9e_O 322 YGYSHRVVDLLRYMFSR 338 (346)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhh
Confidence 99999999999999875
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=3e-119 Score=898.00 Aligned_cols=331 Identities=53% Similarity=0.878 Sum_probs=321.5
Q ss_pred cCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 66 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
.|++||||||||||||.++|+|++++ |+||+|||+.+++|++|||||||+||+|+++++ +++++|.|||++|++++
T Consensus 19 ~~~~kVaInGfGrIGr~vlr~l~e~~---~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~-~~~~~l~i~Gk~I~v~~ 94 (356)
T 3hja_A 19 PGSMKLAINGFGRIGRNVFKIAFERG---IDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVE-SRDGAIVVDGREIKIIA 94 (356)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT---CEEEEEECSSCHHHHHHHHHEETTTEECSSCEE-EETTEEEETTEEEEEEC
T ss_pred CCCeEEEEECCCHHHHHHHHHHHHCC---CCEEEEeCCCCHHHhhhhhccccCCCCCCCCEE-EcCCEEEECCEEEEEEE
Confidence 35799999999999999999999983 999999999999999999999999999999999 89999999999999999
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCC----HhhHHHHHH-cCCCeEEEcCCCCCCCCeEEeecCccCCCCCCCeEecCCc
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVD----REGAGKHIQ-AGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASC 220 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s----~~~a~~hl~-aGakkVIIsaps~~dvp~vV~gVN~~~~~~~~~IISnaSC 220 (403)
++||+++||++.|+||||||||.|++ +++|+.|++ +||||||||+|++|++||||||||++.|++.++|||||||
T Consensus 95 ~~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSC 174 (356)
T 3hja_A 95 ERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASC 174 (356)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCH
T ss_pred cCChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCcc
Confidence 99999999999999999999999999 999999999 9999999999998778999999999999987899999999
Q ss_pred hhhhHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEE
Q 015637 221 TTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIAL 300 (403)
Q Consensus 221 TTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~av 300 (403)
|||||+|++|+|||+|||++++||||||+||+|+++|.+++|||++|++++||||++||++|+++||||+|+|||+|+|+
T Consensus 175 TTn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~av 254 (356)
T 3hja_A 175 TTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSM 254 (356)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEE
T ss_pred chhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcccccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEE
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred ecccccccEEEEEEEE-ccCCCHHHHHHHHHhccccc-CcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEE
Q 015637 301 RVPTPNVSVVDLVVQV-SKKTFAEEVNAAFRESADNE-LKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVI 378 (403)
Q Consensus 301 RVPv~~gs~~dl~v~~-~k~~s~eeI~~al~~aa~~~-lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~ 378 (403)
||||++||++||+++| +|++++|||+++|+++++|+ |||||+|+|+|+||+||+||+||||||+.+|++++++|+|++
T Consensus 255 RVPv~~~s~~dlt~~l~ek~~t~eeI~~~lk~Aa~g~~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~ 334 (356)
T 3hja_A 255 RVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKIL 334 (356)
T ss_dssp EESCSSCEEEEEEEEESCTTCCHHHHHHHHHHHHHSTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEECSTTEEEEE
T ss_pred EcCCCccEeEEEEEEEccCCCCHHHHHHHHHHHhcCchhccccceecCCeEeeeccCCCCceEEcCcCCEEEcCCEEEEE
Confidence 9999999999999999 99999999999999999999 999999999999999999999999999999999999999999
Q ss_pred EEecCCcchhhhHhHHHHHHhh
Q 015637 379 AWYDNEWGYSQRVVDLADIVAN 400 (403)
Q Consensus 379 ~WyDNE~gys~r~vdl~~~~~~ 400 (403)
+||||||||||||+||+.||++
T Consensus 335 ~WYDNE~Gys~r~vdl~~~~~~ 356 (356)
T 3hja_A 335 SWYDNEFGYSTRVVDLAQKLVK 356 (356)
T ss_dssp EEECTTHHHHHHHHHHHHHHC-
T ss_pred EEECCccchHHHHHHHHHHHhC
Confidence 9999999999999999999864
No 9
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=1.3e-116 Score=877.38 Aligned_cols=331 Identities=52% Similarity=0.837 Sum_probs=320.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCC-CCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRK-DSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~-~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
+||||||||||||+++|+|+++. .++||||+|||+++++|++|||+|||+||+|+++++ .+++.|.++|+.|++++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~-~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVS-VNGSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEE-EETTEEEETTEEEEEECCS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEE-EeCCEEEECCEEEEEEEcC
Confidence 79999999999999999999871 125999999999999999999999999999999999 8899999999999999999
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCC-eEEeecCccCCCCCCCeEecCCchhhhHH
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLA 226 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp-~vV~gVN~~~~~~~~~IISnaSCTTn~La 226 (403)
||+++||++.|+||||||||.|+++++|+.|+++||||||||+|+++|+| |||||||+++|++.++||||||||||||+
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~La 160 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNCLA 160 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHHHH
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999975689 99999999999976789999999999999
Q ss_pred HHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEeccccc
Q 015637 227 PFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPN 306 (403)
Q Consensus 227 p~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv~~ 306 (403)
|++|||||+|||++++||||||+||+|+++|.+++|||++|++++||||++||++|+++||||+|+|||+|+|+||||++
T Consensus 161 p~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~ 240 (335)
T 1obf_O 161 PLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYHEDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPTIN 240 (335)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCCSSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccccccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEeeccc
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCCcc
Q 015637 307 VSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWG 386 (403)
Q Consensus 307 gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE~g 386 (403)
||++||+++|++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++ +++|+|+++|||||||
T Consensus 241 ~s~~dl~v~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~-~~~~vk~~~WyDNE~g 319 (335)
T 1obf_O 241 VSIVDLSFVAKRNTTVEEVNGILKAASEGELKGILDYNTEPLVSVDYNHDPASSTVDASLTKV-SGRLVKVSSWYDNEWG 319 (335)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEE-ETTEEEEEEEECTTHH
T ss_pred eEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCeecccCCceEeeeeCCCCccceeccccccc-cCCEEEEEEEeCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred hhhhHhHHHHHHhhc
Q 015637 387 YSQRVVDLADIVANN 401 (403)
Q Consensus 387 ys~r~vdl~~~~~~~ 401 (403)
|||||+||+.||.++
T Consensus 320 ys~r~~dl~~~~~~~ 334 (335)
T 1obf_O 320 FSNRMLDTTVALMSA 334 (335)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred hHhHHHHHHHHHhcc
Confidence 999999999999765
No 10
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=2.2e-116 Score=877.59 Aligned_cols=330 Identities=47% Similarity=0.782 Sum_probs=321.4
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec-CCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd-~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||||||||||+++|++++++ +||||+||| +.++++++|||+|||+||+|+++++ .+++.|.++|+.|.++++
T Consensus 11 ~~kv~INGfGrIGr~v~ra~~~~~--~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~-~~~~~l~v~Gk~i~v~~~ 87 (345)
T 2b4r_O 11 ATKLGINGFGRIGRLVFRAAFGRK--DIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVT-HADGFLLIGEKKVSVFAE 87 (345)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCS--SEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEE-EETTEEEESSCEEEEECC
T ss_pred heEEEEeCCchHHHHHHHHHhhCC--CcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEE-EcCCEEEECCEEEEEEEc
Confidence 689999999999999999999886 599999999 8899999999999999999999999 889999999999999999
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCCCCCeEecCCchhhhHH
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLA 226 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~~~~IISnaSCTTn~La 226 (403)
+||++++|++.|+||||||||.|+++++++.|+++||||||||+|+++++||||||||++.|++.++||||||||||||+
T Consensus 88 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~La 167 (345)
T 2b4r_O 88 KDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLA 167 (345)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHHH
Confidence 99999999999999999999999999999999999999999999998778999999999999976789999999999999
Q ss_pred HHHHHHHhhcCeeEEEEeeeeccccchhhhhhch---hhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEecc
Q 015637 227 PFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH---RDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVP 303 (403)
Q Consensus 227 p~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~---~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVP 303 (403)
|++|||||+|||++++||||||+||+|+++|.++ +|||++|++++||||++||++|+++||||+|+|||+|+|+|||
T Consensus 168 p~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVP 247 (345)
T 2b4r_O 168 PLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVP 247 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEECS
T ss_pred HHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEec
Confidence 9999999999999999999999999999999876 8999999999999999999999999999999999999999999
Q ss_pred cccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecC
Q 015637 304 TPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDN 383 (403)
Q Consensus 304 v~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDN 383 (403)
|++||++||+++|++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||||
T Consensus 248 v~~gs~~dltv~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~~VS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~WyDN 327 (345)
T 2b4r_O 248 IGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDN 327 (345)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEEEEEEEEETTEEEEEEEECT
T ss_pred ccceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCcccccCCCceEEeeCCCCcccccccccCeEecCCEEEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhhHhHHHHHHhh
Q 015637 384 EWGYSQRVVDLADIVAN 400 (403)
Q Consensus 384 E~gys~r~vdl~~~~~~ 400 (403)
||||||||+||+.||.+
T Consensus 328 E~gys~r~~dl~~~~~~ 344 (345)
T 2b4r_O 328 EWGYSNRVLDLAVHITT 344 (345)
T ss_dssp THHHHHHHHHHHHHHHC
T ss_pred CcchHhHHHHHHHHHhc
Confidence 99999999999999864
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=4.6e-116 Score=875.03 Aligned_cols=331 Identities=57% Similarity=0.929 Sum_probs=320.4
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
|++||||||||||||+++|+|++++ +||||+|||+.+++|++|||+|||+||+|+++++ .+++.|.++|+.|+++++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~~--~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~-~~~~~l~v~Gk~i~v~~~ 77 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGRE--EIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVE-AKDDSIVVDGKEIKVFAQ 77 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTCT--TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEE-ECSSEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhCC--CceEEEEecCCChHHHhhhhhcccccccCCCcEE-EcCCEEEECCEEEEEEEc
Confidence 5689999999999999999999885 5999999999999999999999999999999999 889999999999999999
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCC-eEEeecCccCCCC-CCCeEecCCchhhh
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKP-DEPIISNASCTTNC 224 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp-~vV~gVN~~~~~~-~~~IISnaSCTTn~ 224 (403)
+||++++|++.|+||||||||.|+++++++.|+++||||||||+|++ |+| |||||||+++|++ .++|||||||||||
T Consensus 78 ~dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~-dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~ 156 (342)
T 2ep7_A 78 KDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAK-NPDITVVLGVNEEKYNPKEHNIISNASCTTNC 156 (342)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCB-SCSEECCTTTSGGGCCTTTCCEEECCCHHHHH
T ss_pred CChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCC-CCCceEEcCcCHHHhcccCCeEEECCChHHHH
Confidence 99999999999999999999999999999999999999999999998 489 9999999999997 57899999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEeccc
Q 015637 225 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPT 304 (403)
Q Consensus 225 Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv 304 (403)
|+|++|+|||+|||++++||||||+||+|+++|.+|+|||++|++++||||++||++|+++||||+|+|||+|+|+||||
T Consensus 157 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv 236 (342)
T 2ep7_A 157 LAPCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPHKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPV 236 (342)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHHHcCeeEEEEEEEeecccchhhhcCCcchhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEecc
Confidence 99999999999999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEEEcc-CCCHHHHHHHHHhcccc-------cCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEE
Q 015637 305 PNVSVVDLVVQVSK-KTFAEEVNAAFRESADN-------ELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVK 376 (403)
Q Consensus 305 ~~gs~~dl~v~~~k-~~s~eeI~~al~~aa~~-------~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K 376 (403)
++||++||+++|++ ++++|||+++|+++++| +|||||+|+|+|+||+||+||+||||||+.+|+++ ++|+|
T Consensus 237 ~~~s~~dltv~lek~~~t~eei~~~lk~a~~~~~~~~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~-~~~vk 315 (342)
T 2ep7_A 237 PDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVI-DNLVH 315 (342)
T ss_dssp SSCEEEEEEEEESSCCSCHHHHHHHHHHHHHHHHTSCCGGGTTSEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEE
T ss_pred cceEEEEEEEEEcCCCCCHHHHHHHHHHHhcCCcccccccccccccccCCCeEeeeECCCCccceecccccccc-CCEEE
Confidence 99999999999999 99999999999999999 99999999999999999999999999999999999 88999
Q ss_pred EEEEecCCcchhhhHhHHHHHHhhcC
Q 015637 377 VIAWYDNEWGYSQRVVDLADIVANNW 402 (403)
Q Consensus 377 ~~~WyDNE~gys~r~vdl~~~~~~~~ 402 (403)
+++||||||||||||+||+.||.++|
T Consensus 316 ~~~wyDNE~gys~r~~dl~~~~~~~~ 341 (342)
T 2ep7_A 316 IAAWYDNEWGYSCRLRDLVIYLAERG 341 (342)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHHHC-
T ss_pred EEEEECCCccchhHHHHHHHHHHhcc
Confidence 99999999999999999999998876
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=3.9e-109 Score=824.38 Aligned_cols=328 Identities=53% Similarity=0.853 Sum_probs=318.8
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~d 148 (403)
+||||||||||||+++|+|+++. |+||+|||+.++++++|||+|||+||+|+++++ .+++.|.++|+.|++++++|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~---~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~-~~~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRG---VEVALINDLTDNKTLAHLLKYDSIYHRFPGEVA-YDDQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEE-ECSSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CEEEEEecCCCHHHHhHhhhccccCCCCCceEE-EcCCEEEECCEEEEEEecCC
Confidence 58999999999999999999873 999999999999999999999999999999999 88999999999999998889
Q ss_pred CCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCC-CCCeEecCCchhhhHHH
Q 015637 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAP 227 (403)
Q Consensus 149 p~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap 227 (403)
|++++|++.|+|+||||||.|+++++++.|+++||||||||+|+++++|+||||||++.|++ .++||||||||||||+|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999866899999999999996 47899999999999999
Q ss_pred HHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEecccccc
Q 015637 228 FVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNV 307 (403)
Q Consensus 228 ~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv~~g 307 (403)
++||||++|||+++.||||||+||+|+++|.+|+|||++|++++||||+++|++|+++||||+|+||++++|+||||++|
T Consensus 157 ~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~g 236 (331)
T 2g82_O 157 VMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATG 236 (331)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSSC
T ss_pred HHHHHHHhcCccEEEEEEEeecccccchhccccccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCCE
Confidence 99999999999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCCcch
Q 015637 308 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGY 387 (403)
Q Consensus 308 s~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE~gy 387 (403)
|++||++++++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|+++ ++|+|+++||||||||
T Consensus 237 s~~dl~v~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~-~~~~k~~~wydne~gy 315 (331)
T 2g82_O 237 SISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKAL-GNMVKVFAWYDNEWGY 315 (331)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEEEEEECTTHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHhhcCccCCccCCCCCCeeeeeeCCCCccceecchhcccc-CCEEEEEEEECCCchh
Confidence 999999999999999999999999999999999999999999999999999999999999999 8899999999999999
Q ss_pred hhhHhHHHHHHhhc
Q 015637 388 SQRVVDLADIVANN 401 (403)
Q Consensus 388 s~r~vdl~~~~~~~ 401 (403)
||||+||+.||.++
T Consensus 316 s~r~~d~~~~~~~~ 329 (331)
T 2g82_O 316 ANRVADLVELVLRK 329 (331)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999875
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=5.5e-108 Score=827.74 Aligned_cols=335 Identities=69% Similarity=1.072 Sum_probs=323.2
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
|++||||||||||||.++|+|.++..++|+||+||++.++++++|||+|||+||+|.++++ .+++.|.++|+.|.++++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~-~~~~~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADIS-YDENSITVNGKTMKIVCD 79 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEE-EETTEEEETTEEEEEECC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEE-EeCCeEEECCeEEEEEec
Confidence 5689999999999999999999882135999999999999999999999999999999999 789999999999999999
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCC-eEEeecCccCCCC-CCCeEecCCchhhh
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKP-DEPIISNASCTTNC 224 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp-~vV~gVN~~~~~~-~~~IISnaSCTTn~ 224 (403)
+||++++|++.++|+||||||.|.++++++.|+++||||||||+|+++++| +||||||++.|++ .++|||||||||||
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn~ 159 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNC 159 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHHH
Confidence 999999998889999999999999999999999999999999999986578 9999999999997 37899999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEeccc
Q 015637 225 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPT 304 (403)
Q Consensus 225 Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv 304 (403)
|+|++||||++|||++++|||||++||+|+++|.+|++||++|++++||||++||++|+++||||||+|||+++|+||||
T Consensus 160 lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRVPt 239 (380)
T 2d2i_A 160 LAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPT 239 (380)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHHhcCeeEEEEEEEeeccccchhhccchhhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCC
Q 015637 305 PNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE 384 (403)
Q Consensus 305 ~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE 384 (403)
++||++||++++++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++|||||
T Consensus 240 ~~gs~~dlt~~l~k~~t~eeI~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~wyDNe 319 (380)
T 2d2i_A 240 PNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNE 319 (380)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECTT
T ss_pred CCEEEEEEEEEECCcCCHHHHHHHHHHHhhCCCCCccCCcCCCeeeeeeCCCCcceEEecccCceecCCEEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHhHHHHHHhhcC
Q 015637 385 WGYSQRVVDLADIVANNW 402 (403)
Q Consensus 385 ~gys~r~vdl~~~~~~~~ 402 (403)
|||||||+||+.||.++|
T Consensus 320 ~gys~r~~d~~~~~~~~~ 337 (380)
T 2d2i_A 320 WGYSQRVVDLAELAARKS 337 (380)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred cchHhHHHHHHHHHHhhc
Confidence 999999999999998874
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=4e-107 Score=811.46 Aligned_cols=336 Identities=91% Similarity=1.376 Sum_probs=322.2
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||||||||||+++|+|++++.+++|||+|||+.++++++|||+|||+||+|.++++..+++.|.++|+.|.+++++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 37999999999999999999998223699999999999999999999999999999988733567899999999999999
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCCCCCeEecCCchhhhHHH
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAP 227 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~~~~IISnaSCTTn~Lap 227 (403)
||++++|++.++|+||||||.|.++++++.|+++|||+|++|+|.++++|+||||||++.|++.++||||||||||||+|
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~lap 160 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAP 160 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHHHH
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHHHH
Confidence 99999999889999999999999999999999999999999999875579999999999998667899999999999999
Q ss_pred HHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEecccccc
Q 015637 228 FVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNV 307 (403)
Q Consensus 228 ~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv~~g 307 (403)
++||||++|||+++.||||||+||+|++.|.+|+|||++|++++||||++||++|+++||||||+|||+++|+||||++|
T Consensus 161 ~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~~~g 240 (337)
T 1rm4_O 161 FVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV 240 (337)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESCSSC
T ss_pred HHHHHHHhcCeeEEEEEEEEecCCccchhhcchhhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCCcch
Q 015637 308 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGY 387 (403)
Q Consensus 308 s~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE~gy 387 (403)
|++|+++++++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||||||||
T Consensus 241 s~~dl~~~l~k~~t~eei~~~lk~a~~~~lkgil~y~~~~~vs~d~~~~~~s~i~d~~~~~~~~~~~~k~~~wydne~gy 320 (337)
T 1rm4_O 241 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGY 320 (337)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHHhhCCcCceecCcCCCeeecccCCCCcccccchhccceecCCEEEEEEEECCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhHHHHHHhhcCC
Q 015637 388 SQRVVDLADIVANNWK 403 (403)
Q Consensus 388 s~r~vdl~~~~~~~~~ 403 (403)
||||+||+.||.++|+
T Consensus 321 s~r~~d~~~~~~~~~~ 336 (337)
T 1rm4_O 321 SQRVVDLADIVANKWQ 336 (337)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred hhhHHHHHHHHhhhcc
Confidence 9999999999988753
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=1.3e-106 Score=808.83 Aligned_cols=336 Identities=70% Similarity=1.092 Sum_probs=323.9
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
|++||||||||+|||.++|+|.++..++||||+|||+.++++++|||+|||+||+|+++++ .+++.|.++|+.|.++++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~-~~~~~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADIS-YDENSITVNGKTMKIVCD 79 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEE-EETTEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEE-EcCCeeeecCceEEEEec
Confidence 5689999999999999999999882125999999999999999999999999999999999 788999999999999999
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCC-eEEeecCccCCCC-CCCeEecCCchhhh
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKP-DEPIISNASCTTNC 224 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp-~vV~gVN~~~~~~-~~~IISnaSCTTn~ 224 (403)
+||++++|++.++|+||||||.|.++++++.|+++|+||||||+|+++++| ++|||||++.|++ .++|||||||||||
T Consensus 80 ~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn~ 159 (339)
T 3b1j_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNC 159 (339)
T ss_dssp SCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhhH
Confidence 999999999889999999999999999999999999999999999986578 9999999999997 47899999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEeccc
Q 015637 225 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPT 304 (403)
Q Consensus 225 Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv 304 (403)
|+|++||||++|||++++|||||++||+|+++|.+|+|||++|++++||||++||++++++||+|+|+||++++|+||||
T Consensus 160 lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rVP~ 239 (339)
T 3b1j_A 160 LAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPT 239 (339)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccchhhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCC
Q 015637 305 PNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE 384 (403)
Q Consensus 305 ~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE 384 (403)
++||++++++++++++++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+|+++|||||
T Consensus 240 ~~g~~~dl~v~l~k~~t~eeI~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne 319 (339)
T 3b1j_A 240 PNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNE 319 (339)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHHHHHHSTTBTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTT
T ss_pred CCEEEEEEEEEEcCcCCHHHHHHHHHHhhcCCCCCccCccCCceeehhcCCCCCceEEecccCceecCCEEEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHhHHHHHHhhcCC
Q 015637 385 WGYSQRVVDLADIVANNWK 403 (403)
Q Consensus 385 ~gys~r~vdl~~~~~~~~~ 403 (403)
|||||||+||+.||.++|.
T Consensus 320 ~gys~r~~d~~~~~~~~~~ 338 (339)
T 3b1j_A 320 WGYSQRVVDLAELAARKWA 338 (339)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred cchHhHHHHHHHHHhhhcc
Confidence 9999999999999998763
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=1.5e-105 Score=799.73 Aligned_cols=330 Identities=60% Similarity=0.940 Sum_probs=320.5
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~d 148 (403)
+||||||||||||+++|+|.+++ +++||+||+..++++++|||+|||+||+|+++++ .+++.|.++|+.|.+++++|
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~--~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~-~~~~~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNP--DIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVS-VNGNNLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCT--TEEEEEEECSSCHHHHHHHHHEETTTEECSSCEE-EETTEEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCCC--CeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEE-EccCcEEECCEEEEEEecCC
Confidence 79999999999999999999986 5999999998899999999999999999999999 88999999999999998899
Q ss_pred CCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCC-CCCeEecCCchhhhHHH
Q 015637 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAP 227 (403)
Q Consensus 149 p~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap 227 (403)
|++++|++.++|+||||||.|.++++++.|+++||||||||+|+++++|++|||||++.|++ .++||||||||||||+|
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap 158 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAP 158 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999855799999999999986 37899999999999999
Q ss_pred HHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEecccccc
Q 015637 228 FVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNV 307 (403)
Q Consensus 228 ~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv~~g 307 (403)
++||||++|||+++.||||||+||+|+++|.+|++||++|++++||||++||++++++|+||+|+||++++|+||||++|
T Consensus 159 ~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~g 238 (334)
T 3cmc_O 159 FAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238 (334)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSSC
T ss_pred HHHHHHHhcCceeeeEEEEEeccchhhhccccccccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCCE
Confidence 99999999999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCCcch
Q 015637 308 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGY 387 (403)
Q Consensus 308 s~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE~gy 387 (403)
|++++++++++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||||||||
T Consensus 239 s~~~l~~~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gy 318 (334)
T 3cmc_O 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGY 318 (334)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHHhhCccCCcccCCCCCEeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhHHHHHHhhc
Q 015637 388 SQRVVDLADIVANN 401 (403)
Q Consensus 388 s~r~vdl~~~~~~~ 401 (403)
||||+||+.||.++
T Consensus 319 s~r~~d~~~~~~~~ 332 (334)
T 3cmc_O 319 SHRVVDLAAYIASK 332 (334)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHhc
Confidence 99999999999875
No 17
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=1.6e-104 Score=796.99 Aligned_cols=332 Identities=48% Similarity=0.793 Sum_probs=318.3
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec-CCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd-~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
+++||||||||+|||+++|+|.+++ +||||+||| ..++++++|||+|||+||+|++.++ .+++.|.++|+.|.+++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p--~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~-~~~~~l~v~g~~i~v~~ 92 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERN--DITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVE-VSGKDLCINGKVVKVFQ 92 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCS--SCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEE-ECC-CEEETTEEEEEEC
T ss_pred cceEEEEECCCHHHHHHHHHHHcCC--CeEEEEecCCCCChhHhhhhhcccccCCCCCCcEE-EeCCEEEECCeEEEEEe
Confidence 4589999999999999999999986 599999999 8899999999999999999999998 88999999999999999
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCCC-CCeEecCCchhhh
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNC 224 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~~-~~IISnaSCTTn~ 224 (403)
++||++++|++.++|+||||||.|.++++++.|+++|+||||||+|+++++|++|||||++.|++. .+|||||||||||
T Consensus 93 ~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~ 172 (354)
T 3cps_A 93 AKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNC 172 (354)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHH
Confidence 999999999888999999999999999999999999999999999997668999999999999964 7899999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhch---hhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEe
Q 015637 225 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH---RDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALR 301 (403)
Q Consensus 225 Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~---~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avR 301 (403)
|+|++|||+++|||+++.||||||+||+|+++|.++ ++||++|++++||||+++|++++++|+||+|+|||+++|+|
T Consensus 173 lap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~r 252 (354)
T 3cps_A 173 LAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIR 252 (354)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEE
T ss_pred HHHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEE
Confidence 999999999999999999999999999999999888 89999999999999999999999999999999999999999
Q ss_pred cccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEe
Q 015637 302 VPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWY 381 (403)
Q Consensus 302 VPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~Wy 381 (403)
|||++||++|+++++++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||
T Consensus 253 VP~~~gs~~dl~~~l~k~~t~eeI~~~~k~a~~~~lkgil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wy 332 (354)
T 3cps_A 253 VPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWY 332 (354)
T ss_dssp ESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEE
T ss_pred eccCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCCCCCccCccCCCeeeEEEcCCCcceEEecccCeEecCCEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchhhhHhHHHHHHhhc
Q 015637 382 DNEWGYSQRVVDLADIVANN 401 (403)
Q Consensus 382 DNE~gys~r~vdl~~~~~~~ 401 (403)
||||||||||+||+.||.++
T Consensus 333 dne~gys~r~~d~~~~~~~~ 352 (354)
T 3cps_A 333 DNESGYSNRLVDLAVYVASR 352 (354)
T ss_dssp CTTHHHHHHHHHHHHHHHHT
T ss_pred CCCcchHhHHHHHHHHHHhc
Confidence 99999999999999999875
No 18
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=6.3e-104 Score=787.53 Aligned_cols=328 Identities=56% Similarity=0.872 Sum_probs=318.3
Q ss_pred eeEEEEccChhHHHHHHHHHcC--CCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGR--KDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~--~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
+||||||||+|||+++|+|.++ | +||||+||++.++++++|||+|||+||+|+++++ .+++.|.++|+.|.++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p--~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~-~~~~~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNP--DIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVE-YTENSLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCT--TCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEE-ECSSEEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCC--CeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEE-EcCCEEEECCeEEEEEec
Confidence 5899999999999999999988 5 5999999998899999999999999999999999 889999999999999888
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCC-eEEeecCccCCCCCCCeEecCCchhhhH
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCL 225 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp-~vV~gVN~~~~~~~~~IISnaSCTTn~L 225 (403)
+||++++|++.++|+||||||.|.++++++.|+++|+||||||+|++ ++| ++|||||++.|++.++||||||||||||
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~-d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~l 156 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK-GEDITVVIGCNEDQLKPEHTIISCASCTTNSI 156 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB-SCSEECCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCC-CCCceEEeccCHHHhCCCCcEEECCccHHHHH
Confidence 99999999988999999999999999999999999999999999987 589 9999999999986578999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEecccc
Q 015637 226 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTP 305 (403)
Q Consensus 226 ap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv~ 305 (403)
+|+||||+++|||+++.||||||+||+|+++|.+|++||++|++++||||++||++++++|+||+|+|||+++|+||||+
T Consensus 157 ap~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~ 236 (332)
T 1hdg_O 157 APIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTP 236 (332)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHHhcCeeEeEEEEEEeccchhhhhcCcccccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEcccc
Confidence 99999999999999999999999999999999889999999999999999999999999999999999999999999999
Q ss_pred cccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCCc
Q 015637 306 NVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEW 385 (403)
Q Consensus 306 ~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE~ 385 (403)
+||++++++++++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||||||
T Consensus 237 ~g~l~~l~~~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 316 (332)
T 1hdg_O 237 DGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEY 316 (332)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEETTTEEEEEEEECTTH
T ss_pred CcEEEEEEEEECCCCCHHHHHHHHHHHhhcccCCcccccCCCeeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHhHHHHHHhh
Q 015637 386 GYSQRVVDLADIVAN 400 (403)
Q Consensus 386 gys~r~vdl~~~~~~ 400 (403)
||||||+||+.||.+
T Consensus 317 gys~r~~d~~~~~~~ 331 (332)
T 1hdg_O 317 GYSNRVVDTLELLLK 331 (332)
T ss_dssp HHHHHHHHHHHHGGG
T ss_pred cchhHHHHHHHHHhc
Confidence 999999999999865
No 19
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=1.9e-103 Score=783.58 Aligned_cols=327 Identities=49% Similarity=0.811 Sum_probs=317.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~d 148 (403)
+||||||||+|||+++|+|.+++ +++||+||+..++++++|||+|||+||+|+++++ .+++.|.++|+.|++++++|
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~--~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~-~~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRS--DIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCS--SEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEE-EETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCC--CeEEEEEcCCCChhHHhHhhcccccCCCCCCeEE-EcCCEEEECCEEEEEEEcCC
Confidence 79999999999999999999986 5999999998899999999999999999999999 88999999999999999999
Q ss_pred CCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCCCCCeEecCCchhhhHHHH
Q 015637 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPF 228 (403)
Q Consensus 149 p~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~ 228 (403)
|+++||++.++|+||||||.|.++++++.|+++|+|+|++|+|.++++|++|||||++.|+ .++||||||||||||+|+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~ 157 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPL 157 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHH
Confidence 9999998889999999999999999999999999999999999965689999999999998 578999999999999999
Q ss_pred HHHHHhhcCeeEEEEeeeeccccchhhhhhch-hhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEecccccc
Q 015637 229 VKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNV 307 (403)
Q Consensus 229 lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~-~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv~~g 307 (403)
|||||++|||+++.|||+||+||+|+++|.++ ++||++|++++||||+++|++++++|+||+|+|||+++|+||||++|
T Consensus 158 lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g 237 (330)
T 1gad_O 158 AKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 237 (330)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSSC
T ss_pred HHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccccE
Confidence 99999999999999999999999999999887 78999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCCcch
Q 015637 308 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGY 387 (403)
Q Consensus 308 s~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE~gy 387 (403)
|++++++++++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||||||||
T Consensus 238 ~~~~l~~~l~k~~t~eei~~~~k~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gy 317 (330)
T 1gad_O 238 SVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGY 317 (330)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEETTTCEEEETTEEEEEEEECTTHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHHhcCCCCCEEeeECCceeeeeECCCCcceEEecccCeEecCCEEEEEEEECCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred hhhHhHHHHHHh
Q 015637 388 SQRVVDLADIVA 399 (403)
Q Consensus 388 s~r~vdl~~~~~ 399 (403)
||||+||+.||.
T Consensus 318 s~r~~d~~~~~~ 329 (330)
T 1gad_O 318 SNKVLDLIAHIS 329 (330)
T ss_dssp HHHHHHHHHHTT
T ss_pred hhHHHHHHHHhc
Confidence 999999999985
No 20
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=2.2e-103 Score=785.65 Aligned_cols=332 Identities=44% Similarity=0.728 Sum_probs=309.5
Q ss_pred CceeEEEEccChhHHHHHHHHHc---CCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEE
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHG---RKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~---~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v 143 (403)
|++||||||||+|||.++|+|.+ ++ +|+||+||+..++++++|||+|||+||+|+++++ .+++.|.++|+.|++
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~~--~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~-~~~~~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRRA--EITVVAINELADAAGMAHLLKYDTSHGRFAWEVR-QERDQLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGGG--TEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEE-EETTEEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCCC--CEEEEEEeCCCCHHHHHHHhcccccCCCCCceEE-EcCCeeEECCEEEEE
Confidence 56899999999999999999998 75 4999999998899999999999999999999999 889999999999999
Q ss_pred EecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCC-eEEeecCccCCCCCCCeEecCCchh
Q 015637 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTT 222 (403)
Q Consensus 144 ~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp-~vV~gVN~~~~~~~~~IISnaSCTT 222 (403)
++++||++++|++.++|+||||||.|.++++++.|+++|+||||||+|++.++| ++|||||++.|+...+|||||||||
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCtt 157 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTT 157 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHH
Confidence 988999999998889999999999999999999999999999999999833678 9999999999986568999999999
Q ss_pred hhHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEec
Q 015637 223 NCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRV 302 (403)
Q Consensus 223 n~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRV 302 (403)
|||+|++||||++|||+++.|||+||+||+|+++|.+|+|||++|++++||||++||++++++|+||+|+||++++|+||
T Consensus 158 n~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rV 237 (339)
T 2x5j_O 158 NCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRV 237 (339)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEECCC-----------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEEC
T ss_pred HHHHHHHHHHHHccCcceeeEEEEEeccccccccccccccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEec
Q 015637 303 PTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYD 382 (403)
Q Consensus 303 Pv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyD 382 (403)
||++||++++++++++++++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+|+++|||
T Consensus 238 P~~~g~~~~l~v~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 317 (339)
T 2x5j_O 238 PTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCD 317 (339)
T ss_dssp SSCSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEEEEEEEETTTEEEEEEEEC
T ss_pred cccCcEEEEEEEEECCCCCHHHHHHHHHHHhhcCCCcEEcccCCcccccccCCCCCceEEEcccceeccCCEEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHhHHHHHHhhc
Q 015637 383 NEWGYSQRVVDLADIVANN 401 (403)
Q Consensus 383 NE~gys~r~vdl~~~~~~~ 401 (403)
|||||||||+||+.||.++
T Consensus 318 ne~gys~r~~d~~~~~~~~ 336 (339)
T 2x5j_O 318 NEWGFANRMLDTTLAMATV 336 (339)
T ss_dssp HHHHHHHHHHHHHHHHHCC
T ss_pred CCcccHhHHHHHHHHHhhh
Confidence 9999999999999999765
No 21
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=1.6e-102 Score=778.99 Aligned_cols=331 Identities=47% Similarity=0.798 Sum_probs=318.9
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec-CCChhHHhhhccccceecccC-cceeee-cCCeEEECCEEEEE
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFE-ADVKPV-GTDGISVDGKVIQV 143 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd-~~~~~~~a~ll~yDS~~G~f~-~~v~~~-~~~~l~i~G~~I~v 143 (403)
|++||||||||||||.++|+|.+++ +++||+||| ..++++++|||+|||+||+|+ +.++ . +++.|.++|+.|.+
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~p--~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~-~~~~~~l~~~g~~i~v 78 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQSE--DVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIK-IKDSKTLLLGEKPVTV 78 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCS--SEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEE-ESSSSEEEETTEEEEE
T ss_pred CceEEEEECcCHHHHHHHHHHhCCC--CeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEE-eecCCeeEECCeEEEE
Confidence 5689999999999999999999886 499999999 589999999999999999999 8887 6 78899999999999
Q ss_pred EecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCCCCCeEecCCchhh
Q 015637 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTN 223 (403)
Q Consensus 144 ~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~~~~IISnaSCTTn 223 (403)
++++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++ ++|++|||||++.|++.++||||||||||
T Consensus 79 ~~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~-d~p~~V~gvN~~~~~~~~~iIsnpsCtt~ 157 (337)
T 3e5r_O 79 FGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTN 157 (337)
T ss_dssp ECCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS-SSCBCCTTTTGGGCCTTCCEEECCCHHHH
T ss_pred EecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCC-CCCEEEeccCHHHhCCCCcEEECCChHHH
Confidence 98899999999888999999999999999999999999999999999997 58999999999999866789999999999
Q ss_pred hHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhch-hhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEec
Q 015637 224 CLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRV 302 (403)
Q Consensus 224 ~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~-~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRV 302 (403)
||+|++||||++|||+++.|||+||+||+|+++|.+| ++||++|++++||||+++|++++++|+||+|+||++++|+||
T Consensus 158 ~la~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rV 237 (337)
T 3e5r_O 158 CLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRV 237 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEe
Confidence 9999999999999999999999999999999999887 699999999999999999999999999999999999999999
Q ss_pred ccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEec
Q 015637 303 PTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYD 382 (403)
Q Consensus 303 Pv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyD 382 (403)
||++||++|+++++++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++|||
T Consensus 238 P~~~g~~~~l~~~l~k~~t~eei~~~~~~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 317 (337)
T 3e5r_O 238 PTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYD 317 (337)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEEC
T ss_pred ccCCeEEEEEEEEECCCccHHHHHHHHHHHhhCCCCCcccCCCCCeeeeeecCCCCceEEecccCcEecCCEEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHhHHHHHHhhc
Q 015637 383 NEWGYSQRVVDLADIVANN 401 (403)
Q Consensus 383 NE~gys~r~vdl~~~~~~~ 401 (403)
|||||||||+||+.||.++
T Consensus 318 ne~gys~r~~~~~~~~~~~ 336 (337)
T 3e5r_O 318 NEWGYSNRVIDLIRHMAKT 336 (337)
T ss_dssp TTHHHHHHHHHHHHHHHHC
T ss_pred CCcchHhHHHHHHHHHhcc
Confidence 9999999999999999764
No 22
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=1.2e-101 Score=772.13 Aligned_cols=331 Identities=45% Similarity=0.766 Sum_probs=319.2
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec-CCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd-~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
|++||||||||||||.++|+|.+++ +++||+||| +.++++++||++|||+||+|+++++ .+++.|.++|+.|++++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~~--~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~-~~~~~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNSG--KVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVK-AENGKLVINGNPITIFQ 78 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHC--SSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEE-EETTEEEETTEEEEEEC
T ss_pred CceEEEEEccCHHHHHHHHHHHcCC--CcEEEEecCCCCCHHHHHHHhhcccccCCCCCceE-EcCCeEEECCeEEEEEe
Confidence 5689999999999999999999886 499999999 5899999999999999999999999 88999999999999999
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCCCCCeEecCCchhhhH
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 225 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~~~~IISnaSCTTn~L 225 (403)
++||++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|++ ++|++|||||++.|++.++||||||||||||
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~-~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l 157 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA-DAPMFVMGVNHEKYDNSLKIISNASCTTNCL 157 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS-SSCBCCTTTTGGGCCTTCSEEECCCHHHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCC-CCCeEEeccCHHHhCCCCCEEECCChHHHHH
Confidence 899999999988999999999999999999999999999999999976 4899999999999986678999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEeeeeccccchhhhhhch-hhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEeccc
Q 015637 226 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPT 304 (403)
Q Consensus 226 ap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~-~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVPv 304 (403)
+|++||||++|||+++.|||+|++||+|+++|.++ ++||++|++++||||+++|++++++|+||+|+||++++|+||||
T Consensus 158 ~~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~ 237 (335)
T 1u8f_O 158 APLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPT 237 (335)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEecc
Confidence 99999999999999999999999999999999888 89999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCC
Q 015637 305 PNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE 384 (403)
Q Consensus 305 ~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE 384 (403)
++||++++++++++++++|||+++|+++++|+|||||+|+|+|+||+||+||+||+|||+.+|++++++++|+++|||||
T Consensus 238 ~~g~~~~l~~~l~~~~t~eei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne 317 (335)
T 1u8f_O 238 ANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNE 317 (335)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTT
T ss_pred CCEEEEEEEEEECCCCCHHHHHHHHHHHhhCccCcEEcccCCCcceeeecCCCCceEEeCCCCEEecCCEEEEEEEEcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred cchhhhHhHHHHHHhhc
Q 015637 385 WGYSQRVVDLADIVANN 401 (403)
Q Consensus 385 ~gys~r~vdl~~~~~~~ 401 (403)
|||||||+||+.||.++
T Consensus 318 ~gy~~r~~~~~~~~~~~ 334 (335)
T 1u8f_O 318 FGYSNRVVDLMAHMASK 334 (335)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred chhHhHHHHHHHHHhcc
Confidence 99999999999999764
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.2e-61 Score=481.15 Aligned_cols=241 Identities=18% Similarity=0.258 Sum_probs=217.4
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhcccc--ceeccc--Ccce-eeecCCeEEECCEEE
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYD--STLGIF--EADV-KPVGTDGISVDGKVI 141 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yD--S~~G~f--~~~v-~~~~~~~l~i~G~~I 141 (403)
|++||||||||+|||.++|+|.+++ +|+||+|||+ ++++++||++|| ++||+| ++.+ + .+++.+.++|
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~~--~~evvaV~d~-~~~~~~~l~~~dg~s~~g~~~~~~~v~~-~~~~~l~v~~--- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQD--DMEVIGVTKT-KPDFEARLAVEKGYKLFVAIPDNERVKL-FEDAGIPVEG--- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHSS--SEEEEEEEES-SCSHHHHHHHHTTCCEEESSCCHHHHHH-HHHTTCCCCC---
T ss_pred CceEEEEECCCHHHHHHHHHHHhCC--CceEEEEecC-CHHHHHHHHHhcCCccccccCCCceeec-ccCCeEEECC---
Confidence 5689999999999999999999885 4999999997 599999999999 999999 6666 4 5566677765
Q ss_pred EEEecCCCCCCCCCCcCccEEeeCCCCcCCHhhHH-HHHHcCCCeEEEcCCCCCC-CC-eEEeecCccCCCCCCCeEecC
Q 015637 142 QVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAG-KHIQAGAKKVLITAPGKGD-IP-TYVVGVNADAYKPDEPIISNA 218 (403)
Q Consensus 142 ~v~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~-~hl~aGakkVIIsaps~~d-vp-~vV~gVN~~~~~~~~~IISna 218 (403)
++..+.| ++|+||||||.+.++++++ .|+++| ++||+|+|++++ +| |||||||+++|+. ++||+||
T Consensus 74 ------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn~ 142 (343)
T 2yyy_A 74 ------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRVV 142 (343)
T ss_dssp ------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEEC
T ss_pred ------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc-CCEEecc
Confidence 3444546 7999999999999999996 999999 569999998744 89 9999999999985 7899999
Q ss_pred CchhhhHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCC----CCChHHHHHHhccccCCc
Q 015637 219 SCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT----STGAAKAVALVLPALKGK 294 (403)
Q Consensus 219 SCTTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~----~tGaakav~kVlPeL~gk 294 (403)
|||||||+|+||+||++|||+++.|||||++||. + +++|++++||||+ ++|++|+++||||+|+||
T Consensus 143 sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~-------~---~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~gk 212 (343)
T 2yyy_A 143 SCNTTGLCRILYAINSIADIKKARIVLVRRAADP-------N---DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEGK 212 (343)
T ss_dssp CHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCT-------T---CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTTS
T ss_pred chhhHHHHHHHHHHHHHcCceEEEEEeeeeccCc-------C---cchhhHHhcccCCCCCCCCcchHHHHHhhhccccc
Confidence 9999999999999999999999999999999993 1 5567899999999 999999999999999999
Q ss_pred eeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcccc
Q 015637 295 LNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADN 335 (403)
Q Consensus 295 l~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~ 335 (403)
++|+|+||||++||+++|+++|++++++|||+++|++++..
T Consensus 213 l~~~avRVPv~~gh~~~l~v~l~~~~t~eei~~~l~~a~~v 253 (343)
T 2yyy_A 213 ILTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIKKTPRI 253 (343)
T ss_dssp EEEEEEEESCSSCEEEEEEEEEESCCCHHHHHHHHHHSTTE
T ss_pred eeeEEEEecccceEEEEEEEEECCCCCHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999865
No 24
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2e-49 Score=396.01 Aligned_cols=302 Identities=17% Similarity=0.156 Sum_probs=238.2
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
|++||+|+| ||+|||.++|+|.++..+.++++++++.. ..++.+.++|+.+.+.
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~------------------------~~g~~~~~~g~~i~~~- 59 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE------------------------SAGQRMGFAESSLRVG- 59 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT------------------------TTTCEEEETTEEEECE-
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC------------------------CCCCccccCCcceEEe-
Confidence 468999999 99999999999995533468999888520 1234455777777774
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCC-CCCeEEeecCccCCCCCC--CeEecCCchh
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIPTYVVGVNADAYKPDE--PIISNASCTT 222 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~-dvp~vV~gVN~~~~~~~~--~IISnaSCTT 222 (403)
+.+++. |. ++|+||+|+|.+.+++.++.|+++|+|+|.+|++..+ ++|++|||||++.|+..+ +||+||||+|
T Consensus 60 ~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 135 (340)
T 2hjs_A 60 DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAVA 135 (340)
T ss_dssp EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCHHH
T ss_pred cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCHHH
Confidence 345543 75 8999999999999999999999999987666777543 579999999999998532 7999999999
Q ss_pred hhHHHHHHHHHhhcCeeEEEEeeeeccccchh-hhhhch---hhhhhh---------HhhhcccCCCCC-----C-----
Q 015637 223 NCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQR-LLDASH---RDLRRA---------RAAALNIVPTST-----G----- 279 (403)
Q Consensus 223 n~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~-~~D~~~---~d~r~~---------r~~a~NIIP~~t-----G----- 279 (403)
||++|+|+||+++|||+++.|||+|++||+|+ .+|.++ ++||++ |++++||||+++ |
T Consensus 136 t~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee 215 (340)
T 2hjs_A 136 AELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSAIE 215 (340)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBHHH
T ss_pred HHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccHHH
Confidence 99999999999999999999999999999986 578655 678874 678999999987 7
Q ss_pred --hHHHHHHhccccCCceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCC
Q 015637 280 --AAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSD 357 (403)
Q Consensus 280 --aakav~kVlPeL~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~ 357 (403)
..++++||+|++++|++++|+||||++||++++++++++++++|||+++|++++ +=-++...+-|-...|..|..
T Consensus 216 ~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~~~---~V~v~~~~~~p~~~~~v~g~~ 292 (340)
T 2hjs_A 216 RRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDATK---GIEWVGEGDYPTVVGDALGQD 292 (340)
T ss_dssp HHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHST---TEEECCTTCCCCCCCCCTTSS
T ss_pred HHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCCCCHHHHHHHHhcCC---CcEEeCCCCCCccHHHcCCCC
Confidence 455668899999999999999999999999999999999999999999999754 212222111221111556555
Q ss_pred cceeeeCCCccccCCceEEEEEEecC-CcchhhhHhHHHHHHhhc
Q 015637 358 VSSTVDSSLTLVMGDDMVKVIAWYDN-EWGYSQRVVDLADIVANN 401 (403)
Q Consensus 358 ~s~i~d~~~~~~~~~~~~K~~~WyDN-E~gys~r~vdl~~~~~~~ 401 (403)
+-.|--...... .++.+.+.+|.|| .+|.|-.-+-.+++|..+
T Consensus 293 ~~~vgr~r~~~~-~~~~l~~~~~~DNl~kGAA~~avq~~~l~~~~ 336 (340)
T 2hjs_A 293 ETYVGRVRAGQA-DPCQVNLWIVSDNVRKGAALNAVLLGELLIKH 336 (340)
T ss_dssp CEEEEEEEECSS-CTTEEEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCC-CCCEEEEEEEechHHHHHHHHHHHHHHHHHHh
Confidence 444432222111 3467889999999 999999999888888654
No 25
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=1e-49 Score=396.82 Aligned_cols=293 Identities=20% Similarity=0.273 Sum_probs=232.0
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
||||||| ||+|||.++|+|.++. ++++.+ +++. | .+ .+++.+.++|+.+.++..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~---~~~~~l----------~~~~--s--------~~-~~g~~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARN---FPLSEL----------RLYA--S--------PR-SAGVRLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT---CCCSCC----------EEEE--C--------GG-GSSCEEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CCcEEE----------EEee--c--------cc-cCCCEEEEcCceEEEEeC-
Confidence 5899999 9999999999999664 442222 2221 1 23 567889999999999765
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----CCCCeEEeecCccCCCCCCCeEecCCchhh
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPDEPIISNASCTTN 223 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~dvp~vV~gVN~~~~~~~~~IISnaSCTTn 223 (403)
+|+ +| ++|+||+|+|.+.++++++.|+++|+ +||+++++ +++|++|||||++.|+...+||||||||||
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt 128 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTA 128 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTC--EEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCC--EEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHH
Confidence 565 58 79999999999999999999999999 56766653 368999999999999864679999999999
Q ss_pred hHHHHHHHHHhhcCeeEEEEeeeeccccc------------hhhhhhc-hhhhhhhHhhhcccCCCC--------CChHH
Q 015637 224 CLAPFVKVLDQKFGIIKGTMTTTHSYTGD------------QRLLDAS-HRDLRRARAAALNIVPTS--------TGAAK 282 (403)
Q Consensus 224 ~Lap~lk~L~~~fGI~~~~~TTiha~tg~------------q~~~D~~-~~d~r~~r~~a~NIIP~~--------tGaak 282 (403)
||+|+||||+++|||+++.|||||++||+ |+++|.+ ++++|++|++++||||++ |++++
T Consensus 129 ~~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~ 208 (331)
T 2yv3_A 129 ILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEM 208 (331)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHH
T ss_pred HHHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHH
Confidence 99999999999999999999999999999 7777744 478999999999999998 78776
Q ss_pred HH----HHhc--cccCCceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccC---CCceeecC
Q 015637 283 AV----ALVL--PALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCD---EPLVSVDF 353 (403)
Q Consensus 283 av----~kVl--PeL~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~---~p~VS~D~ 353 (403)
++ +|+| |+| +++++|+|||+++||++++++++++++++|||+++|++++- --++.-.+ -|- ..+.
T Consensus 209 ~i~~e~~kil~~~~l--~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~~~~---v~v~~~~~~~~~p~-~~~~ 282 (331)
T 2yv3_A 209 KVVWETHKIFGDDTI--RISATAVRVPTLRAHAEAVSVEFARPVTPEAAREVLKEAPG---VEVVDEPEAKRYPM-PLTA 282 (331)
T ss_dssp HHHHHHHHHTTCTTC--EEEEECCBCSCSSEEEEEEEEEESSCCCHHHHHHHHTTSTT---CCBCCBTTTTBCCC-HHHH
T ss_pred HHHHHHHHHhCCCCc--eEEEEEEEeccCceEEEEEEEEECCCCCHHHHHHHHHcCCC---eEEEeCCCcCCCCC-hhhc
Confidence 67 8999 887 59999999999999999999999999999999999998542 11221100 111 1245
Q ss_pred CCCCcceeeeCCCccccCCceEEEEEEecCC-cchhhhHhHHHHHHhh
Q 015637 354 RCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYSQRVVDLADIVAN 400 (403)
Q Consensus 354 ~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE-~gys~r~vdl~~~~~~ 400 (403)
.|..+-.|--..... ..++.+.+++|.||- +|.|-.-|-.+++|.+
T Consensus 283 ~g~~~~~igr~~~d~-~~~~~l~~~~~~DNl~kGAAg~AVq~~nl~~~ 329 (331)
T 2yv3_A 283 SGKWDVEVGRIRKSL-AFENGLDFFVVGDQLLKGAALNAVQIAEEWLK 329 (331)
T ss_dssp TTCSSEEEEEEEECS-SSTTEEEEEEEEETTHHHHTTHHHHHHHHHC-
T ss_pred cCCceEEEEEEEECC-CCCCEEEEEEEechHHHHHHHHHHHHHHHHhh
Confidence 555544442111111 024568899999999 8999998888888764
No 26
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=1.8e-48 Score=388.48 Aligned_cols=299 Identities=20% Similarity=0.223 Sum_probs=219.4
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+| ||+|||.++|+|.+++.+++++++|++.. ..|+.+.++|+.+.+. +
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~------------------------~~G~~~~~~~~~i~~~-~ 57 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER------------------------SEGKTYRFNGKTVRVQ-N 57 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT------------------------TTTCEEEETTEEEEEE-E
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC------------------------CCCCceeecCceeEEe-c
Confidence 48999999 99999999999998832359999998520 2244566788887773 4
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----CCCCeEEeecCccCCCCC--CCeEecCCc
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPD--EPIISNASC 220 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~dvp~vV~gVN~~~~~~~--~~IISnaSC 220 (403)
.++. +|. ++|+||+|+|.+.++++++.|+++|+ ++|+++++ +++|++|||||++.|+.. .+|||||||
T Consensus 58 ~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C 131 (336)
T 2r00_A 58 VEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGV--VVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNC 131 (336)
T ss_dssp GGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCH
T ss_pred CChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCC--EEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCCh
Confidence 4554 684 89999999999999999999999999 55655543 368999999999999852 679999999
Q ss_pred hhhhHHHHHHHHHhhcCeeEEEEeeeeccccchh-hhhhchh------------hhhhhHhhhcccCCCCC-----Ch--
Q 015637 221 TTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQR-LLDASHR------------DLRRARAAALNIVPTST-----GA-- 280 (403)
Q Consensus 221 TTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~-~~D~~~~------------d~r~~r~~a~NIIP~~t-----Ga-- 280 (403)
+||||+|+|+||+++|||+++.|||||++||+|+ ++|.+++ +++++|++++|+||+++ |+
T Consensus 132 ~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~ 211 (336)
T 2r00_A 132 STIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGYTK 211 (336)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSCBH
T ss_pred HHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCccH
Confidence 9999999999999999999999999999999964 8886654 67899999999999975 74
Q ss_pred -----HHHHHHhccccCCceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCC
Q 015637 281 -----AKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 355 (403)
Q Consensus 281 -----akav~kVlPeL~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~ 355 (403)
.++++||||++++|++++|+||||++||++++++++++++++|||+++|++++ +=-++...+-|-.-.+..|
T Consensus 212 Ee~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~~t~~ei~~~~~~~~---~v~v~~~~~~p~~~~~v~g 288 (336)
T 2r00_A 212 EEMKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAPIDAEQVMDMLEQTD---GIELFRGADFPTQVRDAGG 288 (336)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSCCCHHHHHHHHHHST---TEEECCCCSSGGGCCCCCS
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCCCCHHHHHHHHHhCC---CeEEECCCCCCcCHHHhCC
Confidence 56668899999999999999999999999999999999999999999999844 2112221111211114555
Q ss_pred CCcceeeeCCCccccCCceEEEEEEecCC-cchhhhHhHHHHHHhhc
Q 015637 356 SDVSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYSQRVVDLADIVANN 401 (403)
Q Consensus 356 ~~~s~i~d~~~~~~~~~~~~K~~~WyDNE-~gys~r~vdl~~~~~~~ 401 (403)
..+-.|--...... .++.+.++++.||- +|-|-.-|-.+++|.++
T Consensus 289 ~~~~~vgr~~~d~~-~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~~~ 334 (336)
T 2r00_A 289 KDHVLVGRVRNDIS-HHSGINLWVVADNVRKGAATNAVQIAELLVRD 334 (336)
T ss_dssp SSCEEEEEEEEETT-EEEEEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEEecCC-CCCEEEEEEEehhHHHhHHHHHHHHHHHHHhc
Confidence 44443321110000 23457788999998 78888888888877643
No 27
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=9.1e-50 Score=398.07 Aligned_cols=274 Identities=18% Similarity=0.242 Sum_probs=220.9
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhcccc--ceecccCcce-eeecCCeEEECCEEEEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYD--STLGIFEADV-KPVGTDGISVDGKVIQVV 144 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yD--S~~G~f~~~v-~~~~~~~l~i~G~~I~v~ 144 (403)
++||||+|+|+|||.++|+|.+++ +|++++|++. ++++.+++++|| ++||+|++.+ . .++..+.+++.
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~--~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~-~~~~~l~v~~~----- 71 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQD--DMKVIGVSKT-RPDFEARMALKKGYDLYVAIPERVKL-FEKAGIEVAGT----- 71 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSS--SEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHH-HHHTTCCCCEE-----
T ss_pred CeEEEEEeECHHHHHHHHHHHcCC--CcEEEEEEcC-ChhHHHHhcCCcchhhccccccceee-ecCCceEEcCC-----
Confidence 379999999999999999999876 4999999996 567788999988 8999988765 3 33444555432
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCC--CeEEeecCccCCCCCCCeEecCCchh
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI--PTYVVGVNADAYKPDEPIISNASCTT 222 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dv--p~vV~gVN~~~~~~~~~IISnaSCTT 222 (403)
++++.| ++|+||+|||.+.+++.++.|+++|+ +||+++|.++++ |++|||||++.|+. .+||+||||+|
T Consensus 72 ----~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~-~VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~t 142 (337)
T 1cf2_P 72 ----VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNT 142 (337)
T ss_dssp ----HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTC-CEEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHH
T ss_pred ----HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCC-EEEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHH
Confidence 222222 79999999999999999999999996 588887775344 99999999999985 68999999999
Q ss_pred hhHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCC----CCChHHHHHHhccccCCceeEE
Q 015637 223 NCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT----STGAAKAVALVLPALKGKLNGI 298 (403)
Q Consensus 223 n~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~----~tGaakav~kVlPeL~gkl~~~ 298 (403)
|||+|+||||+++|||+++.|||||++|+. .+.+|++++||+|+ .++.++++.|+| +| +++++
T Consensus 143 t~l~~~l~pL~~~~gI~~~~vtt~~a~s~p----------~~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l--~v~~t 209 (337)
T 1cf2_P 143 TGLCRTLKPLHDSFGIKKVRAVIVRRGADP----------AQVSKGPINAIIPNPPKLPSHHGPDVKTVL-DI--NIDTM 209 (337)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEESSCT----------TCTTCCCSSCCEESSSSSSCTHHHHHHTTS-CC--CEEEE
T ss_pred HHHHHHHHHHHHhcCcceeEEEEEEEeecC----------CccccchhcCEEeccCCCCCcchHHHHhhh-ee--EEEEE
Confidence 999999999999999999999999999982 23456899999999 688899999999 88 59999
Q ss_pred EEecccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccccCCCceeecCCCCCcceeeeCCC--ccccCCceEE
Q 015637 299 ALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSL--TLVMGDDMVK 376 (403)
Q Consensus 299 avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~~~p~VS~D~~~~~~s~i~d~~~--~~~~~~~~~K 376 (403)
|+||||++||++++++++++++++|||+++|++++..++ +..+++-+..+.+|+... +.-.+ ++.+
T Consensus 210 ~~rVPv~~g~~~~~~v~l~~~~t~eei~~~~~~~~~v~v-----------~~~~~~~~~~~~~~~~~~~~gr~r~-d~~~ 277 (337)
T 1cf2_P 210 AVIVPTTLMHQHNVMVEVEETPTVDDIIDVFEDTPRVIL-----------ISAEDGLTSTAEIMEYAKELGRSRN-DLFE 277 (337)
T ss_dssp EEEESCCSCEEEEEEEEESSCCCHHHHHHHHHHSTTEEE-----------ECTTTTCCSHHHHHHHHHHHTCGGG-CCCS
T ss_pred EEEcCccCeEEEEEEEEECCCCCHHHHHHHHHhCCCcEE-----------eccccCCCCCcchhhhhhhcCCCcc-Cchh
Confidence 999999999999999999999999999999999864332 112222223333332221 23333 4788
Q ss_pred EEEEecCC
Q 015637 377 VIAWYDNE 384 (403)
Q Consensus 377 ~~~WyDNE 384 (403)
+..||||=
T Consensus 278 ~~~w~~~~ 285 (337)
T 1cf2_P 278 IPVWRESI 285 (337)
T ss_dssp EEEEGGGC
T ss_pred heeehhee
Confidence 99999973
No 28
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2e-46 Score=374.44 Aligned_cols=226 Identities=15% Similarity=0.204 Sum_probs=188.5
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~d 148 (403)
+||||||+|+|||.++|+|.+++ +++|++|+|. ++++..++++++- ++++..++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p--~~elvav~d~-~~~~~~~~a~~~g-----------------------~~~~~~~~ 55 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQP--DMKLVGVAKT-SPNYEAFIAHRRG-----------------------IRIYVPQQ 55 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCT--TEEEEEEECS-SCSHHHHHHHHTT-----------------------CCEECCGG
T ss_pred eEEEEEecCHHHHHHHHHHHcCC--CCEEEEEEcC-ChHHHHHHHHhcC-----------------------cceecCcC
Confidence 79999999999999999999886 5999999995 5666777776431 01111122
Q ss_pred CCCCCCCC-------------cCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCC-CCCeEEeecCccCCCCCCCe
Q 015637 149 PVNLPWGD-------------LGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIPTYVVGVNADAYKPDEPI 214 (403)
Q Consensus 149 p~~i~w~~-------------~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~-dvp~vV~gVN~~~~~~~~~I 214 (403)
|+++ |++ .++|+||+|||.+.+++.++.|+++|+++|.+|++.++ .+++||++||++.+.. .++
T Consensus 56 ~~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~i 133 (340)
T 1b7g_O 56 SIKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKY 133 (340)
T ss_dssp GHHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSE
T ss_pred HHHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCC
Confidence 3222 321 26899999999999999999999999988888887653 3479999999776543 459
Q ss_pred EecCCchhhhHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCC----CCChHHHHHHhccc
Q 015637 215 ISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT----STGAAKAVALVLPA 290 (403)
Q Consensus 215 ISnaSCTTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~----~tGaakav~kVlPe 290 (403)
|+|||||||||+|+||||+++|||+++.|||+|+++. ++++ .|++.+||+|+ .+|+++++.+++|+
T Consensus 134 IsnpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~~-------~~~~---~~~~~~niip~~~~i~t~~a~ev~~vlp~ 203 (340)
T 1b7g_O 134 IRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAAD-------QKEV---KKGPINSLVPDPATVPSHHAKDVNSVIRN 203 (340)
T ss_dssp EEECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSC-------TTCC---SCCCSSCCEESSSSSSCTHHHHHHTTSTT
T ss_pred cccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccCC-------cccc---hHHHHcCCCCCCcCCCCCchhHHHHhCCC
Confidence 9999999999999999999999999999999998753 2333 45789999987 68999999999999
Q ss_pred cCCceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhccc
Q 015637 291 LKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESAD 334 (403)
Q Consensus 291 L~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~ 334 (403)
|+ ++++|+||||++||++++++++++++++|||+++|+++++
T Consensus 204 l~--l~~~a~rVPv~~gh~~~l~v~l~~~~t~eei~~~l~~a~~ 245 (340)
T 1b7g_O 204 LD--IATMAVIAPTTLMHMHFINITLKDKVEKKDILSVLENTPR 245 (340)
T ss_dssp CE--EEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHTCTT
T ss_pred Cc--EEEEEEEeccCCeEEEEEEEEECCCCCHHHHHHHHHcCCC
Confidence 95 9999999999999999999999999999999999998875
No 29
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=6.7e-46 Score=369.12 Aligned_cols=239 Identities=20% Similarity=0.256 Sum_probs=206.3
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhcccc--ceecccCcceeeecCCeEEECCEEEEEE
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYD--STLGIFEADVKPVGTDGISVDGKVIQVV 144 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yD--S~~G~f~~~v~~~~~~~l~i~G~~I~v~ 144 (403)
|++||||+|+|+|||.++|+|.+++ +++|++|+|. +++++.++++|| ++||+|++.+...+++.+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~--~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~------ 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQD--DMELIGITKT-KPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAG------ 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCT--TEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSC------
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCC--CCEEEEEEcC-CHHHHHHHHHhcCccccccccccceeccCCceEEcC------
Confidence 5689999999999999999999886 4999999996 578888999988 8999998766202222233322
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCC-C-CeEEeecCccCCCCCCCeEecCCchh
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-I-PTYVVGVNADAYKPDEPIISNASCTT 222 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~d-v-p~vV~gVN~~~~~~~~~IISnaSCTT 222 (403)
+++++.| ++|+|++|||.+...+.++.|+++| |+||+++|.+.+ . |++|||||++.|+. .+||+||||+|
T Consensus 72 ---d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~t 143 (334)
T 2czc_A 72 ---TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCNT 143 (334)
T ss_dssp ---BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHHH
T ss_pred ---cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeecccccccccceEEeccCHHHHhh-CCcEEecCcHH
Confidence 3444434 7999999999999999999999999 579999987644 4 69999999999875 68999999999
Q ss_pred hhHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCC---CCChHHHHHHhccccCCceeEEE
Q 015637 223 NCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT---STGAAKAVALVLPALKGKLNGIA 299 (403)
Q Consensus 223 n~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~---~tGaakav~kVlPeL~gkl~~~a 299 (403)
|||+|++|+|++. |+++.|+|+|++||.| |++|++++||||+ .+|++++++++|| |+ ++++|
T Consensus 144 ~~l~P~~~~l~~~--I~~g~i~ti~a~s~~~----------~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~~~~ 208 (334)
T 2czc_A 144 TGLVRTLSAIREY--ADYVYAVMIRRAADPN----------DTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IETMA 208 (334)
T ss_dssp HHHHHHHHHHGGG--EEEEEEEEEEESSCTT----------CCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EEEEE
T ss_pred HHHHHHHHHHHHH--hccccEEEEEEecCcc----------ccccChhhcEEeccCCCCchhhhhheEEE-EE--EEEEE
Confidence 9999999999987 9999999999999964 4568899999999 8999999999999 85 99999
Q ss_pred EecccccccEEEEEEEEccCCCHHHHHHHHHhcccccC
Q 015637 300 LRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNEL 337 (403)
Q Consensus 300 vRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~l 337 (403)
+||||+++|++++++++++++++||++++|+++++..+
T Consensus 209 ~rVPv~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~~l 246 (334)
T 2czc_A 209 FVVPTTLMHVHSVMVELKKPLTKDDVIDIFENTTRVLL 246 (334)
T ss_dssp EEESCSSCEEEEEEEEESSCCCHHHHHHHHHTSTTEEE
T ss_pred EEcCCCceEEEEEEEEECCCCCHHHHHHHHHhccCCEe
Confidence 99999999999999999999999999999999986533
No 30
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=2.5e-46 Score=377.34 Aligned_cols=237 Identities=15% Similarity=0.151 Sum_probs=198.1
Q ss_pred eeEEEEc-cChhHHHHHH-HHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 69 LKVAING-FGRIGRNFLR-CWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr-~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
+|||||| ||+||+.++| +|.+++ |+++.| +++.|+| +|+- +. .++|+.+.+...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~---~~~v~i----------~~~~~~s-~G~~---v~-------~~~g~~i~~~~~ 57 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERD---FDAIRP----------VFFSTSQ-LGQA---AP-------SFGGTTGTLQDA 57 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTG---GGGSEE----------EEEESSS-TTSB---CC-------GGGTCCCBCEET
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCC---CCeEEE----------EEEEeCC-CCCC---cc-------ccCCCceEEEec
Confidence 6999999 9999999999 666664 665444 6777776 6651 11 134555666555
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----CCCCeEEeecCccCCCCC--C--CeEecC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPD--E--PIISNA 218 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~dvp~vV~gVN~~~~~~~--~--~IISna 218 (403)
.++++ |. ++|+||+|+|.+.++++++.|+++|+|++||+++++ +++|++|||||++.|+.. . ++|+||
T Consensus 58 ~~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp 133 (367)
T 1t4b_A 58 FDLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGG 133 (367)
T ss_dssp TCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeC
Confidence 45544 64 899999999999999999999999999999999985 368999999999998742 2 699999
Q ss_pred CchhhhHHHHHHHHHhhcCeeEEEEeeeeccccchh-hh------------------hhchh---hhhh-----------
Q 015637 219 SCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQR-LL------------------DASHR---DLRR----------- 265 (403)
Q Consensus 219 SCTTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~-~~------------------D~~~~---d~r~----------- 265 (403)
||||+|++|+|+||+++|+|+++.|||||++||+++ .+ |.+++ |+||
T Consensus 134 ~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~~~ 213 (367)
T 1t4b_A 134 NCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGEL 213 (367)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccccccC
Confidence 999999999999999999999999999999999943 22 22443 7776
Q ss_pred -----hHhhhcccCCCCCC------------hHHHHHHhccc-cCCceeEEEEecccccccEEEEEEEEccCCCHHHHHH
Q 015637 266 -----ARAAALNIVPTSTG------------AAKAVALVLPA-LKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNA 327 (403)
Q Consensus 266 -----~r~~a~NIIP~~tG------------aakav~kVlPe-L~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~ 327 (403)
++++++|+||+++| ..++++|++|+ .+.+++++|+|||+++||++++++++++++++|||++
T Consensus 214 ~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~~t~eei~~ 293 (367)
T 1t4b_A 214 PVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEE 293 (367)
T ss_dssp CCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEEESSCCCHHHHHH
T ss_pred cccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEEECCCCCHHHHHH
Confidence 47899999999987 67788999976 5668999999999999999999999999999999999
Q ss_pred HHHhcc
Q 015637 328 AFRESA 333 (403)
Q Consensus 328 al~~aa 333 (403)
+|++++
T Consensus 294 ~l~~~~ 299 (367)
T 1t4b_A 294 LLAAHN 299 (367)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 999884
No 31
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=4.2e-42 Score=345.47 Aligned_cols=293 Identities=13% Similarity=0.095 Sum_probs=219.7
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+| ||+|||.++|+|.+++ ++++++|++..+. -.+||+.|++|.+.+- ..+ .+ ++
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p--~~elvai~~~~~~-----g~~~~~~~~~~~~~v~----~dl-------~~-~~ 76 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHP--HFQVTLMTADRKA-----GQSMESVFPHLRAQKL----PTL-------VS-VK 76 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCS--SEEEEEEBCSTTT-----TSCHHHHCGGGTTSCC----CCC-------BC-GG
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCC--CcEEEEEeCchhc-----CCCHHHhCchhcCccc----ccc-------ee-cc
Confidence 48999999 9999999999999886 5999999984222 2678999988865420 111 11 11
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCC--CC------------------CeEEee---c
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG--DI------------------PTYVVG---V 203 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~--dv------------------p~vV~g---V 203 (403)
++ .|. ++|+||+|||.+.+++.++.| ++|+ +||+++++. +. |.+|+| +
T Consensus 77 ---~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~ 147 (359)
T 1xyg_A 77 ---DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEI 147 (359)
T ss_dssp ---GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHH
T ss_pred ---hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCcc
Confidence 22 575 899999999999999999999 9998 677777631 11 345555 4
Q ss_pred CccCCCCCCCeEecCCchhhhHHHHHHHHHhhcCee--EEEEeeeeccccchh-hhhhchhhhhhhHhhhcccCCCCCCh
Q 015637 204 NADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGII--KGTMTTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTGA 280 (403)
Q Consensus 204 N~~~~~~~~~IISnaSCTTn~Lap~lk~L~~~fGI~--~~~~TTiha~tg~q~-~~D~~~~d~r~~r~~a~NIIP~~tGa 280 (403)
|++.++. .+|||||||+|||++|+|+||+++|+|+ ++.|+|+|++||+|+ ..|.+|.++ +..|++|+.+|.
T Consensus 148 n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~-----~~~ni~py~~~~ 221 (359)
T 1xyg_A 148 LREDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANLYSE-----IAEGISSYGVTR 221 (359)
T ss_dssp HHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGBHHH-----HTTCCEECSCSC
T ss_pred CHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhhhHH-----HhcCeecccccc
Confidence 9999875 6899999999999999999999999999 999999999999987 577665543 578999999885
Q ss_pred HH-------HHHHhccccCCceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcccc-cCcCcccccCCCceeec
Q 015637 281 AK-------AVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVD 352 (403)
Q Consensus 281 ak-------av~kVlPeL~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~-~lkgil~~~~~p~VS~D 352 (403)
.+ ++++++.+ +.+++++|+|||+++||+++++++++++++.|||+++|+++.++ |+=-++...+-|-. .+
T Consensus 222 h~h~pEi~~~l~~~~~~-~~~v~~t~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~~~y~~~~~V~v~~~~~~p~~-~~ 299 (359)
T 1xyg_A 222 HRHVPEIEQGLSDVAQS-KVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRT-HN 299 (359)
T ss_dssp CTHHHHHHHHHHHHHTS-CCCCEEECEEESSSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCSSEEECCTTCCCBG-GG
T ss_pred cccHHHHHHHHHHhcCC-CCCEEEEEEEecccceEEEEEEEEeCCCCCHHHHHHHHHHhhCCCCCEEEcCCCCCCCH-HH
Confidence 22 22333331 24899999999999999999999999999999999999987643 33333322222322 24
Q ss_pred CCCCCcceeeeCCCccccCCceEEEEEEecCC-cchhhhHhHHHHHHh
Q 015637 353 FRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYSQRVVDLADIVA 399 (403)
Q Consensus 353 ~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE-~gys~r~vdl~~~~~ 399 (403)
..|..+-.|- ..... .++.+.+++|.||- +|.|-.-|-.+++|.
T Consensus 300 v~g~n~~~ig-~~~d~--~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~ 344 (359)
T 1xyg_A 300 VRGSNYCHMS-VFPDR--IPGRAIIISVIDNLVKGASGQALQNLNIML 344 (359)
T ss_dssp TTTSSCEEEE-EEECS--STTEEEEEEEECTTTTTTHHHHHHHHHHHT
T ss_pred hcCCCeEEEE-EEEeC--CCCEEEEEEEehhhhHhHHHHHHHHHHHHh
Confidence 4555544442 11111 23567899999999 899999888888874
No 32
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.6e-42 Score=345.58 Aligned_cols=240 Identities=18% Similarity=0.212 Sum_probs=196.0
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+| ||+||+.++|+|.+++ +++|++|++.. . .....|++.|+.+. ++.+.++++.+.+ .+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p--~~elvai~~s~--~--~~g~~~~~~~~~~~-------~~~~~~~~~~~~~-~~ 69 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHP--YLELVKVSASP--S--KIGKKYKDAVKWIE-------QGDIPEEVQDLPI-VS 69 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCS--SEEEEEEECCG--G--GTTSBHHHHCCCCS-------SSSCCHHHHTCBE-EC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCC--CcEEEEEecCh--h--hcCCCHHHhcCccc-------ccccccCCceeEE-ee
Confidence 58999999 9999999999999886 59999998420 1 11233677776543 1112233333444 33
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----CCCCeEEeecCccCCCC----------CC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKP----------DE 212 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~dvp~vV~gVN~~~~~~----------~~ 212 (403)
.+++. |. ++|+||+|||.+.+++.++.|+++|+ .||+++++ +++|++|||||++.|+. ..
T Consensus 70 ~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~--~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 143 (350)
T 2ep5_A 70 TNYED--HK--DVDVVLSALPNELAESIELELVKNGK--IVVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKG 143 (350)
T ss_dssp SSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSS
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCC--EEEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCc
Confidence 45544 53 89999999999999999999999998 48888864 36899999999998873 23
Q ss_pred CeEecCCchhhhHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCCh-HHHH---HHhc
Q 015637 213 PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AKAV---ALVL 288 (403)
Q Consensus 213 ~IISnaSCTTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGa-akav---~kVl 288 (403)
+||+||||+|||++|+|+||+++|||+++.|||+|++||+|+.. . ..+.+++|++|+++|+ .|.+ .++|
T Consensus 144 ~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~~--~-----~~~~~~~ni~py~~~~e~k~~~E~~~~l 216 (350)
T 2ep5_A 144 ILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYNG--I-----SFMAIEGNIIPYIKGEEDKIAKELTKLN 216 (350)
T ss_dssp EEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSSS--S-----BHHHHTTCCBCCCTTHHHHHHHHHHHHT
T ss_pred eEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCCC--C-----CChHHhCCEEeccCCcchHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999751 2 2357899999999995 6654 7999
Q ss_pred cccCC--------ceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhccc
Q 015637 289 PALKG--------KLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESAD 334 (403)
Q Consensus 289 PeL~g--------kl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~ 334 (403)
|+++| +++++|+|||+++||++++++++++++++|||+++|+++.+
T Consensus 217 ~~~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~~~ 270 (350)
T 2ep5_A 217 GKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLKNFKS 270 (350)
T ss_dssp CEECSSSEECCCCEEEEEEEECSCSSCEEEEEEEECCSCCCHHHHHHHHHTCCC
T ss_pred hhccccccccccccEEEEeEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhc
Confidence 99876 79999999999999999999999999999999999999874
No 33
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.5e-41 Score=336.79 Aligned_cols=253 Identities=20% Similarity=0.253 Sum_probs=197.5
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
|++||||+| ||+||+.++|+|.+++ +++|++|++.... ..-+|++.|+.+... .+..+++.+.+ .
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p--~~ev~~i~~s~~~----~g~~~~~~~~~~~~~-------~~~~~~~~~~~-~ 72 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHP--MFELTALAASERS----AGKKYKDACYWFQDR-------DIPENIKDMVV-I 72 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCS--SEEEEEEEECTTT----TTSBHHHHSCCCCSS-------CCCHHHHTCBC-E
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCC--CCEEEEEEccccc----ccccHHHhccccccc-------ccccCceeeEE-E
Confidence 778999999 9999999999999886 5999999852110 112246666654210 01111222333 2
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----CCCCeEEeecCccCCCC----------C
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKP----------D 211 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~dvp~vV~gVN~~~~~~----------~ 211 (403)
+.++++ |.+.++|+||+|+|.+.+++.++.|+++|+ .||+++++ ++.|++|||||++.|+. .
T Consensus 73 ~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~--~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~ 148 (354)
T 1ys4_A 73 PTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGK--LIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWD 148 (354)
T ss_dssp ESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCCS
T ss_pred eCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCC--EEEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcccC
Confidence 345554 643489999999999999999999999998 48999875 35899999999998873 2
Q ss_pred CCeEecCCchhhhHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCCh-HH---HHHHh
Q 015637 212 EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AK---AVALV 287 (403)
Q Consensus 212 ~~IISnaSCTTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGa-ak---av~kV 287 (403)
.+||+||||+|||++|+|+||+++|||+++.|+|+|++||+|+.. .+ .+.+++||+|+++|+ .| ++.++
T Consensus 149 ~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~~--~~-----~~~~~~ni~py~~~~~~k~~~Ei~~~ 221 (354)
T 1ys4_A 149 GAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYNG--VP-----SMAILDNLIPFIKNEEEKMQTESLKL 221 (354)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTTT--SC-----HHHHTTCCBSCCTTHHHHHHHHHHHH
T ss_pred CeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCccc--cc-----chHHhCCEEeccCchhhHHHHHHHHH
Confidence 359999999999999999999999999999999999999998752 21 256899999999985 44 55677
Q ss_pred ccccCC--------ceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCccccc
Q 015637 288 LPALKG--------KLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVC 344 (403)
Q Consensus 288 lPeL~g--------kl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~ 344 (403)
|+++.| +++++|+|||+++||+++++++++++++.|||+++|+++...+..++.+-.
T Consensus 222 l~~~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~~~~~~~~~~~~~~~ 286 (354)
T 1ys4_A 222 LGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMDKFDPLKDLNLPTYA 286 (354)
T ss_dssp TSEEETTEEECCCCEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHCCTTTTSCCTTCC
T ss_pred HhccccccccCCCceEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhccccccccCCC
Confidence 887655 799999999999999999999999999999999999999742333444333
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=6.8e-40 Score=327.69 Aligned_cols=229 Identities=15% Similarity=0.023 Sum_probs=186.2
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+| ||+|||.++|+|.+++ ++++++|++..+ .-.+|++.|++|.+... +.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p--~~elv~v~s~~~-----~g~~~~~~~~~~~g~~~-------------~~~--- 60 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHP--YLEVKQVTSRRF-----AGEPVHFVHPNLRGRTN-------------LKF--- 60 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCT--TEEEEEEBCSTT-----TTSBGGGTCGGGTTTCC-------------CBC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCC--CcEEEEEECchh-----hCchhHHhCchhcCccc-------------ccc---
Confidence 48999999 9999999999999886 599999997322 22567888887754211 122
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC---C-------------------CCCeEEeecC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK---G-------------------DIPTYVVGVN 204 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~---~-------------------dvp~vV~gVN 204 (403)
.+++ +| .++|+||+|+|.+.+++.++.|+++|++ ||+.+++ + +.|+.|||+|
T Consensus 61 ~~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~--VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n 134 (345)
T 2ozp_A 61 VPPE--KL--EPADILVLALPHGVFAREFDRYSALAPV--LVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELY 134 (345)
T ss_dssp BCGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSE--EEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHH
T ss_pred cchh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCE--EEEcCccccCCChHHHHhhhccccchhhhccCcEeccccC
Confidence 1222 37 3899999999999999999999999984 5655542 1 2445555669
Q ss_pred ccCCCCCCCeEecCCchhhhHHHHHHHHHhhcCee--EEEEeeeeccccchh-hhhhchhhhhhhHhhhcccCCCCCChH
Q 015637 205 ADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGII--KGTMTTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTGAA 281 (403)
Q Consensus 205 ~~~~~~~~~IISnaSCTTn~Lap~lk~L~~~fGI~--~~~~TTiha~tg~q~-~~D~~~~d~r~~r~~a~NIIP~~tGaa 281 (403)
++.++. .+||+||||+|||++|+|+||+++|+|+ ++.|+|+|++||+|+ .+|..|.++ +..|++|+.+|.
T Consensus 135 ~~~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~-----~~~n~~py~~~~- 207 (345)
T 2ozp_A 135 REALKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASHHPE-----RAGSIRVYKPTG- 207 (345)
T ss_dssp HHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGCHHH-----HTTCCEEEECSC-
T ss_pred HHHhhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCccccccccchh-----hccccccCCCCC-
Confidence 999875 6899999999999999999999999999 999999999999985 466665443 578999998884
Q ss_pred HHHHHhccccC-----C-ceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcccc
Q 015637 282 KAVALVLPALK-----G-KLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADN 335 (403)
Q Consensus 282 kav~kVlPeL~-----g-kl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~ 335 (403)
.+++||++ + +++++|+|||+++||+++++++++++++.|||+++|+++.++
T Consensus 208 ---h~~~pei~~~l~~~~~v~~~~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~y~~ 264 (345)
T 2ozp_A 208 ---HRHTAEVVENLPGRPEVHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYREAYAG 264 (345)
T ss_dssp ---CTHHHHHHHTSSSCCCEEEEEEECSCSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTT
T ss_pred ---ccChHhHHHHhCCCCCeEEEEEEeccccEEEEEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 45666665 5 899999999999999999999999999999999999997653
No 35
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=1.3e-38 Score=320.90 Aligned_cols=298 Identities=16% Similarity=0.204 Sum_probs=215.3
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
|++||||+| +|.+|+.++|+|.+++.+.++++.+. | .+ ++|+.+.+.|+.+.+.
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a---------------s--------~~-saG~~~~~~~~~~~~~- 55 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA---------------S--------AR-SAGKSLKFKDQDITIE- 55 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE---------------C--------TT-TTTCEEEETTEEEEEE-
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE---------------c--------cc-cCCCcceecCCCceEe-
Confidence 789999999 99999999999998842234544332 1 12 5677888888887773
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----CCCCeEEeecCccCCCCCCCeEecCCch
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPDEPIISNASCT 221 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~dvp~vV~gVN~~~~~~~~~IISnaSCT 221 (403)
+.+++. |. ++|+||+|+|.+.+++.++.|+++|+ +||+++++ +++|++|||||++.++...+||+||||+
T Consensus 56 ~~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC~ 129 (366)
T 3pwk_A 56 ETTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGV--VVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCS 129 (366)
T ss_dssp ECCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCHH
T ss_pred eCCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCC--EEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCcH
Confidence 344443 43 89999999999999999999999999 56666652 4689999999999998657899999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEeeeeccccchh-hhhhch---hhhhh-------------h-------HhhhcccCCCC
Q 015637 222 TNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQR-LLDASH---RDLRR-------------A-------RAAALNIVPTS 277 (403)
Q Consensus 222 Tn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~-~~D~~~---~d~r~-------------~-------r~~a~NIIP~~ 277 (403)
|+|++|+|+||+++|||+++.|+|+|++||+++ .++..+ ++|+. + +++++|+||++
T Consensus 130 tt~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I 209 (366)
T 3pwk_A 130 TIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQI 209 (366)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCS
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhcccccee
Confidence 999999999999999999999999999999954 444221 11111 1 67999999996
Q ss_pred -----CChHHHHHH-------hccccCCceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCccccc-
Q 015637 278 -----TGAAKAVAL-------VLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVC- 344 (403)
Q Consensus 278 -----tGaakav~k-------VlPeL~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~~- 344 (403)
+|+++++.| +++....+++.+|+|||+++||++.++++++++++.||++++|++++.=. ++...
T Consensus 210 ~~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~~s~eei~~~l~~~~~V~---v~~~~~ 286 (366)
T 3pwk_A 210 DVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIAAFPGAV---LEDDVA 286 (366)
T ss_dssp SCBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHSTTEE---ECCBGG
T ss_pred cccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCCCCHHHHHHHHHhCCCcE---EecCcc
Confidence 477777764 45555567999999999999999999999999999999999999973111 11111
Q ss_pred --CCCceeecCCCCCcceeeeCCCccccCCceEEEEEEecCC-cchhhhHhHHHHHHhh
Q 015637 345 --DEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYSQRVVDLADIVAN 400 (403)
Q Consensus 345 --~~p~VS~D~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDNE-~gys~r~vdl~~~~~~ 400 (403)
.-|-. .+..|..+-.|-=.... ...++.+.+++=-||= +|=|-.-|-.|+.|.+
T Consensus 287 ~~~~P~~-~~v~gtn~~~Vgr~r~d-~~~~~~l~~~~~~DNL~KGAAg~AVQn~nlm~~ 343 (366)
T 3pwk_A 287 HQIYPQA-INAVGSRDTFVGRIRKD-LDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHE 343 (366)
T ss_dssp GTBCCCH-HHHTTCSSEEEEEEEEC-SSCTTEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred cCCCCch-hHcCCCCEEEEEEEEec-CCCCCEEEEEEEEccHHHhHHHHHHHHHHHHHH
Confidence 01111 13334333222100000 0123446666668994 5666666666666654
No 36
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=1.4e-39 Score=329.07 Aligned_cols=294 Identities=14% Similarity=0.130 Sum_probs=206.9
Q ss_pred ceeEEEEc-cChhHHHHHH-HHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEE-ECCEEEEEE
Q 015637 68 KLKVAING-FGRIGRNFLR-CWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGIS-VDGKVIQVV 144 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr-~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~-i~G~~I~v~ 144 (403)
++||||+| +|.+|+.++| +|++|+.+.++++.+... ..|+.+. +.|+.+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-------------------------~aG~~~~~~~~~~~~v~ 58 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-------------------------NAGGKAPSFAKNETTLK 58 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-------------------------CTTSBCCTTCCSCCBCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-------------------------hcCCCHHHcCCCceEEE
Confidence 47999999 9999999999 999987323455444321 1122211 334333332
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----CCCCeEEeecCccCCCCC--CC--eEe
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPD--EP--IIS 216 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~dvp~vV~gVN~~~~~~~--~~--IIS 216 (403)
...+++. | .++|+||+|+|.+.++++++.|+++|+|++||+++++ +++|++|||||++.++.. ++ +|+
T Consensus 59 ~~~~~~~--~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 134 (377)
T 3uw3_A 59 DATSIDD--L--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFI 134 (377)
T ss_dssp ETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCChhH--h--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEEE
Confidence 2222322 3 3899999999999999999999999999899999974 367999999999988642 33 599
Q ss_pred cCCchhhhHHHHHHHHHhhcCeeEEEEeeeeccccchh-hhhhchhh---------------------------------
Q 015637 217 NASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQR-LLDASHRD--------------------------------- 262 (403)
Q Consensus 217 naSCTTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~-~~D~~~~d--------------------------------- 262 (403)
||||+|||++|+|+||+++|+|+++.|||||++||+++ .++..+..
T Consensus 135 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~~ 214 (377)
T 3uw3_A 135 GGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNGD 214 (377)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHST
T ss_pred cCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999853 33311100
Q ss_pred ----hhhhHhhhcccCCCCC-----ChHHH-------HHHhcccc------CCceeEEEEecccccccEEEEEEEEccCC
Q 015637 263 ----LRRARAAALNIVPTST-----GAAKA-------VALVLPAL------KGKLNGIALRVPTPNVSVVDLVVQVSKKT 320 (403)
Q Consensus 263 ----~r~~r~~a~NIIP~~t-----Gaaka-------v~kVlPeL------~gkl~~~avRVPv~~gs~~dl~v~~~k~~ 320 (403)
-.+++++++|++|++. |++++ +.|++.++ ..+++++|+|||+++||+..+++++++++
T Consensus 215 ~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~~ 294 (377)
T 3uw3_A 215 AMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKDV 294 (377)
T ss_dssp TSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSCC
T ss_pred ccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEEEEeCCCC
Confidence 1123468999999963 55544 45677654 56799999999999999999999999999
Q ss_pred CHHHHHHHHHhcccccCcCcccccCC-------CceeecCCCCCccee----eeCCCccccCCceEEEEEEecC-Ccchh
Q 015637 321 FAEEVNAAFRESADNELKGILSVCDE-------PLVSVDFRCSDVSST----VDSSLTLVMGDDMVKVIAWYDN-EWGYS 388 (403)
Q Consensus 321 s~eeI~~al~~aa~~~lkgil~~~~~-------p~VS~D~~~~~~s~i----~d~~~~~~~~~~~~K~~~WyDN-E~gys 388 (403)
+.||++++|+++. | ++--+.++ |- -.+..|..+-.| .|. .+++.+.+++=-|| -||=|
T Consensus 295 ~~eei~~~l~~~~--p--~V~v~~~~~~~~~~~P~-p~~v~G~n~v~VGrir~d~-----~~~~~l~~~~v~DNL~KGAA 364 (377)
T 3uw3_A 295 PLDEINGILASAN--D--WVKVVPNEREASMRDLS-PAKVTGTLSVPVGRLRKLA-----MGGEYLSAFTVGDQLLWGAA 364 (377)
T ss_dssp CHHHHHHHHHTSC--S--SEEECCSSHHHHHHHSS-HHHHTTSSCEEEEEEEECT-----TCTTEEEEEEEEETTCCCCC
T ss_pred CHHHHHHHHHhCC--C--CEEEecCCcccccCCCC-HHHhcCCCcEEEEEEEECC-----CCCCEEEEEEEehhhhHhHH
Confidence 9999999999882 2 22111111 10 013334332221 021 12344555555788 46777
Q ss_pred hhHhHHHHHHhh
Q 015637 389 QRVVDLADIVAN 400 (403)
Q Consensus 389 ~r~vdl~~~~~~ 400 (403)
-..+-.++.|.+
T Consensus 365 gqAvqn~nl~~~ 376 (377)
T 3uw3_A 365 EPLRRMLRILLD 376 (377)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 777777776654
No 37
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=2.7e-39 Score=325.15 Aligned_cols=305 Identities=17% Similarity=0.227 Sum_probs=211.3
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec--CCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEE
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND--TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd--~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v 143 (403)
|++||||+| +|.+|+.++|+|.++| +++++.+.. ..+..+. ..+.+- .+..++... +.+.+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP--~~el~~l~S~~saGk~~~-~~~p~~-~~~~~~~~~------------~~~~v 69 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHP--YIKPAYLAGKGSVGKPYG-EVVRWQ-TVGQVPKEI------------ADMEI 69 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCS--SEEEEEEEESTTTTSBHH-HHCCCC-SSSCCCHHH------------HTCBC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCC--CceEEEEECchhcCCChh-Hhcccc-ccccccccc------------ccceE
Confidence 368999999 9999999999999887 599988854 1222111 110000 000001000 01122
Q ss_pred EecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCC--CCCCCeEEeecCccCCCC--C--------
Q 015637 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPG--KGDIPTYVVGVNADAYKP--D-------- 211 (403)
Q Consensus 144 ~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps--~~dvp~vV~gVN~~~~~~--~-------- 211 (403)
++.+++. | .++|+||+|+|.+.+++.++.|+++|++.|.+|++. ++++|++|||||++.++. .
T Consensus 70 -~~~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~ 144 (359)
T 4dpk_A 70 -KPTDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWK 144 (359)
T ss_dssp -EECCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCS
T ss_pred -EeCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccC
Confidence 1223433 3 289999999999999999999999999554445543 247899999999999853 1
Q ss_pred CCeEecCCchhhhHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCCh-HH---HHHHh
Q 015637 212 EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AK---AVALV 287 (403)
Q Consensus 212 ~~IISnaSCTTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGa-ak---av~kV 287 (403)
.+|||||||+|+|++++|+||+++|||+++.|+|+|++||+|+. . .+ .+.+++|++|+++|. .| ++.|+
T Consensus 145 ~~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~-~-~~-----~~~~~~N~ipy~~~~e~k~~~Ei~ki 217 (359)
T 4dpk_A 145 GFIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP-G-IP-----SLDVVDNILPLGDGYDAKTIKEIFRI 217 (359)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS-C-SB-----GGGTTTCCEECCHHHHHHHHHHHHHH
T ss_pred ccEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc-C-cc-----ChHHhCCeEeecCcHHHHHHHHHHHH
Confidence 25999999999999999999999999999999999999999875 2 11 246899999999876 44 57889
Q ss_pred ccccCC----------ceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhccccc-CcCcccccCCCceeecCCCC
Q 015637 288 LPALKG----------KLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNE-LKGILSVCDEPLVSVDFRCS 356 (403)
Q Consensus 288 lPeL~g----------kl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~-lkgil~~~~~p~VS~D~~~~ 356 (403)
|++++| +++++|+|||+++||+++++++++++++.|||+++|+++.+.+ ..++++.++..+.-.|-..-
T Consensus 218 l~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p~~fV~v~~~~~~ 297 (359)
T 4dpk_A 218 LSEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAPSKPIIVMNEDTR 297 (359)
T ss_dssp HHTSCCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEECCSTTC
T ss_pred HhhcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCCCccEEEcCCCCC
Confidence 998876 7999999999999999999999999999999999999987652 22333333222111111000
Q ss_pred C-------------cceeeeCCCccccCCceEEEEEEecCC-cchhhhHhHHHHHHhhc
Q 015637 357 D-------------VSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYSQRVVDLADIVANN 401 (403)
Q Consensus 357 ~-------------~s~i~d~~~~~~~~~~~~K~~~WyDNE-~gys~r~vdl~~~~~~~ 401 (403)
| ..+.+- .... .+++.+.+++=-||= +|=|-.-+-.+++|.++
T Consensus 298 P~~~~~~g~~~~~~~~~~Vg-r~r~-~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~~ 354 (359)
T 4dpk_A 298 PQVYFDRWAGDIPGMSVVVG-RLKQ-VNKRMIRLVSLIHNTVRGAAGGGILAAELLVEK 354 (359)
T ss_dssp CCHHHHTTCTTTTTCSEEEE-EEEE-EETTEEEEEEEECTTTTTTHHHHHHHHHHHHHT
T ss_pred CCHHHhhccCCCcCCeEEEE-EEEE-cCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHHc
Confidence 0 111110 0000 123456777778994 57666666666666543
No 38
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=2.7e-39 Score=325.15 Aligned_cols=305 Identities=17% Similarity=0.227 Sum_probs=211.7
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec--CCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEE
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND--TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd--~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v 143 (403)
|++||||+| +|.+|+.++|+|.++| +++++.+.. ..+..+. ..+.+- .+..++... +.+.+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP--~~el~~l~S~~saGk~~~-~~~p~~-~~~~~~~~~------------~~~~v 69 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHP--YIKPAYLAGKGSVGKPYG-EVVRWQ-TVGQVPKEI------------ADMEI 69 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCS--SEEEEEEEESTTTTSBHH-HHCCCC-SSSCCCHHH------------HTCBC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCC--CceEEEEECchhcCCChh-Hhcccc-ccccccccc------------ccceE
Confidence 368999999 9999999999999887 599988854 1222111 110000 000001000 01122
Q ss_pred EecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCC--CCCCCeEEeecCccCCCC--C--------
Q 015637 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPG--KGDIPTYVVGVNADAYKP--D-------- 211 (403)
Q Consensus 144 ~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps--~~dvp~vV~gVN~~~~~~--~-------- 211 (403)
++.+++. | .++|+||+|+|.+.+++.++.|+++|++.|.+|++. ++++|++|||||++.++. .
T Consensus 70 -~~~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~ 144 (359)
T 4dpl_A 70 -KPTDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWK 144 (359)
T ss_dssp -EECCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCS
T ss_pred -EeCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccC
Confidence 1223433 3 289999999999999999999999999554445543 247899999999999853 1
Q ss_pred CCeEecCCchhhhHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCCh-HH---HHHHh
Q 015637 212 EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AK---AVALV 287 (403)
Q Consensus 212 ~~IISnaSCTTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGa-ak---av~kV 287 (403)
.+|||||||+|+|++++|+||+++|||+++.|+|+|++||+|+. . .+ .+.+++|++|+++|. .| ++.|+
T Consensus 145 ~~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~-~-~~-----~~~~~~N~ipy~~~~e~k~~~Ei~ki 217 (359)
T 4dpl_A 145 GFIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP-G-IP-----SLDVVDNILPLGDGYDAKTIKEIFRI 217 (359)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS-C-SB-----HHHHTTCCEECCHHHHHHHHHHHHHH
T ss_pred ccEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc-C-cc-----ChHHhCCeEeecCcHHHHHHHHHHHH
Confidence 25999999999999999999999999999999999999999875 1 11 246899999999876 44 57899
Q ss_pred ccccCC----------ceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhccccc-CcCcccccCCCceeecCCCC
Q 015637 288 LPALKG----------KLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNE-LKGILSVCDEPLVSVDFRCS 356 (403)
Q Consensus 288 lPeL~g----------kl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~-lkgil~~~~~p~VS~D~~~~ 356 (403)
|++++| +++++|+|||+++||+++++++++++++.|||+++|+++.+.+ ..++++.++..+.-.|-..-
T Consensus 218 l~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p~~fV~v~~~~~~ 297 (359)
T 4dpl_A 218 LSEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAPSKPIIVMNEDTR 297 (359)
T ss_dssp HTTSCCSSCCSCGGGCEEEEECEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEEECSTTC
T ss_pred HhhcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCCCccEEEcCCCCC
Confidence 998876 7999999999999999999999999999999999999987652 22333333322211111000
Q ss_pred C-------------cceeeeCCCccccCCceEEEEEEecCC-cchhhhHhHHHHHHhhc
Q 015637 357 D-------------VSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYSQRVVDLADIVANN 401 (403)
Q Consensus 357 ~-------------~s~i~d~~~~~~~~~~~~K~~~WyDNE-~gys~r~vdl~~~~~~~ 401 (403)
| ..+.+- .... .+++.+.+++=-||= +|=|-.-+-.+++|.++
T Consensus 298 P~~~~~~g~~~~~~~~~~Vg-r~r~-~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~~ 354 (359)
T 4dpl_A 298 PQVYFDRWAGDIPGMSVVVG-RLKQ-VNKRMIRLVSLIHNTVRGAAGGGILAAELLVEK 354 (359)
T ss_dssp CCHHHHTTCTTTTTCSEEEE-EEEE-EETTEEEEEEEECTTTTTTHHHHHHHHHHHHHT
T ss_pred CCHHHhhccCCCcCCeEEEE-EEEE-cCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHHc
Confidence 0 111110 0000 123456777778994 57666666666666543
No 39
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=2.5e-39 Score=326.46 Aligned_cols=292 Identities=14% Similarity=0.119 Sum_probs=205.3
Q ss_pred eeEEEEc-cChhHHHHHH-HHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEE-ECCEEEEEEe
Q 015637 69 LKVAING-FGRIGRNFLR-CWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGIS-VDGKVIQVVS 145 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr-~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~-i~G~~I~v~~ 145 (403)
|||||+| +|.+|+.++| +|++||.+.++++.+... ..|+.+. +.|+.+.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-------------------------~aG~~~~~~~~~~~~~~~ 55 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS-------------------------QIGVPAPNFGKDAGMLHD 55 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS-------------------------STTSBCCCSSSCCCBCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc-------------------------ccCcCHHHhCCCceEEEe
Confidence 5899999 9999999999 999997323465544321 1122211 3443333422
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----CCCCeEEeecCccCCCCC--C--CeEec
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPD--E--PIISN 217 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~dvp~vV~gVN~~~~~~~--~--~IISn 217 (403)
..+++. | .++|+||+|+|.+.++++++.|+++|+|++|||++++ +++|++|||||++.++.. + ++|+|
T Consensus 56 ~~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ian 131 (370)
T 3pzr_A 56 AFDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVG 131 (370)
T ss_dssp TTCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEc
Confidence 223332 3 3899999999999999999999999999899999974 367999999999998642 3 45999
Q ss_pred CCchhhhHHHHHHHHHhhcCeeEEEEeeeeccccchh-hhhhchhh----------------------------------
Q 015637 218 ASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQR-LLDASHRD---------------------------------- 262 (403)
Q Consensus 218 aSCTTn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~-~~D~~~~d---------------------------------- 262 (403)
|||||||++|+|+||+++|||+++.|||||++||+++ .++..+..
T Consensus 132 p~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~~ 211 (370)
T 3pzr_A 132 GNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRSGS 211 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSTT
T ss_pred CChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999853 33311100
Q ss_pred ---hhhhHhhhcccCCCCC-----ChHHH-------HHHhccc--cCCceeEEEEecccccccEEEEEEEEccCCCHHHH
Q 015637 263 ---LRRARAAALNIVPTST-----GAAKA-------VALVLPA--LKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEV 325 (403)
Q Consensus 263 ---~r~~r~~a~NIIP~~t-----Gaaka-------v~kVlPe--L~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI 325 (403)
-.+++++++|++|++. |++++ +.|+++. -..+++++|+|||+++||+..++++++++++.||+
T Consensus 212 ~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~~~~~ei 291 (370)
T 3pzr_A 212 FPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDEI 291 (370)
T ss_dssp SCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEEEEEEEEEESSCCCHHHH
T ss_pred cccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHHH
Confidence 1123458999999974 54444 4566663 24579999999999999999999999999999999
Q ss_pred HHHHHhcccccCcCccc--------ccCCCceeecCCCCCccee----eeCCCccccCCceEEEEEEecC-CcchhhhHh
Q 015637 326 NAAFRESADNELKGILS--------VCDEPLVSVDFRCSDVSST----VDSSLTLVMGDDMVKVIAWYDN-EWGYSQRVV 392 (403)
Q Consensus 326 ~~al~~aa~~~lkgil~--------~~~~p~VS~D~~~~~~s~i----~d~~~~~~~~~~~~K~~~WyDN-E~gys~r~v 392 (403)
+++|+++. |+=-++. |+ .|. +..|..+..| .|. .+++.+.+++=-|| -||=|-..+
T Consensus 292 ~~~l~~~~--p~V~v~~~~~~~~~~~P-~p~---~v~G~n~v~VGrir~d~-----~~~~~l~~~~v~DNL~KGAAgqAv 360 (370)
T 3pzr_A 292 EEMIATHN--DWVKVIPNERDITAREL-TPA---KVTGTLSVPVGRLRKMA-----MGDDFLNAFTVGDQLLWGAAEPLR 360 (370)
T ss_dssp HHHHHTSC--SSEEECCSCHHHHHHHS-SHH---HHTTSCCEEEEEEEEET-----TEEEEEEEEEEEETTTTTTHHHHH
T ss_pred HHHHHhCC--CCEEEecCCcccccCCC-CHH---HhcCCccEEEEEEEECC-----CCCCEEEEEEEehhhhHhHHHHHH
Confidence 99999882 2211111 11 121 3334332221 021 01233444455788 468777777
Q ss_pred HHHHHHhh
Q 015637 393 DLADIVAN 400 (403)
Q Consensus 393 dl~~~~~~ 400 (403)
-.++.|.+
T Consensus 361 Qn~Nl~~~ 368 (370)
T 3pzr_A 361 RTLRIILA 368 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77777654
No 40
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=1.9e-37 Score=310.06 Aligned_cols=291 Identities=19% Similarity=0.255 Sum_probs=211.5
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
+||||+| +|.+|+.++|+|.+|+.+.++++.+. | -+ +.|+.+.+.|+.+.+. +.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~---------------s--------~~-~aG~~~~~~~~~~~~~-~~ 56 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA---------------S--------AR-SQGRKLAFRGQEIEVE-DA 56 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE---------------C--------TT-TSSCEEEETTEEEEEE-ET
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE---------------C--------cc-cCCCceeecCCceEEE-eC
Confidence 7999999 99999999999999852234544332 1 12 5678888999887773 33
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----CCCCeEEeecCc-cCCCCC-CCeEecCCch
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNA-DAYKPD-EPIISNASCT 221 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~dvp~vV~gVN~-~~~~~~-~~IISnaSCT 221 (403)
+++. |. ++|+||+|+|.+.+++.++.|+++|+ +||+++++ +++|++|||||+ +.++.. .+||+||||+
T Consensus 57 ~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~ 130 (344)
T 3tz6_A 57 ETAD--PS--GLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCT 130 (344)
T ss_dssp TTSC--CT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHH
T ss_pred CHHH--hc--cCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcH
Confidence 4443 43 89999999999999999999999999 67877763 478999999999 988764 6899999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEeeeeccccchh-hhhhchhhh-----------------------hhhHhhhcccCCCC
Q 015637 222 TNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQR-LLDASHRDL-----------------------RRARAAALNIVPTS 277 (403)
Q Consensus 222 Tn~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~-~~D~~~~d~-----------------------r~~r~~a~NIIP~~ 277 (403)
|+|++|+|+||+++|||+++.|||+|++||+++ .++..+... .....+++|++|++
T Consensus 131 tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i 210 (344)
T 3tz6_A 131 TMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLA 210 (344)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCC
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999954 444322111 22445899999984
Q ss_pred -----CCh--HHHH-------HHhccccCCceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcccccCcCcccc
Q 015637 278 -----TGA--AKAV-------ALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSV 343 (403)
Q Consensus 278 -----tGa--akav-------~kVlPeL~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~~~lkgil~~ 343 (403)
+|. ++++ +|++..-..+++.+|+|||+++||++.++++++++++.||++++|++++ +=-++.|
T Consensus 211 ~~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~~s~eei~~~l~~~p---~V~v~~~ 287 (344)
T 3tz6_A 211 GSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGAT---GVQLVDV 287 (344)
T ss_dssp SCBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSCCCHHHHHHHHHHCT---TEEECSS
T ss_pred cccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCCCCHHHHHHHHhcCC---CeEEECC
Confidence 244 4443 4666433357999999999999999999999999999999999999653 2112222
Q ss_pred cCCCceeecCCCCCcceee----eCCCccccCCceEEEEEEecCC-cchhhhHhHHHHHHhh
Q 015637 344 CDEPLVSVDFRCSDVSSTV----DSSLTLVMGDDMVKVIAWYDNE-WGYSQRVVDLADIVAN 400 (403)
Q Consensus 344 ~~~p~VS~D~~~~~~s~i~----d~~~~~~~~~~~~K~~~WyDNE-~gys~r~vdl~~~~~~ 400 (403)
+. | .+..|..+-.|- |... -+++.+.+++=-||= +|=|-.-|-.+++|.+
T Consensus 288 P~-p---~~v~gtn~~~Vgrir~d~~~---~~~~~l~~~~~~DNL~KGAAg~AVQ~anll~~ 342 (344)
T 3tz6_A 288 PT-P---LAAAGVDESLVGRIRRDPGV---PDGRGLALFVSGDNLRKGAALNTIQIAELLTA 342 (344)
T ss_dssp CC-H---HHHTTCSSEEEEEEEECTTS---GGGCEEEEEEEECTTTTTTHHHHHHHHHHHTC
T ss_pred CC-h---HHhCCCceEEEEEEEecCCC---CCCCEEEEEEEEcchhHhHHHHHHHHHHHHHh
Confidence 21 1 133443332221 1100 001256677778994 6766666666666543
No 41
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=2.8e-37 Score=312.62 Aligned_cols=241 Identities=22% Similarity=0.279 Sum_probs=181.2
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec---CCChhHHhhhccccceecccCcceeeecCCeEEECCEEEE
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND---TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQ 142 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd---~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~ 142 (403)
+++||||+| +|.+|+.++|+|.+|| +++|+.+-. ..+..+- ..| +|... ..|..+++.+.
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp--~~el~~l~aS~~saGk~~~-------~~~-~~~~~------~~~p~~~~~~~ 81 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHP--EFEIHALGASSRSAGKKYK-------DAA-SWKQT------ETLPETEQDIV 81 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCS--SEEEEEEEECTTTTTSBHH-------HHC-CCCCS------SCCCHHHHTCB
T ss_pred CccEEEEECCCChHHHHHHHHHHcCC--CceEEEeeccccccCCCHH-------Hhc-ccccc------cccccccccce
Confidence 368999999 9999999999999987 599887742 2222211 111 11000 00000001122
Q ss_pred EEecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----CCCCeEEeecCccCCC---------
Q 015637 143 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYK--------- 209 (403)
Q Consensus 143 v~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~dvp~vV~gVN~~~~~--------- 209 (403)
+ ++.++.+ .|. ++|+||+|+|.+.+++.++.++++|+ +||+++++ +++|++|++||++.|.
T Consensus 82 v-~~~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~--~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~ 155 (381)
T 3hsk_A 82 V-QECKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGL--AVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQA 155 (381)
T ss_dssp C-EESSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHH
T ss_pred E-EeCchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCC--EEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhh
Confidence 2 2233331 343 89999999999999999999999999 56766543 3689999999999885
Q ss_pred ------CCCCeEecCCchhhhHHHHHHHHHhhcC-eeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCCh-H
Q 015637 210 ------PDEPIISNASCTTNCLAPFVKVLDQKFG-IIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-A 281 (403)
Q Consensus 210 ------~~~~IISnaSCTTn~Lap~lk~L~~~fG-I~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGa-a 281 (403)
...+||+||||+|+|++++|+||+++|| |+++.|+|+|++||+|+.... ..+.+++|++|+++|. .
T Consensus 156 ~~~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~~------~~~~~~~N~~Py~~~~e~ 229 (381)
T 3hsk_A 156 VSKGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPGV------SGMDILDNIVPYISGEED 229 (381)
T ss_dssp HHTTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC------C------CHHHHTTCCBCCCTTHHH
T ss_pred cccccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCCc------chhhhhcChhhcccchHH
Confidence 2356999999999999999999999999 999999999999999862111 1246899999999886 3
Q ss_pred H---HHHHhccccCC-------------ceeEEEEecccccccEEEEEEEEcc--CCCHHHHHHHHHhcccc
Q 015637 282 K---AVALVLPALKG-------------KLNGIALRVPTPNVSVVDLVVQVSK--KTFAEEVNAAFRESADN 335 (403)
Q Consensus 282 k---av~kVlPeL~g-------------kl~~~avRVPv~~gs~~dl~v~~~k--~~s~eeI~~al~~aa~~ 335 (403)
| |+.|+|+.+++ +++++|+|||+++||++++++++++ +++.|||+++|+++..+
T Consensus 230 k~~~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~~t~eei~~~l~~~y~~ 301 (381)
T 3hsk_A 230 KLEWETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPAPSVEDVKQCLREYECA 301 (381)
T ss_dssp HHHHHHHHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSCCCHHHHHHHHHHCBCH
T ss_pred HHHHHHHHHhhhcccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCCCCHHHHHHHHHHhhcc
Confidence 3 56788987765 8999999999999999999999999 99999999999998754
No 42
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=1.4e-35 Score=295.97 Aligned_cols=290 Identities=13% Similarity=0.108 Sum_probs=203.8
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
| +||+|.| +|.+|+.++|+|.+++ +++++++....+.+.. --++...|..|.+. ..+.+.
T Consensus 4 M-~kv~IvGatG~vG~~l~~~L~~~p--~~el~~l~s~~~~~sa--Gk~~~~~~p~~~~~-------------~~~~v~- 64 (337)
T 3dr3_A 4 M-LNTLIVGASGYAGAELVTYVNRHP--HMNITALTVSAQSNDA--GKLISDLHPQLKGI-------------VELPLQ- 64 (337)
T ss_dssp C-EEEEEETTTSHHHHHHHHHHHHCT--TEEEEEEEEETTCTTT--TSBHHHHCGGGTTT-------------CCCBEE-
T ss_pred c-eEEEEECCCChHHHHHHHHHHhCC--CCcEEEEEecCchhhc--CCchHHhCccccCc-------------cceeEe-
Confidence 5 7999999 9999999999999986 4998887542100000 00011112112110 012221
Q ss_pred cC-CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC----C-CCC---------------e---EEe
Q 015637 146 NR-NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----G-DIP---------------T---YVV 201 (403)
Q Consensus 146 ~~-dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~----~-dvp---------------~---vV~ 201 (403)
+. +++++ . .++|+||+|+|.+.+++.++.|+++|++ ||+.+++ + ++| . .+|
T Consensus 65 ~~~~~~~~--~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~--vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglP 139 (337)
T 3dr3_A 65 PMSDISEF--S-PGVDVVFLATAHEVSHDLAPQFLEAGCV--VFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLA 139 (337)
T ss_dssp EESSGGGT--C-TTCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCT
T ss_pred ccCCHHHH--h-cCCCEEEECCChHHHHHHHHHHHHCCCE--EEEcCCccccCCcccchhhccccccChhhhcceEEEcc
Confidence 11 33333 1 2799999999999999999999999994 5544432 2 232 2 355
Q ss_pred ecCccCCCCCCCeEecCCchhhhHHHHHHHHHh--hcCeeEE-EEeeeeccccch-hhhhhchhhhhhhHhhhcccCCCC
Q 015637 202 GVNADAYKPDEPIISNASCTTNCLAPFVKVLDQ--KFGIIKG-TMTTTHSYTGDQ-RLLDASHRDLRRARAAALNIVPTS 277 (403)
Q Consensus 202 gVN~~~~~~~~~IISnaSCTTn~Lap~lk~L~~--~fGI~~~-~~TTiha~tg~q-~~~D~~~~d~r~~r~~a~NIIP~~ 277 (403)
|+|.+.++. .+||+||||+|+|++++|+||++ .|+++++ .|+|+|++||++ +.+|..+.+.| |++|+.
T Consensus 140 Evn~~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~~~~~-------n~~py~ 211 (337)
T 3dr3_A 140 EWCGNKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEV-------SLQPYG 211 (337)
T ss_dssp TTCCHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTSGGGC-------SEEECS
T ss_pred ccCHHHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccccccc-------ceEccC
Confidence 669998874 68999999999999999999999 6999999 999999999996 56665555543 999998
Q ss_pred CChHHHHHHhccccCC----ceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhc-ccccCcCcccccCCCceeec
Q 015637 278 TGAAKAVALVLPALKG----KLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRES-ADNELKGILSVCDEPLVSVD 352 (403)
Q Consensus 278 tGaakav~kVlPeL~g----kl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~a-a~~~lkgil~~~~~p~VS~D 352 (403)
++. .+.+||+++ +++++|+|||+++||+++++++++++++.|||+++|+++ +..|+=-++.-.+ |-. .+
T Consensus 212 ~~~----h~h~Pei~~~l~~~v~ft~~rvPv~rG~~~ti~~~l~~~~t~eev~~~l~~~Y~~~p~V~v~~~~~-P~~-~~ 285 (337)
T 3dr3_A 212 VFT----HRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDKGV-PAL-KN 285 (337)
T ss_dssp TTT----CTHHHHHHHHHTSCCEEEEEEESSSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCTTEEECSSSC-CCG-GG
T ss_pred ccc----ceechhHHhhhcCCEEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHHhCCCCCEEECCCCC-CCH-HH
Confidence 875 346777665 899999999999999999999999999999999999986 3334433332111 322 25
Q ss_pred CCCCCcceeeeCCCccccCCceEEEEEEecC-CcchhhhHhHHHHHHh
Q 015637 353 FRCSDVSSTVDSSLTLVMGDDMVKVIAWYDN-EWGYSQRVVDLADIVA 399 (403)
Q Consensus 353 ~~~~~~s~i~d~~~~~~~~~~~~K~~~WyDN-E~gys~r~vdl~~~~~ 399 (403)
..|..+-.|- ...+++.+.+++..|| -+|=|-.-+-.|+.|.
T Consensus 286 v~gtn~~~ig-----~~~~~~~l~~~~~~DNL~KGAAgqAVQ~~nlm~ 328 (337)
T 3dr3_A 286 VVGLPFCDIG-----FAVQGEHLIIVATEDNLLKGAAAQAVQCANIRF 328 (337)
T ss_dssp TTTSSCEEEE-----EEEETTEEEEEEEECTTTTTTHHHHHHHHHHHH
T ss_pred hCCCCcEEEE-----EEEeCCEEEEEEEechHHHHHHHHHHHHHHHHh
Confidence 5555543331 1111456778888999 5787777777777764
No 43
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=100.00 E-value=1.6e-33 Score=282.59 Aligned_cols=299 Identities=14% Similarity=0.057 Sum_probs=207.9
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCC-CC--CceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEE
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRK-DS--PLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~-~~--~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v 143 (403)
++||+|+| +|+||+.++|.|.+++ .+ ++++++++...+.. -++++.|++|.+..+ +.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~ag-----k~~~~~~~~l~~~~~-------------~~~ 70 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAG-----STLGEHHPHLTPLAH-------------RVV 70 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTT-----SBGGGTCTTCGGGTT-------------CBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCC-----Cchhhhcccccccce-------------eee
Confidence 47999999 9999999999999875 00 48999997531111 124666666543111 111
Q ss_pred EecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC--C-C-------------CCeEEeec--Cc
Q 015637 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK--G-D-------------IPTYVVGV--NA 205 (403)
Q Consensus 144 ~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~--~-d-------------vp~vV~gV--N~ 205 (403)
.+.+++. |. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++.. + + .|..|||+ |.
T Consensus 71 -~~~~~~~--~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~ 144 (352)
T 2nqt_A 71 -EPTEAAV--LG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGAR 144 (352)
T ss_dssp -EECCHHH--HT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHH
T ss_pred -ccCCHHH--hc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCH
Confidence 1122322 54 799999999999999999999 99985444455532 2 2 28889999 99
Q ss_pred cCCCCCCCeEecCCchhhhHHHHHHHHHhhcCee-EEEEeeeeccccc-hhhhhhchhhhhhhHhhhcccCC-CCCC--h
Q 015637 206 DAYKPDEPIISNASCTTNCLAPFVKVLDQKFGII-KGTMTTTHSYTGD-QRLLDASHRDLRRARAAALNIVP-TSTG--A 280 (403)
Q Consensus 206 ~~~~~~~~IISnaSCTTn~Lap~lk~L~~~fGI~-~~~~TTiha~tg~-q~~~D~~~~d~r~~r~~a~NIIP-~~tG--a 280 (403)
+.++ ..+||+||+|+|+|++++|+||+++|+|+ ++.|+|+|++||+ ++..|..+.+.++.+..++|++| +.+- -
T Consensus 145 ~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~~~~~~~~~~ay~~~~~h~h~pEi 223 (352)
T 2nqt_A 145 DQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEI 223 (352)
T ss_dssp HHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGSHHHHTTCCEECSTTTTSTTHHHH
T ss_pred HHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCccccccccHHHHhhhcccccCCCcceecHHH
Confidence 9987 46899999999999999999999999999 9999999999999 77777777778877778999998 4311 1
Q ss_pred HHHHHHhccccCCceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhccc-ccCcCcccccCCCceeecCCCCCcc
Q 015637 281 AKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESAD-NELKGILSVCDEPLVSVDFRCSDVS 359 (403)
Q Consensus 281 akav~kVlPeL~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa~-~~lkgil~~~~~p~VS~D~~~~~~s 359 (403)
..++.|++. .+.+++++|+|||+++||+++++++++++ .|||+++|+++-+ .|+=-++.-.+-|-. .+..|..+-
T Consensus 224 ~~e~~ki~~-~~~~v~ft~~rvP~~rG~~~ti~~~l~~~--~~ei~~~~~~~y~~~~~V~v~~~~~~p~~-~~v~g~n~~ 299 (352)
T 2nqt_A 224 AQGLRAVTD-RDVSVSFTPVLIPASRGILATCTARTRSP--LSQLRAAYEKAYHAEPFIYLMPEGQLPRT-GAVIGSNAA 299 (352)
T ss_dssp HHHHHTTCS-SCCEEEEEEEECSCSSCEEEEEEEECCSC--HHHHHHHHHHHHTTCTTEEECCTTCCCCG-GGTTTSSCE
T ss_pred HHHHHHHhC-CCCCEEEEEEEEccccEEEEEEEEEECCC--HHHHHHHHHHhhCCCCCEEEeCCCCCcCh-HHhcCCcEE
Confidence 134456665 36789999999999999999999999988 9999999998632 232222211111211 144444433
Q ss_pred eeeeCCCccccCCceEEEEEEecCC-cchhhhHhHHHHHH
Q 015637 360 STVDSSLTLVMGDDMVKVIAWYDNE-WGYSQRVVDLADIV 398 (403)
Q Consensus 360 ~i~d~~~~~~~~~~~~K~~~WyDNE-~gys~r~vdl~~~~ 398 (403)
.|- ...-..++.+.+++=-||= +|=|-.-|-.++.|
T Consensus 300 ~ig---~~~d~~~~~l~~~~~~DNL~KGAAg~AVQ~~nl~ 336 (352)
T 2nqt_A 300 HIA---VAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLA 336 (352)
T ss_dssp EEE---EEEETTTTEEEEEEEECTTTTTTHHHHHHHHHHH
T ss_pred EEE---EEEeCCCCEEEEEEEEcchhHhHHHHHHHHHHHH
Confidence 331 0000122445666667884 46555555555554
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.96 E-value=1.9e-29 Score=252.86 Aligned_cols=227 Identities=11% Similarity=0.070 Sum_probs=173.7
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+| +|.+|+.++|+|.+|| +++|+.+...-. .-.+|++.|..|.. .+.+ ++
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP--~~el~~l~S~~~-----aG~~~~~~~p~~~~---------------~l~~-~~ 69 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHP--EAKITYLSSRTY-----AGKKLEEIFPSTLE---------------NSIL-SE 69 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCT--TEEEEEEECSTT-----TTSBHHHHCGGGCC---------------CCBC-BC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCC--CcEEEEEeCccc-----ccCChHHhChhhcc---------------CceE-Ee
Confidence 48999999 9999999999999997 599998875211 11223444444321 1222 12
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC---C--CC-----------------CeEEeecC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK---G--DI-----------------PTYVVGVN 204 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~---~--dv-----------------p~vV~gVN 204 (403)
.+++++ | .++|+||+|+|...++++++.+ +|+ +||+++++ + ++ |..+||+|
T Consensus 70 ~~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n 142 (351)
T 1vkn_A 70 FDPEKV-S--KNCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELH 142 (351)
T ss_dssp CCHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHH
T ss_pred CCHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccC
Confidence 233332 2 3799999999999999999877 677 79999874 2 21 78888999
Q ss_pred ccCCCCCCCeEecCCchhhhHHHHHHHHHhhcCee--EEEEeeeeccccchh-hhhhchhhhhhhHhhhcccCCCCCCh-
Q 015637 205 ADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGII--KGTMTTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTGA- 280 (403)
Q Consensus 205 ~~~~~~~~~IISnaSCTTn~Lap~lk~L~~~fGI~--~~~~TTiha~tg~q~-~~D~~~~d~r~~r~~a~NIIP~~tGa- 280 (403)
.+.+.. .+||+||+|+|+|+++.|+||+++++|+ ++.++|+|++||+++ ..+..+. ..+..|+.|+..+.
T Consensus 143 ~e~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~~-----~e~~~n~~~y~~~~h 216 (351)
T 1vkn_A 143 REEIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYLF-----SEVNESLRPYNVAKH 216 (351)
T ss_dssp HHHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGBH-----HHHTTCCEECSCSCC
T ss_pred HHHhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccccch-----hHHhcccccCCcccc
Confidence 998874 5899999999999999999999999999 999999999999976 4444332 13457788876552
Q ss_pred ------HHHHHHhccccCCceeEEEEecccccccEEEEEEEEccCCCHHHHHHHHHhcc
Q 015637 281 ------AKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESA 333 (403)
Q Consensus 281 ------akav~kVlPeL~gkl~~~avRVPv~~gs~~dl~v~~~k~~s~eeI~~al~~aa 333 (403)
.++++|++.+ +.+++.+|+|||+++||++.++++++ ++.||++++|+++-
T Consensus 217 ~h~pEi~~el~~i~~~-~~~v~ftp~rvPv~rG~~~tv~v~l~--~~~eei~~~l~~~Y 272 (351)
T 1vkn_A 217 RHVPEMEQELGKISGK-KVNVVFTPHLVPMTRGILSTIYVKTD--KSLEEIHEAYLEFY 272 (351)
T ss_dssp THHHHHHHHHHHHHTS-CCEEEEEEEEESSSSCEEEEEEEECS--SCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhhCC-CCCEEEEEEEeccccEEEEEEEEEEc--CCHHHHHHHHHHhh
Confidence 2344556542 45799999999999999999999998 89999999999753
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.69 E-value=5.2e-08 Score=95.80 Aligned_cols=150 Identities=22% Similarity=0.215 Sum_probs=96.0
Q ss_pred ceeEEEEccChhHHHHHHHHHc-CCCCCceEEEEecCCChhH-HhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHG-RKDSPLEVVAINDTGGVKQ-ASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~-~~~~~~evvaInd~~~~~~-~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
++||||+|+|.||+.+++.|.+ ++ .++++++.|. +++. ...+. ..+|. .. +
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~--~~elvav~d~-~~~~~~~~~a---~~~g~---~~---------~--------- 56 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAK--YLEMGAMVGI-DAASDGLARA---QRMGV---TT---------T--------- 56 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCS--SEEEEEEECS-CTTCHHHHHH---HHTTC---CE---------E---------
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCc--CeEEEEEEeC-ChhhhHHHHH---HHcCC---Cc---------c---------
Confidence 5899999999999999999976 54 4999999884 2221 10111 00110 00 0
Q ss_pred cCCCCCC----CCCCcCccEEeeCCCCcCCHhhHHHHHHc--CCCeEEEcCCCCCCCCeEEeecCccCCCC--CCCeEec
Q 015637 146 NRNPVNL----PWGDLGIDLVIEGTGVFVDREGAGKHIQA--GAKKVLITAPGKGDIPTYVVGVNADAYKP--DEPIISN 217 (403)
Q Consensus 146 ~~dp~~i----~w~~~gvDiV~e~tG~f~s~~~a~~hl~a--GakkVIIsaps~~dvp~vV~gVN~~~~~~--~~~IISn 217 (403)
..+.+++ +| .++|+||+|||.....+.+...+++ |. .||+..+.--.|..++++|.+.+.. ...++++
T Consensus 57 ~~~~e~ll~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~ 132 (312)
T 1nvm_B 57 YAGVEGLIKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTC 132 (312)
T ss_dssp SSHHHHHHHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTCSSCBCCHHHHTTTTTTCSEEECCCH
T ss_pred cCCHHHHHhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCcccccccccCccCHHHHHhccCCcEEEe
Confidence 0111111 12 2799999999988888999999988 76 5555432212477788889887642 1357777
Q ss_pred CCchhhhHHHHHHHHHhhcCeeEE-EEeeeecccc
Q 015637 218 ASCTTNCLAPFVKVLDQKFGIIKG-TMTTTHSYTG 251 (403)
Q Consensus 218 aSCTTn~Lap~lk~L~~~fGI~~~-~~TTiha~tg 251 (403)
+.|.+ .|++..+.+.|..... .+.++++.+.
T Consensus 133 ~g~~~---ipl~~a~~~~~~~~~~~iv~~i~sgs~ 164 (312)
T 1nvm_B 133 GGQAT---IPMVAAVSRVAKVHYAEIVASISSKSA 164 (312)
T ss_dssp HHHHH---HHHHHHHHTTSCEEEEEEEEEEEGGGS
T ss_pred CCccc---chHHHHhhhhccchhHhHhhhhhcccc
Confidence 77754 5666677777765433 5778877663
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.54 E-value=0.00012 Score=71.69 Aligned_cols=88 Identities=17% Similarity=0.182 Sum_probs=61.5
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||+|+|++|+.+++.+.+.+ +++++++.|....+ + .. + | +.++ .
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~--~~elvav~d~~~~~-------------------~-~~-----~-g--v~~~--~ 50 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQP--DMDLVGIFSRRATL-------------------D-TK-----T-P--VFDV--A 50 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCS--SEEEEEEEESSSCC-------------------S-SS-----S-C--EEEG--G
T ss_pred CCEEEEEeecHHHHHHHHHHhcCC--CCEEEEEEcCCHHH-------------------h-hc-----C-C--Ccee--C
Confidence 689999999999999999998765 49999998741111 0 00 0 1 1221 2
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
|.+++- .++|+|++||+.....+.+...+++|. .||++.|
T Consensus 51 d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp 90 (320)
T 1f06_A 51 DVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYD 90 (320)
T ss_dssp GGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCC
T ss_pred CHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCC
Confidence 333332 278999999999888888888998875 5666555
No 47
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.51 E-value=0.00017 Score=70.13 Aligned_cols=98 Identities=22% Similarity=0.260 Sum_probs=64.9
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
|++||||+|+|.||+.+++.+...+...++|++|.|. +++....+.+ .||. . + ++
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~-~~~~a~~~a~---~~~~---~-~---------------~~-- 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR-DLSRAKEFAQ---KHDI---P-K---------------AY-- 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS-SHHHHHHHHH---HHTC---S-C---------------EE--
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC-CHHHHHHHHH---HcCC---C-c---------------cc--
Confidence 7799999999999999999998665334899999884 4433222211 1110 0 0 01
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+-||....-.+.+...+++| |.|++--|
T Consensus 56 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP 98 (334)
T 3ohs_X 56 GSYEELA-KDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKP 98 (334)
T ss_dssp SSHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECC
Confidence 1111110 1126899999999999889999999998 56777655
No 48
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.43 E-value=0.00029 Score=68.32 Aligned_cols=94 Identities=22% Similarity=0.306 Sum_probs=64.1
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
|++||||+|+|.+|+..++.|...+ .+++++|.|. +++....+.+ .+| +. +
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~~~---~~~--------------------~~-~-- 52 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNA--DARLVAVADA-FPAAAEAIAG---AYG--------------------CE-V-- 52 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCT--TEEEEEEECS-SHHHHHHHHH---HTT--------------------CE-E--
T ss_pred CceEEEEECCCHHHHHHHHHHhhCC--CcEEEEEECC-CHHHHHHHHH---HhC--------------------CC-c--
Confidence 7799999999999999999998865 4999999884 4443322211 000 00 0
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+++++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 53 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 95 (331)
T 4hkt_A 53 RTIDAIE-AAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKP 95 (331)
T ss_dssp CCHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecC
Confidence 1121110 1126899999999998889999999988 56777655
No 49
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.37 E-value=0.0004 Score=67.85 Aligned_cols=97 Identities=23% Similarity=0.298 Sum_probs=64.8
Q ss_pred CceeEEEEccChhHHHHHHHHH-cCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWH-GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~-~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
|++||||+|+|.+|+..++.+. ..+ .+++++|.|. +++....+.+ .+|. .. .++
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~--~~~l~av~d~-~~~~~~~~~~---~~g~---~~---------------~~~- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLS--GAEIVAVTDV-NQEAAQKVVE---QYQL---NA---------------TVY- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCS--SEEEEEEECS-SHHHHHHHHH---HTTC---CC---------------EEE-
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCC--CcEEEEEEcC-CHHHHHHHHH---HhCC---CC---------------eee-
Confidence 6799999999999999999998 544 4999999884 4433222211 1110 00 111
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+++++- .+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 56 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP 98 (344)
T 3mz0_A 56 -PNDDSLL-ADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKP 98 (344)
T ss_dssp -SSHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCC
Confidence 1222210 1126899999999998889999999998 56777655
No 50
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.34 E-value=0.00034 Score=68.35 Aligned_cols=96 Identities=22% Similarity=0.289 Sum_probs=64.1
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
|++||||+|+|.+|+..++.|...+ .+++++|.|. +++....+.+ .+|. . .++
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~~~---~~~~----~---------------~~~-- 53 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMID--DAILYAISDV-REDRLREMKE---KLGV----E---------------KAY-- 53 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGST--TEEEEEEECS-CHHHHHHHHH---HHTC----S---------------EEE--
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCC--CcEEEEEECC-CHHHHHHHHH---HhCC----C---------------cee--
Confidence 6799999999999999999998765 4999999885 4443322221 1110 0 011
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 54 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 96 (344)
T 3ezy_A 54 KDPHELI-EDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKP 96 (344)
T ss_dssp SSHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred CCHHHHh-cCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECC
Confidence 1222210 1126899999999988888899999988 56777655
No 51
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.31 E-value=0.0002 Score=70.32 Aligned_cols=96 Identities=26% Similarity=0.288 Sum_probs=62.7
Q ss_pred CceeEEEEccChhHH-HHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInGfGrIGr-~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
|++||||+|+|.+|+ ..++++...+ .++|++|-|....+..+. + +|.. | +.++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~--~~~l~av~d~~~~~~~a~--~----~~~~---------------~--~~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRE--TLEVKTIFDLHVNEKAAA--P----FKEK---------------G--VNFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCT--TEEEEEEECTTCCHHHHH--H----HHTT---------------T--CEEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCC--CeEEEEEECCCHHHHHHH--h----hCCC---------------C--CeEE-
Confidence 789999999999998 6777777654 499999988421111110 0 1100 0 0111
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (349)
T 3i23_A 55 -ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKP 97 (349)
T ss_dssp -SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECC
Confidence 2233321 1236899999999998889999999998 56777544
No 52
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.31 E-value=0.00043 Score=67.18 Aligned_cols=86 Identities=20% Similarity=0.214 Sum_probs=57.5
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||+|+|.||+.+++.+.+.+ +++|++|.|. +++.+.. +|. . ...+ .
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~--~~elvav~d~-~~~~~~~-------~g~-----~-------------~~~~--~ 58 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAP--DFEIAGIVRR-NPAEVPF-------ELQ-----P-------------FRVV--S 58 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT--TEEEEEEECC---------------CCT-----T-------------SCEE--S
T ss_pred CCEEEEECChHHHHHHHHHHhcCC--CCEEEEEEcC-CHHHHHH-------cCC-----C-------------cCCH--H
Confidence 589999999999999999998765 4999998874 2321110 110 0 0001 2
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEE
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVII 188 (403)
+..+. .++|+|+.||+.....+.+...+++|. .||.
T Consensus 59 ~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ 94 (304)
T 3bio_A 59 DIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTAD 94 (304)
T ss_dssp SGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEE
T ss_pred HHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEE
Confidence 22222 278999999999988888888888875 4444
No 53
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.27 E-value=0.00062 Score=67.13 Aligned_cols=97 Identities=27% Similarity=0.303 Sum_probs=64.0
Q ss_pred CceeEEEEccChhHHHHHHHHH-cCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWH-GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~-~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
|++||||+|+|.||+..++.|. ..+ .+++++|-|. +++....+.+ .+|. .+ ..+
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~--~~~lvav~d~-~~~~~~~~a~---~~g~---~~---------------~~~- 76 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVS--GVEVVAVCDI-VAGRAQAALD---KYAI---EA---------------KDY- 76 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCT--TEEEEEEECS-STTHHHHHHH---HHTC---CC---------------EEE-
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCC--CcEEEEEEeC-CHHHHHHHHH---HhCC---CC---------------eee-
Confidence 4789999999999999999998 544 4999999884 3332211111 0110 00 111
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+-||+...-.+.+...+++| |.|++--|
T Consensus 77 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 119 (357)
T 3ec7_A 77 -NDYHDLI-NDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKP 119 (357)
T ss_dssp -SSHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecC
Confidence 1222210 1126899999999999999999999998 56777555
No 54
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.24 E-value=0.001 Score=65.27 Aligned_cols=92 Identities=26% Similarity=0.378 Sum_probs=63.0
Q ss_pred ceeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.+|+. .++++...+ .++|++|.|. +++... -+| .+ ++ ++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~--~~~l~av~d~-~~~~~~--~~~-------~~-~~---------------~~-- 56 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTP--GLELAGVSSS-DASKVH--ADW-------PA-IP---------------VV-- 56 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTST--TEEEEEEECS-CHHHHH--TTC-------SS-CC---------------EE--
T ss_pred CceEEEECCCHHHHHHHHHHHhhCC--CcEEEEEECC-CHHHHH--hhC-------CC-Cc---------------eE--
Confidence 589999999999997 788887765 4999999985 444321 011 00 01 11
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.|.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 57 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 57 SDPQMLF-NDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp SCHHHHH-HCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 1222221 1236899999999999899999999998 56777555
No 55
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.23 E-value=0.00072 Score=65.94 Aligned_cols=94 Identities=24% Similarity=0.356 Sum_probs=64.4
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||+|+|.+|+..++.|...+ .+++++|.|. +++....+.+ .+| + .++ .
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~a~---~~g-----~---------------~~~--~ 55 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANP--DLELVVIADP-FIEGAQRLAE---ANG-----A---------------EAV--A 55 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT--TEEEEEEECS-SHHHHHHHHH---TTT-----C---------------EEE--S
T ss_pred ceEEEEECCcHHHHHHHHHHHhCC--CcEEEEEECC-CHHHHHHHHH---HcC-----C---------------cee--C
Confidence 589999999999999999998875 4999999884 4433222211 011 0 111 2
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+++++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|
T Consensus 56 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 97 (344)
T 3euw_A 56 SPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERG-IPALCEKP 97 (344)
T ss_dssp SHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTT-CCEEECSC
T ss_pred CHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcC-CcEEEECC
Confidence 22221 11236899999999998889999999998 46777655
No 56
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.17 E-value=0.00052 Score=67.13 Aligned_cols=95 Identities=23% Similarity=0.297 Sum_probs=60.2
Q ss_pred CceeEEEEccChhHHH-HHH-HHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEE
Q 015637 67 AKLKVAINGFGRIGRN-FLR-CWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (403)
Q Consensus 67 m~ikVaInGfGrIGr~-vlr-~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~ 144 (403)
|++||||+|+|.+|+. .++ ++...+ .++|++|-|. +++.. ..++ ++ .| +.++
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~~~--~~~l~av~d~-~~~~~-~~~~------~~--------------~~--~~~~ 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNRKD--SWHVAHIFRR-HAKPE-EQAP------IY--------------SH--IHFT 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTCTT--TEEEEEEECS-SCCGG-GGSG------GG--------------TT--CEEE
T ss_pred CceEEEEEecCHHHHHHHHHHHHhcCC--CeEEEEEEcC-CHhHH-HHHH------hc--------------CC--CceE
Confidence 6799999999999996 667 444443 4999999884 22211 1110 00 01 1121
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+++++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 --~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (345)
T 3f4l_A 55 --SDLDEVL-NDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKP 97 (345)
T ss_dssp --SCTHHHH-TCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred --CCHHHHh-cCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCC
Confidence 2333321 1236899999999998889999999998 56666544
No 57
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.16 E-value=0.00053 Score=67.88 Aligned_cols=87 Identities=24% Similarity=0.286 Sum_probs=57.4
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCC------CceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDS------PLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVI 141 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~------~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I 141 (403)
++||||.|+|.||+.+++.+.++++. +++|++|.|. +++ + . .+ + +..
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~-~~~------~-~--~~-~--------------~~~-- 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR-DPR------K-P--RA-I--------------PQE-- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS-CTT------S-C--CS-S--------------CGG--
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC-CHH------H-h--hc-c--------------Ccc--
Confidence 58999999999999999999876410 3899999874 111 0 0 00 0 000
Q ss_pred EEEecCCCCCCCCCCcCccEEeeCCCCc-CCHhhHHHHHHcCCCeEEEc
Q 015637 142 QVVSNRNPVNLPWGDLGIDLVIEGTGVF-VDREGAGKHIQAGAKKVLIT 189 (403)
Q Consensus 142 ~v~~~~dp~~i~w~~~gvDiV~e~tG~f-~s~~~a~~hl~aGakkVIIs 189 (403)
.++ .|++++- ++|+|++|||.. ...+.+...+++|. -|++
T Consensus 56 ~~~--~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVt 96 (332)
T 2ejw_A 56 LLR--AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLIT 96 (332)
T ss_dssp GEE--SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEE
T ss_pred ccc--CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEE
Confidence 011 3555543 689999999876 34567778898875 4454
No 58
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.15 E-value=0.0011 Score=65.20 Aligned_cols=92 Identities=25% Similarity=0.313 Sum_probs=62.7
Q ss_pred ceeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.+|+. .++++...+ .++|++|.|. +++..+. +|. + + .++
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~--~~~l~av~d~-~~~~~~~--~~~-------~-~---------------~~~-- 54 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLD--EYQISKIMTS-RTEEVKR--DFP-------D-A---------------EVV-- 54 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCT--TEEEEEEECS-CHHHHHH--HCT-------T-S---------------EEE--
T ss_pred cceEEEEccCHHHHHHHHHHHhhCC--CeEEEEEEcC-CHHHHHh--hCC-------C-C---------------ceE--
Confidence 489999999999997 678877664 4999999985 3432211 110 0 1 111
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (358)
T 3gdo_A 55 HELEEIT-NDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKP 97 (358)
T ss_dssp SSTHHHH-TCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecC
Confidence 2232221 1236899999999999999999999998 56777555
No 59
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.11 E-value=0.00053 Score=67.44 Aligned_cols=96 Identities=22% Similarity=0.242 Sum_probs=62.9
Q ss_pred cC-ceeEEEEccChhHH-HHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEE
Q 015637 66 QA-KLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (403)
Q Consensus 66 ~m-~ikVaInGfGrIGr-~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v 143 (403)
.| ++||||+|+|.||+ .+++.|...+ .++|++|-|. +++....+.+ .+| + ..
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~a~---~~g-----~---------------~~ 77 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEP--LTEVTAIASR-RWDRAKRFTE---RFG-----G---------------EP 77 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCT--TEEEEEEEES-SHHHHHHHHH---HHC-----S---------------EE
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCC--CeEEEEEEcC-CHHHHHHHHH---HcC-----C---------------CC
Confidence 34 68999999999998 7899998765 4999999874 4433222211 011 0 11
Q ss_pred EecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 144 ~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+ .+.+++- .+.++|+|+-||....-.+.+...+++|. .|++--|
T Consensus 78 ~--~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 121 (350)
T 3rc1_A 78 V--EGYPALL-ERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKP 121 (350)
T ss_dssp E--ESHHHHH-TCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred c--CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCC
Confidence 1 1222210 12368999999999998899999999884 5776555
No 60
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.11 E-value=0.00038 Score=67.76 Aligned_cols=97 Identities=18% Similarity=0.246 Sum_probs=59.5
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
|++||+|+| +|++||.+++++.+.+ +++||++-|..+.+. .-.|. |.+.+- .. .| +.++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~--~~eLvg~vd~~~~~~----~G~d~--gel~G~----~~-----~g--v~v~- 79 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRK--DVELCAVLVRKGSSF----VDKDA--SILIGS----DF-----LG--VRIT- 79 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCS--SEEEEEEBCCTTCTT----TTSBG--GGGTTC----SC-----CS--CBCB-
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEecCCccc----cccch--HHhhcc----Cc-----CC--ceee-
Confidence 468999999 9999999999998876 499999977422110 00011 111000 00 01 2221
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEE
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVII 188 (403)
.|++++- .++|+|||+|......+.+...+++|.. +||
T Consensus 80 -~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 80 -DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp -SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred -CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 2333321 1689999999766666777888888873 455
No 61
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.10 E-value=0.00072 Score=66.27 Aligned_cols=95 Identities=16% Similarity=0.173 Sum_probs=64.2
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
|++||||+|+|.+|+..++.+...+ .++|++|-|. +++....+.+ .+| ++ . .
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~--~~~lvav~d~-~~~~~~~~~~---~~g-----~~---------------~--~ 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSE--KLKLVTCYSR-TEDKREKFGK---RYN-----CA---------------G--D 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCS--SEEEEEEECS-SHHHHHHHHH---HHT-----CC---------------C--C
T ss_pred CcceEEEEccCHHHHHHHHHHHhCC--CcEEEEEECC-CHHHHHHHHH---HcC-----CC---------------C--c
Confidence 4689999999999999999998765 4999999884 4443322211 011 01 0 0
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+++++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 56 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 98 (354)
T 3db2_A 56 ATMEALL-AREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKP 98 (354)
T ss_dssp SSHHHHH-HCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccC
Confidence 1111110 1236899999999998889999999988 46777655
No 62
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.09 E-value=0.0014 Score=64.72 Aligned_cols=93 Identities=23% Similarity=0.267 Sum_probs=63.5
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||+|+|.||+..++.+...+ .++|++|.|. +++.....-+|+ ++ ++ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~--~~~l~av~d~-~~~~~~~a~~~g---------~~---------------~~--~ 55 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAAD--NLEVHGVFDI-LAEKREAAAQKG---------LK---------------IY--E 55 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTST--TEEEEEEECS-SHHHHHHHHTTT---------CC---------------BC--S
T ss_pred cCcEEEECcCHHHHHHHHHHHhCC--CcEEEEEEcC-CHHHHHHHHhcC---------Cc---------------ee--C
Confidence 589999999999999999988765 4999999884 444322111111 01 00 1
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+.+++ ..+.++|+|+-||+...-.+.+...+++| |.|++--|
T Consensus 56 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP 97 (359)
T 3e18_A 56 SYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKP 97 (359)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCC
Confidence 11111 01126899999999998889999999988 46777555
No 63
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.09 E-value=0.0011 Score=68.10 Aligned_cols=94 Identities=23% Similarity=0.303 Sum_probs=60.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCC-------CCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRK-------DSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKV 140 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~-------~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~ 140 (403)
++||||.|+|.||+.+++.|.++. ..+++|++|.+. +++....++ + +.
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~-~~~~~~~~~--~--------------~~-------- 64 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR-NLDKAEALA--G--------------GL-------- 64 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS-CHHHHHHHH--T--------------TC--------
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC-CHHHhhhhc--c--------------cC--------
Confidence 589999999999999999886420 125999999985 332211111 0 00
Q ss_pred EEEEecCCCCCCCCCCcCccEEeeCCCC-cCCHhhHHHHHHcCCCeEEEcCC
Q 015637 141 IQVVSNRNPVNLPWGDLGIDLVIEGTGV-FVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 141 I~v~~~~dp~~i~w~~~gvDiV~e~tG~-f~s~~~a~~hl~aGakkVIIsap 191 (403)
.++ .|++++ ..+.++|+|++|||. ....+.+...+++|. .|+..+|
T Consensus 65 -~~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 65 -PLT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp -CEE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred -ccc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 011 122221 112368999999985 677788889999885 4555455
No 64
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.07 E-value=0.001 Score=64.67 Aligned_cols=95 Identities=23% Similarity=0.220 Sum_probs=63.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||+|+|.+|+.+++.|.+.+ .++|++|-|. +++....+.+ .+|. . + ++ .
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~~~---~~~~---~-~---------------~~--~ 57 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESA--QAEVRGIASR-RLENAQKMAK---ELAI---P-V---------------AY--G 57 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSS--SEEEEEEBCS-SSHHHHHHHH---HTTC---C-C---------------CB--S
T ss_pred eEEEEEECchHHHHHHHHHHHhCC--CcEEEEEEeC-CHHHHHHHHH---HcCC---C-c---------------ee--C
Confidence 589999999999999999998865 4999999884 3332222211 0110 0 0 00 1
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+.+++- .+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 58 ~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 99 (330)
T 3e9m_A 58 SYEELC-KDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLLEKP 99 (330)
T ss_dssp SHHHHH-HCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEECSS
T ss_pred CHHHHh-cCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEEeCC
Confidence 111110 1126899999999998889899999988 46777655
No 65
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.05 E-value=0.00051 Score=66.21 Aligned_cols=95 Identities=21% Similarity=0.219 Sum_probs=58.3
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||+|+| +|++||.+++++.+++ +++||++-|..+.+. .|+--+.+ .+- . .| +.++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~--~~eLv~~~d~~~~~~----------~G~d~gel---~g~--~-~g--v~v~-- 64 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAP--DATLVGALDRTGSPQ----------LGQDAGAF---LGK--Q-TG--VALT-- 64 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCT--TEEEEEEBCCTTCTT----------TTSBTTTT---TTC--C-CS--CBCB--
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEEecCccc----------ccccHHHH---hCC--C-CC--ceec--
Confidence 48999999 9999999999998876 499999876421110 01100110 000 0 01 1121
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEE
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVII 188 (403)
.|++++- .++|+|||+|......+.+...+++|.+ +||
T Consensus 65 ~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVi 102 (272)
T 4f3y_A 65 DDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVI 102 (272)
T ss_dssp CCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 2222211 1579999999776667778888888874 555
No 66
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.05 E-value=0.0018 Score=63.97 Aligned_cols=92 Identities=18% Similarity=0.306 Sum_probs=62.0
Q ss_pred ceeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.+|+. .++++...+ .++|++|.|. +++.... +| .+ ++ ++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~--~~~l~av~d~-~~~~~~~--~~-------~~-~~---------------~~-- 56 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVP--GLNLAFVASR-DEEKVKR--DL-------PD-VT---------------VI-- 56 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTST--TEEEEEEECS-CHHHHHH--HC-------TT-SE---------------EE--
T ss_pred cceEEEECCCHHHHHHHHHHHhhCC--CeEEEEEEcC-CHHHHHh--hC-------CC-Cc---------------EE--
Confidence 589999999999996 788887765 4999999985 3433211 11 00 11 11
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 57 ~~~~~ll-~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 99 (364)
T 3e82_A 57 ASPEAAV-QHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKP 99 (364)
T ss_dssp SCHHHHH-TCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCC
Confidence 1222211 1236899999999999899999999998 46666544
No 67
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.03 E-value=0.001 Score=65.59 Aligned_cols=36 Identities=25% Similarity=0.535 Sum_probs=30.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcC----CCCCceEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGR----KDSPLEVVAINDT 103 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~----~~~~~evvaInd~ 103 (403)
++||||.|+|.||+.+++.|.++ ...+++|++|.|.
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 58999999999999999999864 0124999999885
No 68
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.97 E-value=0.0018 Score=62.56 Aligned_cols=93 Identities=23% Similarity=0.295 Sum_probs=62.4
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~d 148 (403)
+||||+|+|.+|+.+++.|...+ .+++++|-|. +++....+.+ .+|. ..++ .+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~--~~~~~~v~d~-~~~~~~~~~~---~~~~-------------------~~~~--~~ 54 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSG--EYQLVAIYSR-KLETAATFAS---RYQN-------------------IQLF--DQ 54 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--SEEEEEEECS-SHHHHHHHGG---GSSS-------------------CEEE--SC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCC--CeEEEEEEeC-CHHHHHHHHH---HcCC-------------------CeEe--CC
Confidence 79999999999999999998764 4999999874 3433221111 1110 0111 23
Q ss_pred CCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 149 p~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
++++- +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 55 ~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP 94 (325)
T 2ho3_A 55 LEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKP 94 (325)
T ss_dssp HHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred HHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecC
Confidence 33321 2368999999998888888888999884 5666544
No 69
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.90 E-value=0.0011 Score=61.57 Aligned_cols=135 Identities=17% Similarity=0.245 Sum_probs=76.6
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~d 148 (403)
|||||+|+|++|+.+++.|... .++++++-|... + .+ . .+ .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~---g~~lv~v~d~~~-~---------------------~~-~----------~~--~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN---GFEIAAILDVRG-E---------------------HE-K----------MV--RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECSSC-C---------------------CT-T----------EE--SS
T ss_pred CEEEEECCCHHHHHHHHHHhcC---CCEEEEEEecCc-c---------------------hh-h----------hc--CC
Confidence 5899999999999999998853 389988876311 0 00 0 11 23
Q ss_pred CCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCC-CCCCeEecCCchhhhHHH
Q 015637 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYK-PDEPIISNASCTTNCLAP 227 (403)
Q Consensus 149 p~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~-~~~~IISnaSCTTn~Lap 227 (403)
++++-- .++|+|++|++.....+.+...+++|. .||+..|...+.+-...++- +... ....++-.+++... ..
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~~ 116 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAFADRDFLSRVR-EVCRKTGRRVYIASGAIGG--LD 116 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGGGSHHHHHHHH-HHHHHHCCCEEECCTTCSC--HH
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccCChHHHHHHHH-HHHHhcCCeEEecCccccC--hH
Confidence 333211 278999999998888888888888886 33333332111110000110 0000 01233333333322 23
Q ss_pred HHHHHHhhcCeeEEEEeeeecc
Q 015637 228 FVKVLDQKFGIIKGTMTTTHSY 249 (403)
Q Consensus 228 ~lk~L~~~fGI~~~~~TTiha~ 249 (403)
.++.... |+++..++++|+.
T Consensus 117 ~~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 117 AIFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHTGG--GEEEEEEEEEEEG
T ss_pred HHHHhhc--cccEEEEEEEcCh
Confidence 4454443 8999999998865
No 70
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.90 E-value=0.0014 Score=52.60 Aligned_cols=97 Identities=20% Similarity=0.228 Sum_probs=58.6
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
|.+||+|.|.|.||+.+++.|..++ ..+|+.++. +++.+..+.... +. . .....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g--~~~v~~~~r--~~~~~~~~~~~~---------~~------~-------~~~d~ 57 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSS--NYSVTVADH--DLAALAVLNRMG---------VA------T-------KQVDA 57 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCS--SEEEEEEES--CHHHHHHHHTTT---------CE------E-------EECCT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCC--CceEEEEeC--CHHHHHHHHhCC---------Cc------E-------EEecC
Confidence 4579999999999999999998864 367766653 333332221100 00 0 00011
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEc
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIs 189 (403)
.+++.+.-.-.++|+||.|+|.......+...++.|.+.+.++
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred CCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 1111111001278999999998877777778888888665444
No 71
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.89 E-value=0.0018 Score=63.68 Aligned_cols=98 Identities=16% Similarity=0.218 Sum_probs=62.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||+|+|.||+.+++.|...+ .+++++|.|. +++....+. ..+|. +... .++ .
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~--~~~lv~v~d~-~~~~~~~~a---~~~~~-~~~~---------------~~~--~ 61 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAP--NATISGVASR-SLEKAKAFA---TANNY-PEST---------------KIH--G 61 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCT--TEEEEEEECS-SHHHHHHHH---HHTTC-CTTC---------------EEE--S
T ss_pred ceEEEEECchHHHHHHHHHHhhCC--CcEEEEEEcC-CHHHHHHHH---HHhCC-CCCC---------------eee--C
Confidence 589999999999999999998765 4999999884 443322211 11110 0000 111 1
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+.+++- .+.++|+|+.||......+.+...+++|. .|++--|
T Consensus 62 ~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP 103 (362)
T 1ydw_A 62 SYESLL-EDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKP 103 (362)
T ss_dssp SHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSS
T ss_pred CHHHHh-cCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 222210 11268999999998888888888998884 5666444
No 72
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.85 E-value=0.0028 Score=61.45 Aligned_cols=95 Identities=22% Similarity=0.249 Sum_probs=61.3
Q ss_pred ceeEEEEccChhHHHHHHHHH-cCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWH-GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~-~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.||+..++.|. ..+ .+++++|.|. +++....+.+ .+|. . .++
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~--~~~~vav~d~-~~~~~~~~a~---~~g~---~----------------~~~-- 60 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQ--GVKLVAACAL-DSNQLEWAKN---ELGV---E----------------TTY-- 60 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCS--SEEEEEEECS-CHHHHHHHHH---TTCC---S----------------EEE--
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCC--CcEEEEEecC-CHHHHHHHHH---HhCC---C----------------ccc--
Confidence 589999999999999999988 554 4999999884 3433221111 0110 0 011
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+.||+.....+.+...+++| |.|++-.|
T Consensus 61 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKp 103 (346)
T 3cea_A 61 TNYKDMI-DTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEKP 103 (346)
T ss_dssp SCHHHHH-TTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcCC
Confidence 1222110 1126899999999988888888899988 45665434
No 73
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.85 E-value=0.0016 Score=63.12 Aligned_cols=95 Identities=19% Similarity=0.223 Sum_probs=61.9
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||+|+|.||+.+++.+...+ .+++++|.|. +++....+. ..+|. . ..+ .
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~--~~~~~av~d~-~~~~~~~~a---~~~~~-----------------~--~~~--~ 57 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAG--NGEVVAVSSR-TLESAQAFA---NKYHL-----------------P--KAY--D 57 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHC--SEEEEEEECS-CSSTTCC------CCCC-----------------S--CEE--S
T ss_pred ceEEEEEechHHHHHHHHHHHhCC--CcEEEEEEcC-CHHHHHHHH---HHcCC-----------------C--ccc--C
Confidence 589999999999999999988764 4999999874 222111110 00100 0 011 1
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 58 ~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 99 (329)
T 3evn_A 58 KLEDML-ADESIDVIYVATINQDHYKVAKAALLAG-KHVLVEKP 99 (329)
T ss_dssp CHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEccC
Confidence 222221 1236899999999988889999999988 46777655
No 74
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.83 E-value=0.0014 Score=63.13 Aligned_cols=92 Identities=15% Similarity=0.223 Sum_probs=59.8
Q ss_pred ceeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.+|+. +++.|...+ .+++++|-|. +++....+.+ .+| + .+ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~--~~~lvav~d~-~~~~~~~~~~---~~g-----~---------------~~--~ 56 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAAS--DWTLQGAWSP-TRAKALPICE---SWR-----I---------------PY--A 56 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCS--SEEEEEEECS-SCTTHHHHHH---HHT-----C---------------CB--C
T ss_pred cceEEEECCCHHHHHHHHHHHHhCC--CeEEEEEECC-CHHHHHHHHH---HcC-----C---------------Cc--c
Confidence 489999999999997 889887754 4999999874 2221111110 011 0 01 0
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+++.+ +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 57 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 57 DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 122222 1368999999998888888888899874 4666444
No 75
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.80 E-value=0.0016 Score=63.78 Aligned_cols=95 Identities=19% Similarity=0.250 Sum_probs=64.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||+|+|.+|+..++.+...+ +.+++++|.|. +++....+.+ .+| +..+ .
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~~~---~~~--------------------~~~~--~ 65 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHA-DRAELIDVCDI-DPAALKAAVE---RTG--------------------ARGH--A 65 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTT-TTEEEEEEECS-SHHHHHHHHH---HHC--------------------CEEE--S
T ss_pred cceEEEEcCcHHHHHHHHHHHhCC-CCeEEEEEEcC-CHHHHHHHHH---HcC--------------------Ccee--C
Confidence 589999999999999999998862 24999999884 4443222211 011 0111 2
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+++++ ..+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 66 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 107 (354)
T 3q2i_A 66 SLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKP 107 (354)
T ss_dssp CHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCC
Confidence 22222 11126899999999988888899999988 56777555
No 76
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.80 E-value=0.002 Score=62.07 Aligned_cols=93 Identities=20% Similarity=0.280 Sum_probs=63.0
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
+++||||+|+|.+|+.+++.|.+.+ .+++++|-|. +++....+ ... +.++
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~--~~~~v~v~d~-~~~~~~~~-----------------~~~--------~~~~-- 58 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLP--GAALVRLASS-NPDNLALV-----------------PPG--------CVIE-- 58 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCT--TEEEEEEEES-CHHHHTTC-----------------CTT--------CEEE--
T ss_pred CcceEEEECCcHHHHHHHHHHHhCC--CcEEEEEEeC-CHHHHHHH-----------------Hhh--------Cccc--
Confidence 4589999999999999999998764 4999999874 33322111 111 1122
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+++++- .+.++|+|+.||+.....+.+...+++| |.|++--|
T Consensus 59 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~eKP 101 (315)
T 3c1a_A 59 SDWRSVV-SAPEVEAVIIATPPATHAEITLAAIASG-KAVLVEKP 101 (315)
T ss_dssp SSTHHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEcCC
Confidence 2333221 1236899999999888888888889988 35666544
No 77
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.77 E-value=0.0039 Score=63.26 Aligned_cols=101 Identities=21% Similarity=0.226 Sum_probs=64.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhcc-ccceecccCcceeeecCCeEEECCEEEEEEe-
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLK-YDSTLGIFEADVKPVGTDGISVDGKVIQVVS- 145 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~-yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~- 145 (403)
++||||+|+|.+|+..++.+...+ .++|++|.|. +++.+..+.+ +. .+|. + . ..++.
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~--~~~lvav~d~-~~~~~~~~a~~~~-~~g~-~-~---------------~~~~~~ 78 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRD--DVEIVAFADP-DPYMVGRAQEILK-KNGK-K-P---------------AKVFGN 78 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCT--TEEEEEEECS-CHHHHHHHHHHHH-HTTC-C-C---------------CEEECS
T ss_pred CceEEEEecCHHHHHHHHHHHhCC--CcEEEEEEeC-CHHHHHHHHHHHH-hcCC-C-C---------------Cceecc
Confidence 689999999999999999998765 4999999985 4443322211 00 0110 0 0 01111
Q ss_pred -cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 146 -NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 146 -~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+.+.+++ ..+.++|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 79 ~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP 123 (444)
T 2ixa_A 79 GNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVS 123 (444)
T ss_dssp STTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCC
T ss_pred CCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 1122222 112368999999999988899999999884 5666444
No 78
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.77 E-value=0.0011 Score=64.69 Aligned_cols=98 Identities=18% Similarity=0.190 Sum_probs=64.0
Q ss_pred C-ceeEEEEccChhHHHHHHHHHcCCC-----CCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEE
Q 015637 67 A-KLKVAINGFGRIGRNFLRCWHGRKD-----SPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKV 140 (403)
Q Consensus 67 m-~ikVaInGfGrIGr~vlr~l~~~~~-----~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~ 140 (403)
| ++||||+|+|.||+.-++++...+. ...+|++|.|. +++....+.+ .||- .
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~-~~~~a~~~a~---~~g~---~--------------- 61 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR-DAEAVRAAAG---KLGW---S--------------- 61 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS-SHHHHHHHHH---HHTC---S---------------
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC-CHHHHHHHHH---HcCC---C---------------
Confidence 5 5999999999999998888765321 12489999985 4443322221 1110 0
Q ss_pred EEEEecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 141 IQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 141 I~v~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.++ .|.+++ ..+.++|.|+=||....-.+.+...+++| |.|++--|
T Consensus 62 -~~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKP 107 (390)
T 4h3v_A 62 -TTE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKP 107 (390)
T ss_dssp -EEE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -ccc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecC
Confidence 011 122221 11237899999999999999999999998 46777555
No 79
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.76 E-value=0.0008 Score=66.35 Aligned_cols=36 Identities=28% Similarity=0.505 Sum_probs=29.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCC-----CCCceEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLEVVAINDT 103 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~-----~~~~evvaInd~ 103 (403)
++||||.|+|.||+.+++.+.+++ ..+++|++|.|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 589999999999999999997642 013899999874
No 80
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.76 E-value=0.0025 Score=62.74 Aligned_cols=92 Identities=25% Similarity=0.341 Sum_probs=62.2
Q ss_pred ceeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.+|+. .++++...+ .++|++|.|. +++..+ -+| .+ ++++
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~--~~~l~av~d~-~~~~~~--~~~---------------------~~--~~~~-- 54 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNP--HFELYKIVER-SKELSK--ERY---------------------PQ--ASIV-- 54 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCT--TEEEEEEECS-SCCGGG--TTC---------------------TT--SEEE--
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCC--CeEEEEEEcC-CHHHHH--HhC---------------------CC--CceE--
Confidence 589999999999997 788887765 4999999884 222111 001 01 0111
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+-||....-.+.+...+++| |.|++--|
T Consensus 55 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (362)
T 3fhl_A 55 RSFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVEKP 97 (362)
T ss_dssp SCSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEecC
Confidence 2232221 1236899999999998889999999998 46777555
No 81
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.75 E-value=0.003 Score=61.41 Aligned_cols=95 Identities=19% Similarity=0.194 Sum_probs=62.9
Q ss_pred ceeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.||+. +++++...+ .++|+||.|. +++....+.+ .||- . .++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~--~~~lvav~d~-~~~~a~~~a~---~~g~---~----------------~~y-- 75 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAE--NCVVTAIASR-DLTRAREMAD---RFSV---P----------------HAF-- 75 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCS--SEEEEEEECS-SHHHHHHHHH---HHTC---S----------------EEE--
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCC--CeEEEEEECC-CHHHHHHHHH---HcCC---C----------------eee--
Confidence 489999999999986 578887765 4999999985 4443322211 1110 0 011
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.|.+++ ..+.++|+|+=||....-.+.+...+++|. .|++--|
T Consensus 76 ~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 118 (350)
T 4had_A 76 GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCEKP 118 (350)
T ss_dssp SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEeCC
Confidence 122221 012368999999999999999999999884 6666444
No 82
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.75 E-value=0.0016 Score=65.11 Aligned_cols=97 Identities=21% Similarity=0.239 Sum_probs=63.8
Q ss_pred ceeEEEEccChhHHHHHHHHHcCC------CCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRK------DSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVI 141 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~------~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I 141 (403)
|+||||+|+|.||+..++++.+.+ .+.++||||.|. +++....+.+ .||. .
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~-~~~~a~~~a~---~~~~---~---------------- 82 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ-DQAMAERHAA---KLGA---E---------------- 82 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS-SHHHHHHHHH---HHTC---S----------------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC-CHHHHHHHHH---HcCC---C----------------
Confidence 699999999999999988886421 124799999985 4443322211 1110 0
Q ss_pred EEEecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 142 QVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 142 ~v~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+++ .|.+++ ..+.++|+|+=||....-.+.+...+++| |.|++--|
T Consensus 83 ~~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 128 (412)
T 4gqa_A 83 KAY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKP 128 (412)
T ss_dssp EEE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred eEE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecC
Confidence 011 112111 11236899999999999999999999998 46777555
No 83
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.75 E-value=0.0022 Score=60.76 Aligned_cols=33 Identities=18% Similarity=0.436 Sum_probs=28.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~ 103 (403)
+|||+|+|+|++||.+++++.+++ + +||++-|.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~--~-eLva~~d~ 35 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKG--H-EIVGVIEN 35 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--C-EEEEEECS
T ss_pred ceEEEEECcCHHHHHHHHHHHhCC--C-EEEEEEec
Confidence 389999999999999999999875 5 99887663
No 84
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.74 E-value=0.00084 Score=65.64 Aligned_cols=87 Identities=24% Similarity=0.238 Sum_probs=61.1
Q ss_pred ceeEEEEccChhHH-HHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr-~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.||+ ..++++.+.+ .++|++|.|. +.+ ++ | ++++
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~--~~~lvav~d~-~~~------~~----------------------g--~~~~-- 69 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNA--NFKLVATASR-HGT------VE----------------------G--VNSY-- 69 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCT--TEEEEEEECS-SCC------CT----------------------T--SEEE--
T ss_pred CceEEEEecCHHHHHHHHHHHHhCC--CeEEEEEEeC-Chh------hc----------------------C--CCcc--
Confidence 58999999999999 7999998875 4999999874 111 00 0 0111
Q ss_pred CCCCCCCCCC-cCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGD-LGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~-~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+ .++|+|+-||+...-.+.+...+++| |.|++--|
T Consensus 70 ~~~~~ll-~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 113 (330)
T 4ew6_A 70 TTIEAML-DAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKP 113 (330)
T ss_dssp SSHHHHH-HHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHH-hCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCC
Confidence 1222210 11 26899999999888889999999998 56777555
No 85
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.72 E-value=0.0021 Score=63.96 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=64.4
Q ss_pred CceeEEEEccC-hhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInGfG-rIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
|++||||+|+| .+|+..++.+...+ .+++++|.|. +++....+.+ .|| +. ++
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~a~---~~g-----~~---------------~~- 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHP--DAQIVAACDP-NEDVRERFGK---EYG-----IP---------------VF- 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCT--TEEEEEEECS-CHHHHHHHHH---HHT-----CC---------------EE-
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhCC--CeEEEEEEeC-CHHHHHHHHH---HcC-----CC---------------eE-
Confidence 67999999999 99999999998765 4999999985 4433221111 011 00 11
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+-||....-.+.+...+++| |.|++--|
T Consensus 54 -~~~~ell-~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 96 (387)
T 3moi_A 54 -ATLAEMM-QHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKP 96 (387)
T ss_dssp -SSHHHHH-HHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHHH-cCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCC
Confidence 1222210 1126899999999988888999999998 56777555
No 86
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.70 E-value=0.0029 Score=62.38 Aligned_cols=33 Identities=30% Similarity=0.585 Sum_probs=29.7
Q ss_pred eeEEEEccChhHHHHHHHHHcC--------CCCCceEEEEecC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGR--------KDSPLEVVAINDT 103 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~--------~~~~~evvaInd~ 103 (403)
+||||.|+|.||+.+++.+.++ + +++|++|.|.
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~--~~~lvaV~d~ 43 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIG--EFKVTAVADS 43 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHC--CEEEEEEECS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCC--CEEEEEEEeC
Confidence 8999999999999999999876 4 4999999884
No 87
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.66 E-value=0.0022 Score=60.89 Aligned_cols=70 Identities=24% Similarity=0.258 Sum_probs=48.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
|||+|+| +|++||.+++++.+++ .++++++-|..+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~--~~elva~~d~~~------------------------------------------ 36 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAAD--DLTLSAELDAGD------------------------------------------ 36 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCT--TCEEEEEECTTC------------------------------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEccCC------------------------------------------
Confidence 5899999 7999999999998765 399988865310
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAK 184 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGak 184 (403)
|++.+. ..++|+|+|+|......+.++..+++|..
T Consensus 37 dl~~~~--~~~~DvvIDfT~p~a~~~~~~~a~~~g~~ 71 (245)
T 1p9l_A 37 PLSLLT--DGNTEVVIDFTHPDVVMGNLEFLIDNGIH 71 (245)
T ss_dssp CTHHHH--HTTCCEEEECSCTTTHHHHHHHHHHTTCE
T ss_pred CHHHHh--ccCCcEEEEccChHHHHHHHHHHHHcCCC
Confidence 000000 01468888888777677777777777764
No 88
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.65 E-value=0.0053 Score=59.28 Aligned_cols=94 Identities=20% Similarity=0.291 Sum_probs=59.4
Q ss_pred CceeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
|++||||+|+|.+|+. +++.|...+ .++++ |.|. +++....+.+ .+|. ... .
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~--~~~l~-v~d~-~~~~~~~~a~---~~g~---~~~---------------~-- 53 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWP--DIELV-LCTR-NPKVLGTLAT---RYRV---SAT---------------C-- 53 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTST--TEEEE-EECS-CHHHHHHHHH---HTTC---CCC---------------C--
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCC--CceEE-EEeC-CHHHHHHHHH---HcCC---Ccc---------------c--
Confidence 6789999999999984 889887654 48998 8774 4443322211 0110 000 0
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
....+.+ +.++|+|+.||+...-.+.+...+++|. .|++--|
T Consensus 54 ~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 95 (323)
T 1xea_A 54 TDYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKP 95 (323)
T ss_dssp SSTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESC
T ss_pred cCHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCC
Confidence 0111222 2378999999998888888888888874 4666444
No 89
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.58 E-value=0.0053 Score=62.28 Aligned_cols=99 Identities=21% Similarity=0.198 Sum_probs=63.1
Q ss_pred ceeEEEEccChhHH-HHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr-~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.+|+ .+++.|.+.+ .++|++|.|. +.+....+.+ .||.-.. .+.+ .
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~--~~~lvav~d~-~~~~~~~~a~---~~g~~~~---------------~~~~--~ 139 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQ--HSRIEALVSG-NAEKAKIVAA---EYGVDPR---------------KIYD--Y 139 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCS--SEEEEEEECS-CHHHHHHHHH---HTTCCGG---------------GEEC--S
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCC--CcEEEEEEcC-CHHHHHHHHH---HhCCCcc---------------cccc--c
Confidence 68999999999997 8999887654 4999999884 4433222111 1110000 0111 1
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+.||......+.+...+++|. .|++--|
T Consensus 140 ~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKP 182 (433)
T 1h6d_A 140 SNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKP 182 (433)
T ss_dssp SSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 2233321 12368999999999888888999999884 5666444
No 90
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.57 E-value=0.0033 Score=61.33 Aligned_cols=99 Identities=19% Similarity=0.243 Sum_probs=60.4
Q ss_pred cC-ceeEEEEccChhHHHHHHHHHcC-----CCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCE
Q 015637 66 QA-KLKVAINGFGRIGRNFLRCWHGR-----KDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGK 139 (403)
Q Consensus 66 ~m-~ikVaInGfGrIGr~vlr~l~~~-----~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~ 139 (403)
.| ++||||+|+|.||+.-++++... ..+.++||||.|. +++....+.+ .||. .
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~-~~~~a~~~a~---~~g~---~-------------- 80 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA-NAGLAEARAG---EFGF---E-------------- 80 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC---TTHHHHHH---HHTC---S--------------
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC-CHHHHHHHHH---HhCC---C--------------
Confidence 36 69999999999999887776431 1134899999984 3332222111 1110 0
Q ss_pred EEEEEecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 140 VIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 140 ~I~v~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+++ .|.+++ ..+.++|.|+=||....-.+.+...+++|. .|++--|
T Consensus 81 --~~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKP 126 (393)
T 4fb5_A 81 --KAT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKP 126 (393)
T ss_dssp --EEE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred --eec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccC
Confidence 011 111111 012368999999999999999999999885 5666545
No 91
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.53 E-value=0.0035 Score=64.49 Aligned_cols=107 Identities=20% Similarity=0.324 Sum_probs=60.5
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecC-CeEE---ECCEEEE
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGT-DGIS---VDGKVIQ 142 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~-~~l~---i~G~~I~ 142 (403)
.++||||+|+|++|+.+++.+...+ .++|++|.|. +++......+ ..||. +..+...++ ..+. -.| .+.
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~--~veLvAV~D~-~~era~~~a~--~~yG~-~~~~~~~~~~~~i~~a~~~g-~~~ 94 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQ--GIEVGALSAR-RLPNTFKAIR--TAYGD-EENAREATTESAMTRAIEAG-KIA 94 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSS--SEEEEEEECS-STHHHHHHHH--HHHSS-STTEEECSSHHHHHHHHHTT-CEE
T ss_pred CceEEEEECChHHHHHHHHHHhhCC--CcEEEEEEeC-CHHHHHHHHH--HhcCC-ccccccccchhhhhhhhccC-Cce
Confidence 3699999999999999999887665 4999999985 4443322221 00120 001100000 0000 001 112
Q ss_pred EEecCCCCCCCCCCcCccEEeeCCCCc-CCHhhHHHHHHcCC
Q 015637 143 VVSNRNPVNLPWGDLGIDLVIEGTGVF-VDREGAGKHIQAGA 183 (403)
Q Consensus 143 v~~~~dp~~i~w~~~gvDiV~e~tG~f-~s~~~a~~hl~aGa 183 (403)
++ .|.+++ ..+.++|+|++|||.. ...+.+...+++|-
T Consensus 95 v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK 133 (446)
T 3upl_A 95 VT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK 133 (446)
T ss_dssp EE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC
T ss_pred EE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC
Confidence 22 233322 1223799999999864 44677888888875
No 92
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.52 E-value=0.0053 Score=60.46 Aligned_cols=95 Identities=18% Similarity=0.274 Sum_probs=62.7
Q ss_pred ceeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.||+. +++.|.+.+ .+++++|-|. +++....+.+ .+| . . .++
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~a~---~~~---~-~---------------~~~-- 57 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQ--DIRIVAACDS-DLERARRVHR---FIS---D-I---------------PVL-- 57 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCT--TEEEEEEECS-SHHHHGGGGG---TSC---S-C---------------CEE--
T ss_pred cceEEEECCCHHHHHHHHHHHHhCC--CcEEEEEEcC-CHHHHHHHHH---hcC---C-C---------------ccc--
Confidence 489999999999995 889998765 4999999884 4443322211 010 0 0 011
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++- .+.++|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 58 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 100 (359)
T 3m2t_A 58 DNVPAML-NQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKP 100 (359)
T ss_dssp SSHHHHH-HHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 1222221 12368999999998888888999999884 5776555
No 93
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.51 E-value=0.005 Score=60.14 Aligned_cols=97 Identities=20% Similarity=0.186 Sum_probs=64.5
Q ss_pred CceeEEEEccC-hhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 67 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 67 m~ikVaInGfG-rIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
.++||||+|+| .+|+..++.+...+ +.++|++|.|. +++....+.+ .||. . .++
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~a~---~~~~----~---------------~~~- 71 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLS-HLFEITAVTSR-TRSHAEEFAK---MVGN----P---------------AVF- 71 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTT-TTEEEEEEECS-SHHHHHHHHH---HHSS----C---------------EEE-
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCC-CceEEEEEEcC-CHHHHHHHHH---HhCC----C---------------ccc-
Confidence 36899999999 89999999998761 24999999985 4443322211 1110 0 111
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.|.+++ ..+.++|+|+-||+...-.+.+...+++| |.|++--|
T Consensus 72 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 114 (340)
T 1zh8_A 72 -DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKP 114 (340)
T ss_dssp -SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEeCC
Confidence 122211 01226899999999988889999999998 46777555
No 94
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.46 E-value=0.0045 Score=59.27 Aligned_cols=93 Identities=15% Similarity=0.179 Sum_probs=62.3
Q ss_pred ceeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.+|+. +++.|...+ .+++++|.|. +++....+.+ .||. . . -
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~a~---~~~~-----~---------------~--~ 57 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSE--RFEFVGAFTP-NKVKREKICS---DYRI-----M---------------P--F 57 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCS--SSEEEEEECS-CHHHHHHHHH---HHTC-----C---------------B--C
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCC--CeEEEEEECC-CHHHHHHHHH---HcCC-----C---------------C--c
Confidence 589999999999996 889887765 4999999884 4443322211 0110 0 0 0
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPG 192 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps 192 (403)
.+.+++- + ++|+|+-||+.....+.+...+++|. .|++--|.
T Consensus 58 ~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~ 99 (308)
T 3uuw_A 58 DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKPL 99 (308)
T ss_dssp SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCCC
Confidence 1222211 1 68999999999988899999999884 56665553
No 95
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.33 E-value=0.0049 Score=58.86 Aligned_cols=77 Identities=18% Similarity=0.279 Sum_probs=54.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
.|||+|.|||.|||.++|. +. +|++++-+ +. .+ .+ |- .. ..
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~~---leLv~v~~--~k-----------------------~g-el---gv--~a--~~ 52 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---GN---FEKIYAYD--RI-----------------------SK-DI---PG--VV--RL 52 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---SC---CSEEEEEC--SS-----------------------CC-CC---SS--SE--EC
T ss_pred cceEEEECcCHHHHHHHhc---CC---cEEEEEEe--cc-----------------------cc-cc---Cc--ee--eC
Confidence 5799999999999999998 22 99988754 10 01 11 21 12 14
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeE
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkV 186 (403)
|.+.+.. ..|+|+||++...-.++.++.|++|..-|
T Consensus 53 d~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~dvv 88 (253)
T 1j5p_A 53 DEFQVPS---DVSTVVECASPEAVKEYSLQILKNPVNYI 88 (253)
T ss_dssp SSCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSEEE
T ss_pred CHHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCCEE
Confidence 5666652 68999999988866677888999998433
No 96
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=96.24 E-value=0.0059 Score=61.74 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=30.5
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhH
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQ 108 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~ 108 (403)
+||+|.| ||.||+.+++++.+++ +.|+++++..-.+++.
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p-~~~~v~al~ag~ni~~ 44 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNL-DRYQVIALTANRNVKD 44 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTG-GGEEEEEEEESSCHHH
T ss_pred eEEEEECCCeEeHHHHHHHHHhCc-CcEEEEEEEcCCCHHH
Confidence 7999999 5999999999999876 2499998843234443
No 97
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.15 E-value=0.006 Score=58.53 Aligned_cols=99 Identities=22% Similarity=0.257 Sum_probs=59.0
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
+|||+|+| +|++||.+++.+.+.+ .++|+++-|..+.. +...|. |.+.+ +. . .| +.+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~--~~elva~~d~~~~~----~~g~d~--~~~~g-~~---~-----~~--v~~~-- 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALE--GVQLGAALEREGSS----LLGSDA--GELAG-AG---K-----TG--VTVQ-- 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHST--TEECCCEECCTTCT----TCSCCT--TCSSS-SS---C-----CS--CCEE--
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEecCchh----hhhhhH--HHHcC-CC---c-----CC--ceec--
Confidence 48999999 5999999999988765 39999887631100 000010 11100 00 0 01 2232
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.|++.+- .++|+|+|+|......+.+...+++|.. +|+..+
T Consensus 64 ~dl~~~l---~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 64 SSLDAVK---DDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp SCSTTTT---TSCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred CCHHHHh---cCCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 3444332 2689999988766667788888888874 555333
No 98
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.11 E-value=0.0065 Score=59.04 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=62.0
Q ss_pred ceeEEEEcc-ChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGf-GrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+ |.||+..++++.+.+ .++++|-|.. .+. + .+ +..+ +. + +++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~---~~lvav~d~~-~~~-~-~~--~~~~---~~-~---------------~~~-- 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTG---NCLVSAYDIN-DSV-G-II--DSIS---PQ-S---------------EFF-- 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTT---CEEEEEECSS-CCC-G-GG--GGTC---TT-C---------------EEE--
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCC---CEEEEEEcCC-HHH-H-HH--HhhC---CC-C---------------cEE--
Confidence 379999999 799999999998763 8999999842 211 1 01 1111 00 0 111
Q ss_pred CCCCCCC--------CCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLP--------WGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~--------w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++. ..+.++|+|+-||....-.+.+...+++| |.|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 105 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVICEKP 105 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEECC
Confidence 1121110 01347999999999999999999999998 46777555
No 99
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.04 E-value=0.015 Score=56.32 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=58.4
Q ss_pred ceeEEEEccChhHH-HHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr-~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.+|. .+++.|.. + .++|++|.|. +++....+. ..||. ++ ++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~-~--~~~lvav~d~-~~~~~~~~a---~~~~~----~~---------------~~-- 55 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID-A--GAELAGVFES-DSDNRAKFT---SLFPS----VP---------------FA-- 55 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH-T--TCEEEEEECS-CTTSCHHHH---HHSTT----CC---------------BC--
T ss_pred ccEEEEECCChHHHHHhhhhhcC-C--CcEEEEEeCC-CHHHHHHHH---HhcCC----Cc---------------cc--
Confidence 58999999999996 67777753 3 3999999984 222111111 00100 01 00
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.|.+++ ..+.++|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 56 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 98 (336)
T 2p2s_A 56 ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKP 98 (336)
T ss_dssp SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 012268999999999988899999999884 5666545
No 100
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.02 E-value=0.0029 Score=61.60 Aligned_cols=96 Identities=11% Similarity=0.095 Sum_probs=60.3
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCC---hhHHhhhccccceecccCcceeeecCCeEEECCEEEEE
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGG---VKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~---~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v 143 (403)
|++||||+|+|.+|+..++.+ .+ .++|++|.|... .+..+..++ .||. .. ++
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~~--~~~lvav~d~~~~~~~~~~~~~~~---~~~~---~~---------------~~ 55 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--DE--ECSITGIAPGVPEEDLSKLEKAIS---EMNI---KP---------------KK 55 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--CT--TEEEEEEECSSTTCCCHHHHHHHH---TTTC---CC---------------EE
T ss_pred CceEEEEEccchhHHHHHHhc--CC--CcEEEEEecCCchhhHHHHHHHHH---HcCC---CC---------------cc
Confidence 789999999999999888887 33 499999998421 122221110 0110 00 11
Q ss_pred EecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 144 ~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+ .|.+++ ..+.++|+|+-||....-.+.+...+++|. .|++--|
T Consensus 56 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 99 (337)
T 3ip3_A 56 Y--NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEKP 99 (337)
T ss_dssp C--SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred c--CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeCC
Confidence 1 222222 112368999999998888888999999984 5776555
No 101
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.01 E-value=0.0095 Score=59.40 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=30.8
Q ss_pred CceeEEEEccChhHHHHHHHHHcCC-CCCceEEEEecC
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRK-DSPLEVVAINDT 103 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~-~~~~evvaInd~ 103 (403)
.++||||.|+|.||+.+++.+.+++ ...++|++|.|.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 3589999999999999999998763 124899999874
No 102
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.00 E-value=0.016 Score=56.02 Aligned_cols=93 Identities=17% Similarity=0.223 Sum_probs=61.4
Q ss_pred eeEEEEcc-ChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 69 LKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 69 ikVaInGf-GrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
+||||+|+ |.||+..++++.+.+ .++++|.|.. ++. +. + +..+ + + .+++ .
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~---~~lvav~d~~-~~~-~~-~--~~~~---~--------------~--~~~~--~ 54 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVG---GVLVASLDPA-TNV-GL-V--DSFF---P--------------E--AEFF--T 54 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTT---CEEEEEECSS-CCC-GG-G--GGTC---T--------------T--CEEE--S
T ss_pred eEEEEECCChHHHHHHHHHHHhCC---CEEEEEEcCC-HHH-HH-H--HhhC---C--------------C--Ccee--C
Confidence 79999998 799999999998764 8999999842 211 11 1 1101 0 0 0111 1
Q ss_pred CCCCCC-----C--CCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLP-----W--GDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~-----w--~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+.+++. | .+.++|+|+-||....-.+.+...+++| |.|++--|
T Consensus 55 ~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 104 (312)
T 3o9z_A 55 EPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKP 104 (312)
T ss_dssp CHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECC
Confidence 121110 0 1237999999999999999999999998 46776544
No 103
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.99 E-value=0.013 Score=56.28 Aligned_cols=93 Identities=28% Similarity=0.324 Sum_probs=59.0
Q ss_pred eeEEEEccChhHHHH-HHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 69 LKVAINGFGRIGRNF-LRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 69 ikVaInGfGrIGr~v-lr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
+||||+|+|.+|+.+ ++.|.+ + .+++++|.|. +++....+.+ .+|. . + ++ .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~--~~~~vav~d~-~~~~~~~~~~---~~g~---~-~---------------~~--~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-T--GGEVVSMMST-SAERGAAYAT---ENGI---G-K---------------SV--T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-T--TCEEEEEECS-CHHHHHHHHH---HTTC---S-C---------------CB--S
T ss_pred CeEEEEcccHHHHHhhhHHhhc-C--CCeEEEEECC-CHHHHHHHHH---HcCC---C-c---------------cc--C
Confidence 589999999999998 888877 4 3899999884 4433322211 0110 0 0 00 1
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+.+++ ..+.++|+|+.||+.....+.+...+++| |.|++--|
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ekP 94 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAG-KHVLCEKP 94 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCC-CeEEEeCC
Confidence 11111 01126899999999888888888889987 35666444
No 104
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.97 E-value=0.013 Score=56.17 Aligned_cols=88 Identities=22% Similarity=0.232 Sum_probs=59.0
Q ss_pred ceeEEEEccChhHHHHHHHHHc---CCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHG---RKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~---~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~ 144 (403)
++||||+|+|.||+..++.+.. .+ .+++++|.|... + ...+ | +..
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~--~~~lvav~d~~~-------~--a~~~------------------g--~~~- 54 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAA--FLNLIGFVSRRE-------L--GSLD------------------E--VRQ- 54 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHT--TEEEEEEECSSC-------C--CEET------------------T--EEB-
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCC--CEEEEEEECchH-------H--HHHc------------------C--CCC-
Confidence 5899999999999999998865 23 489999987310 0 0000 1 010
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++ ..+.++|+|+.||+...-.+.+...+++|. .|++--|
T Consensus 55 --~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (294)
T 1lc0_A 55 --ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYP 97 (294)
T ss_dssp --CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred --CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCC
Confidence 122221 012369999999999988899999999884 5666444
No 105
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.87 E-value=0.012 Score=60.61 Aligned_cols=98 Identities=10% Similarity=0.190 Sum_probs=64.9
Q ss_pred ceeEEEEcc----ChhHHHHHHHHHcC-CCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEE
Q 015637 68 KLKVAINGF----GRIGRNFLRCWHGR-KDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQ 142 (403)
Q Consensus 68 ~ikVaInGf----GrIGr~vlr~l~~~-~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~ 142 (403)
++||||+|+ |.+|+..+++|... + .++||+|.|. +++....+.+ .||- + . +.
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~--~~~lvav~d~-~~~~a~~~a~---~~g~-~-~---------------~~ 95 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSS--QFQIVALYNP-TLKSSLQTIE---QLQL-K-H---------------AT 95 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTT--TEEEEEEECS-CHHHHHHHHH---HTTC-T-T---------------CE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCC--CeEEEEEEeC-CHHHHHHHHH---HcCC-C-c---------------ce
Confidence 589999999 99999999999876 4 4999999984 4433222111 1110 0 0 01
Q ss_pred EEecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCC-----CeEEEcCC
Q 015637 143 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGA-----KKVLITAP 191 (403)
Q Consensus 143 v~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGa-----kkVIIsap 191 (403)
++ .+.+++- .+.++|+|+-||....-.+.+...+++|. |.|++--|
T Consensus 96 ~~--~d~~ell-~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 96 GF--DSLESFA-QYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp EE--SCHHHHH-HCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred ee--CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 11 1222210 11268999999998888888999999994 67888555
No 106
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.62 E-value=0.015 Score=57.28 Aligned_cols=94 Identities=17% Similarity=0.221 Sum_probs=60.6
Q ss_pred ceeEEEEccChhHH-HHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr-~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||||+|+|.+|+ .++.++.. + .++|++|.|. +++....+.+ .||. .+ ++
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~-~--~~~lvav~d~-~~~~a~~~a~---~~~~----~~---------------~~-- 77 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLR-A--GARLAGFHEK-DDALAAEFSA---VYAD----AR---------------RI-- 77 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHH-T--TCEEEEEECS-CHHHHHHHHH---HSSS----CC---------------EE--
T ss_pred CcEEEEECcCHHHHHHHHHHhhc-C--CcEEEEEEcC-CHHHHHHHHH---HcCC----Cc---------------cc--
Confidence 68999999999995 46666654 3 3999999985 4443322211 1110 00 11
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.+++ ..+.++|+|+-||+...-.+.+...+++| |.|++--|
T Consensus 78 ~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 120 (361)
T 3u3x_A 78 ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKP 120 (361)
T ss_dssp SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESC
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCC
Confidence 122221 01236899999999988889999999988 46777555
No 107
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.55 E-value=0.021 Score=57.49 Aligned_cols=97 Identities=21% Similarity=0.238 Sum_probs=60.6
Q ss_pred ceeEEEEccCh---hHHHHHHHHHcCCCCCceEEE-EecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEE
Q 015637 68 KLKVAINGFGR---IGRNFLRCWHGRKDSPLEVVA-INDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (403)
Q Consensus 68 ~ikVaInGfGr---IGr~vlr~l~~~~~~~~evva-Ind~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v 143 (403)
++||||+|+|+ ||+..++++...+ .+++|+ |-|. +++....+.+ .+|- +. .+ +
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~--~~~lva~v~d~-~~~~a~~~a~---~~g~-~~-~~---------------~ 93 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDD--HYELVAGALSS-TPEKAEASGR---ELGL-DP-SR---------------V 93 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTS--CEEEEEEECCS-SHHHHHHHHH---HHTC-CG-GG---------------B
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCC--CcEEEEEEeCC-CHHHHHHHHH---HcCC-Cc-cc---------------c
Confidence 68999999999 9999999887664 499997 8774 4443322211 1111 00 00 0
Q ss_pred EecCCCCCCCCCC-----cCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 144 VSNRNPVNLPWGD-----LGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 144 ~~~~dp~~i~w~~-----~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+ .+.+++- .+ .++|+|+-||....-.+.+...+++|. .|++--|
T Consensus 94 ~--~~~~~ll-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 142 (417)
T 3v5n_A 94 Y--SDFKEMA-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVICDKP 142 (417)
T ss_dssp C--SCHHHHH-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEEESS
T ss_pred c--CCHHHHH-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEEECC
Confidence 0 1111110 00 258999999999999999999999884 5666555
No 108
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.38 E-value=0.029 Score=51.89 Aligned_cols=96 Identities=20% Similarity=0.173 Sum_probs=62.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
..||+|.|.|.+|+.+++.+... . .+++|++-|. +++. .+. .++|.+ +....
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~-~-g~~iVg~~D~-dp~k---------------------~g~--~i~gv~--V~~~~ 131 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFG-E-SFELRGFFDV-DPEK---------------------VGR--PVRGGV--IEHVD 131 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCC-S-SEEEEEEEES-CTTT---------------------TTC--EETTEE--EEEGG
T ss_pred CCEEEEECccHHHHHHHHhHhhc-C-CcEEEEEEeC-CHHH---------------------Hhh--hhcCCe--eecHH
Confidence 46999999999999999863332 2 4999998773 2210 011 134433 32223
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK 193 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~ 193 (403)
+.+++ ..+ ++|.|+-|++.....+-+...+++|.+-++.-.|..
T Consensus 132 dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~~ 175 (211)
T 2dt5_A 132 LLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPVV 175 (211)
T ss_dssp GHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred hHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCccc
Confidence 33332 234 799999999887666777788889987666656643
No 109
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.21 E-value=0.024 Score=56.38 Aligned_cols=102 Identities=20% Similarity=0.131 Sum_probs=61.1
Q ss_pred ceeEEEEccCh---hHHHHHHHHHcCCCCCceEEE-EecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEE
Q 015637 68 KLKVAINGFGR---IGRNFLRCWHGRKDSPLEVVA-INDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (403)
Q Consensus 68 ~ikVaInGfGr---IGr~vlr~l~~~~~~~~evva-Ind~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v 143 (403)
++||||+|+|+ ||+..++++...+ .+++|+ |-|. +++....+.+ .||--. .+ ...+ + + .+
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~--~~~lva~v~d~-~~~~a~~~a~---~~g~~~--~~-~~~~---~--~--~l 75 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDN--TFVLVAGAFDI-DPIRGSAFGE---QLGVDS--ER-CYAD---Y--L--SM 75 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGG--SEEEEEEECCS-SHHHHHHHHH---HTTCCG--GG-BCSS---H--H--HH
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCC--CeEEEEEEeCC-CHHHHHHHHH---HhCCCc--ce-eeCC---H--H--HH
Confidence 68999999999 9999999887654 499998 7664 4443322211 111100 00 0000 0 0 01
Q ss_pred EecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 144 ~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+. ++... +.++|+|+-||....-.+.+...+++|. .|++--|
T Consensus 76 l~--~~~~~---~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 117 (398)
T 3dty_A 76 FE--QEARR---ADGIQAVSIATPNGTHYSITKAALEAGL-HVVCEKP 117 (398)
T ss_dssp HH--HHTTC---TTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred Hh--ccccc---CCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 00 00000 0258999999999999999999999884 5666444
No 110
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.16 E-value=0.053 Score=54.16 Aligned_cols=92 Identities=22% Similarity=0.295 Sum_probs=57.9
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
++||||+|+| .|+.-++++.+.+ +.++||+|-|. +.+....+- ..|| ++++ .
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~-~~~elvav~~~-~~~~a~~~a---~~~g--------------------v~~~--~ 58 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPP-EGLELVGLLAQ-GSARSRELA---HAFG--------------------IPLY--T 58 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCC-TTEEEEEEECC-SSHHHHHHH---HHTT--------------------CCEE--S
T ss_pred CCEEEEEehH-HHHHHHHHHHhCC-CCeEEEEEECC-CHHHHHHHH---HHhC--------------------CCEE--C
Confidence 6899999999 6999999887664 24999999985 333221111 1111 1122 2
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCC----HhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVD----REGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s----~~~a~~hl~aGakkVIIsap 191 (403)
|.+++. .++|+|+=||....- .+.+...+++|. .|++--|
T Consensus 59 ~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKP 102 (372)
T 4gmf_A 59 SPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHP 102 (372)
T ss_dssp SGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESC
T ss_pred CHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecC
Confidence 344443 258888889877765 577888899885 5665433
No 111
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=94.89 E-value=0.078 Score=53.19 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=60.3
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhcc-ccceecccCcceeeecCCeE--EECCEEEEEE
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLK-YDSTLGIFEADVKPVGTDGI--SVDGKVIQVV 144 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~-yDS~~G~f~~~v~~~~~~~l--~i~G~~I~v~ 144 (403)
.||+|+| ||.||+..++++..++ .|+|+++..-.+.+.+....+ |...+ +-+.+.... .+.. .+.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~--~~~vvaL~a~~n~~~l~~q~~~f~p~~------v~v~~~~~~~~~l~~---~~~ 72 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVK--GIRLIGISFHSNLELAFKIVKEFNVKN------VAITGDVEFEDSSIN---VWK 72 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSC--SEEEEEEEESSCHHHHHHHHHHHTCCE------EEECSSCCCCCSSSE---EEE
T ss_pred ceEEEECCCCHHHHHHHHHHHhCC--CeEEEEEEccCCHHHHHHHHHHcCCCE------EEEccHHHHHHHHHH---Hcc
Confidence 5899999 8999999999998873 599999954335554443321 22111 100010000 0000 010
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcC
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsa 190 (403)
.+....++- ....+|+|+.++-.+...+-.-..+++| |+|.+.+
T Consensus 73 G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaLAN 116 (376)
T 3a06_A 73 GSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCLAN 116 (376)
T ss_dssp STTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEECC
T ss_pred CHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEEeC
Confidence 000000110 0125899999997777777677788888 4555533
No 112
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=94.85 E-value=0.02 Score=58.06 Aligned_cols=98 Identities=10% Similarity=0.155 Sum_probs=64.9
Q ss_pred ceeEEEEcc----ChhHHHHHHHHHcC-CCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEE
Q 015637 68 KLKVAINGF----GRIGRNFLRCWHGR-KDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQ 142 (403)
Q Consensus 68 ~ikVaInGf----GrIGr~vlr~l~~~-~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~ 142 (403)
++||||+|+ |.+|+..++.|... + .++||+|.|. +++....+.+ .||. + . +.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~--~~~lvav~d~-~~~~~~~~a~---~~g~-~-~---------------~~ 76 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSS--QFQITALYSP-KIETSIATIQ---RLKL-S-N---------------AT 76 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTT--TEEEEEEECS-SHHHHHHHHH---HTTC-T-T---------------CE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCC--CeEEEEEEeC-CHHHHHHHHH---HcCC-C-c---------------ce
Confidence 489999999 99999999999887 4 4999999985 4433222111 1110 0 0 01
Q ss_pred EEecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCC-----CeEEEcCC
Q 015637 143 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGA-----KKVLITAP 191 (403)
Q Consensus 143 v~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGa-----kkVIIsap 191 (403)
++ .+.+++- .+.++|+|+-||....-.+.+...+++|. |.|++--|
T Consensus 77 ~~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 77 AF--PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp EE--SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred ee--CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 11 1222221 11268999999998888888999999994 67777555
No 113
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=94.70 E-value=0.041 Score=54.20 Aligned_cols=96 Identities=19% Similarity=0.246 Sum_probs=57.7
Q ss_pred CceeEEEEc-cChhHHH-HH----HHHHcCCCCCceEE---------EEecCCChhHHhhhccccceecccCcceeeecC
Q 015637 67 AKLKVAING-FGRIGRN-FL----RCWHGRKDSPLEVV---------AINDTGGVKQASHLLKYDSTLGIFEADVKPVGT 131 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~-vl----r~l~~~~~~~~evv---------aInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~ 131 (403)
.++||||+| +|.+|+. .+ +++.+.+ .++++ +|.|. +++....+.+ .||. .
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~--~~~l~~~~~~~~~~av~~~-~~~~a~~~a~---~~~~---~------ 69 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQG--GVRLKNGDRIMPDPILVGR-SAEKVEALAK---RFNI---A------ 69 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHT--SEECTTSCEEEEEEEEECS-SSHHHHHHHH---HTTC---C------
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcC--ceeecCCcccceeeEEEcC-CHHHHHHHHH---HhCC---C------
Confidence 478999999 9999997 66 7776543 24432 56663 3333222211 0110 0
Q ss_pred CeEEECCEEEEEEecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 132 DGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 132 ~~l~i~G~~I~v~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.++ .|.+++- .+.++|+|+-||+...-.+.+...+++| |.|++--|
T Consensus 70 ----------~~~--~~~~~ll-~~~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP 115 (383)
T 3oqb_A 70 ----------RWT--TDLDAAL-ADKNDTMFFDAATTQARPGLLTQAINAG-KHVYCEKP 115 (383)
T ss_dssp ----------CEE--SCHHHHH-HCSSCCEEEECSCSSSSHHHHHHHHTTT-CEEEECSC
T ss_pred ----------ccc--CCHHHHh-cCCCCCEEEECCCchHHHHHHHHHHHCC-CeEEEcCC
Confidence 011 1222210 1126899999999999999999999998 45666434
No 114
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.70 E-value=0.051 Score=48.58 Aligned_cols=31 Identities=26% Similarity=0.492 Sum_probs=26.7
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGAR 32 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 4899999 9999999999999875 78877764
No 115
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=94.65 E-value=0.098 Score=44.87 Aligned_cols=85 Identities=25% Similarity=0.370 Sum_probs=57.6
Q ss_pred ceeEEEEcc----ChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEE
Q 015637 68 KLKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (403)
Q Consensus 68 ~ikVaInGf----GrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v 143 (403)
+.+|||+|. |.+|+.+++.|.+.. ++|..+|-. ++. +.|. ++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G---~~V~~vnp~-----------~~~------------------i~G~--~~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG---FEVLPVNPN-----------YDE------------------IEGL--KC 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTT-----------CSE------------------ETTE--EC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC---CEEEEeCCC-----------CCe------------------ECCe--ee
Confidence 458999998 999999999998765 787766631 011 1232 22
Q ss_pred EecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 144 ~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+ .++++++ ..+|+|+-++......+-++..+++|++.+++...
T Consensus 60 ~--~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 60 Y--RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp B--SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred c--CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 2 3455554 26899999998655555555666789988887543
No 116
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.47 E-value=0.097 Score=48.51 Aligned_cols=95 Identities=17% Similarity=0.211 Sum_probs=58.1
Q ss_pred ceeEEEEccChhHHHHHHH-HHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~-l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||+|.|.|.+|+.+++. .... ..+++|++-|. +++. .+. .++|.+ +...
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~--~g~~iVg~~D~-dp~k---------------------~g~--~i~gv~--V~~~ 136 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKN--NNTKISMAFDI-NESK---------------------IGT--EVGGVP--VYNL 136 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC--------CCEEEEEES-CTTT---------------------TTC--EETTEE--EEEG
T ss_pred CCEEEEEccCHHHHHHHHHHhccc--CCcEEEEEEeC-CHHH---------------------HHh--HhcCCe--eech
Confidence 3689999999999999994 3332 24899988773 2210 011 234433 3222
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCC
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK 193 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~ 193 (403)
.+.+++- .+ . |+|+-|++.....+-+...+++|.+.++.-.|-.
T Consensus 137 ~dl~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~~ 180 (215)
T 2vt3_A 137 DDLEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPAR 180 (215)
T ss_dssp GGHHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred hhHHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCcee
Confidence 3333321 12 3 9999999877666777888889998777777753
No 117
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.42 E-value=0.3 Score=45.08 Aligned_cols=34 Identities=12% Similarity=0.131 Sum_probs=28.3
Q ss_pred cCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 66 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.|++||.|.|.|.||+.+++.|.++. .+|+++..
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 36 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQG---WRIIGTSR 36 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGT---CEEEEEES
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCC---CEEEEEEc
Confidence 36789999999999999999999875 78887764
No 118
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.07 E-value=0.22 Score=48.23 Aligned_cols=32 Identities=19% Similarity=0.370 Sum_probs=26.5
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCc--eEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPL--EVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~--evvaIn 101 (403)
|.+||+|+|+|.||+.+.+.|.... + +|++.+
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G---~~~~V~~~d 65 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSG---FKGKIYGYD 65 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTT---CCSEEEEEC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC---CCCEEEEEE
Confidence 4579999999999999999998764 4 776654
No 119
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.96 E-value=0.058 Score=53.10 Aligned_cols=93 Identities=20% Similarity=0.245 Sum_probs=55.9
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
+|||.|.|.|.||+.+++.|.++ .+|. +.|. +.+.+..+.+. . ..+.+ ...
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~----~~v~-~~~~-~~~~~~~~~~~----------~------------~~~~~-d~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE----FDVY-IGDV-NNENLEKVKEF----------A------------TPLKV-DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT----SEEE-EEES-CHHHHHHHTTT----------S------------EEEEC-CTT
T ss_pred ccEEEEECCCHHHHHHHHHHhcC----CCeE-EEEc-CHHHHHHHhcc----------C------------CcEEE-ecC
Confidence 57999999999999999998764 3432 3332 23322222110 0 01111 112
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
|++.+.=--.++|+|+.|+|.+...+-++..+++|+ -+++..
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC--EEEECC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc--ceEeee
Confidence 222211001368999999999988888889999998 556543
No 120
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.95 E-value=0.18 Score=43.39 Aligned_cols=85 Identities=18% Similarity=0.187 Sum_probs=57.7
Q ss_pred eeEEEEcc----ChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEE
Q 015637 69 LKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (403)
Q Consensus 69 ikVaInGf----GrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~ 144 (403)
.+|||+|. |++|+.+++.|.+.. ++|..+|-. ..++. +.|. +++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G---~~v~~vnp~-------------------------~~g~~--i~G~--~~~ 61 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQG---YHVIPVSPK-------------------------VAGKT--LLGQ--QGY 61 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHT---CCEEEECSS-------------------------STTSE--ETTE--ECC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCC---CEEEEeCCc-------------------------ccccc--cCCe--ecc
Confidence 57999997 899999999998765 677666531 00111 2332 232
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcC
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsa 190 (403)
.++++++ ..+|+|+-|+......+-++..+++|+|.+++..
T Consensus 62 --~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 62 --ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp --SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred --CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 4566665 2689999999865555556666778999888863
No 121
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.94 E-value=0.15 Score=48.15 Aligned_cols=32 Identities=31% Similarity=0.419 Sum_probs=26.9
Q ss_pred CceeEEEEcc-ChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGf-GrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|++||+|+|. |.+|+.+++.|.... ++|+.++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~ 42 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSA---HHLAAIE 42 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSS---SEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 5579999998 999999999998765 6877554
No 122
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.84 E-value=0.11 Score=48.95 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=28.0
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|++||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTR 34 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 667999999 9999999999999875 68877764
No 123
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=93.74 E-value=0.16 Score=52.40 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=67.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC---------CChhHHhhhcccccee-cccCcceeeecCCeEEEC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT---------GGVKQASHLLKYDSTL-GIFEADVKPVGTDGISVD 137 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~---------~~~~~~a~ll~yDS~~-G~f~~~v~~~~~~~l~i~ 137 (403)
..+|+|-|||-||+..++.|.+.. -.||+|.|. .+.+.+..|+++-... |+...-. +. +.
T Consensus 252 g~~vaVqG~GnVG~~~a~~L~~~G---akvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~----~~---~~ 321 (470)
T 2bma_A 252 KQTAVVSGSGNVALYCVQKLLHLN---VKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYL----NH---SS 321 (470)
T ss_dssp GCEEEEECSSHHHHHHHHHHHHTT---CEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGG----GT---CS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC---CEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHH----hh---cC
Confidence 368999999999999999999875 799999994 3455555665432211 2221111 00 00
Q ss_pred CEEEEEEecCCCCCCCCCCcCccEEeeCC-CCcCCHhhHHHHHHcCCCeEEE
Q 015637 138 GKVIQVVSNRNPVNLPWGDLGIDLVIEGT-GVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 138 G~~I~v~~~~dp~~i~w~~~gvDiV~e~t-G~f~s~~~a~~hl~aGakkVII 188 (403)
|- +.. +++++ | ...+||.+-|+ +..++.+.+...++.+|| +|+
T Consensus 322 ~a--~~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 365 (470)
T 2bma_A 322 TA--KYF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVG 365 (470)
T ss_dssp SC--EEC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEE
T ss_pred Cc--EEe---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcE-EEE
Confidence 10 111 22333 7 46899999987 888898999988888885 344
No 124
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.72 E-value=0.065 Score=45.22 Aligned_cols=41 Identities=17% Similarity=0.265 Sum_probs=32.7
Q ss_pred cccCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHH
Q 015637 64 AAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQA 109 (403)
Q Consensus 64 ~~~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~ 109 (403)
+.+|+-+|.|.|+|++|+.+++.|.++. .++++|.. +++.+
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~~g---~~v~vid~--~~~~~ 43 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLASD---IPLVVIET--SRTRV 43 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHHTT---CCEEEEES--CHHHH
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC--CHHHH
Confidence 3457779999999999999999999875 78888874 44443
No 125
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=93.47 E-value=0.16 Score=43.58 Aligned_cols=86 Identities=13% Similarity=0.093 Sum_probs=58.3
Q ss_pred eeEEEEcc----ChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEE
Q 015637 69 LKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (403)
Q Consensus 69 ikVaInGf----GrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~ 144 (403)
-+|||+|. |+.|+.+++.|.+.. ++|..||- +.. ++. +.|. +++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G---~~v~~vnp----~~~-----~~~------------------i~G~--~~~ 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQG---YRVLPVNP----RFQ-----GEE------------------LFGE--EAV 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTT---CEEEEECG----GGT-----TSE------------------ETTE--ECB
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCC---CEEEEeCC----Ccc-----cCc------------------CCCE--Eec
Confidence 47999996 899999999998875 78766652 100 111 2332 232
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
.+.++++ ..+|+|+-++......+-++...++|+|.++++.+
T Consensus 62 --~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 62 --ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp --SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred --CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3455554 26899999987765556677777889999888754
No 126
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=93.42 E-value=0.2 Score=42.99 Aligned_cols=83 Identities=22% Similarity=0.244 Sum_probs=57.4
Q ss_pred eeEEEEcc----ChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEE
Q 015637 69 LKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (403)
Q Consensus 69 ikVaInGf----GrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~ 144 (403)
.+|||+|. |++|+.+++.|.+.. ++|..||-. ++. +.|. +++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G---~~v~~Vnp~-----------~~~------------------i~G~--~~y 68 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHG---YDVYPVNPK-----------YEE------------------VLGR--KCY 68 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTT-----------CSE------------------ETTE--ECB
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCC---CEEEEECCC-----------CCe------------------ECCe--ecc
Confidence 58999996 799999999998765 787766531 011 2232 232
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcC
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsa 190 (403)
.++++++ ..+|+|+-++......+-++..+++|++.++++.
T Consensus 69 --~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 69 --PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp --SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred --CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3455554 2689999998876666667777788999887763
No 127
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.29 E-value=0.056 Score=51.11 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=27.5
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|+.+|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R 43 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLG---HPTYVFTR 43 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCC---CcEEEEEC
Confidence 545899999 9999999999999875 67777654
No 128
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=93.17 E-value=0.088 Score=49.72 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=26.9
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|+++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 36 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYAR 36 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEEC
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEEC
Confidence 346899999 9999999999999875 67776654
No 129
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.09 E-value=0.076 Score=49.78 Aligned_cols=31 Identities=19% Similarity=0.202 Sum_probs=26.6
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 36 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG---HPTYVLFR 36 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEEC
Confidence 5899999 9999999999999875 67777754
No 130
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.05 E-value=0.092 Score=45.72 Aligned_cols=31 Identities=29% Similarity=0.240 Sum_probs=26.6
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEe
Confidence 5899999 8999999999999875 68877754
No 131
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=93.05 E-value=0.13 Score=47.79 Aligned_cols=99 Identities=22% Similarity=0.233 Sum_probs=61.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
+.||+|+|.|..|+.+++.+... ...+++|++=|. +++. ..|+ . .++|- +|+...
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~-~~g~~iVg~~D~-dp~~---------kiG~----~--------~i~Gv--pV~~~~ 138 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHD-RNKMQISMAFDL-DSND---------LVGK----T--------TEDGI--PVYGIS 138 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCT-TSSEEEEEEEEC-TTST---------TTTC----B--------CTTCC--BEEEGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcc-cCCeEEEEEEeC-Cchh---------ccCc----e--------eECCe--EEeCHH
Confidence 36999999999999998875322 235999888663 2210 0111 0 02332 333322
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPG 192 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps 192 (403)
+.+++ -.+.++|+++-|++.....+-+....++|.+.++--+|-
T Consensus 139 dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 139 TINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp GHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCc
Confidence 22221 123589999999988766677888888999887766664
No 132
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.04 E-value=0.092 Score=46.86 Aligned_cols=31 Identities=29% Similarity=0.372 Sum_probs=26.9
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG---FEVTAVVR 36 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEc
Confidence 5899999 9999999999999875 68877754
No 133
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=92.98 E-value=0.069 Score=49.66 Aligned_cols=32 Identities=9% Similarity=0.092 Sum_probs=26.0
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|.| +|.||+.+++.|.+++ ..+|+++..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~--g~~V~~~~R 33 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANH--IDHFHIGVR 33 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT--CTTEEEEES
T ss_pred CEEEEEcCCchHHHHHHHHHhhCC--CCcEEEEEC
Confidence 4799999 9999999999988762 167777764
No 134
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=92.96 E-value=0.075 Score=51.01 Aligned_cols=32 Identities=22% Similarity=0.168 Sum_probs=26.8
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R 42 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH---RPTYILAR 42 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC---CCEEEEEC
Confidence 36899999 8999999999999875 67777765
No 135
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=92.36 E-value=0.24 Score=50.93 Aligned_cols=102 Identities=16% Similarity=0.184 Sum_probs=65.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC----C------ChhHHhhhcccccee-cccCcceeeecCCeEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT----G------GVKQASHLLKYDSTL-GIFEADVKPVGTDGISV 136 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~----~------~~~~~a~ll~yDS~~-G~f~~~v~~~~~~~l~i 136 (403)
..+|+|-|||-||+.+++.|.+.. ..||+|.|. . +++.+..|++|-... |++..- .+ . +
T Consensus 230 g~~v~VqG~GnVG~~~a~~L~~~G---akvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y----~~-~--~ 299 (449)
T 1bgv_A 230 GKTVALAGFGNVAWGAAKKLAELG---AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY----AD-K--F 299 (449)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHHT---CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHH----HH-H--H
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhc----cc-c--c
Confidence 368999999999999999998875 799999883 1 333445555433221 222111 00 0 0
Q ss_pred CCEEEEEEecCCCCCCCCCCcCccEEeeCC-CCcCCHhhHHHHHHcCCCeEEE
Q 015637 137 DGKVIQVVSNRNPVNLPWGDLGIDLVIEGT-GVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 137 ~G~~I~v~~~~dp~~i~w~~~gvDiV~e~t-G~f~s~~~a~~hl~aGakkVII 188 (403)
+.+.+ . ++++ | ...+|+.+-|+ +..++.+.+....+.||| +|+
T Consensus 300 ~a~~i---~---~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~ 343 (449)
T 1bgv_A 300 GVQFF---P---GEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVK-YYI 343 (449)
T ss_dssp TCEEE---E---TCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred CCEEe---C---chhh-h-cCCcceeeccccccccchhhHHHHHhcCCe-EEE
Confidence 12222 1 2233 7 46899999987 888899999887777885 344
No 136
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.05 E-value=0.34 Score=44.86 Aligned_cols=31 Identities=13% Similarity=0.345 Sum_probs=25.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+||+|+|+|.+|+.+.+.|.... +++|.+-|
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g---~~~v~~~~ 41 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG---FRIVQVYS 41 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CCEEEEEC
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC---CeEEEEEe
Confidence 68999999999999999998764 66555554
No 137
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=91.93 E-value=0.25 Score=47.39 Aligned_cols=87 Identities=17% Similarity=0.102 Sum_probs=56.8
Q ss_pred ceeEEEEcc-ChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInGf-GrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
++||+|.|. |++|+..++.+.+.+ +++|+.-+. +. .++. +.| ++++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g---~~~V~~V~p---~~---------------------~g~~--~~G--~~vy-- 53 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYG---TKMVGGVTP---GK---------------------GGTT--HLG--LPVF-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECT---TC---------------------TTCE--ETT--EEEE--
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCC---Cc---------------------ccce--eCC--eecc--
Confidence 479999995 999999999988754 676643321 10 0000 223 2333
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEE
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVII 188 (403)
.+.++++- +.++|+|+.++......+.+...+++|.+.+|+
T Consensus 54 ~sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 54 NTVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp SSHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 22333321 126899999999888888889999999986454
No 138
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.80 E-value=0.38 Score=45.13 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=25.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
++||+|+|+|.+|+.+.+.|.... ...+|+..+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g-~~~~V~~~d 38 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDH-PHYKIVGYN 38 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCC-CCcEEEEEc
Confidence 469999999999999999988652 126766554
No 139
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=91.76 E-value=0.4 Score=40.46 Aligned_cols=82 Identities=15% Similarity=0.057 Sum_probs=60.0
Q ss_pred eEEEEc----cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 70 KVAING----FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 70 kVaInG----fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
+|||+| -|++|..+++.|.++. |+|..||-- ++. +.|.+ .
T Consensus 6 siAVVGaS~~~~~~g~~v~~~L~~~g---~~V~pVnP~-----------~~~------------------i~G~~--~-- 49 (122)
T 3ff4_A 6 KTLILGATPETNRYAYLAAERLKSHG---HEFIPVGRK-----------KGE------------------VLGKT--I-- 49 (122)
T ss_dssp CEEEETCCSCTTSHHHHHHHHHHHHT---CCEEEESSS-----------CSE------------------ETTEE--C--
T ss_pred EEEEEccCCCCCCHHHHHHHHHHHCC---CeEEEECCC-----------CCc------------------CCCee--c--
Confidence 799999 2889999999998875 788888731 122 23322 2
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
-.+..++| . +|+|+-++......+..+...+.|+|.|+++..
T Consensus 50 y~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 50 INERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp BCSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred cCChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 24566776 3 899999998777777788888899998877643
No 140
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=91.55 E-value=0.13 Score=48.01 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=26.0
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R 36 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG---HPTFLLVR 36 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEEC
Confidence 5899999 9999999999999875 67766654
No 141
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=91.55 E-value=0.69 Score=43.59 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=26.9
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG---HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CEEEEEec
Confidence 5899999 9999999999999875 68877764
No 142
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=91.41 E-value=0.26 Score=50.06 Aligned_cols=94 Identities=23% Similarity=0.364 Sum_probs=57.3
Q ss_pred ceeEEEEccChhHHHHHHHHHc-CCCCCceEEEEecCC---------ChhHHhhhccccceecccCcceeeecCCeEEEC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHG-RKDSPLEVVAINDTG---------GVKQASHLLKYDSTLGIFEADVKPVGTDGISVD 137 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~-~~~~~~evvaInd~~---------~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~ 137 (403)
..+|+|-|||-||+.+++.|.+ .. ..||+|.|.. +++.+ ++|-..+|++.. ..+
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~G---akvVavsD~~G~i~dp~Gld~~~l---~~~~~~~g~l~~----y~~------ 272 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELG---SKVVAVSDSRGGIYNPEGFDVEEL---IRYKKEHGTVVT----YPK------ 272 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEEECSSCEEECTTCCCHHHH---HHHHHHSSCSTT----CSS------
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcC---CEEEEEEeCCCeEECCCCCCHHHH---HHHHHhhCCccc----CCC------
Confidence 4689999999999999999988 64 8999999852 34333 222122232211 111
Q ss_pred CEEEEEEecCCCCCCCCCCcCccEEeeCC-CCcCCHhhHHHHHHcCCCeEEEc
Q 015637 138 GKVIQVVSNRNPVNLPWGDLGIDLVIEGT-GVFVDREGAGKHIQAGAKKVLIT 189 (403)
Q Consensus 138 G~~I~v~~~~dp~~i~w~~~gvDiV~e~t-G~f~s~~~a~~hl~aGakkVIIs 189 (403)
.+.+ +++++ |. ..+|+++.|+ +..++.+.+... +|| +|+-
T Consensus 273 a~~~------~~~ei-l~-~~~DIliP~A~~n~i~~~~a~~l---~ak-~V~E 313 (415)
T 2tmg_A 273 GERI------TNEEL-LE-LDVDILVPAALEGAIHAGNAERI---KAK-AVVE 313 (415)
T ss_dssp SEEE------CHHHH-TT-CSCSEEEECSSTTSBCHHHHTTC---CCS-EEEC
T ss_pred ceEc------Cchhh-hc-CCCcEEEecCCcCccCcccHHHc---CCe-EEEe
Confidence 1111 12222 53 5799999997 667777666542 564 4443
No 143
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=91.15 E-value=0.17 Score=51.48 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=30.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG 104 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~ 104 (403)
..||+|-|||-||+.+++.|.+.. ..||+|.|..
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~G---akvVavsD~~ 245 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQG---GKVCAIAEWD 245 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHTT---CCEEECCBCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEEEecC
Confidence 468999999999999999999875 8999999863
No 144
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.09 E-value=1.1 Score=40.10 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=27.4
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.+||.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG---HEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC---CeEEEEEC
Confidence 46899999 9999999999999875 68877764
No 145
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=90.79 E-value=0.24 Score=49.64 Aligned_cols=155 Identities=12% Similarity=0.125 Sum_probs=75.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc--eEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL--EVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~--evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
+||+|.|.|.||+.+++.|.+++ .+ +|+ +.+. +.+.+..+.+ . ++.. .+..+. .+.+ ..
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g--~~~~~V~-v~~r-~~~~~~~la~--~-l~~~-------~~~~~~----~~~~-D~ 62 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNR--EVFSHIT-LASR-TLSKCQEIAQ--S-IKAK-------GYGEID----ITTV-DA 62 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCT--TTCCEEE-EEES-CHHHHHHHHH--H-HHHT-------TCCCCE----EEEC-CT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCceEEE-EEEC-CHHHHHHHHH--H-hhhh-------cCCceE----EEEe-cC
Confidence 58999999999999999998875 24 444 4442 3332222221 0 0000 000010 0111 11
Q ss_pred CCCCCCC--CCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCCCCCCCCeEEeecCccCCCC-----CCCeEecCC
Q 015637 147 RNPVNLP--WGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-----DEPIISNAS 219 (403)
Q Consensus 147 ~dp~~i~--w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsaps~~dvp~vV~gVN~~~~~~-----~~~IISnaS 219 (403)
.|++++. ..+.++|+||.|+|.+...+.+...+++|..-+-++.-...+...+.+..- ..+.. ...++.+..
T Consensus 63 ~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~-~~l~~~a~~aG~~~i~g~G 141 (405)
T 4ina_A 63 DSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQ-WAFHDRYKEKGVMALLGSG 141 (405)
T ss_dssp TCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHH-HTTHHHHHHHTCEEEECCB
T ss_pred CCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHH-HHHHHHHHHhCCEEEEcCC
Confidence 1111111 011137999999999887777888888888532222211111111111100 01211 135667776
Q ss_pred chhhhHHHHHHHHHhh-cC-eeEEEE
Q 015637 220 CTTNCLAPFVKVLDQK-FG-IIKGTM 243 (403)
Q Consensus 220 CTTn~Lap~lk~L~~~-fG-I~~~~~ 243 (403)
|--.....++..+.++ |+ |+.+.+
T Consensus 142 ~~PG~~~l~a~~~~~~~~~~i~~i~i 167 (405)
T 4ina_A 142 FDPGVTNVFCAYAQKHYFDEIHEIDI 167 (405)
T ss_dssp TTTBHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCccHHHHHHHHHHHhccCcccEEEE
Confidence 6544444444444443 54 566655
No 146
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=90.72 E-value=0.17 Score=47.23 Aligned_cols=31 Identities=26% Similarity=0.233 Sum_probs=25.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG---NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT---CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC---CcEEEEEC
Confidence 4799999 9999999999998864 57766654
No 147
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.64 E-value=0.93 Score=43.10 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=25.1
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCc--eEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPL--EVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~--evvaIn 101 (403)
+++||+|.|.|.||..+...|.... . +|+.+.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g---~~~~V~l~d 39 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRG---IAREIVLED 39 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CCSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC---CCCEEEEEe
Confidence 3479999999999999999888764 4 666554
No 148
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=90.48 E-value=0.29 Score=47.03 Aligned_cols=86 Identities=17% Similarity=0.166 Sum_probs=56.1
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEE-EEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVV-AINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evv-aInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
.+||+|.| +|+.|+.+++.+.+.. ++++ .||-- . .++ .+.| ++++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g---~~~v~~VnP~----~---------------------~g~--~i~G--~~vy- 53 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYG---TKIVAGVTPG----K---------------------GGM--EVLG--VPVY- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTT----C---------------------TTC--EETT--EEEE-
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcC---CeEEEEECCC----C---------------------CCc--eECC--EEee-
Confidence 36999999 6999999999888754 7765 44421 0 001 0233 2343
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEE
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVII 188 (403)
.+.++++- +.++|+++.++......+.++..+++|.+.+|+
T Consensus 54 -~sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 54 -DTVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp -SSHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 22233321 126899999998887778888888999986555
No 149
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.96 E-value=0.34 Score=39.53 Aligned_cols=31 Identities=23% Similarity=0.496 Sum_probs=26.4
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|+|.|+|.+|+.+++.|.+.. .+|+.+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g---~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG---HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999998764 68777754
No 150
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=89.94 E-value=0.37 Score=47.31 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=26.4
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|||+|+|+||+.+.+.+.... ++|.+.+
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~fg---~~v~~~d 171 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAFG---MKVLCYD 171 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CcEEEEECcchHHHHHHHhhcccC---ceeeecC
Confidence 358999999999999999998775 8887664
No 151
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.84 E-value=0.69 Score=42.61 Aligned_cols=28 Identities=32% Similarity=0.597 Sum_probs=23.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEE
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVA 99 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evva 99 (403)
|||+|+|+|.+|+.+.+.|.... ++|..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g---~~V~~ 28 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG---VEVVT 28 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEE
T ss_pred CeEEEEechHHHHHHHHHHHHCC---CeEEE
Confidence 48999999999999999998764 67655
No 152
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.76 E-value=0.24 Score=46.52 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=25.3
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|+|||+|+|+|.+|+.+++.|.... ++|..++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 35 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAG---YSLVVSD 35 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred ccceEEEECchHHHHHHHHHHHhCC---CEEEEEe
Confidence 6689999999999999999998764 6765443
No 153
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.60 E-value=0.32 Score=40.44 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=26.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.+|.|.|+|++|+.+++.|.++. .+|+.+..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g---~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG---KKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 48999999999999999999875 68887764
No 154
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=89.54 E-value=0.27 Score=47.95 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=27.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~G---~~V~~~dr 170 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAWG---FPLRCWSR 170 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTT---CCEEEEES
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 468999999999999999998765 78877664
No 155
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=89.44 E-value=0.46 Score=47.85 Aligned_cols=43 Identities=26% Similarity=0.377 Sum_probs=34.9
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec-CCChhHHhh
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASH 111 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd-~~~~~~~a~ 111 (403)
| -||.|.| ||-||++.|+++..+|+ .|+|+++.. -.+.+.++.
T Consensus 21 m-k~i~ILGSTGSIGtqtLdVi~~~pd-~f~V~aLaa~g~nv~~L~~ 65 (398)
T 2y1e_A 21 R-LRVVVLGSTGSIGTQALQVIADNPD-RFEVVGLAAGGAHLDTLLR 65 (398)
T ss_dssp C-EEEEEESTTSHHHHHHHHHHHHCTT-TEEEEEEEECSSCHHHHHH
T ss_pred c-eEEEEEccCcHHHHHHHHHHHhCCC-ceEEEEEEecCCCHHHHHH
Confidence 5 4899999 99999999999998873 699999987 545655443
No 156
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=89.37 E-value=0.37 Score=43.62 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=26.6
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+.+|.|.| +|.||+.+++.|.++. ..+|+++..
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G--~~~V~~~~R 56 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQ--TIKQTLFAR 56 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT--TEEEEEEES
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCC--CceEEEEEc
Confidence 45799999 9999999999998764 267766653
No 157
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=89.35 E-value=0.3 Score=48.34 Aligned_cols=32 Identities=31% Similarity=0.397 Sum_probs=27.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|.... ++|.+.+.
T Consensus 173 gktvGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 204 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRARGFG---LAIHYHNR 204 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CCEEEEEEeChhHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999998764 88877654
No 158
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.33 E-value=1.1 Score=43.06 Aligned_cols=75 Identities=20% Similarity=0.194 Sum_probs=47.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
..||||+|.|.+|..+.+.|. .. ++|+..+- +++.+..+.++ +..... +. ++.. .
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG---~~V~v~d~--~~~~~~~~~~~------l~~~~~----~~-------i~~~--~ 66 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SK---HEVVLQDV--SEKALEAAREQ------IPEELL----SK-------IEFT--T 66 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT---SEEEEECS--CHHHHHHHHHH------SCGGGG----GG-------EEEE--S
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cC---CEEEEEEC--CHHHHHHHHHH------HHHHHh----CC-------eEEe--C
Confidence 358999999999999999998 75 78876663 45554444432 000000 01 2221 3
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVD 171 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s 171 (403)
+++.+ .++|+||||...-..
T Consensus 67 ~~~~~----~~aDlVieavpe~~~ 86 (293)
T 1zej_A 67 TLEKV----KDCDIVMEAVFEDLN 86 (293)
T ss_dssp SCTTG----GGCSEEEECCCSCHH
T ss_pred CHHHH----cCCCEEEEcCcCCHH
Confidence 45433 379999999976543
No 159
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.26 E-value=1.1 Score=42.97 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=25.5
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|+|||+|.|.|.+|..+...|. .. .+|..+..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g---~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LY---HDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT---SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cC---CceEEEEC
Confidence 6789999999999999999888 54 57665653
No 160
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=89.21 E-value=0.3 Score=48.01 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=27.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|.+.+-
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~G---~~V~~~d~ 172 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAFG---MKVLCYDV 172 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CceEEEECcCHHHHHHHHHHHHCc---CEEEEECC
Confidence 468999999999999999998775 88877664
No 161
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=89.05 E-value=0.34 Score=47.46 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=27.5
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~G---~~V~~~dr 168 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASALG---MHVIGVNT 168 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECcCHHHHHHHHHHHhCC---CEEEEECC
Confidence 458999999999999999998765 89887764
No 162
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.84 E-value=0.4 Score=40.67 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=27.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+-+|.|.|+|++|+.+++.|.+.. .+|+.|..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g---~~V~vid~ 34 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRG---QNVTVISN 34 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 357999999999999999998865 68887864
No 163
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=88.65 E-value=0.35 Score=47.43 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=27.2
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|.+.+.
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 171 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHFG---MKVLGVSR 171 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred cceEEEEEECHHHHHHHHHHHhCC---CEEEEEcC
Confidence 458999999999999999998765 88877654
No 164
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.63 E-value=0.72 Score=47.83 Aligned_cols=31 Identities=26% Similarity=0.460 Sum_probs=25.9
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|+|.|+|.||+.+++.+.... .+|++++
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~G---a~Viv~d 304 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQG---ARVSVTE 304 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred cCEEEEEccCHHHHHHHHHHHHCC---CEEEEEe
Confidence 358999999999999999998765 6776665
No 165
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=88.59 E-value=0.35 Score=47.29 Aligned_cols=32 Identities=31% Similarity=0.520 Sum_probs=26.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|.... ++|++.+.
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 177 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGMG---ATVIGEDV 177 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999998765 78776653
No 166
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=88.55 E-value=0.35 Score=46.82 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=26.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|||+|+|+||+.+.+.|.... ++|.+.+
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d 154 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAALG---AQVRGFS 154 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEEC
Confidence 458999999999999999998764 7876554
No 167
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=88.52 E-value=0.35 Score=47.77 Aligned_cols=32 Identities=25% Similarity=0.414 Sum_probs=27.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|.+.+.
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G---~~V~~~d~ 179 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMG---AKVIAYDV 179 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCeEEEEecCHHHHHHHHHHhhCC---CEEEEECC
Confidence 458999999999999999998765 88877764
No 168
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.50 E-value=0.6 Score=48.13 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=29.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhh
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHL 112 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~l 112 (403)
.||||+|.|.+|..+...+.... ++|+..+- +.+.+..+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG---~~V~l~D~--~~e~l~~~ 44 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG---HQVLLYDI--SAEALTRA 44 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEECS--CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CeEEEEEC--CHHHHHHH
Confidence 48999999999999999998765 67765542 44444333
No 169
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=88.49 E-value=0.37 Score=44.97 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=26.9
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+++|.|.| +|.||+.+++.|.+++ ..+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~R 38 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDG--TFKVRVVTR 38 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC--SSEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcC--CceEEEEEc
Confidence 36899999 9999999999998753 268877764
No 170
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=88.38 E-value=0.37 Score=47.21 Aligned_cols=32 Identities=25% Similarity=0.461 Sum_probs=26.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|.... ++|++.+.
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 176 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGFG---AKVIAYDP 176 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999998765 78766653
No 171
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=88.33 E-value=0.4 Score=44.24 Aligned_cols=33 Identities=18% Similarity=0.407 Sum_probs=27.6
Q ss_pred cCceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 66 QAKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 66 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.|+|||.|.| +|.||+.+++.|.+++ .+|+++.
T Consensus 3 ~M~m~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~ 36 (287)
T 3sc6_A 3 AMKERVIITGANGQLGKQLQEELNPEE---YDIYPFD 36 (287)
T ss_dssp --CEEEEEESTTSHHHHHHHHHSCTTT---EEEEEEC
T ss_pred cceeEEEEECCCCHHHHHHHHHHHhCC---CEEEEec
Confidence 3778999999 9999999999998875 7888775
No 172
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=88.32 E-value=0.6 Score=47.15 Aligned_cols=44 Identities=25% Similarity=0.302 Sum_probs=35.0
Q ss_pred cCceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhh
Q 015637 66 QAKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASH 111 (403)
Q Consensus 66 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ 111 (403)
.|| +|.|.| ||-||++.|+++..+|+ .|+|+++..-.+.+.++.
T Consensus 8 ~~k-~i~ILGSTGSIGtqtLdVi~~~pd-~f~V~aL~ag~nv~~L~~ 52 (406)
T 1q0q_A 8 GMK-QLTILGSTGSIGCSTLDVVRHNPE-HFRVVALVAGKNVTRMVE 52 (406)
T ss_dssp -CE-EEEEETTTSHHHHHHHHHHHHCTT-TEEEEEEEESSCHHHHHH
T ss_pred Cce-eEEEEccCcHHHHHHHHHHHhCCC-ccEEEEEEcCCCHHHHHH
Confidence 465 899999 99999999999998873 699999987545554443
No 173
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=88.31 E-value=0.74 Score=47.32 Aligned_cols=103 Identities=15% Similarity=0.237 Sum_probs=62.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC---------CChhHHhhhcccccee-cccCcceeeecCCeEEEC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT---------GGVKQASHLLKYDSTL-GIFEADVKPVGTDGISVD 137 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~---------~~~~~~a~ll~yDS~~-G~f~~~v~~~~~~~l~i~ 137 (403)
..+|+|-|||-||+..++.|.+.. -.||+|.|. .|++.+..+.++...+ ++....++ .. .+
T Consensus 239 g~~VaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~-~~-----~~ 309 (456)
T 3r3j_A 239 NKKCLVSGSGNVAQYLVEKLIEKG---AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLK-YS-----KT 309 (456)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHT---CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGG-TC-----SS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhh-cC-----CC
Confidence 458999999999999999998765 678888884 2444444443222211 11111100 00 01
Q ss_pred CEEEEEEecCCCCCCCCCCcCccEEeeCC-CCcCCHhhHHHHHHcCCCeEEE
Q 015637 138 GKVIQVVSNRNPVNLPWGDLGIDLVIEGT-GVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 138 G~~I~v~~~~dp~~i~w~~~gvDiV~e~t-G~f~s~~~a~~hl~aGakkVII 188 (403)
.+ .+ ++++ .|. ..+||.+=|+ +..++.+.++.-.+.+|| +|+
T Consensus 310 a~---~v---~~~~-i~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 310 AK---YF---ENQK-PWN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp CE---EE---CSCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred ce---Ee---CCcc-ccc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 11 11 1233 264 5799999885 888898988877777884 344
No 174
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=88.26 E-value=0.38 Score=47.66 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=27.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~d~ 191 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFG---MNVLVWGR 191 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEeECHHHHHHHHHHHhCC---CEEEEECC
Confidence 458999999999999999998765 88877753
No 175
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.21 E-value=0.35 Score=44.54 Aligned_cols=25 Identities=12% Similarity=0.307 Sum_probs=22.3
Q ss_pred CceeEEEEccChhHHHHHHHHHcCC
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
|++||+|+|+|.+|+.+++.|.+..
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g 25 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKN 25 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT
T ss_pred CCCeEEEECccHHHHHHHHHHHhCC
Confidence 5679999999999999999998764
No 176
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=88.16 E-value=0.41 Score=47.10 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=27.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~G---~~V~~~d~ 196 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSFG---MKTIGYDP 196 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred cCEEEEEeECHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999998764 78877764
No 177
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=87.96 E-value=0.38 Score=47.70 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=26.8
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|.... ++|++.+.
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~G---~~V~~~dr 195 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPFG---CNLLYHDR 195 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGC---CEEEEECS
T ss_pred CCEEeEEEeCHHHHHHHHHHHHCC---CEEEEeCC
Confidence 458999999999999999998764 78776653
No 178
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=87.74 E-value=1 Score=45.78 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=29.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~ 103 (403)
..+|+|-|||-||+.+++.|.+.. ..||+|.|.
T Consensus 218 gk~vaVqG~GnVG~~~a~~L~~~G---akVVavsD~ 250 (419)
T 3aoe_E 218 GARVVVQGLGQVGAAVALHAERLG---MRVVAVATS 250 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEEET
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 368999999999999999999875 899999985
No 179
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.73 E-value=0.36 Score=43.49 Aligned_cols=31 Identities=35% Similarity=0.339 Sum_probs=27.0
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|.|+|++|+.+++.|.++. .+++.|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g---~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK---YGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999998875 68887874
No 180
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=87.67 E-value=0.46 Score=46.23 Aligned_cols=32 Identities=22% Similarity=0.470 Sum_probs=27.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|.... ++|++.+.
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d~ 177 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGFD---MDIDYFDT 177 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999998764 78877764
No 181
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=87.66 E-value=0.35 Score=47.41 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=26.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|++.+-
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~G---~~V~~~d~ 176 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGWG---ATLQYHEA 176 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTSC---CEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999987664 78877654
No 182
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=87.64 E-value=0.4 Score=47.82 Aligned_cols=32 Identities=22% Similarity=0.498 Sum_probs=26.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|.... ++|++.+.
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~fG---~~V~~~d~ 207 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGFR---ARIRVFDP 207 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTSC---CEEEEECS
T ss_pred CCEEEEecCCcccHHHHHhhhhCC---CEEEEECC
Confidence 358999999999999999987654 78876654
No 183
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.61 E-value=0.36 Score=46.57 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=27.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|.+.+.
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 153 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAFG---MRVIAYTR 153 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred cchheeeccCchhHHHHHHHHhhC---cEEEEEec
Confidence 358999999999999999998764 78877754
No 184
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=87.57 E-value=0.46 Score=46.94 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=26.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|.+.+.
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~G---~~V~~~d~ 199 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAFG---FNVLFYDP 199 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEECT
T ss_pred CCEEEEEeECHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999998764 78776653
No 185
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=87.47 E-value=0.47 Score=46.82 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=25.9
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|||+|+|+||+.+++.|.... ++|.+.+
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~G---~~V~~~d 201 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAFG---MSVRYWN 201 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 468999999999999999998764 7876554
No 186
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=87.41 E-value=1.5 Score=40.03 Aligned_cols=32 Identities=25% Similarity=0.405 Sum_probs=25.3
Q ss_pred eEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 70 kVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
||.|.| +|.||+.+++.|.++. +..+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTV-PASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTS-CGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhC-CCceEEEEEc
Confidence 588999 9999999999998761 1278877764
No 187
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=87.28 E-value=0.48 Score=45.92 Aligned_cols=31 Identities=26% Similarity=0.352 Sum_probs=26.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|||+|+|+||+.+.+.|.... ++|.+.+
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d 174 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFG---MRVVYHA 174 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC---CEEEEEC
Confidence 458999999999999999998764 7876555
No 188
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=87.21 E-value=0.94 Score=42.45 Aligned_cols=161 Identities=21% Similarity=0.200 Sum_probs=86.6
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
.||-.|+| +||.||.+.+++..+ .+++|+.-|. . +.
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~~---~~elv~~id~-----------------------~---~~-------------- 48 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSEK---GHELVLKVDV-----------------------N---GV-------------- 48 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEEET-----------------------T---EE--------------
T ss_pred cceeEEEEecCHHHHHHHHHHhCC---CCEEEEEEcC-----------------------C---Cc--------------
Confidence 46889999 899999998876544 3898766431 0 00
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEc-CCCCCCCCeEEeecCccCCCCCCCeEecCCch--hh
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT-APGKGDIPTYVVGVNADAYKPDEPIISNASCT--TN 223 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIs-aps~~dvp~vV~gVN~~~~~~~~~IISnaSCT--Tn 223 (403)
.++ . +.|+|||-|-.....+.++..++.|.+-||=| +.+.+.. -.+- .+.....++-.||=+ .|
T Consensus 49 ---~~l--~--~~DVvIDFT~P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~-~~l~-----~~a~~~~vv~apNfSlGvn 115 (228)
T 1vm6_A 49 ---EEL--D--SPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTTALKEEHL-QMLR-----ELSKEVPVVQAYNFSIGIN 115 (228)
T ss_dssp ---EEC--S--CCSEEEECSCGGGHHHHHHHHHHHTCEEEECCCSCCHHHH-HHHH-----HHTTTSEEEECSCCCHHHH
T ss_pred ---ccc--c--CCCEEEECCCHHHHHHHHHHHHHcCCCEEEeCCCCCHHHH-HHHH-----HHHhhCCEEEeccccHHHH
Confidence 011 1 46999987776677788888888887433322 2222100 0000 011113455555544 34
Q ss_pred hHHHHHHHHHhhcCeeEEEEeeeeccccchhhhhhchhhhhhhHhhhcccCCCCCChHHHHHHhccccCCceeEEEEecc
Q 015637 224 CLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVP 303 (403)
Q Consensus 224 ~Lap~lk~L~~~fGI~~~~~TTiha~tg~q~~~D~~~~d~r~~r~~a~NIIP~~tGaakav~kVlPeL~gkl~~~avRVP 303 (403)
-|.-+++-+-+.|.==.+.|.-.|- .++ .|. | .|.+..+.+.++ ..+.-.++|.|
T Consensus 116 ll~~l~~~aA~~l~~ydiEIiE~HH---~~K-~DA----------------P--SGTAl~lae~i~---~~I~i~svR~g 170 (228)
T 1vm6_A 116 VLKRFLSELVKVLEDWDVEIVETHH---RFK-KDA----------------P--SGTAILLESALG---KSVPIHSLRVG 170 (228)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEEEC---TTC-CCS----------------S--CHHHHHHHHHTT---SCCCEEEEECT
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCC---CCC-CCC----------------C--CHHHHHHHHhcc---cCCCEEEEECC
Confidence 4444444444444100233444452 122 232 2 355566666664 34667899999
Q ss_pred cccccE
Q 015637 304 TPNVSV 309 (403)
Q Consensus 304 v~~gs~ 309 (403)
-..++-
T Consensus 171 ~ivg~H 176 (228)
T 1vm6_A 171 GVPGDH 176 (228)
T ss_dssp TCCCEE
T ss_pred CCcEEE
Confidence 877754
No 189
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.19 E-value=0.51 Score=44.17 Aligned_cols=32 Identities=28% Similarity=0.403 Sum_probs=25.7
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|+|||+|+|.|.+|..+.+.|.+.. .+|..++
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 33 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGG---NDVTLID 33 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCC---CcEEEEE
Confidence 4579999999999999999998764 5776665
No 190
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=87.18 E-value=0.52 Score=47.86 Aligned_cols=33 Identities=27% Similarity=0.484 Sum_probs=29.3
Q ss_pred ceeEEEEccChhHHHHHHHHHc-CCCCCceEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHG-RKDSPLEVVAINDT 103 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~-~~~~~~evvaInd~ 103 (403)
..+|+|.|||.||+.+++.|.+ .. +.|++++|.
T Consensus 212 gktvgI~G~G~VG~~vA~~l~~~~G---~kVv~~sD~ 245 (419)
T 1gtm_A 212 GKTIAIQGYGNAGYYLAKIMSEDFG---MKVVAVSDS 245 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEEECS
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhcC---CEEEEEeCC
Confidence 3589999999999999999988 75 899999875
No 191
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=87.17 E-value=0.58 Score=45.13 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=25.8
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~ 103 (403)
|++||+|.|.|.||..++..|...+ .++ +.+-|.
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g--~~~-v~L~Di 34 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKE--LGD-IVLLDI 34 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CSE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CCe-EEEEeC
Confidence 5679999999999999999888764 247 445553
No 192
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.16 E-value=0.64 Score=39.49 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=27.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|.|.|+|.+|+.+++.|.... .+|+.+..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g---~~V~vid~ 50 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG---HSVVVVDK 50 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 358999999999999999998875 68877764
No 193
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=87.10 E-value=0.81 Score=44.43 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=26.7
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 46899999 9999999999998864 67777654
No 194
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=86.94 E-value=0.51 Score=45.60 Aligned_cols=32 Identities=22% Similarity=0.414 Sum_probs=27.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|.+.+.
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 173 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANALG---MNILLYDP 173 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CceEEEEccCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999998765 78877664
No 195
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=86.82 E-value=3.2 Score=39.17 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=26.0
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+++|.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG---RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC---CEEEEEeC
Confidence 46899999 9999999999999875 67777654
No 196
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=86.72 E-value=0.53 Score=46.03 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=27.2
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|.... ++|.+.+.
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 177 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGFG---AKVITYDI 177 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999998765 78877764
No 197
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=86.66 E-value=0.55 Score=45.53 Aligned_cols=32 Identities=28% Similarity=0.368 Sum_probs=27.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d~ 173 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAMG---MKVLAYDI 173 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999998765 78876664
No 198
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=86.64 E-value=0.82 Score=43.99 Aligned_cols=86 Identities=15% Similarity=0.200 Sum_probs=56.0
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEE-EEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVV-AINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evv-aInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
+.||+|.| .|+.|+.+++.+.+.+ +++| .||- +. .++. +.| ++++
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g---~~~V~~VnP----~~---------------------~g~~--i~G--~~vy- 59 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECG---TKIVGGVTP----GK---------------------GGQN--VHG--VPVF- 59 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTT---CCEEEEECT----TC---------------------TTCE--ETT--EEEE-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC---CeEEEEeCC----CC---------------------CCce--ECC--Eeee-
Confidence 46899999 6999999999998864 6654 4441 10 0111 233 2343
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEE
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVII 188 (403)
.+.++++- +.++|+++.++......+.++..+++|.+.+|+
T Consensus 60 -~sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 60 -DTVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp -SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -CCHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 23333321 126899999998887788888888999985554
No 199
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=86.47 E-value=0.54 Score=47.21 Aligned_cols=31 Identities=13% Similarity=0.292 Sum_probs=26.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|||+|+|+||+.+.+.|.... ++|.+.+
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~G---~~V~~~d 149 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEALG---IRTLLCD 149 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEeECHHHHHHHHHHHHCC---CEEEEEC
Confidence 358999999999999999998775 7877654
No 200
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.37 E-value=0.59 Score=42.33 Aligned_cols=33 Identities=27% Similarity=0.303 Sum_probs=25.7
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+.+||+|.|+|.+|+.+++.|.... .+|+.++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g---~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSG---FKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 3468999999999999999998764 57665553
No 201
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=86.36 E-value=0.56 Score=47.04 Aligned_cols=31 Identities=16% Similarity=0.379 Sum_probs=26.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|||+|+|+||+.+.+.|.... ++|.+.+
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~d 146 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLG---WKVLVCD 146 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 358999999999999999998765 7876554
No 202
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=86.32 E-value=0.6 Score=44.39 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=26.8
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|++||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~d 37 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG---LSTWGAD 37 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CeEEEEE
Confidence 4579999999999999999998875 6877665
No 203
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=86.32 E-value=1.7 Score=41.97 Aligned_cols=23 Identities=22% Similarity=0.232 Sum_probs=19.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
|||+|.|.|.||+.+.-.|..++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~ 23 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNL 23 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS
T ss_pred CEEEEECcCHHHHHHHHHHHhCC
Confidence 68999999999999988777654
No 204
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=86.22 E-value=0.61 Score=45.88 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=26.4
Q ss_pred ceeEEEEccChhHHHHHHHHH-cCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWH-GRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~-~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|. ... ++|++.+.
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~G---~~V~~~d~ 195 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGLG---MKLVYYDV 195 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEECS
T ss_pred CCEEEEEEECHHHHHHHHHHHHhcC---CEEEEECC
Confidence 358999999999999999998 764 78776653
No 205
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=86.21 E-value=0.86 Score=45.32 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=27.2
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~ 103 (403)
.+|+|.|||.||+.+++.|.+.. ..|+ +.|.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~G---akVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAG---AQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEE-EEeC
Confidence 58999999999999999999875 7888 7774
No 206
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=86.18 E-value=2.1 Score=43.86 Aligned_cols=33 Identities=39% Similarity=0.693 Sum_probs=29.8
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~ 103 (403)
..||+|-|||-||+.+++.|.+.. ..||+|.|.
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~G---akvVavsD~ 267 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDHG---ARVVAVQDH 267 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECS
T ss_pred CCEEEEeccCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 468999999999999999999875 899999995
No 207
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.15 E-value=0.44 Score=43.24 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=26.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++||+|+|.|.+|+.+++.|.+.. ++|+.+.+
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g---~~V~~v~~ 54 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ---IPAIIANS 54 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT---CCEEEECT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 479999999999999999998764 67766454
No 208
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=86.04 E-value=0.59 Score=47.14 Aligned_cols=31 Identities=23% Similarity=0.246 Sum_probs=26.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|||+|+|+||+.+.+.+.... ++|++.+
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~G---~~V~~~d 175 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESLG---MYVYFYD 175 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEeECHHHHHHHHHHHHCC---CEEEEEc
Confidence 358999999999999999998765 8876655
No 209
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=85.94 E-value=0.45 Score=48.94 Aligned_cols=30 Identities=27% Similarity=0.392 Sum_probs=25.8
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.||||+|.|.+|..+...+.... ++|+..+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG---~~V~l~D 84 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAG---IETFLVV 84 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEE
Confidence 48999999999999999998775 7877664
No 210
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.90 E-value=0.53 Score=40.99 Aligned_cols=32 Identities=28% Similarity=0.318 Sum_probs=27.2
Q ss_pred ceeEEEEccChhHHHHHHHHHcC-CCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGR-KDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~-~~~~~evvaInd 102 (403)
..+|.|.|+|++|+.+++.|.+. . .+|++++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g---~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG---KISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC---SCEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC---CeEEEEEC
Confidence 56899999999999999999876 5 68887764
No 211
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=85.82 E-value=0.58 Score=45.57 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=26.5
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.++|||+|+|+||+.+++.|.... ++|++.+.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G---~~V~~~d~ 186 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFG---VQRFLYTG 186 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGT---CCEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999998764 67776653
No 212
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=85.81 E-value=1.2 Score=42.79 Aligned_cols=88 Identities=19% Similarity=0.226 Sum_probs=57.2
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEE-EEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVV-AINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evv-aInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
+.||+|.| .|+.|+.+++.+.+.+ +++| .||- +. .++. +.| ++++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g---~~~v~~VnP----~~---------------------~g~~--i~G--~~vy- 59 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYG---TKVVAGVTP----GK---------------------GGSE--VHG--VPVY- 59 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECT----TC---------------------TTCE--ETT--EEEE-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC---CcEEEEeCC----CC---------------------CCce--ECC--Eeee-
Confidence 46899999 6999999999988764 6654 4441 10 0111 223 2343
Q ss_pred cCCCCCCCCCCcC-ccEEeeCCCCcCCHhhHHHHHHcCCCeEEE-cC
Q 015637 146 NRNPVNLPWGDLG-IDLVIEGTGVFVDREGAGKHIQAGAKKVLI-TA 190 (403)
Q Consensus 146 ~~dp~~i~w~~~g-vDiV~e~tG~f~s~~~a~~hl~aGakkVII-sa 190 (403)
.+.++++- +.+ +|+++.++......+.++..+++|.+.+|+ |.
T Consensus 60 -~sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 60 -DSVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp -SSHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred -CCHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 22333321 113 899999999888888888899999985555 43
No 213
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=85.78 E-value=1.7 Score=44.29 Aligned_cols=33 Identities=30% Similarity=0.404 Sum_probs=29.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~ 103 (403)
..+|+|-|||-||+.+++.|.+.. ..||+|.|.
T Consensus 210 gk~vaVqG~GnVG~~aa~~L~e~G---akVVavsD~ 242 (421)
T 1v9l_A 210 GKTVAIQGMGNVGRWTAYWLEKMG---AKVIAVSDI 242 (421)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEEECC
Confidence 368999999999999999998875 899999995
No 214
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=85.57 E-value=0.66 Score=45.26 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=26.9
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|.... ++|++.+.
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G---~~V~~~d~ 181 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFN---MRILYYSR 181 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC---CEEEEECC
Confidence 358999999999999999998765 78776654
No 215
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=85.57 E-value=1.2 Score=45.78 Aligned_cols=100 Identities=17% Similarity=0.247 Sum_probs=61.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC---------CChhHHhhhccc-cceecccCcceeeecCCeEEEC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT---------GGVKQASHLLKY-DSTLGIFEADVKPVGTDGISVD 137 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~---------~~~~~~a~ll~y-DS~~G~f~~~v~~~~~~~l~i~ 137 (403)
..+|+|=|||-||..+++.|.+.. -.||++.|. .+.+.+..+++. .+..|+.....+ + .+
T Consensus 235 Gk~vaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~--~-----~g 304 (450)
T 4fcc_A 235 GMRVSVSGSGNVAQYAIEKAMEFG---ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAK--E-----FG 304 (450)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHH--H-----HT
T ss_pred CCEEEEeCCChHHHHHHHHHHhcC---CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccc--c-----CC
Confidence 468999999999999999999875 689999873 234444444421 111111110000 0 01
Q ss_pred CEEEEEEecCCCCCCCCCCcCccEEeeCC-CCcCCHhhHHHHHHcCCCe
Q 015637 138 GKVIQVVSNRNPVNLPWGDLGIDLVIEGT-GVFVDREGAGKHIQAGAKK 185 (403)
Q Consensus 138 G~~I~v~~~~dp~~i~w~~~gvDiV~e~t-G~f~s~~~a~~hl~aGakk 185 (403)
.+ .+. +++ .|. ..+||.+=|+ +..++.+.++.-.+.|+|-
T Consensus 305 ~~---~~~---~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~ 345 (450)
T 4fcc_A 305 LV---YLE---GQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVKA 345 (450)
T ss_dssp CE---EEE---TCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE
T ss_pred cE---Eec---Ccc-ccc-CCccEEeeccccccccHHHHHHHHhcCceE
Confidence 11 111 222 264 5799999885 8888999898777778853
No 216
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=85.52 E-value=0.6 Score=45.80 Aligned_cols=31 Identities=23% Similarity=0.261 Sum_probs=25.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|||+|+|+||+.+++.|.... ++|.+.+
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G---~~V~~~d 194 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFD---CPISYFS 194 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEC
Confidence 358999999999999999998764 6765544
No 217
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=85.47 E-value=2 Score=41.72 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=25.7
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|++||+|.|.|.+|..+..+|.... .++ |.+-|
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g--~~~-V~L~D 45 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKD--LGD-VYMFD 45 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCE-EEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CCe-EEEEE
Confidence 5679999999999999998888764 137 44545
No 218
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=85.43 E-value=1.2 Score=44.00 Aligned_cols=27 Identities=26% Similarity=0.396 Sum_probs=20.2
Q ss_pred cccC-ceeEEEEc-cChhHHHHHHHHHcC
Q 015637 64 AAQA-KLKVAING-FGRIGRNFLRCWHGR 90 (403)
Q Consensus 64 ~~~m-~ikVaInG-fGrIGr~vlr~l~~~ 90 (403)
+..| ++||+|.| .|.||+.++-+|...
T Consensus 19 ~~s~~~vKVaViGAaG~IG~~la~~la~~ 47 (345)
T 4h7p_A 19 PGSMSAVKVAVTGAAGQIGYALVPLIARG 47 (345)
T ss_dssp ---CCCEEEEEESTTSHHHHHHHHHHHHT
T ss_pred CCCCCCCEEEEECcCcHHHHHHHHHHHhc
Confidence 4445 68999999 699999998777654
No 219
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=85.31 E-value=0.62 Score=46.91 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=26.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|.... ++|.+.+.
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~G---~~V~~~d~ 222 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPFD---VHLHYTDR 222 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGT---CEEEEECS
T ss_pred CCEEEEEeECHHHHHHHHHHHhCC---CEEEEEcC
Confidence 358999999999999999998764 78876654
No 220
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.30 E-value=0.64 Score=45.45 Aligned_cols=32 Identities=25% Similarity=0.271 Sum_probs=26.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+++.|.... ++|++.+.
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G---~~V~~~d~ 177 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFG---VKLYYWSR 177 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGT---CEEEEECS
T ss_pred cCEEEEEccCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999998764 78776654
No 221
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=84.95 E-value=0.55 Score=44.60 Aligned_cols=31 Identities=19% Similarity=0.261 Sum_probs=26.2
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
++||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G---~~V~~~d 45 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP---GGVTVYD 45 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST---TCEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC---CeEEEEe
Confidence 579999999999999999998764 6776664
No 222
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=84.94 E-value=1.5 Score=47.52 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=25.5
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.||||+|.|.+|..+...+.... ++|+.++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG---~~V~l~D 342 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSN---YPVILKE 342 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred cEEEEEcCCHhhHHHHHHHHhCC---CEEEEEE
Confidence 48999999999999999998765 7877665
No 223
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.17 E-value=0.93 Score=43.07 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=26.9
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|+|+|+|+||+.+++.|.... ++|.+.+.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~dr 186 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALG---AKVKVGAR 186 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 358999999999999999998765 68776664
No 224
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=84.15 E-value=0.57 Score=43.79 Aligned_cols=30 Identities=13% Similarity=0.212 Sum_probs=25.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+||+|+|+|.+|+.+++.|.... ++|+.++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAG---HQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTT---CEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCC---CEEEEEc
Confidence 69999999999999999998764 6765444
No 225
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.03 E-value=0.88 Score=43.70 Aligned_cols=29 Identities=28% Similarity=0.317 Sum_probs=23.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc--eEEEE
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL--EVVAI 100 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~--evvaI 100 (403)
+||+|.|.|.+|..++..|...+ + +|+-+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g---~~~eV~L~ 31 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRG---SCSELVLV 31 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCCEEEEE
Confidence 48999999999999999888764 4 66544
No 226
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=83.95 E-value=0.83 Score=46.40 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=26.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|||+|+|+||+.+.+.+.... ++|.+.+
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~G---~~V~~yd 186 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESLG---MTVRYYD 186 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC---CEEEEEC
Confidence 358999999999999999998775 8877665
No 227
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=83.91 E-value=0.86 Score=41.91 Aligned_cols=29 Identities=17% Similarity=0.414 Sum_probs=23.6
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEE
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAI 100 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaI 100 (403)
|||+|+|+|.+|+.+++.|...+ .+|...
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g---~~v~~~ 32 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP---HELIIS 32 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS---CEEEEE
T ss_pred cEEEEECCCHHHHHHHHHHHhCC---CeEEEE
Confidence 69999999999999999998654 455434
No 228
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=83.85 E-value=1.1 Score=39.27 Aligned_cols=31 Identities=39% Similarity=0.483 Sum_probs=27.1
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEc
Confidence 4799999 9999999999999875 78887765
No 229
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=83.85 E-value=0.79 Score=46.21 Aligned_cols=37 Identities=24% Similarity=0.443 Sum_probs=30.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHh
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQAS 110 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a 110 (403)
.+|.|.|+|++|+.+.+.|.++. +++++|.. +++.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g---~~vvvId~--d~~~v~ 41 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG---VKMVVLDH--DPDHIE 41 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCEEEEEC--CHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC---CCEEEEEC--CHHHHH
Confidence 57999999999999999999875 78888874 455443
No 230
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=83.85 E-value=2.6 Score=40.34 Aligned_cols=31 Identities=32% Similarity=0.370 Sum_probs=24.7
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEE
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAI 100 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaI 100 (403)
+++||+|+|.|.+|..+...|.+.. .+|..+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G---~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAG---HEVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCC---CeEEEE
Confidence 3579999999999999999998764 566655
No 231
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=83.81 E-value=0.85 Score=46.47 Aligned_cols=41 Identities=22% Similarity=0.382 Sum_probs=30.8
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhh
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHL 112 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~l 112 (403)
|+|||+|+|.|.+|..+...|.+.. ++|+.++- +.+.+..+
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G---~~V~~~D~--~~~~v~~l 41 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELG---ANVRCIDT--DRNKIEQL 41 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS--CHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcC---CEEEEEEC--CHHHHHHH
Confidence 5679999999999999999998875 78876652 44444333
No 232
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=83.80 E-value=1.7 Score=41.80 Aligned_cols=82 Identities=18% Similarity=0.245 Sum_probs=49.2
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~d 148 (403)
-+|.|+|.|.||...++++.... .+|+++... .+.+..+.+ +| -+. ++ .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~--~~~~~~~~~----lG----------a~~---------v~--~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG---AEVSVFARN--EHKKQDALS----MG----------VKH---------FY--TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEEECSS--STTHHHHHH----TT----------CSE---------EE--SS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC---CeEEEEeCC--HHHHHHHHh----cC----------CCe---------ec--CC
Confidence 47999999999999999988765 588776532 222222221 11 010 11 22
Q ss_pred CCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCC
Q 015637 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGA 183 (403)
Q Consensus 149 p~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGa 183 (403)
++.+ . .++|+||||+|.....+.+-..++.|.
T Consensus 228 ~~~~--~-~~~D~vid~~g~~~~~~~~~~~l~~~G 259 (348)
T 3two_A 228 PKQC--K-EELDFIISTIPTHYDLKDYLKLLTYNG 259 (348)
T ss_dssp GGGC--C-SCEEEEEECCCSCCCHHHHHTTEEEEE
T ss_pred HHHH--h-cCCCEEEECCCcHHHHHHHHHHHhcCC
Confidence 3322 2 289999999997755555555554443
No 233
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=83.70 E-value=0.72 Score=45.75 Aligned_cols=31 Identities=23% Similarity=0.229 Sum_probs=25.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCce-EEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLE-VVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~e-vvaIn 101 (403)
..+|||+|+|+||+.+++.|.... ++ |.+.+
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~G---~~~V~~~d 195 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPFN---PKELLYYD 195 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGC---CSEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC---CcEEEEEC
Confidence 358999999999999999998764 75 76665
No 234
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.42 E-value=1.1 Score=39.38 Aligned_cols=31 Identities=32% Similarity=0.445 Sum_probs=26.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEe
Confidence 4799999 9999999999999875 68887764
No 235
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=83.30 E-value=1.1 Score=42.76 Aligned_cols=32 Identities=25% Similarity=0.307 Sum_probs=26.9
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|+|+|+|+||+.+++.|.... ++|.+.+.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~d~ 188 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALG---ANVKVGAR 188 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC---CEEEEEEC
Confidence 358999999999999999998775 68776664
No 236
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.28 E-value=0.92 Score=42.53 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=25.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
++||+|+|+|.+|+.+++.|.... ++|+.++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 34 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG---VTVYAFD 34 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CeEEEEe
Confidence 469999999999999999998764 6776554
No 237
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=83.19 E-value=1.1 Score=41.17 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=26.5
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+.+||||+|+|.+|+.+.+.|.... ++|+..+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G---~~V~~~~ 49 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLG---HEVTIGT 49 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3579999999999999999998875 6776665
No 238
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=83.07 E-value=0.38 Score=45.07 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=27.5
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.+|||+|+|.|.+|..+.+.|.+.. ++|++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G---~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVG---HYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTT---CEEEECSS
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCC---CEEEEecC
Confidence 3469999999999999999998875 78776654
No 239
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.77 E-value=1.1 Score=45.76 Aligned_cols=40 Identities=18% Similarity=0.373 Sum_probs=31.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhh
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHL 112 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~l 112 (403)
.|||-|.|+|++|+.+++.|.++. .+|+.|.. +++.+..+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~---~~v~vId~--d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN---NDITIVDK--DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT---EEEEEEES--CHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC---CCEEEEEC--CHHHHHHH
Confidence 479999999999999999998764 78888874 45554443
No 240
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=82.76 E-value=0.96 Score=36.82 Aligned_cols=30 Identities=30% Similarity=0.518 Sum_probs=25.1
Q ss_pred eEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 70 kVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+|.|.|.|.+|+.+++.|.+.. .+|+.+..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g---~~v~~~d~ 37 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMG---HEVLAVDI 37 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT---CCCEEEES
T ss_pred cEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 6999999999999999998764 56666653
No 241
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=82.67 E-value=1 Score=43.27 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=26.4
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.+||+|+|+|.+|+.+.+.|.... ++|+..+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~d 61 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG---YALQVWN 61 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHhCC---CeEEEEc
Confidence 469999999999999999998875 7876665
No 242
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=82.63 E-value=1.1 Score=43.65 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=25.5
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|.|.|.||...++++.... ..|+++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~ 219 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFG---SKVTVIST 219 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 37999999999999999988764 57776653
No 243
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=82.41 E-value=1.1 Score=41.93 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=25.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G---~~V~~~d 31 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG---CSVTIWN 31 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC---CeEEEEc
Confidence 58999999999999999998875 6876554
No 244
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=82.28 E-value=2.4 Score=41.65 Aligned_cols=23 Identities=13% Similarity=0.075 Sum_probs=20.5
Q ss_pred eeEEEEccChhHHHHHHHHHcCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
+||+|.|.|.||..++..+..++
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g 44 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKD 44 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 69999999999999999887664
No 245
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=82.24 E-value=1.2 Score=41.38 Aligned_cols=30 Identities=20% Similarity=0.427 Sum_probs=25.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|||+|+|+|.+|+.+.+.|.... ++|+.++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 30 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG---HYLIGVS 30 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 48999999999999999998764 6776664
No 246
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=82.20 E-value=1.3 Score=41.26 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=27.2
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|-| +|-||+.+++.|.++. .+|+++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 9999999999999875 78887764
No 247
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=82.01 E-value=1.4 Score=38.91 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=26.1
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||+|.| .|.+|+.+++.|.++. .+|+.++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 4899999 9999999999998764 68776653
No 248
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=82.01 E-value=2.1 Score=38.21 Aligned_cols=32 Identities=28% Similarity=0.295 Sum_probs=25.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCc-eEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPL-EVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~-evvaInd 102 (403)
++|.|-| +|.||+.+++.|.+++ .+ +|+++..
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G--~~~~V~~~~r 52 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQG--LFSKVTLIGR 52 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHT--CCSEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHcCC--CCCEEEEEEc
Confidence 5799999 9999999999998875 12 7776654
No 249
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=82.00 E-value=1 Score=42.94 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=26.7
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+.+||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G---~~V~~~d 39 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQG---KRVAIWN 39 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3469999999999999999998875 6776665
No 250
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=81.87 E-value=3.7 Score=41.78 Aligned_cols=33 Identities=27% Similarity=0.562 Sum_probs=29.5
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~ 103 (403)
..+|+|-|||-||+.+++.|.+.. ..||+|.|.
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~G---akVVavsD~ 253 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDAG---AKVIGISDA 253 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT---CEEEEEECS
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECC
Confidence 468999999999999999998865 799999995
No 251
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=81.45 E-value=1.3 Score=42.46 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=25.9
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|++||+|.|.|.+|..+...|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTG---HCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 6789999999999999999998764 57666654
No 252
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=81.13 E-value=1.3 Score=42.22 Aligned_cols=30 Identities=20% Similarity=0.339 Sum_probs=26.0
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G---~~V~~~d 51 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNG---FKVTVWN 51 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCC---CeEEEEe
Confidence 69999999999999999998875 6877665
No 253
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=81.08 E-value=0.77 Score=44.39 Aligned_cols=24 Identities=25% Similarity=0.275 Sum_probs=20.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
..||.|+|.|.+|..++..|....
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aG 59 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCG 59 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCeEEEECcCHHHHHHHHHHHHcC
Confidence 358999999999999999887643
No 254
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=81.06 E-value=1.4 Score=39.59 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=24.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAI 100 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaI 100 (403)
.+||+|+|+|.+|+.+.+.|.+.. .+|..+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g---~~V~~~ 48 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG---HEVTYY 48 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEE
Confidence 468999999999999999998764 575433
No 255
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=80.88 E-value=1.3 Score=43.72 Aligned_cols=31 Identities=23% Similarity=0.513 Sum_probs=26.8
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
++||||+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G---~~V~v~d 52 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG---HECVVYD 52 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHhCC---CEEEEEe
Confidence 479999999999999999999875 7877665
No 256
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=80.81 E-value=1.3 Score=41.82 Aligned_cols=30 Identities=13% Similarity=0.220 Sum_probs=26.0
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d 33 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG---YLLNVFD 33 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHhCC---CeEEEEc
Confidence 59999999999999999998875 6877664
No 257
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=80.51 E-value=4.6 Score=40.09 Aligned_cols=34 Identities=18% Similarity=0.435 Sum_probs=28.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChh
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVK 107 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~ 107 (403)
.+|+|.|+|.||+.+++.|.+.. .+|+ +.|. +++
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G---akVv-v~D~-~~~ 207 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG---AKLV-VTDV-NKA 207 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEE-EECS-CHH
T ss_pred CEEEEECchHHHHHHHHHHHHCC---CEEE-EEcC-CHH
Confidence 57999999999999999999875 7877 6664 444
No 258
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.30 E-value=1.6 Score=42.05 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=27.3
Q ss_pred cCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 66 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.|.+||||+|+|.+|..+.+.|.+.. .++|+..+
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L~~~G--~~~V~~~d 55 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGLGGRN--AARLAAYD 55 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHTTT--CSEEEEEC
T ss_pred ccCCeEEEECccHHHHHHHHHHHHcC--CCeEEEEe
Confidence 36789999999999999999998753 15766555
No 259
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=80.12 E-value=1.6 Score=41.52 Aligned_cols=32 Identities=22% Similarity=0.472 Sum_probs=25.8
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|..||+|+| +|.||..+.+.|.... ++|..++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G---~~V~~~~ 52 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG---YPISILD 52 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC---CeEEEEE
Confidence 556999999 9999999999998764 5665554
No 260
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=80.01 E-value=3.7 Score=42.29 Aligned_cols=30 Identities=17% Similarity=0.305 Sum_probs=26.3
Q ss_pred eeEEEEccChhHHHHHHHHHcC-CCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGR-KDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~-~~~~~-evvaIn 101 (403)
+||+|+|.|.+|..+...|.+. . + +|+.++
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G---~~~V~~~D 50 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPC---FEKVLGFQ 50 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTT---CCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCC---CCeEEEEE
Confidence 6999999999999999999887 4 7 887775
No 261
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.92 E-value=1.6 Score=40.59 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=24.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+||+|+|+|.+|+.+.+.|..... ..+|++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d 33 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYD 33 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC-CSEEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCC-CcEEEEEe
Confidence 489999999999999999987641 13766554
No 262
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=79.49 E-value=1.6 Score=41.41 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=25.4
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
++||+|+|+|.+|+.+.+.|.... ++|..++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g---~~V~~~~ 60 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG---HTVTVWN 60 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC---CEEEEEe
Confidence 368999999999999999998764 5765554
No 263
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=79.47 E-value=1.5 Score=45.51 Aligned_cols=32 Identities=28% Similarity=0.299 Sum_probs=27.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~G---~~V~~~d~ 173 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAFG---AYVVAYDP 173 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEECT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC---CEEEEECC
Confidence 468999999999999999998764 78877754
No 264
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=79.44 E-value=2.6 Score=40.65 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=24.5
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+++||+|.|.|.||..++..|...+. --+|+.+.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~-~~ev~l~D 38 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGI-ADEIVLID 38 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC-CCEEEEEe
Confidence 34699999999999999988876531 11565443
No 265
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=79.38 E-value=1.3 Score=41.39 Aligned_cols=30 Identities=13% Similarity=0.347 Sum_probs=24.8
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|||+|+|+|.+|+.+.+.|.... ++|...+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g---~~V~~~~ 30 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG---YPLIIYD 30 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT---CCEEEEC
T ss_pred CeEEEEeccHHHHHHHHHHHHCC---CEEEEEe
Confidence 48999999999999999998764 5766554
No 266
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=79.30 E-value=2.8 Score=40.46 Aligned_cols=24 Identities=33% Similarity=0.297 Sum_probs=21.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
++||+|.|.|.||..++-.|..++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~ 30 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQ 30 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC
Confidence 479999999999999998888764
No 267
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=79.24 E-value=1 Score=44.63 Aligned_cols=92 Identities=18% Similarity=0.165 Sum_probs=53.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
..||+|.|.|.+|+.+++.|.+. .+|+..+. +++.+..+.+ . . ..+.+ ...
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~----~~V~V~~R--~~~~a~~la~--~-------------~-------~~~~~-d~~ 66 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE----FDVYIGDV--NNENLEKVKE--F-------------A-------TPLKV-DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT----SEEEEEES--CHHHHHHHTT--T-------------S-------EEEEC-CTT
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC----CeEEEEEC--CHHHHHHHHh--h-------------C-------CeEEE-ecC
Confidence 36999999999999999999764 46554442 3443332221 0 0 00111 001
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsa 190 (403)
+++++.=--.++|+||.|++.....+-+...+++|+ .+++.
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~--~~vD~ 107 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDV 107 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTC--CEEEC
T ss_pred CHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCC--eEEEc
Confidence 111110001268999999987666666777888887 45543
No 268
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=79.22 E-value=1.7 Score=41.83 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=26.8
Q ss_pred cCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 66 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-|.+||+|+|.|.+|..+.+.|.+.. .+|..++.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G---~~V~~~~r 45 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENG---EEVILWAR 45 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 57889999999999999999998764 57665653
No 269
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.22 E-value=1.7 Score=41.63 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=25.8
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
++||+|+|.|.+|..+.+.|.... .+|..++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g---~~V~~~~ 34 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKG---QSVLAWD 34 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 369999999999999999998764 6776664
No 270
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=79.13 E-value=9.4 Score=39.62 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=29.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~ 103 (403)
..+|+|-|||-||+..++.|.+.. -.||+|.|.
T Consensus 244 g~tVaVQG~GNVG~~aa~~L~e~G---akVVavsDs 276 (501)
T 3mw9_A 244 DKTFVVQGFGNVGLHSMRYLHRFG---AKCITVGES 276 (501)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 468999999999999999999875 799999873
No 271
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=78.90 E-value=1.4 Score=42.69 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=26.1
Q ss_pred Cce-eEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKL-KVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~i-kVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|+| ||+|+|.|.+|..+...|.... .+|..++
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~G---~~V~~~~ 45 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKKC---REVCVWH 45 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTTE---EEEEEEC
T ss_pred hccCeEEEECCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 545 9999999999999999997654 6776665
No 272
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=78.64 E-value=1.4 Score=42.14 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=27.1
Q ss_pred cCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 66 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.|.-|||++|+|.+|..+.+.|.+.. ++|++-|
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G---~~V~v~d 35 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAG---YELVVWN 35 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTT---CEEEEC-
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCC---CeEEEEe
Confidence 36669999999999999999999875 7876555
No 273
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=78.63 E-value=1.6 Score=42.95 Aligned_cols=37 Identities=32% Similarity=0.399 Sum_probs=28.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHH
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQA 109 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~ 109 (403)
..||+|+|+|.||..+.+.|.... .+|++.+- +++.+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G---~~V~~~dr--~~~~~ 44 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN---HSVFGYNR--SRSGA 44 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT---CCEEEECS--CHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC---CEEEEEeC--CHHHH
Confidence 458999999999999999998774 67766653 44444
No 274
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=78.32 E-value=1.5 Score=40.74 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=24.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+||+|+|+|.+|+.+.+.|.. . ++|+.++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g---~~V~~~~ 30 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-R---FPTLVWN 30 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-T---SCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHhC-C---CeEEEEe
Confidence 589999999999999999987 5 6766554
No 275
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=78.25 E-value=1.1 Score=42.45 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=23.7
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|++||+|+|.|.+|..+...|.+.. .+|..+.
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g---~~V~~~~ 32 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSL---PHTTLIG 32 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHC---TTCEEEE
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCC---CeEEEEE
Confidence 6789999999999999999887653 3444444
No 276
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=78.01 E-value=1.8 Score=44.91 Aligned_cols=31 Identities=16% Similarity=0.337 Sum_probs=26.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|+|+|+|+||+.+++.|.... ++|++.+
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~G---~~V~v~d 307 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGLG---ATVWVTE 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEEe
Confidence 358999999999999999998765 7877665
No 277
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=78.01 E-value=2 Score=39.63 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=25.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||+|+|.|.+|..+...|.+.. .+|..++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG---HEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC---CCEEEEEc
Confidence 48999999999999999998764 57766653
No 278
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=77.98 E-value=1.5 Score=41.91 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=24.5
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|++||+|.|.|.+|..+...|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSG---EDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTS---CCEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC---CeEEEEEc
Confidence 6689999999999999999998764 46655553
No 279
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=77.97 E-value=1.9 Score=39.76 Aligned_cols=31 Identities=26% Similarity=0.415 Sum_probs=26.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+||.|.|.|.||+.+++.|.+++ .+|+++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQG---HEVTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999999875 68877764
No 280
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=77.87 E-value=2.4 Score=37.50 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=25.7
Q ss_pred ee-EEEEc-cChhHHHHHHHHH-cCCCCCceEEEEec
Q 015637 69 LK-VAING-FGRIGRNFLRCWH-GRKDSPLEVVAIND 102 (403)
Q Consensus 69 ik-VaInG-fGrIGr~vlr~l~-~~~~~~~evvaInd 102 (403)
+| |.|.| +|.||+.+++.|. ++. .+|+++..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~r 38 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTD---MHITLYGR 38 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEES
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEec
Confidence 45 99999 9999999999998 664 68877654
No 281
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=77.85 E-value=1.7 Score=42.33 Aligned_cols=23 Identities=26% Similarity=0.573 Sum_probs=20.4
Q ss_pred eeEEEEccChhHHHHHHHHHcCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
|||+|.|.|.||..++..+..++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~ 23 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQD 23 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 58999999999999999887664
No 282
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=79.12 E-value=0.46 Score=42.91 Aligned_cols=32 Identities=22% Similarity=0.088 Sum_probs=24.8
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|.+||+|+|+|.+|+.+.+.|.+.. .+|..++
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G---~~V~~~~ 49 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCG---YSVVFGS 49 (201)
Confidence 4568999999999999999887653 5654443
No 283
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=77.41 E-value=1.6 Score=37.98 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=26.6
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
|.+||.|.| +|.||+.+++.|.+++ .+ +|+++.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g--~~~~V~~~~ 38 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEP--TLAKVIAPA 38 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCT--TCCEEECCB
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCC--CCCeEEEEe
Confidence 557899999 9999999999999875 22 776554
No 284
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=77.28 E-value=2.2 Score=39.69 Aligned_cols=32 Identities=19% Similarity=0.364 Sum_probs=26.5
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|.++|.|-| +|.||+.+++.|.++. .+|+++.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCG 33 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEc
Confidence 456899999 9999999999999875 6877664
No 285
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=77.07 E-value=2 Score=44.01 Aligned_cols=94 Identities=17% Similarity=0.119 Sum_probs=53.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~d 148 (403)
.||.|.|.|.+|+.+++.|.+++ .++|+.++. +.+....+.+. .+ +. .+.+ ...+
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~--g~~V~v~~R--~~~ka~~la~~---~~-----~~------------~~~~-D~~d 78 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAAND--DINVTVACR--TLANAQALAKP---SG-----SK------------AISL-DVTD 78 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTST--TEEEEEEES--SHHHHHHHHGG---GT-----CE------------EEEC-CTTC
T ss_pred CEEEEECChHHHHHHHHHHHhCC--CCeEEEEEC--CHHHHHHHHHh---cC-----Cc------------EEEE-ecCC
Confidence 58999999999999999999863 278766654 23332222210 00 00 0111 0111
Q ss_pred CCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEc
Q 015637 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (403)
Q Consensus 149 p~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIs 189 (403)
++.+.-.-.++|+||.|+|.+.....+...+++|. .+++
T Consensus 79 ~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~--~vvd 117 (467)
T 2axq_A 79 DSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKT--DVVT 117 (467)
T ss_dssp HHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTC--EEEE
T ss_pred HHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCC--EEEE
Confidence 11110000268999999998765555556677776 4443
No 286
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=77.01 E-value=2.9 Score=42.46 Aligned_cols=30 Identities=20% Similarity=0.190 Sum_probs=24.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.+|.|.|.|.||+.+++.|.+.+ .+|+.++
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G---~~V~v~~ 33 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSG---IKVTVAC 33 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEE
Confidence 47999999999999999998754 6765554
No 287
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=76.99 E-value=2 Score=39.76 Aligned_cols=33 Identities=30% Similarity=0.448 Sum_probs=27.4
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|++||.|-| +|.||+.+++.|.+++ .+|+++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG---EEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 457999999 8999999999999875 68777754
No 288
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=76.82 E-value=1.8 Score=42.32 Aligned_cols=31 Identities=29% Similarity=0.385 Sum_probs=25.2
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|+|.|.||...++++.... ..|+++..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~G---a~Vi~~~~ 226 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMG---AHVVAFTT 226 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 37999999999999999988765 57766653
No 289
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=76.59 E-value=2.7 Score=43.21 Aligned_cols=42 Identities=29% Similarity=0.334 Sum_probs=32.9
Q ss_pred eeEEEEc-cChhHHHHHHHHHc---CCCCCceEEEEecCCChhHHhh
Q 015637 69 LKVAING-FGRIGRNFLRCWHG---RKDSPLEVVAINDTGGVKQASH 111 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~---~~~~~~evvaInd~~~~~~~a~ 111 (403)
.||.|.| ||-||.+.|+++.+ +|+ .|+|+++..-.+.+.++.
T Consensus 78 k~I~ILGSTGSIGtqTLdVi~~~p~~pd-~f~V~aLaAg~Nv~lL~e 123 (488)
T 3au8_A 78 INVAIFGSTGSIGTNALNIIRECNKIEN-VFNVKALYVNKSVNELYE 123 (488)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHHHHSC-CEEEEEEEESSCHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHcccCCCC-eEEEEEEEcCCCHHHHHH
Confidence 4799999 99999999999987 442 599999987445554443
No 290
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=76.05 E-value=5.8 Score=36.69 Aligned_cols=31 Identities=13% Similarity=0.193 Sum_probs=24.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.+|-|+|.|.+|..-++.|.+.+ -+|+.|+.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G---A~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG---AAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC---CCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999998764 35554554
No 291
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=75.77 E-value=2.8 Score=38.97 Aligned_cols=31 Identities=26% Similarity=0.294 Sum_probs=25.8
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.+||.|.| +|.||+.+++.|.++. .+|+++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g---~~v~~~~ 34 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRG---DVELVLR 34 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT---TEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEe
Confidence 46899999 9999999999998875 6776654
No 292
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=75.75 E-value=0.75 Score=43.15 Aligned_cols=23 Identities=30% Similarity=0.566 Sum_probs=17.8
Q ss_pred CceeEEEEccChhHHHHHHHHHc
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHG 89 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~ 89 (403)
|+|||+|+|.|.+|+.+++.|..
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC-
T ss_pred CCceEEEEeCCHHHHHHHHHHHH
Confidence 55799999999999999988764
No 293
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=75.74 E-value=1.3 Score=37.11 Aligned_cols=31 Identities=13% Similarity=0.222 Sum_probs=24.5
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..||+|.|+|.+|+.+++.|..++ ++| .+-+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g---~~v-~v~~ 51 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQ---YKV-TVAG 51 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTT---CEE-EEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEE-EEEc
Confidence 458999999999999999887754 774 4444
No 294
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=75.62 E-value=2 Score=43.77 Aligned_cols=31 Identities=19% Similarity=0.315 Sum_probs=26.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
++||||+|+|.+|+.+.+.|.+.. ++|...|
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G---~~V~v~d 35 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG---YTVAIYN 35 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC---CEEEEEc
Confidence 468999999999999999998775 6766555
No 295
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=75.46 E-value=1.6 Score=40.99 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=25.2
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+||+|+|+|.+|+.+.+.|.+.. ++|...+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d 31 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG---FDVTVWN 31 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT---CCEEEEC
T ss_pred CeEEEEccCHHHHHHHHHHHHCC---CeEEEEc
Confidence 48999999999999999998764 6766564
No 296
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=75.22 E-value=1.9 Score=44.62 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=26.2
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|+|+|+|+||+.+++.|.... ++|++.+
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~G---~~Viv~d 287 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGLG---ARVYITE 287 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCc---CEEEEEe
Confidence 358999999999999999998764 7877665
No 297
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=75.03 E-value=2 Score=41.08 Aligned_cols=31 Identities=16% Similarity=0.300 Sum_probs=25.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
++||||+|+|.+|+.+.+.|.+.. + +|+..+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G---~~~V~~~d 55 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG---AIDMAAYD 55 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS---CCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CCeEEEEc
Confidence 369999999999999999998764 6 665444
No 298
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=74.93 E-value=2.4 Score=43.61 Aligned_cols=30 Identities=17% Similarity=0.344 Sum_probs=25.2
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|+|.|+|+||+.+++.+.... ++|++.+
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG---a~Viv~d 277 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG---ARVKVTE 277 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEe
Confidence 48999999999999999998775 7766543
No 299
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=74.92 E-value=2.4 Score=43.29 Aligned_cols=31 Identities=19% Similarity=0.389 Sum_probs=25.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|+|+|+|+||+.+++.|.... ++|++.+
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~G---a~Viv~D 241 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFG---ARVVVTE 241 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC---CEEEEEC
Confidence 358999999999999999998875 7766543
No 300
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=74.43 E-value=11 Score=36.11 Aligned_cols=89 Identities=16% Similarity=0.068 Sum_probs=54.6
Q ss_pred eeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCC-hhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEec
Q 015637 69 LKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGG-VKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (403)
Q Consensus 69 ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~-~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~ 146 (403)
.||.++|.|.+|.. +.+.|.++. .+|. +.|... +.....|- ..| +.+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G---~~V~-~~D~~~~~~~~~~L~---------------~~g---------i~v~~g 56 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG---FEVS-GCDAKMYPPMSTQLE---------------ALG---------IDVYEG 56 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT---CEEE-EEESSCCTTHHHHHH---------------HTT---------CEEEES
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC---CEEE-EEcCCCCcHHHHHHH---------------hCC---------CEEECC
Confidence 48999999999995 888888876 6755 455311 11111111 111 122223
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEc
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIs 189 (403)
.+++++.+ .+.|+||-+.|.-.+.+......++|. -|++
T Consensus 57 ~~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi--~v~~ 95 (326)
T 3eag_A 57 FDAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGL--PYIS 95 (326)
T ss_dssp CCGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTC--CEEE
T ss_pred CCHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCC--cEEe
Confidence 44555431 258999999998777776777777787 3554
No 301
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=74.15 E-value=2.4 Score=41.18 Aligned_cols=31 Identities=26% Similarity=0.268 Sum_probs=25.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+||+|+|+|.+|+.+++.|.... ++|+..+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G---~~V~~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG---VDVTVGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc---CEEEEEEC
Confidence 58999999999999999998764 67665443
No 302
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=74.07 E-value=4.3 Score=39.30 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=24.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~ 103 (403)
+||+|.|.|.+|..+..+|...+ .++ |.+-|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g--~~~-v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKN--LGD-VVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCe-EEEEeC
Confidence 59999999999999999888764 237 445553
No 303
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=74.03 E-value=2.6 Score=41.51 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=25.3
Q ss_pred CceeEEEEccChhHHHHHHHHHcC-CCCCceEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGR-KDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~-~~~~~evvaIn 101 (403)
|+|||+|+|.|.+|..+...|... . .+|..+.
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~G---~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRDG---VEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTT---EEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhCCC---CEEEEEe
Confidence 457999999999999999988663 3 6776664
No 304
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=73.90 E-value=2 Score=40.31 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=25.7
Q ss_pred ccCceeEEEEccChhHHHHHHHHHcC-----CCCCceEEEEe
Q 015637 65 AQAKLKVAINGFGRIGRNFLRCWHGR-----KDSPLEVVAIN 101 (403)
Q Consensus 65 ~~m~ikVaInGfGrIGr~vlr~l~~~-----~~~~~evvaIn 101 (403)
.+|+|||+|.|.|.+|..+...|.+. . ..+|..++
T Consensus 5 ~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g--~~~V~~~~ 44 (317)
T 2qyt_A 5 NQQPIKIAVFGLGGVGGYYGAMLALRAAATDG--LLEVSWIA 44 (317)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHHHHHTTS--SEEEEEEC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHhCccccCC--CCCEEEEE
Confidence 34568999999999999999988764 2 14666565
No 305
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=73.37 E-value=3 Score=39.26 Aligned_cols=33 Identities=24% Similarity=0.228 Sum_probs=27.7
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|.++|-|-| +|.||+.+++.|.++. .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDN 34 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEec
Confidence 567899999 9999999999999875 67777753
No 306
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=73.28 E-value=2.1 Score=39.63 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=27.3
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|.+||.|-| +|.||+.+++.|.++. +..+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 36 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLY-GTENVIASDI 36 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHH-CGGGEEEEES
T ss_pred CCceEEEECCccHHHHHHHHHHHHhC-CCCEEEEEcC
Confidence 557899999 9999999999998761 0167777654
No 307
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=73.18 E-value=2.6 Score=39.77 Aligned_cols=24 Identities=17% Similarity=0.225 Sum_probs=21.5
Q ss_pred ceeEEEEccChhHHHHHHHHHcCC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
++||+|+|.|.+|+.+++.|....
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g 26 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANG 26 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTT
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC
Confidence 468999999999999999998764
No 308
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=72.41 E-value=3.3 Score=35.24 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=27.4
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|++.|+|+|-|..|-..+..|..+. ++|+.+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G---~~V~v~Ek 33 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAG---HQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 7789999999999999999998875 77766654
No 309
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=72.29 E-value=2.7 Score=43.04 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=27.1
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+.||||+|.|.+|+.+.+.|.+.. ++|+..|.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G---~~V~v~~r 46 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRG---YTVSIFNR 46 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTT---CCEEEECS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCC---CeEEEEeC
Confidence 578999999999999999998765 68776664
No 310
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=71.97 E-value=3.3 Score=39.64 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=24.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|+|.|.||...++++.... ..+|+++..
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g--~~~Vi~~~~ 204 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVS--AARVIAVDL 204 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--CCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcC
Confidence 37999999999999999887652 157777753
No 311
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=71.82 E-value=2.8 Score=39.67 Aligned_cols=30 Identities=23% Similarity=0.183 Sum_probs=24.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|||+|+|.|.+|..+.+.|.+.. .+|..++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g---~~V~~~~ 30 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG---NEVRIWG 30 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEE
Confidence 48999999999999999998754 5776665
No 312
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=71.79 E-value=3.9 Score=38.63 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=27.8
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.+||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 57 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDN 57 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 56899999 9999999999999875 68887765
No 313
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=71.79 E-value=2.8 Score=42.88 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=26.0
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+||||+|+|.+|+.+.+.|.+.. ++|...+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G---~~V~v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC---CeEEEEeC
Confidence 58999999999999999998775 67765653
No 314
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=71.72 E-value=4.7 Score=36.96 Aligned_cols=31 Identities=29% Similarity=0.679 Sum_probs=26.7
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..||.|.| +|.||+.+++.|.++. .+|+++.
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 43 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKN---VEVIPTD 43 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSS---EEEEEEC
T ss_pred cceEEEECCCChHHHHHHHHHHhCC---CeEEecc
Confidence 36899999 9999999999998875 7888775
No 315
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=71.72 E-value=4.6 Score=38.77 Aligned_cols=23 Identities=22% Similarity=0.232 Sum_probs=20.2
Q ss_pred eeEEEEccChhHHHHHHHHHcCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
|||+|.|.|.+|..++..|..++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~ 23 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNL 23 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 58999999999999998887654
No 316
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=71.52 E-value=6.2 Score=38.17 Aligned_cols=30 Identities=20% Similarity=0.213 Sum_probs=25.4
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|.|.|.||...++++.... .+|+++.
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~G---a~Vi~~~ 220 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATG---AEVIVTS 220 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEe
Confidence 47999999999999999988765 6887765
No 317
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=70.98 E-value=3.2 Score=39.91 Aligned_cols=30 Identities=13% Similarity=0.139 Sum_probs=24.8
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+||+|+|.|.+|..+...|.+.. .+|..+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g---~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG---EAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEE
Confidence 69999999999999999998764 4665554
No 318
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=70.49 E-value=4.2 Score=38.33 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=25.4
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.||+|+|.|.+|..+...|.... ++|+.++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G---~~V~~~d 45 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG---HTVVLVD 45 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEE
Confidence 48999999999999999998764 7877665
No 319
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=70.41 E-value=2.4 Score=38.26 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=24.7
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
++.+|.|.|+|++|+.+++.|.++. . |++|.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g---~-v~vid 38 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSE---V-FVLAE 38 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSE---E-EEEES
T ss_pred CCCEEEEECCChHHHHHHHHHHhCC---e-EEEEE
Confidence 3568999999999999999997764 6 77675
No 320
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=70.40 E-value=3.1 Score=42.55 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=25.8
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||||+|.|.+|+.+.+.|.+.. ++|...+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G---~~V~v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG---FKVAVFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998775 67765653
No 321
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=70.38 E-value=3.1 Score=39.86 Aligned_cols=30 Identities=20% Similarity=0.186 Sum_probs=24.6
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|.|.|.||...++++.... . +|+++.
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~G---a~~Vi~~~ 196 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRASG---AGPILVSD 196 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999999888764 5 676664
No 322
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=70.37 E-value=3.1 Score=42.85 Aligned_cols=34 Identities=18% Similarity=0.281 Sum_probs=28.3
Q ss_pred cCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 66 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-|..||||+|.|.+|+.+.+.|.+.. ++|+..|.
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G---~~V~v~dr 41 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHG---FTVCAYNR 41 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 47789999999999999999998875 78776664
No 323
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=70.32 E-value=6.8 Score=38.30 Aligned_cols=24 Identities=17% Similarity=0.257 Sum_probs=20.8
Q ss_pred ceeEEEEccChhHHHHHHHHHcCC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
.+||+|.|.|.||..++..|..++
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~ 42 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKD 42 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC
Confidence 469999999999999988887764
No 324
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=70.25 E-value=3.6 Score=41.98 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=25.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.+|+|.|+|.||+.+++.|.... ..|++.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~G---a~Viv~D 250 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMG---SIVYVTE 250 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEEe
Confidence 58999999999999999998875 6766543
No 325
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=70.11 E-value=3.1 Score=42.33 Aligned_cols=93 Identities=23% Similarity=0.253 Sum_probs=52.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCE--EEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGK--VIQVVSN 146 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~--~I~v~~~ 146 (403)
-||-|.|-|+||..+++.|+++ +++.-|.. +.+...+|-. .+ .+.+.++|. ...++.+
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~----~~v~iIE~--d~~r~~~la~------~l--------~~~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQT----YSVKLIER--NLQRAEKLSE------EL--------ENTIVFCGDAADQELLTE 295 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----SEEEEEES--CHHHHHHHHH------HC--------TTSEEEESCTTCHHHHHH
T ss_pred cEEEEEcchHHHHHHHHHhhhc----CceEEEec--CHHHHHHHHH------HC--------CCceEEeccccchhhHhh
Confidence 3899999999999999998653 56666654 3443322211 01 234444442 2222222
Q ss_pred CCCCCCCCCCcCccEEeeCCCCcCCHhh-HHHHHHcCCCeEEE
Q 015637 147 RNPVNLPWGDLGIDLVIEGTGVFVDREG-AGKHIQAGAKKVLI 188 (403)
Q Consensus 147 ~dp~~i~w~~~gvDiV~e~tG~f~s~~~-a~~hl~aGakkVII 188 (403)
. .+ ...|+++-.|+.-..-=. +..+.+.|++|+|.
T Consensus 296 e---~i----~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 296 E---NI----DQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp T---TG----GGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred c---Cc----hhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 2 22 257999999986432211 22333468888665
No 326
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=70.08 E-value=4.6 Score=39.26 Aligned_cols=30 Identities=23% Similarity=0.348 Sum_probs=24.2
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|.|.|.||...++++.... . +|+++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~G---a~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAG---ASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 47999999999999999887654 4 676664
No 327
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=69.69 E-value=3.4 Score=41.41 Aligned_cols=36 Identities=22% Similarity=0.500 Sum_probs=28.2
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHH
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQA 109 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~ 109 (403)
|||+|+|+|.+|..+...|.+.. .+|+.++- +.+.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G---~~V~~~d~--~~~~~ 36 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG---HEVIGVDV--SSTKI 36 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEECS--CHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEEC--CHHHH
Confidence 48999999999999999998875 68776642 44444
No 328
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=69.62 E-value=2.7 Score=41.00 Aligned_cols=30 Identities=27% Similarity=0.107 Sum_probs=24.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|+|.|.||...++++.... . .|+++.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 214 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG---ATTVILST 214 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 47999999999999999988764 5 666554
No 329
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=69.59 E-value=6.5 Score=38.67 Aligned_cols=30 Identities=23% Similarity=0.174 Sum_probs=24.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|+|.|.||...++++.... . .|+++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAG---ASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999999988764 5 777664
No 330
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=69.58 E-value=2.7 Score=40.72 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=25.0
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|.|.|.||...++++.... ..|+++..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~~ 212 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMG---HHVTVISS 212 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 37999999999999999887664 57776654
No 331
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=69.57 E-value=3.4 Score=39.90 Aligned_cols=30 Identities=27% Similarity=0.256 Sum_probs=24.0
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCce-EEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLE-VVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~e-vvaIn 101 (403)
-+|.|+|.|.||...++++.... .. |+++.
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 211 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAG---ACPLVITD 211 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999999988764 44 66554
No 332
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=69.35 E-value=3.7 Score=39.21 Aligned_cols=33 Identities=27% Similarity=0.273 Sum_probs=27.5
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++||.|-| +|.||+.+++.|.+++ ..+|+++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r 57 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETT--DWEVFGMDM 57 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHS--SCEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC--CCEEEEEeC
Confidence 46899999 9999999999998862 178887764
No 333
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=69.21 E-value=3.4 Score=42.61 Aligned_cols=32 Identities=22% Similarity=0.405 Sum_probs=27.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++||||+|+|.+|+.+.+.|.+.. ++|++.|-
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G---~~V~v~dr 35 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 35 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCC---CEEEEEeC
Confidence 368999999999999999998875 78776653
No 334
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=68.98 E-value=3.3 Score=42.28 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=30.2
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhh
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASH 111 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ 111 (403)
|++||+|+|.|.+|..+...|.+.. ..++|++++- +.+.+..
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g-~g~~V~~~D~--~~~~v~~ 49 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKC-PHITVTVVDM--NTAKIAE 49 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHC-TTSEEEEECS--CHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEEC--CHHHHHH
Confidence 4579999999999999999988751 1278877752 4444433
No 335
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=68.67 E-value=4.1 Score=39.06 Aligned_cols=40 Identities=15% Similarity=0.156 Sum_probs=30.2
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhh
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHL 112 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~l 112 (403)
|+ |||++|+|..|..+.+.|.+.. ++|.+-|- +++....|
T Consensus 3 M~-kIgfIGlG~MG~~mA~~L~~~G---~~v~v~dr--~~~~~~~l 42 (300)
T 3obb_A 3 MK-QIAFIGLGHMGAPMATNLLKAG---YLLNVFDL--VQSAVDGL 42 (300)
T ss_dssp CC-EEEEECCSTTHHHHHHHHHHTT---CEEEEECS--SHHHHHHH
T ss_pred cC-EEEEeeehHHHHHHHHHHHhCC---CeEEEEcC--CHHHHHHH
Confidence 54 8999999999999999998875 78776653 34444333
No 336
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=68.43 E-value=5.8 Score=35.06 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=27.0
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+++|.|.| +|.||+.+++.|.+++ ...+|+++..
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~-~g~~V~~~~r 38 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGS-DKFVAKGLVR 38 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-TTCEEEEEES
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcC-CCcEEEEEEc
Confidence 45899999 9999999999999872 1268777653
No 337
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=68.30 E-value=4.7 Score=38.78 Aligned_cols=22 Identities=23% Similarity=0.250 Sum_probs=18.9
Q ss_pred eEEEEccChhHHHHHHHHHcCC
Q 015637 70 KVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 70 kVaInGfGrIGr~vlr~l~~~~ 91 (403)
||+|.|.|.+|..++..+...+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~ 22 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRG 22 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT
T ss_pred CEEEECcCHHHHHHHHHHHhCC
Confidence 7999999999999988777553
No 338
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=68.23 E-value=4.6 Score=37.87 Aligned_cols=30 Identities=20% Similarity=0.180 Sum_probs=25.6
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.||+|+|.|.+|+.+++.+.... ++|+..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G---~~V~l~d 34 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG---FAVTAYD 34 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEe
Confidence 48999999999999999998875 7876554
No 339
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=68.17 E-value=3.2 Score=42.14 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=25.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+||+|+|+|.+|..+...|.+.. ..++|++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g-~G~~V~~~d 37 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC-PEIRVTVVD 37 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 69999999999999999998761 127877775
No 340
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=68.00 E-value=6.3 Score=38.53 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=28.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|+|+|-|.+|+.+++++.+.. ++++++..
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG---~~viv~d~ 43 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMG---YKVVVLDP 43 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 458999999999999999999875 89888864
No 341
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=67.92 E-value=3.3 Score=39.90 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=24.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|.|.|.||...++++.... . +|+++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 198 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLG---AGRIFAVG 198 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT---CSSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CcEEEEEC
Confidence 36999999999999999887664 4 676664
No 342
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=67.85 E-value=9.2 Score=36.13 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=24.5
Q ss_pred eEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 70 kVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+|.|.| .|.||...++++.... .+|+++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~ 182 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG---YTVEASTG 182 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEecCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 699999 5999999999887764 57776654
No 343
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=67.37 E-value=5.2 Score=38.28 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=27.3
Q ss_pred cCceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 66 QAKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 66 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.|+.+|-|-| +|.||+.+++.|.++. .+|+++..
T Consensus 22 ~M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 56 (375)
T 1t2a_A 22 HMRNVALITGITGQDGSYLAEFLLEKG---YEVHGIVR 56 (375)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred hcCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEEC
Confidence 3556899999 9999999999999875 68877754
No 344
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=66.99 E-value=6.6 Score=38.10 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=24.6
Q ss_pred eeEEEEc-cChhHHHHHHHHHc-CCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHG-RKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~-~~~~~~evvaInd 102 (403)
-+|.|+| .|.||...++++.. .. .+|+++..
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g---~~Vi~~~~ 205 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTD---LTVIATAS 205 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCC---SEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcC---CEEEEEeC
Confidence 4799999 99999999998875 33 67777653
No 345
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=66.95 E-value=5.6 Score=36.52 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=25.2
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|.| +|.||+.+++.|. +. .+|+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~r 31 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALDV 31 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT---SEEEEECT
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC---CeEEEecc
Confidence 4799999 9999999999998 64 78887753
No 346
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=66.93 E-value=3.2 Score=37.89 Aligned_cols=23 Identities=17% Similarity=0.433 Sum_probs=20.4
Q ss_pred ceeEEEEccChhHHHHHHHHHcC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGR 90 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~ 90 (403)
++||+|+|.|.+|+.+.+.|...
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~ 26 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA 26 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC
Confidence 36899999999999999998764
No 347
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=66.86 E-value=7.2 Score=32.01 Aligned_cols=33 Identities=30% Similarity=0.344 Sum_probs=28.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+.+|.|.|.|..|+.+++.+...+ .++++++-|
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~--g~~vvg~~d 36 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGK--EFHPIAFID 36 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSS--SEEEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CcEEEEEEE
Confidence 358999999999999999998764 489988865
No 348
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=66.81 E-value=4.6 Score=38.71 Aligned_cols=44 Identities=14% Similarity=0.251 Sum_probs=32.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhcc
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLK 114 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~ 114 (403)
|||.|-| +|.||+.+++.|.+++ .++|+.++-..+.+.+..+++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g--~~~v~~~d~~~d~~~l~~~~~ 45 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT--DHHIFEVHRQTKEEELESALL 45 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEECCTTCCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEECCCCCHHHHHHHhc
Confidence 4899999 9999999999999875 248776543256766655553
No 349
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=66.28 E-value=7 Score=42.41 Aligned_cols=147 Identities=18% Similarity=0.216 Sum_probs=78.2
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhh-------hccccceecccCcceeeecCCeEEECCEEE
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASH-------LLKYDSTLGIFEADVKPVGTDGISVDGKVI 141 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~-------ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I 141 (403)
-||||+|.|.+|..+...+.... ++|+-+ |. +++.+.. .++-....++...... ... .+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG---~~V~l~-D~-~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~--~~~-------~~ 382 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVG---ISVVAV-ES-DPKQLDAAKKIITFTLEKEASRAHQNGQAS--AKP-------KL 382 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEE-CS-SHHHHHHHHHHHHHHHHHHHHHHHTTTCCC--CCC-------CE
T ss_pred cEEEEEcccHHHHHHHHHHHhCC---Cchhcc-cc-hHhhhhhHHHHHHHHHHHHHHhccccchhh--hhh-------hh
Confidence 37999999999999999888765 887644 42 3332222 2211111111111100 011 22
Q ss_pred EEEecCCCCCCCCCCcCccEEeeCCCCcCCHh-----hHHHHHHcCCCeEEEcCCCC-------C--CCC---eEEeecC
Q 015637 142 QVVSNRNPVNLPWGDLGIDLVIEGTGVFVDRE-----GAGKHIQAGAKKVLITAPGK-------G--DIP---TYVVGVN 204 (403)
Q Consensus 142 ~v~~~~dp~~i~w~~~gvDiV~e~tG~f~s~~-----~a~~hl~aGakkVIIsaps~-------~--dvp---~vV~gVN 204 (403)
.. ..+.+.+ .++|+||||.-.-...+ ..+.++..++ ++-||.|. . ..| +..--.|
T Consensus 383 ~~--~~~~~~l----~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~HFfn 454 (742)
T 3zwc_A 383 RF--SSSTKEL----STVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGTHFFS 454 (742)
T ss_dssp EE--ESCGGGG----GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEEECCS
T ss_pred cc--cCcHHHH----hhCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccccccC
Confidence 33 2344443 37999999975443332 2334444556 77788763 1 223 2222344
Q ss_pred ccCCCCCCCeEecCCchhhhHHHHHHHHHhhcCe
Q 015637 205 ADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGI 238 (403)
Q Consensus 205 ~~~~~~~~~IISnaSCTTn~Lap~lk~L~~~fGI 238 (403)
+-.+-+---||..+..+-..+.-+.... +..|-
T Consensus 455 P~~~m~LVEvi~g~~Ts~e~~~~~~~~~-~~lgK 487 (742)
T 3zwc_A 455 PAHVMRLLEVIPSRYSSPTTIATVMSLS-KKIGK 487 (742)
T ss_dssp STTTCCEEEEEECSSCCHHHHHHHHHHH-HHTTC
T ss_pred CCCCCceEEEecCCCCCHHHHHHHHHHH-HHhCC
Confidence 4444332358888877777777666554 44553
No 350
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=66.19 E-value=5.4 Score=37.38 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=26.4
Q ss_pred cCceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 66 QAKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 66 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+|..+|-|-| +|-||+.+++.|.++. .+|+++.
T Consensus 7 ~~~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~~~ 40 (338)
T 2rh8_A 7 IGKKTACVVGGTGFVASLLVKLLLQKG---YAVNTTV 40 (338)
T ss_dssp --CCEEEEECTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEE
Confidence 3567899999 9999999999999875 6777654
No 351
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=66.19 E-value=7.6 Score=37.36 Aligned_cols=30 Identities=30% Similarity=0.277 Sum_probs=24.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|+|.|.||...++++.... . +|+++.
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 203 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMG---AAQVVVTD 203 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999999887664 5 777665
No 352
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=66.07 E-value=3.5 Score=39.57 Aligned_cols=30 Identities=20% Similarity=0.181 Sum_probs=24.6
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|+|.|.||...++++.... . +|+++.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~G---a~~Vi~~~ 199 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASG---AYPVIVSE 199 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999999988764 5 676664
No 353
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=65.83 E-value=14 Score=35.35 Aligned_cols=30 Identities=23% Similarity=0.121 Sum_probs=24.5
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|.|.|.||...++++.... ..|+++.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~ 199 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAYG---AFVVCTA 199 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEc
Confidence 37999999999999999888765 5666664
No 354
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=65.65 E-value=5.2 Score=39.07 Aligned_cols=31 Identities=23% Similarity=0.180 Sum_probs=24.6
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|+|.|.||...++++.... -.+|+++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~ 227 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLG--AENVIVIA 227 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--BSEEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcC--CceEEEEc
Confidence 37999999999999999887664 12777665
No 355
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=65.61 E-value=6 Score=36.94 Aligned_cols=33 Identities=12% Similarity=0.163 Sum_probs=27.1
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+.+||-|-| +|.||+.+++.|.++. .+|+++..
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 46 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVA 46 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeC
Confidence 457899999 9999999999999875 68887764
No 356
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=65.60 E-value=4.3 Score=38.31 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=25.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|+|.|.||...++++.... .+|+++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG---YVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEE
Confidence 47999999999999999887764 5887776
No 357
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=65.50 E-value=35 Score=32.26 Aligned_cols=31 Identities=19% Similarity=0.211 Sum_probs=25.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-|+.|.|.|..||.+++.|.+.. .+|..+|.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G---~~v~V~nR 149 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG---LQVSVLNR 149 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 48999999999999999998764 56666665
No 358
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=65.41 E-value=2.5 Score=38.51 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=26.1
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|+.+|.|.| +|.||+.+++.|.++. .+|+++.
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSD 33 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTE---EEEEECC
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 445899999 8999999999998864 6776554
No 359
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=65.18 E-value=5.8 Score=39.10 Aligned_cols=32 Identities=25% Similarity=0.271 Sum_probs=26.5
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..+|+|.|+|.||+.+++.+.... .+|++++-
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~G---a~V~~~d~ 199 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMG---ATVTVLDI 199 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 358999999999999999998775 67776653
No 360
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=65.17 E-value=3.7 Score=39.23 Aligned_cols=31 Identities=26% Similarity=0.338 Sum_probs=25.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|.|.|.||...++++.... .+|+++..
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~ 198 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMG---LRVAAVDI 198 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 37999999999999999988775 68877753
No 361
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=65.13 E-value=6.1 Score=37.88 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=27.1
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|+.+|.|-| +|.||+.+++.|.+++ .+|+++..
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r 60 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKG---YEVHGLIR 60 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCC---CEEEEEec
Confidence 545899999 9999999999999875 68877754
No 362
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=64.62 E-value=6.1 Score=36.47 Aligned_cols=31 Identities=23% Similarity=0.469 Sum_probs=26.3
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||-|-| +|-||+.+++.|.++. .+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeC
Confidence 4799999 8999999999999875 68877753
No 363
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=64.42 E-value=21 Score=36.06 Aligned_cols=94 Identities=14% Similarity=-0.026 Sum_probs=53.6
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~d 148 (403)
.+|.|+|.|.+|...++.|.+.. -+|+.|..-..++ +..+. +...+.+ +...-+
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g---a~V~vi~~~~~~~-~~~l~----------------~~~~i~~------~~~~~~ 66 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG---ARLTVNALTFIPQ-FTVWA----------------NEGMLTL------VEGPFD 66 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---BEEEEEESSCCHH-HHHHH----------------TTTSCEE------EESSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEcCCCCHH-HHHHH----------------hcCCEEE------EECCCC
Confidence 58999999999999999999875 5666565422222 21221 1111111 111223
Q ss_pred CCCCCCCCcCccEEeeCCCCc-CCHhhHHHHHHcCCCeEEEcCCC
Q 015637 149 PVNLPWGDLGIDLVIEGTGVF-VDREGAGKHIQAGAKKVLITAPG 192 (403)
Q Consensus 149 p~~i~w~~~gvDiV~e~tG~f-~s~~~a~~hl~aGakkVIIsaps 192 (403)
+++++ +.|+||=|||.- ....-+....+.|..-.+++.|.
T Consensus 67 ~~~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 67 ETLLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp GGGGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ccccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcc
Confidence 33332 789999999976 34444445555666322356554
No 364
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=64.28 E-value=8.4 Score=37.09 Aligned_cols=85 Identities=14% Similarity=0.040 Sum_probs=54.7
Q ss_pred eeEEEE-c-cChhHHHHHHHHHcCCCCCceEE-EEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 69 LKVAIN-G-FGRIGRNFLRCWHGRKDSPLEVV-AINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 69 ikVaIn-G-fGrIGr~vlr~l~~~~~~~~evv-aInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
-+++|+ | +|..|+.+++.+.+.. ++++ .||- + ..+.. +.| ++++
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G---~~~v~~VnP----~---------------------~~g~~--i~G--~~vy- 60 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYG---TNLVGGTTP----G---------------------KGGKT--HLG--LPVF- 60 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECT----T---------------------CTTCE--ETT--EEEE-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCC---CcEEEEeCC----C---------------------cCcce--ECC--eeee-
Confidence 358888 9 5999999999888764 6755 3442 1 00111 334 2343
Q ss_pred cCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEE
Q 015637 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 146 ~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVII 188 (403)
.+.++++ .+.++|+++-+++.....+.++..+++|.|.+|+
T Consensus 61 -~sl~el~-~~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 61 -NTVKEAK-EQTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp -SSHHHHH-HHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -chHHHhh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2233332 1126899999998877777788888999988554
No 365
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=64.16 E-value=6.9 Score=39.22 Aligned_cols=39 Identities=15% Similarity=0.088 Sum_probs=28.4
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhh
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHL 112 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~l 112 (403)
-+|.|.| .|.||...++++.... ..++++.. +.+.+.++
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~G---a~vi~~~~--~~~~~~~~ 269 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAGG---ANPICVVS--SPQKAEIC 269 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEES--SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC---CeEEEEEC--CHHHHHHH
Confidence 3799999 5999999999988765 67777653 34444333
No 366
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=64.11 E-value=4 Score=37.25 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=23.5
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|||+|+|.|.+|+.+.+.|.... ..+|..++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g--~~~v~~~~ 31 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQG--GYRIYIAN 31 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--SCEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCC--CCeEEEEC
Confidence 48999999999999999987643 13554444
No 367
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=63.92 E-value=4.3 Score=39.21 Aligned_cols=31 Identities=29% Similarity=0.221 Sum_probs=25.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|.|.|.||...++++.... .+|+++..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~G---a~Vi~~~~ 211 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMG---AETYVISR 211 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 37999999999999999887664 57777763
No 368
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=63.84 E-value=7.7 Score=37.83 Aligned_cols=31 Identities=16% Similarity=0.272 Sum_probs=27.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.+|+|+|.|.+|+.+++++.+.. +++++++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G---~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMG---YKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 48999999999999999999875 89988874
No 369
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=63.05 E-value=5.8 Score=36.68 Aligned_cols=29 Identities=28% Similarity=0.261 Sum_probs=24.2
Q ss_pred eEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 70 kVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
||+|+|+|.+|+.+++.|.+.+ .+|...|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g---~~v~v~~ 146 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG---LEVWVWN 146 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred eEEEECCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 8999999999999999998764 4655454
No 370
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=62.80 E-value=7.3 Score=37.69 Aligned_cols=30 Identities=13% Similarity=0.294 Sum_probs=23.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|.|.|.||...++++.... . +|+++.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 223 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAG---ASRIIGVG 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 37999999999999999887654 4 666664
No 371
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=62.78 E-value=7.9 Score=37.48 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=24.4
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|.|.|.||...++++.... . .|+++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 227 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAG---ASRIIAID 227 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 37999999999999999888764 5 676664
No 372
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=62.73 E-value=8.3 Score=36.34 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=24.9
Q ss_pred eEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 70 kVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+|.|.| .|.||...++++.... .+|+++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G---a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG---YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC---CEEEEEeC
Confidence 499999 6999999999998775 58877763
No 373
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=62.65 E-value=7.4 Score=36.22 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=26.5
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+||.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG---LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 5899999 9999999999999875 68877754
No 374
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=62.60 E-value=4.4 Score=41.91 Aligned_cols=93 Identities=20% Similarity=0.225 Sum_probs=54.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCc---eEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPL---EVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~---evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~ 144 (403)
+.||.|.|+|.||+.+++.+.++++ + +|+.+..- ... ..+.+ - . |.++...
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~d--v~~~~I~vaD~~-~~~--~~~~~--~------------~-------g~~~~~~ 66 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFD--IKPSQVTIIAAE-GTK--VDVAQ--Q------------Y-------GVSFKLQ 66 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBC--CCGGGEEEEESS-CCS--CCHHH--H------------H-------TCEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC--CceeEEEEeccc-hhh--hhHHh--h------------c-------CCceeEE
Confidence 4689999999999999999998753 4 45544321 000 00000 0 0 1011110
Q ss_pred ec-CC-----CCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEEcCC
Q 015637 145 SN-RN-----PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (403)
Q Consensus 145 ~~-~d-----p~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVIIsap 191 (403)
+. .+ .+.+ -++ + |+||.++-.+.+..-++..+++|+ -.|+..
T Consensus 67 ~Vdadnv~~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDTa 114 (480)
T 2ph5_A 67 QITPQNYLEVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYINAA 114 (480)
T ss_dssp CCCTTTHHHHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEESS
T ss_pred eccchhHHHHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEEECC
Confidence 10 01 1111 122 3 999998877778888999999999 566543
No 375
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=62.47 E-value=4.7 Score=38.92 Aligned_cols=31 Identities=13% Similarity=0.107 Sum_probs=24.6
Q ss_pred eeEEEEccChhHHHH-HHHH-HcCCCCCce-EEEEec
Q 015637 69 LKVAINGFGRIGRNF-LRCW-HGRKDSPLE-VVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~v-lr~l-~~~~~~~~e-vvaInd 102 (403)
-+|.|+|.|.||... ++++ .... .. |+++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G---a~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG---YENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC---CCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC---CcEEEEEeC
Confidence 479999999999999 9888 6553 55 777764
No 376
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=62.00 E-value=6.4 Score=37.64 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=25.9
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCc------eEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPL------EVVAIN 101 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~------evvaIn 101 (403)
|++||.|.| .|.||+.+++.|..++ .+ +|+.+.
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g--~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGE--MLGKDQPVILQLLE 42 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTT--TTCTTCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC--CCCCCCCCEEEEEe
Confidence 357999999 7999999999988754 22 777664
No 377
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=61.99 E-value=6.6 Score=37.98 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=23.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|+|.|.||...++++.... . .|+++.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~G---a~~Vi~~~ 222 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCG---ASIIIAVD 222 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT---CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 37999999999999999887654 4 566665
No 378
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=61.93 E-value=4.5 Score=38.52 Aligned_cols=23 Identities=30% Similarity=0.345 Sum_probs=19.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
-+|.|.|.|.||...++++....
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G 184 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALG 184 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCcchHHHHHHHHcC
Confidence 47999999999999999887764
No 379
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=61.66 E-value=7.9 Score=37.28 Aligned_cols=31 Identities=29% Similarity=0.279 Sum_probs=26.7
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 61 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEG---HYVIASDW 61 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CeEEEECCccHHHHHHHHHHHHCC---CeEEEEEC
Confidence 5899999 9999999999999875 68877754
No 380
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=61.38 E-value=7.1 Score=39.66 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=28.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhh
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHL 112 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~l 112 (403)
|||+|.|.|.+|..+..+|.+ . ++|++++- +++.+..+
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G---~~V~~~D~--~~~~v~~l 74 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-N---HEVVALDI--VQAKVDML 74 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-T---SEEEEECS--CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-C---CeEEEEec--CHHHhhHH
Confidence 699999999999999998875 4 78877752 45544333
No 381
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=61.30 E-value=9.7 Score=36.13 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=25.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|.| .|.||...++++.... .+|+++..
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 181 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKG---AHTIAVAS 181 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 4799999 9999999999988765 68777754
No 382
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=61.01 E-value=7.3 Score=36.60 Aligned_cols=34 Identities=18% Similarity=0.429 Sum_probs=28.0
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.+||.|-| +|.||+.+++.|.++. ..++|++++.
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~~v~~~~~ 58 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSY-ETYKIINFDA 58 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHC-TTEEEEEEEC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhC-CCcEEEEEec
Confidence 36899999 9999999999998763 2478887765
No 383
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=60.56 E-value=7.1 Score=38.29 Aligned_cols=31 Identities=23% Similarity=0.204 Sum_probs=25.0
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
++||+|.|.|.+|..+...|.+.. .+|...+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G---~~V~l~~ 59 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG---QKVRLWS 59 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC---CeEEEEe
Confidence 579999999999999999998764 4655444
No 384
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=60.32 E-value=7.3 Score=39.83 Aligned_cols=40 Identities=18% Similarity=0.254 Sum_probs=30.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhh
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHL 112 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~l 112 (403)
.|||+|+|.|.+|..+..+|.+.. .+|+.++- +.+.+..+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G---~~V~~~d~--~~~~v~~l 47 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG---HDVFCLDV--DQAKIDIL 47 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS--CHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCC---CEEEEEEC--CHHHHHHH
Confidence 369999999999999999998865 68777752 44444333
No 385
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=60.26 E-value=12 Score=36.23 Aligned_cols=30 Identities=10% Similarity=-0.029 Sum_probs=24.6
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|+| .|.||...++++.... .+|+++.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G---a~Vi~~~ 196 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG---YIPIATC 196 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC---CEEEEEe
Confidence 4799999 5999999999988765 5777764
No 386
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=59.96 E-value=9.5 Score=36.88 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=24.5
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|.|.|.||...++++.... . .|+++.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 224 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAG---AKRIIAVD 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEc
Confidence 37999999999999999888764 5 676664
No 387
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=59.96 E-value=8.7 Score=36.15 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=27.2
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 35899999 9999999999999875 68877764
No 388
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=59.88 E-value=4.5 Score=39.18 Aligned_cols=31 Identities=35% Similarity=0.350 Sum_probs=25.5
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|.|.|.||+.+++++.... .+|+++..
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~ 212 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYG---LEVWMANR 212 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 47999999999999999887764 57777654
No 389
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=59.83 E-value=8.8 Score=35.81 Aligned_cols=31 Identities=19% Similarity=0.434 Sum_probs=26.5
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG---IDLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC---CEEEEEeC
Confidence 4899999 9999999999999875 68877753
No 390
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=59.82 E-value=6.3 Score=39.21 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=25.9
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaInd 102 (403)
.+|+|+|+|.||+.+++.|...+ + +|+++|-
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G---~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG---VRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC---CSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC---CCEEEEEeC
Confidence 58999999999999999998764 5 7776664
No 391
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=59.59 E-value=7 Score=38.83 Aligned_cols=29 Identities=24% Similarity=0.347 Sum_probs=24.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|||+|+|.|.+|..+...|.+ . .+|++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G---~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q---NEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T---SEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC-C---CEEEEEE
Confidence 489999999999999998876 4 6877775
No 392
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=59.53 E-value=7.7 Score=38.69 Aligned_cols=31 Identities=23% Similarity=0.157 Sum_probs=25.5
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|+|+|+|.||+.+++.+.... .+|++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G---a~V~v~D 202 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLG---AIVRAFD 202 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 358999999999999999998765 6766554
No 393
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=59.39 E-value=9.1 Score=35.70 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=26.2
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|-| +|.||+.+++.|.+++ ..+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRED--HYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST--TCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhC--CCEEEEEeC
Confidence 4799999 9999999999998862 168877764
No 394
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=59.15 E-value=7 Score=37.33 Aligned_cols=30 Identities=33% Similarity=0.450 Sum_probs=24.2
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCc-eEEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAI 100 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaI 100 (403)
++||+|.|.|.+|..++..|.... + +|+.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g---~~~V~l~ 34 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDN---LADVVLF 34 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT---CCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CceEEEE
Confidence 469999999999999999988764 4 75444
No 395
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=58.90 E-value=9.5 Score=32.89 Aligned_cols=29 Identities=24% Similarity=0.437 Sum_probs=24.6
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|||-|.| .|.||+.+++.|. +. .+|+.+.
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~ 33 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KK---AEVITAG 33 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TT---SEEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEe
Confidence 5799999 9999999999998 64 6776664
No 396
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=58.67 E-value=5.5 Score=38.79 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=20.9
Q ss_pred CceeEEEEccChhHHHHHHHHHcC
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGR 90 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~ 90 (403)
|++||+|+|.|.+|..+...|.+.
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc
Confidence 557999999999999999988753
No 397
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=58.54 E-value=9.9 Score=35.90 Aligned_cols=31 Identities=29% Similarity=0.361 Sum_probs=26.6
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLD---QKVVGLDN 59 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 9999999999999875 68877754
No 398
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=58.28 E-value=8.9 Score=39.02 Aligned_cols=31 Identities=32% Similarity=0.427 Sum_probs=27.1
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|-| +|.||+.+++.|.+++ .+|+++..
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R 179 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGG---HEVIQLVR 179 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 6899999 9999999999999875 68877764
No 399
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=58.15 E-value=9.6 Score=35.23 Aligned_cols=31 Identities=29% Similarity=0.544 Sum_probs=25.9
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||-|-| +|.||+.+++.|.++. .+|+++..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG---LEVAVLDN 32 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEEC
Confidence 4799999 9999999999999875 68776643
No 400
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=58.02 E-value=6 Score=37.85 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=25.4
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCC-CCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKD-SPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~-~~~evvaInd 102 (403)
+|||+|+|.|.+|..+.+.|..... +..+|...+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 4689999999999999999986530 0146655543
No 401
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=57.82 E-value=7.1 Score=35.59 Aligned_cols=25 Identities=12% Similarity=0.383 Sum_probs=22.0
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCC
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRK 91 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~ 91 (403)
+++||.|.| +|.||+.+++.|.++.
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 357899999 9999999999998764
No 402
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=57.45 E-value=8 Score=36.20 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=27.1
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|+|||+|.|-| .|+.+++++.++. ++++.+..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~G---~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDEG---FETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHTT---CCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhCC---CEEEEEEC
Confidence 67899999988 9999999998875 78777753
No 403
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=57.41 E-value=8.9 Score=37.76 Aligned_cols=31 Identities=19% Similarity=0.182 Sum_probs=25.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..+|+|+|+|.||+.+++.+.... .+|++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G---a~V~~~d 202 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLG---AVVMATD 202 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 358999999999999999998775 5755554
No 404
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=57.27 E-value=7.2 Score=37.40 Aligned_cols=31 Identities=16% Similarity=0.139 Sum_probs=25.2
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|.| .|.||...++++.... .+|+++..
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~G---a~Vi~~~~ 183 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYG---LRVITTAS 183 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 4799995 9999999999988765 68877753
No 405
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=57.14 E-value=25 Score=35.77 Aligned_cols=83 Identities=16% Similarity=0.159 Sum_probs=49.5
Q ss_pred eeEEEEccChhHHH-HHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEecC
Q 015637 69 LKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (403)
Q Consensus 69 ikVaInGfGrIGr~-vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~~~ 147 (403)
.||.|+|.|.+|.. +++.|.++. .+|. +.|.........|- ..| |+++...
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G---~~V~-~~D~~~~~~~~~l~---------------~~g---------i~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG---YQIS-GSDLAPNSVTQHLT---------------ALG---------AQIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT---CEEE-EECSSCCHHHHHHH---------------HTT---------CEEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC---CeEE-EEECCCCHHHHHHH---------------HCC---------CEEECCC
Confidence 48999999999996 899999886 6754 45532222221211 111 1222223
Q ss_pred CCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCC
Q 015637 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGA 183 (403)
Q Consensus 148 dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGa 183 (403)
+++++. ++|+||=+.|.-.+.+......+.|.
T Consensus 75 ~~~~~~----~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 75 RPENVL----DASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CGGGGT----TCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CHHHcC----CCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 454442 68999998888665555555555554
No 406
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=56.96 E-value=11 Score=35.54 Aligned_cols=31 Identities=35% Similarity=0.474 Sum_probs=26.5
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERG---DKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 9999999999999875 68877754
No 407
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=56.90 E-value=10 Score=35.36 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=26.9
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+++|-|-| +|-||+.+++.|.++. .+|+++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG---YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEec
Confidence 46899999 9999999999999875 68776643
No 408
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=56.72 E-value=8.3 Score=36.15 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=26.3
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|-| +|.||+.+++.|.++. ...+|+++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~-~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNH-PDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhC-CCCEEEEEeC
Confidence 5899999 9999999999998762 1268877754
No 409
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=56.71 E-value=7.6 Score=37.60 Aligned_cols=30 Identities=13% Similarity=0.355 Sum_probs=24.5
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|.|.|.||...++++.... . .|+++.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 223 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAG---AARIIGVD 223 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 37999999999999999888764 5 676664
No 410
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=56.52 E-value=7.6 Score=38.89 Aligned_cols=30 Identities=13% Similarity=0.100 Sum_probs=25.0
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.||+|+|+|+||+.+++.+.... .+|++.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D 214 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLG---AKTTGYD 214 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCC---CEEEEEe
Confidence 58999999999999999998765 5766554
No 411
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=56.45 E-value=9.1 Score=37.53 Aligned_cols=107 Identities=14% Similarity=0.107 Sum_probs=53.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec-CCChhHHhhhcccc-ceecccCcceee----ecCCeEEECCEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYD-STLGIFEADVKP----VGTDGISVDGKVI 141 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd-~~~~~~~a~ll~yD-S~~G~f~~~v~~----~~~~~l~i~G~~I 141 (403)
.-||.|+|.|.+|..++..|....-+.+.| |.+ ..+...+..-+-|. ...|+.+...-. .-+..+ .|
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~l--vD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v-----~v 190 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIIL--IDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEI-----SV 190 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEE--EECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTS-----EE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEE--ECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCC-----eE
Confidence 458999999999999999998654222333 433 34444443332221 122443322110 001112 22
Q ss_pred EEEecC-CCCC-CC-CCCcCccEEeeCCCCcC-CHhhHH-HHHHcCC
Q 015637 142 QVVSNR-NPVN-LP-WGDLGIDLVIEGTGVFV-DREGAG-KHIQAGA 183 (403)
Q Consensus 142 ~v~~~~-dp~~-i~-w~~~gvDiV~e~tG~f~-s~~~a~-~hl~aGa 183 (403)
....++ +..+ ++ | .+.|+||+|+..+. ++.... ...+.|.
T Consensus 191 ~~~~~~i~~~~~~~~~--~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~ 235 (353)
T 3h5n_A 191 SEIALNINDYTDLHKV--PEADIWVVSADHPFNLINWVNKYCVRANQ 235 (353)
T ss_dssp EEEECCCCSGGGGGGS--CCCSEEEECCCCSTTHHHHHHHHHHHTTC
T ss_pred EEeecccCchhhhhHh--ccCCEEEEecCChHHHHHHHHHHHHHhCC
Confidence 222211 1111 11 3 37899999999887 554432 3344444
No 412
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=56.22 E-value=10 Score=36.99 Aligned_cols=30 Identities=27% Similarity=0.324 Sum_probs=25.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.+|+|.|.|.||+.+++.+.... .+|++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G---a~V~~~d 196 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG---AQVTILD 196 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 58999999999999999998875 5777665
No 413
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=55.56 E-value=8.3 Score=36.97 Aligned_cols=30 Identities=30% Similarity=0.520 Sum_probs=24.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc--eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL--EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~--evvaIn 101 (403)
+||+|.|.|.+|..++..|.... + +|+.++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g---~~~~V~l~D 32 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG---FAREMVLID 32 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCCeEEEEe
Confidence 48999999999999999887654 4 666554
No 414
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=55.31 E-value=8.5 Score=35.97 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=25.8
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
..||+|+|.|.+|+.+++.|.+.. .+|...|.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g---~~V~v~~r 160 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEG---AKVFLWNR 160 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CCEEEEECchHHHHHHHHHHHHcC---CEEEEEEC
Confidence 358999999999999999998764 57665553
No 415
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=55.00 E-value=9.7 Score=36.79 Aligned_cols=39 Identities=21% Similarity=0.219 Sum_probs=29.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhh
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHL 112 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~l 112 (403)
.||||+|.|.+|..+...+.... ++|+..+- +++.+..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G---~~V~l~d~--~~~~~~~~ 45 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG---FRVKLYDI--EPRQITGA 45 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEECS--CHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC---CEEEEEeC--CHHHHHHH
Confidence 48999999999999999998775 67765542 45544443
No 416
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=54.95 E-value=14 Score=36.14 Aligned_cols=30 Identities=23% Similarity=0.106 Sum_probs=24.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|+|.|.||...++++.... . .|+++.
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 217 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARLLG---AACVIVGD 217 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEc
Confidence 37999999999999999887654 5 677665
No 417
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=54.85 E-value=9.6 Score=39.19 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=27.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.+|.|.|+|++|+.+++.|.+.. .+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g---~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP---VPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 68999999999999999999875 78877764
No 418
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=54.39 E-value=8.9 Score=36.60 Aligned_cols=30 Identities=33% Similarity=0.420 Sum_probs=24.8
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|.|.|.||+..++++.... .+|+++.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G---a~Vi~~~ 195 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG---LNVVAVD 195 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEe
Confidence 47999999889999999988764 5777665
No 419
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=54.37 E-value=10 Score=36.71 Aligned_cols=33 Identities=30% Similarity=0.303 Sum_probs=25.1
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+++||+|.|.|.+|..+...|.... .++| .+-|
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g--~~~V-~L~D 40 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRE--LADV-VLYD 40 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT--CCEE-EEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CCeE-EEEE
Confidence 3579999999999999999988754 1374 3444
No 420
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=54.34 E-value=15 Score=34.66 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=25.0
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|+| .|.||...++++.... .+|+++.
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~G---a~vi~~~ 184 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQKG---TTVITTA 184 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC---CEEEEEe
Confidence 4799998 9999999999988765 5777764
No 421
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=54.31 E-value=11 Score=35.15 Aligned_cols=33 Identities=33% Similarity=0.650 Sum_probs=26.4
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|-| +|.||+.+++.|.++. ...+|+++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g-~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKH-PDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhC-CCCEEEEEec
Confidence 5899999 9999999999998763 1268877754
No 422
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=54.08 E-value=10 Score=36.59 Aligned_cols=34 Identities=24% Similarity=0.159 Sum_probs=24.9
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+++||+|.| .|.||..++..|.+++. --+|+.+.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~D 41 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYD 41 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEe
Confidence 457999999 99999999999877531 13565553
No 423
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=54.02 E-value=11 Score=38.05 Aligned_cols=31 Identities=19% Similarity=0.130 Sum_probs=25.2
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..||+|+|+|+||+.+++.+.... .+|.+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D 220 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLG---AVVSATD 220 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC---CEEEEEc
Confidence 369999999999999999998775 5665443
No 424
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=53.89 E-value=12 Score=36.48 Aligned_cols=30 Identities=30% Similarity=0.389 Sum_probs=24.4
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCc-eEEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAI 100 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaI 100 (403)
.+||+|.|.|.+|..++..|...+ + +|+-+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~---~~~v~L~ 37 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKE---LGDVVLF 37 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CCeEEEE
Confidence 369999999999999999888765 4 76544
No 425
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=53.83 E-value=18 Score=34.72 Aligned_cols=30 Identities=27% Similarity=0.337 Sum_probs=24.7
Q ss_pred eeEEEEccChhHHHHHHHHHcC-CCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGR-KDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~-~~~~~evvaIn 101 (403)
-+|.|+|.|.||...++++... . .+|+++.
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~~G---a~Vi~~~ 218 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVMTP---ATVIALD 218 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCC---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC---CeEEEEe
Confidence 3799999999999999988765 4 5777775
No 426
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=53.44 E-value=12 Score=34.89 Aligned_cols=30 Identities=20% Similarity=0.340 Sum_probs=25.6
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|||-|-| +|.||+.+++.|.++. .+|+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILD 31 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3799999 9999999999999875 6877764
No 427
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=53.24 E-value=33 Score=34.72 Aligned_cols=82 Identities=21% Similarity=0.233 Sum_probs=53.9
Q ss_pred eeEEEEccC----hhHHHHHHHHHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEEEEEE
Q 015637 69 LKVAINGFG----RIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (403)
Q Consensus 69 ikVaInGfG----rIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~ 144 (403)
-+|+|+|.+ ++|+.+++.|.+.. .-+|..||-- ++. +.|. +++
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g--~~~v~pVnP~-----------~~~------------------i~G~--~~y 55 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVNIK-----------EEE------------------VQGV--KAY 55 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEECSS-----------CSE------------------ETTE--ECB
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcC--CCEEEEECCC-----------CCe------------------ECCE--ecc
Confidence 479999944 89999999997763 2677777731 111 2232 232
Q ss_pred ecCCCCCCCCCCcCccEEeeCCCCcCCHhhHHHHHHcCCCeEEE
Q 015637 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (403)
Q Consensus 145 ~~~dp~~i~w~~~gvDiV~e~tG~f~s~~~a~~hl~aGakkVII 188 (403)
.+..+++ ..+|+++-++......+..+...++|+|.+|+
T Consensus 56 --~sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 56 --KSVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp --SSTTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred --CCHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 3344554 25888888887766666677777888887654
No 428
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=53.17 E-value=18 Score=35.51 Aligned_cols=96 Identities=17% Similarity=0.105 Sum_probs=54.2
Q ss_pred ceeEEEEc-cChhHHHHHHH--HHcCCCCCceEEEEecCCChhHHhhhccccceecccCcceeeecCCeEEECCEE--EE
Q 015637 68 KLKVAING-FGRIGRNFLRC--WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKV--IQ 142 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~--l~~~~~~~~evvaInd~~~~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~--I~ 142 (403)
.+||-|.| +|+.+++++.. +.+|+ +.++|+.-+...- + | +.++.++.+. ++
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~--~~~vVagV~P~~~---------g--~-----------~~~v~~G~~~~Gvp 65 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRD--EPSVAAMVYPFTG---------D--H-----------KQKFYWGHKEILIP 65 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCS--SCSEEEEECTTSC---------S--E-----------EEEEEETTEEEEEE
T ss_pred CCeEEEECCchHHHHHHHHhcccccCC--CceEEEEEcCCCC---------C--c-----------cceEeccCccCCce
Confidence 46899999 89988888876 33454 3788877542000 0 0 0223233332 45
Q ss_pred EEecCCCCCCCCCCc-CccEEeeCCCCcCCHhhHHHHHH-cCCCeEEE-cC
Q 015637 143 VVSNRNPVNLPWGDL-GIDLVIEGTGVFVDREGAGKHIQ-AGAKKVLI-TA 190 (403)
Q Consensus 143 v~~~~dp~~i~w~~~-gvDiV~e~tG~f~s~~~a~~hl~-aGakkVII-sa 190 (403)
++. +.++++ .+. ++|+++.++......+.+...+. +|.+-+|+ |.
T Consensus 66 vy~--sv~ea~-~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~ 113 (334)
T 3mwd_B 66 VFK--NMADAM-RKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAE 113 (334)
T ss_dssp EES--SHHHHH-HHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCS
T ss_pred eeC--CHHHHh-hcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 552 222221 011 57999988876544444455565 78887776 54
No 429
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=53.15 E-value=6.3 Score=37.41 Aligned_cols=31 Identities=6% Similarity=0.040 Sum_probs=25.4
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|.| .|.||+..++++.... .+|+++..
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 173 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALG---AKLIGTVS 173 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 4799999 9999999999988764 57777653
No 430
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=52.70 E-value=13 Score=36.03 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=24.8
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
.+||+|.|.|.||..++..|..++ + +|+-+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~---~~~v~l~D 36 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQ---LGDVVLFD 36 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CceEEEEe
Confidence 369999999999999999888765 4 765443
No 431
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=52.67 E-value=14 Score=34.17 Aligned_cols=32 Identities=13% Similarity=0.105 Sum_probs=26.9
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.++|.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHG---YKVRGTAR 43 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 35899999 8999999999999875 68877654
No 432
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=52.56 E-value=19 Score=34.23 Aligned_cols=30 Identities=10% Similarity=-0.087 Sum_probs=24.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|.| .|.||+.+++++.... .+|+++.
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~ 198 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG---ARVIATA 198 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCC---CEEEEEe
Confidence 4799999 5999999999998765 5777665
No 433
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=52.50 E-value=6.4 Score=38.06 Aligned_cols=30 Identities=13% Similarity=0.279 Sum_probs=24.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
-+|.|.|.|.||...++++.... . .|+++.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~G---a~~Vi~~~ 222 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAG---ASRIIGVD 222 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 37999999999999999887654 4 676664
No 434
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=52.29 E-value=15 Score=36.47 Aligned_cols=30 Identities=23% Similarity=0.102 Sum_probs=24.7
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|.| .|.||...++++.... .+++++.
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~ 252 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG---GIPVAVV 252 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC---CEEEEEe
Confidence 4799999 6999999999988765 6777665
No 435
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=52.12 E-value=11 Score=38.68 Aligned_cols=40 Identities=25% Similarity=0.353 Sum_probs=31.5
Q ss_pred ccCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHH
Q 015637 65 AQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQA 109 (403)
Q Consensus 65 ~~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~ 109 (403)
..++.+|.|.|+|++|+.+++.|.+.. .+++.|.. +++.+
T Consensus 124 ~~~~~hviI~G~g~~g~~la~~L~~~~---~~vvvid~--~~~~~ 163 (565)
T 4gx0_A 124 DDTRGHILIFGIDPITRTLIRKLESRN---HLFVVVTD--NYDQA 163 (565)
T ss_dssp TTCCSCEEEESCCHHHHHHHHHTTTTT---CCEEEEES--CHHHH
T ss_pred cccCCeEEEECCChHHHHHHHHHHHCC---CCEEEEEC--CHHHH
Confidence 455778999999999999999998764 68888874 44433
No 436
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=52.09 E-value=13 Score=34.88 Aligned_cols=32 Identities=25% Similarity=0.670 Sum_probs=26.8
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.++|.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQG---HEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGT---CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 35899999 9999999999999875 68877754
No 437
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=52.00 E-value=14 Score=34.81 Aligned_cols=31 Identities=16% Similarity=0.039 Sum_probs=26.7
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 41 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSL 41 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhCC---CeEEEEeC
Confidence 5899999 9999999999999875 68877754
No 438
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=51.56 E-value=14 Score=35.35 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=26.7
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.++|.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~r 43 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDN 43 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEEe
Confidence 36899999 9999999999999875 68877753
No 439
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=51.52 E-value=15 Score=33.96 Aligned_cols=31 Identities=19% Similarity=0.402 Sum_probs=26.3
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|-|-| +|.||+.+++.|.++. .+|+++..
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 44 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQN---VEVFGTSR 44 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred ceEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 5799999 9999999999999875 68877654
No 440
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=51.48 E-value=8.4 Score=35.05 Aligned_cols=32 Identities=19% Similarity=0.396 Sum_probs=25.6
Q ss_pred eEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 70 kVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+|.|.| +|.||+.+++.|.++. +..+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKV-PASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTS-CGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhC-CCCeEEEEEc
Confidence 689999 9999999999998761 1278877764
No 441
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=50.90 E-value=12 Score=39.85 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=53.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec-CCChhHHhhhcccc-ceecccCcceeeecCCeEEEC-CEEEEEE
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYD-STLGIFEADVKPVGTDGISVD-GKVIQVV 144 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd-~~~~~~~a~ll~yD-S~~G~f~~~v~~~~~~~l~i~-G~~I~v~ 144 (403)
..||.|+|.|.+|-.++..|...+-+.+. -|.. ..+...+..-+-|. ...|+.+..+- . ..-..+| +-.|..+
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~It--lvD~D~Ve~SNLnRQflf~~~dVGk~KAeaa-a-~~L~~iNP~v~V~a~ 92 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHID--LIDLDTIDVSNLNRQFLFQKKHVGRSKAQVA-K-ESVLQFYPKANIVAY 92 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEE--EEECCBCCGGGGGTCTTCCGGGTTSBHHHHH-H-HHHHTTCTTCEEEEE
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEE--EecCCEEChhhcCCCcCCChhHcChHHHHHH-H-HHHHHHCCCCeEEEE
Confidence 46899999999999999999864422233 2432 44555444332222 22365543221 0 0000011 1223333
Q ss_pred ecC-CCCCCC---CCCcCccEEeeCCCCcCCHhhHH
Q 015637 145 SNR-NPVNLP---WGDLGIDLVIEGTGVFVDREGAG 176 (403)
Q Consensus 145 ~~~-dp~~i~---w~~~gvDiV~e~tG~f~s~~~a~ 176 (403)
..+ ...++. | .+.|+||+|+..+.++.+..
T Consensus 93 ~~~i~~~~~~~~~~--~~~DlVvda~Dn~~aR~~ln 126 (640)
T 1y8q_B 93 HDSIMNPDYNVEFF--RQFILVMNALDNRAARNHVN 126 (640)
T ss_dssp ESCTTSTTSCHHHH--TTCSEEEECCSCHHHHHHHH
T ss_pred ecccchhhhhHhhh--cCCCEEEECCCCHHHHHHHH
Confidence 221 112221 2 37899999999876655443
No 442
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=50.88 E-value=32 Score=31.69 Aligned_cols=32 Identities=19% Similarity=0.188 Sum_probs=26.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+.+|.|+|-|..|-..+..|.++. ++|+-|..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g---~~v~vie~ 34 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSG---LSYVILDA 34 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSS---CCEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 468999999999999999998775 67776764
No 443
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=50.80 E-value=14 Score=34.99 Aligned_cols=30 Identities=20% Similarity=0.242 Sum_probs=25.6
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|||+|+|-|..|-.+...|..+. ++|+.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G---~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG---IKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CCEEEEe
Confidence 69999999999999999888775 7877664
No 444
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=50.76 E-value=14 Score=34.05 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=27.7
Q ss_pred CceeEEEEccCh---------hHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGR---------IGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGr---------IGr~vlr~l~~~~~~~~evvaInd 102 (403)
|++||+|.|-|. -|+.+++++.++. ++++.++.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G---~~v~~~~~ 42 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG---IDAYPVDP 42 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT---CEEEEECT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC---CeEEEEec
Confidence 678999999887 7899999998875 78877753
No 445
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=50.74 E-value=16 Score=32.27 Aligned_cols=30 Identities=23% Similarity=0.304 Sum_probs=25.2
Q ss_pred eEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 70 kVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+|-|-| +|-||+.+++.|.++. .+|+++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~r 33 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG---HTVIGIDR 33 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 689999 9999999999999875 67776653
No 446
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=49.90 E-value=15 Score=34.06 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=26.4
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG---YEVYGADR 35 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEEC
Confidence 5799999 9999999999999875 68877754
No 447
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=49.85 E-value=47 Score=33.13 Aligned_cols=84 Identities=21% Similarity=0.180 Sum_probs=50.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCC---hhHHhhhccccceecccCcceeeecCCeEEECCEEEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGG---VKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~---~~~~a~ll~yDS~~G~f~~~v~~~~~~~l~i~G~~I~v~~ 145 (403)
.||.|+|.|..|..+++.|.++. .+|.+ .|... ......| + ..|- ++..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G---~~V~~-~D~~~~~~~~~~~~L--------------~-~~gi---------~~~~ 61 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG---AIVTV-NDGKPFDENPTAQSL--------------L-EEGI---------KVVC 61 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT---CEEEE-EESSCGGGCHHHHHH--------------H-HTTC---------EEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEE-EeCCcccCChHHHHH--------------H-hCCC---------EEEE
Confidence 48999999999999999999886 67654 44311 1111111 1 1121 1222
Q ss_pred cCCCCCCCCCCcC-ccEEeeCCCCcCCHhhHHHHHHcCC
Q 015637 146 NRNPVNLPWGDLG-IDLVIEGTGVFVDREGAGKHIQAGA 183 (403)
Q Consensus 146 ~~dp~~i~w~~~g-vDiV~e~tG~f~s~~~a~~hl~aGa 183 (403)
..+++++ + .+ .|+||=+.|.-.+.+......+.|.
T Consensus 62 g~~~~~~-~--~~~~d~vv~spgi~~~~p~~~~a~~~gi 97 (451)
T 3lk7_A 62 GSHPLEL-L--DEDFCYMIKNPGIPYNNPMVKKALEKQI 97 (451)
T ss_dssp SCCCGGG-G--GSCEEEEEECTTSCTTSHHHHHHHHTTC
T ss_pred CCChHHh-h--cCCCCEEEECCcCCCCChhHHHHHHCCC
Confidence 2334332 1 14 8999999998766666666666776
No 448
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=49.67 E-value=17 Score=34.53 Aligned_cols=32 Identities=25% Similarity=0.435 Sum_probs=27.1
Q ss_pred ceeEEEEc-cChhHHHHHHHHHc--CCCCCceEEEEec
Q 015637 68 KLKVAING-FGRIGRNFLRCWHG--RKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~--~~~~~~evvaInd 102 (403)
.++|-|-| +|-||+.+++.|.+ +. .+|+++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g---~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPK---AKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTT---SEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCC---CeEEEEEC
Confidence 35899999 99999999999998 54 78887764
No 449
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=49.65 E-value=12 Score=36.13 Aligned_cols=30 Identities=23% Similarity=0.301 Sum_probs=24.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|.| .|.||+..++++.... .+|+++.
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G---a~Vi~~~ 215 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD---AHVTAVC 215 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 4799999 8999999999988764 5777665
No 450
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=49.33 E-value=13 Score=35.00 Aligned_cols=32 Identities=31% Similarity=0.415 Sum_probs=25.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|-| +|.||+.+++.|.+++ ..+|+++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~--g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNT--QDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC--SCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcC--CCeEEEEec
Confidence 4799999 9999999999998752 268877754
No 451
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=49.32 E-value=10 Score=36.13 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=20.3
Q ss_pred ceeEEEEccChhHHHHHHHHHcC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGR 90 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~ 90 (403)
++||+|+|.|.+|..+...|...
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc
Confidence 46999999999999999988754
No 452
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=49.15 E-value=16 Score=35.31 Aligned_cols=29 Identities=28% Similarity=0.326 Sum_probs=24.0
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEE
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAI 100 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaI 100 (403)
.||+|.|.|.+|..++..+..++ + +|+-+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g---~~~v~l~ 38 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKE---LADVVLV 38 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCeEEEE
Confidence 58999999999999999888765 5 66544
No 453
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=49.14 E-value=12 Score=35.39 Aligned_cols=32 Identities=22% Similarity=0.292 Sum_probs=24.1
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+||+|.|.|.+|..++..|..... ..+|+.++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~-~~~V~l~d 33 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV-ADDYVFID 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEc
Confidence 589999999999999998876531 12555454
No 454
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=49.10 E-value=12 Score=36.35 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=24.6
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaIn 101 (403)
.+||+|.|.|.||..++..|..++ .+ +|+.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~--~~~~l~l~D 37 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQG--ITDELVVID 37 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--CCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCceEEEEe
Confidence 469999999999999999888764 12 665443
No 455
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=48.04 E-value=18 Score=34.64 Aligned_cols=31 Identities=29% Similarity=0.559 Sum_probs=26.3
Q ss_pred eeEEEEc-cChhHHHHHHHHH-cCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWH-GRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~-~~~~~~~evvaInd 102 (403)
|+|-|-| +|.||+.+++.|. ++. .+|+++..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEec
Confidence 4899999 9999999999998 775 68877754
No 456
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=47.44 E-value=16 Score=36.94 Aligned_cols=30 Identities=27% Similarity=0.485 Sum_probs=25.4
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.||+|+|.|.+|..+...|.... ++|+.++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G---~~V~l~D 67 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVG---ISVVAVE 67 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEE
Confidence 48999999999999999998765 7877664
No 457
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=47.19 E-value=14 Score=35.41 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=20.8
Q ss_pred ceeEEEEccChhHHHHHHHHHcCC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
++||+|.|.|.||..++..|..++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~ 29 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQS 29 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC
Confidence 579999999999999998887653
No 458
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=47.11 E-value=13 Score=35.35 Aligned_cols=23 Identities=13% Similarity=0.128 Sum_probs=20.2
Q ss_pred ceeEEEEccChhHHHHHHHHHcC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGR 90 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~ 90 (403)
..+|+|+|+|.+|+.+++.|...
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~ 157 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQ 157 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CcEEEEECCcHHHHHHHHHHHHh
Confidence 35899999999999999998764
No 459
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=47.01 E-value=21 Score=34.38 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=28.2
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+++||.|.|-|..|+.+++++.+.. ++++++..
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G---~~v~~~~~ 42 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLG---VEVIAVDR 42 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTT---CEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC---CEEEEEEC
Confidence 4579999999999999999998775 78888864
No 460
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=46.99 E-value=22 Score=36.22 Aligned_cols=40 Identities=13% Similarity=0.109 Sum_probs=29.9
Q ss_pred cCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhHHhh
Q 015637 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASH 111 (403)
Q Consensus 66 ~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~~a~ 111 (403)
.| .+|+|+|+|-||--+.-++.+.. ++|+++. .+.+.+..
T Consensus 20 ~m-~~IaViGlGYVGLp~A~~~A~~G---~~V~g~D--id~~kV~~ 59 (444)
T 3vtf_A 20 HM-ASLSVLGLGYVGVVHAVGFALLG---HRVVGYD--VNPSIVER 59 (444)
T ss_dssp CC-CEEEEECCSHHHHHHHHHHHHHT---CEEEEEC--SCHHHHHH
T ss_pred CC-CEEEEEccCHHHHHHHHHHHhCC---CcEEEEE--CCHHHHHH
Confidence 35 48999999999988888887665 7988884 35554433
No 461
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=46.57 E-value=20 Score=35.33 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=28.5
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+++||.|.|-|..|+.+++++.+.. ++++++..
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G---~~v~~v~~ 50 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLG---VEVVAVDR 50 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 4569999999999999999998875 88888875
No 462
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=46.57 E-value=17 Score=34.28 Aligned_cols=32 Identities=16% Similarity=0.456 Sum_probs=25.7
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|-| +|.||+.+++.|.++. ..+|+++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKG--ITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTT--CCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CcEEEEEec
Confidence 6899999 9999999999998864 257777754
No 463
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=46.46 E-value=16 Score=35.50 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=26.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEecCCChhH
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQ 108 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~~~~~~ 108 (403)
-||||+|.|.+|+.++..+.... ++|+ +-|. +++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G---~~V~-l~D~-~~~~ 41 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGG---FRVK-LYDI-EPRQ 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEE-EECS-CHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCC---CeEE-EEEC-CHHH
Confidence 48999999999999999888775 7865 4443 4443
No 464
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=46.33 E-value=11 Score=35.96 Aligned_cols=29 Identities=24% Similarity=0.318 Sum_probs=24.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.+|.|.|+|++|+.+++.|.+++ . ++.|.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g---~-v~vid 144 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSE---V-FVLAE 144 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSC---E-EEEES
T ss_pred CCEEEECCcHHHHHHHHHHHhCC---c-EEEEe
Confidence 47999999999999999998764 6 77675
No 465
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=46.13 E-value=16 Score=36.11 Aligned_cols=37 Identities=19% Similarity=0.289 Sum_probs=27.1
Q ss_pred ccccCceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 63 VAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 63 ~~~~m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
...+|+.+|.|+|-|.+|-.+...|..+. ++|+-|..
T Consensus 17 ~~~~m~~~ViIVGaGpaGl~~A~~La~~G---~~V~viE~ 53 (430)
T 3ihm_A 17 RGSHMKKRIGIVGAGTAGLHLGLFLRQHD---VDVTVYTD 53 (430)
T ss_dssp ------CEEEEECCHHHHHHHHHHHHHTT---CEEEEEES
T ss_pred ccCcCCCCEEEECCcHHHHHHHHHHHHCC---CeEEEEcC
Confidence 34457789999999999999999998875 78777765
No 466
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=46.05 E-value=19 Score=34.05 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=26.1
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|-|-| +|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG---YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEEC
Confidence 4799999 9999999999999875 68777653
No 467
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=45.72 E-value=16 Score=34.37 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=24.3
Q ss_pred eEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 70 kVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+|.|.| .|.||...++++.... .+++++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~ 183 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG---YDVVASTG 183 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT---CCEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 699999 6999999999887664 56776654
No 468
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=45.71 E-value=17 Score=32.61 Aligned_cols=30 Identities=23% Similarity=0.494 Sum_probs=24.2
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|||.|.| +|.||+.+++.|.+ . .+|+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g---~~V~~~~r 31 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-R---HEVIKVYN 31 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-T---SCEEEEES
T ss_pred CEEEEECCCChhHHHHHHHHhc-C---CeEEEecC
Confidence 3799999 99999999999984 3 57766653
No 469
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=45.08 E-value=17 Score=35.88 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=27.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
..||+|.|-|..|+.+++++.+.. ++++++.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG---~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLN---IQVNVLD 54 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 568999999999999999998875 8888887
No 470
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=45.01 E-value=17 Score=35.02 Aligned_cols=24 Identities=21% Similarity=0.329 Sum_probs=20.7
Q ss_pred ceeEEEEccChhHHHHHHHHHcCC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
++||+|.|.|.||..++-.|..++
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~ 28 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQG 28 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHcCC
Confidence 479999999999999988887654
No 471
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=44.52 E-value=17 Score=35.12 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=21.2
Q ss_pred CceeEEEEccChhHHHHHHHHHcCC
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
+++||+|.|.|.||..++-.|..++
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~ 32 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQG 32 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCC
Confidence 4579999999999999988887654
No 472
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=44.44 E-value=19 Score=34.63 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=20.8
Q ss_pred ceeEEEEc-cChhHHHHHHHHHcCC
Q 015637 68 KLKVAING-FGRIGRNFLRCWHGRK 91 (403)
Q Consensus 68 ~ikVaInG-fGrIGr~vlr~l~~~~ 91 (403)
++||+|.| .|.||..++..|..++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~ 29 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGD 29 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC
Confidence 57999999 5999999999888754
No 473
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=44.14 E-value=21 Score=32.83 Aligned_cols=29 Identities=17% Similarity=0.284 Sum_probs=24.7
Q ss_pred eEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 70 kVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
+|.|-| +|.||+.+++.|.++. .+|+++.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 32 (322)
T 2p4h_X 3 RVCVTGGTGFLGSWIIKSLLENG---YSVNTTI 32 (322)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred EEEEECChhHHHHHHHHHHHHCC---CEEEEEE
Confidence 789999 9999999999998875 6877654
No 474
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=43.76 E-value=23 Score=34.11 Aligned_cols=31 Identities=19% Similarity=0.257 Sum_probs=26.7
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.||+|.|-|..||.+++++.+.+ ++++.+..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G---~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG---FYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 38999999999999999998875 78887764
No 475
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=43.25 E-value=19 Score=33.24 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=26.7
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|+.+|.|+|-|.+|-.+...|.++. ++|+.+..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G---~~V~vlE~ 33 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAG---HQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCceEEEECCcHHHHHHHHHHHHCC---CcEEEEEC
Confidence 5568999999999999999998775 67766654
No 476
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=43.13 E-value=24 Score=33.73 Aligned_cols=32 Identities=16% Similarity=0.110 Sum_probs=27.8
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|| ||+|+|-|.-|+.+.+++.+.. +++++++.
T Consensus 1 MK-~I~ilGgg~~g~~~~~~Ak~~G---~~vv~vd~ 32 (363)
T 4ffl_A 1 MK-TICLVGGKLQGFEAAYLSKKAG---MKVVLVDK 32 (363)
T ss_dssp CC-EEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CC-EEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 44 8999999999999999998875 89999964
No 477
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=43.07 E-value=14 Score=35.74 Aligned_cols=22 Identities=32% Similarity=0.471 Sum_probs=19.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcC
Q 015637 69 LKVAING-FGRIGRNFLRCWHGR 90 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~ 90 (403)
|||+|.| .|.||..++..|..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 5899999 999999999988765
No 478
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=42.80 E-value=20 Score=31.46 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=24.8
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.+|-|-| .|-||+.+++.|.++. .+|+.+.
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G---~~V~~~~ 33 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARG---YRVVVLD 33 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC---CEEEEEc
Confidence 4788999 9999999999998875 6776554
No 479
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=42.60 E-value=21 Score=36.20 Aligned_cols=32 Identities=25% Similarity=0.438 Sum_probs=27.4
Q ss_pred ceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
.+||||.|.|.+|..+...|.+.. ++|+.++-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G---~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG---HEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 479999999999999999998875 78877763
No 480
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=41.66 E-value=24 Score=34.24 Aligned_cols=31 Identities=26% Similarity=0.181 Sum_probs=26.0
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|.|.|.+|+.+++.+.... .+|++++-
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G---a~V~v~dr 198 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG---AQVQIFDI 198 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 58999999999999999998875 57766653
No 481
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=41.30 E-value=28 Score=31.27 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=27.4
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
|+.+|.|+|-|..|-..+..|.++. ++|+-|..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g---~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRAR---KNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC---CCEEEEeC
Confidence 6689999999999999999888764 67766764
No 482
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=41.28 E-value=29 Score=32.27 Aligned_cols=33 Identities=24% Similarity=0.469 Sum_probs=25.7
Q ss_pred eeEEEEc-cChhHHHHHHHHHcC-CCCC---ceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGR-KDSP---LEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~-~~~~---~evvaInd 102 (403)
|||.|-| +|.||+.+++.|.++ . +. .+|+++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~-~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAY-PDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSC-TTSCCSEEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhc-CCCCceEEEEEEC
Confidence 4799999 999999999999874 2 12 57777754
No 483
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=41.08 E-value=11 Score=35.89 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=24.5
Q ss_pred eeEEEEcc-ChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInGf-GrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
-+|.|.|. |.||...++++.... .+|+++..
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 177 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILN---FRLIAVTR 177 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeC
Confidence 47999995 599999999887764 57777753
No 484
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=40.93 E-value=19 Score=34.95 Aligned_cols=24 Identities=21% Similarity=0.272 Sum_probs=20.9
Q ss_pred ceeEEEEccChhHHHHHHHHHcCC
Q 015637 68 KLKVAINGFGRIGRNFLRCWHGRK 91 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~~~ 91 (403)
.+||+|.|.|.||..++..|...+
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~ 32 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQG 32 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC
Confidence 368999999999999999888764
No 485
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=40.82 E-value=25 Score=33.78 Aligned_cols=32 Identities=16% Similarity=0.056 Sum_probs=25.0
Q ss_pred ceeEEEEccChhHHHHHHHHHc-CCCCCceEEEEec
Q 015637 68 KLKVAINGFGRIGRNFLRCWHG-RKDSPLEVVAIND 102 (403)
Q Consensus 68 ~ikVaInGfGrIGr~vlr~l~~-~~~~~~evvaInd 102 (403)
..+|+|+|+|.+|+..+++|.+ ++ ++.|.|-+
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~~---~~~V~v~~ 157 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVFD---IGEVKAYD 157 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSC---CCEEEEEC
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhCC---ccEEEEEC
Confidence 3589999999999999999876 33 55555655
No 486
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=40.26 E-value=19 Score=35.05 Aligned_cols=30 Identities=10% Similarity=0.154 Sum_probs=24.2
Q ss_pred eeEEEE--ccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAIN--GFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaIn--GfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
-+|.|. |.|.||...++++.... .+|+++.
T Consensus 172 ~~vlV~gag~G~vG~~a~q~a~~~G---a~Vi~~~ 203 (379)
T 3iup_A 172 HSALVHTAAASNLGQMLNQICLKDG---IKLVNIV 203 (379)
T ss_dssp CSCEEESSTTSHHHHHHHHHHHHHT---CCEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 368998 79999999999887664 5777775
No 487
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=39.98 E-value=26 Score=33.39 Aligned_cols=30 Identities=3% Similarity=0.080 Sum_probs=23.3
Q ss_pred eEEEE-ccChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 70 KVAIN-GFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 70 kVaIn-GfGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
+|-|. |.|.||...++++.... .+|+++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~G---a~Vi~~~~ 197 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEG---FRPIVTVR 197 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 56676 49999999999888764 58877753
No 488
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=39.94 E-value=27 Score=31.81 Aligned_cols=31 Identities=16% Similarity=0.494 Sum_probs=25.1
Q ss_pred eEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 70 kVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
||.|.| +|.||+.+++.|.++. ..+|+++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKG--ITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT--CCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCC--CcEEEEEcc
Confidence 588999 9999999999998864 257777764
No 489
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=39.91 E-value=21 Score=32.50 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=24.0
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.+|-|-| +|-||+.+++.|.++. .+|+.+.
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G---~~V~~~~ 34 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMA---EILRLAD 34 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGE---EEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcC---CEEEEEe
Confidence 3688999 9999999999998764 5665443
No 490
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=39.81 E-value=21 Score=37.22 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=20.1
Q ss_pred eeEEEEccChhHHHHHHHHHcC
Q 015637 69 LKVAINGFGRIGRNFLRCWHGR 90 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~ 90 (403)
.||||+|+|.+|+.+++.|.+.
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHH
T ss_pred CEEEEEeEhHHHHHHHHHHHhc
Confidence 4899999999999999999875
No 491
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=39.72 E-value=21 Score=33.26 Aligned_cols=30 Identities=27% Similarity=0.222 Sum_probs=25.5
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
.+|-|-| +|-||+.+++.|.++. .+|+++.
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~ 36 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERG---YTVRATV 36 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCchHHHHHHHHHHHHCC---CEEEEEE
Confidence 4799999 9999999999999875 6877654
No 492
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=39.18 E-value=22 Score=32.75 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=23.6
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|-|-| +|-||+.+++.|.++. .+|.+..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g----~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN----EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS----CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC----CEEEEEc
Confidence 4899999 9999999999998764 4555543
No 493
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=38.55 E-value=29 Score=32.88 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=25.6
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCc-eEEEEec
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIND 102 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~-evvaInd 102 (403)
.+|.|.|.|.+||.+++.|.+.. . +|+.+|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G---~~~V~v~nR 173 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTA---AERIDMANR 173 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CSEEEEECS
T ss_pred CEEEEECcHHHHHHHHHHHHHCC---CCEEEEEeC
Confidence 58999999999999999998764 5 6665664
No 494
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=38.43 E-value=28 Score=33.01 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=24.3
Q ss_pred eeEEEEccChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 69 ikVaInGfGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|||+|.|.|.+|..++..|...+. ..+|+.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~-g~~V~l~D 32 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQL-ARELVLLD 32 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEe
Confidence 489999999999999998886421 15666554
No 495
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=38.29 E-value=26 Score=32.80 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=26.0
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCC--CCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKD--SPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~--~~~evvaInd 102 (403)
+||.|-| +|.||+.+++.|.+++. ...+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 5899999 99999999999987530 0167777754
No 496
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=38.22 E-value=29 Score=30.55 Aligned_cols=32 Identities=28% Similarity=0.268 Sum_probs=26.1
Q ss_pred CceeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEe
Q 015637 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (403)
Q Consensus 67 m~ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaIn 101 (403)
|..+|-|-| .|.||+.+++.|.++. .+|+.+.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~ 36 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKG---YRVGLMA 36 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 444689999 9999999999999875 6776664
No 497
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=37.57 E-value=30 Score=32.86 Aligned_cols=31 Identities=29% Similarity=0.200 Sum_probs=23.2
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEE
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAI 100 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaI 100 (403)
+||+|.| .|.||..++..|..++. ..+++-+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~ 32 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFV 32 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEE
Confidence 5899999 99999999998876531 1255444
No 498
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=37.36 E-value=30 Score=33.03 Aligned_cols=23 Identities=30% Similarity=0.359 Sum_probs=20.1
Q ss_pred eeEEEEcc-ChhHHHHHHHHHcCC
Q 015637 69 LKVAINGF-GRIGRNFLRCWHGRK 91 (403)
Q Consensus 69 ikVaInGf-GrIGr~vlr~l~~~~ 91 (403)
|||+|.|. |.||..++..|..++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~ 24 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSP 24 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCT
T ss_pred CEEEEECCCChHHHHHHHHHHhCC
Confidence 48999995 999999999988664
No 499
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=37.15 E-value=31 Score=32.88 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=26.1
Q ss_pred eeEEEEc-cChhHHHHHHHHHcCCCCCceEEEEec
Q 015637 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (403)
Q Consensus 69 ikVaInG-fGrIGr~vlr~l~~~~~~~~evvaInd 102 (403)
++|.|-| +|.||+.+++.|.++. ..+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELG--VNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcC--CceEEEEEC
Confidence 5899999 9999999999998863 257777653
No 500
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=37.01 E-value=27 Score=33.80 Aligned_cols=33 Identities=9% Similarity=-0.103 Sum_probs=26.5
Q ss_pred CceeEEEEccChhHHHHHHHHHcCCCCCceEEEEecC
Q 015637 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (403)
Q Consensus 67 m~ikVaInGfGrIGr~vlr~l~~~~~~~~evvaInd~ 103 (403)
|.|+|||+|-| -|+.+++.+.+.. ++++++...
T Consensus 1 ~~~~I~~lGsg-l~~~~~~aAk~lG---~~viv~d~~ 33 (320)
T 2pbz_A 1 MSLIVSTIASH-SSLQILLGAKKEG---FKTRLYVSP 33 (320)
T ss_dssp ---CEEEESST-THHHHHHHHHHTT---CCEEEEECT
T ss_pred CceEEEEEcCH-hHHHHHHHHHHCC---CEEEEEECC
Confidence 66899999999 9999999998886 898888753
Done!