BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015638
(403 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NQZ5|STAR7_HUMAN StAR-related lipid transfer protein 7, mitochondrial OS=Homo
sapiens GN=STARD7 PE=1 SV=2
Length = 370
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 97 ETLEDNFSENDKWENVIDKRNNLLYYNARCCKPKVGP--LKYLSVTVFENCTPEILRDFY 154
E ED+ + +WE V+DK++ L+ +P G +Y + + TP +
Sbjct: 129 EGNEDSEGKEQRWEMVMDKKHFKLWR-----RPITGTHLYQYRVFGTYTDVTPRQFFNVQ 183
Query: 155 MDNDYRVRWDKTVVEHKQLQVDKTNGTEIGRIIKKFPL-LTPREYVLAWRLWEGRDQTFY 213
+D +YR +WD V++ + ++ D +G+E+ + FP + R+YV R ++
Sbjct: 184 LDTEYRKKWDALVIKLEVIERDVVSGSEVLHWVTHFPYPMYSRDYVYVRRYSVDQENNMM 243
Query: 214 CF-SKECDHPLAPPQRKYVRVTYFRS 238
S+ +HP P ++VRV + S
Sbjct: 244 VLVSRAVEHPSVPESPEFVRVRSYES 269
>sp|Q9UKL6|PPCT_HUMAN Phosphatidylcholine transfer protein OS=Homo sapiens GN=PCTP PE=1
SV=1
Length = 214
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 109 WENVIDKRNNLLYYNARCCKPKVGPLKYLSVTVFENCTPEILRDFYMDNDYRVRWDKTVV 168
W+ +++ +Y R K G +Y V E+C+P +L D YMD+DYR +WD+ V
Sbjct: 30 WQLLVETSGISIY---RLLDKKTGLYEYKVFGVLEDCSPTLLADIYMDSDYRKQWDQYV- 85
Query: 169 EHKQLQVDKTNGTEIGRIIKKFPL-LTPREYVLAWRL----WEGRDQTFYCFSKECDHPL 223
K+L + NG + K+P ++ R+YV + EGR + ++ P
Sbjct: 86 --KELYEQECNGETVVYWEVKYPFPMSNRDYVYLRQRRDLDMEGR-KIHVILARSTSMPQ 142
Query: 224 APPQRKYVRVTYFRSGWHIKKVPGRDACEIRIFHQEDAGLNV--GMAKLAFAKGIWSYVC 281
+ +RV ++ I+ G+ ++ +++ ++ G + + A G+ +++
Sbjct: 143 LGERSGVIRVKQYKQSLAIES-DGKKGSKVFMYYFDNPGGQIPSWLINWAAKNGVPNFLK 201
Query: 282 KMDNALRNY 290
M A +NY
Sbjct: 202 DMARACQNY 210
>sp|Q8R1R3|STAR7_MOUSE StAR-related lipid transfer protein 7, mitochondrial OS=Mus
musculus GN=Stard7 PE=2 SV=2
Length = 373
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 100 EDNFSENDKWENVIDKRNNLLYYNARCCKPKVGP--LKYLSVTVFENCTPEILRDFYMDN 157
E + + + WE V+DK++ L+ +P G +Y + + TP + +D
Sbjct: 135 EKSKDKEEPWEMVMDKKHFKLWR-----RPITGTHLYQYRVFGTYTDVTPRQFFNVQLDT 189
Query: 158 DYRVRWDKTVVEHKQLQVDKTNGTEIGRIIKKFPL-LTPREYVLAWRL-WEGRDQTFYCF 215
+YR +WD V++ + ++ D +G+E+ + FP + R+YV R + +
Sbjct: 190 EYRKKWDALVIKLEVIERDAVSGSEVLHWVTHFPYPMYSRDYVYVRRYSVDQENNVMVLV 249
Query: 216 SKECDHPLAPPQRKYVRVTYFRSGWHIK 243
S+ +HP P ++VRV + S I+
Sbjct: 250 SRAVEHPSVPESPEFVRVRSYESQMVIR 277
>sp|P53809|PPCT_RAT Phosphatidylcholine transfer protein OS=Rattus norvegicus GN=Pctp
PE=2 SV=2
Length = 214
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 109 WENVIDKRNNLLYYNARCCKPKVGPLKYLSVTVFENCTPEILRDFYMDNDYRVRWDKTVV 168
W+ +++ +Y R G +Y V E+C P +L D YMD DYR +WD+ V
Sbjct: 30 WQLLVEASGITIY---RLLDQSTGLYEYKVFGVLESCIPSLLADVYMDLDYRKKWDQYV- 85
Query: 169 EHKQLQVDKTNGTEIGRIIKKFPL-LTPREYVLAWRL----WEGRDQTFYCFSKECDHPL 223
K+L +G + K+P L+ R+YV + +GR + + ++ P
Sbjct: 86 --KELYEKSFDGQMVAYWEVKYPFPLSNRDYVYTRQRRDLDVDGR-KIYVVLAQNISVPQ 142
Query: 224 APPQRKYVRVTYFRSGWHIKKVPGRDACEIRIFHQEDAGLNVG--MAKLAFAKGIWSYVC 281
P + +RV ++ I+ G+ + +++ ++ G + + A G+ S++
Sbjct: 143 FPEKSGVIRVKQYKQSLAIES-DGKKGSRVFMYYFDNPGGQIPSWLINWAAKNGVPSFLK 201
Query: 282 KMDNALRNY 290
M A +NY
Sbjct: 202 DMVKACQNY 210
>sp|P53808|PPCT_MOUSE Phosphatidylcholine transfer protein OS=Mus musculus GN=Pctp PE=1
SV=2
Length = 214
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 109 WENVIDKRNNLLYYNARCCKPKVGPLKYLSVTVFENCTPEILRDFYMDNDYRVRWDKTVV 168
W+ +++ +Y R G +Y V E C+P +L D YMD DYR +WD+ V
Sbjct: 30 WQLLVEASGITIY---RLLDQPSGLYEYKVFGVLEGCSPALLTDVYMDLDYRKQWDQYV- 85
Query: 169 EHKQLQVDKTNGTEIGRIIKKFPL-LTPREYVLAWR---LWEGRDQTFYCFSKECDHPLA 224
K+L +++ + K+P L+ R+YV + L R + + ++ P
Sbjct: 86 --KELYEKESDEQMVAYWEVKYPFPLSNRDYVYTRQRRDLDVDRRKIYVVLAQSISAPQF 143
Query: 225 PPQRKYVRVTYFRSGWHIKKVPGRDACEIRIFHQEDAGLNVG--MAKLAFAKGIWSYVCK 282
P + +RV ++ I+ G+ + +++ ++ G + + A G+ +++
Sbjct: 144 PEKSGVIRVKQYKQSLAIES-DGKKGSRVFMYYFDNPGGQIPSWLINWAAKNGVPNFLKD 202
Query: 283 MDNALRNY 290
M A +NY
Sbjct: 203 MVKACQNY 210
>sp|P02720|PPCT_BOVIN Phosphatidylcholine transfer protein OS=Bos taurus GN=PCTP PE=1
SV=1
Length = 213
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 109 WENVIDKRNNLLYYNARCCKPKVGPLKYLSVTVFENCTPEILRDFYMDNDYRVRWDKTVV 168
WE +++ + +Y R + G Y V E+C P++L D YMD YR +WD+ V
Sbjct: 30 WELLVETQGISVY---RLLDQQTGLYAYKVFGVLEDCLPDLLADVYMDLAYRKQWDQYV- 85
Query: 169 EHKQLQVDKTNGTEIGRIIKKFPL-LTPREYVLAWRL----WEGRDQTFYCFSKECDHPL 223
K+L + +G + K+P ++ R+YV + +EG+ + ++ P
Sbjct: 86 --KELYEKECSGETVVYWQVKYPFPMSNRDYVYVRQRQELDFEGQ-KVHVILAQSTSEPQ 142
Query: 224 APPQRKYVRVTYFRSGWHIKKVPGRDACEIRIFHQEDAGLNVG--MAKLAFAKGIWSYVC 281
P + +RV +++ I+ G+ ++ +++ ++ G + + A G+ +++
Sbjct: 143 FPEKSGVIRVKHYKQRLAIQS-DGKRGSKVFMYYFDNPGGQIPSWVINWAAKNGVPNFLK 201
Query: 282 KMDNALRNY 290
M A +NY
Sbjct: 202 DMVKACQNY 210
>sp|Q9Y365|PCTL_HUMAN PCTP-like protein OS=Homo sapiens GN=STARD10 PE=1 SV=2
Length = 291
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Query: 148 EILRDFYMDNDYRVRWDKTVVEHKQLQVDKTNGTEIGRIIKKFPLLTPREYVLAWRLWEG 207
E L D D +YR +WD V+E + N ++G + P V+ R W
Sbjct: 80 ETLYDVLHDIEYRKKWDSNVIETFDIARLTVNA-DVGYYSWRCPKPLKNRDVITLRSWLP 138
Query: 208 RDQTFYCFSKECDHPLAPPQRKYVRVTYFRSGWHIKKVPGRDACEIRIFHQED 260
+ + HP PP++ VR ++G+ I+ G +C I Q D
Sbjct: 139 MGADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLIQST-GPKSCVITYLAQVD 190
>sp|Q9JMD3|PCTL_MOUSE PCTP-like protein OS=Mus musculus GN=Stard10 PE=1 SV=1
Length = 291
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Query: 148 EILRDFYMDNDYRVRWDKTVVEHKQLQVDKTNGTEIGRIIKKFPLLTPREYVLAWRLWEG 207
E L D D +YR +WD V+E + N ++G + P V+ R W
Sbjct: 80 ETLYDVLHDIEYRKKWDSNVIETFDIARLTVNA-DVGYYSWRCPKPLKNRDVITLRSWLP 138
Query: 208 RDQTFYCFSKECDHPLAPPQRKYVRVTYFRSGWHIKKVPGRDACEIRIFHQED 260
+ + HP PP++ VR ++G+ I+ G +C I Q D
Sbjct: 139 MGADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLIQST-GPKSCVITYLAQVD 190
>sp|Q9NSY2|STAR5_HUMAN StAR-related lipid transfer protein 5 OS=Homo sapiens GN=STARD5
PE=1 SV=2
Length = 213
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 5/136 (3%)
Query: 160 RVRWDKTVVEHKQLQ--VDKTNGTEIGRIIKKFPLLTPREYVLAWRLWEGRDQTFYCFSK 217
RV+WD+ V + +Q D + L++PR++V + D T +
Sbjct: 76 RVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNAT 135
Query: 218 ECDHPLAPPQRKYVRVTYFRSGWHIKKVPGRDACE--IRIFHQEDAG-LNVGMAKLAFAK 274
+HPL PP+ +VR G + +PG + FH + +G L + F +
Sbjct: 136 HVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNVVDSFFPR 195
Query: 275 GIWSYVCKMDNALRNY 290
+ + + A++ +
Sbjct: 196 SMTRFYANLQKAVKQF 211
>sp|Q5R8P9|STAR5_PONAB StAR-related lipid transfer protein 5 OS=Pongo abelii GN=STARD5
PE=2 SV=1
Length = 213
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 5/136 (3%)
Query: 160 RVRWDKTVVEHKQLQ--VDKTNGTEIGRIIKKFPLLTPREYVLAWRLWEGRDQTFYCFSK 217
RV+WD+ V + +Q D + L++PR++V + D T +
Sbjct: 76 RVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNAT 135
Query: 218 ECDHPLAPPQRKYVRVTYFRSGWHIKKVPGRDACE--IRIFHQEDAG-LNVGMAKLAFAK 274
+HPL PP+ +VR G + +PG + FH + +G L + F +
Sbjct: 136 HVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNVVDSFFPR 195
Query: 275 GIWSYVCKMDNALRNY 290
+ + + A++ +
Sbjct: 196 SMTRFYANLQKAVKQF 211
>sp|P59096|STAR6_MOUSE StAR-related lipid transfer protein 6 OS=Mus musculus GN=Stard6
PE=2 SV=1
Length = 233
Score = 35.4 bits (80), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 8/158 (5%)
Query: 143 ENCTPEI---LRDFYMDNDYRVRWDKTVVEHKQLQVDKTNGTEIGRIIKKFPL--LTPRE 197
E PE L DF +D+RV WDK++ + ++ I + F + ++PR+
Sbjct: 51 EGIIPESAAHLSDFLFKHDHRVSWDKSLKGFNVIHKIDSDTLICHTITQSFAMGSISPRD 110
Query: 198 YVLAWRLWEGRDQTFYCFSKECDHPLAPPQRKYVRVTYFRSGW---HIKKVPGRDACEIR 254
++ + +K D P P Y+R SG+ +K+ P I
Sbjct: 111 FIDLVHIKHYERNVDIISTKSVDFPGYAPTSTYIRGFNHPSGYVCSPLKENPAYSKLVIF 170
Query: 255 IFHQEDAGLNVGMAKLAFAKGIWSYVCKMDNALRNYAV 292
+ + L + + + + S++ + + ++ Y +
Sbjct: 171 VQTEMKGKLPASVIEKSMPSNLVSFLLNVKDGVKTYRI 208
>sp|Q88434|L_SV5 RNA-directed RNA polymerase L OS=Simian virus 5 (strain W3) GN=L PE=3
SV=1
Length = 2255
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 67 FSAIAVASRSDRSQSRRSEIVS--DADLKFLIETLEDNFSENDKWENVIDKRNNLLYYNA 124
F +A S RR +I D+ + ++LE N K ++D N L YN
Sbjct: 1056 FPRVAHIIIEQTSVGRRKQIQGYLDSTRSIMRKSLEIKPLSNRKLNEILDYNINYLAYNL 1115
Query: 125 RCCKPKVGPLKYLSVTVFENCTPEILRDF 153
K + P YL E C+ +I R+
Sbjct: 1116 ALLKNAIEPPTYLKAMTLETCSIDIARNL 1144
>sp|Q03396|L_SV5WR RNA-directed RNA polymerase L OS=Simian virus 5 (strain 21004-WR)
GN=L PE=3 SV=1
Length = 2255
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 67 FSAIAVASRSDRSQSRRSEIVS--DADLKFLIETLEDNFSENDKWENVIDKRNNLLYYNA 124
F +A S RR +I D+ + ++LE N K ++D N L YN
Sbjct: 1056 FPRVAHIIIEQTSVGRRKQIQGYLDSTRSIMRKSLEIKPLSNRKLNEILDYNINYLAYNL 1115
Query: 125 RCCKPKVGPLKYLSVTVFENCTPEILRDF 153
K + P YL E C+ +I R+
Sbjct: 1116 ALLKNAIEPPTYLKAMTLETCSIDIARNL 1144
>sp|A6UPN9|SPSS_METVS O-phospho-L-seryl-tRNA:Cys-tRNA synthase OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0554 PE=3
SV=1
Length = 381
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 10/150 (6%)
Query: 254 RIFHQEDAGLNVGMAKLAFAKGIWSYVCKMDNALRNYAVVSHPQTIPAVSAVTLVQKVPL 313
+I ED+G N+G+ L G + V + + +P + +V ++P+
Sbjct: 146 KIDELEDSGKNIGLILLTHVDGSYGNVSDVSKVGKIAKSKGYPLLLNCAYSVG---RMPV 202
Query: 314 GLEEINC----ASSSASPAADAVQGLYASEAKLKKLAKRPSKKLVANGLLLLGGVICLSR 369
+++N AS S AA GL + A+ + + SK V L +LG C SR
Sbjct: 203 DGKKLNVDFIAASGHKSMAASGPCGLLSINAEYEDEILKTSKVNVVKELQMLG---CTSR 259
Query: 370 GHSALGAKVAMAYILTKLHKRSGSSGQTRQ 399
G L + +I+ ++ + +TR+
Sbjct: 260 GIPILSLMASFPHIIERVKNWNLELEKTRK 289
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,276,485
Number of Sequences: 539616
Number of extensions: 5928112
Number of successful extensions: 22789
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 22476
Number of HSP's gapped (non-prelim): 219
length of query: 403
length of database: 191,569,459
effective HSP length: 120
effective length of query: 283
effective length of database: 126,815,539
effective search space: 35888797537
effective search space used: 35888797537
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)