BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015639
(403 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 239/418 (57%), Positives = 269/418 (64%), Gaps = 56/418 (13%)
Query: 8 LNRAEEDVMELLWQNGPVVLHNQNQRSLKKSQPS--------FPADQSAPREIPSSHHHQ 59
+ E++ MELLW NG VV+ Q SLKK Q P DQS PR++ +
Sbjct: 29 ITSTEDEFMELLWHNGQVVVQTQ---SLKKPQQQHHKYDDAVIPVDQSNPRDVIRTAQEH 85
Query: 60 QEQQDH---------------LFMQEDEMASWLHYPLNDTNFDSDFCTDLLYP----APC 100
++ LFMQEDEMASWLHYP+NDTNFD DFC DLLYP A C
Sbjct: 86 HNHNNNSNNNNNNNNNTHNSNLFMQEDEMASWLHYPINDTNFDQDFCADLLYPTSAAAAC 145
Query: 101 ITSTTTTTATATATP----PVRATR---VRDSRPQLNTATTVASAPPLRPPIPPPPRR-- 151
+TSTTT T T T T PVR+ +R +P + +AT AS RPPIPP R
Sbjct: 146 VTSTTTNTTTTTTTNNSFAPVRSLHNPEIRSQQPPV-SATATAS----RPPIPPTRRAQV 200
Query: 152 TENFGLFARHMPREVA----SGPSNSKSVTIRESTVVDSSDTP-APGPDSRASEAMRSME 206
+NF F+RH R+ A SGPS K V RESTVVDSS+TP DSR SEA
Sbjct: 201 VQNFAYFSRHRARDGANVAESGPSKVKPVA-RESTVVDSSETPEGIALDSRISEAA---- 255
Query: 207 GASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPA-Q 265
+ + A A SS G ++ T CEMTVTSSPGGSSASAEPP Q
Sbjct: 256 FGRSTSGGDNGGVGGAAAACGASSRGNNNNNNREMTTTCEMTVTSSPGGSSASAEPPQPQ 315
Query: 266 KPAAEDRKRKGRETDDEY-HSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
+P A+DRKRKGRE + EY HSEDVE ESADAKKQ+RGSTS KRSRAAEVHNLSERRRRDR
Sbjct: 316 RPPADDRKRKGREEETEYYHSEDVEFESADAKKQARGSTSTKRSRAAEVHNLSERRRRDR 375
Query: 325 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQY 382
INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGC +VPMMFPG+QQY
Sbjct: 376 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMMFPGIQQY 433
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 227/427 (53%), Positives = 254/427 (59%), Gaps = 75/427 (17%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQP--------SFPADQ-SAPREIPSSHHHQQEQ 62
EE++MELLWQNG VV+H+Q RS KKS P PADQ +EI SSH QQE
Sbjct: 33 EEEIMELLWQNGQVVMHSQ--RSQKKSSPPPSELDDAVLPADQLPGTKEIRSSHDQQQEH 90
Query: 63 QDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRV 122
HLFMQEDEMASWL++PLNDTNFD DFC DLLYP T++ T A T A+ V
Sbjct: 91 H-HLFMQEDEMASWLNHPLNDTNFDHDFCADLLYPPTASTASITREAAVTN---AAASTV 146
Query: 123 RDSRPQLNTATTVA-SAPPLRPPIPPPPRRTENFGLFARHMPREVA-SGPSNSKSVTIRE 180
R + ++ + A SAP P +NF F+RH V+ SG SNSKSV +RE
Sbjct: 147 RGATQRMEARSYPAVSAPRPPIPPVRRAEVVQNFAYFSRHRAGGVSESGRSNSKSV-VRE 205
Query: 181 STVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGAR 240
STVVDS +TP R E A + +N C +GA A T S SS
Sbjct: 206 STVVDSCETPT----------ARISETAFARSADNTCGTINGAAVAGTVSSAP--SSNRE 253
Query: 241 DLTM-CEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSE------------- 286
+T CEMT TSSPG SSASAE PA EDRKRKGRE + E HSE
Sbjct: 254 TMTNPCEMTSTSSPGCSSASAELPALMSPVEDRKRKGREEEAECHSEFIAISITMAHGNQ 313
Query: 287 -------------------------------DVELESADAKKQSRGSTSAKRSRAAEVHN 315
D E ESADAKK+ RGS S+KRSRAAEVHN
Sbjct: 314 PQSVAIRQKTQNSADSSKPLQGRRDAANPLKDAEFESADAKKRIRGSMSSKRSRAAEVHN 373
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMM 375
LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGC +VPMM
Sbjct: 374 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMM 433
Query: 376 FPGVQQY 382
FPG QQY
Sbjct: 434 FPGFQQY 440
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 222/380 (58%), Positives = 256/380 (67%), Gaps = 33/380 (8%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPS-----FPADQSAPREI-PSSHHHQQEQQDH 65
++DVMELLWQNG VV H+QNQRS +KS PS P +Q+A REI PS+ Q E+
Sbjct: 38 DDDVMELLWQNGQVVTHSQNQRSFRKSPPSKFDVSIPQEQAATREIRPST---QLEEHHE 94
Query: 66 LFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDS 125
LFMQEDEMASWL+YPL + D +FC+DLL+PA T P+ A D
Sbjct: 95 LFMQEDEMASWLNYPLVE---DHNFCSDLLFPA--------------ITAPLCANPQPDI 137
Query: 126 RPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVTIRESTVVD 185
RP +AT + P P P + F+R+ V S PSNSK V +RESTVVD
Sbjct: 138 RP---SATATLTLTPRPPIPPCRRPEVQTSVQFSRNK-ATVESEPSNSK-VMVRESTVVD 192
Query: 186 SSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMC 245
S DTP+ GP+SRASE R R G+ +S GG G G +++ C
Sbjct: 193 SCDTPSVGPESRASEMARRKLVEVVNGGGVRYEIARGSDGVRGASVGGDGI-GEKEMMTC 251
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKKQSRGSTS 304
EMTVTSSPGGSSASAEP K A +DRKRKGR DD E SEDVE ESAD KKQ RGSTS
Sbjct: 252 EMTVTSSPGGSSASAEPACPKLAVDDRKRKGRALDDTECQSEDVEYESADPKKQLRGSTS 311
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
KRSRAAEVHNLSERRRRDRINEKM+ALQELIPRCNK+DKASMLDEAIEYLK+LQLQVQM
Sbjct: 312 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQM 371
Query: 365 MSMGCGVVPMMFPGVQQYMP 384
MSMGCG++PMMFPGVQQY+P
Sbjct: 372 MSMGCGMMPMMFPGVQQYLP 391
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 215/394 (54%), Positives = 245/394 (62%), Gaps = 61/394 (15%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPS--------FPADQSAPREIPSSHHHQQEQQ 63
++++MELLWQNG VV+ QNQRS KKSQPS P +QS R S E
Sbjct: 30 DDEIMELLWQNGQVVMQIQNQRSFKKSQPSKFPIQDAVLPPEQSKIR----SSAPVDESS 85
Query: 64 DHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVR 123
LFMQEDEMASWLHYPL+D FC DLL P PC+ ++ PP R
Sbjct: 86 AQLFMQEDEMASWLHYPLDD------FCADLLDPTPCVNASP---------PPARPNLSP 130
Query: 124 DSR-PQLNTATTVASAPPLRPPIPPPPR-----RTENFGLFARHMPREVASGPSNSKSVT 177
D R P+ A T +PPIPP R + NF F R E + PS+S+
Sbjct: 131 DVRQPEERPAAT-------KPPIPPARRVELDSKVHNFLHFPRKSTAE-SGEPSSSRPAG 182
Query: 178 IRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSS 237
+ ESTVVDSSDTP SR S A E N+ GA AATS+ G
Sbjct: 183 M-ESTVVDSSDTPGVCQQSRTSPA----EWCKAELANSGYGTIGGATEAATSAAG----- 232
Query: 238 GARDLTMCEMTVTSSP-----GGSSASAEPPAQKPAAEDRKRKGRETDD--EYHSEDVEL 290
+ T E+T+TSSP GGS+++ P K A+DRKRKGRE DD EY SEDVE
Sbjct: 233 ---EHTTFELTMTSSPEGSGSGGSASAGAEPTPKAPADDRKRKGREGDDTAEYQSEDVEF 289
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
ESADAKKQ RGS +AKRSRAAEVHNLSERRRRDRINEKM+ALQELIPRCNKSDKASMLDE
Sbjct: 290 ESADAKKQVRGSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDE 349
Query: 351 AIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMP 384
AIEYLKSLQLQVQMMSMGC +VPMM+PGVQQYMP
Sbjct: 350 AIEYLKSLQLQVQMMSMGCSMVPMMYPGVQQYMP 383
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 199/384 (51%), Positives = 234/384 (60%), Gaps = 49/384 (12%)
Query: 11 AEEDVMELLWQNGPVVLHNQNQRSLKKSQP------SFPADQSAPREI-PSSHHHQQEQQ 63
A++D+MELLW NG VV+ +QNQRSL+K P + PA S REI P + Q
Sbjct: 39 ADDDIMELLWHNGQVVVQSQNQRSLRKLPPVTNSHDASPAGPSMTREIRPLVENFNQ--- 95
Query: 64 DHLFMQEDEMASWLHYPLNDTN--FDSDFCTDLLYPAPCITSTTTTTATATATPPVRATR 121
HLFM E EMASWLHYP++D D F D LY P + ++ T T + R
Sbjct: 96 -HLFMHEGEMASWLHYPIDDDEPALDQSFGADFLYSPPTTANNSSFMQTLGHTSQLTELR 154
Query: 122 VRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVTIRES 181
+ P+ +RT NF F+RH R A+ PS RES
Sbjct: 155 PMSANPRPPIPPPRRPE-----------QRTPNFAYFSRHNTR--AAEPS--VKAAARES 199
Query: 182 TVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARD 241
TVVDS DT A SR SE +RS +G A +TS+GGG R
Sbjct: 200 TVVDSCDTEAAA--SRVSETVRSAAEG-----------GAGVAAPSTSAGGG------RS 240
Query: 242 LTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKKQSR 300
M ++T+TSSPGGSS+ EP A EDRKRKGRE ++ E SEDV+ ES +AKKQ
Sbjct: 241 TMMYDLTMTSSPGGSSSCDEPVQVAAAEEDRKRKGREAEEWECQSEDVDFES-EAKKQVC 299
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
GSTS KRSRAAEVHNLSERRRRDRINEKM+ALQELIPRCNKSDKASMLDEAI YLKSLQL
Sbjct: 300 GSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQL 359
Query: 361 QVQMMSMGCGVVPMMFPGVQQYMP 384
QVQMMSMGCG+VP+MFPG+QQYMP
Sbjct: 360 QVQMMSMGCGMVPVMFPGIQQYMP 383
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 229/394 (58%), Gaps = 99/394 (25%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPS--------FPADQSAPREIPSSHHHQQEQQ 63
++++MELLWQNG VV+ QNQRS KKSQPS P +QS R S E
Sbjct: 30 DDEIMELLWQNGQVVMQIQNQRSFKKSQPSKFPIQDAVLPPEQSKIR----SSAPVDESS 85
Query: 64 DHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVR 123
LFMQEDEMASWLHYPL+ DFC DLL P PC+ ++ PP R
Sbjct: 86 AQLFMQEDEMASWLHYPLD------DFCADLLDPTPCVNAS---------PPPARPNLSP 130
Query: 124 DSR-PQLNTATTVASAPPLRPPIPPPPR-----RTENFGLFARHMPREVASGPSNSKSVT 177
D R P+ A T +PPIPP R + NF F R E + PS+S+
Sbjct: 131 DVRQPEERPAAT-------KPPIPPARRVELDSKVHNFLHFPRKSTAE-SGEPSSSRPAG 182
Query: 178 IRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSS 237
+ ESTV AATS+ G
Sbjct: 183 M-ESTV------------------------------------------AATSAAG----- 194
Query: 238 GARDLTMCEMTVTSSP-----GGSSASAEPPAQKPAAEDRKRKGRETDD--EYHSEDVEL 290
+ T E+T+TSSP GGS+++ P K A+DRKRKGRE DD EY SEDVE
Sbjct: 195 ---EHTTFELTMTSSPEGSGSGGSASAGAEPTPKAPADDRKRKGREGDDTAEYQSEDVEF 251
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
ESADAKKQ RGS +AKRSRAAEVHNLSERRRRDRINEKM+ALQELIPRCNKSDKASMLDE
Sbjct: 252 ESADAKKQVRGSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDE 311
Query: 351 AIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMP 384
AIEYLKSLQLQVQMMSMGC +VPMM+PGVQQYMP
Sbjct: 312 AIEYLKSLQLQVQMMSMGCSMVPMMYPGVQQYMP 345
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 186/377 (49%), Positives = 225/377 (59%), Gaps = 51/377 (13%)
Query: 16 MELLWQNGPVVLHNQNQRSLKKSQPSFPADQS------APREIPSSHHHQQEQQDHLFMQ 69
MELLWQNG VV+ +QNQR +K P P + + + REI SS HLFMQ
Sbjct: 1 MELLWQNGQVVMQSQNQRPFRK--PPQPPEANGGDGAISAREIRSSEAENYNNSQHLFMQ 58
Query: 70 EDEMASWLHYPLNDTN--FDS-DFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDSR 126
EDEMA+WLHYP+++ FD DF D+ YP P T++ + A + R T +
Sbjct: 59 EDEMAAWLHYPIHEDPPPFDHHDFGADIFYPPPNATASQNRGSAAVQSS-FRTTELWHPA 117
Query: 127 PQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVTIRESTVVDS 186
P+ P R NF F +H + S+SK+ + TVVDS
Sbjct: 118 PRPPIPPPRRPEHA--------PSRIHNFAHFTKH-----GNASSSSKAAAAAQPTVVDS 164
Query: 187 SDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMCE 246
+TP + + R + AG A S GG R+ C+
Sbjct: 165 CETPV-----------------ATAEHAETGRARAAAGKTAVSDGG-------RETATCD 200
Query: 247 MTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKKQSRGSTSA 305
+TVTSSPG SS SAEP ++P A DRKRKGRE ++ E+ SEDV+ ES +AKKQ GSTS
Sbjct: 201 VTVTSSPGDSSGSAEPVEREPMA-DRKRKGREHEESEFQSEDVDFESPEAKKQVHGSTST 259
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSERRRRDRINEKM+ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM
Sbjct: 260 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 319
Query: 366 SMGCGVVPMMFPGVQQY 382
SMG G+VPMMFPG+QQY
Sbjct: 320 SMGYGMVPMMFPGIQQY 336
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 184/377 (48%), Positives = 234/377 (62%), Gaps = 41/377 (10%)
Query: 14 DVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQEDEM 73
+VMELL QNG VV+ + NQ+S KS S A+Q R+ + Q+++ LFMQEDEM
Sbjct: 35 EVMELLCQNGQVVMQSPNQKSRMKSPQSTTAEQITNRD---TRPMSQQEEPQLFMQEDEM 91
Query: 74 ASWLHYPL-NDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDSRPQLNTA 132
SWLHYPL +D+ ++ F +LLYP+ + + A + VR T + RP
Sbjct: 92 ISWLHYPLVDDSTLENSFRDELLYPS----NPQSIEQNAVVSAQVRTTDGMEFRPLTAMT 147
Query: 133 TTVASAPPLRPPIPP-----PPRRTENFGLFARHMPREVASGPSNSKSVTIRESTVV--D 185
TT S RPPIPP P + +FG F+ H R + S PSNSK++ +RESTVV
Sbjct: 148 TTATSTMVARPPIPPMRRTEPETKVNSFGRFSGHA-RRIESAPSNSKNM-VRESTVVGST 205
Query: 186 SSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMC 245
SS+T P++R+SE R+ + + C G AA S+G GG +
Sbjct: 206 SSNTMVLTPETRSSEVQRT-----AITDIPSCGLACSGGVAAPSTGNGG--------ELM 252
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSA 305
+M V+ + EP + + EDRKRKG+ETDD S+ + + KQ RGSTS
Sbjct: 253 KMIVSET--------EPVQRTTSLEDRKRKGKETDD---SDYLCYSTLKGSKQVRGSTST 301
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSERRRRDRINEKM+ALQELIPRCNK+DKASMLDEAIEYLK+LQLQVQMM
Sbjct: 302 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMM 361
Query: 366 SMGCGVVPMMFPGVQQY 382
SMGCG+VPMMFPG QQ+
Sbjct: 362 SMGCGMVPMMFPGAQQF 378
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 183/377 (48%), Positives = 232/377 (61%), Gaps = 45/377 (11%)
Query: 14 DVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQEDEM 73
+VMELL QNG VV+ + NQ+S KS S A+Q R+ + Q+++ LFMQEDEM
Sbjct: 35 EVMELLCQNGQVVMQSPNQKSRMKSPQSTTAEQITNRD---TRPMSQQEEPQLFMQEDEM 91
Query: 74 ASWLHYPL-NDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDSRPQLNTA 132
SWLHYPL +D+ ++ F +LLYP+ + + A + VR T + RP
Sbjct: 92 ISWLHYPLVDDSTLENSFRDELLYPS----NPQSIEQNAVVSAQVRTTDGMEFRPLTAMT 147
Query: 133 TTVASAPPLRPPIPP-----PPRRTENFGLFARHMPREVASGPSNSKSVTIRESTVV--D 185
TT S RPPIPP P + +FG F+ H R + S PSNSK++ +RESTVV
Sbjct: 148 TTATSTMVARPPIPPMRRTEPETKVNSFGRFSGHA-RRIESAPSNSKNM-VRESTVVGST 205
Query: 186 SSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMC 245
SS+T P++R+SE R+ + + C G AA S+G GG +
Sbjct: 206 SSNTMVLTPETRSSEVQRT-----AITDIPSCGLACSGGVAAPSTGNGG--------ELM 252
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSA 305
+M V+ + EP + + EDRKRKG+ETDD + + KQ RGSTS
Sbjct: 253 KMIVSET--------EPVQRTTSLEDRKRKGKETDDSDYL-------CYSTKQVRGSTST 297
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSERRRRDRINEKM+ALQELIPRCNK+DKASMLDEAIEYLK+LQLQVQMM
Sbjct: 298 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMM 357
Query: 366 SMGCGVVPMMFPGVQQY 382
SMGCG+VPMMFPG QQ+
Sbjct: 358 SMGCGMVPMMFPGAQQF 374
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/375 (48%), Positives = 226/375 (60%), Gaps = 51/375 (13%)
Query: 13 EDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAP-REIPSSHHHQQEQQDHLFMQED 71
+++MELLWQNG VV+ NQNQR +K P+ D P REI SS Q HLFMQED
Sbjct: 21 DEIMELLWQNGQVVMQNQNQRPFRKQPPTTDGDGPIPAREIRSSEAENYNSQ-HLFMQED 79
Query: 72 EMASWLHYPLNDT--NFD-SDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDSRPQ 128
EMASWLHYP+++ FD DFC D+LYP P T++ ++ + + VR T ++ P+
Sbjct: 80 EMASWLHYPIHEDPPPFDHHDFCADILYPPPNATASQNQSSASVQS-SVRTTELQHPAPR 138
Query: 129 LNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVTIRESTVVDSSD 188
L R NF FA+H +S + T+ + V+
Sbjct: 139 PPIPPPRRQEHTL--------SRIHNFTHFAKHGNASSSSKAAAPAQPTVATAEHVE--- 187
Query: 189 TPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMCEMT 248
+G + + ++G S G R+ C++T
Sbjct: 188 --------------------------------TGRASVSAAAGKTPASDGGRETATCDVT 215
Query: 249 VTSSPGGSSASAEPPAQKPAAEDRKRKGR-ETDDEYHSEDVELESADAKKQSRGSTSAKR 307
VTSSPGGSS SAEP ++P +RKRKGR + + EY SEDV+ ES +AKKQ RGSTS KR
Sbjct: 216 VTSSPGGSSGSAEPVQREPVV-NRKRKGREQEESEYQSEDVDFESPEAKKQVRGSTSTKR 274
Query: 308 SRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
S AAEVHNLSERRRRDRINEKM+ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM
Sbjct: 275 SHAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 334
Query: 368 GCGVVPMMFPGVQQY 382
GCG+VPM+FPG+QQY
Sbjct: 335 GCGMVPMIFPGIQQY 349
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 182/381 (47%), Positives = 218/381 (57%), Gaps = 77/381 (20%)
Query: 11 AEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPR---EIPSSHHHQQEQQDHLF 67
A++++MELLWQNG VV N R KK P+ Q R P +++Q +LF
Sbjct: 27 ADDEIMELLWQNGQVVTQRPNHRHAKKP----PSCQETTRGGGASPVENYNQ-----YLF 77
Query: 68 MQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDSRP 127
MQE+EMASWLHY +D+ FD F TD L P + ++ T T+ V SRP
Sbjct: 78 MQENEMASWLHY--DDSPFDRTFSTDYLNTPPATANNNSSIQTPTS--------VVPSRP 127
Query: 128 QLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVTIRESTVVDSS 187
+ + P P FA+H G N+ +RESTVVDS
Sbjct: 128 PIPPPRRMGHVQPETPN-------------FAKH-------GVMNT---AVRESTVVDSC 164
Query: 188 DTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMCEM 247
DTPA P + SE ++S+ T G A S
Sbjct: 165 DTPAVMP-AAFSETVKSL-----------ADQTEGDTEVAVVS----------------- 195
Query: 248 TVTSSPGGSSASAEP-PAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKKQSRGSTSA 305
T PGGSS+S EP P K A +DRKRKG E ++ EY SEDV+ ESA+AKK GS S
Sbjct: 196 TTFDEPGGSSSSEEPEPVGKVAEQDRKRKGIEAEEWEYQSEDVDFESAEAKKNISGS-ST 254
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSERRRRDRINEKM+ALQELIPR NKSDKASMLDEAI+YLKSLQLQVQMM
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQMM 314
Query: 366 SMGCGVVPMMFPGVQQYMPNM 386
SMGCG+VPMMFPG+QQYMP +
Sbjct: 315 SMGCGMVPMMFPGIQQYMPTV 335
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 182/387 (47%), Positives = 218/387 (56%), Gaps = 83/387 (21%)
Query: 11 AEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPR---EIPSSHHHQQEQQDHLF 67
A++++MELLWQNG VV N R KK P+ Q R P +++Q +LF
Sbjct: 27 ADDEIMELLWQNGQVVTQRPNHRHAKKP----PSCQETTRGGGASPVENYNQ-----YLF 77
Query: 68 MQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDSRP 127
MQE+EMASWLHY +D+ FD F TD L P + ++ T T+ V SRP
Sbjct: 78 MQENEMASWLHY--DDSPFDRTFSTDYLNTPPATANNNSSIQTPTS--------VVPSRP 127
Query: 128 QLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVTIRESTVVDSS 187
+ + P P FA+H G N+ +RESTVVDS
Sbjct: 128 PIPPPRRMGHVQPETPN-------------FAKH-------GVMNT---AVRESTVVDSC 164
Query: 188 DTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMCEM 247
DTPA P + SE ++S+ T G A S
Sbjct: 165 DTPAVMP-AAFSETVKSL-----------ADQTEGDTEVAVVS----------------- 195
Query: 248 TVTSSPGGSSASAEP-PAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKKQSRGSTSA 305
T PGGSS+S EP P K A +DRKRKG E ++ EY SEDV+ ESA+AKK GS S
Sbjct: 196 TTFDEPGGSSSSEEPEPVGKVAEQDRKRKGIEAEEWEYQSEDVDFESAEAKKNISGS-ST 254
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV--- 362
KRSRAAEVHNLSERRRRDRINEKM+ALQELIPR NKSDKASMLDEAI+YLKSLQLQV
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQRV 314
Query: 363 ---QMMSMGCGVVPMMFPGVQQYMPNM 386
QMMSMGCG+VPMMFPG+QQYMP +
Sbjct: 315 QLMQMMSMGCGMVPMMFPGIQQYMPTV 341
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 186/391 (47%), Positives = 235/391 (60%), Gaps = 69/391 (17%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQD-HLFMQE 70
++D+MELLWQNG VV+ QNQR L +PS S P+ +PS QQ D +LF+QE
Sbjct: 36 DDDLMELLWQNGQVVV--QNQR-LHTKKPS----SSPPKLLPSMDPQQQPSSDQNLFIQE 88
Query: 71 DEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATAT-PPVRATRVRDSRPQL 129
DEM SWLHYPL D DFC+DLL+ A + T T + TA PPV
Sbjct: 89 DEMTSWLHYPLRD----DDFCSDLLFSAAPTATATATVSQVTAARPPV------------ 132
Query: 130 NTATTVASAPPLRPPIPPPPRRTENFGLFAR-----HMPREVASGPSNSKSVTIRESTVV 184
++T S PP+R NF F+R + R SGP SK+V +REST V
Sbjct: 133 --SSTNESRPPVR-----------NFMNFSRLRGDFNNGRGGESGPLLSKAV-VRESTQV 178
Query: 185 DSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGG---GGSSGARD 241
+P+ P + ASE SG+ R T G ++A + GG G + A
Sbjct: 179 ----SPSATPSAAASE--------SGL-----TRRTDGTDSSAVAGGGAYNRKGKAVAMT 221
Query: 242 LTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRG 301
E+T TSS S + EP +K +DRKRK RE +++ E S + K+
Sbjct: 222 APAIEITGTSSSVVSKSEIEP--EKTNVDDRKRKEREATT---TDETESRSEETKQARVS 276
Query: 302 STSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQ 361
+TS KRSRAAEVHNLSER+RRDRINE+M+ALQELIPRCNKSDKASMLDEAIEY+KSLQLQ
Sbjct: 277 TTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
Query: 362 VQMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
+QMMSMGCG++PMM+PG+QQYMP+M MG+GM
Sbjct: 337 IQMMSMGCGMMPMMYPGMQQYMPHMAMGMGM 367
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 187/391 (47%), Positives = 235/391 (60%), Gaps = 69/391 (17%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQD-HLFMQE 70
++D+MELLWQNG VV+ QNQR L +PS S P+ +PS QQ D +LF+QE
Sbjct: 36 DDDLMELLWQNGQVVV--QNQR-LHTKKPS----SSPPKLLPSMDPQQQPSSDQNLFIQE 88
Query: 71 DEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATAT-PPVRATRVRDSRPQL 129
DEM SWLHYPL D DFC+DLL+ A + T T + TA PPV
Sbjct: 89 DEMTSWLHYPLRD----DDFCSDLLFSAAPTATATATVSQVTAARPPV------------ 132
Query: 130 NTATTVASAPPLRPPIPPPPRRTENFGLFAR-----HMPREVASGPSNSKSVTIRESTVV 184
++T S PP+R NF F+R + R SGP SK+V +REST V
Sbjct: 133 --SSTNESRPPVR-----------NFMNFSRLRGDFNNGRGGESGPLLSKAV-VRESTQV 178
Query: 185 DSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGG---GGSSGARD 241
S TP+ + ASE SG+ R T G ++A + GG G + A
Sbjct: 179 SPSATPS----AAASE--------SGL-----TRRTDGTDSSAVAGGGAYNRKGKAVAMT 221
Query: 242 LTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRG 301
E+T TSS S + EP +K +DRKRK RE +++ E S + K+
Sbjct: 222 APAIEITGTSSSVVSKSEIEP--EKTNVDDRKRKEREATT---TDETESRSEETKQARVS 276
Query: 302 STSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQ 361
+TS KRSRAAEVHNLSER+RRDRINE+M+ALQELIPRCNKSDKASMLDEAIEY+KSLQLQ
Sbjct: 277 TTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
Query: 362 VQMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
+QMMSMGCG++PMM+PG+QQYMP+M MG+GM
Sbjct: 337 IQMMSMGCGMMPMMYPGMQQYMPHMAMGMGM 367
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 180/405 (44%), Positives = 230/405 (56%), Gaps = 69/405 (17%)
Query: 2 RISIFLLNRAEEDVMELLWQNGPVVLHNQ---NQRSLKKSQPSFPADQSAPREIPSSHHH 58
R SI + ++D+MELLWQNG VV+ NQ N + K S SFP P PS +H
Sbjct: 29 RKSITTMGEDDDDLMELLWQNGQVVVQNQRLHNNNTKKPSSSSFPTKLLQPPIPPSMDNH 88
Query: 59 QQEQ----QDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPA----PCITSTTTTTAT 110
QQ+Q +LF+QEDEM SWLHYPL D DFC+DLL+ A PC TS T
Sbjct: 89 QQQQQPSSDQNLFIQEDEMTSWLHYPLRD----DDFCSDLLFSAAPTPPCATSHVVTAVR 144
Query: 111 ATATPPVRATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGP 170
PPV +++ S PP+R NF F+R + + ++G
Sbjct: 145 ----PPVPVP-----------SSSNESRPPVR-----------NFMNFSR-LRGDFSNGR 177
Query: 171 SNSKSVTI-RESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATS 229
S TI REST V S ++ + SG+ R T G ++A
Sbjct: 178 GESGPKTIVRESTQV-----------SPSATPSSAAASESGL-----TRRTDGTDSSA-- 219
Query: 230 SGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVE 289
G + A E+T TSS S + EP +K +D+KRK RE + +
Sbjct: 220 GLNRKGKAVAMTAPAIEITGTSSSVVSKSEIEP--EKTNFDDKKRKEREA-----TTEEA 272
Query: 290 LESADAKKQSRGST-SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASML 348
++ KQ+RGST S KRSRAAEVHNLSER+RRDRINE+M+ALQELIPRCNKSDKASML
Sbjct: 273 ECRSEETKQARGSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASML 332
Query: 349 DEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGMG 393
DEAIEY+KSLQLQ+Q+MSMGCG++PMM+PG+QQYMP+M M +GM
Sbjct: 333 DEAIEYMKSLQLQIQVMSMGCGMMPMMYPGMQQYMPHMAMRMGMN 377
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 209/353 (59%), Gaps = 68/353 (19%)
Query: 49 PREIPSSHHHQQEQQDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTT 108
P++ PSS + LF+QEDEM SWLHYPL D DFC+DLL+ A + T T
Sbjct: 3 PQQQPSSDQN-------LFIQEDEMTSWLHYPLRD----DDFCSDLLFSAAPTATATATV 51
Query: 109 ATATAT-PPVRATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFAR-----HM 162
+ TA PPV ++T S PP+R NF F+R +
Sbjct: 52 SQVTAARPPV--------------SSTNESRPPVR-----------NFMNFSRLRGDFNN 86
Query: 163 PREVASGPSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSG 222
R SGP SK+V +REST V S TP+ + ASE SG+ R T G
Sbjct: 87 GRGGESGPLLSKAV-VRESTQVSPSATPS----AAASE--------SGL-----TRRTDG 128
Query: 223 AGAAATSSGGG---GGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRET 279
++A + GG G + A E+T TSS S + EP +K +DRKRK RE
Sbjct: 129 TDSSAVAGGGAYNRKGKAVAMTAPAIEITGTSSSVVSKSEIEP--EKTNVDDRKRKEREA 186
Query: 280 DDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
+++ E S + K+ +TS KRSRAAEVHNLSER+RRDRINE+M+ALQELIPRC
Sbjct: 187 TT---TDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRC 243
Query: 340 NKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
NKSDKASMLDEAIEY+KSLQLQ+QMMSMGCG++PMM+PG+QQYMP+M MG+GM
Sbjct: 244 NKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMAMGMGM 296
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 209/353 (59%), Gaps = 68/353 (19%)
Query: 49 PREIPSSHHHQQEQQDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTT 108
P++ PSS + LF+QEDEM SWLHYPL D DFC+DLL+ A + T T
Sbjct: 3 PQQQPSSDQN-------LFIQEDEMTSWLHYPLRD----GDFCSDLLFSAAPTATATATV 51
Query: 109 ATATAT-PPVRATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFAR-----HM 162
+ TA PPV ++T S PP+R NF F+R +
Sbjct: 52 SQVTAARPPV--------------SSTNESRPPVR-----------NFMNFSRLRGDFNN 86
Query: 163 PREVASGPSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSG 222
R SGP SK+V +REST V S TP+ + ASE SG+ R T G
Sbjct: 87 GRGGESGPLLSKAV-VRESTQVSPSATPS----AAASE--------SGL-----TRRTDG 128
Query: 223 AGAAATSSGGG---GGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRET 279
++A + GG G + A E+T TSS S + EP +K +DRKRK RE
Sbjct: 129 TDSSAVAGGGAYNRKGKAVAMTAPAIEITGTSSSVVSKSEIEP--EKTNVDDRKRKEREA 186
Query: 280 DDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
+++ E S + K+ +TS KRSRAAEVHNLSER+RRDRINE+M+ALQELIPRC
Sbjct: 187 TT---TDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRC 243
Query: 340 NKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
NKSDKASMLDEAIEY+KSLQLQ+QMMSMGCG++PMM+PG+QQYMP+M MG+GM
Sbjct: 244 NKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMAMGMGM 296
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 167/411 (40%), Positives = 207/411 (50%), Gaps = 50/411 (12%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDH------ 65
E +++ELLW+NG VVLH+Q QR AP E H Q +
Sbjct: 27 EHELVELLWRNGQVVLHSQTQRK----------SGLAPNESKQVQKHDQTMLRNGGSCGN 76
Query: 66 --LFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVR 123
+Q++E SW+ YPL+D+ D +FC++L P PVR +
Sbjct: 77 WSNLIQDEESISWIQYPLDDS-LDKEFCSNLFMELP-------PNDPVQPEKPVRHSEQE 128
Query: 124 DSRPQLNTATTVASAPPLRP--PIPPPP-------RRTENFGLFARHMPREVASGPSNSK 174
S P P P P+PPP ++ + G F + + S P S
Sbjct: 129 KSVPSSQQPIFKHLGSPEFPGNPMPPPKFQVPGSVQQNCSSGGFGKIVNFPNFSFPGRSN 188
Query: 175 SVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASG----VNNNNRCR-NTSGAGAAATS 229
+ + S A G D++ M G VN + R ++SG G S
Sbjct: 189 LGSSKAQLGGKGSGNMAQGGDAKEGSVMTVGLSHCGSNQVVNEADLSRFSSSGVGTGCLS 248
Query: 230 SGGGGG------SSGARDLT-MCEMTVTSSPGGSSASAEPPAQKPAAE--DRKRKGRETD 280
SG S G R T E TVTSS GG S S+ K + + KRKGRE +
Sbjct: 249 SGHVKENVMRIVSQGDRRQTETLEPTVTSSSGGGSGSSFGRTYKQSTDTNSHKRKGREAE 308
Query: 281 D-EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
+ E SE E ESA K S+ S S +RSRAAEVHNLSERRRRDRINEKM+ALQELIP
Sbjct: 309 ESECQSEAAEHESAARNKASQRSGSTRRSRAAEVHNLSERRRRDRINEKMKALQELIPHS 368
Query: 340 NKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
NKSDKASMLDEAIEYLKSLQLQ+Q+M MG GV PMMFPGVQ YM MGMG+
Sbjct: 369 NKSDKASMLDEAIEYLKSLQLQLQLMWMGGGVAPMMFPGVQHYMARMGMGM 419
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 167/411 (40%), Positives = 207/411 (50%), Gaps = 50/411 (12%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDH------ 65
E +++ELLW+NG VVLH+Q QR AP E H Q +
Sbjct: 27 EHELVELLWRNGQVVLHSQTQRK----------SGLAPNESKQVQKHDQTMLRNGGSCGN 76
Query: 66 --LFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVR 123
+Q++E SW+ YPL+D+ D +FC++L P PVR +
Sbjct: 77 WSNLIQDEESISWIQYPLDDS-LDKEFCSNLFMELP-------PNDPVQPEKPVRHSEQE 128
Query: 124 DSRPQLNTATTVASAPPLRP--PIPPPP-------RRTENFGLFARHMPREVASGPSNSK 174
S P P P P+PPP ++ + G F + + S P S
Sbjct: 129 KSVPSSQQPIFKHLGSPEFPGNPMPPPKFQVPGSVQQNCSSGGFGKIVNFPNFSFPGRSN 188
Query: 175 SVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASG----VNNNNRCR-NTSGAGAAATS 229
+ + S A G D++ M G VN + R ++SG G S
Sbjct: 189 LGSSKAQLGGKGSGNMAQGGDAKEGSVMTVGLSHCGSNQVVNEADLSRFSSSGVGTGCLS 248
Query: 230 SGGGGG------SSGARDLT-MCEMTVTSSPGGSSASAEPPAQKPAAE--DRKRKGRETD 280
SG S G R T E TVTSS GG S S+ K + + KRKGRE +
Sbjct: 249 SGHVKENVMRIVSQGDRRQTETLEPTVTSSSGGGSGSSFGRTYKQSTDTNSHKRKGREAE 308
Query: 281 D-EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
+ E SE E ESA K S+ S S +RSRAAEVHNLSERRRRDRINEKM+ALQELIP
Sbjct: 309 ESECQSEAAEHESAARNKASQRSGSTRRSRAAEVHNLSERRRRDRINEKMKALQELIPHS 368
Query: 340 NKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
NKSDKASMLDEAIEYLKSLQLQ+Q+M MG GV PMMFPGVQ YM MGMG+
Sbjct: 369 NKSDKASMLDEAIEYLKSLQLQLQLMWMGGGVAPMMFPGVQHYMARMGMGM 419
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 144/401 (35%), Positives = 202/401 (50%), Gaps = 44/401 (10%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKS-QPSFPADQSAPREIPSSHHHQQEQQDHLFMQE 70
E D +EL+W+ G +++ Q+ R+ K SFP+ PR+ + H + + Q+
Sbjct: 29 ENDFVELVWEGGQIMMQGQSSRARKSPLSNSFPSHTPKPRDKDTGHGTNSKMGN----QD 84
Query: 71 DEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATR---VRDSRP 127
D+M WL+YP+ D + D+C+D L +T +T A+ R + ++DS
Sbjct: 85 DDMVPWLNYPI-DESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNT 143
Query: 128 ----------QLNTA-TTVASAPPLRP---PIPPPPRRTENFGLFARHMPREVASGPSNS 173
Q N + + A P RP + PP + + F+ ++ G + +
Sbjct: 144 ISAHNGVSLEQGNASKASAAGVEPSRPRSSQLYPPSSQQSSTSGFSSTKTQKQDPGQTRN 203
Query: 174 KSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGG 233
S + S PA + + EGA C+N + +
Sbjct: 204 NSGLMNFSHF----SRPAALVKANLQNIVICQEGA--------CKNEKSSNQVLGARTAK 251
Query: 234 GGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVELES 292
G G + + E V S S S E + P + KRK R+T++ E SEDVE ES
Sbjct: 252 GIPDGEKTI---EPAVACSSVCSGNSVERASNDPK-HNLKRKCRDTEESECPSEDVEEES 307
Query: 293 ADAKKQS--RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
+K + +G T +KRSRAAEVHNLSERRRRDRINEKMRALQELIP CNK DKASMLDE
Sbjct: 308 VGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDE 367
Query: 351 AIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYMPNMGMG 389
AIEYLK+LQLQVQ+MSMG G+ PMM P Q++ MG
Sbjct: 368 AIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMG 408
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 216/439 (49%), Gaps = 81/439 (18%)
Query: 12 EEDVMELLWQNGPVVLHNQNQR-------SLKKSQPSFPADQSAPREI-PSSHHHQQEQQ 63
+++++ELLW+NG VV+HNQ R +L++ Q S DQS R P + +Q+
Sbjct: 26 DQELVELLWKNGQVVMHNQTHRKTLGNSSNLRQVQKS---DQSVLRSSGPYGNSSNLDQE 82
Query: 64 DHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVR 123
D A W+ +PL D + DFC++LL P T + P+R
Sbjct: 83 D--------AAPWVQFPLEDP-LEQDFCSNLLSELP--------TCEFESYKPIRQLEEE 125
Query: 124 DSRPQLNTAT----TVASAPPLRP-------------PIP-PPPR--------RTENFGL 157
+ T T +S+ PL P PIP P PR + +FG
Sbjct: 126 KFAKFFASGTPHHPTTSSSQPLPPNMKPSCIQGLQGNPIPMPAPRFHGPDSSQKIHDFGA 185
Query: 158 FARHMPREVASGPSNS-----KSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVN 212
+ + S P N+ RE T + S + A + S G++ +
Sbjct: 186 SRKVLNFPQFSTPRNNVPSAPGITQFREKTTANMSQSEAR--EYSVITVGSSHCGSNHIP 243
Query: 213 NNNRCRNTSGAGAAATSSGGGGGSS---GARDLT--------------MCEMTVTSSPGG 255
S G AT++ S+ RD M E+TVTSS GG
Sbjct: 244 QEQDVSRISSTGVWATTNNNTTLSAEPEAVRDYVQRPICPKSGQGKSEMIELTVTSSSGG 303
Query: 256 SSASAEPPAQKPAAED--RKRKG-RETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAE 312
S ++ + D +KRKG E E SED EL+SAD K S+ + S++R+RAAE
Sbjct: 304 SGSTGIGRTCSLSTRDHGQKRKGTEEEALEEQSEDTELKSADGNKASQRTRSSRRNRAAE 363
Query: 313 VHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
VHN SERRRRDRINEKMR LQ+LIP NK+DKASML+EAIEYLKSLQ Q+Q+M MG G+
Sbjct: 364 VHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVMWMGGGMT 423
Query: 373 PMMFPGVQQYMPNMGMGIG 391
P+MFPG+Q YM MGMG+G
Sbjct: 424 PVMFPGIQHYMSQMGMGMG 442
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 164/420 (39%), Positives = 221/420 (52%), Gaps = 51/420 (12%)
Query: 13 EDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQEDE 72
+D++ELLW+NG VVL Q+Q++ K S + Q + P + +Q+DE
Sbjct: 26 DDLVELLWRNGQVVL--QSQKARKSSLIANEVRQFQKQNQPLYRSNVSCGNSSNLIQDDE 83
Query: 73 MASWLHYPLNDTNFDSDFCTDL---LYPAPCI------------TSTTTTTATATATPPV 117
SW+ PL+D+ F+ +FC++ L PA I T A TAT
Sbjct: 84 TVSWIQDPLDDS-FEKEFCSNFFSELPPADPIEIVKQPIKHFQDDKQTRFGAFDTATHVT 142
Query: 118 RATRVR-DSRPQLNTATT-VASAPPLRPPIPPPPRRTENFGLFARHM--------PREVA 167
V+ +S+P + A + + PP R R+ ++ G + + P +
Sbjct: 143 FGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVNFSQVPVPPLKGD 202
Query: 168 SGPSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCR----NTSGA 223
G SN RES + + G D S G++ V N N +TSG
Sbjct: 203 LGSSNGG----RESGNLIQGE----GRDCSGMTVGSSHCGSNQVPNPNDLDLSRVSTSGF 254
Query: 224 GAAATSSGGGGG------SSGARDLT-MCEMTVTSSPGGSSASAE---PPAQKPAAEDRK 273
G A S+G + G RD T + T TSS GGS +S + Q K
Sbjct: 255 GNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGGNGNK 314
Query: 274 RKGRETDD-EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 332
RKGR+ ++ E SE ELESA+ K + S S++R+RAAEVHNLSERRRR+RINEKM+AL
Sbjct: 315 RKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEKMKAL 374
Query: 333 QELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
QELIP CNK+DKASMLDEAIEYLKSLQLQ+Q+M MG G+ PMMFPGVQ YM + MG+GM
Sbjct: 375 QELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSGMAPMMFPGVQHYMSRVAMGMGM 434
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 197/408 (48%), Gaps = 64/408 (15%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQED 71
++D+MELLW NG VV+ +Q R L P P AP + QED
Sbjct: 21 DDDLMELLWCNGNVVMQSQGHRKL----PPRPEKVPAPAVV----------------QED 60
Query: 72 EMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDSRPQLNT 131
E W + L D+ D D TDL P + A D R ++
Sbjct: 61 EAGLWFPFALADS-LDKDIFTDLFCEEPPGAAVVDGAGKAGRGDGAPLLGDVDGRSSQSS 119
Query: 132 ATTVASAPPLRPPIPPPPRRTE-NFGLFARHMPREVASGPSNSKSVTIRESTVVDSSDTP 190
A + AS + PPP+ T + +R +A N+ V S +V +
Sbjct: 120 AVSAASD------LMPPPKSTHTHVSCSSRQQSMSLADCGDNAGGVV---SGLVQARAGK 170
Query: 191 AP---GPDSRASEAMRSMEGAS------GVNNNNRCRNTS-----GAGAAATSSGGGGGS 236
A G S S S G++ V+ R +T+ GAG+A S+ G G +
Sbjct: 171 AAMEEGASSTLSAIGASFCGSNQVQVQGAVSEQGRAGHTTVYGGRGAGSALPSAVGSGNA 230
Query: 237 SGARDLTMCEMTVTSSPGGSS-------------ASAEPPAQKPAAEDRKRKGRETDDEY 283
+ + E TV SS G S+ EP + + RKR D E
Sbjct: 231 NASG--RGHEATVASSSGRSNYCFGAAATTTTTTTGTEPTSTSNRSSKRKRGLDTEDSES 288
Query: 284 HSEDVELES-ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS 342
SED E ES A +K + T+A+RSRAAEVHNLSERRRRDRINEKMRALQELIP CNK+
Sbjct: 289 PSEDAESESLALDRKPPQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT 348
Query: 343 DKASMLDEAIEYLKSLQLQVQMMSMGCGVV---PMMFPGVQQYMPNMG 387
DKASMLDEAIEYLK+LQ+QVQMM MG G+ +MFPG+ QY+P MG
Sbjct: 349 DKASMLDEAIEYLKTLQMQVQMMWMGGGMAAPPAVMFPGMHQYLPQMG 396
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 209/429 (48%), Gaps = 61/429 (14%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRS-LKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQE 70
+++++ELLWQNG VV HNQ R L S A ++ + SS + + +
Sbjct: 26 DQELVELLWQNGQVVRHNQTHRKPLGNSSNLRQAQKTDHSTLRSSGPYGNSSN----LDQ 81
Query: 71 DEMASWLHYPLNDTNFDSDFCTDLL--YPAPC----------ITSTTTTTATATATPPVR 118
+E W+ +PL D + DFC++LL P C + T A++TP
Sbjct: 82 EEATPWIQFPLEDP-LEQDFCSNLLSELPPTCEFESYKPIKQLEEDKFTNFFASSTPHHP 140
Query: 119 ATRVRDSRPQLNTATTVASAPPLRPPIPPP----------------PRRTENFGLFARHM 162
T P T++ V P+P P R+ NF F+
Sbjct: 141 TTSSSKPLPPNMTSSWVQRIQGNPNPMPAPRFHVPDSSQKDNDLGASRKVLNFPHFS--T 198
Query: 163 PRE-VASGPSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTS 221
PR V+S P S RE T + S + A + S G+S + S
Sbjct: 199 PRNNVSSAPG---STQFREKTTANLSQSEAR--EYSVITVGSSHCGSSHIPQEKDVSRVS 253
Query: 222 GAGAAATSSGGGGGSS--GARDLT--------------MCEMTVTSSPGGSSASAEPPAQ 265
+ AT++ + RD M E TVTSS GGS ++
Sbjct: 254 SSAVWATNNNNSLSAEPEAVRDCVQRPICPRSDKGKSEMIEPTVTSSSGGSGSTGIGRTC 313
Query: 266 KPAAED--RKRKG-RETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRR 322
+ D +KRKG E E SE EL+SAD K S+ + S+KR+RAAEVHN SERRRR
Sbjct: 314 SLSTRDHGQKRKGTEEEASEEQSEATELKSADGNKASQRTGSSKRNRAAEVHNQSERRRR 373
Query: 323 DRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQY 382
DRINEKMR LQ+LIP NK+DKASML+EAIEYLKSLQ Q+Q+M MG G+ P+MFPG+Q Y
Sbjct: 374 DRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVMWMGSGMTPVMFPGIQHY 433
Query: 383 MPNMGMGIG 391
M MGMG+G
Sbjct: 434 MSQMGMGMG 442
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 198/405 (48%), Gaps = 97/405 (23%)
Query: 2 RISIFLLNRAEEDVMELLWQNGPVVLHNQNQRSLKKSQP------SFPADQSAPREIPSS 55
R+ I+ R E+D++ELLWQ+G VV NQ R P S +++AP P
Sbjct: 9 RVWIWFEIRREDDIVELLWQSGQVVGTNQTHRQSYDPPPILRGSGSGRGEENAPLSQPPP 68
Query: 56 HHHQQEQQDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATP 115
H HQQ +LF+QE EM SWLH+ N+ FC++LL P ++ +
Sbjct: 69 HLHQQ----NLFIQEGEMYSWLHHSYRQ-NY---FCSELLNSTPATHPQSSIS------- 113
Query: 116 PVRATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMP------REVASG 169
L T+A+ RR ENF F+ R +G
Sbjct: 114 -------------LAPRQTIAT------------RRAENFMNFSWLRGNIFTGGRVDEAG 148
Query: 170 PSNSKSVTIRESTVVDSSDTPAPGPDSRASEA--MRSMEG-ASGVNNNNRCRNTSGAGAA 226
PS S +RES V S+ TP P S A+E+ + + EG AS V+ + G A
Sbjct: 149 PSFS---VVRESMQVGSNTTP---PSSSATESCVIPATEGTASRVSGTLAAHDLGRKGKA 202
Query: 227 ATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSE 286
G SSG +C+ A EP +PA E K K RE E H
Sbjct: 203 VAVEAAGTPSSG-----VCK-----------AETEPVQIQPATES-KLKARE---ETH-- 240
Query: 287 DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS 346
+++RGSTS KRSR AE+HNL+ERRRR++INEKM+ LQ+LIPRCNKS K S
Sbjct: 241 --------GTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVS 292
Query: 347 MLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPG-VQQYMPNMGMGI 390
LD+AIEY+KSLQ Q+Q M + PMM G QQ+MP+M M +
Sbjct: 293 TLDDAIEYVKSLQSQIQGM-----MSPMMNAGNTQQFMPHMAMDM 332
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 188/399 (47%), Gaps = 92/399 (23%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQED 71
++D+MELLW NG VV+ +Q R L P P +A + MQED
Sbjct: 11 DDDLMELLWCNGHVVMQSQTHRKL----PPRPEKAAAAAAV---------------MQED 51
Query: 72 EMASWLHYPLNDTNFDSDFCTDLLYPA---------PCI---TSTTTTTATATATPPVRA 119
E W + D+ D D +DL A C + ++ A + PP ++
Sbjct: 52 EAGLWFPFSHADS-LDKDIFSDLFCEAVPQAVGIKPDCYGDGNGSKSSDAPSELMPPPKS 110
Query: 120 T-----RVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPS--- 171
T + D +T A+A M +E AS S
Sbjct: 111 TMADGGELSDLVQARSTGKAAAAA-----------------------MEQEGASASSFCG 147
Query: 172 NSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSG 231
+S V ++ + V S+ T A G +R A+ SG+N N R R + A ++ S+G
Sbjct: 148 SSNQVQVQHAGRVQSAGTAAYGSSARLQSAV-----GSGINANGRGREATVASSSGRSNG 202
Query: 232 GGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD--EYHSEDVE 289
++ +SS RKR T+D E SED E
Sbjct: 203 CFTNTTTTSTEPTSASLRSSS------------------KRKRLDSRTEDYSESPSEDAE 244
Query: 290 LESADA--KKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
ES +K +A+RSRAAEVHNLSERRRRDRINEKM+ALQELIP CNK+DKASM
Sbjct: 245 SESLALIERKPPLKLPTARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASM 304
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVVP--MMFPGVQQYMP 384
LDEAIEYLK+LQ+QVQMM MG G+ P +MFPG+ QY+P
Sbjct: 305 LDEAIEYLKTLQMQVQMMWMGSGMAPPAVMFPGMHQYLP 343
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 104/141 (73%), Gaps = 11/141 (7%)
Query: 248 TVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKKQS--RGSTS 304
+V S G S EP ++ KRK ++TDD E HSEDVE ESA AKK + RG
Sbjct: 377 SVCSGNGTDQGSEEP------NQNLKRKRKDTDDSECHSEDVEEESAGAKKTAGGRGGAG 430
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
+KRSRAAEVHNLSER+RRDRINEKMRALQELIP CNK DKASMLDEAIEYLK+LQLQVQ+
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 490
Query: 365 MSMGCGVV--PMMFPGVQQYM 383
MSMG G+ PMM P Q+M
Sbjct: 491 MSMGAGLYMPPMMLPAGMQHM 511
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 108/159 (67%), Gaps = 7/159 (4%)
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAE-DRKRKGRETDDEYHSEDVELESADAKKQ---SRG 301
E V S GS S + P++ P+ RK + D HSEDVE ES D +K+ SR
Sbjct: 274 EKAVVCSSVGSGNSLDGPSESPSLSLKRKHSDIQDIDCRHSEDVEEESGDGRKEAGPSRT 333
Query: 302 STSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQ 361
+KRSR+AEVHNLSERRRRDRINEKMRALQELIP CNK DKASMLDEAIEYLKSLQLQ
Sbjct: 334 GLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQ 393
Query: 362 VQMMSMGCGVV--PMMF-PGVQQYMPNMGMGIGMGMGMG 397
VQ+MSM G P+MF PG+ Y M MG+GM MG
Sbjct: 394 VQIMSMASGYYMPPVMFPPGMGHYPAAMAMGMGMPYAMG 432
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/120 (68%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
Query: 272 RKRKGRETDD-EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
KRKGR DD + SEDVE E+ + K SR S +RSRAAEVHN SERRRRDRINEKMR
Sbjct: 168 HKRKGRGKDDSDSRSEDVECEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMR 227
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
+LQELIP CNK+DKAS+LDEAIEYLKSLQ+QVQ+M M G+ PMMFPG Q+MP M +G+
Sbjct: 228 SLQELIPHCNKADKASILDEAIEYLKSLQMQVQVMWMTSGMAPMMFPGSHQFMPPMAVGM 287
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/120 (68%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
Query: 272 RKRKGRETDD-EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
KRKGR DD + SEDVE E+ + K SR S +RSRAAEVHN SERRRRDRINEKMR
Sbjct: 159 HKRKGRGKDDSDSRSEDVECEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMR 218
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
+LQELIP CNK+DKAS+LDEAIEYLKSLQ+QVQ+M M G+ PMMFPG Q+MP M +G+
Sbjct: 219 SLQELIPHCNKADKASILDEAIEYLKSLQMQVQVMWMTSGMAPMMFPGSHQFMPPMAVGM 278
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/104 (75%), Positives = 90/104 (86%)
Query: 280 DDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
+ E SED EL+SA A K ++ S S +RSRAAEVHNLSERRRRDRINEKMRALQELIP C
Sbjct: 5 ESECQSEDAELDSAVANKPAKRSGSTRRSRAAEVHNLSERRRRDRINEKMRALQELIPHC 64
Query: 340 NKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYM 383
NK+DKASMLDEAIEYLKSLQLQ+Q+M MG G+VP+MFPGVQ +M
Sbjct: 65 NKTDKASMLDEAIEYLKSLQLQLQVMWMGSGIVPVMFPGVQHFM 108
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 98/121 (80%), Gaps = 3/121 (2%)
Query: 272 RKRKGRETDD-EYHSE--DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEK 328
+KRK +T+D EY SE +++L+S ++ S S +RSRAAEVHNLSERRRRDRINEK
Sbjct: 146 QKRKTIDTEDSEYQSEAAELDLDSMAGNNPTKRSGSTRRSRAAEVHNLSERRRRDRINEK 205
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGM 388
MRALQELIP C K+DKASMLDEAIEYLKSLQLQ+Q+M MG G+ PM+FPGVQ +M MGM
Sbjct: 206 MRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVMWMGGGMAPMLFPGVQHFMSRMGM 265
Query: 389 G 389
G
Sbjct: 266 G 266
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 100/125 (80%), Gaps = 6/125 (4%)
Query: 273 KRKGRETDD-EYHSEDVELESAD--AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
KRK +T+D E SED E ESA A+K + T+A+RSRAAEVHNLSERRRRDRINEKM
Sbjct: 289 KRKRLDTEDSESPSEDAESESAAMLARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKM 348
Query: 330 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV---PMMFPGVQQYMPNM 386
RALQELIP CNK+DKASMLDEAIEYLKSLQLQVQMM MG G+ +MFPGV QY+ M
Sbjct: 349 RALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSGIAAPPAVMFPGVHQYLSRM 408
Query: 387 GMGIG 391
G+G+G
Sbjct: 409 GVGMG 413
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 97/124 (78%), Gaps = 2/124 (1%)
Query: 272 RKRKGRETDD-EYHSEDVELESA-DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
+KRKGR DD + SED E E A + K SR + +R+RAAEVHNLSERRRRDRINEKM
Sbjct: 285 QKRKGRCRDDSDSPSEDAECEEASEETKPSRRYGTKRRTRAAEVHNLSERRRRDRINEKM 344
Query: 330 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMG 389
RALQELIP CNK+DKAS+LDE IEYLKSLQ+QVQ+M M G+ PMMFPGV Q++P M +G
Sbjct: 345 RALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSGMAPMMFPGVHQFIPQMALG 404
Query: 390 IGMG 393
+ G
Sbjct: 405 MNPG 408
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 196/400 (49%), Gaps = 64/400 (16%)
Query: 1 MRISIFLLNRAEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPRE---IPSSHH 57
+ ++ R E+DV+ELLW++ VV +Q QRS+ P F S E +P
Sbjct: 880 LEFGFWIEIRGEDDVVELLWKSSQVVQCSQTQRSIPP--PIFRGSGSRSGEETALPPPPL 937
Query: 58 HQQEQQDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPV 117
H +Q LF+QEDE+ASWL++PL S +TST T + +
Sbjct: 938 HPSQQI--LFIQEDEIASWLYHPLLQDYLSSG-----------VTSTPATHRQGSVS-LA 983
Query: 118 RATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVT 177
+ Q+ A RRT+NF F R + G + V
Sbjct: 984 PPPPLSAPYGQITAA-----------------RRTDNFMNFLRLKGNILTGGRVEAGPVV 1026
Query: 178 IRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSS 237
I + V S+ + +S V + R T G + T + G G
Sbjct: 1027 IESTQVGSSATPSSSATES----------CVIPVTHGTESRATVIGGVSRTFAVPGFGRR 1076
Query: 238 GARDLTMCEMTVTSSPGGSSASAEPPAQKP-----AAEDRKRKGRETDDEYHSEDVELES 292
G + TSS G A EP +P AEDRK+K RE VE++
Sbjct: 1077 G--KAVAIDTAGTSSSGVCKAETEPVRIQPETETEIAEDRKQKERE------ETIVEIQG 1128
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
+ ++RGSTS KRSRAAE+HNL+ERRRR++INEKM+ LQELIPRCNKS K S L++ I
Sbjct: 1129 TE---EARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDVI 1185
Query: 353 EYLKSLQLQVQMMSMGCGVVPMMF--PGVQQYMPNMGMGI 390
EY+KSLQ+Q+QMMSMG G++P M +QQ+MP+M MG+
Sbjct: 1186 EYMKSLQMQIQMMSMGHGMMPPMMNAENMQQFMPHMAMGM 1225
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 188/426 (44%), Gaps = 108/426 (25%)
Query: 7 LLNRAEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPRE-------IPSSHHHQ 59
L NR E+D++EL W+ G VV +Q + P S E HHQ
Sbjct: 1317 LKNRGEDDIVELFWKIGQVVRSSQTEIPSSDPTPILRGRGSRGGEENVPLPPPLPPPHHQ 1376
Query: 60 QEQQDHLFMQEDEMASWL-HYPLNDTNFDSDFCTDLLY---PAPCITSTTTTTATATATP 115
+LF+QED+M+SW+ H+PL D+ LY PAP
Sbjct: 1377 -----NLFIQEDDMSSWIHHHPLLQ-----DYLCSQLYASTPAP---------------- 1410
Query: 116 PVRATRVRDSRPQLNTATTVASAPPLRPP--------IPPPPRRTENFGLFARHMPREVA 167
PQ S+ PL PP I PRR EN F R + +
Sbjct: 1411 ----------HPQ--------SSVPLAPPQSSAPYGQIIIAPRREENVMNFLR-LRGNIL 1451
Query: 168 SGPSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAA 227
+G S I V S+ T +S + A S+ +G G
Sbjct: 1452 TGGSVEAGPWI---PVGSSATTSLSATESNLTPATESLPTVTG-----------GVFHTF 1497
Query: 228 TSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSED 287
+ GG T+CE+ TSS G EP +PA E GRE + +
Sbjct: 1498 SVPSRGGKEKAVAIQTVCEIAGTSSSG---VETEPVRIQPATETDIADGRERKEREET-- 1552
Query: 288 VELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
+ +++RGSTS KRSRAAE+HNL+ERRRR++INEKM+ LQELIPRCNKS K S
Sbjct: 1553 --IAGIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVST 1610
Query: 348 LDEAIEYLKSLQLQVQ----------------------MMSMGCGVVPMMF-PGVQQYMP 384
L++ IEY+KSL++Q+Q MMS GC +PMM+ QQ+MP
Sbjct: 1611 LEDVIEYVKSLEMQIQHYVMNFRIMTEVLISESMLLCKMMSTGCSTMPMMYTSNTQQFMP 1670
Query: 385 NMGMGI 390
+M MG+
Sbjct: 1671 HMAMGM 1676
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 185/393 (47%), Gaps = 82/393 (20%)
Query: 10 RAEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSS-----------HHH 58
R E+D++ELLW++G VV +Q QR P S E + HH
Sbjct: 341 RGEDDIVELLWKSGRVVQSSQTQRPSSDPPPILRGSGSGGGEEEENAPLPPPPPLPPLHH 400
Query: 59 QQEQQDHLFMQEDEMASWLHYPLNDTNFDSDF-CTDLLYPAPCITSTTTTTATATATPPV 117
Q +LF+QEDEM SWLH ++ D+ C++L Y + S T ++ +P
Sbjct: 401 Q-----NLFIQEDEMYSWLH-----QSYRQDYLCSELRYSG--VASNPATHPQSSISPAP 448
Query: 118 RATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVT 177
D R Q T+A+ RR ENF F+ G ++
Sbjct: 449 CPFAPYDQRGQ-----TIAT------------RRVENFMNFSWLRGNIFTGG--RVEAGV 489
Query: 178 IRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSS 237
+RES + SS TP+ + + EG + + T + G G
Sbjct: 490 VRESIQLGSSTTPSSSATESC--VIPATEGTE-------------SRVSQTLAVPGLGQK 534
Query: 238 GARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKK 297
G + E T S G A EP +PA VE++ +
Sbjct: 535 G--KAVVIETAETPSSGVCKAETEPVQIQPAT-----------------IVEIQGTE--- 572
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
++RGS S KRSR AE+HNL+ERRRR++INE ++ LQELIPRCNKS K S LD+AIEY+K
Sbjct: 573 EARGSMSRKRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKSTKVSTLDDAIEYVKW 632
Query: 358 LQLQVQMMSMGCGVV-PMMFPG-VQQYMPNMGM 388
LQ Q+QMMS G G++ PMM+ G QQ+MP+M M
Sbjct: 633 LQSQIQMMSTGQGMMPPMMYAGNTQQFMPHMAM 665
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 84/112 (75%), Gaps = 5/112 (4%)
Query: 289 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASML 348
+L +++RGSTS KRSRAAE+HNL+ERRRR++INEKM+ LQELIPRCNKS K S L
Sbjct: 118 QLRGVQGTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTL 177
Query: 349 DEAIEYLKSLQLQVQMMSMGCGVVPMMF--PGVQQYMPNMGMGIGMGMGMGR 398
D AIEY+K LQ Q+QM+ MG G++P M +Q++MP+M M + MGM R
Sbjct: 178 DAAIEYVKWLQSQIQMILMGQGMMPSMMNEENMQEFMPHMAMKM---MGMNR 226
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 25/123 (20%)
Query: 10 RAEEDVMELLWQNGPVVLHNQNQRS----------LKKSQPSFPADQSAPREIPSSHHHQ 59
R E+D++ELLW++G +V Q QR + + S D++AP +P
Sbjct: 755 RGEDDIVELLWKSGQLVRTTQTQRPSSDKPSSPPPVLRGSGSGGGDENAPLPLPLPQPPP 814
Query: 60 QEQQDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRA 119
+LF+QEDE++SWLH NF YP T T ++ + PP A
Sbjct: 815 PLHHQNLFIQEDELSSWLH------NF---------YPGVTSTPATHPQSSVSLPPPSNA 859
Query: 120 TRV 122
+
Sbjct: 860 PYI 862
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 99/126 (78%), Gaps = 7/126 (5%)
Query: 273 KRKGRETDD-EYHSEDVELESAD--AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
KRK +T+D E SED E SA A+K + T+A+RSRAAEVHNLSERRRRDRINEKM
Sbjct: 294 KRKRLDTEDSESPSEDAESGSAAMLARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKM 353
Query: 330 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV----PMMFPGVQQYMPN 385
RALQELIP CNK+DKASMLDEAIEYLKSLQLQVQMM MG + +MFPGV QY+P
Sbjct: 354 RALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAPPAVMFPGVHQYLPR 413
Query: 386 MGMGIG 391
MG+G+G
Sbjct: 414 MGVGMG 419
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 99/126 (78%), Gaps = 7/126 (5%)
Query: 273 KRKGRETDD-EYHSEDVELESAD--AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
KRK +T+D E SED E SA A+K + T+A+RSRAAEVHNLSERRRRDRINEKM
Sbjct: 294 KRKRLDTEDSESPSEDAESGSAAMLARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKM 353
Query: 330 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV----PMMFPGVQQYMPN 385
RALQELIP CNK+DKASMLDEAIEYLKSLQLQVQMM MG + +MFPGV QY+P
Sbjct: 354 RALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAPPAVMFPGVHQYLPR 413
Query: 386 MGMGIG 391
MG+G+G
Sbjct: 414 MGVGMG 419
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 191/400 (47%), Gaps = 81/400 (20%)
Query: 11 AEEDVMELLWQNGPVVLHNQNQR-------SLKKSQPSFPADQSAPREIPSSHHHQQEQQ 63
E+D++ELL ++ VV +Q Q L+ S + P +HQQ
Sbjct: 23 GEDDIVELLGKSSQVVTSSQTQTPSCDPPLILRGSGSGDGEGNGPLPQPPPPLYHQQS-- 80
Query: 64 DHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVR 123
LF+QEDEMASWLH P N + LLY ++ + A+ PP RA +
Sbjct: 81 --LFIQEDEMASWLHQP----NRQDYLYSQLLYSG-VASTHPQSLASLEPPPPPRAQYIL 133
Query: 124 DS-RPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASG----PSNSKSVTI 178
+ RP T +A RR ENF +R G PSNS +
Sbjct: 134 AADRP---TGHILAE------------RRAENFMNISRQRGNIFLGGVEAVPSNSTLL-- 176
Query: 179 RESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSG 238
S A+E++ + G R T G + T + G G G
Sbjct: 177 -----------------SSATESIPATHG-------TESRATVTGGVSRTFAVPGLGPRG 212
Query: 239 ARDLTMCEMTVTSSPGGSSASAEPPAQKPAAE-----DRKRKGRETDDEYHSEDVELESA 293
E T S G A EP ++PA E +RKRK RE E + E+ E A
Sbjct: 213 --KAVAIETAGTQSWGLCKAETEPVQRQPATETDITDERKRKTRE---ETNVENQGTEEA 267
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 353
R STS+KRSRAA +H LSERRRR +INE M+ALQEL+PRC K+D++SMLD+ IE
Sbjct: 268 ------RDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIE 321
Query: 354 YLKSLQLQVQMMSMGCGVV-PMMFPG--VQQYMPNMGMGI 390
Y+KSLQ Q+QM SMG ++ PMM+ G QQYMP+M MG+
Sbjct: 322 YVKSLQSQIQMFSMGHVMIPPMMYAGNIQQQYMPHMAMGM 361
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/131 (67%), Positives = 101/131 (77%), Gaps = 12/131 (9%)
Query: 258 ASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKK--QSRGSTSAKRSRAAEVH 314
AS +PP +RKRK +T+D E+HS+DVE + D K+ +RG+ S KRSRAAEVH
Sbjct: 415 ASDDPP------HNRKRKCHDTEDSEWHSDDVEEDCNDVKRVTSARGAGS-KRSRAAEVH 467
Query: 315 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-- 372
NLSERRRRDRINEKMRALQELIP CNK DKASMLDEAIEYLK+LQLQVQ+MSMG G+
Sbjct: 468 NLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLFMP 527
Query: 373 PMMFPGVQQYM 383
PMMFPG M
Sbjct: 528 PMMFPGAMAPM 538
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 124/198 (62%), Gaps = 20/198 (10%)
Query: 217 CRNTSGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKG 276
CR + A +S G S G + + E T+TSS GG S EP + + RK
Sbjct: 640 CRLSGVTNGAVLASSDKGASHGTQHPDVQEPTITSSSGGYGTSIEPLQKVRTSNKRKCSE 699
Query: 277 RETDDEYHSEDVELESADAKKQ----SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 332
RE + E SED E ES D K + RGST+ KRSRAAEVHN SERRRRDRINEKMRAL
Sbjct: 700 RE-ETECQSEDGEDESVDTKHKPITTGRGSTT-KRSRAAEVHNQSERRRRDRINEKMRAL 757
Query: 333 QELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMF-PGVQQY------- 382
QELIP NK+DKASMLDEAI+YLK LQLQ+QMMS+ G+ PM+ PG+Q
Sbjct: 758 QELIPNSNKTDKASMLDEAIDYLKILQLQLQMMSIRTGMTLPPMVMPPGLQHMQMPQMPQ 817
Query: 383 ---MPNMGMGIGMGMGMG 397
MP+MGM + MG+GMG
Sbjct: 818 VAAMPSMGM-VQMGLGMG 834
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 110/165 (66%), Gaps = 18/165 (10%)
Query: 235 GSSGARDLTMCEMT----VTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVE 289
G S + L E T V SS GS SAE P+ P E+ KRK R+T++ E SED E
Sbjct: 241 GESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPT-ENLKRKHRDTEESEGPSEDAE 299
Query: 290 LESADAKK--QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
ES AKK +R +KR RAAEVHNLSERRRRDRINEKMRALQELIP CNK DKASM
Sbjct: 300 EESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASM 359
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
LDEAIEYLK+LQLQVQ+MSMG G+ YMP+M + GM
Sbjct: 360 LDEAIEYLKTLQLQVQIMSMGAGI----------YMPSMMLPPGM 394
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/115 (73%), Positives = 92/115 (80%), Gaps = 2/115 (1%)
Query: 272 RKRKGRETDDEYHSEDVELESAD-AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
RKR D E SED E ESA A+K T+A+RSRAAEVHNLSERRRRDRINEKMR
Sbjct: 280 RKRLDTTEDSESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMR 339
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQYMP 384
ALQELIP CNK+DKASMLDEAIEYLKSLQLQ+QMM MG G+ P+MFPGV QY+P
Sbjct: 340 ALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVMFPGVHQYLP 394
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/115 (73%), Positives = 92/115 (80%), Gaps = 2/115 (1%)
Query: 272 RKRKGRETDDEYHSEDVELESAD-AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
RKR D E SED E ESA A+K T+A+RSRAAEVHNLSERRRRDRINEKMR
Sbjct: 280 RKRLDTTEDSESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMR 339
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQYMP 384
ALQELIP CNK+DKASMLDEAIEYLKSLQLQ+QMM MG G+ P+MFPGV QY+P
Sbjct: 340 ALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVMFPGVHQYLP 394
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 106/150 (70%), Gaps = 14/150 (9%)
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKKQ--SRGS 302
E V SS GS S E + P E+ KRK R+T++ E SEDVE ES AKKQ +R
Sbjct: 392 EPVVASSSVGSDNSVERASDDPT-ENLKRKHRDTEESEGPSEDVEEESVGAKKQAPARAG 450
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 362
+KR+RAAEVHNLSERRRRDRINEKMRALQELIP CNK DKASMLDEAIEYLK+LQLQV
Sbjct: 451 NGSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQV 510
Query: 363 QMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
Q+MSMG G+ YMP+M + GM
Sbjct: 511 QIMSMGAGL----------YMPSMMLPPGM 530
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 110/165 (66%), Gaps = 18/165 (10%)
Query: 235 GSSGARDLTMCEMT----VTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVE 289
G S + L E T V SS GS SAE P+ P E+ KRK R+T++ E SED E
Sbjct: 241 GESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPT-ENLKRKHRDTEESEGPSEDAE 299
Query: 290 LESADAKK--QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
ES AKK +R +KR RAAEVHNLSERRRRDRINEKMRALQELIP CNK DKASM
Sbjct: 300 EESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASM 359
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
LDEAIEYLK+LQLQVQ+MSMG G+ YMP+M + GM
Sbjct: 360 LDEAIEYLKTLQLQVQIMSMGAGM----------YMPSMMLPPGM 394
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 110/165 (66%), Gaps = 18/165 (10%)
Query: 235 GSSGARDLTMCEMT----VTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVE 289
G S + L E T V SS GS SAE P+ P E+ KRK R+T++ E SED E
Sbjct: 241 GESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPT-ENLKRKHRDTEESEGPSEDAE 299
Query: 290 LESADAKK--QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
ES AKK +R +KR RAAEVHNLSERRRRDRINEKMRALQELIP CNK DKASM
Sbjct: 300 EESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASM 359
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
LDEAIEYLK+LQLQVQ+MSMG G+ YMP+M + GM
Sbjct: 360 LDEAIEYLKTLQLQVQIMSMGAGM----------YMPSMMLPPGM 394
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 110/165 (66%), Gaps = 18/165 (10%)
Query: 235 GSSGARDLTMCEMT----VTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVE 289
G S + L E T V SS GS SAE P+ P E+ KRK R+T++ E SED E
Sbjct: 241 GESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPT-ENLKRKHRDTEESEGPSEDAE 299
Query: 290 LESADAKK--QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
ES AKK +R +KR RAAEVHNLSERRRRDRINEKMRALQELIP CNK DKASM
Sbjct: 300 EESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASM 359
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
LDEAIEYLK+LQLQVQ+MSMG G+ YMP+M + GM
Sbjct: 360 LDEAIEYLKTLQLQVQIMSMGAGM----------YMPSMMLPPGM 394
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/115 (73%), Positives = 92/115 (80%), Gaps = 2/115 (1%)
Query: 272 RKRKGRETDDEYHSEDVELESAD-AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
RKR D E SED E ESA A+K T+A+RSRAAEVHNLSERRRRDRINEKMR
Sbjct: 261 RKRLDTTEDSESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMR 320
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQYMP 384
ALQELIP CNK+DKASMLDEAIEYLKSLQLQ+QMM MG G+ P+MFPGV QY+P
Sbjct: 321 ALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVMFPGVHQYLP 375
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 19/85 (22%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQED 71
+++++ELLW NG VV+ +QN +K P P ++ +QED
Sbjct: 21 DDNLIELLWCNGHVVMQSQNHH--RKLPPRPP----------------EKAAAAAAVQED 62
Query: 72 EMASWLHYPLNDTNFDSDFCTDLLY 96
E W + L D+ + D +DL Y
Sbjct: 63 EAGLWFPFALADS-LEKDIFSDLFY 86
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 110/165 (66%), Gaps = 18/165 (10%)
Query: 235 GSSGARDLTMCEMT----VTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVE 289
G S + L E T V SS GS SAE P+ P E+ KRK R+T++ E SED E
Sbjct: 241 GESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPT-ENLKRKHRDTEESEGPSEDAE 299
Query: 290 LESADAKK--QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
ES AKK +R +KR RAAEVHNLSERRRRDRINEKMRALQELIP CNK DKASM
Sbjct: 300 EESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASM 359
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGM 392
LDEAIEYLK+LQLQVQ+MSMG G+ YMP+M + GM
Sbjct: 360 LDEAIEYLKTLQLQVQIMSMGAGM----------YMPSMMLPPGM 394
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 111/158 (70%), Gaps = 13/158 (8%)
Query: 235 GSSGARDLTMCEMT----VTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVE 289
G SG + T E + V SS S A+ + +P ++ KRK ++TDD E HSE+
Sbjct: 294 GDSGTKGQTAAEKSMEPAVASSSVCSGTGADQGSDEPN-QNLKRKTKDTDDSECHSEE-- 350
Query: 290 LESADAKKQS--RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
ESA AKK + +G +KRSRAAEVHNLSERRRRDRINEKMRALQELIP CNK DKASM
Sbjct: 351 -ESAGAKKTAGGQGGAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASM 409
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYM 383
LDEAIEYLK+LQLQVQ+MSMG G+ PMM P Q+M
Sbjct: 410 LDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPAGMQHM 447
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
Query: 274 RKGRETDDEYHSEDVE-LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 332
++GR+ D+ ED + E+ D + SR +R+RAAEVHN SERRRRDRINEKM+AL
Sbjct: 107 KRGRDELDDSRCEDADDCEAVDETRTSRRPAGKRRARAAEVHNQSERRRRDRINEKMKAL 166
Query: 333 QELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
QEL+P CNKSDKAS+LDEAIEYLKSLQLQVQ+M M G+ PMMFPG Q MP M MG+
Sbjct: 167 QELVPHCNKSDKASILDEAIEYLKSLQLQVQIMWMTTGMAPMMFPGAHQLMPQMAMGL 224
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 117/179 (65%), Gaps = 10/179 (5%)
Query: 217 CRNTSGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKG 276
CR + A +S G S + L + E T+TSS G + SAEPP + RK
Sbjct: 501 CRLSGVTNGAVLASSEKGASHCTQHLDIQEPTITSSSGRYATSAEPPKEPVTGTKRKSSE 560
Query: 277 RETDDEYHSEDVELESADAKKQ----SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 332
RE + E SED+E ES D K++ R ST+ KRSRAAEVHN SERRRRDRINEKMRAL
Sbjct: 561 RE-EPECQSEDMEDESVDTKQKPATTGRVSTT-KRSRAAEVHNQSERRRRDRINEKMRAL 618
Query: 333 QELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PM-MFPGVQQY-MPNMG 387
QELIP NK+DKASMLDEAIEYLK LQLQ+QMMS+ G+ PM M PG+Q MP MG
Sbjct: 619 QELIPNSNKTDKASMLDEAIEYLKMLQLQLQMMSIRTGMTLPPMVMPPGLQHMQMPQMG 677
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/114 (72%), Positives = 93/114 (81%), Gaps = 6/114 (5%)
Query: 285 SEDVELESADAK-KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD 343
SEDVE ESA A ++ +T+AKR RAAEVHNLSERRRRDRINEKM+ALQELIP CNK+D
Sbjct: 253 SEDVEFESAAATCSPAQKTTTAKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTD 312
Query: 344 KASMLDEAIEYLKSLQLQVQMMSMGCGVVP--MMFP--GVQQYMPNMGMGIGMG 393
KASMLDEAIEYLKSLQLQ+QMM MG G+ P +MFP GV QYM MG +GMG
Sbjct: 313 KASMLDEAIEYLKSLQLQLQMMWMGGGMAPRAVMFPAAGVHQYMQRMG-AVGMG 365
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 24/84 (28%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQED 71
++ ++ELLW NG VV+ +Q R +P P +A M ED
Sbjct: 23 DDGLVELLWCNGHVVMQSQTPR-----KPPRPERAAAA------------------MAED 59
Query: 72 EMASWLHYPLNDTNFDSDFCTDLL 95
E ASW YP++D + D T+L
Sbjct: 60 ESASWFQYPVDDV-LEKDLFTELF 82
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 191/446 (42%), Gaps = 104/446 (23%)
Query: 14 DVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQ---- 69
+ ELLW+NG V+H + K QPSF + + H F +
Sbjct: 64 EFAELLWENGQAVVHGRR----KHPQPSFQPFGTGSSGVQEKHPGGAGDNMMAFTKAAGV 119
Query: 70 ------------------EDEMASWLHYPL--NDTN----------FDSDFCTDLLYPAP 99
+D+ W+HYP+ +D N + SDF ++L A
Sbjct: 120 FGGMGIHDLASGLQHENGDDDAVPWIHYPIMEDDNNNNAPALTTADYSSDFFSELQEAAA 179
Query: 100 CITS---TTTTTATATATPPVRATRVRDSRPQLNTATTVASAPP----LRPPIPPPPRRT 152
+ S + +T TP ++R Q +A T +A P P P
Sbjct: 180 NLGSLPPSNHSTNNNRGTPVAGSSRAASKEIQGLSALTTRTAEPQAELAAAKQPRPSDSV 239
Query: 153 ENFGLFAR------------HMPREVASGPSNSKSVTIRESTVVDSSDTP---------- 190
NF LF+R H P+ P N+ + ESTV+ ++ P
Sbjct: 240 MNFSLFSRPAALARATLQSAHRPQGTDKVP-NAAANNRMESTVIQTTSGPRTGPVFVDQR 298
Query: 191 -----------APGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGA 239
AP P AS E A +NNR + A A
Sbjct: 299 AAWPQQKEVRFAPAPALTASVGNLQQEMARDKLSNNRVVHKDAARKAP------------ 346
Query: 240 RDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQS 299
D T+ +V S G + EP Q+ KRK + ED++ ES + +
Sbjct: 347 -DATVTTSSVCS--GNGIVNDEPWHQQ------KRKIQAECSASQDEDLDDESGALLRST 397
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
+ S KRSR AEVHNLSERRRRDRINEKMRALQELIP CNK DKASMLDEAIEYLK+LQ
Sbjct: 398 --NRSMKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQ 455
Query: 360 LQVQMMSMGCGVV--PMMFPGVQQYM 383
LQVQMMSMG G+ PM+ P Q++
Sbjct: 456 LQVQMMSMGTGLCIPPMLLPPAMQHL 481
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 113/178 (63%), Gaps = 9/178 (5%)
Query: 217 CRNTSGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKG 276
C+N + + G G + + E V S S S E + P + KRK
Sbjct: 371 CKNEKSSNQVLGARTAKGIPDGEKTI---EPAVACSSVCSGNSVERASNDPK-HNLKRKC 426
Query: 277 RETDD-EYHSEDVELESADAKKQS--RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQ 333
R+T++ E SEDVE ES +K + +G T +KRSRAAEVHNLSERRRRDRINEKMRALQ
Sbjct: 427 RDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQ 486
Query: 334 ELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYMPNMGMG 389
ELIP CNK DKASMLDEAIEYLK+LQLQVQ+MSMG G+ PMM P Q++ MG
Sbjct: 487 ELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMG 544
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKS-QPSFPADQSAPREIPSSHHHQQEQQDHLFM-- 68
E D +EL+W+ G +++ Q+ R+ K SFP+ PR+ + H + M
Sbjct: 29 ENDFVELVWEGGQIMMQGQSSRARKSPLSNSFPSHTPKPRDKDTGHGTNSKMGKFGSMDF 88
Query: 69 -----------------QEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATA 111
Q+D+M WL+YP+ D + D+C+D L +T +T
Sbjct: 89 ILNDFPLSVPSAEMGLSQDDDMVPWLNYPI-DESLQHDYCSDFLQELSGVTVNELSTHCN 147
Query: 112 TAT 114
A+
Sbjct: 148 FAS 150
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/122 (68%), Positives = 95/122 (77%), Gaps = 5/122 (4%)
Query: 273 KRKGRETDD-EYHSEDVELESADAKKQS--RGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
KRK R+T++ E SEDVE ES +K + +G T +KRSRAAEVHNLSERRRRDRINEKM
Sbjct: 408 KRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKM 467
Query: 330 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYMPNMG 387
RALQELIP CNK DKASMLDEAIEYLK+LQLQVQ+MSMG G+ PMM P Q++
Sbjct: 468 RALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAH 527
Query: 388 MG 389
MG
Sbjct: 528 MG 529
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKS-QPSFPADQSAPREIPSSHHHQQEQQDHLFM-- 68
E D +EL+W+ G +++ Q+ R+ K SFP+ PR+ + H + M
Sbjct: 29 ENDFVELVWEGGQIMMQGQSSRARKSPLSNSFPSHTPKPRDKDTGHGTNSKMGKFGSMDF 88
Query: 69 -----------------QEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATA 111
Q+D+M WL+YP+ D + D+C+D L +T +T
Sbjct: 89 ILNDFPLSVPSAEMGLSQDDDMVPWLNYPI-DESLQHDYCSDFLQELSGVTVNELSTHCN 147
Query: 112 TAT 114
A+
Sbjct: 148 FAS 150
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 100/144 (69%), Gaps = 7/144 (4%)
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQ---SRGS 302
E V S GS S + P++ P+ +++ D + HSEDVE ES D +K+ SR
Sbjct: 277 EKAVVCSSVGSGNSLDGPSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTG 336
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 362
+KRSR+AEVHNLSERRRRDRINEKMRALQELIP CNK DKASMLDEAIEYLKSLQLQV
Sbjct: 337 LGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQV 396
Query: 363 QMMSMGCGVV---PMMF-PGVQQY 382
Q+MSM G +MF PG+ Y
Sbjct: 397 QIMSMASGYYLPPAVMFPPGMGHY 420
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 84/100 (84%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
E AD + S+ + +R+RAAEVHNLSERRRRDRINEK+RALQEL+P CNK+DKAS+LDE
Sbjct: 310 EVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDE 369
Query: 351 AIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
AIEYLKSLQ+QVQ+M M G+VPMMFPG Q MP MGMG+
Sbjct: 370 AIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGL 409
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 84/100 (84%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
E AD + S+ + +R+RAAEVHNLSERRRRDRINEK+RALQEL+P CNK+DKAS+LDE
Sbjct: 211 EVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDE 270
Query: 351 AIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
AIEYLKSLQ+QVQ+M M G+VPMMFPG Q MP MGMG+
Sbjct: 271 AIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGL 310
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 84/100 (84%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
E AD + S+ + +R+RAAEVHNLSERRRRDRINEK+RALQEL+P CNK+DKAS+LDE
Sbjct: 210 EVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDE 269
Query: 351 AIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
AIEYLKSLQ+QVQ+M M G+VPMMFPG Q MP MGMG+
Sbjct: 270 AIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGL 309
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 103/144 (71%), Gaps = 14/144 (9%)
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKKQS--RGS 302
E V SS S S E + +P ++ KRK RET++ E SEDVE ES KK + RG
Sbjct: 400 EPIVASSSVCSGNSMERVSDEPM-QNLKRKHRETEESEGPSEDVEEESVGGKKAAPARGG 458
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 362
T +KRSRAAEVHNLSERRRRDRINEKMRALQELIP CNK DKASMLDEAIEYLK+LQLQV
Sbjct: 459 TGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQV 518
Query: 363 QMMSMGCGVVPMMFPGVQQYMPNM 386
Q+MSMG G+ YMP+M
Sbjct: 519 QIMSMGAGL----------YMPSM 532
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 99/144 (68%), Gaps = 7/144 (4%)
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQ---SRGS 302
E V S GS S + P++ P+ +++ D + HSEDVE ES D +K+ SR
Sbjct: 277 EKAVVCSSVGSGNSLDGPSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTG 336
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 362
+KRSR AEVHNLSERRRRDRINEKMRALQELIP CNK DKASMLDEAIEYLKSLQLQV
Sbjct: 337 LGSKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQV 396
Query: 363 QMMSMGCGVV---PMMF-PGVQQY 382
Q+MSM G +MF PG+ Y
Sbjct: 397 QIMSMASGYYLPPAVMFPPGMGHY 420
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 84/100 (84%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
E AD + S+ + +R+RAAEVHNLSERRRRDRINEK+RALQEL+P CNK+DKAS+LDE
Sbjct: 386 EVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDE 445
Query: 351 AIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
AIEYLKSLQ+QVQ+M M G+VPMMFPG Q MP MGMG+
Sbjct: 446 AIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGL 485
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 84/100 (84%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
E AD + S+ + +R+RAAEVHNLSERRRRDRINEK+RALQEL+P CNK+DKAS+LDE
Sbjct: 207 EVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDE 266
Query: 351 AIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
AIEYLKSLQ+QVQ+M M G+VPMMFPG Q MP MGMG+
Sbjct: 267 AIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGL 306
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/117 (69%), Positives = 94/117 (80%), Gaps = 5/117 (4%)
Query: 276 GRETDD-EYHSEDVELES-ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQ 333
G +T+D E SED E ES A +K + T+A+RSRAAEVHNLSERRRRDRINEKMRALQ
Sbjct: 1 GLDTEDSESPSEDAESESLALDRKPPQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQ 60
Query: 334 ELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV---PMMFPGVQQYMPNMG 387
ELIP CNK+DKASMLDEAIEYLK+LQ+QVQMM MG G+ +MFPG+ QY+P MG
Sbjct: 61 ELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMGGGMAAPPAVMFPGMHQYLPQMG 117
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 145/294 (49%), Gaps = 39/294 (13%)
Query: 103 STTTTTATATAT-PPVRATRVRDSRPQLNTATTVA---SAPPLRPPIPPPPRRTENFGLF 158
ST+ T TA P A D QL + T A P P PPP G
Sbjct: 56 STSGLTGEETAAWFPDAALEDDDMYAQLWHSVTTAPDGGGLPAGPSSRPPP------GDL 109
Query: 159 ARHMPREVASGPSNSKSVTIRESTVVDSSDTP-APGPDSRASEAMRSMEGASGVNNNNRC 217
A H A P +S ST S+ P P S A+ S EG
Sbjct: 110 A-HQTAAAARPPMSSSWTGDLCSTFCGSNQGPVVPAGGGEGSAALPS-EG---------T 158
Query: 218 RNTSGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGR 277
R TS A T +G + + S+ GG KRKGR
Sbjct: 159 RGTSTRDGAGTFTGTSSSGGSGSNFGASGLPSESTHGG----------------HKRKGR 202
Query: 278 ETDD-EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELI 336
DD + SED E E+ + K SR S +RSRAAEVHN SERRRRDRINEKMR+LQELI
Sbjct: 203 GRDDSDSRSEDAEFEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELI 262
Query: 337 PRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
P CNK+DKAS+LDEAIEYLKSLQ+Q+Q+M M G+ PMMFPG Q+MP M MG+
Sbjct: 263 PHCNKADKASILDEAIEYLKSLQMQLQIMWMTTGMAPMMFPGAHQFMPPMAMGM 316
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/122 (65%), Positives = 101/122 (82%), Gaps = 1/122 (0%)
Query: 270 EDRKRKGRETDD-EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEK 328
+ +KRKG + ++ E SED EL+SA K S+ + SA+R+RAAEVHNLSERRRRDRINEK
Sbjct: 28 QGQKRKGIDVEESEEQSEDTELKSALGNKSSQRTGSARRNRAAEVHNLSERRRRDRINEK 87
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGM 388
M+ALQ+LIP +K+DKASML+EAIEYLKSLQLQ+Q+M MG G+ P+MFPG+Q YM MGM
Sbjct: 88 MKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQLMWMGSGMAPIMFPGIQHYMSQMGM 147
Query: 389 GI 390
G+
Sbjct: 148 GM 149
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 90/124 (72%), Gaps = 2/124 (1%)
Query: 272 RKRKGRETDDEYH--SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
KRKGR DD + E+ + K SR +R+RAAEVHNLSERRRRDRINEKM
Sbjct: 191 HKRKGRCRDDSDSPSEDAECEEATEETKPSRRHGPKRRTRAAEVHNLSERRRRDRINEKM 250
Query: 330 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMG 389
RALQELIP CNK+DKAS+LDE IEYLKSLQ+QVQ+M M G+ PMMFPG Q+MP M +G
Sbjct: 251 RALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSGMAPMMFPGAHQFMPPMALG 310
Query: 390 IGMG 393
+ G
Sbjct: 311 MNSG 314
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 92/118 (77%), Gaps = 5/118 (4%)
Query: 277 RETDDEYHSEDVELESAD----AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 332
+ + DE+ ED +L++ D + + R +++ +R+RAAEVHN+SERRRRDRINEKMRAL
Sbjct: 213 KRSRDEF-DEDADLDTVDETPPSSRDRRPASNKRRTRAAEVHNMSERRRRDRINEKMRAL 271
Query: 333 QELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
QEL+P CNK+DKAS+LDEAIEYLKSLQ+QVQ+M M G+ PMM PG Q MP M MG+
Sbjct: 272 QELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMSTGMAPMMIPGAHQLMPPMTMGL 329
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 100/122 (81%), Gaps = 1/122 (0%)
Query: 270 EDRKRKGRETDD-EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEK 328
+ +KRKG + ++ E SED EL+SA K S+ + A+R+RAAEVHNLSERRRRDRINEK
Sbjct: 161 QGQKRKGIDVEESEEQSEDTELKSALGNKSSQRAGLARRNRAAEVHNLSERRRRDRINEK 220
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGM 388
M+ALQ+LIP +K+DKASML+EAIEYLKSLQLQ+Q+M MG G+ P+MFPG+Q YM MGM
Sbjct: 221 MKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQLMWMGSGMAPIMFPGIQHYMSQMGM 280
Query: 389 GI 390
G+
Sbjct: 281 GM 282
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 184/403 (45%), Gaps = 90/403 (22%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQED 71
++ ++ELLW NG VV+ +Q APR+ P + M ED
Sbjct: 23 DDGLVELLWCNGHVVMQSQ-----------------APRKPPRP--EKTTAAAAAAMAED 63
Query: 72 EMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDSRPQLNT 131
E ASW YP++D + D T+L TA VR ++ R
Sbjct: 64 ESASWFQYPVDDV-LEKDLFTELF---------GEMTAAGGGGGDVRRAACKEER----- 108
Query: 132 ATTVASAPPLRPPIPPPPRRTENFG----------LFARHMPREVASGPSNSKSVTIRES 181
A + PP P P R FG + M A+ S+ S
Sbjct: 109 GAVAAFQSRMMPP-PWPARGKAEFGDVDDVCGVSEVVMAKMDGAAAAETVGESSMLTIGS 167
Query: 182 TVVDSSDTPAP------GPDSRASEAMRSMEGASGVNNNNRCRN-TSGAGAAATSSGGGG 234
++ S+ P A A R+ + A+ +++ R R+ T+ A ++ G G
Sbjct: 168 SICGSNHVQTPPVGNGKAGAGTAGAARRAHDTATVASSSMRSRSCTAKAEPRDVAAAGVG 227
Query: 235 GSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESAD 294
G R GG++ + P++ D E+ S +A
Sbjct: 228 GKRKQR-------------GGAAMESGSPSE--------------DVEFES-----AAAT 255
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
+ +T+ +R RAAEVHNLSERRRRDRINEKM+ALQELIP CNK+DKASMLDEAIEY
Sbjct: 256 CSPAQKTTTAKRR-RAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEY 314
Query: 355 LKSLQLQVQMMSMGCGVVP--MMFP--GVQQYMPNMGMGIGMG 393
LKSLQLQ+QMM MG G+ P +MFP GV QYM MG +GMG
Sbjct: 315 LKSLQLQLQMMWMGGGMAPPAVMFPAAGVHQYMQRMG-AVGMG 356
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 184/403 (45%), Gaps = 90/403 (22%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQED 71
++ ++ELLW NG VV+ +Q APR+ P + M ED
Sbjct: 23 DDGLVELLWCNGHVVMQSQ-----------------APRKPPRP--EKTTAAAAAAMAED 63
Query: 72 EMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDSRPQLNT 131
E ASW YP++D + D T+L TA VR ++ R
Sbjct: 64 ESASWFQYPVDDV-LEKDLFTELF---------GEMTAAGGGGGDVRRAACKEER----- 108
Query: 132 ATTVASAPPLRPPIPPPPRRTENFG----------LFARHMPREVASGPSNSKSVTIRES 181
A + PP P P R FG + M A+ S+ S
Sbjct: 109 GAVAAFQSRMMPP-PWPARGKAEFGDVDDVCGVSEVVMAKMDGAAAAETVGESSMLTIGS 167
Query: 182 TVVDSSDTPAP------GPDSRASEAMRSMEGASGVNNNNRCRN-TSGAGAAATSSGGGG 234
++ S+ P A A R+ + A+ +++ R R+ T+ A ++ G G
Sbjct: 168 SICGSNHVQTPPVGNGKAGAGTAGAARRAHDTATVASSSMRSRSCTAKAEPRDVAAAGVG 227
Query: 235 GSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESAD 294
G R GG++ + P++ D E+ S +A
Sbjct: 228 GKRKQR-------------GGAAMESGSPSE--------------DVEFES-----AAAT 255
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
+ +T+ +R RAAEVHNLSERRRRDRINEKM+ALQELIP CNK+DKASMLDEAIEY
Sbjct: 256 CSPAQKTTTAKRR-RAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEY 314
Query: 355 LKSLQLQVQMMSMGCGVVP--MMFP--GVQQYMPNMGMGIGMG 393
LKSLQLQ+QMM MG G+ P +MFP GV QYM MG +GMG
Sbjct: 315 LKSLQLQLQMMWMGGGMAPPAVMFPAAGVHQYMQRMG-AVGMG 356
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 98/141 (69%), Gaps = 17/141 (12%)
Query: 254 GGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEV 313
G +SAS P + P A R R S V A+K T+A+RSRAAEV
Sbjct: 125 GAASASGSTPPRTPRAPARTRS--------RSRLV------ARKPPAKMTTARRSRAAEV 170
Query: 314 HNLSERRRRDRINEKMRALQEL--IPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV 371
HNLSERRRRDRINEKMRALQEL IP CNK+DKASMLDEAIEYLKSLQLQ+++M MG G+
Sbjct: 171 HNLSERRRRDRINEKMRALQELELIPHCNKTDKASMLDEAIEYLKSLQLQLRVMWMGSGM 230
Query: 372 V-PMMFPGVQQYMPNMGMGIG 391
P+MFPGV QY+P MG+ IG
Sbjct: 231 APPLMFPGVHQYLPRMGVRIG 251
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 83/99 (83%), Gaps = 4/99 (4%)
Query: 273 KRKGRETDD-EYHSEDVELESADAKK--QSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
KRK RETD+ E HS+DVE E KK +RG S KRSRAAEVHNLSERRRRDRINEKM
Sbjct: 417 KRKFRETDESECHSDDVEEEYMGVKKGDHARGMGS-KRSRAAEVHNLSERRRRDRINEKM 475
Query: 330 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 368
RALQELIP CNK DKASMLDEAIEYLK+LQLQVQMMSMG
Sbjct: 476 RALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMG 514
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 26/122 (21%)
Query: 12 EEDVMELLWQNGPVVLHNQNQRSLK----KSQPSFPADQSAPREIPSSHHHQ-------- 59
E D +EL+W+NG VV+ Q+ R+ K + PS+ ++ R++ +S+ +
Sbjct: 20 ENDFLELVWENGQVVMQGQSSRTRKNPSCNTLPSYNTPKNRDRDVGNSNIGKTGKFGFVV 79
Query: 60 QEQQDHL----------FMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTA 109
+ D + ++D+ WL+Y + D ++C D L P +S T A
Sbjct: 80 DSELDEIPLSVPSSEMGLSEDDDTLPWLNYSI-DEPLHHEYCHDFL---PEFSSATANEA 135
Query: 110 TA 111
++
Sbjct: 136 SS 137
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
+KRK + + S+D +L+ + G+ S KRSR AEVHNLSERRRRDRINEKMRA
Sbjct: 275 QKRKCQAQAECSASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRA 334
Query: 332 LQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYM 383
LQELIP CNK DKASMLDEAIEYLK+LQLQVQMMSMG G+ PM+ P Q++
Sbjct: 335 LQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGTGLCIPPMLLPTAMQHL 388
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
+KRK + + S+D +L+ + G+ S KRSR AEVHNLSERRRRDRINEKMRA
Sbjct: 347 QKRKCQAQAECSASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRA 406
Query: 332 LQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYM 383
LQELIP CNK DKASMLDEAIEYLK+LQLQVQMMSMG G+ PM+ P Q++
Sbjct: 407 LQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGTGLCIPPMLLPTAMQHL 460
>gi|4218118|emb|CAA22972.1| putative protein [Arabidopsis thaliana]
gi|7269735|emb|CAB81468.1| putative protein [Arabidopsis thaliana]
Length = 478
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 196/441 (44%), Gaps = 130/441 (29%)
Query: 2 RISIFLLNRAEEDVMELLWQNGPVVLHNQNQRS------LKKSQPSFPADQSAPREIPSS 55
R+ I+ R E+D++ELLWQ+G VV NQ R + + S +++AP P
Sbjct: 9 RVWIWFEIRREDDIVELLWQSGQVVGTNQTHRQSYDPPPILRGSGSGRGEENAPLSQPPP 68
Query: 56 HHHQQEQQDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATP 115
H HQQ +LF+QE EM SWLH+ N+ FC++LL P AT
Sbjct: 69 HLHQQ----NLFIQEGEMYSWLHHSYRQ-NY---FCSELLNSTP-------------ATH 107
Query: 116 PVRATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMP------REVASG 169
P S L T+A+ RR ENF F+ R +G
Sbjct: 108 P-------QSSISLAPRQTIAT------------RRAENFMNFSWLRGNIFTGGRVDEAG 148
Query: 170 PSNSKSVTIRESTVVDSSDTPAPGPDSRASEA--MRSMEG-ASGVNNNNRCRNTSGAGAA 226
PS S +RES V S+ TP P S A+E+ + + EG AS V+ + G A
Sbjct: 149 PSFS---VVRESMQVGSNTTP---PSSSATESCVIPATEGTASRVSGTLAAHDLGRKGKA 202
Query: 227 ATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSE 286
G SSG +C+ A EP +PA E + + ET
Sbjct: 203 VAVEAAGTPSSG-----VCK-----------AETEPVQIQPATESKLKAREETH------ 240
Query: 287 DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK--SDK 344
+++RGSTS KRSR AE+HNL+ERRRR++INEKM+ LQ+LIPRCNK SD
Sbjct: 241 --------GTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKVESDS 292
Query: 345 ASMLDEAIEYLKSLQLQ-----------------------------------VQMMSMGC 369
S L +++ + + L V+MMS G
Sbjct: 293 VSTLISLLKFQRWMMLSSTSNRYRAKYKYALQNRMCFKPMVQHGKSSYVSSFVEMMSTGQ 352
Query: 370 GVV-PMMFPG-VQQYMPNMGM 388
G++ PMM G QQ+MP+M M
Sbjct: 353 GMMSPMMNAGNTQQFMPHMAM 373
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
+KRK + + S+D +L+ + G+ S KRSR AEVHNLSERRRRDRINEKMRA
Sbjct: 403 QKRKCQAQAECSASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRA 462
Query: 332 LQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYM 383
LQELIP CNK DKASMLDEAIEYLK+LQLQVQMMSMG G+ PM+ P Q++
Sbjct: 463 LQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGTGLCIPPMLLPTAMQHL 516
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
+KRK + + S+D +L+ + G+ S KRSR AEVHNLSERRRRDRINEKMRA
Sbjct: 415 QKRKCQAQAECSASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRA 474
Query: 332 LQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYM 383
LQELIP CNK DKASMLDEAIEYLK+LQLQVQMMSMG G+ PM+ P Q++
Sbjct: 475 LQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGTGLCIPPMLLPTAMQHL 528
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 110/163 (67%), Gaps = 12/163 (7%)
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKK--QSRGS 302
E+TV SS S + A ++ KRK +++D E+HSED E ES K+ RG
Sbjct: 364 ELTVASSSVCSDNGVHRSSDD-ANQNLKRKNLDSEDSEWHSEDFEDESIGVKRTDHGRGV 422
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 362
T +K++R+ EVHNLSERRRRDRINE+MRALQELIP CNK+DKASMLDEAIEYLKSLQLQ+
Sbjct: 423 TGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKADKASMLDEAIEYLKSLQLQL 482
Query: 363 QMMSMGCG--VVPMMFPGVQQYM------PNMGMGIGMGMGMG 397
Q+MSMG G +PM P Q+M P M + M MG+G
Sbjct: 483 QIMSMGGGGLYMPMTLPAGMQHMHAAHMFPFSPMSVAMQMGLG 525
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 84/118 (71%), Gaps = 13/118 (11%)
Query: 270 EDRKRKGRETDDEYHSEDVELESADAKKQS--RGSTSAKRSRAAEVHNLSERRRRDRINE 327
ED + EDVE ES KK + RG +KRSRAAEVHNLSERRRRDRINE
Sbjct: 436 EDSECHS---------EDVEDESVGVKKGAAGRGVAGSKRSRAAEVHNLSERRRRDRINE 486
Query: 328 KMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYM 383
KMRALQELIP CNK DKASMLDEAIEYLK+LQLQVQMMSMG G+ MM P Q+M
Sbjct: 487 KMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMPQMMLPAGMQHM 544
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 158/337 (46%), Gaps = 70/337 (20%)
Query: 65 HLFMQ-----EDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRA 119
H+ MQ E E W YP++D+ + D +++ P A TP
Sbjct: 37 HVVMQSQAVRELEATPWFQYPIDDSLEEKDLFSEIFGRMP---------ADGAGTPWKEE 87
Query: 120 TRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVTI- 178
+ R + + +V +PPP T+ GL H P +G S+ ++
Sbjct: 88 DQGRGAADAVTALRSVL--------MPPPLLLTDKAGLHG-HGPPVSEAGESSVVTMAFG 138
Query: 179 RESTVVDSSDTP----APGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGG 234
R + + TP A G D R + S E G R+ A A T+S
Sbjct: 139 RPCGGSNEAQTPHVSDAAG-DDRVLLPLSSKEARDG-------RSYHSASATLTTSSAWS 190
Query: 235 GSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESAD 294
SGA C+ G E+ E +DVE ESAD
Sbjct: 191 RPSGASKRKQCD-----------------------------GAESPGEVMQQDVESESAD 221
Query: 295 AK-KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 353
+ ++ +AKR RAA+VHNLSERRRRDRINEKMRALQEL+P CNK+DKASMLDEAIE
Sbjct: 222 VTCETAQKPATAKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNKTDKASMLDEAIE 281
Query: 354 YLKSLQLQVQMM-SMGCGV--VPMMFP-GVQQYMPNM 386
YLKSLQLQ+Q+M +MG + P+MFP G QYM M
Sbjct: 282 YLKSLQLQLQVMWAMGGRMAPAPVMFPAGAHQYMQRM 318
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 75/90 (83%), Gaps = 8/90 (8%)
Query: 287 DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK----- 341
DVE ESAD KKQ RGSTS KRSRAAEVHNLSERRRRDRINEKM+ALQELIPRCNK
Sbjct: 36 DVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFT 95
Query: 342 ---SDKASMLDEAIEYLKSLQLQVQMMSMG 368
+DKASMLDEAIEYLK+LQLQVQ+ +
Sbjct: 96 DSQTDKASMLDEAIEYLKTLQLQVQIFVLN 125
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 97/138 (70%), Gaps = 5/138 (3%)
Query: 234 GGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESA 293
G + ARD+ M + T+ + +E P P A R K R+ +D +EDV LE
Sbjct: 181 GDVARARDVLMVTSSSTTRSRSCTTKSEQPGPGPGAARRSGK-RKHNDATDAEDVGLECE 239
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 353
A++ +T+AKR RAA+VHNLSERRRRDRINEKM+ALQELIP CNK+DKASMLDEAIE
Sbjct: 240 PAQR----TTTAKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIE 295
Query: 354 YLKSLQLQVQMMSMGCGV 371
YLKSLQLQ+Q++ MG G+
Sbjct: 296 YLKSLQLQLQVVWMGGGI 313
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 88/121 (72%), Gaps = 6/121 (4%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQ-SRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
R K +++ D +EDVE ESAD + + + +AKR RAAEVHNLSERRRRDRINEKM+
Sbjct: 276 RSGKRKQSVDATDAEDVEFESADVTCEPAHKTATAKRRRAAEVHNLSERRRRDRINEKMK 335
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ----MMSMGCGVVPMMFP-GVQQYMPN 385
ALQELIP CNK+DKASMLDEAIEYLKSLQLQ+Q M P++FP GV QYM
Sbjct: 336 ALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGGGMAAAAAPVVFPAGVHQYMQR 395
Query: 386 M 386
M
Sbjct: 396 M 396
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 71/84 (84%), Gaps = 2/84 (2%)
Query: 302 STSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQ 361
S AKRSR AEVHNLSERRRRDRINEKMRALQELIP CNK DKASMLDEAIEYLK+LQLQ
Sbjct: 377 SRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQ 436
Query: 362 VQMMSMGCGVV--PMMFPGVQQYM 383
VQMMSMG G+ PM+ P Q++
Sbjct: 437 VQMMSMGSGLCIPPMLLPPAMQHL 460
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 86/116 (74%), Gaps = 7/116 (6%)
Query: 272 RKRKGRETD-DEYHSEDVELESADAKKQ-SRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
+KRK + + +D + ES ++ SRG AKRSR AEVHNLSERRRRDRINEKM
Sbjct: 145 QKRKTLQAECSASQDDDPDDESGGMRRSCSRG---AKRSRTAEVHNLSERRRRDRINEKM 201
Query: 330 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYM 383
RALQELIP CNK DKASMLDEAIEYLK+LQLQVQMMSMG G+ PM+ P Q++
Sbjct: 202 RALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGSGLCIPPMLLPPAMQHL 257
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 110/170 (64%), Gaps = 19/170 (11%)
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDVELESADAKK--QSRGS 302
E+TV SS S + A ++ KRK +++D E+HSED E ES K+ RG
Sbjct: 364 ELTVASSSVCSDNGVHRSSDD-ANQNLKRKNLDSEDSEWHSEDFEDESIGVKRTDHGRGV 422
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-------SDKASMLDEAIEYL 355
T +K++R+ EVHNLSERRRRDRINE+MRALQELIP CNK +DKASMLDEAIEYL
Sbjct: 423 TGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYL 482
Query: 356 KSLQLQVQMMSMGCG--VVPMMFPGVQQYM------PNMGMGIGMGMGMG 397
KSLQLQ+Q+MSMG G +PM P Q+M P M + M MG+G
Sbjct: 483 KSLQLQLQIMSMGGGGLYMPMTLPAGMQHMHAAHMFPFSPMSVAMQMGLG 532
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 81/113 (71%), Gaps = 2/113 (1%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
R++K + + S+D +L+ + G KRSR AEVHNLSERRRRDRINEKMRA
Sbjct: 315 REQKRKSQAECSASQDDDLDDESGGMRGSGGRGTKRSRTAEVHNLSERRRRDRINEKMRA 374
Query: 332 LQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQY 382
LQELIP CNK DKASMLDEAIEYLK+LQLQVQMM+MG G+ PM+ P Q
Sbjct: 375 LQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMAMGSGLCIPPMLLPRAMQL 427
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 81/113 (71%), Gaps = 2/113 (1%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
R++K + + S+D +L+ + G KRSR AEVHNLSERRRRDRINEKMRA
Sbjct: 125 REQKRKSQAECSASQDDDLDDESGGMRGSGGRGTKRSRTAEVHNLSERRRRDRINEKMRA 184
Query: 332 LQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQY 382
LQELIP CNK DKASMLDEAIEYLK+LQLQVQMM+MG G+ PM+ P Q
Sbjct: 185 LQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMAMGSGLCIPPMLLPRAMQL 237
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/369 (34%), Positives = 165/369 (44%), Gaps = 76/369 (20%)
Query: 11 AEEDVMELLWQNGPVVLHNQNQR-------SLKKSQPSFPADQSAPREIPSSHHHQQEQQ 63
E+D++ELL ++ VV +Q Q L+ S + P +HQQ
Sbjct: 23 GEDDIVELLGKSSQVVTSSQTQTPSCDPPLILRGSGSGDGEGNGPLPQPPPPLYHQQS-- 80
Query: 64 DHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVR 123
LF+QEDEMASWLH P N + LLY T + + PP +
Sbjct: 81 --LFIQEDEMASWLHQP----NRQDYLYSQLLYSGVASTHPQSLASLEPPPPPRAQYILA 134
Query: 124 DSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASG----PSNSKSVTIR 179
RP T +A RR ENF +R G PSNS +
Sbjct: 135 ADRP---TGHILAE------------RRAENFMNISRQRGNIFLGGVEAVPSNSTLL--- 176
Query: 180 ESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGA 239
S A+E++ + G R T G + T + G G G
Sbjct: 177 ----------------SSATESIPATHG-------TESRATVTGGVSRTFAVPGLGPRG- 212
Query: 240 RDLTMCEMTVTSSPGGSSASAEPPAQKPAAE-----DRKRKGRETDDEYHSEDVELESAD 294
E T S G A EP ++PA E +RKRK RE E + E+ E A
Sbjct: 213 -KAVAIETAGTQSWGLCKAETEPVQRQPATETDITDERKRKTRE---ETNVENQGTEEA- 267
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
R STS+KRSRAA +H LSERRRR +INE M+ALQEL+PRC K+D++SMLD+ IEY
Sbjct: 268 -----RDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEY 322
Query: 355 LKSLQLQVQ 363
+KSLQ Q+Q
Sbjct: 323 VKSLQSQIQ 331
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 80/115 (69%), Gaps = 4/115 (3%)
Query: 273 KRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 332
KR D S D +L+ + + SAKR R AEVHNLSERRRRDRINEKMRAL
Sbjct: 286 KRSRHLAADCSVSPDEDLDDEPGATRRSAARSAKRCRTAEVHNLSERRRRDRINEKMRAL 345
Query: 333 QELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV----PMMFPGVQQYM 383
QELIP CNK DK+SML+EAIEYLK+LQLQVQMMSMG G+ M+ P +QQ +
Sbjct: 346 QELIPNCNKVDKSSMLEEAIEYLKTLQLQVQMMSMGTGLCMPPAAMLLPAMQQQL 400
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 77/92 (83%), Gaps = 2/92 (2%)
Query: 287 DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS 346
D++ E A ++S + S+KRSR AEVHNLSERRRRDRINEKMRALQELIP CNK DKAS
Sbjct: 314 DLDDELAGVHRRS-AARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKAS 372
Query: 347 MLDEAIEYLKSLQLQVQMMSMGCGV-VPMMFP 377
ML+EAIEYLK+LQLQVQMMSMG G+ VP FP
Sbjct: 373 MLEEAIEYLKTLQLQVQMMSMGTGMFVPPPFP 404
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 93/145 (64%), Gaps = 14/145 (9%)
Query: 266 KPAAEDRKRKGRETDD-EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
+P + + + DD + SE+ + S + K + +S KRSRAAEVHNLSE+RRR R
Sbjct: 140 EPCKKKKAHNDTDLDDLDCESEEGQEPSEEMSKPAPSRSSTKRSRAAEVHNLSEKRRRSR 199
Query: 325 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV--VPMMFPGVQQY 382
INEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM+SM G+ PM PG Q
Sbjct: 200 INEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMKSGINLAPMCMPGQLQS 259
Query: 383 M--PNMGMG---------IGMGMGM 396
M P + MG I MGMG+
Sbjct: 260 MQLPQICMGFTTENGTLPITMGMGL 284
>gi|145334163|ref|NP_001078462.1| transcription factor bHLH119 [Arabidopsis thaliana]
gi|218563522|sp|Q8GT73.2|BH119_ARATH RecName: Full=Transcription factor bHLH119; AltName: Full=Basic
helix-loop-helix protein 119; Short=AtbHLH119;
Short=bHLH 119; AltName: Full=Transcription factor EN
104; AltName: Full=bHLH transcription factor bHLH119
gi|332660147|gb|AEE85547.1| transcription factor bHLH119 [Arabidopsis thaliana]
Length = 544
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 193/395 (48%), Gaps = 63/395 (15%)
Query: 11 AEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPRE-----IPSSHHHQQEQQDH 65
+E+DV+ELLW++G VV Q QR + P F S E +P H Q +
Sbjct: 107 SEDDVVELLWKSGQVVQSIQTQRPIPP--PIFRGSGSGGGEETVLPLPPLHPSHQ----N 160
Query: 66 LFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDS 125
+F+QEDEMASWL++PL F S + ST+ T ++A+
Sbjct: 161 IFIQEDEMASWLYHPLRQDYFSSG-----------VASTSATRPQSSASLAPTPPPPSVP 209
Query: 126 RPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVTIRESTVVD 185
Q+ P RRTENF F R + G + V I EST +
Sbjct: 210 YGQI-----------------PVERRTENFMNFLRLRGNIFSGGRVEAGPVVI-ESTQIG 251
Query: 186 SSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMC 245
SS + + + R + G + T + G G G T
Sbjct: 252 SSA---------TPSSSAAESCVIPATHGTESRAAAITGVSRTFAVPGLGRRGKEVAT-- 300
Query: 246 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSA 305
E TS G + A E +P +R+ + T+D+ E + +++ GSTS
Sbjct: 301 ETAGTSYSGVNKAETERVQIQP-----ERETKITEDKKREETIA--EIQGTEEAHGSTSR 353
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAA++HNLSERRRR+RINE+M+ LQEL+PRC K+DK SML++ IEY+KSLQLQ+QMM
Sbjct: 354 KRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMM 413
Query: 366 SMGCGVVPMMFP--GVQQYMPNMGMGIGMGMGMGR 398
SMG G++P M QQ+MP+M MG+ GM R
Sbjct: 414 SMGHGMMPPMMHEGNTQQFMPHMAMGM---KGMNR 445
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 11/79 (13%)
Query: 11 AEEDVMELLWQNGPVVLHNQNQR-SLKKSQPSFP---------ADQSAPREIPSSHHHQQ 60
E+D++ELLW NG VV +Q QR S K P+ P +++AP +P +
Sbjct: 2 GEDDIVELLW-NGQVVRTSQPQRPSSGKPSPTPPILRGSGSGSGEENAPLPLPLLQPPRP 60
Query: 61 EQQDHLFMQEDEMASWLHY 79
+LF++E+EM+SWLHY
Sbjct: 61 LHHQNLFIREEEMSSWLHY 79
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
Query: 273 KRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 332
KR D S D +++ + + SAKRSR AEVHN+SERRRRDRINEKMRAL
Sbjct: 225 KRSCHLAADCSVSPDEDMDDEPGATRRSAARSAKRSRTAEVHNMSERRRRDRINEKMRAL 284
Query: 333 QELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNM 386
QELIP CNK DKASML+EAIEYLK+LQLQVQMMSMG G+ P +P M
Sbjct: 285 QELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGLC---MPPAAMLLPAM 335
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 100/169 (59%), Gaps = 18/169 (10%)
Query: 232 GGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELE 291
GGGGSS ++ S G + E ++ + + D E +E E+
Sbjct: 62 GGGGSS----------SLNYSDQGGYFAKESAERRGVSMENDLGDLSCDSEKGAEVAEVP 111
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEA 351
S + ++ S+KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEA
Sbjct: 112 SETVRPRN----SSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEA 167
Query: 352 IEYLKSLQLQVQMMSM--GCGVVPMMFPGVQQYM--PNMGMGIGMGMGM 396
IEYLK LQLQVQM++M G + PM PGV Q M P GM G G+
Sbjct: 168 IEYLKQLQLQVQMLTMRNGLSLHPMCLPGVLQPMQLPLTGMSFDEGGGL 216
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 83/110 (75%), Gaps = 6/110 (5%)
Query: 278 ETDDEYHSEDVE-LESADAKKQSRGS---TSAKRSRAAEVHNLSERRRRDRINEKMRALQ 333
ETD E E E LE+ + Q++ + +S+KRSRAAEVHNLSE+RRR RINEKM+ALQ
Sbjct: 126 ETDHECDCESEEGLEALIEEVQTKAAPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ 185
Query: 334 ELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMFPGVQQ 381
LIP NK+DKASMLDEAIEYLK LQLQVQM+S+ G G+ PM PGV Q
Sbjct: 186 NLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNGIGLHPMCLPGVLQ 235
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 287 DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS 346
D++ E A ++S + S+KRSR AEVHNLSERRRRDRINEKMRALQELIP CNK DKAS
Sbjct: 314 DLDDELAGVHRRS-AARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKAS 372
Query: 347 MLDEAIEYLKSLQLQVQMMSMGCGVV 372
ML+EAIEYLK+LQLQVQMMSMG G+
Sbjct: 373 MLEEAIEYLKTLQLQVQMMSMGTGMF 398
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 287 DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS 346
D++ E A ++S + S+KRSR AEVHNLSERRRRDRINEKMRALQELIP CNK DKAS
Sbjct: 193 DLDDELAGVHRRS-AARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKAS 251
Query: 347 MLDEAIEYLKSLQLQVQMMSMGCGVV 372
ML+EAIEYLK+LQLQVQMMSMG G+
Sbjct: 252 MLEEAIEYLKTLQLQVQMMSMGTGMF 277
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 287 DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS 346
D++ E A ++S + S+KRSR AEVHNLSERRRRDRINEKMRALQELIP CNK DKAS
Sbjct: 98 DLDDELAGVHRRS-AARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKAS 156
Query: 347 MLDEAIEYLKSLQLQVQMMSMGCGVV 372
ML+EAIEYLK+LQLQVQMMSMG G+
Sbjct: 157 MLEEAIEYLKTLQLQVQMMSMGTGMF 182
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 128/225 (56%), Gaps = 31/225 (13%)
Query: 193 GPDSRASEAMRSMEGASGVNNN-----NRCRNTSGAGAAATSSGGGGGSSGARDLTMCEM 247
GP R++EA E + V +N RC + + ++ G R ++ ++
Sbjct: 263 GPIDRSAEASPPDEQSEAVLHNYATTSKRCCDRVFGSTSGSAEKKIKGKPD-RGKSIDQL 321
Query: 248 TVTSSPGGSSASAEPPAQKPAAEDRKRKGRETD-DEYHSEDVELESADAKKQSRGSTSAK 306
T TSS AS +P +R+ +T+ Y S+D+E E + +RGS +K
Sbjct: 322 TATSSICSRGASNDP------TSSLERQYEDTEGTAYSSDDLEEEE---QVPARGSAGSK 372
Query: 307 RSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
R RA E+HNLSER+RRDRIN+KMRALQ+LIP NK DKASML EAI+YLKSLQLQVQMMS
Sbjct: 373 RRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMS 432
Query: 367 MGCGV-VPMMF----------PGVQQYMPNMGMGIG---MGMGMG 397
MG + +P+M P + Q+ P MG+G+ M MG+G
Sbjct: 433 MGTRLCMPLMMLPTGMQHIHAPLLAQFSP-MGVGMDTRLMQMGVG 476
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 90/144 (62%), Gaps = 9/144 (6%)
Query: 257 SASAEPPAQKPAAEDRKRKGRETD-DEYHSEDVE----LESADAKKQSRGSTSAKRSRAA 311
S++A PA P E + DEY E E L A K G +S+KRSRAA
Sbjct: 101 SSAALLPAGNPNVSSSSFGASENETDEYDCESEEGLEALVEEAAGKPGCGRSSSKRSRAA 160
Query: 312 EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GC 369
EVHN+SE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM+SM G
Sbjct: 161 EVHNMSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGM 220
Query: 370 GVVPMMFPGVQQ--YMPNMGMGIG 391
+ PM PG Q + M M +G
Sbjct: 221 SLHPMCLPGALQPVQVSQMRMDLG 244
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 128/225 (56%), Gaps = 31/225 (13%)
Query: 193 GPDSRASEAMRSMEGASGVNNN-----NRCRNTSGAGAAATSSGGGGGSSGARDLTMCEM 247
GP R++EA E + V +N RC + + ++ G R ++ ++
Sbjct: 269 GPIDRSAEASPPDEQSEAVLHNYATTSKRCCDRVFGSTSGSAEKKIKGKPD-RGKSIDQL 327
Query: 248 TVTSSPGGSSASAEPPAQKPAAEDRKRKGRETD-DEYHSEDVELESADAKKQSRGSTSAK 306
T TSS AS +P +R+ +T+ Y S+D+E E + +RGS +K
Sbjct: 328 TATSSICSRGASNDP------TSSLERQYEDTEGTAYSSDDLEEEE---QVPARGSAGSK 378
Query: 307 RSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
R RA E+HNLSER+RRDRIN+KMRALQ+LIP NK DKASML EAI+YLKSLQLQVQMMS
Sbjct: 379 RRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMS 438
Query: 367 MGCGV-VPMMF----------PGVQQYMPNMGMGIG---MGMGMG 397
MG + +P+M P + Q+ P MG+G+ M MG+G
Sbjct: 439 MGTRLCMPLMMLPTGMQHIHAPLLAQFSP-MGVGMDTRLMQMGVG 482
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 82/121 (67%), Gaps = 9/121 (7%)
Query: 280 DDEYHSEDVE-----LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQE 334
+DE+ E E +E K R +S+KRSRAAEVHNLSE+RRR RINEKM+ALQ
Sbjct: 142 NDEFDCESEEGLEALVEELPTKPNPR--SSSKRSRAAEVHNLSEKRRRSRINEKMKALQN 199
Query: 335 LIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMFPGVQQYMPNMGMGIGM 392
LIP NK+DKASMLDEAIEYLK LQLQVQM+SM G + PM PG QY+ M +
Sbjct: 200 LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMNLPGSLQYLQLSHMRMDF 259
Query: 393 G 393
G
Sbjct: 260 G 260
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 82/121 (67%), Gaps = 9/121 (7%)
Query: 280 DDEYHSEDVE-----LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQE 334
+DE+ E E +E K R +S+KRSRAAEVHNLSE+RRR RINEKM+ALQ
Sbjct: 142 NDEFDCESEEGLEALVEELPTKPNPR--SSSKRSRAAEVHNLSEKRRRSRINEKMKALQN 199
Query: 335 LIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMFPGVQQYMPNMGMGIGM 392
LIP NK+DKASMLDEAIEYLK LQLQVQM+SM G + PM PG QY+ M +
Sbjct: 200 LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMNLPGSLQYLQLSHMRMDF 259
Query: 393 G 393
G
Sbjct: 260 G 260
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 99/141 (70%), Gaps = 17/141 (12%)
Query: 271 DRKRKG-RETDDEYHSE-DVELES----ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
DRKRK +TD E S+ DV L S A K S+ S S +RSRAAEVHNLSERRRRDR
Sbjct: 216 DRKRKHVMDTDQESVSQSDVRLMSMEDQAIGNKSSQRSGSTRRSRAAEVHNLSERRRRDR 275
Query: 325 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV---------VPMM 375
INE+M+ALQELIP C+K+DKAS+LDEAI+YLKSLQ+Q+Q+M MG G+ PMM
Sbjct: 276 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASTPMM 335
Query: 376 FPGVQQ--YMPNMGMGIGMGM 394
FPGVQQ Y+ M M M +
Sbjct: 336 FPGVQQSPYINQMAMQSQMQL 356
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 10 RAEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQ 69
R E++++ELLW++G VVL +Q +R + DQ+ + + +Q + + ++
Sbjct: 24 RPEDELVELLWRDGQVVLQSQARREPSVQVQAHKHDQTLGKPNNTLLDNQVRKPNGTILE 83
Query: 70 EDEMASWLHYPLNDT 84
+ E SW+ YP D
Sbjct: 84 DQETVSWIQYPPEDV 98
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 82/119 (68%), Gaps = 8/119 (6%)
Query: 281 DEYHSEDVE----LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELI 336
DEY E E L A K + +S+KRSRAAEVHNLSE+RRR RINEKM+ALQ LI
Sbjct: 107 DEYDCESEEGLEALVEEVATKAAPLRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLI 166
Query: 337 PRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMFPGVQ--QYMPNMGMGIG 391
P NK+DKASMLDEAIEYLK LQLQVQM+SM G + PM PGV + M +GIG
Sbjct: 167 PNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCLPGVLPPVQLSQMRIGIG 225
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 69/81 (85%)
Query: 286 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 345
ED++ E+ ++ + G+ S KR R AEVHN+SERRRRDRINEKMRALQELIP CNK DKA
Sbjct: 246 EDLDDEAGGLRRSAAGARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKA 305
Query: 346 SMLDEAIEYLKSLQLQVQMMS 366
SML+EAIEYLK+LQLQVQMMS
Sbjct: 306 SMLEEAIEYLKTLQLQVQMMS 326
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Query: 290 LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
+E A ++S T+ +RSR+AE HN SERRRRDRINEK++ALQEL+P C K+DK SMLD
Sbjct: 1 MEDGSAPRRSTPPTT-RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLD 59
Query: 350 EAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYM 383
EAI+YLKSLQLQ+QM+ MG G+ P++ P +QQYM
Sbjct: 60 EAIDYLKSLQLQLQMLVMGKGMAPVVPPELQQYM 93
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 81/120 (67%), Gaps = 14/120 (11%)
Query: 286 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 345
ED++ E+ ++ + ST KR R AEVHN+SERRRRDRINEKMRALQELIP CNK DKA
Sbjct: 303 EDLDDEAGGLRRSAARST--KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKA 360
Query: 346 SMLDEAIEYLKSLQLQVQMMS-MGCG--VVPMMFPGVQQYMPNM---------GMGIGMG 393
SML+EAIEYLK+LQLQVQMMS MG +P M MP M MG GMG
Sbjct: 361 SMLEEAIEYLKTLQLQVQMMSTMGTAGMCMPPMLAMQHMQMPPMAHFHHHHLGAMGFGMG 420
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 81/120 (67%), Gaps = 14/120 (11%)
Query: 286 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 345
ED++ E+ ++ + ST KR R AEVHN+SERRRRDRINEKMRALQELIP CNK DKA
Sbjct: 303 EDLDDEAGGLRRSAARST--KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKA 360
Query: 346 SMLDEAIEYLKSLQLQVQMMS-MGCG--VVPMMFPGVQQYMPNM---------GMGIGMG 393
SML+EAIEYLK+LQLQVQMMS MG +P M MP M MG GMG
Sbjct: 361 SMLEEAIEYLKTLQLQVQMMSTMGTAGMCMPPMLAMQHMQMPPMAHFHHHHLGAMGFGMG 420
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 81/120 (67%), Gaps = 14/120 (11%)
Query: 286 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 345
ED++ E+ ++ + ST KR R AEVHN+SERRRRDRINEKMRALQELIP CNK DKA
Sbjct: 307 EDLDDEAGGLRRSAARST--KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKA 364
Query: 346 SMLDEAIEYLKSLQLQVQMMS-MGCG--VVPMMFPGVQQYMPNM---------GMGIGMG 393
SML+EAIEYLK+LQLQVQMMS MG +P M MP M MG GMG
Sbjct: 365 SMLEEAIEYLKTLQLQVQMMSTMGTAGMCMPPMLAMQHMQMPPMAHFHHHHLGAMGFGMG 424
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Query: 304 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
S+KRSR+AEVHN+SE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQ
Sbjct: 191 SSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 250
Query: 364 MMSM--GCGVVPMMFPGVQQ--YMPNMGMGIGMG 393
M+SM G + PM PGV Q +P MG+ +G
Sbjct: 251 MLSMRNGLSLQPMCLPGVLQPIQLPQMGLDFDVG 284
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 75/94 (79%)
Query: 290 LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
+E A ++ + + +RSR+A+ HN SERRRRDRINEK++ALQEL+P C K+DK SMLD
Sbjct: 1 MEDGRAARRMSSAPTTRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLD 60
Query: 350 EAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYM 383
EAI+YLKSLQLQ+QM+ MG G+ P++ P +QQYM
Sbjct: 61 EAIDYLKSLQLQLQMLVMGKGMAPVVPPELQQYM 94
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 97/140 (69%), Gaps = 16/140 (11%)
Query: 271 DRKRKG-RETDDEYHSE-DVELESAD----AKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
DRKRK + D E S+ D+ L S D K S+ S S +RSRAAEVHNLSERRRRDR
Sbjct: 210 DRKRKHVMDADQESVSQSDIGLTSTDDQAMGNKSSQRSGSTRRSRAAEVHNLSERRRRDR 269
Query: 325 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV--------VPMMF 376
INE+M+ALQELIP C+K+DKAS+LDEAI+YLKSLQ+Q+Q+M MG G+ PMMF
Sbjct: 270 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAATTPMMF 329
Query: 377 PGVQQ--YMPNMGMGIGMGM 394
PGVQ Y+ M M M +
Sbjct: 330 PGVQSSPYINQMAMQSQMQL 349
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 32/136 (23%)
Query: 10 RAEEDVMELLWQNGPVVLHNQ----------NQRSLKKSQPSFPADQSAPREIPSSHHHQ 59
R E+D++ELLW++G VVL +Q Q SL+K F +Q ++ +S
Sbjct: 24 RPEDDLVELLWRDGQVVLQSQARREPSVQTHKQESLRKPNNIFLDNQETVQKPSNS---- 79
Query: 60 QEQQDHLFMQEDEMASWLHYPLNDTN--FDSDFCTDLLYPAP---------CITSTTTTT 108
+Q+ E SW++YP +D F+S+ + I T
Sbjct: 80 -------VLQDQETVSWINYPPDDVIDPFESELSSHFFSSIDHVHGPEKPRTIEETVKHE 132
Query: 109 ATATATPPVRATRVRD 124
A A A P R++ ++D
Sbjct: 133 AQAMAPPKFRSSVIKD 148
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 12/131 (9%)
Query: 273 KRKGRETDDE---YHSEDVELESADAKKQSRGSTS---AKRSRAAEVHNLSERRRRDRIN 326
KRK + ++E Y S + + ES DAK Q T KR R+ EVH L ER+RRD N
Sbjct: 187 KRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFN 246
Query: 327 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYMP 384
+KMRALQ+L+P C K DKAS+LDEAI+Y+++LQLQVQMMSMG G++ P M P + +Y P
Sbjct: 247 KKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSMGNGLIRPPTMLP-MGKYSP 305
Query: 385 NMGMGIGMGMG 395
MG+GM MG
Sbjct: 306 ---MGLGMHMG 313
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 87/129 (67%), Gaps = 8/129 (6%)
Query: 273 KRKGRETDDEYHSEDVELESADAKKQSRGST----SAKRSRAAEVHNLSERRRRDRINEK 328
KR+G ++++ + E D + + S+KRSR+AEVHN+SE+RRR RINEK
Sbjct: 156 KRRGLSSENDLGDFSCDSEGGDLPEVPSSTNLPRNSSKRSRSAEVHNMSEKRRRRRINEK 215
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMFPGVQQ--YMP 384
M+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM+SM G + PM PG+ Q +P
Sbjct: 216 MKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLQPMCLPGMLQPIQLP 275
Query: 385 NMGMGIGMG 393
MG+ +G
Sbjct: 276 QMGLDYDVG 284
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 88/131 (67%), Gaps = 12/131 (9%)
Query: 273 KRKGRETDDE---YHSEDVELESADAKKQSRGSTS---AKRSRAAEVHNLSERRRRDRIN 326
KRK + ++E Y S + + ES DAK Q T KR R+ EVH L ER+RRD N
Sbjct: 187 KRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFN 246
Query: 327 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYMP 384
+KMRALQ+L+P C K DKAS+LDEAI+Y+++LQLQVQMMSMG G++ P M P + Y P
Sbjct: 247 KKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSMGNGLIRPPTMLP-MGHYSP 305
Query: 385 NMGMGIGMGMG 395
MG+GM MG
Sbjct: 306 ---MGLGMHMG 313
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 114/216 (52%), Gaps = 19/216 (8%)
Query: 182 TVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNN---RCRNTSGAGAAATSSGGGGGSSG 238
TV S+ P P P SEA+ G G++ + RC TS + A + ++
Sbjct: 208 TVERSTKLPTP-PVDEHSEAVGHNCGVLGIHRSQGQLRCDQTSTSEALIRAKAKAYNNNA 266
Query: 239 ARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQ 298
MC + +S S A + P RK + D E + D + E D KQ
Sbjct: 267 ----NMCHEPLLASSSVCSLGA---SNDPNLGLRKHE----DTETYLSDNDGEPEDMVKQ 315
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
R +R R VHNLSE++RR++IN+KMR L+ELIP CNK DKASMLD+AI+YLK+L
Sbjct: 316 DRDGNRVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTL 375
Query: 359 QLQVQMMSMGCGVVP-MMFPG---VQQYMPNMGMGI 390
+LQ+Q+MSMG G+ P MM P P +GMG
Sbjct: 376 KLQLQIMSMGNGLWPLMMLPAATTAHHMNPQLGMGF 411
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 69/84 (82%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
ES D KK TS+KRSRAAEVHNLSERRRRDRINEKM+ALQELIP NK+DKASMLDE
Sbjct: 2 ESVDVKKAPPARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDE 61
Query: 351 AIEYLKSLQLQVQMMSMGCGVVPM 374
AIEYLK LQLQ+Q++S G V +
Sbjct: 62 AIEYLKMLQLQLQVLSPGSSKVSL 85
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 71/84 (84%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R + A+RSR+AE HN SERRRRD+INEK++ALQEL+P CNK+DK SMLDEAI+YLKSLQ
Sbjct: 9 RSTPPARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQ 68
Query: 360 LQVQMMSMGCGVVPMMFPGVQQYM 383
LQ+QM+ MG G+ P++ +QQYM
Sbjct: 69 LQLQMLVMGKGMSPVVPLELQQYM 92
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 68/82 (82%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
ES D KK TS+KRSRAAEVHNLSERRRRDRINEKM+ALQELIP NK+DKASMLDE
Sbjct: 2 ESVDVKKAPPARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDE 61
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
AIEYLK LQLQ+Q++S G V
Sbjct: 62 AIEYLKMLQLQLQVLSPGSSKV 83
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Query: 304 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
S+KRSR+AEVHN+SE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQ
Sbjct: 191 SSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 250
Query: 364 MMSM--GCGVVPMMFPGVQQ--YMPNMGMGIGMG 393
M+SM G + PM PG+ Q +P MG+ +G
Sbjct: 251 MLSMRNGLSLQPMCLPGMLQPIQLPQMGLDYDVG 284
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 97/140 (69%), Gaps = 16/140 (11%)
Query: 271 DRKRKG-RETDDEYHSE-DVELESAD----AKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
DRKRK + D E S+ D+ L S D K S+ S S +RSRAAEVHNLSERRRRDR
Sbjct: 212 DRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDR 271
Query: 325 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--------PMMF 376
INE+M+ALQELIP C+++DKAS+LDEAI+YLKSLQ+Q+Q+M MG G+ PMMF
Sbjct: 272 INERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMF 331
Query: 377 PGVQQ--YMPNMGMGIGMGM 394
PGVQ Y+ M M M +
Sbjct: 332 PGVQSSPYINQMAMQSQMQL 351
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 97/140 (69%), Gaps = 16/140 (11%)
Query: 271 DRKRKG-RETDDEYHSE-DVELESAD----AKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
DRKRK + D E S+ D+ L S D K S+ S S +RSRAAEVHNLSERRRRDR
Sbjct: 212 DRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDR 271
Query: 325 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--------PMMF 376
INE+M+ALQELIP C+++DKAS+LDEAI+YLKSLQ+Q+Q+M MG G+ PMMF
Sbjct: 272 INERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMF 331
Query: 377 PGVQQ--YMPNMGMGIGMGM 394
PGVQ Y+ M M M +
Sbjct: 332 PGVQSSPYINQMAMQSQMQL 351
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 97/140 (69%), Gaps = 16/140 (11%)
Query: 271 DRKRKG-RETDDEYHSE-DVELESAD----AKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
DRKRK + D E S+ D+ L S D K S+ S S +RSRAAEVHNLSERRRRDR
Sbjct: 212 DRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDR 271
Query: 325 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--------PMMF 376
INE+M+ALQELIP C+++DKAS+LDEAI+YLKSLQ+Q+Q+M MG G+ PMMF
Sbjct: 272 INERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMF 331
Query: 377 PGVQQ--YMPNMGMGIGMGM 394
PGVQ Y+ M M M +
Sbjct: 332 PGVQSSPYINQMAMQSQMQL 351
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 98/173 (56%), Gaps = 16/173 (9%)
Query: 234 GGSSGARD-----LTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDV 288
G ++ RD L CEM + +S ++ + A D E D HS+D
Sbjct: 213 GSATFGRDSHHVTLDTCEMDLGVGFTSTSFGSQENTKTATAVD------ENDSVCHSDDD 266
Query: 289 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASML 348
+ + A+ K S S KRSRAA +HN SER+RRD+IN++M+ LQ+L+P +K+DKASML
Sbjct: 267 DKQKANGK----SSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASML 322
Query: 349 DEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGMGMGMGRAWI 401
DE IEYLK LQ QVQMMS + P+M P Q M M M MGMG A I
Sbjct: 323 DEVIEYLKQLQAQVQMMSR-MNIQPVMLPMTMQQQLQMSMLAPMNMGMGLAGI 374
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 110/201 (54%), Gaps = 20/201 (9%)
Query: 182 TVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARD 241
TV S+ P P D SEA G G++ + +TS A A + +
Sbjct: 221 TVERSTKLPTPAVDEH-SEAAGHNCGVLGIHRSQGQTSTSEALRAKAKAYNNN------N 273
Query: 242 LTMCE--MTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQS 299
+ MC + +SS AS +P RK +TDD + D + E D KQ
Sbjct: 274 INMCHEPLLASSSVCSLGASNDPNLGF-------RKHEDTDDSTYLSDNDGEPEDMVKQD 326
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R KRSR EVHNLSE++RR++IN+KMR L++LIP CNK DKASMLD+AI+YLK+L+
Sbjct: 327 REGNRVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLK 386
Query: 360 LQV----QMMSMGCGVVPMMF 376
LQ+ Q+MSMG G+ P+M
Sbjct: 387 LQLQANFQIMSMGSGLWPLMM 407
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 87/129 (67%), Gaps = 8/129 (6%)
Query: 281 DEYHSEDVE-LESADAKKQSRGSTS---AKRSRAAEVHNLSERRRRDRINEKMRALQELI 336
+EY E E LE + ++ +TS +KRSRAAEVHNLSE+RRR RINEKM+ALQ LI
Sbjct: 114 NEYDCESEEGLEGLILEAPAKPTTSRNPSKRSRAAEVHNLSEKRRRSRINEKMKALQNLI 173
Query: 337 PRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMFPGVQQYMPNMGMGIGMGM 394
P NK+DKASMLDEAIEYLK LQLQVQM++M G + P+ PGV Q PN + MG
Sbjct: 174 PNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGVSLYPVCLPGVLQ--PNEISHMRMGY 231
Query: 395 GMGRAWIWE 403
G + E
Sbjct: 232 HEGNRSLNE 240
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 96/163 (58%), Gaps = 17/163 (10%)
Query: 243 TMCEMTVTSSPGGSSASAEPPAQKPAAEDR---KRKGRETDDEYHSEDVELESADAKKQS 299
T C + T+ +S + PP+ K D G E DE + K ++
Sbjct: 187 TFCRESDTTMMTWASFESPPPSLKAKTTDEDSASHGGSENQDE---------DRETKTET 237
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
S S++R+RAA VHN SERRRRDRIN+KM+ALQ+L+P +K+DKASMLDE IEYLK LQ
Sbjct: 238 VRSHSSRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQ 297
Query: 360 LQVQMMSMGCGVVPMMFPGVQQ-----YMPNMGMGIGMGMGMG 397
QVQ MS+ MM G+QQ + MGMG+ +GMGMG
Sbjct: 298 AQVQAMSVRNMPQMMMPLGMQQQLQMSLLARMGMGVSLGMGMG 340
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 70/84 (83%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R + +RSR+AE HN SERRRRD+INEK++ALQEL+P CNK+DK SMLDEAI+YLKSLQ
Sbjct: 9 RSTPPTRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQ 68
Query: 360 LQVQMMSMGCGVVPMMFPGVQQYM 383
LQ+QM+ MG G+ P++ +QQYM
Sbjct: 69 LQLQMLVMGKGMSPVVPLELQQYM 92
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 91/134 (67%), Gaps = 16/134 (11%)
Query: 280 DDEYHSEDVELESADAKKQ-SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPR 338
D E S+ + +S + KQ S G++S+KRSRAAEVHNLSE+RRR+RINEKM+ALQ LIP
Sbjct: 126 DIECQSQKAQEDSGENFKQCSTGTSSSKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPN 185
Query: 339 CNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV-VPMM-----FPGVQ-QYMP------- 384
NK+DKASMLDEAIEYLK LQLQVQM+S G+ + M P +Q Q MP
Sbjct: 186 SNKTDKASMLDEAIEYLKKLQLQVQMLSARSGIDISSMRWLAQMPHLQIQQMPKACMTTD 245
Query: 385 -NMGMGIGMGMGMG 397
+ G+ I M +G G
Sbjct: 246 QHAGVSISMPVGSG 259
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 84/111 (75%), Gaps = 6/111 (5%)
Query: 271 DRKRKGRETDD--EYHSEDV-ELESADAKKQSRGST-SAKRSRAAEVHNLSERRRRDRIN 326
D KR+ RE DD +Y +E+ E ES + + +G + KRSR++EVHNLSERRRRDRIN
Sbjct: 178 DPKRRRREEDDGVDYQTEENGEGESTNRRHAGKGRLMNKKRSRSSEVHNLSERRRRDRIN 237
Query: 327 EKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMF 376
EKMRALQEL+P CNK DKASML+E IEYLKSLQ+QVQ MSMG + PMM
Sbjct: 238 EKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQAMSMGY-MRPMML 287
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
A A + RG + +KRSRAAEVHNLSE+RRR +INEKM+ALQ LIP NK+DKASMLDEAI
Sbjct: 10 AAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAI 69
Query: 353 EYLKSLQLQVQMMSMGCGV 371
EYLK LQLQVQM+SM GV
Sbjct: 70 EYLKQLQLQVQMLSMRNGV 88
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Query: 294 DAKKQSRGSTSA--KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEA 351
D R ST A +RSR+A+ HN SERRRRDRINEK+RALQEL+P C K+DK SMLDEA
Sbjct: 3 DGSSAPRRSTPAPTRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEA 62
Query: 352 IEYLKSLQLQVQMMSM--GCGVVPMMFPGVQQYM 383
I+YLKSLQLQ+QM+ M G G+ P++ P +QQYM
Sbjct: 63 IDYLKSLQLQLQMLVMGKGGGMAPVVPPELQQYM 96
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 70/86 (81%), Gaps = 2/86 (2%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R + +RSR+A+ HN SERRRRDRINEK+RALQEL+P C K+DK SMLDEAI+YLKSLQ
Sbjct: 10 RATPPTRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQ 69
Query: 360 LQVQMMSM--GCGVVPMMFPGVQQYM 383
LQ+QM+ M G G+ P++ P +QQYM
Sbjct: 70 LQLQMLVMGKGGGMAPVVPPELQQYM 95
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 86/117 (73%), Gaps = 6/117 (5%)
Query: 273 KRKGRETDDEYH-SEDVELE--SADAKKQSRG-STSAKRSRAAEVHNLSERRRRDRINEK 328
K K +E+++ H S+ E E A+ +RG S +KR+R+AE H+LSE+RRRDRIN+K
Sbjct: 343 KSKCQESEESEHPSQSFEEEPRRAEGAMSTRGGSAGSKRNRSAEGHSLSEKRRRDRINKK 402
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYM 383
MR+LQELIP C K DK S+LDEAI+YLK+LQLQVQ+MSMG G+ P+M P V Q +
Sbjct: 403 MRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVMSMGAGMCMAPVMIPAVLQQI 459
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
RG + +KR+RAAEVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQ
Sbjct: 97 RGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 156
Query: 360 LQVQMMSMGCGVV--PMMFPGVQQYMPNMGMGIGMGMG 395
LQVQM+SM GV P G + M M +G+G
Sbjct: 157 LQVQMLSMRNGVYLNPSYLSGALEPMQASQMFAALGVG 194
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
GS +KR+R+AE H+LSE+RRRDRIN+KMR+LQELIP C K DK S+LDEAI+YLK+LQL
Sbjct: 6 GSAGSKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQL 65
Query: 361 QVQMMSMGCGVV--PMMFPGVQQYM 383
QVQ+MSMG G+ P+M P V Q +
Sbjct: 66 QVQVMSMGAGMCMAPVMIPAVLQQI 90
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
A A + RG + +KRSRAAEVHNLSE+RRR +INEKM+ALQ LIP NK+DKASMLDEAI
Sbjct: 87 AAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAI 146
Query: 353 EYLKSLQLQVQMMSMGCGV 371
EYLK LQLQVQM+SM GV
Sbjct: 147 EYLKQLQLQVQMLSMRNGV 165
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
A A + RG + +KRSRAAEVHNLSE+RRR +INEKM+ALQ LIP NK+DKASMLDEAI
Sbjct: 87 AAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAI 146
Query: 353 EYLKSLQLQVQMMSMGCGV 371
EYLK LQLQVQM+SM GV
Sbjct: 147 EYLKQLQLQVQMLSMRNGV 165
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 86/129 (66%), Gaps = 10/129 (7%)
Query: 273 KRKGRETDDE---YHSEDVELESADAKKQSRGSTS---AKRSRAAEVHNLSERRRRDRIN 326
KRK + ++E Y S + + ES DAK Q KR R+ EVH L ER+RRD N
Sbjct: 184 KRKHGDIEEEESTYLSNNPDDESDDAKTQVHARIRKPVTKRKRSTEVHKLYERKRRDEFN 243
Query: 327 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYMP 384
+KMRALQ+++P C K DKAS+LDEA++Y+++LQ QVQMMSMG G++ PMM P + P
Sbjct: 244 KKMRALQDILPNCYKDDKASLLDEAVKYMRTLQHQVQMMSMGNGLIRPPMMLP--MGHYP 301
Query: 385 NMGMGIGMG 393
MG+G+ +G
Sbjct: 302 PMGLGMHVG 310
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
E+AD +++ STS K+ R +VH+LSER+RRD+IN+KMRALQ LIP +K DKASMLD+
Sbjct: 362 ENADEEEEIPKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDK 421
Query: 351 AIEYLKSLQLQVQMMSM--GCGVVPMMFP-GVQQ----YMPNMGMGIGMGMGM 396
AIEYLK+LQLQ+QMMSM C + PMM P +QQ Y+ + +GM M M
Sbjct: 422 AIEYLKTLQLQLQMMSMRGSCYMPPMMIPTALQQIQAPYLSHFSPMMGMRMPM 474
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 63/73 (86%)
Query: 311 AEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCG 370
AE HN SERRRRDRINEK++ALQEL+P C K+DK SMLDEAI+YLKSLQLQ+QM+ MG G
Sbjct: 15 AEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKG 74
Query: 371 VVPMMFPGVQQYM 383
+ P++ P +QQYM
Sbjct: 75 MAPVVPPELQQYM 87
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 68/85 (80%), Gaps = 7/85 (8%)
Query: 289 ELESADAKK--QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS 346
E ES D KK RGST AKRSRAAEVHN SERRRRDRINEKMRALQELIP NK+DKAS
Sbjct: 2 EDESVDTKKPVTGRGST-AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKAS 60
Query: 347 MLDEAIEYLKSLQLQVQMMSMGCGV 371
MLDEAIEYLK LQLQ+Q+ C V
Sbjct: 61 MLDEAIEYLKMLQLQLQV----CAV 81
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 65/88 (73%), Gaps = 4/88 (4%)
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM-- 367
AAEVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM++M
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 247
Query: 368 GCGVVPMMFPGVQQ--YMPNMGMGIGMG 393
G + P+ PG Q +P G G G
Sbjct: 248 GLSLHPIYLPGALQPTQLPQTGAGFAEG 275
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/107 (65%), Positives = 81/107 (75%), Gaps = 5/107 (4%)
Query: 281 DEYHSEDVE-LESA--DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIP 337
DEY E E LE+ +A +S G +S+KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP
Sbjct: 113 DEYDCESEEGLEALVEEAAVKSGGRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIP 172
Query: 338 RCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMFPGVQQY 382
NK+DKASMLDEAIEYLK LQLQVQM+SM G + PM PG Q+
Sbjct: 173 NSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGMSLHPMCLPGASQF 219
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 312 EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GC 369
EVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM++M G
Sbjct: 126 EVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGL 185
Query: 370 GVVPMMFPGVQQYM--PNMGMGIGMGMGM 396
+ PM PG Q M P GM G+G+
Sbjct: 186 SLHPMCLPGALQPMQLPLSGMSFDEGIGL 214
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 61/73 (83%)
Query: 311 AEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCG 370
E HN SERRRRDRINEK++ALQEL+P C K+DK SMLDEAI+YLKSLQ+Q+QM+ MG G
Sbjct: 19 VEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQMLVMGKG 78
Query: 371 VVPMMFPGVQQYM 383
P++ P +QQYM
Sbjct: 79 TAPVVPPELQQYM 91
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 66/78 (84%), Gaps = 3/78 (3%)
Query: 289 ELESADAKK--QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS 346
E ES D KK RGST AKRSRAAEVHN SERRRRDRINEKMRALQELIP NK+DKAS
Sbjct: 2 EDESIDTKKPVTGRGST-AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKAS 60
Query: 347 MLDEAIEYLKSLQLQVQM 364
ML+EAIEYLK LQLQ+Q+
Sbjct: 61 MLEEAIEYLKMLQLQLQV 78
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/66 (81%), Positives = 59/66 (89%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSE+RRR +INEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 161
Query: 366 SMGCGV 371
SM GV
Sbjct: 162 SMRNGV 167
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP +K+DKASMLD+AIEYLK LQLQVQM+
Sbjct: 51 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 110
Query: 366 SM--GCGVVPMMFPGVQQYMPNMGMGIGMGMGMGRA 399
SM G V P+ G +++P M + +A
Sbjct: 111 SMRNGLYVPPVNLSGAPEHLPIPQMSAALDQNSAKA 146
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 63/74 (85%), Gaps = 3/74 (4%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
ES D KK +T KRSRAAEVHNLSERRRRDRINEKMRALQELIP NK+DKASMLDE
Sbjct: 2 ESVDTKK---PATRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKTDKASMLDE 58
Query: 351 AIEYLKSLQLQVQM 364
AIEYLK LQLQ+Q+
Sbjct: 59 AIEYLKMLQLQLQV 72
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 59/67 (88%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KR+RAAEVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM+
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 218
Query: 366 SMGCGVV 372
SM GV
Sbjct: 219 SMRNGVY 225
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP +K+DKASMLD+AIEYLK LQLQVQM+
Sbjct: 29 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 88
Query: 366 SMGCGVV--PMMFPGVQQYMPNMGMGIGMGMGMGRA 399
SM G+ P+ G +++P M + +A
Sbjct: 89 SMRNGLYLPPVNLSGAPEHLPIPQMSAALDQNSAKA 124
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP +K+DKASMLD+AIEYLK LQLQVQM+
Sbjct: 51 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 110
Query: 366 SMGCGVV--PMMFPGVQQYMPNMGMGIGMGMGMGRA 399
SM G+ P+ G +++P M + +A
Sbjct: 111 SMRNGLYLPPVNLSGAPEHLPIPQMSAALDQNSAKA 146
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
Query: 273 KRKGRETDDEYHSE-DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
K K + D H E + + E D K+ + S SA+RSRAA +HN SERRRRDRINEKM+A
Sbjct: 224 KTKSIDEDSACHVESENQEEEQDTKRVANRSHSARRSRAAAIHNQSERRRRDRINEKMKA 283
Query: 332 LQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYM 383
LQ+L+P +K+DKASMLDE IEYLK LQ QVQ MS+ +M G+QQ +
Sbjct: 284 LQKLVPNASKTDKASMLDEVIEYLKQLQAQVQFMSVRSMQQMIMPIGMQQQL 335
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Query: 286 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 345
E EL S+ A R +S+KRSRAAE HNLSE+RRR +INEK++ALQ LIP NK+DKA
Sbjct: 70 EGSELPSSKAAPPPR--SSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKA 127
Query: 346 SMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMFPG 378
SMLDEAIEYLK LQLQVQM+ + G + PM G
Sbjct: 128 SMLDEAIEYLKQLQLQVQMLMVRNGYSLHPMSLSG 162
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Query: 309 RAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM- 367
RAAEVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM++M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMR 256
Query: 368 -GCGVVPMMFPG 378
G + P+ PG
Sbjct: 257 NGINLHPLCLPG 268
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Query: 309 RAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM- 367
RAAEVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM++M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMR 256
Query: 368 -GCGVVPMMFPG 378
G + P+ PG
Sbjct: 257 NGINLHPLCLPG 268
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 283 YHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS 342
Y SED L S+++ KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP +K+
Sbjct: 21 YESEDA-LGSSESDPARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKT 79
Query: 343 DKASMLDEAIEYLKSLQLQVQMMSMGCGV 371
DKASMLD+AIEYLK LQLQVQM+SM G+
Sbjct: 80 DKASMLDDAIEYLKQLQLQVQMLSMRNGL 108
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 57/69 (82%)
Query: 325 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMP 384
I EKMRALQELIP CNK+DKAS+LDE IEYLKSLQ+QVQ+M M G+VPM+FPG QYMP
Sbjct: 205 IKEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSGMVPMVFPGAHQYMP 264
Query: 385 NMGMGIGMG 393
M +G+ G
Sbjct: 265 PMALGMNSG 273
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
E +A Q T RS A H +S +RRRDRINEK++ALQEL+P C K+DK SMLDE
Sbjct: 123 EGKEAASQEEEQTPKLRSVIA--HLVSRKRRRDRINEKLKALQELLPNCTKTDKVSMLDE 180
Query: 351 AIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYM 383
AI+YLKSLQLQ+QM+ MG G+ P++ P +QQYM
Sbjct: 181 AIDYLKSLQLQLQMLVMGKGMAPVVPPELQQYM 213
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
Query: 309 RAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 368
RAAEVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM++M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMR 235
Query: 369 CGV---VPMMFPG 378
G+ P+ PG
Sbjct: 236 NGINLHHPLCLPG 248
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
Query: 312 EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GC 369
EVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM+SM G
Sbjct: 143 EVHNLSEKRRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGL 202
Query: 370 GVVPMMFP-GVQQY-MPNMGMGI 390
+ PM FP G+Q + MGM +
Sbjct: 203 SLHPMCFPEGLQPLQLSQMGMEL 225
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 5/100 (5%)
Query: 274 RKGRE-TDDEYHSEDVELESAD---AKKQSRGSTSAKRS-RAAEVHNLSERRRRDRINEK 328
RK E TDD + D + E+ + +K R KRS R A+VHNLSER+RRD+INEK
Sbjct: 168 RKSHEDTDDSPYLSDNDEETQENIVKEKPVRERNRVKRSYRNAKVHNLSERKRRDKINEK 227
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 368
+RAL+ELIP CNK DKASMLD+AI+YLK+L+LQ+Q+MSMG
Sbjct: 228 IRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMG 267
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 5/100 (5%)
Query: 274 RKGRE-TDDEYHSEDVELESAD---AKKQSRGSTSAKRS-RAAEVHNLSERRRRDRINEK 328
RK E TDD + D + E+ + +K R KRS R A+VHNLSER+RRD+INEK
Sbjct: 168 RKSHEDTDDSPYLSDNDEETQENIVKEKPVREGNRVKRSYRNAKVHNLSERKRRDKINEK 227
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 368
+RAL+ELIP CNK DKASMLD+AI+YLK+L+LQ+Q+MSMG
Sbjct: 228 IRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMG 267
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
Query: 312 EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GC 369
EVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM+SM G
Sbjct: 147 EVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGL 206
Query: 370 GVVPMMFP-GVQQY-MPNMGMGI 390
+ PM FP G+Q + MGM +
Sbjct: 207 SLHPMCFPDGLQPLQLSQMGMEL 229
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 70/94 (74%), Gaps = 17/94 (18%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
+++RGSTS KRSRAAE+HNL+ERRRR++INE+M+ LQ+LIPRCNKS K SML++ IEY+K
Sbjct: 138 EEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVK 197
Query: 357 SLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 390
SL++Q + Q+MP+M MG+
Sbjct: 198 SLEMQ-----------------INQFMPHMAMGM 214
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 10 RAEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQ 69
R E+D++ELL + G + + + + + S +++ P P H +LF+Q
Sbjct: 21 RGEDDIVELLCKIGQTQIPSSDPLPILRGSGSGGREENTPLPPPLPH-------QNLFIQ 73
Query: 70 EDEMASWLHYPLNDTNFDSDFCTDLLY---PAP 99
EDEM+SW H+PL D+ LY PAP
Sbjct: 74 EDEMSSWPHHPLRQ-----DYLCSELYASTPAP 101
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
G KR+RAAEVHNLSE+RRR +INEKM+ALQ L+P +K+DKASMLD+AIEYLK LQL
Sbjct: 42 GRPRGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKTDKASMLDDAIEYLKHLQL 101
Query: 361 QVQMMSMGCGVV--PMMFPGVQQYMPNMGM 388
QVQM+SM GV + PG +++P M
Sbjct: 102 QVQMLSMRNGVYRPSVNLPGPPEHLPTSQM 131
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 56/63 (88%)
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 362
+S+KRSRAAE HNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQV
Sbjct: 119 SSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQV 178
Query: 363 QMM 365
Q +
Sbjct: 179 QYL 181
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 59/66 (89%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP +K+DKASMLD+AIEYLK LQLQVQM+
Sbjct: 42 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQML 101
Query: 366 SMGCGV 371
SM G+
Sbjct: 102 SMRNGL 107
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 59/66 (89%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP +K+DKASMLD+AIEYLK LQLQVQM+
Sbjct: 44 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQML 103
Query: 366 SMGCGV 371
SM G+
Sbjct: 104 SMRNGL 109
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 59/66 (89%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP +K+DKASMLD+AIEYLK LQLQVQM+
Sbjct: 42 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQML 101
Query: 366 SMGCGV 371
SM G+
Sbjct: 102 SMRNGL 107
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 107 bits (266), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/59 (91%), Positives = 56/59 (94%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
KR RAAEVHNLSERRRRDRINEKMRALQELIP CNK DKASMLDEAIEYLK+LQLQVQ+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQV 59
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 57/67 (85%), Gaps = 2/67 (2%)
Query: 319 RRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMF 376
+RRRDRINEKMRALQELIP CNK DKASMLDEAIEYLK+LQLQVQMMSMG G+ PM+
Sbjct: 10 QRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGSGLCIPPMLL 69
Query: 377 PGVQQYM 383
P Q++
Sbjct: 70 PPAMQHL 76
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 73/103 (70%), Gaps = 7/103 (6%)
Query: 281 DEYHSEDVE-----LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQEL 335
DEY E E +E K +S+KRSRAAEVHNLSE+RRR RINEKM+ALQ L
Sbjct: 78 DEYDCESEEGVEALIEEVPTKSVGASRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNL 137
Query: 336 IPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMF 376
IP NK+DKASMLDEAIEYLK LQLQVQM+S+ G + PM F
Sbjct: 138 IPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNGLSLHPMYF 180
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 70/93 (75%), Gaps = 2/93 (2%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
E+A ++++ + +RS A+ HNLSE+RRR +INEKM+ALQ+LIP NK+DKASMLDE
Sbjct: 86 ENALGNQRNKAVRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDE 145
Query: 351 AIEYLKSLQLQVQMMSM--GCGVVPMMFPGVQQ 381
AIEYLK LQLQVQ +++ G G+ PM P V Q
Sbjct: 146 AIEYLKQLQLQVQALAVMNGLGLNPMRLPPVMQ 178
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 287 DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS 346
D E E +K +R T KRSR A+VHNL ER+RRD+IN++MR L+ELIP CNK+DKAS
Sbjct: 729 DEEPEDVVKEKPAREGTGVKRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNKTDKAS 788
Query: 347 MLDEAIEYLKSLQLQVQM--MSMGCGVVPMMFPGVQQ 381
MLD+AIEYLK+L+LQ+Q+ S + + P V+Q
Sbjct: 789 MLDDAIEYLKTLKLQIQVNFKSFSSYQIAFVRPCVRQ 825
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Query: 304 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
S KRS A+ HNLSE++RR +INEKM+ALQ+LIP NK+DKASMLDEAIEYLK LQLQVQ
Sbjct: 88 SLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 147
Query: 364 MMSM--GCGVVPMMFPGV 379
+++ G G+ PM P V
Sbjct: 148 TLAVMNGLGLNPMRLPQV 165
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 55/62 (88%)
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGC 369
AAEVHNLSE+RRR +INEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM+SM
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 143
Query: 370 GV 371
GV
Sbjct: 144 GV 145
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R S KR+ A+ HNLSE+RRR +INEKM+ALQ+LIP NK+DKASMLDEAIEYLK LQ
Sbjct: 83 RQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ 142
Query: 360 LQVQMMSM--GCGVVPMMFPGV 379
LQVQ +++ G G+ PM P V
Sbjct: 143 LQVQTLAVMNGLGLNPMQLPPV 164
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 75/105 (71%), Gaps = 4/105 (3%)
Query: 267 PAAED-RKRKGRETDDE---YHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRR 322
P++E R K + TD++ + + + E + K Q+ S S +RSRAA +HN SERRRR
Sbjct: 139 PSSESPRSLKAKTTDEDSACHGGSENQDEDRETKTQTGRSHSTRRSRAAAIHNQSERRRR 198
Query: 323 DRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
DRIN+KM+ LQ+L+P +K+DKASMLDE IEYLK LQ QVQMMS+
Sbjct: 199 DRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSV 243
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 75/105 (71%), Gaps = 4/105 (3%)
Query: 267 PAAED-RKRKGRETDDE---YHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRR 322
P++E R K + TD++ + + + E + K Q+ S S +RSRAA +HN SERRRR
Sbjct: 177 PSSESPRSLKAKTTDEDSACHGGSENQDEDRETKTQTGRSHSTRRSRAAAIHNQSERRRR 236
Query: 323 DRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
DRIN+KM+ LQ+L+P +K+DKASMLDE IEYLK LQ QVQMMS+
Sbjct: 237 DRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSV 281
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Query: 304 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
S KR+ A+ HNLSE+RRR +INEKM+ALQ+LIP NK+DKASMLDEAIEYLK LQLQVQ
Sbjct: 84 SLKRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 143
Query: 364 MMSM--GCGVVPMMFPGV 379
+++ G G+ PM P V
Sbjct: 144 TLAVMNGLGLNPMRLPPV 161
>gi|357441955|ref|XP_003591255.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480303|gb|AES61506.1| Transcription factor PIF3 [Medicago truncatula]
Length = 555
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 84/138 (60%), Gaps = 10/138 (7%)
Query: 232 GGGGSSG--ARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD-EYHSEDV 288
G G+ G A D M E+ V SS S A+ + P D KRK R+T+D E HSEDV
Sbjct: 388 GDNGAKGHAAADKGM-EVAVASSSVCSGNGADRGSDDPN-RDLKRKSRDTEDSECHSEDV 445
Query: 289 ELESADAKKQS--RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS 346
E ES KK + RG +KRSRAAEVHNLSERRRRDRINEKMRALQELIP CN K S
Sbjct: 446 EDESVGVKKGAAGRGVAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCN---KVS 502
Query: 347 MLDEAIEYLKSLQLQVQM 364
L+ L+ +++
Sbjct: 503 FFPSDFALLRYLKNCIKL 520
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Query: 304 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
S KR+ A+ HNLSE++RR +INEKM+ALQ+LIP NK+DKASMLDEAIEYLK LQLQVQ
Sbjct: 88 SLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 147
Query: 364 MMSM--GCGVVPMMFPGV 379
+++ G G+ PM P V
Sbjct: 148 TLAVMNGLGLNPMRLPQV 165
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Query: 304 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
S KR+ A+ HNLSE++RR +INEKM+ALQ+LIP NK+DKASMLDEAIEYLK LQLQVQ
Sbjct: 88 SLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 147
Query: 364 MMSM--GCGVVPMMFPGV 379
+++ G G+ PM P V
Sbjct: 148 TLAVMNGLGLNPMRLPQV 165
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 57/61 (93%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
+KRSRAAEVHNLSER+RRDRINE+M+ALQELIP NK+DKASMLDEAIEYLK LQ Q+Q+
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQV 63
Query: 365 M 365
+
Sbjct: 64 V 64
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 55/60 (91%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP +K+DKASMLD+AIEYLK LQLQVQM+
Sbjct: 29 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMI 88
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R S KR+ A+ HNLSE+RRR +INEKM+ALQ+LIP NK+DKASMLDEAIEY+K LQ
Sbjct: 83 RQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQLQ 142
Query: 360 LQVQMMSM--GCGVVPMMF 376
LQVQ +++ G G+ PM
Sbjct: 143 LQVQTLAVMNGLGLNPMQL 161
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 57/61 (93%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
+KRSRAAEVHNLSER+RRDRINE+M+ALQELIP NK+DKASMLDEAIEYLK LQ Q+Q+
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQV 63
Query: 365 M 365
+
Sbjct: 64 V 64
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 58/64 (90%)
Query: 304 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
S+KR+RAAEVHNLSE+RRR RINEKM+ALQ LIP +K+DKASMLDEAIEYLK LQLQVQ
Sbjct: 133 SSKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQLQVQ 192
Query: 364 MMSM 367
+S+
Sbjct: 193 GLSV 196
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 77/134 (57%), Gaps = 22/134 (16%)
Query: 280 DDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
D HS + + K + S S KRSRAA +HN SER+RRD+IN++M+ LQ+L+P
Sbjct: 186 DSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNS 245
Query: 340 NKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPN-------------- 385
+K+DKASMLDE IEYLK LQ QV MMS M P + M
Sbjct: 246 SKTDKASMLDEVIEYLKQLQAQVSMMSR------MNMPSMMLPMAMQQQQQQLQMSLMSN 299
Query: 386 -MGMGIGMGM-GMG 397
MG+GIGMGM G+G
Sbjct: 300 PMGLGIGMGMPGLG 313
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 278 ETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIP 337
E D H+ D E + + S S KRSRAA +HN SER+RRD+IN++M+ LQ+L+P
Sbjct: 242 EHDSVSHNGD---EEKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVP 298
Query: 338 RCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFP 377
+K+DKASMLDE IEYLK LQ QVQMM+ + MM P
Sbjct: 299 NSSKTDKASMLDEVIEYLKQLQAQVQMMNR-INMSSMMLP 337
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 280 DDEYHSEDVELESADAKKQ---SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELI 336
D HS+ V + + KK+ + S S KRSRAA +HN SER+RRD+IN++M+ LQ+L+
Sbjct: 238 DSVSHSKPVGEDQDEGKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLV 297
Query: 337 PRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFP 377
P +KSDKASMLDE IEYLK LQ Q+QM++ + MM P
Sbjct: 298 PNSSKSDKASMLDEVIEYLKQLQAQLQMINR-INMSSMMLP 337
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 56/68 (82%)
Query: 296 KKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYL 355
K+ ++ S S KRSRAA +HN SER+RRD+IN++M+ LQ+L+P NK+DKASMLDE IEYL
Sbjct: 280 KENAKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYL 339
Query: 356 KSLQLQVQ 363
K LQ QVQ
Sbjct: 340 KQLQAQVQ 347
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 61/87 (70%)
Query: 280 DDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
D HS + + K + S S KRSRAA +HN SER+RRD+IN++M+ LQ+L+P
Sbjct: 184 DSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNS 243
Query: 340 NKSDKASMLDEAIEYLKSLQLQVQMMS 366
+K+DKASMLDE IEYLK LQ QV MMS
Sbjct: 244 SKTDKASMLDEVIEYLKQLQAQVSMMS 270
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 56/68 (82%)
Query: 296 KKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYL 355
K+ ++ S S KRSRAA +HN SER+RRD+IN++M+ LQ+L+P NK+DKASMLDE IEYL
Sbjct: 280 KENAKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYL 339
Query: 356 KSLQLQVQ 363
K LQ QVQ
Sbjct: 340 KQLQAQVQ 347
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 61/87 (70%)
Query: 280 DDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
D HS + + K + S S KRSRAA +HN SER+RRD+IN++M+ LQ+L+P
Sbjct: 184 DSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNS 243
Query: 340 NKSDKASMLDEAIEYLKSLQLQVQMMS 366
+K+DKASMLDE IEYLK LQ QV MMS
Sbjct: 244 SKTDKASMLDEVIEYLKQLQAQVSMMS 270
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 10/80 (12%)
Query: 312 EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV 371
EVHNLSE+RRR RINEKM+ALQ L+P +K+DKASMLD+AIEYLK LQLQVQM+SM G+
Sbjct: 68 EVHNLSEKRRRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRNGL 127
Query: 372 VPMMFPGVQQYMPNMGMGIG 391
Y+P + + +G
Sbjct: 128 ----------YLPQVNLPVG 137
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 54/65 (83%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R S S KRSRAA +HN SER+RRDRIN+KM+ LQ+L+P +K+DKASMLDE I+YLK LQ
Sbjct: 266 RSSISTKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQ 325
Query: 360 LQVQM 364
QVQ+
Sbjct: 326 AQVQV 330
>gi|225898737|dbj|BAH30499.1| hypothetical protein [Arabidopsis thaliana]
Length = 363
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
KR R AE +N ER +R+ IN+KMR LQ L+P +K D SMLDEAI Y+ +LQLQVQM
Sbjct: 184 VKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQM 243
Query: 365 MSMGCGVV--PMMFPGVQQYMPNMGMGIGMGMGMGRAWIW 402
M+MG V MM P Y MG+ +G+GM MG
Sbjct: 244 MTMGNRFVTPSMMMPLGPNY-SQMGLAMGVGMQMGEQQFL 282
>gi|297817562|ref|XP_002876664.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
gi|297322502|gb|EFH52923.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
KR R AE +N ER++R +N+KMR LQ+L+P ++ D SMLDEAI Y+K+LQLQVQM
Sbjct: 172 VKRKRNAEAYNSPERKQRRDVNKKMRTLQDLLPNSHEDDNESMLDEAINYMKNLQLQVQM 231
Query: 365 MSMGCGVV--PMMFPGVQQYMPNMGMGIGMGMGMG 397
M+MG V MM P Y M + +GMGM MG
Sbjct: 232 MTMGNRFVTPSMMLPLGLHY-SQMDLAMGMGMQMG 265
>gi|223702404|gb|ACN21633.1| putative basic helix-loop-helix protein BHLH9 [Lotus japonicus]
Length = 165
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 308 SRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
+RAAEV NLS +RRR RINE M+ALQ LIP NK+DKA MLDEAI+YLK LQLQVQM+S+
Sbjct: 74 TRAAEVLNLSGKRRRSRINENMKALQNLIPNSNKTDKAFMLDEAIDYLKQLQLQVQMLSL 133
Query: 368 --GCGVVPMMFPGVQQY 382
G + P+ + ++
Sbjct: 134 RNGLSLHPICLKFLYKF 150
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R S S KRSRAA +HN SER+RRDRIN+KM+ LQ+L+P +K+DKASMLDE IE+LK LQ
Sbjct: 251 RSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIEHLKQLQ 310
Query: 360 LQVQ 363
QVQ
Sbjct: 311 AQVQ 314
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R S S KRSRAA +HN SER+RRDRIN+KM+ LQ+L+P +K+DKASMLDE IE+LK LQ
Sbjct: 251 RSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIEHLKQLQ 310
Query: 360 LQVQ 363
QVQ
Sbjct: 311 AQVQ 314
>gi|42566136|ref|NP_191768.2| transcription factor PIF6 [Arabidopsis thaliana]
gi|193211499|gb|ACF16169.1| At3g62090 [Arabidopsis thaliana]
gi|332646785|gb|AEE80306.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 346
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
KR R AE +N ER +R+ IN+KMR LQ L+P +K D SMLDEAI Y+ +LQLQVQM
Sbjct: 167 VKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQM 226
Query: 365 MSMGCGVV--PMMFPGVQQYMPNMGMGIGMGMGMGRAWIW 402
M+MG V MM P Y MG+ +G+GM MG
Sbjct: 227 MTMGNRFVTPSMMMPLGPNY-SQMGLAMGVGMQMGEQQFL 265
>gi|145332927|ref|NP_001078329.1| transcription factor PIF6 [Arabidopsis thaliana]
gi|75301050|sp|Q8L5W7.1|PIF6_ARATH RecName: Full=Transcription factor PIF6; AltName: Full=Basic
helix-loop-helix protein 132; Short=AtbHLH132;
Short=bHLH 132; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 2; AltName: Full=Protein
PHYTOCHROME-INTERACTING FACTOR 6; AltName:
Full=Transcription factor EN 111; AltName: Full=bHLH
transcription factor bHLH132
gi|22535494|dbj|BAC10690.1| PIF3 like basic Helix Loop Helix protein 2 [Arabidopsis thaliana]
gi|332646786|gb|AEE80307.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 363
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
KR R AE +N ER +R+ IN+KMR LQ L+P +K D SMLDEAI Y+ +LQLQVQM
Sbjct: 184 VKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQM 243
Query: 365 MSMGCGVV--PMMFPGVQQYMPNMGMGIGMGMGMGRAWIW 402
M+MG V MM P Y MG+ +G+GM MG
Sbjct: 244 MTMGNRFVTPSMMMPLGPNY-SQMGLAMGVGMQMGEQQFL 282
>gi|297821098|ref|XP_002878432.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
gi|297324270|gb|EFH54691.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
KR R AE +N ER++R IN+KMR LQ+L+P +K D SMLDEAI Y+K+L+LQVQM
Sbjct: 151 VKRKRNAEANNSPERKQRRDINKKMRTLQDLLPNSHKDDNESMLDEAIIYMKNLKLQVQM 210
Query: 365 MSMGCGVV--PMMFPGVQQYMPNMGMGIGMGMGM 396
M+MG V MM P Y MG+ +GMGM M
Sbjct: 211 MTMGNRFVTPSMMLPLGLHY-SQMGLAMGMGMQM 243
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 57/70 (81%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
QSR A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K
Sbjct: 133 QSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKF 192
Query: 358 LQLQVQMMSM 367
LQLQV+++SM
Sbjct: 193 LQLQVKVLSM 202
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 57/70 (81%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
QSR A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K
Sbjct: 133 QSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKF 192
Query: 358 LQLQVQMMSM 367
LQLQV+++SM
Sbjct: 193 LQLQVKVLSM 202
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 57/70 (81%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
QSR A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K
Sbjct: 133 QSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKF 192
Query: 358 LQLQVQMMSM 367
LQLQV+++SM
Sbjct: 193 LQLQVKVLSM 202
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 286 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 345
E + + + + +K S++RS E HNL+E+RRR +INE+++ LQ+L+P C+KS++A
Sbjct: 169 EGMMMANKEMRKVPAAVGSSRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSKSNQA 228
Query: 346 SMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQ 380
S LD+ I Y+KSLQ QVQ MS+G P ++P VQ
Sbjct: 229 STLDQTIHYMKSLQQQVQAMSVGLA-APAVYPVVQ 262
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 4/76 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 34 ARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 93
Query: 365 MSM----GCGVVPMMF 376
+SM G G +P +
Sbjct: 94 LSMSRLGGAGALPSLV 109
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
K G S+ RS E H L+E+RRR +INE+++ LQ+L+P C+KS++AS LD+ I Y+K
Sbjct: 158 KAPAGGPSSWRSHHGEAHKLTEKRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMK 217
Query: 357 SLQLQVQMMSMGCGVVPMMFPGVQ-QYMPNMGMGIGM 392
SLQ QVQ MS+G P ++P VQ Q MP GM + M
Sbjct: 218 SLQQQVQAMSVGL-AAPAVYPIVQPQCMPP-GMPVAM 252
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRA-AEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
E A K R S S KR +A + VH SERRRRD+IN++M+ LQ+L+P +K+DKASMLD
Sbjct: 215 EDYKATKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRMKELQKLVPNSSKTDKASMLD 274
Query: 350 EAIEYLKSLQLQVQMMSMGCGVVPMMFP 377
E I+Y+K LQ QVQMM+ MM P
Sbjct: 275 EVIQYMKQLQAQVQMMNWMKMYTSMMLP 302
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 60/75 (80%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
A A+ Q++ A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I
Sbjct: 120 ATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEII 179
Query: 353 EYLKSLQLQVQMMSM 367
+Y+K LQLQV+++SM
Sbjct: 180 DYVKFLQLQVKVLSM 194
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 60/75 (80%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
A A+ Q++ A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I
Sbjct: 120 ATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEII 179
Query: 353 EYLKSLQLQVQMMSM 367
+Y+K LQLQV+++SM
Sbjct: 180 DYVKFLQLQVKVLSM 194
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 57/70 (81%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
QSR A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y++
Sbjct: 133 QSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVEF 192
Query: 358 LQLQVQMMSM 367
LQLQV+++SM
Sbjct: 193 LQLQVKVLSM 202
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 60/75 (80%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
A A+ Q++ A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I
Sbjct: 177 ATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEII 236
Query: 353 EYLKSLQLQVQMMSM 367
+Y+K LQLQV+++SM
Sbjct: 237 DYVKFLQLQVKVLSM 251
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 72/101 (71%), Gaps = 14/101 (13%)
Query: 277 RETDDEY---HSEDVELE-------SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRIN 326
+ + EY HS DVE + SA+AK ++R A+R +A + H+++ER RR++I+
Sbjct: 283 HDHNSEYPINHSSDVEPQANSAPGNSANAKPRTR----ARRGQATDPHSIAERLRREKIS 338
Query: 327 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
E+M+ LQ+L+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 339 ERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 379
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Query: 289 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASML 348
++ + + +K G +S RS E HNL+E+RRR +INE+++ LQ+L+P C+KS++AS L
Sbjct: 146 KMGTEEMRKAPAGGSS--RSHHGEAHNLTEKRRRHKINERLKTLQQLVPGCSKSNQASTL 203
Query: 349 DEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQ 380
D+ I Y+KSLQ QVQ MS+G P ++P VQ
Sbjct: 204 DQTIHYMKSLQHQVQAMSVGL-ASPAVYPVVQ 234
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
A Q R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y
Sbjct: 188 APAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 247
Query: 355 LKSLQLQVQMMSM----GCGVV 372
+K LQ+QV+++SM G G V
Sbjct: 248 VKFLQVQVKVLSMSRLGGAGAV 269
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 56/73 (76%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
A Q R A+R +A H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y
Sbjct: 252 APAQPRQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 311
Query: 355 LKSLQLQVQMMSM 367
+K LQLQV+++SM
Sbjct: 312 VKFLQLQVKVLSM 324
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
A Q R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y
Sbjct: 191 APAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 250
Query: 355 LKSLQLQVQMMSM----GCGVV 372
+K LQ+QV+++SM G G V
Sbjct: 251 VKFLQVQVKVLSMSRLGGAGAV 272
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
AKR +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 190 AKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 249
Query: 365 MSM----GCGVVPMMFPGV 379
+SM G V + G+
Sbjct: 250 LSMSRLGGATAVGTLVAGI 268
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
Q R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K
Sbjct: 220 QPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKF 279
Query: 358 LQLQVQMMSM 367
LQLQV+++SM
Sbjct: 280 LQLQVKVLSM 289
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
AKR +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 197 AKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 256
Query: 365 MSM 367
+SM
Sbjct: 257 LSM 259
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 57/73 (78%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
A Q R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y
Sbjct: 96 APAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 155
Query: 355 LKSLQLQVQMMSM 367
+K LQLQV+++SM
Sbjct: 156 VKFLQLQVKVLSM 168
>gi|326518931|dbj|BAJ92626.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R + S KRSRAA +HN SER+RRDRIN+KM+ LQ+L+P +K+DKASMLDE I++LK LQ
Sbjct: 253 RSAISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIDHLKQLQ 312
Query: 360 LQVQ 363
VQ
Sbjct: 313 ATVQ 316
>gi|326502778|dbj|BAJ99017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R + S KRSRAA +HN SER+RRDRIN+KM+ LQ+L+P +K+DKASMLDE I++LK LQ
Sbjct: 253 RSAISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIDHLKQLQ 312
Query: 360 LQVQ 363
VQ
Sbjct: 313 ATVQ 316
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 57/73 (78%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
A Q R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y
Sbjct: 248 APAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 307
Query: 355 LKSLQLQVQMMSM 367
+K LQLQV+++SM
Sbjct: 308 VKFLQLQVKVLSM 320
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 61/84 (72%), Gaps = 7/84 (8%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
KQ R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K
Sbjct: 243 KQQR--VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVK 300
Query: 357 SLQLQVQMMSM-----GCGVVPMM 375
LQLQV+++SM V P++
Sbjct: 301 FLQLQVKVLSMSRLGGAAAVAPLV 324
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 57/73 (78%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
A Q R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y
Sbjct: 29 APAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 88
Query: 355 LKSLQLQVQMMSM 367
+K LQLQV+++SM
Sbjct: 89 VKFLQLQVKVLSM 101
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 71/101 (70%), Gaps = 14/101 (13%)
Query: 277 RETDDEY---HSEDVELE-------SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRIN 326
+ + EY HS DVE + SA+AK ++R A+R +A + H+++ER RR++I+
Sbjct: 284 HDHNSEYPINHSSDVEPQANSAPGNSANAKPRTR----ARRGQATDPHSIAERLRREKIS 339
Query: 327 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
E+M+ LQ L+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 340 ERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 71/101 (70%), Gaps = 14/101 (13%)
Query: 277 RETDDEY---HSEDVELE-------SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRIN 326
+ + EY HS DVE + SA+AK ++R A+R +A + H+++ER RR++I+
Sbjct: 284 HDHNSEYPINHSSDVEPQANSAPGNSANAKPRTR----ARRGQATDPHSIAERLRREKIS 339
Query: 327 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
E+M+ LQ L+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 340 ERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 33 ARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 92
Query: 365 MSM 367
+SM
Sbjct: 93 LSM 95
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 71/101 (70%), Gaps = 14/101 (13%)
Query: 277 RETDDEY---HSEDVELE-------SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRIN 326
+ + EY HS DVE + SA+AK ++R A+R +A + H+++ER RR++I+
Sbjct: 284 HDHNSEYPINHSSDVEPQANSAPGNSANAKPRTR----ARRGQATDPHSIAERLRREKIS 339
Query: 327 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
E+M+ LQ L+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 340 ERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
Q R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K
Sbjct: 212 QPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKF 271
Query: 358 LQLQVQMMSM 367
LQLQV+++S+
Sbjct: 272 LQLQVKVLSV 281
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 71/101 (70%), Gaps = 14/101 (13%)
Query: 277 RETDDEY---HSEDVELE-------SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRIN 326
+ + EY HS DVE + SA+AK ++R A+R +A + H+++ER RR++I+
Sbjct: 207 HDHNSEYPINHSSDVEPQANSAPGNSANAKPRTR----ARRGQATDPHSIAERLRREKIS 262
Query: 327 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
E+M+ LQ L+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 263 ERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 303
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 58/73 (79%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
++ Q + A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y
Sbjct: 196 SQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 255
Query: 355 LKSLQLQVQMMSM 367
+K LQLQV+++SM
Sbjct: 256 VKFLQLQVKVLSM 268
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 255 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 314
Query: 365 MSM 367
+SM
Sbjct: 315 LSM 317
>gi|294462676|gb|ADE76883.1| unknown [Picea sitchensis]
Length = 244
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 60/79 (75%), Gaps = 10/79 (12%)
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQ----- 381
MRALQELIP CNKSDKASMLDEAIEYLK+LQLQVQ+MSMG G+ P++FPG Q
Sbjct: 1 MRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQIMSMGGGMGMPPLVFPGGMQHFQVP 60
Query: 382 ---YMPNMGMGIGMGMGMG 397
++ MGMGIGMG MG
Sbjct: 61 QMAHLSPMGMGIGMGYSMG 79
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 176 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 235
Query: 365 MSM 367
+SM
Sbjct: 236 LSM 238
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 199 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 258
Query: 365 MSM-----GCGVVPMMFPG 378
+SM V P++ G
Sbjct: 259 LSMSRLGGAAAVAPLVAEG 277
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
Q R A+R +A + H+++ER RR+RI E+M+ALQEL+P CNK+D+A+MLDE ++Y+K
Sbjct: 152 QVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKF 211
Query: 358 LQLQVQMMSM----GCGVVPMMFPGV 379
L+LQV+++SM G G V + V
Sbjct: 212 LRLQVKVLSMSRLGGAGAVAQLVADV 237
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
Q R A+R +A + H+++ER RR+RI E+M+ALQEL+P CNK+D+A+MLDE ++Y+K
Sbjct: 53 QVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKF 112
Query: 358 LQLQVQMMSM----GCGVVPMMFPGV 379
L+LQV+++SM G G V + V
Sbjct: 113 LRLQVKVLSMSRLGGAGAVAQLVADV 138
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 185 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 244
Query: 365 MSM-----GCGVVPMM 375
+SM G+ P++
Sbjct: 245 LSMSRLGGAAGMAPLV 260
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 57/70 (81%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
Q++ A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I+Y+K
Sbjct: 123 QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKF 182
Query: 358 LQLQVQMMSM 367
LQLQV+++SM
Sbjct: 183 LQLQVKVLSM 192
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 21/171 (12%)
Query: 222 GAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDD 281
G G + +GGG + TMC + + S S +
Sbjct: 231 GTGQQSQLAGGGLKAEQQEQNTMCNIPLPSFVSASQMAVSEAQGALIPSKTTSITHNNKS 290
Query: 282 EY-----HSEDVELE-------SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
EY HS DV+ + SA AK ++R A+R +A + H+++ER RR++I+E+M
Sbjct: 291 EYPIPISHSADVQHKANSGNGNSASAKPRAR----ARRGQATDPHSIAERLRREKISERM 346
Query: 330 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG-----CGVVPMM 375
+ LQ+L+P NK+DK+SMLDE I+Y+K LQLQV+++SM V+P++
Sbjct: 347 KNLQDLVPNSNKADKSSMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLPLL 397
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE ++Y+K LQLQV++
Sbjct: 242 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKV 301
Query: 365 MSM 367
+SM
Sbjct: 302 LSM 304
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 57/71 (80%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
+Q R AKR +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I+Y++
Sbjct: 188 RQLRQRQRAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVR 247
Query: 357 SLQLQVQMMSM 367
LQLQV+++SM
Sbjct: 248 FLQLQVKVLSM 258
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE ++Y+K LQLQV++
Sbjct: 241 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKV 300
Query: 365 MSM 367
+SM
Sbjct: 301 LSM 303
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 206 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 265
Query: 365 MSM-----GCGVVPMM 375
+SM G+ P++
Sbjct: 266 LSMSRLGGAAGMAPLV 281
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 206 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 265
Query: 365 MSM-----GCGVVPMM 375
+SM G+ P++
Sbjct: 266 LSMSRLGGAAGMAPLV 281
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 16/137 (11%)
Query: 243 TMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEY-----HSEDVELE------ 291
TMC + + S G + Q EY HS DV+ +
Sbjct: 253 TMCNIPLPSFVSGGQMAVTEAQQALIPSKITSLVHNNKSEYPVPIGHSSDVQPQANSAHG 312
Query: 292 -SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
S AK +SR A+R +A + H+++ER RR++I+E+M+ LQEL+P NK+DK+SMLDE
Sbjct: 313 NSVSAKPRSR----ARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDE 368
Query: 351 AIEYLKSLQLQVQMMSM 367
I+Y+K LQLQV+++SM
Sbjct: 369 IIDYVKFLQLQVKVLSM 385
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQ+QV++
Sbjct: 146 ARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQVKV 205
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 206 LSMSRLGGAGAV 217
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE IEY++ LQLQV++
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKV 160
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 161 LSMSRLGGAGAV 172
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 55/70 (78%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
+++ G S++RS E HNL+E+RRR +INE+++ LQ+++P C+KS++AS LD+ I Y+K
Sbjct: 164 RKTPGGGSSRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSKSNQASTLDQTIHYMK 223
Query: 357 SLQLQVQMMS 366
SLQ QVQ MS
Sbjct: 224 SLQHQVQAMS 233
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%)
Query: 296 KKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYL 355
+K G S++RS E HNL+E+RRR +INE+ + LQ+++P C+KS++AS LD+ I Y+
Sbjct: 166 RKAPAGGGSSRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKSNQASTLDQTIHYM 225
Query: 356 KSLQLQVQMMS 366
KSLQ QVQ MS
Sbjct: 226 KSLQHQVQAMS 236
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE IEY++ LQLQV++
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKV 160
Query: 365 MSM 367
+SM
Sbjct: 161 LSM 163
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I E+M+ LQEL+P NK+DKASMLDE IEY+K LQLQV++
Sbjct: 298 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKV 357
Query: 365 MSM-----GCGVVPMMFPG 378
+SM VVP++ G
Sbjct: 358 LSMSRLGAAEAVVPLITDG 376
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 138 ARRGQATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 197
Query: 365 MSM 367
+SM
Sbjct: 198 LSM 200
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 54/68 (79%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I Y+K LQ
Sbjct: 27 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQ 86
Query: 360 LQVQMMSM 367
LQV+++SM
Sbjct: 87 LQVKVLSM 94
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I E+M+ LQEL+P NK+DKASMLDE IEY+K LQLQV++
Sbjct: 151 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKV 210
Query: 365 MSM-----GCGVVPMMFPG 378
+SM VVP++ G
Sbjct: 211 LSMSRLGAAEAVVPLITDG 229
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 213 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVE 272
Query: 364 MMSMGCGVV-------------PMMFPGVQQYMPNMGMGIGMGMGMGRAWI 401
+SM V +FP Q PN+GM + M M +++
Sbjct: 273 FLSMKLAAVNPRLDFNLDELFTKEVFPSCAQSFPNIGMPLDMSMSNNPSYL 323
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 78/128 (60%), Gaps = 6/128 (4%)
Query: 249 VTSSPGGSSASAEPPAQKPAAEDRKR---KGRETDDEYHSEDVELESADAKKQSRGSTSA 305
V SPG +S + ++P E +G+++ + ++D +S +A K++ A
Sbjct: 208 VNDSPGKASNGPKEHEKRPKGEQNNGADVRGKQSVKQ--AKDNNSQSGEAPKENFIHVRA 265
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 364
+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 266 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 325
Query: 365 MSMGCGVV 372
+SM V
Sbjct: 326 LSMKLATV 333
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQEL+P NKSD+A+MLDE ++Y+K L+
Sbjct: 177 RPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLR 236
Query: 360 LQVQMMSM----GCGVVPMMFPGV 379
LQV+++SM G G V + V
Sbjct: 237 LQVKVLSMSRLGGAGAVAQLVADV 260
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQEL+P NK+D+A+MLDE ++Y+K L+
Sbjct: 121 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 180
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 181 LQVKVLSMSRLGGAGAV 197
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 67/100 (67%), Gaps = 5/100 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I E+M+ LQEL+P +K DKASMLDE IEY+K LQLQV++
Sbjct: 353 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQLQVKV 412
Query: 365 MSMG-----CGVVPMMFPGVQQYMPNMGMGIGMGMGMGRA 399
+SM V+P++ G + ++ + G+G+ A
Sbjct: 413 LSMSRLGATGAVIPLITDGQAEGSNSLSLSTSAGLGIDVA 452
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQEL+P NK+D+A+MLDE ++Y+K L+
Sbjct: 113 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 172
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 173 LQVKVLSMSRLGGAGAV 189
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQEL+P NK+D+A+MLDE ++Y+K L+
Sbjct: 112 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 171
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 172 LQVKVLSMSRLGGAGAV 188
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 11/97 (11%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R A + H+++ER RR++I E+M+ LQEL+P NK DKASMLDE IEY+K LQLQV++
Sbjct: 242 ARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKV 301
Query: 365 MSM-----GCGVVPMMFPGVQQ------YMPNMGMGI 390
+SM V+P++ G + P+ G+GI
Sbjct: 302 LSMSRLGAAGAVIPLLTDGQPEGHNSLSLSPSAGLGI 338
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
A+A K++ AKR +A H+L+ER RR+RI+E+MR LQEL+P CNK + KA MLDE
Sbjct: 224 AEASKENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEI 283
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 284 INYVQSLQQQVEFLSMKLATV 304
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQEL+P NK+D+A+MLDE ++Y+K L+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 360 LQVQMMSM----GCGVVPMM 375
LQV+++SM G G V +
Sbjct: 190 LQVKVLSMSRLGGAGAVAQL 209
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 13/132 (9%)
Query: 249 VTSSPGGSSASAEPPAQKPAAEDR-------KRKGRETDDEYHSEDVELESADAKKQSRG 301
V SPG +S ++ ++P E K+ ++ D +S+ S +A K++
Sbjct: 213 VKDSPGKASDGSKEHEKRPKVEQNNGADVRGKQSVKQAKDNNNSQ-----SGEAPKENFI 267
Query: 302 STSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQL 360
A+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLDE I Y++SLQ
Sbjct: 268 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 327
Query: 361 QVQMMSMGCGVV 372
QV+ +SM V
Sbjct: 328 QVEFLSMKLATV 339
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQEL+P NK+D+A+MLDE ++Y+K L+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 360 LQVQMMSM----GCGVVPMM 375
LQV+++SM G G V +
Sbjct: 190 LQVKVLSMSRLGGAGAVAQL 209
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 56/63 (88%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI+E+++ALQEL+P CNK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 144 ARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKV 203
Query: 365 MSM 367
+SM
Sbjct: 204 LSM 206
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 57/68 (83%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI+E+++ALQEL+P CNK+D+A+MLDE ++Y+K L+
Sbjct: 138 RPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLR 197
Query: 360 LQVQMMSM 367
LQV+++SM
Sbjct: 198 LQVKVLSM 205
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M+ LQEL+P N++DKASMLDE IEY+K LQLQV++
Sbjct: 300 ARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVKV 359
Query: 365 MSMG-----CGVVPMMFPGVQQYMPNMGMGI 390
+SM VVP++ Q N G G+
Sbjct: 360 LSMSRLGATEAVVPLL---TQSQTENSGGGL 387
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 57/77 (74%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQEL+P NK+D+A MLDE ++Y+K L+
Sbjct: 119 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDEILDYVKFLR 178
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 179 LQVKVLSMSRLGGAGAV 195
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 51/59 (86%)
Query: 309 RAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
+A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 170 QATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVLSM 228
>gi|224108413|ref|XP_002314839.1| predicted protein [Populus trichocarpa]
gi|222863879|gb|EEF01010.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
KR+R+AE+HN+S R RDRI K+RALQELIP C+K D+ SML++A+EYLK+L+LQV+++
Sbjct: 20 KRTRSAEMHNVS--RPRDRIKGKLRALQELIPNCHKQDRPSMLEDAVEYLKALKLQVEVI 77
Query: 366 SMGCGVVPMMFPGVQQYM 383
++ V P + ++
Sbjct: 78 TLSVIAVLQALPAINLFL 95
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 19/148 (12%)
Query: 244 MCEMTVTSSPGGSSA---SAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSR 300
+ T T++ G SS S P A + R RK R +++ +E +KKQ R
Sbjct: 68 LANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRKARNSNNSKEG----VEGRKSKKQKR 123
Query: 301 GS----------TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
GS A+R +A + H+L+ER RR++I+E+MR LQ L+P C+K + KA MLD
Sbjct: 124 GSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLD 183
Query: 350 EAIEYLKSLQLQVQMMSMGC-GVVPMMF 376
E I Y+++LQ QV+ +SM + P+++
Sbjct: 184 EIINYVQTLQTQVEFLSMKLTSISPVVY 211
>gi|26185713|emb|CAD58595.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 175
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 61/79 (77%), Gaps = 5/79 (6%)
Query: 322 RDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFP--GV 379
R+RINE+M+ LQEL+PRC K+DK SML++ IEY+KSLQLQ+QMMSMG G++P M
Sbjct: 1 RERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMSMGHGMMPPMMHEGNT 60
Query: 380 QQYMPNMGMGIGMGMGMGR 398
QQ+MP+M MG+ GM R
Sbjct: 61 QQFMPHMAMGMK---GMNR 76
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 8/108 (7%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQEL+P NK+D+A+MLDE ++Y+K L+
Sbjct: 123 RPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 182
Query: 360 LQVQMMSM----GCGVVPMMFPGVQQYMPNMGMGIGMGMGMGRAWIWE 403
LQV+++SM G G V + + P G G+ IWE
Sbjct: 183 LQVKVLSMSRLGGAGAVAQLIADI----PLSVKGEEASDSGGKQQIWE 226
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 263 PAQKPAAEDRKRKGRETDDEYHSED---VELESADAKKQSRGSTSAKRS-RAAEVHNLSE 318
P AED R T+D+ +++ V +++ K+ R T A+RS R ++ H+L+E
Sbjct: 68 PVAVAVAEDDDSGERWTEDQVPTDEGICVMGRRSESSKERRKITRARRSSRYSQTHSLTE 127
Query: 319 RRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVVP 373
R+RR +INE ++ LQ+L+P C+KS ++AS LD+ I Y+KSLQ VQ MS+GC + P
Sbjct: 128 RKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQHVQAMSVGCIMKP 183
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M++LQ+L+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 322 ARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 381
Query: 365 MSMG-----CGVVPMM 375
+SM V+P++
Sbjct: 382 LSMSRLGAPGAVLPLL 397
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 153 ARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKV 212
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 213 LSMSRLGGAGAV 224
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 171 ARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKV 230
Query: 365 MSM----GCGVVPMMFPGV 379
+SM G G V + V
Sbjct: 231 LSMSRLGGAGAVAQLVADV 249
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 171 ARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKV 230
Query: 365 MSM----GCGVVPMMFPGV 379
+SM G G V + V
Sbjct: 231 LSMSRLGGAGAVAQLVADV 249
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQEL+P NK+D+A+MLDE ++Y+K L+
Sbjct: 21 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 80
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 81 LQVKVLSMSRLGGAGAV 97
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 177 ARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKV 236
Query: 365 MSM----GCGVVPMM 375
+SM G G V +
Sbjct: 237 LSMSRLGGAGAVAQL 251
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 52/67 (77%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQ
Sbjct: 247 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 306
Query: 360 LQVQMMS 366
LQV MS
Sbjct: 307 LQVLSMS 313
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQEL+P NK+D+A+MLDE ++Y+K L+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 360 LQVQMMSM----GCGVVPMM 375
LQV+++S+ G G V +
Sbjct: 190 LQVKVLSISRLGGAGAVAQL 209
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQ+L+P NK+DKASMLDE ++Y+K LQLQV++
Sbjct: 6 ARRGQATDPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQLQVKV 65
Query: 365 MSM 367
+SM
Sbjct: 66 LSM 68
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQ+L+P NK+D+A+MLDE ++Y+K L+
Sbjct: 178 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 237
Query: 360 LQVQMMSM----GCGVVPMMFPGV 379
LQV+++SM G G V + +
Sbjct: 238 LQVKVLSMSRLGGAGAVAQLVADI 261
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
AA +HN SER+RRD+IN++M+ LQ+L+P +K+DKASMLDE IEYLK LQ QVQ
Sbjct: 283 AAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 336
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 168 ARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKV 227
Query: 365 MSM----GCGVVPMMFPGV 379
+SM G G V + V
Sbjct: 228 LSMSRLGGAGAVAQLVADV 246
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 55/68 (80%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR RI E+++ALQEL+P CNK+D+A+MLDE ++Y+K L+
Sbjct: 17 RPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLR 76
Query: 360 LQVQMMSM 367
LQV+++SM
Sbjct: 77 LQVKVLSM 84
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+MRALQ+L+P NK+D+A+MLDE ++Y+K L+
Sbjct: 129 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 188
Query: 360 LQVQMMSM----GCGVVPMMFPGV 379
LQV+++SM G G V + +
Sbjct: 189 LQVKVLSMSRLGGAGAVAQLVADI 212
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKV 160
Query: 365 MSM----GCGVVPMMFPGV 379
+SM G G V + V
Sbjct: 161 LSMSRLGGAGAVAQLVADV 179
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
SA+A K++ A+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLDE
Sbjct: 221 SAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 280
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 281 IINYVQSLQQQVEFLSMKLATV 302
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 65/89 (73%), Gaps = 9/89 (10%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEA 351
SA AK ++R A+R +A + H+++ER RR++I+E+M+ LQ+L+P NK+DK+SMLDE
Sbjct: 312 SASAKPRAR----ARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEI 367
Query: 352 IEYLKSLQLQVQMMSMG-----CGVVPMM 375
I+Y+K LQLQV+++ M V+P++
Sbjct: 368 IDYVKFLQLQVKVLCMSRLGAPGAVLPLL 396
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
Q R A R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K
Sbjct: 234 QHRQRERAWRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKF 293
Query: 358 LQLQVQMMS 366
LQLQV MS
Sbjct: 294 LQLQVLSMS 302
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M+ LQ+L+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 322 ARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 381
Query: 365 MSMG-----CGVVPMM 375
+SM V+P++
Sbjct: 382 LSMSRLGAPGAVLPLL 397
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M+ LQEL+P NK++KASMLDE I+Y+K LQLQV++
Sbjct: 316 ARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKV 375
Query: 365 MSM-----GCGVVPMM 375
+SM VVP++
Sbjct: 376 LSMSRLGAAEAVVPLL 391
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M+ LQ+L+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 322 ARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 381
Query: 365 MSMG-----CGVVPMM 375
+SM V+P++
Sbjct: 382 LSMSRLGAPGAVLPLL 397
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
AA +HN SER+RRD+IN++M+ LQ+L+P +K+DKASMLDE IEYLK LQ QVQ
Sbjct: 29 AAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 82
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M+ LQEL+P NK++KASMLDE I+Y+K LQLQV++
Sbjct: 316 ARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKV 375
Query: 365 MSM-----GCGVVPMM 375
+SM VVP++
Sbjct: 376 LSMSRLGAAEAVVPLL 391
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 56/63 (88%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI+E+++ALQEL+P CNK+D+A+++DE ++Y+K L+LQV++
Sbjct: 136 ARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKFLRLQVKV 195
Query: 365 MSM 367
+SM
Sbjct: 196 LSM 198
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 70/121 (57%), Gaps = 18/121 (14%)
Query: 270 EDRKRKGR-ETDDEYHSED---------VELESAD-------AKKQSRGSTSAKRSRAAE 312
+D KRKG E HS D V +E AD AK++ AKR +A
Sbjct: 73 KDGKRKGSGEDSSSLHSLDEASALLQREVSMECADEKPGDAGAKREDYVHVRAKRGQATN 132
Query: 313 VHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGV 371
H+L+ER RR++INE+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 133 SHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSA 192
Query: 372 V 372
+
Sbjct: 193 I 193
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M+ LQ+L+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 319 ARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 378
Query: 365 MSMG-----CGVVPMM 375
+SM V+P++
Sbjct: 379 LSMSRVGAPGAVLPLL 394
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQ
Sbjct: 156 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 215
Query: 360 LQVQ 363
LQV+
Sbjct: 216 LQVK 219
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR RI E+++ALQEL+P CNK+D+A+MLDE ++Y+K L+LQ+++
Sbjct: 18 ARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLRLQIKV 77
Query: 365 MSM 367
+SM
Sbjct: 78 LSM 80
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 54/63 (85%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M+ LQ+L+P NK+DKASMLDE I+Y+K LQLQV++
Sbjct: 284 ARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 343
Query: 365 MSM 367
+SM
Sbjct: 344 LSM 346
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
SA+A K++ A+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLDE
Sbjct: 68 SAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 127
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 128 IINYVQSLQQQVEFLSMKLATV 149
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
S +A K++ A+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLDE
Sbjct: 231 SGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 290
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 291 IINYVQSLQQQVEFLSMKLATV 312
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
ADA ++ AKR +A H+L+ER RR++INE+M+ LQ+L+P CNK + KA MLDE
Sbjct: 618 ADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 677
Query: 352 IEYLKSLQLQVQMMSM 367
I Y++SLQ QV+ +SM
Sbjct: 678 INYVQSLQRQVEFLSM 693
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 53/67 (79%), Gaps = 5/67 (7%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM-----G 368
H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 224 HSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 283
Query: 369 CGVVPMM 375
G+ P++
Sbjct: 284 AGMAPLV 290
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
ADA ++ AKR +A H+L+ER RR++INE+M+ LQ+L+P CNK + KA MLDE
Sbjct: 618 ADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 677
Query: 352 IEYLKSLQLQVQMMSM 367
I Y++SLQ QV+ +SM
Sbjct: 678 INYVQSLQRQVEFLSM 693
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
ADA ++ AKR +A H+L+ER RR++INE+M+ LQ+L+P CNK + KA MLDE
Sbjct: 618 ADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 677
Query: 352 IEYLKSLQLQVQMMSM 367
I Y++SLQ QV+ +SM
Sbjct: 678 INYVQSLQRQVEFLSM 693
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
+S +A K A+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLD
Sbjct: 228 QSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLD 287
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQ 381
E I Y++SLQ QV+ +SM V P ++ V++
Sbjct: 288 EIINYVQSLQQQVEFLSMKLATVNPELYNDVEK 320
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+ NK+DKASMLDE I+Y+K LQLQV
Sbjct: 147 ARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQVLS 206
Query: 365 MS 366
MS
Sbjct: 207 MS 208
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 51/59 (86%)
Query: 309 RAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
+A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 265 QATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 323
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E+M+ALQEL+ NK+DKASMLDE I+Y+K LQLQV
Sbjct: 119 ARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQVLS 178
Query: 365 MS 366
MS
Sbjct: 179 MS 180
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 14/111 (12%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+LIP CNK + KA MLDE I Y++SLQ QV+
Sbjct: 194 ARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVE 253
Query: 364 MMSMGCGVV-------------PMMFPGVQQYMPNMGMGIGMGMGMGRAWI 401
+SM V +FP Q PN+G+ M + +++
Sbjct: 254 FLSMKLAAVNPRLDFNIDELFAKEVFPSCAQSFPNIGIPSDMSISNNPSYL 304
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 51/59 (86%)
Query: 309 RAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
+A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 265 QATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 323
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 14/111 (12%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+LIP CNK + KA MLDE I Y++SLQ QV+
Sbjct: 194 ARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVE 253
Query: 364 MMSMGCGVV-------------PMMFPGVQQYMPNMGMGIGMGMGMGRAWI 401
+SM V +FP Q PN+G+ M + +++
Sbjct: 254 FLSMKLAAVNPGLDFNIDELFAKEVFPSCAQSFPNIGIPSDMSISNNPSYL 304
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
ADA ++ AKR +A H+L+ER RR++INE+M+ LQ+L+P CNK + KA MLDE
Sbjct: 115 ADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 174
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM +
Sbjct: 175 INYVQSLQRQVEFLSMKLSTI 195
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 53/63 (84%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M+ LQEL+P NK+DKASML+E IEY+K LQLQ ++
Sbjct: 284 ARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQLQTKV 343
Query: 365 MSM 367
+SM
Sbjct: 344 LSM 346
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 55/68 (80%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 160 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLR 219
Query: 360 LQVQMMSM 367
LQV+++SM
Sbjct: 220 LQVKVLSM 227
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 25/167 (14%)
Query: 228 TSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSED 287
++SGGGGG +DLT ++ S S++ + + D + G+
Sbjct: 64 STSGGGGG----QDLT--DLEAKRSKTNKSSNNKGSLRTEVETDSRSAGKAVSKN----- 112
Query: 288 VELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKAS 346
+ +A+ KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KAS
Sbjct: 113 --IPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKAS 170
Query: 347 MLDEAIEYLKSLQLQVQMMSM-----------GCGVVPMMFPGVQQY 382
+LDE I Y++SLQ QV+ +SM G V P G Q Y
Sbjct: 171 VLDEIINYIQSLQCQVEFLSMKLEAVNAQANQGVEVFPAKDYGSQTY 217
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 261 EPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERR 320
E P + +K K ++ + + E + S +A K++ A+R +A H+L+ER
Sbjct: 164 EDPQRGSDQSQKKHKNDQSKETVNKESSQ--SEEAPKENYIHMRARRGQATNSHSLAERV 221
Query: 321 RRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
RR++I+E+MR LQEL+P CNK + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 222 RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 274
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
+ +A K++ A+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLDE
Sbjct: 254 NGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 313
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 314 IINYVQSLQQQVEFLSMKLATV 335
>gi|18378953|ref|NP_563650.1| transcription factor HFR1 [Arabidopsis thaliana]
gi|20532238|sp|Q9FE22.1|HFR1_ARATH RecName: Full=Transcription factor HFR1; AltName: Full=Basic
helix-loop-helix protein 26; Short=AtbHLH26; Short=bHLH
26; AltName: Full=Protein LONG HYPOCOTYL IN FAR-RED 1;
AltName: Full=Protein REDUCED PHYTOCHROME SIGNALING;
AltName: Full=Reduced sensitivity to far-red light;
AltName: Full=Transcription factor EN 68; AltName:
Full=bHLH transcription factor bHLH026
gi|11870115|gb|AAG40617.1|AF324245_1 bHLH-like protein HFR1 [Arabidopsis thaliana]
gi|12025106|gb|AAG45733.1|AF288287_1 reduced phytochrome signaling 1 [Arabidopsis thaliana]
gi|13183644|gb|AAK15282.1|AF323182_1 basic helix-loop-helix FBI1 protein [Arabidopsis thaliana]
gi|332189297|gb|AEE27418.1| transcription factor HFR1 [Arabidopsis thaliana]
Length = 292
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 29/141 (20%)
Query: 278 ETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEV------------------HNLSER 319
ETDD +H +D E +D + R + R +V S+R
Sbjct: 85 ETDDHHHIKDFS-ERSDHRFYLRNKHENPKKRRIQVLSSDDESEEFTREVPSVTRKGSKR 143
Query: 320 RRRD-RINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPG 378
RRRD +++ KMR LQ+L+P C+K+DK S+LD+ IEY+K+LQLQ+QMMS GV P P
Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMS-TVGVNPYFLPA 202
Query: 379 VQQYMPNMGMGIGMGMGMGRA 399
+G GM M A
Sbjct: 203 T--------LGFGMHNHMLTA 215
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 75/116 (64%), Gaps = 13/116 (11%)
Query: 273 KRKGRETDDEYHSEDVELESADAKKQSRGS----------TSAKRSRAAEVHNLSERRRR 322
K++GR+ + +S++ +E +KKQ RGS A+R +A + H+L+ER RR
Sbjct: 98 KKRGRKARNVSNSKE-GVEGTKSKKQKRGSKEEPPKDYIHVRARRGQATDSHSLAERVRR 156
Query: 323 DRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGC-GVVPMMF 376
++I+E+MR LQ L+P C+K + KA MLDE I Y+++LQ QV+ +SM + P+++
Sbjct: 157 EKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFLSMKLTSISPVVY 212
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 17/120 (14%)
Query: 270 EDRKRKGRETDDE---------YHSEDVELESAD-------AKKQSRGSTSAKRSRAAEV 313
ED KRKG D +V +E AD AK++ AKR +A
Sbjct: 75 EDGKRKGSGEDSSSLRSLGETSALQREVSMECADEKAGDARAKREDYVHVRAKRGQATNS 134
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
H+L+ER RR++INE+M+ LQ+L+P CNK + KA MLDE I Y++SLQ Q++ +SM +
Sbjct: 135 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAI 194
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
+S +A K++ A+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLD
Sbjct: 194 QSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLD 253
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 254 EIINYVQSLQQQVEFLSMKLATV 276
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 271 DRKRKGRETDDEYHSEDVEL-ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
D+ +K + D + + E +S +A K++ A+R +A H+L+ER RR++I+E+M
Sbjct: 121 DQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERM 180
Query: 330 RALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
R LQEL+P CNK + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 181 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 224
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
Query: 256 SSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHN 315
SS +P KPA +K + ++ + +A +K A+R +A + H+
Sbjct: 121 SSGRGKPEKAKPAGTRKK-------GDVAAQKQDPRAAGGQKTDYIHVRARRGQATDSHS 173
Query: 316 LSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
L+ER RR+RI+E+MR LQEL+P C+K + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 174 LAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSM 226
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
+S + K++ A+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLD
Sbjct: 151 QSGEVPKENYFHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLD 210
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 211 EIINYVQSLQQQVEFLSMKLATV 233
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEA 351
++A KQ A+R +A + H+L+ER RR++I+E+M LQ+L+P CNK KAS+LDE
Sbjct: 121 SEAPKQDYIHVRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEI 180
Query: 352 IEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQYMP 384
I Y+++LQ QV+ +SM V M PG++ + P
Sbjct: 181 INYIQALQRQVEFLSMKLEAVNSQMNPGIEGFPP 214
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M+ LQ+L+P NK+DKASMLDE I+++K LQLQV++
Sbjct: 322 ARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDHVKFLQLQVKV 381
Query: 365 MSMG-----CGVVPMM 375
+SM V+P++
Sbjct: 382 LSMSRLGAPGAVLPLL 397
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 17/120 (14%)
Query: 270 EDRKRKGRETDDE---------YHSEDVELESAD-------AKKQSRGSTSAKRSRAAEV 313
ED KRKG D +V +E AD AK++ AKR +A
Sbjct: 75 EDGKRKGSGEDSSSLRSLGETSALQREVSMECADEKAGDARAKREDYVHVRAKRGQATNS 134
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
H+L+ER RR++INE+M+ LQ+L+P CNK + KA MLDE I Y++SLQ Q++ +SM +
Sbjct: 135 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAI 194
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 14/116 (12%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
++ +A K+ AKR +A H+L+ER RR+RI+E+M+ LQ+L+P CNK + KA MLD
Sbjct: 234 QTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLD 293
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQYM------------PNMGMGIGM 392
E I Y++SLQ QV+ +SM V P M +++ + P +G G GM
Sbjct: 294 EIINYVQSLQRQVEFLSMKLATVYPEMNVQIERILSSDIHHSKGGTAPILGFGPGM 349
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 70/95 (73%), Gaps = 9/95 (9%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC-NKSDKASMLDE 350
S ++K++ G A+RS AE HNL+E+RRR +I++K++ L++L+P C +KS++AS+LD+
Sbjct: 8 SCGSRKKATGG--ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQ 65
Query: 351 AIEYLKSLQLQVQM----MSMGCGVV--PMMFPGV 379
I+++KSLQ Q+Q+ +S+GC + P ++P V
Sbjct: 66 TIQHIKSLQQQIQVQPKAISLGCDAIKPPAVYPVV 100
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN-KSDKASMLD 349
ES + K++ A+R +A H+L+ER RR++I+E+MR LQEL+P C+ K+ KA MLD
Sbjct: 219 ESEEGSKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLD 278
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQ 381
E I Y++SLQ QV+ +SM V P + V+Q
Sbjct: 279 EIINYVQSLQQQVEFLSMKLATVNPQLNFNVEQ 311
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 17/115 (14%)
Query: 270 EDRKRKGRETDDE---------YHSEDVELESAD-------AKKQSRGSTSAKRSRAAEV 313
ED KRKG D +V +E AD AK++ AKR +A
Sbjct: 49 EDGKRKGSGEDSSSLRSLGETSALQREVSMECADEKAGDARAKREDYVHVRAKRGQATNS 108
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
H+L+ER RR++INE+M+ LQ+L+P CNK + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 109 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSM 163
>gi|297816208|ref|XP_002875987.1| hypothetical protein ARALYDRAFT_348075 [Arabidopsis lyrata subsp.
lyrata]
gi|297321825|gb|EFH52246.1| hypothetical protein ARALYDRAFT_348075 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 319 RRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMF 376
++RRD IN+KMR LQ+L+P +K D S+LDEAI Y+K+LQLQVQMM+MG V MM
Sbjct: 142 KQRRD-INKKMRTLQDLLPNSHKDDNESVLDEAINYMKNLQLQVQMMTMGNTFVTPSMML 200
Query: 377 P------GVQQYMPNMGMGIGM 392
P G QQ++P +G G+
Sbjct: 201 PFMGMQMGAQQFLPAHVLGAGL 222
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 11/109 (10%)
Query: 265 QKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
++P + RK G++T+D ++DA K+ A+ +A H+L+ER RR++
Sbjct: 235 KRPISASRKSNGKQTED----------NSDAPKEDYIHIRARSGQATNSHSLAERVRREK 284
Query: 325 INEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
I+E+M+ LQ+L+P C+K KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 285 ISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTV 333
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 11/109 (10%)
Query: 265 QKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
++P + RK G++T+D ++DA K+ A+ +A H+L+ER RR++
Sbjct: 235 KRPISASRKSNGKQTED----------NSDAPKEDYIHIRARSGQATNSHSLAERVRREK 284
Query: 325 INEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
I+E+M+ LQ+L+P C+K KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 285 ISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTV 333
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 8/94 (8%)
Query: 287 DVELESAD-------AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
+V +E AD AK++ AKR +A H+L+ER RR++INE+M+ LQ+L+P C
Sbjct: 105 EVSMECADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGC 164
Query: 340 NK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
NK + KA MLDE I Y++SLQ Q++ +SM +
Sbjct: 165 NKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAI 198
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 35/150 (23%)
Query: 258 ASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAK---------KQSRGSTS---- 304
AS EP + + RKR G++ D + + +EL S AK KQ ST+
Sbjct: 226 ASGEPSIKGLNPKKRKRNGQDGDSDKATGTLELPSETAKDNCESRKKGKQQTSSTAKASG 285
Query: 305 ---------------------AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-S 342
A+R +A H+L+ER RR++I+E+M+ LQ+L+P CNK +
Sbjct: 286 KNAKQGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVT 345
Query: 343 DKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 346 GKAVMLDEIINYVQSLQQQVEFLSMKLATV 375
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 289 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASM 347
E E A+ + A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA M
Sbjct: 18 EKEVAEDPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVM 77
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQYMP 384
LDE I Y++SLQ QV+ +SM V P M V ++P
Sbjct: 78 LDEIINYVQSLQRQVEFLSMKLSTVNPQMEFDVDNFLP 115
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 52/62 (83%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR++I+++M+ LQEL+P N++DKASMLDE IEY+K LQLQV++
Sbjct: 300 ARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVKV 359
Query: 365 MS 366
S
Sbjct: 360 RS 361
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 166 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVE 225
Query: 364 MMSM 367
+SM
Sbjct: 226 FLSM 229
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 166 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVE 225
Query: 364 MMSM 367
+SM
Sbjct: 226 FLSM 229
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 31/187 (16%)
Query: 227 ATSSGGGGGSSGARDLTMCEMTVTSSPGGSS--------------ASAEPPAQKPAAEDR 272
A + GG S RD +M E TVT GG S Q + D+
Sbjct: 44 AQNLGGFRECSTNRDGSMEESTVTEQSGGGRKRKDVSSEDESSRMVSTSSANQLSNSNDK 103
Query: 273 KRKGRETDDEYHSEDVELE--SADAKKQSRGS-----------TSAKRSRAAEVHNLSER 319
+ K E+ DE E++ S+D KK + S A+R +A + H+L+ER
Sbjct: 104 RMKVVESRDENGGIKAEVDPNSSDGKKLAEQSPKPEPPKDYIHVRARRGQATDSHSLAER 163
Query: 320 RRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVVPM---M 375
RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+ +SM V +
Sbjct: 164 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNI 223
Query: 376 FPGVQQY 382
PG++ +
Sbjct: 224 TPGIEGF 230
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+M+ LQ L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 83 ARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVE 142
Query: 364 MMSMGCGVVPMMFPGVQQYMPNMGM 388
+SM + YMP+ M
Sbjct: 143 FLSMKLATMNPQLDFDSHYMPSKDM 167
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 6/92 (6%)
Query: 287 DVELESAD-----AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK 341
+V +E AD AK++ AKR +A H+L+ER RR++IN +M+ LQ+L+P CNK
Sbjct: 133 EVSMECADENAAGAKREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNK 192
Query: 342 -SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
+ KA MLDE I Y++SLQ QV+ +SM +
Sbjct: 193 ITGKAMMLDEIINYVQSLQRQVEFLSMKLSAI 224
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
Query: 265 QKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
++P RK G++T+D+ +DA K+ A+ +A H+L+ER RR++
Sbjct: 237 KRPIVTSRKSNGKQTEDK----------SDAPKEDYIHIRARSGQATNSHSLAERVRREK 286
Query: 325 INEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
I+E+M+ LQ+L+P C+K KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 287 ISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSAV 335
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 8/94 (8%)
Query: 287 DVELESAD-------AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
+V +E AD AK++ AKR +A H+L+ER RR++INE+M+ LQ+L+P C
Sbjct: 101 EVSMECADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGC 160
Query: 340 NK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
NK + KA MLDE I Y++SLQ Q++ +SM +
Sbjct: 161 NKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAI 194
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 40/216 (18%)
Query: 170 PSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAA-- 227
P N SV ++ESTV R+SE + N G+G +
Sbjct: 185 PHNDVSVAVKESTV-------------RSSEQAKP--------------NVPGSGNVSED 217
Query: 228 TSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSED 287
T S GG G G + + + S A+ +Q+ E + +DE
Sbjct: 218 TQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNS 277
Query: 288 VELESADAKKQSRGSTS----------AKRSRAAEVHNLSERRRRDRINEKMRALQELIP 337
+S K+Q + S+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P
Sbjct: 278 PGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 337
Query: 338 RCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
CNK + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 338 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 373
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 21/119 (17%)
Query: 291 ESADAKKQSRGS-------TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-S 342
+++++K+ S+ S A+R +A + H+L+ER RR++I+E+M LQ+L+P CNK +
Sbjct: 175 DTSNSKQNSKASEKPDYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVT 234
Query: 343 DKASMLDEAIEYLKSLQLQVQMMSMGCGVV-------------PMMFPGVQQYMPNMGM 388
KA MLDE I Y++SLQ QV+ +SM V +FP PN+GM
Sbjct: 235 GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFSMDDLFDKDVFPTCAANFPNIGM 293
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 15/114 (13%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTS------------AKRSRAAEVHNLSER 319
++ KG E +D E+ + D KQ++ ST A+R +A + H+L+ER
Sbjct: 309 KRSKGNEKNDVKAEEEHKGNGDD--KQNKASTKPPEPPKDYIHVRARRGQATDSHSLAER 366
Query: 320 RRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 367 VRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASV 420
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 6/92 (6%)
Query: 287 DVELESAD-----AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK 341
+V +E AD AK++ AKR +A H+L+ER RR++IN +M+ LQ+L+P CNK
Sbjct: 133 EVSMECADENAAGAKREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNK 192
Query: 342 -SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
+ KA MLDE I Y++SLQ QV+ +SM +
Sbjct: 193 ITGKAMMLDEIINYVQSLQRQVEFLSMKLSAI 224
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 290 LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASML 348
L +A+ KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KAS+L
Sbjct: 111 LPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVL 170
Query: 349 DEAIEYLKSLQLQVQMMSMGCGVV 372
DE I Y++SLQ QV+ +SM V
Sbjct: 171 DEIINYIQSLQCQVEFLSMKLEAV 194
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 166 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVE 225
Query: 364 MMSM 367
+SM
Sbjct: 226 FLSM 229
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 271 DRKRKGRETDDEYHSEDVEL-ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
D+ +K + D + + E +S +A K++ A+R +A H+L+ER RR++I+E+M
Sbjct: 173 DQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERM 232
Query: 330 RALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
R LQEL P CNK + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 233 RLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 276
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+M+ LQ L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 113 ARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVE 172
Query: 364 MMSMGCGVVPMMFPGVQQYMPNMGM 388
+SM + YMP+ M
Sbjct: 173 FLSMKLATMNPQLDFDSHYMPSKDM 197
>gi|3522944|gb|AAC34226.1| hypothetical protein [Arabidopsis thaliana]
Length = 394
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 34/131 (25%)
Query: 273 KRKGRETDDE---YHSEDVELESADAKKQSRGST---SAKRSRAAEVHNLSERRRRDRIN 326
KRK + ++E Y S + + ES DAK Q T KR R+ EVH L ER
Sbjct: 187 KRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYER------- 239
Query: 327 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYMP 384
DKAS+LDEAI+Y+++LQLQVQMMSMG G++ P M P + Y P
Sbjct: 240 ---------------DDKASLLDEAIKYMRTLQLQVQMMSMGNGLIRPPTMLP-MGHYSP 283
Query: 385 NMGMGIGMGMG 395
MG+GM MG
Sbjct: 284 ---MGLGMHMG 291
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 43/217 (19%)
Query: 170 PSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAA-- 227
P N SV ++ESTV R+SE + N G+G +
Sbjct: 185 PHNDVSVAVKESTV-------------RSSEQAKP--------------NVPGSGNVSED 217
Query: 228 TSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRET-DDEYHSE 286
T S GG G G T G +S +A+ + + E+ G E +DE
Sbjct: 218 TQSSGGNGQKGRE--TSSNTKKRKRNGQNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPN 275
Query: 287 DVELESADAKKQSRGSTS----------AKRSRAAEVHNLSERRRRDRINEKMRALQELI 336
+S K+Q + S+ A+R +A H+L+ER RR++I+E+M+ LQ+L+
Sbjct: 276 SPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLV 335
Query: 337 PRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
P CNK + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 336 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 372
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 9/122 (7%)
Query: 252 SPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAA 311
SP S+S E ++ + R +K E D+ S D + + A+R +A
Sbjct: 215 SPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVR--------ARRGQAT 266
Query: 312 EVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCG 370
+ H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 326
Query: 371 VV 372
V
Sbjct: 327 SV 328
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 9/122 (7%)
Query: 252 SPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAA 311
SP S+S E ++ + R +K E D+ S D + + A+R +A
Sbjct: 209 SPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVR--------ARRGQAT 260
Query: 312 EVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCG 370
+ H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 261 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 320
Query: 371 VV 372
V
Sbjct: 321 SV 322
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
A++ ++ AKR +A H+L+ER RR++INE+M+ LQ+L+P CNK + KA MLDE
Sbjct: 108 AESNREDYVHIRAKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEI 167
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 168 INYVQSLQRQVEFLSMKLSAV 188
>gi|42568685|ref|NP_200935.2| transcription factor PIF7 [Arabidopsis thaliana]
gi|182676517|sp|Q570R7.2|PIF7_ARATH RecName: Full=Transcription factor PIF7; AltName: Full=Basic
helix-loop-helix protein 72; Short=AtbHLH72; Short=bHLH
72; AltName: Full=Phytochrome-interacting factor 7;
AltName: Full=Transcription factor EN 109; AltName:
Full=bHLH transcription factor bHLH072
gi|225879146|dbj|BAH30643.1| hypothetical protein [Arabidopsis thaliana]
gi|332010062|gb|AED97445.1| transcription factor PIF7 [Arabidopsis thaliana]
Length = 366
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 271 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
D R G ET D +E E E+ + G ++ +R RAA +HN SERRRRDRIN++MR
Sbjct: 135 DYFRSGSETQD---TEGDEQET----RGEAGRSNGRRGRAAAIHNESERRRRDRINQRMR 187
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV-VPMMFP 377
LQ+L+P +K+DK S+LD+ IE+LK LQ QVQ MS+ + MM P
Sbjct: 188 TLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIP 235
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 69/105 (65%), Gaps = 11/105 (10%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
++SR +TSA AA+ +L R+RR+RINE++R LQ L+P K D ++ML+EA++Y+K
Sbjct: 262 RKSRATTSA----AADPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVK 317
Query: 357 SLQLQVQMMSMG--CGVVPMMFPGVQQYMPNMGMGIGMGMGMGRA 399
LQLQ++++S P+++ G+ N+G+ +G+ GR+
Sbjct: 318 FLQLQIKLLSSEDLWMYAPIVYNGI-----NIGLDLGISPTKGRS 357
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 9/122 (7%)
Query: 252 SPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAA 311
SP S+S E ++ + R +K E D+ S D + + A+R +A
Sbjct: 215 SPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVR--------ARRGQAT 266
Query: 312 EVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCG 370
+ H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 326
Query: 371 VV 372
V
Sbjct: 327 SV 328
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 247 MTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAK 306
+ + S G S + P +K + +E + +D +K A+
Sbjct: 145 IKIGSEDGESKITGNPNTKKNCVAEDTSNSKENS----------KVSDVQKTDYIHVRAR 194
Query: 307 RSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMM 365
R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+ +
Sbjct: 195 RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFL 254
Query: 366 SMGCGVV-------------PMMFPGVQQYMPNMGMGIGMGMGMGRAWI 401
SM V +FP MG+ G+ ++
Sbjct: 255 SMKLATVNPRLDFNIDDLFEKEVFPNCDANASFQAMGMSTGLNSNNPYL 303
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 247 MTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAK 306
+ + S G S + P +K + +E + +D +K A+
Sbjct: 145 IKIGSEDGESKITGNPNTKKNCVAEDTSNSKENS----------KVSDVQKTDYIHVRAR 194
Query: 307 RSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMM 365
R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+ +
Sbjct: 195 RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFL 254
Query: 366 SMGCGVV-------------PMMFPGVQQYMPNMGMGIGMGMGMGRAWI 401
SM V +FP MG+ G+ ++
Sbjct: 255 SMKLATVNPRLDFNIDDLFEKEVFPNCDANASFQAMGMSTGLNSNNPYL 303
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 22/134 (16%)
Query: 261 EPPAQKPAAEDRKRKG--------RETDDEYHSED-VELESADAKKQSRGSTS------- 304
E P+ P+A D K R DE + D + E +KQ++ +T
Sbjct: 283 ETPSSSPSASDVKVAAEKDESTAKRSKSDEANGHDKAKAEQNGNQKQNKDNTKLPEPPKD 342
Query: 305 -----AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSL 358
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SL
Sbjct: 343 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 402
Query: 359 QLQVQMMSMGCGVV 372
Q QV+ +SM V
Sbjct: 403 QRQVEFLSMKLATV 416
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN++M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 298 ARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQHQVE 357
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 358 FLSMKLATV 366
>gi|297797077|ref|XP_002866423.1| hypothetical protein ARALYDRAFT_358332 [Arabidopsis lyrata subsp.
lyrata]
gi|297312258|gb|EFH42682.1| hypothetical protein ARALYDRAFT_358332 [Arabidopsis lyrata subsp.
lyrata]
Length = 406
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 72/110 (65%), Gaps = 8/110 (7%)
Query: 271 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
D R G ET +D E + + + ++ G +S +R RAA +HN SERRRRDRIN++MR
Sbjct: 178 DYIRSGSET------QDTEGDEQETRGEA-GRSSGRRGRAAAIHNESERRRRDRINQRMR 230
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV-VPMMFPGV 379
LQ+L+P +K+DK S+LD+ IE+LK LQ QVQ MS+ + MM P +
Sbjct: 231 TLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIPQL 280
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
+S+D K A+R +A H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLD
Sbjct: 291 QSSDLPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 350
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 351 EIINYVQSLQRQVEFLSMKLATV 373
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
+S+D K A+R +A H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLD
Sbjct: 291 QSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 350
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 351 EIINYVQSLQRQVEFLSMKLATV 373
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 148 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 207
Query: 364 MMSM 367
+SM
Sbjct: 208 FLSM 211
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 5/104 (4%)
Query: 270 EDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
++R++KGR + + +E E DA+K A+R +A + H+L+ER RR++IN +M
Sbjct: 172 KEREKKGRGSTKKSKNESNE----DAEKLPYVHVRARRGQATDSHSLAERARREKINARM 227
Query: 330 RALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
+ LQEL+P CNK S A +LDE I +++SLQ QV+ +SM V
Sbjct: 228 KLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAV 271
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 8/89 (8%)
Query: 287 DVELESAD-------AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
+V +E AD AK++ AKR +A H+L+ER RR++INE+M+ LQ+L+P C
Sbjct: 75 EVSMECADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGC 134
Query: 340 NK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
NK + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 135 NKITGKAMMLDEIINYVQSLQRQIEFLSM 163
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
+DA K+ A+R +A H+L+ER RR++I+E+MR LQ+L+P C+K + KA MLDE
Sbjct: 331 SDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEI 390
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 391 INYVQSLQRQVEFLSMKLATV 411
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
+DA K+ A+R +A H+L+ER RR++I+E+MR LQ+L+P C+K + KA MLDE
Sbjct: 331 SDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEI 390
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 391 INYVQSLQRQVEFLSMKLATV 411
>gi|79331774|ref|NP_001032117.1| transcription factor PIF7 [Arabidopsis thaliana]
gi|9757848|dbj|BAB08482.1| unnamed protein product [Arabidopsis thaliana]
gi|45935023|gb|AAS79546.1| At5g61270 [Arabidopsis thaliana]
gi|46367462|emb|CAG25857.1| hypothetical protein [Arabidopsis thaliana]
gi|332010063|gb|AED97446.1| transcription factor PIF7 [Arabidopsis thaliana]
Length = 278
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 271 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
D R G ET D +E E E+ + G ++ +R RAA +HN SERRRRDRIN++MR
Sbjct: 47 DYFRSGSETQD---TEGDEQET----RGEAGRSNGRRGRAAAIHNESERRRRDRINQRMR 99
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV-VPMMFP 377
LQ+L+P +K+DK S+LD+ IE+LK LQ QVQ MS+ + MM P
Sbjct: 100 TLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIP 147
>gi|32527639|gb|AAP86213.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 277
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 271 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
D R G ET D +E E E+ + G ++ +R RAA +HN SERRRRDRIN++MR
Sbjct: 47 DYFRSGSETQD---TEGDEQET----RGEAGRSNGRRGRAAAIHNESERRRRDRINQRMR 99
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV-VPMMFP 377
LQ+L+P +K+DK S+LD+ IE+LK LQ QVQ MS+ + MM P
Sbjct: 100 TLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIP 147
>gi|62318640|dbj|BAD95106.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 278
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 271 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 330
D R G ET D +E E E+ + G ++ +R RAA +HN SERRRRDRIN++MR
Sbjct: 47 DYFRSGSETQD---TEGDEQET----RGEAGRSNGRRGRAAAIHNESERRRRDRINQRMR 99
Query: 331 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV-VPMMFP 377
LQ+L+P +K+DK S+LD+ IE+LK LQ QVQ MS+ + MM P
Sbjct: 100 TLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIP 147
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
D K+ AKR +A H+L+ER RR +I+E+M+ LQ+L+P CNK + KA MLDE
Sbjct: 128 GDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEI 187
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 188 INYVQSLQRQVEFLSMKLATV 208
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 14/98 (14%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 147 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 206
Query: 364 MMSMGCGVV-------------PMMFPGVQQYMPNMGM 388
+SM V +FP P +GM
Sbjct: 207 FLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGM 244
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 148 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 207
Query: 364 MMSM 367
+SM
Sbjct: 208 FLSM 211
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 3/140 (2%)
Query: 236 SSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRE--TDDEYHSEDVELESA 293
SSG + VTSS G +S + + E+ K + E ++ + + E +++
Sbjct: 99 SSGCNGHDDAKCGVTSSKGFNSKKRKRIGKDCEGEEDKMQKDEQSSNSNVNKTNSEKQAS 158
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAI 352
D+ K A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I
Sbjct: 159 DSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEII 218
Query: 353 EYLKSLQLQVQMMSMGCGVV 372
Y++SLQ Q++ +SM V
Sbjct: 219 NYVQSLQCQIEFLSMKLSAV 238
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
D K++ AKR +A H+L+ER RR +I+E+M+ LQ+L+P CNK + KA MLDE
Sbjct: 128 GDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEI 187
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 188 INYVQSLQRQVEFLSMKLATV 208
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 13/124 (10%)
Query: 262 PPAQKPAAEDRKRKGRETDDEYH-----------SEDVELESADAKK-QSRGSTSAKRSR 309
PP + AE R +K + + DE + EL +ADA+ + A+R +
Sbjct: 203 PPESRETAETRAKKCKLSTDEERKPAAGEGWRGSGKGKELVAADAEPPKDYIHVRARRGQ 262
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMG 368
A + H+L+ER RR++I E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 263 ATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 322
Query: 369 CGVV 372
V
Sbjct: 323 LSTV 326
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 271 DRKRKGRETDDEYHSEDVELES----ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRIN 326
D KR +E H E E A+ KQ A+R +A + H+L+ER RR++I+
Sbjct: 108 DNKRLKTGGSNENHESKAEGEETAKPAEPPKQDYIHVRARRGQATDSHSLAERARREKIS 167
Query: 327 EKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQY 382
E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+ +SM V + PG++ +
Sbjct: 168 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLSPGIEGF 225
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 19/131 (14%)
Query: 256 SSASAEPPAQKPAAEDRKRKGRETDDE------YHSEDVELESADAKKQSRGSTS----- 304
SSA + Q A+ RKRK DD HS+D + + K+ + ST
Sbjct: 60 SSAVLDTYPQGSASVGRKRKASTADDSSATLSSAHSKDCKDGKSRRGKREKSSTDQEEAP 119
Query: 305 -------AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLK 356
A+R +A + H+L+ER RR+RI+E+MR LQ L+P C+K + KA +LDE I Y++
Sbjct: 120 KGYIHVRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQ 179
Query: 357 SLQLQVQMMSM 367
SLQ QV+ +SM
Sbjct: 180 SLQNQVEFLSM 190
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+
Sbjct: 132 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 191
Query: 356 KSLQLQVQMMSMGCGVVPM-MFPGVQQY 382
+SLQ QV+ +SM V M PG++ +
Sbjct: 192 QSLQRQVEFLSMKLEAVNTRMTPGIEAF 219
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 14/98 (14%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 258 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 317
Query: 364 MMSMGCGVV-------------PMMFPGVQQYMPNMGM 388
+SM V +FP P +GM
Sbjct: 318 FLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGM 355
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 15/117 (12%)
Query: 265 QKPAAEDRKRKGRETDDE------YHSEDVELESADAKKQSRGSTS---------AKRSR 309
+K ED+K++G ++E Y+S+ E S +A G+TS A R
Sbjct: 184 RKKKTEDQKKRGENVEEEGQSSISYNSDQEENSSEEANGGGSGATSDGGVNRKSRASRGS 243
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
A + +L R+RR+RINE++R LQ+L+P K D ++ML+EA+ Y+K LQLQ++++S
Sbjct: 244 ATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 300
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 34/250 (13%)
Query: 133 TTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGPSNSKSVTIRESTVVDSSDTPAP 192
T V PP P + P P F + + + R+ST + DT P
Sbjct: 17 TPVDLYPPENPMLGPSPMMDS----FRETLWHDGGFNVHTDADTSFRDSTGLFLQDTQIP 72
Query: 193 -------GPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMC 245
GP + AS+ ++ R+ + + SSGG G D C
Sbjct: 73 SGSKLDNGPLTDASKLVKE-------------RSINNVSEDSQSSGGNG-----HDDAKC 114
Query: 246 EMTVTSSPGGSSASAEPPAQK-PAAEDRKRKGRET-DDEYHSEDVELESADAKKQSRGST 303
T SS G SS + + ED+K+K ++ + + E + +D+ K
Sbjct: 115 GQT--SSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHM 172
Query: 304 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQV 362
A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ Q+
Sbjct: 173 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 232
Query: 363 QMMSMGCGVV 372
+ +SM V
Sbjct: 233 EFLSMKLSAV 242
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 50/192 (26%)
Query: 217 CRNTSGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKG 276
RN + + A +S GGG D M E T S EP ++ ++ RKR G
Sbjct: 251 VRNANESDRAESSDDGGG----QDDSPMLEGT----------SGEPSSKGLNSKKRKRSG 296
Query: 277 RETDDEYHSEDVELESADAK----KQSRGS------------------------------ 302
R+ D++ + EL S AK Q +G
Sbjct: 297 RDGDNDKANGAQELPSEGAKGNSENQQKGDQQPISTANKACGKNAKLGSQASDPPKEEYI 356
Query: 303 -TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQL 360
A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ
Sbjct: 357 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 416
Query: 361 QVQMMSMGCGVV 372
QV+ +SM V
Sbjct: 417 QVEFLSMKLATV 428
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 218 RNTSGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQK-PAAEDRKRKG 276
R+ + + SSGG G D C T SS G SS + + ED+K+K
Sbjct: 143 RSINNVSEDSQSSGGNG-----HDDAKCGQT--SSKGFSSKKRKRIGKDCEEEEDKKQKD 195
Query: 277 RET-DDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQEL 335
++ + + E + +D+ K A+R +A H+L+ER RR++I+E+M+ LQ+L
Sbjct: 196 EQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDL 255
Query: 336 IPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
+P C+K + KA MLDE I Y++SLQ Q++ +SM V
Sbjct: 256 VPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAV 293
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 44/176 (25%)
Query: 226 AATSSGGG-GGSSGARDLTMCEMTVTSSP---GGSSASAEPPA---QKPAAEDRKRKGRE 278
+TSSG G S+G R M ++ +P GGS A E + +KPA E +
Sbjct: 83 VSTSSGSGMNASNGKR------MKISRTPDENGGSKAELEASSVAGEKPAEESKP----- 131
Query: 279 TDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPR 338
A+ KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P
Sbjct: 132 --------------AEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 177
Query: 339 CNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV-----------PMMFPGVQQY 382
CNK KA +LDE I Y++SLQ QV+ +SM V P+ GVQ +
Sbjct: 178 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDLGVQTF 233
>gi|293332391|ref|NP_001168665.1| uncharacterized protein LOC100382453 [Zea mays]
gi|223950025|gb|ACN29096.1| unknown [Zea mays]
gi|414877116|tpg|DAA54247.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 398
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 48/70 (68%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
R++K + + S+D +L+ + G KRSR AEVHNLSERRRRDRINEKMRA
Sbjct: 320 REQKRKSQAECSASQDDDLDDESGGMRGSGGRGTKRSRTAEVHNLSERRRRDRINEKMRA 379
Query: 332 LQELIPRCNK 341
LQELIP CNK
Sbjct: 380 LQELIPNCNK 389
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 30/141 (21%)
Query: 259 SAEPPAQKPAAEDRK-RKGRETDDEYHSEDVELESADAKKQSRGSTS------------- 304
S PP A+ED+ ++G+ +DE ++ S A++ S+ TS
Sbjct: 223 STNPPMDAEASEDQNAKRGKPNEDEGKEKN---GSVKAEEDSKAGTSSGGDEKQNMSSSK 279
Query: 305 ------------AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE
Sbjct: 280 PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 339
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 340 INYVRSLQRQVEFLSMKLSSV 360
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 14/102 (13%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 239 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 298
Query: 364 MMSMGCGVV-PMM------------FPGVQQYMPNMGMGIGM 392
+SM V P + FP P +GM M
Sbjct: 299 FLSMKLAAVNPRLDFNFDNLFAREAFPACSVNFPTIGMSSDM 340
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR RI+E+M+ LQ L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 249 ARRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVE 308
Query: 364 MMSMGCGVVPMMFPGVQQYMPNMGM 388
+SM + QY P+ M
Sbjct: 309 FLSMKLSTMNPQLDLDGQYKPSKDM 333
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KAS+LDE I Y+
Sbjct: 122 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYI 181
Query: 356 KSLQLQVQMMSMGCGVV-PMMFPGVQQYMPNMGMG 389
+SLQ QV+ +SM V M G+ + P+ G
Sbjct: 182 QSLQHQVEFLSMKLEAVNSHMINGIVAF-PSKDFG 215
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 285 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SD 343
S+++ +++++K A+R +A + H+L+ER RR++I++KM+ LQ+L+P CNK +
Sbjct: 169 SKEISKGASESQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTG 228
Query: 344 KASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
KA MLDE I Y++SLQ QV+ +SM V+
Sbjct: 229 KAGMLDEIINYVQSLQRQVEFLSMKLAVL 257
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 31/154 (20%)
Query: 226 AATSSGGGGGSSGARDLTMCEMTVTSSP---GGSSASAEPPA---QKPAAEDRKRKGRET 279
+TSSG G +S + M ++ +P GGS A E + +KPA E +
Sbjct: 98 VSTSSGSGMNASNGK-----RMKISRTPDENGGSKAELEASSVAGEKPAEESKP------ 146
Query: 280 DDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
A+ KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C
Sbjct: 147 -------------AEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 193
Query: 340 NKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
NK KA +LDE I Y++SLQ QV+ +SM V
Sbjct: 194 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 227
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 254 GGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEV 313
GG ++ E AAE G DE ++ E E KQ A+R +A +
Sbjct: 73 GGGGSTVENGGGLKAAEASSVAGSNNSDEQSTKPSESE---PPKQDYIHVRARRGQATDS 129
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 367
H+++ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+ +SM
Sbjct: 130 HSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSM 184
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK---SDKASMLDEAIEYLK 356
R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK +DKASMLDE I+Y+K
Sbjct: 235 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVK 294
Query: 357 SLQLQVQ 363
LQLQV+
Sbjct: 295 FLQLQVK 301
>gi|223946943|gb|ACN27555.1| unknown [Zea mays]
Length = 386
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 48/70 (68%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
R++K + + S+D +L+ + G KRSR AEVHNLSERRRRDRINEKMRA
Sbjct: 315 REQKRKSQAECSASQDDDLDDESGGMRGSGGRGTKRSRTAEVHNLSERRRRDRINEKMRA 374
Query: 332 LQELIPRCNK 341
LQELIP CNK
Sbjct: 375 LQELIPNCNK 384
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 145 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 204
Query: 364 MMSM 367
+SM
Sbjct: 205 FLSM 208
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 13/110 (11%)
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAI 352
+A KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KAS+LDE I
Sbjct: 50 EAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 109
Query: 353 EYLKSLQLQVQMMSMGCGVVPMM-------FP----GVQQY-MPNMGMGI 390
Y+++LQ QV+ +SM V FP G Q Y PN+ G+
Sbjct: 110 NYIQALQRQVEFLSMKLEAVNSRTNSGIEGFPPKDFGAQAYDAPNLAFGL 159
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLD 349
+SAD KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LD
Sbjct: 139 QSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 198
Query: 350 EAIEYLKSLQLQVQMMSM 367
E I Y++SLQ QV+ +SM
Sbjct: 199 EIINYIQSLQRQVEFLSM 216
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLD 349
+SAD KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LD
Sbjct: 139 QSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 198
Query: 350 EAIEYLKSLQLQVQMMSM 367
E I Y++SLQ QV+ +SM
Sbjct: 199 EIINYIQSLQRQVEFLSM 216
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 22/119 (18%)
Query: 268 AAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTS-------------AKRSRAAEVH 314
AED KG+ + +SE+ KKQ + STS A+R A + H
Sbjct: 240 GAEDNSTKGKAA--QSNSEN------GGKKQGKDSTSKPPEPPKDYIHVRARRGEATDSH 291
Query: 315 NLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 292 SLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATV 350
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
E+++++K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 236 ETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 295
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 296 EIINYVQSLQRQVEFLSMKLATV 318
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+
Sbjct: 165 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 224
Query: 356 KSLQLQVQMMSMGCGVV-PMMFPGVQQYMP 384
+SLQ QV+ +SM V + PG++ + P
Sbjct: 225 QSLQRQVEFLSMKLEAVNSRIGPGIEVFPP 254
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 145 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 204
Query: 364 MMSM 367
+SM
Sbjct: 205 FLSM 208
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 374 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 433
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 434 FLSMKLATV 442
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 145 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 204
Query: 364 MMSM 367
+SM
Sbjct: 205 FLSM 208
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 265 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 324
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 325 FLSMKLATV 333
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 374 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 433
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 434 FLSMKLATV 442
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK---SDKASMLDEAIEYLK 356
R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK +DKASMLDE I+Y+K
Sbjct: 247 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVK 306
Query: 357 SLQLQVQ 363
LQLQV+
Sbjct: 307 FLQLQVK 313
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+
Sbjct: 122 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 181
Query: 356 KSLQLQVQMMSMGCGVV-PMMFPGVQQYMPN 385
+SLQ QV+ +SM V + PG++ + P
Sbjct: 182 QSLQRQVEFLSMKLEAVNSRIAPGIEVFPPK 212
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 195 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 254
Query: 364 MMSMGCGVV-PMMF 376
+SM V P+ F
Sbjct: 255 FLSMKLATVNPLDF 268
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 155 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 214
Query: 364 MMSM 367
+SM
Sbjct: 215 FLSM 218
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 138 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 197
Query: 364 MMSMGCGVV-PMMFPGVQQYMP 384
+SM V M PG++ + P
Sbjct: 198 FLSMKLEAVNSRMNPGIEVFPP 219
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
E+++++K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 244 ETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 303
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 304 EIINYVQSLQRQVEFLSMKLATV 326
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
+A +K A+R +A + H+L+ER RR+RI+E+MR LQEL+P C+K + KA MLDE
Sbjct: 139 AAAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDE 198
Query: 351 AIEYLKSLQLQVQMMSM 367
I Y++SLQ QV+ +SM
Sbjct: 199 IINYVQSLQKQVEFLSM 215
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 138 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 197
Query: 364 MMSMGCGVV-PMMFPGVQQYMP 384
+SM V M PG++ + P
Sbjct: 198 FLSMKLEAVNSRMNPGIEVFPP 219
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
E+++++K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 241 ETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 300
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 301 EIINYVQSLQRQVEFLSMKLATV 323
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 11/102 (10%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
RK G++T D +A + K+ A+R +A H+L+ER RR++I+E+M+
Sbjct: 237 RKSSGKQTKD----------NAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKY 286
Query: 332 LQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
LQ+L+P C+K + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 287 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASV 328
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
E+++++K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 617 ETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 676
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 677 EIINYVQSLQRQVEFLSMKLATV 699
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
++++ +K A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLD
Sbjct: 237 KASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLD 296
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 297 EIINYVQSLQRQVEFLSMKLAAV 319
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 187 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVE 246
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 247 FLSMKLAAV 255
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 138 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 197
Query: 364 MMSMGCGVV-PMMFPGVQQYMP 384
+SM V M PG++ + P
Sbjct: 198 FLSMKLEAVNSRMNPGIEVFPP 219
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 169 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 228
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 229 FLSMKLATV 237
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 148 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 207
Query: 364 MMSM 367
+SM
Sbjct: 208 FLSM 211
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 21/119 (17%)
Query: 268 AAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTS-------------AKRSRAAEVH 314
AAE+ KG+ E+ KKQ + S+S A+R A + H
Sbjct: 236 AAEENSGKGKAAQSNS-------ENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSH 288
Query: 315 NLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 289 SLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATV 347
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 388 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 447
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 448 FLSMKLASV 456
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
E+ +++K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 236 ETYESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 295
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 296 EIINYVQSLQRQVEFLSMKLATV 318
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLD 349
+SAD KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LD
Sbjct: 70 QSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 129
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQY 382
E I Y++SLQ QV+ +SM V M G++ +
Sbjct: 130 EIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGF 163
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 17/125 (13%)
Query: 262 PPAQKPAAEDRKRKG-RETDDEYHSEDVELESADAKKQSRGSTS------------AKRS 308
P + ED +KG RE + D E++ +KQ++ ++ A+R
Sbjct: 203 PKRKSEEVEDSGKKGKRENGRGFEEND---ENSAEEKQTKANSKPPEAPKDYIHVRARRG 259
Query: 309 RAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
+A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 260 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSM 319
Query: 368 GCGVV 372
V
Sbjct: 320 KLASV 324
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 12/142 (8%)
Query: 266 KPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRG--STSAKRSRAAEVHNLSERRRRD 323
K E + R+G+ ++ + E +SA + +RG A+R +A + H+L+ER RR+
Sbjct: 102 KQQQESKSRRGKRPHNK--EANTEEKSATEDEATRGYIHVRARRGQATDSHSLAERVRRE 159
Query: 324 RINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCG-VVPMMF----- 376
RI+E+MR LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM + P+++
Sbjct: 160 RISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLD 219
Query: 377 -PGVQQYMPNMGMGIGMGMGMG 397
G+ + MG+ + M
Sbjct: 220 SDGLHDHAQKMGVMFQEALAMA 241
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 192 ARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 251
Query: 364 MMSMGCGVV-PMMF 376
+SM V P+ F
Sbjct: 252 FLSMKLATVNPLDF 265
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 206 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 265
Query: 364 MMSMGCGVV-PMMF 376
+SM V P+ F
Sbjct: 266 FLSMKLATVNPLDF 279
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 387 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 446
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 447 FLSMKLASV 455
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 251 ARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 310
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 311 FLSMKLAAV 319
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+
Sbjct: 68 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 127
Query: 356 KSLQLQVQMMSMGCGVV-PMMFPGVQQY 382
+SLQ QV+ +SM V M PG++ +
Sbjct: 128 QSLQRQVEFLSMKLEAVNTRMNPGIEVF 155
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 254 GGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQS-------RGSTSAK 306
GSS ++ P ++ A E + +K R+ + ED E +++ A+
Sbjct: 108 NGSSFTSNPQSKDTATEGKNKKQRKNNGGLKEEDKAKEEKKDQRKCPEEPPTGYIHVRAR 167
Query: 307 RSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMM 365
R +A + H+L+ER RR++I+E+M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+ +
Sbjct: 168 RGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 227
Query: 366 SMGCGVVPMMF 376
SM V MF
Sbjct: 228 SMKLASVNPMF 238
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I E+M+ LQ L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 260 ARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQRQVE 319
Query: 364 MMSM 367
+SM
Sbjct: 320 FLSM 323
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 206 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 265
Query: 364 MMSMGCGVV-PMMF 376
+SM V P+ F
Sbjct: 266 FLSMKLATVNPLDF 279
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 375 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 434
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 435 FLSMKLAAV 443
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 6/73 (8%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK------SDKASML 348
A Q R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK +DKASML
Sbjct: 277 APAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASML 336
Query: 349 DEAIEYLKSLQLQ 361
DE I+Y+K LQLQ
Sbjct: 337 DEIIDYVKFLQLQ 349
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 50 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVE 109
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 110 FLSMKLATV 118
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 269 AEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEK 328
+++ K GR+ + HS D E A Q A+R +A + H+L+ER RR+RI+E+
Sbjct: 76 SKEAKENGRKRGGKKHSRDQMEEEA---PQGFIHVRARRGQATDSHSLAERVRRERISER 132
Query: 329 MRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
MR LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM
Sbjct: 133 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 172
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 206 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 265
Query: 364 MMSMGCGVV-PMMF 376
+SM V P+ F
Sbjct: 266 FLSMKLATVNPLDF 279
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 374 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 433
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 434 FLSMKLASV 442
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 12/113 (10%)
Query: 282 EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK 341
E+ DV+++ A A AKR +A + H+L+ER RR++I+EKM LQ L+P C+K
Sbjct: 139 EHGGADVDVKEAPA---GYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDK 195
Query: 342 -SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQYMPNMGMGIGM 392
+ KA MLDE I Y++SLQ QV+ +SM + PMM M G+ IGM
Sbjct: 196 VTGKAMMLDEIISYVQSLQNQVEFLSMKLASLNPMM-------MYEFGVDIGM 241
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 24/159 (15%)
Query: 233 GGGSSGARDLTMCEMTVTSSPGG---SSASAEPPAQKPAAEDRK-RKGRETDDEY---HS 285
G + G C T+ SS + Q A++D+K RK RE + HS
Sbjct: 16 GASAHGTPSFLFCHGAATADSASLETSSGVLDTSPQGTASDDKKPRKPREDSASFSSAHS 75
Query: 286 EDVELESADAKKQSRGSTS----------------AKRSRAAEVHNLSERRRRDRINEKM 329
+D + + KK + S A+R +A + H+L+ER RR+RI+E+M
Sbjct: 76 KDSNSKESTKKKGGKRDRSSKEVDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERM 135
Query: 330 RALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
R LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM
Sbjct: 136 RVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 174
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 49/63 (77%), Gaps = 5/63 (7%)
Query: 318 ERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM-----GCGVV 372
+R RR+RI E+M++LQEL+P NK+DKASMLDE I+Y+K LQLQV+++SM G+
Sbjct: 151 QRLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAGMA 210
Query: 373 PMM 375
P++
Sbjct: 211 PLV 213
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+++P CNK KAS+LDE I Y++SLQ QV+
Sbjct: 125 ARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVE 184
Query: 364 MMSMGCGVVPMMFPGVQQYMPNMGMGIG 391
+SM + P G+
Sbjct: 185 FLSMKLEAINAHVSNATVAFPTKDFGVA 212
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+
Sbjct: 41 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 100
Query: 356 KSLQLQVQMMSMGCGVV-PMMFPGVQQYMPN 385
+SLQ QV+ +SM V + PG++ + P
Sbjct: 101 QSLQRQVEFLSMKLEAVNSRIGPGIEVFPPK 131
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 14/83 (16%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 280 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVE 339
Query: 364 MMSM-------------GCGVVP 373
+SM GC VVP
Sbjct: 340 FLSMKLSTVDPRRELDVGCFVVP 362
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
D K+ AKR +A H+L+ER RR +I+E+M+ LQ+L+P C+K + KA MLDE
Sbjct: 136 GDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEI 195
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 196 INYVQSLQRQVEFLSMKLATV 216
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 14/83 (16%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVE 319
Query: 364 MMSM-------------GCGVVP 373
+SM GC VVP
Sbjct: 320 FLSMKLSTVDPRRELDVGCFVVP 342
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
E ADA S+G + A R A + +L R+RR+RINE+++ LQ L+P K D ++ML+E
Sbjct: 204 EVADAGATSKGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEE 263
Query: 351 AIEYLKSLQLQVQMMS 366
A+ Y+K LQLQ++++S
Sbjct: 264 AVHYVKFLQLQIKLLS 279
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
D K+ AKR +A H+L+ER RR +I+E+M+ LQ+L+P C+K + KA MLDE
Sbjct: 130 GDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEI 189
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 190 INYVQSLQRQVEFLSMKLATV 210
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 360 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 419
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 420 FLSMKLASV 428
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y+
Sbjct: 116 KQDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYV 175
Query: 356 KSLQLQVQMMSMGCGVV 372
++LQ QV+ +SM V
Sbjct: 176 QALQCQVEFLSMKLAAV 192
>gi|312281909|dbj|BAJ33820.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 68/99 (68%), Gaps = 6/99 (6%)
Query: 274 RKGRETDDEY-----HSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEK 328
+ R D +Y ++D E + + + ++ G ++ +R RAA +HN SERRRRDRIN++
Sbjct: 126 KTARTGDRDYLLSGSETQDTEGDEQETRGEA-GRSNGRRGRAAAIHNESERRRRDRINQR 184
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
MR LQ+L+P +K+DK S+LD+ IE+LK LQ QVQ MS+
Sbjct: 185 MRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSL 223
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 269 AEDRKRKGRET-DDEYHSEDVELESADAKKQSRGS-----TSAKRSRAAEVHNLSERRRR 322
E++++K E D + +E + E+ K+Q + A+R +A + H+L+ER RR
Sbjct: 90 GENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARR 149
Query: 323 DRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQ 380
++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+ +SM V M PG++
Sbjct: 150 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIE 209
Query: 381 QYMPNMGM 388
+ P M
Sbjct: 210 VFPPKEVM 217
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 66/99 (66%), Gaps = 12/99 (12%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRG--STSAKRSRAAEVHNLSERRRRDRINEKM 329
RKR G++ D E +A+ +++ +G A+R +A + H+LSER RR+RI+E+M
Sbjct: 81 RKRGGKKQDKE---------TAEEEEEPKGYIHVRARRGQATDSHSLSERVRRERISERM 131
Query: 330 RALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
R LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM
Sbjct: 132 RMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFLSM 170
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
++ +A+K+ A++ +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 164 DAGEAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLD 223
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 224 EIINYVQSLQRQVEFLSMKLSAV 246
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+EKM ALQ++IP CNK KA +LDE I Y++SLQ QV+
Sbjct: 155 ARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVE 214
Query: 364 MMSMGCGVV 372
+SM VV
Sbjct: 215 FLSMKLEVV 223
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+EKM ALQ++IP CNK KA +LDE I Y++SLQ QV+
Sbjct: 156 ARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVE 215
Query: 364 MMSMGCGVV 372
+SM VV
Sbjct: 216 FLSMKLEVV 224
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 196 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 255
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 256 FLSMKLATV 264
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 275 KGRETDDEYHSEDVELESADAKKQSRGSTS------AKRSRAAEVHNLSERRRRDRINEK 328
+G+E D + S LE + G+T+ A+R +A + H+L+ER RR++I+E+
Sbjct: 114 EGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVRREKISER 173
Query: 329 MRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMF 376
M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+ +SM + P+ F
Sbjct: 174 MKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPIFF 223
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 196 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 255
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 256 FLSMKLATV 264
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 341 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 400
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 401 FLSMKLASV 409
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 68/114 (59%), Gaps = 13/114 (11%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 331
RK+KG+ +AD + +S A++ +A H+L+ER RR++I+E+M+
Sbjct: 154 RKKKGKGA-----------SAADGESESYIHVRARKGQATNRHSLAERLRREKISERMKL 202
Query: 332 LQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQYM 383
LQ+L+P C K + KA MLDE I Y++SLQ QV+ +SM V P + ++Q +
Sbjct: 203 LQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPQLGLNIKQLL 256
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 17/136 (12%)
Query: 252 SPGGSSASAEPPAQKPAAEDRKRKG--RETDDEYHSEDVELESADAKKQSRGSTS----- 304
SP SS +A K + E+ KG R DE S +E D+K ++
Sbjct: 131 SPASSSLTAS--NSKVSGENGGSKGGKRSKQDEAGSSKNGVEKCDSKGDNKDDAKPPEAP 188
Query: 305 -------AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLK 356
A+R +A + H+L+ER RR++I+E+M LQ+L+P CN+ + KA MLDE I Y++
Sbjct: 189 KDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQ 248
Query: 357 SLQLQVQMMSMGCGVV 372
SLQ QV+ +SM V
Sbjct: 249 SLQRQVEFLSMKLATV 264
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 196 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 255
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 256 FLSMKLATV 264
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 275 KGRETDDEYHSEDVELESADAKKQSRGSTS------AKRSRAAEVHNLSERRRRDRINEK 328
+G+E D + S LE + G+T+ A+R +A + H+L+ER RR++I+E+
Sbjct: 146 EGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVRREKISER 205
Query: 329 MRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMF 376
M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+ +SM + P+ F
Sbjct: 206 MKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPIFF 255
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 127 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 186
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 187 FLSMKLSVI 195
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 137 ARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVE 196
Query: 364 MMSMGCGVV-PMMF 376
+SM V PM++
Sbjct: 197 FLSMKLATVSPMLY 210
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 139 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 198
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 199 FLSMKLSVI 207
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 127 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 186
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 187 FLSMKLSVI 195
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 73/114 (64%), Gaps = 9/114 (7%)
Query: 256 SSASAEPPAQKPAAEDR-KRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVH 314
SSA ++ Q+ + R KR +ET+++ +ED E+ R A+R +A + H
Sbjct: 81 SSAQSKDCKQQESKSKRGKRPNKETEEKSTTED---EATKGYIHVR----ARRGQATDSH 133
Query: 315 NLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
+L+ER RR+RI+E+MR LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM
Sbjct: 134 SLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 187
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KAS+LDE I Y+
Sbjct: 130 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYI 189
Query: 356 KSLQLQVQMMSMGCGVV 372
++LQ QV+ +SM V
Sbjct: 190 QALQRQVEFLSMKLEAV 206
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KAS+LDE I Y+
Sbjct: 128 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYI 187
Query: 356 KSLQLQVQMMSMGCGVV 372
++LQ QV+ +SM V
Sbjct: 188 QALQRQVEFLSMKLEAV 204
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 320 FLSMKLSSV 328
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 187 ARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 246
Query: 364 MMSMGCGVV-PMMF 376
+SM V P+ F
Sbjct: 247 FLSMKLATVNPLDF 260
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KAS+LDE I Y+
Sbjct: 130 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYI 189
Query: 356 KSLQLQVQMMSMGCGVV 372
++LQ QV+ +SM V
Sbjct: 190 QALQRQVEFLSMKLEAV 206
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 303 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 363 FLSMKLSSV 371
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 301 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 360
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 361 FLSMKLSSV 369
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 269 AEDRKRKGRET-DDEYHSEDVELESADAKKQSRGS-----TSAKRSRAAEVHNLSERRRR 322
E++++K E D + +E + E+ K+Q + A+R +A + H+L+ER RR
Sbjct: 96 GENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARR 155
Query: 323 DRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQ 380
++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+ +SM V M PG++
Sbjct: 156 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIE 215
Query: 381 QYMPNMGM 388
+ P M
Sbjct: 216 VFPPKEVM 223
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
+D K+ A+R +A H+L+ER RR++I+E+M+ LQEL+P C+K + KA MLDE
Sbjct: 315 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEI 374
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 375 INYVQSLQRQVEFLSMKLATV 395
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 236 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 295
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 296 FLSMKLAAV 304
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 289 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASM 347
E E +++K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA M
Sbjct: 243 EKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVM 302
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVV 372
LDE I Y++SLQ QV+ +SM V
Sbjct: 303 LDEIINYVQSLQRQVEFLSMKLATV 327
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 21/119 (17%)
Query: 268 AAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTS-------------AKRSRAAEVH 314
AAE+ KG+ E+ KKQ + S+S A+R A + H
Sbjct: 238 AAEENSGKGKAAQSNS-------ENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSH 290
Query: 315 NLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 291 SLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATV 349
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 171 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 230
Query: 364 MMSMGCGVV 372
+SM VV
Sbjct: 231 FLSMKLEVV 239
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 8/119 (6%)
Query: 255 GSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVH 314
GS + + QKP + K G++ + +D K+ A+R +A H
Sbjct: 328 GSPETQQKGDQKPTSTTSKASGKQGKQGS-------QGSDQPKEEYIHVRARRGQATNSH 380
Query: 315 NLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 381 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 439
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAI 352
D KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I
Sbjct: 55 DFPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 114
Query: 353 EYLKSLQLQVQMMSMGCGVV 372
Y++SLQ QV+ +SM V
Sbjct: 115 NYVQSLQRQVEFLSMKLATV 134
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
D K+ AKR +A H+L+ER RR +I+E+M+ LQ+L+P C+K + KA MLDE
Sbjct: 96 GDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEI 155
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 156 INYVQSLQRQVEFLSMKLATV 176
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 303 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 363 FLSMKLSSV 371
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 289 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASM 347
E E +++K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA M
Sbjct: 242 EKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVM 301
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVV 372
LDE I Y++SLQ QV+ +SM V
Sbjct: 302 LDEIINYVQSLQRQVEFLSMKLATV 326
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 289 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASM 347
E E +++K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA M
Sbjct: 232 EKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVM 291
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVV 372
LDE I Y++SLQ QV+ +SM V
Sbjct: 292 LDEIINYVQSLQRQVEFLSMKLATV 316
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 29 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 88
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 89 FLSMKMATV 97
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+
Sbjct: 140 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 199
Query: 356 KSLQLQVQMMSMGCGVVPM---MFPGVQQYMP 384
+SLQ QV+ +SM V M P V+ + P
Sbjct: 200 QSLQRQVEFLSMKLEAVNSRMGMNPTVEGFHP 231
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 203 FLSMKLSVI 211
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 266 KPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRG--STSAKRSRAAEVHNLSERRRRD 323
K E + R+G+ ++ + E +SA + +RG A+R +A + H+L+ER RR+
Sbjct: 102 KQQQESKSRRGKRPHNK--EANTEEKSATEDEATRGYIHVRARRGQATDSHSLAERVRRE 159
Query: 324 RINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
RI+E+MR LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM
Sbjct: 160 RISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 204
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
S D KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE
Sbjct: 430 SKDHAKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDE 489
Query: 351 AIEYLKSLQLQVQMMSM 367
I Y++SLQ QV+ +SM
Sbjct: 490 IINYVQSLQRQVENLSM 506
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 149 ARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 208
Query: 364 MMSMGCGVVPMMF 376
+SM V MF
Sbjct: 209 FLSMKLASVNPMF 221
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 293 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 352
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 353 FLSMKLSSV 361
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 203 FLSMKLSVI 211
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
D K+ AKR +A H+L+ER RR +I+E+M+ LQ+L+P C+K + KA MLDE
Sbjct: 128 GDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEI 187
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 188 INYVQSLQRQVEFLSMKLSTV 208
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 218 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVE 277
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 278 FLSMKLASV 286
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 203 FLSMKLSVI 211
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 203 FLSMKLSVI 211
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KAS+LDE I Y+
Sbjct: 122 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYI 181
Query: 356 KSLQLQVQMM-----SMGCGVVPMMFPGVQQYMPN 385
+SLQ QV+ M + + M V +M N
Sbjct: 182 QSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHMIN 216
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
+D K+ A+R +A H+L+ER RR++I+E+M+ LQEL+P C+K + KA MLDE
Sbjct: 359 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEI 418
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 419 INYVQSLQRQVEFLSMKLATV 439
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 55/75 (73%), Gaps = 3/75 (4%)
Query: 319 RRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPG 378
+RRR +INE+++ LQ+L+P C+KS++AS LD+ I Y+KSLQ QVQ MS+G P ++P
Sbjct: 223 QRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMSVGL-ASPAVYPV 281
Query: 379 VQ-QYMPNMGMGIGM 392
VQ Q MP +G + M
Sbjct: 282 VQPQGMP-LGTPVAM 295
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAI 352
+A KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I
Sbjct: 130 EAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 189
Query: 353 EYLKSLQLQVQMMSM 367
Y++SLQ QV+ +SM
Sbjct: 190 NYIQSLQRQVEFLSM 204
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 355 ARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 414
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 415 FLSMKLATV 423
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
+++D K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 359 QASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 418
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 419 EIINYVQSLQRQVEFLSMKLATV 441
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 203 FLSMKLSVI 211
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
+++D K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 395 QASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 454
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 455 EIINYVQSLQRQVEFLSMKLATV 477
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 371 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 430
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 431 FLSMKLSSV 439
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+++ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ Q++
Sbjct: 171 ARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 230
Query: 364 MMSMGCGVV 372
+SM VV
Sbjct: 231 FLSMKLAVV 239
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 72/119 (60%), Gaps = 9/119 (7%)
Query: 273 KRKGRETDDEYHSEDVELESADAKK----QSRGSTSAKRSRAAEVHNLSERRRRDRINEK 328
++K R H +DV+ ++ +A A+R +A + H+L+ER RR++I+E+
Sbjct: 146 EKKARRVVLHQHDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISER 205
Query: 329 MRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCG-VVPMMF---PGVQQY 382
M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+ +SM + P+M+ PG+ +
Sbjct: 206 MKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLSPLMYEFGPGIDMH 264
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+++ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ Q++
Sbjct: 174 ARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 233
Query: 364 MMSMGCGVV 372
+SM +V
Sbjct: 234 FLSMKLAIV 242
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
+++D K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 209 QASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 268
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 269 EIINYVQSLQRQVEFLSMKLATV 291
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
+++D K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 290 QASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 349
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 350 EIINYVQSLQRQVEFLSMKLATV 372
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KAS+LDE I Y+
Sbjct: 89 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYI 148
Query: 356 KSLQLQVQMMSMGCGVV 372
++LQ QV+ +SM V
Sbjct: 149 QALQRQVEFLSMKLEAV 165
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 42/47 (89%)
Query: 321 RRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 251 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 297
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 256 SSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRG--STSAKRSRAAEV 313
S+A + P + E + R+G+ E E S D + S+G A+R +A +
Sbjct: 86 SAAISSPQPKDCKQESKSRRGKRPRKETE----EKSSTDEDEASKGYIHVRARRGQATDS 141
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
H+L+ER RR+RI+E+MR LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM
Sbjct: 142 HSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLSM 196
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+++ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ Q++
Sbjct: 174 ARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 233
Query: 364 MMSMGCGVV 372
+SM +V
Sbjct: 234 FLSMKLAIV 242
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 32/134 (23%)
Query: 254 GGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTS--------- 304
GGS + +P ++ AA D VEL+ A+K+ +G T+
Sbjct: 111 GGSDSPVKPKVEEVAASDAS--------------VELK---AQKKGKGKTAKPAVEPPKD 153
Query: 305 -----AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSL 358
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SL
Sbjct: 154 YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSL 213
Query: 359 QLQVQMMSMGCGVV 372
Q QV+ +SM V
Sbjct: 214 QQQVEFLSMKLATV 227
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 12/112 (10%)
Query: 290 LESADAK-----KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDK 344
LESAD ++ +G A RS E ++ R+RR+RINE+++ LQ L+P K D
Sbjct: 208 LESADGDGDADARRPKGKGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVDI 267
Query: 345 ASMLDEAIEYLKSLQLQVQMMSMG--CGVVPMMFPGVQQYMPNMGMGIGMGM 394
++ML+EA+ Y+K LQLQ++++S P+ + G+ N+G+GI + M
Sbjct: 268 STMLEEAVHYVKFLQLQIRLLSSDDTWMYAPIAYNGM-----NIGIGIDLNM 314
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
S D K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE
Sbjct: 65 STDGAKEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 124
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 125 IINYVQSLQRQVEFLSMKLAAV 146
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 42/47 (89%)
Query: 321 RRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 298
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 269 AEDRKRKGRET-DDEYHSEDVELESADAKKQSRGS-----TSAKRSRAAEVHNLSERRRR 322
E++++K E D + +E + E+ K+Q + A+R +A + H+L+ER RR
Sbjct: 96 GENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARR 155
Query: 323 DRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQ 380
++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+ +SM V M PG++
Sbjct: 156 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIE 215
Query: 381 QYMPNMGM 388
+ P M
Sbjct: 216 VFPPKEVM 223
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+++ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ Q++
Sbjct: 174 ARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 233
Query: 364 MMSMGCGVV 372
+SM +V
Sbjct: 234 FLSMKLAIV 242
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+++ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ Q++
Sbjct: 174 ARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 233
Query: 364 MMSMGCGVV 372
+SM +V
Sbjct: 234 FLSMKLAIV 242
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
D K+ AKR +A H+L+ER RR +I+E+M+ LQ+L+P C+K + KA MLDE
Sbjct: 137 GDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEI 196
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 197 INYVQSLQRQVEFLSMKLATV 217
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 72/119 (60%), Gaps = 9/119 (7%)
Query: 273 KRKGRETDDEYHSEDVELESADAKK----QSRGSTSAKRSRAAEVHNLSERRRRDRINEK 328
++K R H +DV+ ++ +A A+R +A + H+L+ER RR++I+E+
Sbjct: 146 EKKARRVVLHQHDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISER 205
Query: 329 MRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMF---PGVQQY 382
M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+ +SM + P+M+ PG+ +
Sbjct: 206 MKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLNPLMYEFGPGIDMH 264
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 406 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 465
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 466 FLSMKLATV 474
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 32/134 (23%)
Query: 254 GGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTS--------- 304
GGS + +P ++ AA D VEL+ A+K+ +G T+
Sbjct: 111 GGSDSPVKPKVEEVAASDAS--------------VELK---AQKKGKGKTAKPAVEPPKD 153
Query: 305 -----AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSL 358
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SL
Sbjct: 154 YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSL 213
Query: 359 QLQVQMMSMGCGVV 372
Q QV+ +SM V
Sbjct: 214 QQQVEFLSMKLATV 227
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 32/134 (23%)
Query: 254 GGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTS--------- 304
GGS + +P ++ AA D VEL+ A+K+ +G T+
Sbjct: 111 GGSDSPVKPKVEEVAASDAS--------------VELK---AQKKGKGKTAKPAVEPPKD 153
Query: 305 -----AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSL 358
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SL
Sbjct: 154 YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSL 213
Query: 359 QLQVQMMSMGCGVV 372
Q QV+ +SM V
Sbjct: 214 QQQVEFLSMKLATV 227
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 13/94 (13%)
Query: 287 DVELESADAKKQSRGS------------TSAKRSRAAEVHNLSERRRRDRINEKMRALQE 334
+VE SAD K + S A+R +A + H+L+ER RR+RI+E+M+ LQ+
Sbjct: 65 EVEASSADGSKPDKNSKPAEPPKQDYIHVRARRGQATDSHSLAERARRERISERMKILQD 124
Query: 335 LIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 367
L+P CNK KA +LDE I Y++SLQ QV+ +SM
Sbjct: 125 LVPGCNKVIGKALVLDEIINYIQSLQQQVEFLSM 158
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 32/134 (23%)
Query: 254 GGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTS--------- 304
GGS + +P ++ AA D VEL+ A+K+ +G T+
Sbjct: 111 GGSDSPVKPKVEEVAASDAS--------------VELK---AQKKGKGKTAKPAVEPPKD 153
Query: 305 -----AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSL 358
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SL
Sbjct: 154 YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSL 213
Query: 359 QLQVQMMSMGCGVV 372
Q QV+ +SM V
Sbjct: 214 QQQVEFLSMKLATV 227
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 351
D K+ AKR +A H+L+ER RR +I+E+M+ LQ+L+P C+K + KA MLDE
Sbjct: 21 GDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEI 80
Query: 352 IEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 81 INYVQSLQRQVEFLSMKLSTV 101
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 145 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVE 204
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 205 FLSMKLAAV 213
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+
Sbjct: 140 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 199
Query: 356 KSLQLQVQMMSMGCGVV 372
+SLQ QV+ +SM V
Sbjct: 200 QSLQRQVEFLSMKLEAV 216
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 42/47 (89%)
Query: 321 RRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 298
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQ L+P C+K + KA +LDE I Y++SLQ QV+
Sbjct: 113 ARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVE 172
Query: 364 MMSM 367
+SM
Sbjct: 173 FLSM 176
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 8 ARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE 67
Query: 364 MMSM 367
+SM
Sbjct: 68 FLSM 71
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 18/159 (11%)
Query: 217 CRNTSGAGAAATSSGGG-------GGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAA 269
C T+ A +A+ + G G SSG D C S G+S S+ +
Sbjct: 28 CHGTATADSASLETSSGVLDTSPRGTSSG--DNKACRKHKEDS--GASFSSARSKDSNSK 83
Query: 270 EDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
E KR G + D S+ V+ E R A+R +A + H+L+ER RR+RI+E+M
Sbjct: 84 ESSKRSGGKRDRS--SKKVDEEEPKGYIHVR----ARRGQATDNHSLAERVRRERISERM 137
Query: 330 RALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
R LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM
Sbjct: 138 RVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 176
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 176 ARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 235
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 236 FLSMKLATV 244
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 176 ARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 235
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 236 FLSMKLATV 244
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I++KM+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 192 ARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 251
Query: 364 MMSM 367
+S+
Sbjct: 252 FLSL 255
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQ L+P C+K + KA +LDE I Y++SLQ QV+
Sbjct: 123 ARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVE 182
Query: 364 MMSM 367
+SM
Sbjct: 183 FLSM 186
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 271 DRKRKGRETDDEYHSEDVELESADAKK--------QSRGSTSAKRSRAAEVHNLSERRRR 322
D KG E +HS DV L ++ A + G AKR A + ++ R RR
Sbjct: 402 DHILKGAELRSYFHSGDVGLNASQAMDIIVIGPALNTNGKPRAKRGSATDPQSVYARHRR 461
Query: 323 DRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
++INE+++ LQ L+P K D +MLDEAI Y+K LQ QV+++
Sbjct: 462 EKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELL 504
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
++A + K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 248 DNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLD 307
Query: 350 EAIEYLKSLQLQVQMMSM 367
E I Y++SLQ QV+ +SM
Sbjct: 308 EIINYVQSLQRQVEFLSM 325
>gi|297848442|ref|XP_002892102.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
gi|297337944|gb|EFH68361.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 9/76 (11%)
Query: 317 SERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMF 376
S+RRR D + KMR LQ+L+P C+K+DK S+LD AIEY+KSLQLQ ++MSM
Sbjct: 129 SKRRRSDELCNKMRTLQQLVPDCHKTDKVSVLDNAIEYMKSLQLQFKVMSMM-------- 180
Query: 377 PGVQQYMPNMGMGIGM 392
G+ Y P+ + G+
Sbjct: 181 -GMNPYFPSAILDYGI 195
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I++KM+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 192 ARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 251
Query: 364 MMSM 367
+S+
Sbjct: 252 FLSL 255
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 216 RCRNTSGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRK 275
R N +T++GG G+S A + GG ++ E+ K
Sbjct: 45 RVTNEDSVQCVSTTNGGARGNSNA----------VNDDGGDGKRSKTSGNSKGEENSSGK 94
Query: 276 -GRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQE 334
ET DE H K+ A+R +A + H+L+ER RR++I+E+M+ LQ+
Sbjct: 95 HAEETSDEPHP-----------KKDYIHVRARRGQATDSHSLAERARREKISERMKTLQD 143
Query: 335 LIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMM-FPGVQQYMP 384
L+P CNK KA +LDE I Y++SL QV+ +SM V PG++ + P
Sbjct: 144 LVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSMKLEAVNSRPTPGMEVFPP 195
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 18/113 (15%)
Query: 273 KRKGRETDDEYHSEDVELE-------SADAKKQSRGSTS----------AKRSRAAEVHN 315
KRK ++ E S E E ++ KK++ GS + A+R +A + H+
Sbjct: 85 KRKAPKSKQESRSSGAEEEGTARGGATSKNKKKASGSDAPKETDYIHVRARRGQATDSHS 144
Query: 316 LSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
L+ER RR+RI+E+M+ LQEL+P C+K KAS LDE I Y++SLQ QV+ +SM
Sbjct: 145 LAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFLSM 197
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
++A + K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 248 DNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLD 307
Query: 350 EAIEYLKSLQLQVQMMSM 367
E I Y++SLQ QV+ +SM
Sbjct: 308 EIINYVQSLQRQVEFLSM 325
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 14/142 (9%)
Query: 239 ARDLTMCEMTVTSSPGGSSASAEPPAQKPAAE--DRKRKGRETDDEYHSEDVELESADAK 296
A DLT+ E S+ G S + A+ AAE D K K E D + + SAD
Sbjct: 127 AEDLTLME-NKQSNNGNGDNSNKRKAEFVAAEECDNKIKEVEVDSKVKEKSSIGISADFS 185
Query: 297 KQSRGSTS----------AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKA 345
K+++ +++ A+R +A + H+L+ER RR++I++KM++LQ+L+P CNK + +A
Sbjct: 186 KENQQTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRA 245
Query: 346 SMLDEAIEYLKSLQLQVQMMSM 367
MLDE I Y++SLQ QV+ +SM
Sbjct: 246 GMLDEIINYVQSLQRQVEFLSM 267
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M LQ+L+P CN+ + KA MLDE I Y++SLQ QV+
Sbjct: 193 ARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVE 252
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 253 FLSMKLATV 261
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQ L+P C+K + KA +LDE I Y++SLQ QV+
Sbjct: 122 ARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVE 181
Query: 364 MMSM 367
+SM
Sbjct: 182 FLSM 185
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 36/174 (20%)
Query: 253 PGGSSASAEP------PAQKPAA--------------EDRKRKGRETDDEYHSEDVELES 292
P GS+A+A P PA+ A E + R+G+ ++ + E +S
Sbjct: 69 PQGSAAAASPMERKRKPAEDSATLSSAQSKEDCKQQQESKSRRGKRPHNK--EANTEEKS 126
Query: 293 ADAKKQSRG--STSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
A + +RG A+R +A + H+L+ER RR+RI+E+MR LQ L+P C+K + KA +LD
Sbjct: 127 ATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILD 186
Query: 350 EAIEYLKSLQLQVQMMSMGCG-VVPMMFPGVQQYMPNMGMGIGMGMGMGRAWIW 402
E I Y++SLQ QV+ +SM + P+++ G G+ A +W
Sbjct: 187 EIINYVQSLQNQVEFLSMRIASMSPVLY----------GFGLDSDGLHDHAQVW 230
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 7/114 (6%)
Query: 255 GSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVH 314
G+S S+ + E KR G + D S+ V+ E R A+R +A + H
Sbjct: 69 GASFSSARSKDSNSKESSKRSGGKRDRS--SKKVDEEEPKGYIHVR----ARRGQATDNH 122
Query: 315 NLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
+L+ER RR+RI+E+MR LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM
Sbjct: 123 SLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 176
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 176 ARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVE 235
Query: 364 MMSMGCGVV-PMMF 376
+SM V P+++
Sbjct: 236 FLSMKLASVNPLLY 249
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 282 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 341
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 342 FLSMKLATV 350
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 254 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 313
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 314 FLSMKLATV 322
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNL-SERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
+A A + A AA VH + RR+RI E+M+ALQEL+P NK+DKASMLDE
Sbjct: 112 AAGADQALYNGFGAAGMHAAAVHQPPFGQLRRERIAERMKALQELVPNANKTDKASMLDE 171
Query: 351 AIEYLKSLQLQVQMMSM 367
I+Y+K LQLQV+++SM
Sbjct: 172 IIDYVKFLQLQVKVLSM 188
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 266 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 325
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 326 FLSMKLATV 334
>gi|222617455|gb|EEE53587.1| hypothetical protein OsJ_36829 [Oryza sativa Japonica Group]
Length = 271
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 5/66 (7%)
Query: 332 LQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVP--MMFP--GVQQYMPNMG 387
L EL+ +DKASMLDEAIEYLKSLQLQ+QMM MG G+ P +MFP GV QYM MG
Sbjct: 146 LVELLWCNGHTDKASMLDEAIEYLKSLQLQLQMMWMGGGMAPPAVMFPAAGVHQYMQRMG 205
Query: 388 MGIGMG 393
+GMG
Sbjct: 206 -AVGMG 210
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 266 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 325
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 326 FLSMKLATV 334
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 153 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 212
Query: 364 MMSM 367
+SM
Sbjct: 213 FLSM 216
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 153 ARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 212
Query: 364 MMSM 367
+SM
Sbjct: 213 FLSM 216
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 254 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 313
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 314 FLSMKLATV 322
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 243 ARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 302
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 303 FLSMKLATV 311
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 35 ARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQVE 94
Query: 364 MMSMGCGVV-PMMFPGVQQ 381
+SM V P ++ Q
Sbjct: 95 FLSMKLAAVKPALYTDAYQ 113
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAI 352
D KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I
Sbjct: 60 DLSKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEII 119
Query: 353 EYLKSLQLQVQMMSMGCGVV 372
Y++SLQ Q++ +SM V
Sbjct: 120 NYVQSLQRQIEFLSMKLAAV 139
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+++ER RR++I+E+M+ LQ+L+P CNK KAS+LDE I Y+
Sbjct: 106 KQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYI 165
Query: 356 KSLQLQVQMMSMGCGVV 372
++LQ QV+ +SM V
Sbjct: 166 QALQRQVEFLSMKLEAV 182
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 14/96 (14%)
Query: 291 ESADAKKQSRGSTS-------------AKRSRAAEVHNLSERRRRDRINEKMRALQELIP 337
E+ KKQ + S+S A+R A + H+L+ER RR++I+++M+ LQ+L+P
Sbjct: 49 ENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVP 108
Query: 338 RCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
CNK KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 109 GCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATV 144
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++ LQ QV+
Sbjct: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
Query: 364 MMSMGCGVVPMMFPGVQQYMPNMGM 388
+SM V MF + N M
Sbjct: 245 FLSMKLASVNPMFYDFGMDLDNTFM 269
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
++A + K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 241 DNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLD 300
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 301 EIINYVQSLQRQVEFLSMKLASV 323
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 267 PAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRIN 326
PA E ++G+ + +E D K + A+R +A + H+L+ER RR +IN
Sbjct: 111 PACESGLKRGKNSSGRGKRAMKSIEKEDEKPREVVHVRARRGQATDSHSLAERVRRGKIN 170
Query: 327 EKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 367
E++R LQ+++P C K+ A MLDE I Y++SLQ QV+ +SM
Sbjct: 171 ERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM 212
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+++P CNK KAS+LDE I Y++SLQ QV+
Sbjct: 52 ARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVE 111
Query: 364 MMSMGCGVV 372
+SM +
Sbjct: 112 FLSMKLETI 120
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Query: 255 GSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELES------ADAKKQSRGSTSAKRS 308
G+ SAEP P + ++KG + S+D + +D K+ A+R
Sbjct: 99 GTPQSAEPAKGSP---ETQQKGDQKPTSTTSKDAGKQGKQGSLGSDQPKEEYIHVRARRG 155
Query: 309 RAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
+A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 156 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 215
Query: 368 GCGVV 372
V
Sbjct: 216 KLATV 220
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 271 DRKRKGRETDDEYHSED----------------VELESADAKKQSRG--STSAKRSRAAE 312
DRKRK E D HS+D VE +S + +G A+R +A +
Sbjct: 75 DRKRKAAE--DSAHSKDSCKDGKSRRGKKASKEVEEKSTTEDEPPKGYIHVRARRGQATD 132
Query: 313 VHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
H+L+ER RR+RI+E+MR LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM
Sbjct: 133 SHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 188
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+
Sbjct: 127 KQDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYI 186
Query: 356 KSLQLQVQMMSMGCGVV-PMMFPGVQQYMP 384
+SLQ Q + +SM V M G++ + P
Sbjct: 187 QSLQRQAEFLSMKLEAVNSRMESGIEVFPP 216
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 174 ARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 233
Query: 364 MMSMGCGVVPMMF 376
+SM V MF
Sbjct: 234 FLSMKLASVNPMF 246
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 60 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 119
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 120 FLSMKLAAV 128
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
++A + K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 305 DNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLD 364
Query: 350 EAIEYLKSLQLQVQMMSM 367
E I Y++SLQ QV+ +SM
Sbjct: 365 EIINYVQSLQRQVEFLSM 382
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I KM+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 179 ARRGQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVE 238
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 239 FLSMKLATV 247
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 243 ARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 302
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 303 FLSMKLATV 311
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 173 ARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVE 232
Query: 364 MMSMGCGVVPMMF 376
+SM V MF
Sbjct: 233 FLSMKLASVNPMF 245
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAI 352
D KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I
Sbjct: 67 DLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 126
Query: 353 EYLKSLQLQVQMMSMGCGVV 372
Y++SLQ Q++ +SM V
Sbjct: 127 NYVQSLQRQIEFLSMKLAAV 146
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++ LQ QV+
Sbjct: 170 ARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE 229
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 230 FLSMKLAVL 238
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Query: 249 VTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVEL-ESADAKKQSRGSTSAKR 307
V + GG + AQK +++ R + S ++ ++A + K+ A+R
Sbjct: 313 VKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARR 372
Query: 308 SRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMS 366
+A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+ +S
Sbjct: 373 GQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 432
Query: 367 M 367
M
Sbjct: 433 M 433
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
++A + K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 237 DNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLD 296
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV 372
E I Y++SLQ QV+ +SM V
Sbjct: 297 EIINYVQSLQRQVEFLSMKLASV 319
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+LIP CNK KA +LDE I Y++SLQ QV+
Sbjct: 142 ARRGQATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQVE 201
Query: 364 MMSMGCGVV 372
+SM +V
Sbjct: 202 FLSMKLEIV 210
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+++P CNK KA +LDE I Y+
Sbjct: 131 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYI 190
Query: 356 KSLQLQVQMMSMGCGVV 372
+SLQ QV+ +SM V
Sbjct: 191 QSLQRQVEFLSMKLEAV 207
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 158 ARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 217
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 218 FLSMKLATV 226
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
++ A K++ A+R RAA H+L+ER RR++I+E+M+ LQ+L+P C++ + K +LD
Sbjct: 193 QNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLD 252
Query: 350 EAIEYLKSLQLQVQMMSMGCGVVPM 374
E I Y++SLQ QV+++SM V +
Sbjct: 253 EIINYVQSLQQQVELLSMKLASVGL 277
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 272 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 331
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 332 FLSMKLATV 340
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+++P CNK KA +LDE I Y+
Sbjct: 94 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYI 153
Query: 356 KSLQLQVQMMSMGCGVV 372
+SLQ QV+ +SM V
Sbjct: 154 QSLQHQVEFLSMKLEAV 170
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 12/123 (9%)
Query: 265 QKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
QKPAA G D + ++V E + R A+R +A + H+L+ER RR++
Sbjct: 211 QKPAA------GEAWHDNSNGKEVAAEPSKDYIHVR----ARRGQATDSHSLAERVRREK 260
Query: 325 INEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQY 382
I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+ +SM V P + V
Sbjct: 261 ISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLKLDVDSC 320
Query: 383 MPN 385
+P
Sbjct: 321 IPK 323
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 158 ARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 217
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 218 FLSMKLATV 226
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I E+M+ LQ+L+P CNK KAS+LDE I Y+
Sbjct: 108 KQDYIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYV 167
Query: 356 KSLQLQVQMMSMGCGVV 372
++L+ QV+ +SM V
Sbjct: 168 QALERQVEFLSMKLEAV 184
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 153 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 212
Query: 364 MMSM 367
+SM
Sbjct: 213 FLSM 216
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++ LQ QV+
Sbjct: 187 ARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE 246
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 247 FLSMKLAVL 255
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 158 ARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 217
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 218 FLSMKLATV 226
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++ LQ QV+
Sbjct: 187 ARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE 246
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 247 FLSMKLAVL 255
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 160 ARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 219
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 220 FLSMKLATV 228
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 11/101 (10%)
Query: 273 KRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 332
K G++T D +A + K+ A+R +A H+L+ER RR++I+E+M+ L
Sbjct: 239 KSSGKQTKD----------NAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYL 288
Query: 333 QELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
Q L+P C K + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 289 QNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASV 329
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++ LQ QV+
Sbjct: 187 ARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE 246
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 247 FLSMKLAVL 255
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 279 TDDEYHSEDVELESADAKKQS----RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQE 334
+DDE + D L D + G T A R A + +L R+RR+RINE++R LQ
Sbjct: 209 SDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQH 268
Query: 335 LIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
L+P K D ++ML+EA++Y+K LQLQ++++S
Sbjct: 269 LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 300
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN++M+ LQEL+P CNK S A +LDE I +++SLQ QV+
Sbjct: 179 ARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQCQVE 238
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 239 FLSMRLAAV 247
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 279 TDDEYHSEDVELESADAKKQS----RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQE 334
+DDE + D L D + G T A R A + +L R+RR+RINE++R LQ
Sbjct: 209 SDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQH 268
Query: 335 LIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
L+P K D ++ML+EA++Y+K LQLQ++++S
Sbjct: 269 LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 300
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++ LQ QV+
Sbjct: 187 ARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE 246
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 247 FLSMKLAVL 255
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 174 ARRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 233
Query: 364 MMSMGCGVVPMMF 376
+SM V +F
Sbjct: 234 FLSMKLASVNPLF 246
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 93 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
Query: 364 MMSMGCGVVPMMF 376
+SM V F
Sbjct: 153 FLSMKLEAVNSRF 165
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I E+M+ LQ+L+P CNK + KA M+DE I Y++SLQ QV+
Sbjct: 220 ARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQVE 279
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 280 FLSMKLEAV 288
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 166 ARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVE 225
Query: 364 MMSMGCGVV-PMMF 376
+SM + PM +
Sbjct: 226 FLSMKLASLNPMYY 239
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
++ A K++ A+R RAA H+L+ER RR++I+E+M+ LQ+L+P C++ + K +LD
Sbjct: 193 QNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLD 252
Query: 350 EAIEYLKSLQLQVQMMSMGCGVVPM 374
E I Y++SLQ QV+ +SM V +
Sbjct: 253 EIINYVQSLQQQVEFLSMKLASVGL 277
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y+
Sbjct: 67 KQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 126
Query: 356 KSLQLQVQMMSMGCGVV 372
+SLQ Q++ +SM V
Sbjct: 127 QSLQRQIEFLSMKLAAV 143
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
S G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA+ Y+K L
Sbjct: 260 SNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFL 319
Query: 359 QLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGMGMGM 396
QLQ++++S + Y P G+ +G+ +
Sbjct: 320 QLQIKLLSS---------DDLWMYAPFAHNGLDIGLNL 348
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 63/92 (68%), Gaps = 11/92 (11%)
Query: 292 SADAKKQSRGSTS----------AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK 341
SAD+ K+++ +++ A+R +A + H+L+ER RR++I++KM+ LQ+L+P CNK
Sbjct: 16 SADSSKENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNK 75
Query: 342 -SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
+ +A MLDE I Y++SLQ QV+ +SM V
Sbjct: 76 ITGRAGMLDEIINYVQSLQRQVEFISMKLAAV 107
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
A S G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA+ Y
Sbjct: 279 AALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHY 338
Query: 355 LKSLQLQVQMMSMG--CGVVPMMFPGVQQYMPNMGMGI 390
+K LQLQ++++S P+ + G+ + N+ I
Sbjct: 339 VKFLQLQIKLLSSDDMWMYAPIAYNGMDIGLQNLHQKI 376
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
A S G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA+ Y
Sbjct: 279 AALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHY 338
Query: 355 LKSLQLQVQMMSMG--CGVVPMMFPGVQQYMPNMGMGI 390
+K LQLQ++++S P+ + G+ + N+ I
Sbjct: 339 VKFLQLQIKLLSSDDMWMYAPIAYNGMDIGLQNLHQKI 376
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR+RI+E+MR LQEL+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 148 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 207
Query: 364 M 364
+
Sbjct: 208 V 208
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C K + KA MLDE I Y+
Sbjct: 382 KQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYV 441
Query: 356 KSLQLQVQMMSMGCGVV 372
+SLQ QV+ +SM V
Sbjct: 442 QSLQRQVESLSMKVASV 458
>gi|147845457|emb|CAN83346.1| hypothetical protein VITISV_042277 [Vitis vinifera]
Length = 489
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 325 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
INEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQ + +
Sbjct: 196 INEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQNLEL 238
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
S +A+K A+R +A + H+L+ER RR++IN +M+ LQEL+P CNK S A +LDE
Sbjct: 186 SEEAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDE 245
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I +++SLQ QV+ +SM V
Sbjct: 246 IISHVQSLQRQVEFLSMRLAAV 267
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y+
Sbjct: 10 KQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 69
Query: 356 KSLQLQVQMMSMGCGVV 372
+SLQ QV+ +SM V
Sbjct: 70 QSLQRQVEFLSMKLAAV 86
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+++P CNK + KA +LDE I Y++SLQ QV+
Sbjct: 143 ARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVE 202
Query: 364 MMSMGCGVVPM 374
+SM V +
Sbjct: 203 FLSMKLEAVNL 213
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y+
Sbjct: 48 KQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYV 107
Query: 356 KSLQLQVQMMSMGCGVV 372
+SLQ QV+ +SM V
Sbjct: 108 QSLQRQVESLSMKLASV 124
>gi|3193326|gb|AAC19308.1| contains similarity to transcriptional activators such as Ra-like
and myc-like regulatory R proteins [Arabidopsis
thaliana]
gi|7267092|emb|CAB80763.1| putative transcriptional regulator [Arabidopsis thaliana]
Length = 329
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 40/47 (85%)
Query: 320 RRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
+RRD+IN++M+ LQ+L+P +K+DKASMLDE IEYLK LQ QV MMS
Sbjct: 154 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 200
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C++ + KA +LDE I Y++SLQ QV+
Sbjct: 147 ARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQVE 206
Query: 364 MMSMGCGVV-PMMF 376
+SM V P+ F
Sbjct: 207 FLSMKLASVNPIFF 220
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%)
Query: 285 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDK 344
SE+ LE + T A R A + +L R+RR+RINE++R LQ L+P K D
Sbjct: 169 SEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDI 228
Query: 345 ASMLDEAIEYLKSLQLQVQMMS 366
++ML+EA++Y+K LQLQ++++S
Sbjct: 229 STMLEEAVQYVKFLQLQIKLLS 250
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%)
Query: 285 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDK 344
SE+ LE + T A R A + +L R+RR+RINE++R LQ L+P K D
Sbjct: 169 SEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDI 228
Query: 345 ASMLDEAIEYLKSLQLQVQMMS 366
++ML+EA++Y+K LQLQ++++S
Sbjct: 229 STMLEEAVQYVKFLQLQIKLLS 250
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I KM+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 70 ARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVE 129
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 130 FLSMKLSTV 138
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 131 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVE 190
Query: 364 MMS 366
+S
Sbjct: 191 FLS 193
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 18/138 (13%)
Query: 268 AAEDRKRKGRETDDEYHS-------EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERR 320
++D+ G ++DE +S E L D+ + G + + R A + +L R+
Sbjct: 182 GSQDQTLSGYCSEDESNSSHEPRGRESSSLSLNDSAAKLSGKSRSSRGPATDPQSLYARK 241
Query: 321 RRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQ 380
RR+RINE+++ LQ L+P K D ++ML+EA++Y+K LQLQ++++S
Sbjct: 242 RRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSD---------DTW 292
Query: 381 QYMP--NMGMGIGMGMGM 396
Y P GM IG+ +G+
Sbjct: 293 MYSPIAYNGMNIGLELGI 310
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 285 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDK 344
SED E + T A R A + +L R+RR+RINE++R LQ+L+P K D
Sbjct: 172 SEDGNFEGNTNSSTKKAYTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKVDI 231
Query: 345 ASMLDEAIEYLKSLQLQVQMMSMG--CGVVPMMFPGVQQYMPNMGMGI 390
++ML+EA +Y+K LQLQ++++S P+ + G+ + N+ + I
Sbjct: 232 STMLEEAAQYVKFLQLQIKLLSSDDTWMYAPIAYNGIN--ISNVDLNI 277
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M LQ+L+P CNK KA +LDE I Y+
Sbjct: 78 KQDYIHVRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYI 137
Query: 356 KSLQLQVQMMSMGCGVV 372
+SLQ QV+ +SM V
Sbjct: 138 QSLQCQVEFLSMKLEAV 154
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
A S G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA++Y
Sbjct: 256 ATLNSSGKTRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQY 315
Query: 355 LKSLQLQVQMMS 366
+K LQLQ++++S
Sbjct: 316 VKFLQLQIKLLS 327
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 16/96 (16%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK---------------SDKASMLD 349
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLD
Sbjct: 147 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLD 206
Query: 350 EAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQYMP 384
E I Y++SLQ QV+ +SM V P + V ++P
Sbjct: 207 EIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIP 242
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
++R +A + H+L+ER RR+RI E+M+ LQ+L+P CNK KA LDE I Y++SLQ QV+
Sbjct: 145 SRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVE 204
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 205 FLSMKLEAV 213
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 155 ARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVE 214
Query: 364 MMSMGC-GVVPMMF 376
+SM + PM +
Sbjct: 215 FLSMKLTSLNPMYY 228
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I++KM+ LQ+++P C K + KA MLDE I Y++SLQ QV+
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 364 MMSMGCGVV 372
+SM V+
Sbjct: 203 FLSMKLSVL 211
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M LQ+L+P C+K + KA +L+E I Y++SLQ QV+
Sbjct: 121 ARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVE 180
Query: 364 MMSMGCGVV-PMMF 376
+SM V PM+F
Sbjct: 181 FLSMKLASVNPMLF 194
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
G A R A E +L R+RR+RINE++R LQ L+P K D ++ML+EA+EY+K LQL
Sbjct: 208 GKAKADRRSATESQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQL 267
Query: 361 QVQMMS 366
Q++++S
Sbjct: 268 QIKLLS 273
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L P CNK KA +LDE I Y++SLQ QV+
Sbjct: 116 ARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQRQVE 175
Query: 364 MMSM 367
+SM
Sbjct: 176 FLSM 179
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 295 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 354
A S G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA+ Y
Sbjct: 85 AALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHY 144
Query: 355 LKSLQLQVQMMS 366
+K LQLQ++++S
Sbjct: 145 VKFLQLQIKLLS 156
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y+
Sbjct: 19 KQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYV 78
Query: 356 KSLQLQVQMMSMGCGVV 372
+SLQ Q++ +SM V
Sbjct: 79 QSLQRQIEFLSMKLAAV 95
>gi|414864922|tpg|DAA43479.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 423
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 286 EDVELE-SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK 341
+DVE E S + K + + +R+RAAEVHNLSERRRRDRI EKMR LQELIP CNK
Sbjct: 363 QDVECEESTEETKPWQRNGPKRRTRAAEVHNLSERRRRDRIKEKMRVLQELIPHCNK 419
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
S G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA+ Y+K L
Sbjct: 257 SNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFL 316
Query: 359 QLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGMGMGM 396
QLQ++++S + Y P G+ +G+ +
Sbjct: 317 QLQIKLLSSD---------DLWMYAPLAYNGLDIGLNL 345
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRC-NKSDKASMLDEAIEYLKSLQLQVQM 364
+ AA HNL+E+RRR +I E+ R LQ L+P C NKS++AS LD+ I+Y+KSLQ Q++
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 251
Query: 365 MS-MGCGVVPMMFPGV---QQYM 383
S +G +++P Q YM
Sbjct: 252 TSAVGSPAAAVLYPAAVHPQSYM 274
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRC-NKSDKASMLDEAIEYLKSLQLQVQM 364
+ AA HNL+E+RRR +I E+ R LQ L+P C NKS++AS LD+ I+Y+KSLQ Q++
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 138
Query: 365 MS-MGCGVVPMMFPGV---QQYM 383
S +G +++P Q YM
Sbjct: 139 TSAVGSPAAAVLYPAAVHPQSYM 161
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 13/116 (11%)
Query: 262 PPAQKPAAEDRKRKGRETDDEYHS-----------EDVELESADAKK-QSRGSTSAKRSR 309
PP + AE R +K + + DE + EL +ADA+ + A+R +
Sbjct: 203 PPESRETAETRAKKCKLSTDEERKPAAGEGWRGSGKGKELVAADAEPPKDYIHVRARRGQ 262
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 364
A + H+L+ER RR++I E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV++
Sbjct: 263 ATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEV 318
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + HNL+ER RR +INEK+R LQ ++P C K+ A MLDE I Y++SLQ QV+
Sbjct: 153 ARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQVE 212
Query: 364 MMSM 367
+S+
Sbjct: 213 FLSL 216
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+E+M+ LQ+++P CNK KA +LDE I Y+
Sbjct: 94 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYI 153
Query: 356 KSLQLQVQMMSM 367
+SLQ QV+ + M
Sbjct: 154 QSLQHQVEFLFM 165
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
AKR +A + H+L+ER RR++INEK+R LQ+L+P C K+ A MLD I Y++SLQ Q++
Sbjct: 125 AKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIE 184
Query: 364 MMSM 367
+SM
Sbjct: 185 FLSM 188
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
AKR +A + H+L+ER RR++INEK+R LQ+L+P C K+ A MLD I Y++SLQ Q++
Sbjct: 121 AKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIE 180
Query: 364 MMSM 367
+SM
Sbjct: 181 FLSM 184
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 256 SSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHN 315
SSA++ P + ++ + GR + +S + D K AKR +A + H+
Sbjct: 92 SSANSTPAVSESGSKTKNSSGRGKRVKRNSIE------DKKPNEVVHVRAKRGQATDSHS 145
Query: 316 LSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 367
L+ER RR +INEK+R LQ ++P C K+ A MLDE I Y++SLQ QV+ +SM
Sbjct: 146 LAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSM 198
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDE 350
S A KQ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LD
Sbjct: 88 SEQAPKQDYIHVRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDG 147
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I Y++SLQ QV+ +SM V
Sbjct: 148 IINYVQSLQRQVEFLSMKLEAV 169
>gi|224063497|ref|XP_002301173.1| predicted protein [Populus trichocarpa]
gi|222842899|gb|EEE80446.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 86/182 (47%), Gaps = 41/182 (22%)
Query: 224 GAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEY 283
G + T G G G+SG S PGG ++ KR+G +D+
Sbjct: 62 GRSGTECGAGAGNSGVN---------LSDPGGYYVKGVVD-NAVSSGISKRRGASVEDDL 111
Query: 284 --HSEDVELESADAKKQSRG---STSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPR 338
S D E + A+ Q+ +S+KRSRAAEVHNLSE
Sbjct: 112 GDFSCDSEKGAEVAEVQANAVRPRSSSKRSRAAEVHNLSE-------------------- 151
Query: 339 CNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMFPGVQQYM--PNMGMGIGMGM 394
K+DKASMLDEAIEYLK LQLQVQM++M G + PM PG Q M P GM G
Sbjct: 152 --KTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLHPMCLPGALQPMQPPLSGMSFDEGN 209
Query: 395 GM 396
G+
Sbjct: 210 GL 211
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
AKR +A + H+L+ER RR++INEK+R LQ+L+P C K+ A MLD I Y++SLQ Q++
Sbjct: 142 AKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIE 201
Query: 364 MMSM 367
+SM
Sbjct: 202 FLSM 205
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
S D +K +R +A + H+L+ER RR++IN +M+ LQEL+P C+K S A +LDE
Sbjct: 189 SGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDE 248
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I +++SLQ QV+++SM V
Sbjct: 249 IINHVQSLQRQVEILSMKLAAV 270
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 285 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDK 344
SED E + A R A E +L R+RR+RINE++R LQ L+P K D
Sbjct: 176 SEDGNFEGNTNSSSKKTCARASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKVDI 235
Query: 345 ASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGMG 393
++ML+EA +Y+K LQLQ++++S C M Y P GI +G
Sbjct: 236 STMLEEAAQYVKFLQLQIKLLS--CDDTWM-------YAPIAYNGINIG 275
>gi|449441077|ref|XP_004138310.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 321
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 294 DAKKQSRGSTSAKRSRAAEV-HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
+ K ++ GS S +R+R A + HN ERRRRDRIN++M+ LQ+L+P +K+D+AS+LD+ I
Sbjct: 155 NMKGKTDGSCSNRRTRTAAINHNQYERRRRDRINQRMKDLQKLVPNGSKTDRASLLDDTI 214
Query: 353 EYLKSLQLQVQMMSMGCGVVPMM 375
+YLK LQ QVQ M VP M
Sbjct: 215 QYLKQLQAQVQFMDSIRSAVPQM 237
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 250 TSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSR 309
T+ G SSA++ P + ++ + GR + + +E D K A+R +
Sbjct: 103 TNMSGPSSANSTPSVSESESKIKNCSGRGKRVKKNM----MEEEDKKSTQVVHVRARRGQ 158
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 367
A + H+L+ER RR +INEK++ LQ ++P C K+ A MLDE I Y++SLQ QV+ +SM
Sbjct: 159 ATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSM 217
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR +INE++R LQ+++P C KS A+MLDE I Y++SLQ QV+
Sbjct: 150 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQVE 209
Query: 364 MMSM 367
++SM
Sbjct: 210 LLSM 213
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR +INE++R LQ+++P C K+ A+MLDE I Y++SLQ QV+
Sbjct: 1030 ARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVE 1089
Query: 364 MMSM 367
+SM
Sbjct: 1090 FLSM 1093
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
S D +K +R +A + H+L+ER RR++IN +M+ LQEL+P C+K S A +LDE
Sbjct: 195 SGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDE 254
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I +++SLQ QV+++SM V
Sbjct: 255 IINHVQSLQRQVEILSMKLAAV 276
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 286 EDVELESADAKK--QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD 343
ED + DA K G T A R A + +L R+RR+RINE++R LQ L+P K D
Sbjct: 246 EDSSSKEDDASKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD 305
Query: 344 KASMLDEAIEYLKSLQLQVQMMS 366
++ML+EA+ Y+K LQLQ++++S
Sbjct: 306 ISTMLEEAVHYVKFLQLQIKLLS 328
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
ESAD +G A R + + +L R+RR+RINE+++ LQ L+P K D ++ML+E
Sbjct: 203 ESADTGVCPKGKARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKVDMSTMLEE 262
Query: 351 AIEYLKSLQLQVQMMSMG--CGVVPMMFPGVQQYMPNMGMGIGM 392
A+ Y+K LQLQ++++S P+ + G+ N+G+ + M
Sbjct: 263 AVHYVKFLQLQIKVLSSDDMWMYAPLAYNGM-----NIGLDLNM 301
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
S+G A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA++Y+K L
Sbjct: 233 SKGKARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFL 292
Query: 359 QLQVQMMS 366
QLQ++++S
Sbjct: 293 QLQIKLLS 300
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAI 352
D K + A+R +A + H+L+ER RR +INE++R LQ+++P C K+ A MLDE I
Sbjct: 147 DGKPKDVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEII 206
Query: 353 EYLKSLQLQVQMMSM 367
Y++SLQ QV+ +SM
Sbjct: 207 NYVQSLQNQVEFLSM 221
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA+ Y+K LQL
Sbjct: 264 GKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQL 323
Query: 361 QVQMMS 366
Q++++S
Sbjct: 324 QIKLLS 329
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
S G T A + A + +L R+RR+RINE++R LQ L+P K D ++ML+EA++Y+K L
Sbjct: 220 SSGKTRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFL 279
Query: 359 QLQVQMMS 366
QLQ++++S
Sbjct: 280 QLQIKLLS 287
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 14/101 (13%)
Query: 268 AAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINE 327
E R +KG D E E V + A+R +A + H+++ER RR +INE
Sbjct: 131 GKEKRSKKGDTNDGEKPREVVHVR-------------ARRGQATDSHSVAERIRRGKINE 177
Query: 328 KMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 367
++R LQ+++P C K+ A MLDE I Y++SLQ QV+ +SM
Sbjct: 178 RLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM 218
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR +INE++R LQ+++P C K+ A+MLDE I Y++SLQ QV+
Sbjct: 147 ARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVE 206
Query: 364 MMSM 367
+SM
Sbjct: 207 FLSM 210
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA+ Y+K LQL
Sbjct: 261 GKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQL 320
Query: 361 QVQMMSMG--CGVVPMMFPGV 379
Q++++S P+ F G+
Sbjct: 321 QIKLLSSDDLWMYAPIAFNGM 341
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
DA G T A R A + ++ R+RR+RINE++R LQ L+P K D ++ML+EA+
Sbjct: 197 GDAALNLNGKTRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVDISTMLEEAV 256
Query: 353 EYLKSLQLQVQMMS 366
Y+K LQLQ++++S
Sbjct: 257 HYVKFLQLQIKLLS 270
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR +INE++R LQ+++P C K+ A+MLDE I Y++SLQ QV+
Sbjct: 1041 ARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVE 1100
Query: 364 MMSM 367
+SM
Sbjct: 1101 FLSM 1104
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA+ Y+K LQL
Sbjct: 264 GKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQL 323
Query: 361 QVQMMSMG--CGVVPMMFPGV 379
Q++++S P+ F G+
Sbjct: 324 QIKLLSSDDLWMYAPIAFNGM 344
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 253 PGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAE 312
P SSA++ P + ++ + GR S E E A R A+R +A +
Sbjct: 112 PETSSANSTPAVSESGSKIKHSSGR--GKRVKSNVTEEEKAKEVVHVR----ARRGQATD 165
Query: 313 VHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 367
H+L+ER RR +INEK+R LQ ++P C K+ A MLDE I Y++SLQ QV+ +S+
Sbjct: 166 SHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSL 221
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAI 352
D K AKR +A + H+L+ER RR +INEK+R LQ ++P C K+ A MLDE I
Sbjct: 118 DKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEII 177
Query: 353 EYLKSLQLQVQMMSM 367
Y++SLQ QV+ +SM
Sbjct: 178 NYVQSLQHQVEFLSM 192
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
AKR +A + H+++ER RR++IN K+R LQ+L+P C+KS A ML+E I Y+ SLQ QV+
Sbjct: 151 AKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQVE 210
Query: 364 MMSM 367
+SM
Sbjct: 211 FLSM 214
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+++M LQ L+P C+K + KA +LDE I Y++SLQ QV+
Sbjct: 140 ARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVE 199
Query: 364 MMSMGCGVV-PMMF 376
+SM V PM F
Sbjct: 200 FLSMKLASVNPMFF 213
>gi|77556450|gb|ABA99246.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|218187186|gb|EEC69613.1| hypothetical protein OsI_38987 [Oryza sativa Indica Group]
gi|222617411|gb|EEE53543.1| hypothetical protein OsJ_36752 [Oryza sativa Japonica Group]
Length = 265
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%)
Query: 311 AEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
AE H L+E+RRR RINEK + LQ L+P C+K ++S LD I Y+KSLQ Q+Q M
Sbjct: 154 AETHGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSSTLDRTIHYMKSLQQQLQAM 208
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 290 LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
L S D + SRGS A + +L R+RR+RINE+++ LQ L+P K D ++ML+
Sbjct: 253 LNSKDKARASRGS-------ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLE 305
Query: 350 EAIEYLKSLQLQVQMMS 366
EA+EY+K LQLQ++++S
Sbjct: 306 EAVEYVKFLQLQIKLLS 322
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
S D +K +R +A + H+L+ER RR++IN +M+ LQEL+P CNK S A +LD+
Sbjct: 177 SGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDK 236
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I +++SLQ +V+++SM V
Sbjct: 237 IINHVQSLQNEVEILSMKLAAV 258
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 279 TDDEYHSEDVELESADAKKQS----RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQE 334
+DDE + D L D + G T A R A + +L R+RR+RINE++R LQ
Sbjct: 209 SDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQH 268
Query: 335 LIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
L+P K ++ML+EA++Y+K LQLQ++++S
Sbjct: 269 LVPNGTKVHISTMLEEAVQYVKFLQLQIKLLS 300
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 253 PGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAE 312
P SSA++ P + ++ + GR S E E A R A+R +A +
Sbjct: 111 PETSSANSTPAVSESGSKIKHSSGR--GKRVKSNVTEEEKAKEVVHVR----ARRGQATD 164
Query: 313 VHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 367
H+L+ER RR +INEK+R LQ ++P C K+ A MLDE I Y++SLQ QV+ +S+
Sbjct: 165 SHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSL 220
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M+ LQEL+P C+K A +LDE I +++SLQ QV+
Sbjct: 206 ARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVE 265
Query: 364 MMSMGCGVV 372
M+SM V
Sbjct: 266 MLSMRLAAV 274
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M+ LQEL+P C+K A +LDE I +++SLQ QV+
Sbjct: 206 ARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVE 265
Query: 364 MMSMGCGVV 372
M+SM V
Sbjct: 266 MLSMRLAAV 274
>gi|115483366|ref|NP_001065353.1| Os10g0556200 [Oryza sativa Japonica Group]
gi|14165335|gb|AAK55467.1|AC069300_22 putative DNA-binding protein [Oryza sativa Japonica Group]
gi|31433458|gb|AAP54971.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113639885|dbj|BAF27190.1| Os10g0556200 [Oryza sativa Japonica Group]
Length = 191
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 317 SERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
+ +RRDRIN+KM+ LQ+L+P +K+DKASMLDE I+YLK LQ QVQ+
Sbjct: 9 NNHKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQV 56
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 13/100 (13%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
++SR +T A A + +L R+RR+RINE++R LQ L+P K D ++ML+EA++Y+K
Sbjct: 262 RKSRATTGA----ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVK 317
Query: 357 SLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGMGMGM 396
LQLQ++++S + Y P GI +G+ +
Sbjct: 318 FLQLQIKLLSSD---------DLWMYAPIAYNGINIGLDL 348
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 290 LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
L S D + SRGS A + +L R+RR+RINE+++ LQ L+P K D ++ML+
Sbjct: 249 LNSKDKARASRGS-------ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLE 301
Query: 350 EAIEYLKSLQLQVQMMS 366
EA+EY+K LQLQ++++S
Sbjct: 302 EAVEYVKFLQLQIKLLS 318
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 245 CEMTVTSSPGGSSASA-----EPPA-QKPAAEDRKRKGRETDDEYHSEDVELESADAKKQ 298
C + SPG S A EP A Q PA KR R D E+++A AKKQ
Sbjct: 134 CNFGLIVSPGSSPDDAGLHIQEPGAVQLPAKPPHKRARR---------DGEVQAAAAKKQ 184
Query: 299 SRGSTSAKRSRAA-----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 353
G +++AA + +++ + RR++I EK++ LQ+L+P K D +ML++AI
Sbjct: 185 CGGGARKSKAKAAPAPTKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAIT 244
Query: 354 YLKSLQLQVQMMS 366
Y+K LQLQV++++
Sbjct: 245 YVKFLQLQVKVLA 257
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 290 LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
L S D + SRGS A + +L R+RR+RINE+++ LQ L+P K D ++ML+
Sbjct: 248 LNSKDKARASRGS-------ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLE 300
Query: 350 EAIEYLKSLQLQVQMMS 366
EA+EY+K LQLQ++++S
Sbjct: 301 EAVEYVKFLQLQIKLLS 317
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M+ LQEL+P C+K A +LDE I +++SLQ QV+
Sbjct: 186 ARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVE 245
Query: 364 MMSMGCGVV 372
M+SM V
Sbjct: 246 MLSMRLAAV 254
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M+ LQEL+P C+K A +LDE I +++SLQ QV+
Sbjct: 202 ARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVE 261
Query: 364 MMSMGCGVV 372
M+SM V
Sbjct: 262 MLSMRLAAV 270
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN++M+ LQEL+P CNK S A +LDE I +++ LQ QV+
Sbjct: 184 ARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQVE 243
Query: 364 MMSMGCGVV 372
++SM V
Sbjct: 244 ILSMRLAAV 252
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 285 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDK 344
SE+ E + T A R A + +L R+RR+RINE++R LQ L+P K D
Sbjct: 178 SEEGNFEGNTYSSAKKTCTRASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKVDI 237
Query: 345 ASMLDEAIEYLKSLQLQVQMMS 366
++ML+EA +Y+K LQLQ++++S
Sbjct: 238 STMLEEAAQYVKFLQLQIKLLS 259
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
S G A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA++Y+K L
Sbjct: 243 SNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFL 302
Query: 359 QLQVQMMSMGCGVVPMMFPGVQQYMP--NMGMGIGMGMGM 396
QLQ++++S + Y P GM IG+ + +
Sbjct: 303 QLQIKLLSSD---------DLWMYAPIAYNGMDIGLNLKL 333
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR +INE++R LQ+++P C K+ A MLDE I Y++SLQ QV+
Sbjct: 159 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVE 218
Query: 364 MMSM 367
+SM
Sbjct: 219 FLSM 222
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
S G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA+ Y+K L
Sbjct: 270 SNGKTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFL 329
Query: 359 QLQVQMMSMGCGVVPMMFPGVQQYMP 384
Q Q+++ ++G + + + Y P
Sbjct: 330 QTQIKVCTIGDIIYLLSSDDMWMYAP 355
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 350
S D +K +R +A + H+L+ER RR++IN +M+ LQEL+P CNK S A +LD+
Sbjct: 181 SGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDK 240
Query: 351 AIEYLKSLQLQVQMMSMGCGVV 372
I +++SLQ +V+++SM V
Sbjct: 241 IINHVQSLQNEVEILSMKLAAV 262
>gi|414872419|tpg|DAA50976.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 284 HSEDVELESADAK-KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK 341
+++DVE + A+ + K + + +R+RAAEVHNLSERRRRDRI EKM LQELIP CNK
Sbjct: 254 NNQDVECKEANEETKPWQRNGPKRRTRAAEVHNLSERRRRDRIKEKMLVLQELIPHCNK 312
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 18/144 (12%)
Query: 258 ASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLS 317
A+ EPP K R R+G+ TD +E V+ DA + +S A
Sbjct: 267 AAGEPP--KDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFH 324
Query: 318 ERRRRDRINEKMRALQELIPRCNK---------------SDKASMLDEAIEYLKSLQLQV 362
+ RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV
Sbjct: 325 LQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQV 384
Query: 363 QMMSMGCGVV-PMMFPGVQQYMPN 385
+ +SM V P + V ++P
Sbjct: 385 EFLSMKLSTVNPQLDFDVDNFIPK 408
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 18/144 (12%)
Query: 258 ASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLS 317
A+ EPP K R R+G+ TD +E V+ DA + +S A
Sbjct: 267 AAGEPP--KDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFH 324
Query: 318 ERRRRDRINEKMRALQELIPRCNK---------------SDKASMLDEAIEYLKSLQLQV 362
+ RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV
Sbjct: 325 LQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQV 384
Query: 363 QMMSMGCGVV-PMMFPGVQQYMPN 385
+ +SM V P + V ++P
Sbjct: 385 EFLSMKLSTVNPQLDFDVDNFIPK 408
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
AKR +A + H+L+ER RR++INE+++ LQ+L+P C K+ A MLD I+Y++SLQ Q++
Sbjct: 106 AKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIE 165
Query: 364 MMSM 367
+SM
Sbjct: 166 FLSM 169
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
+G + ++R A + ++ RRRR++INE+++ LQ L+P K D ++ML+EA++Y+K LQ
Sbjct: 243 KGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 302
Query: 360 LQVQMMSMG--CGVVPMMFPGVQQYMPNMGMGIGM 392
LQ++++S P+ F G+ N+G+ + +
Sbjct: 303 LQIKLLSSDDLWMYAPIAFNGM-----NIGLDLNL 332
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
AKR +A + H+L+ER RR++INE+++ LQ+L+P C K+ A MLD I+Y++SLQ Q++
Sbjct: 106 AKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIE 165
Query: 364 MMSM 367
+SM
Sbjct: 166 FLSM 169
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M+ LQEL+P C+K A +LDE I ++++LQ QV+
Sbjct: 187 ARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVE 246
Query: 364 MMSMGCGVV 372
M+SM V
Sbjct: 247 MLSMRLAAV 255
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+++ER RR +INE+++ LQ+++P C K+ A+MLDE I Y++SLQ QV+
Sbjct: 149 ARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVE 208
Query: 364 MMSM 367
+SM
Sbjct: 209 FLSM 212
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+++ER RR +INE+++ LQ+++P C K+ A+MLDE I Y++SLQ QV+
Sbjct: 149 ARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVE 208
Query: 364 MMSM 367
+SM
Sbjct: 209 FLSM 212
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR +INEK+R LQ ++P C K+ A MLDE I Y++SLQ QV+
Sbjct: 159 ARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVE 218
Query: 364 MMSM 367
+S+
Sbjct: 219 FLSL 222
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 258 ASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLS 317
A+ EPP K R R+G+ TD +E V+ DA + +S A
Sbjct: 146 AAGEPP--KDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFH 203
Query: 318 ERRRRDRINEKMRALQELIPRCNK---------------SDKASMLDEAIEYLKSLQLQV 362
+ RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV
Sbjct: 204 LQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQV 263
Query: 363 QMMSMGCGVV-PMMFPGVQQYMP 384
+ +SM V P + V ++P
Sbjct: 264 EFLSMKLSTVNPQLDFDVDNFIP 286
>gi|26449595|dbj|BAC41923.1| putative bHLH transcription factor bHLH026 [Arabidopsis thaliana]
Length = 143
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Query: 325 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMP 384
++ KMR LQ+L+P C+K+DK S+LD+ IEY+K+LQLQ+QMMS GV P P
Sbjct: 1 MSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMS-TVGVNPYFLPAT----- 54
Query: 385 NMGMGIGMGMGMGRA 399
+G GM M A
Sbjct: 55 ---LGFGMHNHMLTA 66
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
AKR +A + H+++ER RR++IN K+R LQ+++P C+KS A ML+E I Y+ SLQ QV+
Sbjct: 160 AKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQNQVE 219
Query: 364 MMSM 367
+SM
Sbjct: 220 FLSM 223
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
+R +A + H+L+ER RR++IN +M+ LQEL+P CNK S A +LD+ I +++SLQ +V+
Sbjct: 162 VRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHEVE 221
Query: 364 MMSMGCGVV-PMMFPGVQQYMPNMGMGI 390
++SM V P++ + + GM +
Sbjct: 222 ILSMKLAAVNPIIDFNLDSILAAEGMSL 249
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR +INE++R L++++P C K+ A MLDE I Y++SLQ QV+
Sbjct: 150 ARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVE 209
Query: 364 MMSM 367
+SM
Sbjct: 210 FLSM 213
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
Query: 274 RKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQ 333
+KG+ +++ D D +K + A+R +A + H+L+ER RR++IN +M L+
Sbjct: 169 KKGKTAEEKLAGGD-----GDDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLK 223
Query: 334 ELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMM-FPGVQQYM 383
EL+P C+K S A +LDE I +++SLQ QV+ +SM V P + F G+ ++
Sbjct: 224 ELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFL 276
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 296 KKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEY 354
+K+ A+ +A H+++E+ RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y
Sbjct: 141 QKEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINY 200
Query: 355 LKSLQLQVQMMSMGCGVV 372
++SLQ QV+ +SM V
Sbjct: 201 VQSLQRQVEFLSMKLSTV 218
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+++ER RR +INE+++ LQ+++P C K+ A+MLDE I Y++SLQ QV+
Sbjct: 138 ARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVE 197
Query: 364 MMSM 367
+SM
Sbjct: 198 FLSM 201
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 68.2 bits (165), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA ML+E I Y++SLQ Q++
Sbjct: 8 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQIE 67
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 68 FLSMKLAAV 76
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
S G T A R A + +L R+RR+RINE+++ LQ L+P K D ++ML+EA+ Y+ L
Sbjct: 268 SNGKTRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVNFL 327
Query: 359 QLQVQMMS 366
QLQ++++S
Sbjct: 328 QLQIKLLS 335
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
+ G AKR A + ++ R RR+RINE+++ LQ L+P K D +ML+EAI Y+K L
Sbjct: 207 TNGKPRAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFL 266
Query: 359 QLQVQMMS 366
QLQV M+S
Sbjct: 267 QLQVNMLS 274
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR +INE++R LQ+++P C K+ A MLDE I Y++SLQ QV+
Sbjct: 75 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVE 134
Query: 364 MMSM 367
+SM
Sbjct: 135 FLSM 138
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
AKR +A + H+L+ER RR++INE+++ LQ+L+P C K+ A MLD I+Y++SLQ Q++
Sbjct: 49 AKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIE 108
Query: 364 MMSM 367
+SM
Sbjct: 109 FLSM 112
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 44/56 (78%)
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+ E +++ R RR +I+E++R L++LIP NK D A+MLDEAIEY+K LQLQVQ++
Sbjct: 387 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 442
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+++ER RR +INE+++ LQ+++P C K+ A+MLDE I Y++SLQ QV+
Sbjct: 151 ARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVE 210
Query: 364 MMSM 367
+SM
Sbjct: 211 FLSM 214
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM-LDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M+ LQEL+P C+K + LDE I ++++LQ QV+
Sbjct: 187 ARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTLQRQVE 246
Query: 364 MMSMGCGVV 372
M+SM V
Sbjct: 247 MLSMRLAAV 255
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
AKR +A + H+++ER RR++IN K+R LQ+L+P C++S A ML+E I Y+ SLQ QV+
Sbjct: 150 AKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVE 209
Query: 364 MMSM 367
+SM
Sbjct: 210 FLSM 213
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
S G A R A + +L R+RR++INE++R LQ L+P K D ++ML++AI Y+K L
Sbjct: 194 SNGKARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFL 253
Query: 359 QLQVQMMS 366
QLQ++++S
Sbjct: 254 QLQIKLLS 261
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
S G A R A + +L R+RR++INE++R LQ L+P K D ++ML++AI Y+K L
Sbjct: 180 SNGKARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFL 239
Query: 359 QLQVQMMS 366
QLQ++++S
Sbjct: 240 QLQIKLLS 247
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%)
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 362
T A R A + +L R+RR+RINE++R LQ+L+P K D ++ML+EA+ Y+K LQLQ+
Sbjct: 237 TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQI 296
Query: 363 QMMS 366
+++S
Sbjct: 297 KLLS 300
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%)
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 362
T A R A + +L R+RR+RINE++R LQ+L+P K D ++ML+EA+ Y+K LQLQ+
Sbjct: 237 TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQI 296
Query: 363 QMMS 366
+++S
Sbjct: 297 KLLS 300
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 290 LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
L A+ + SRGS A + +L R+RR+RINE++R LQ L+P K D ++ML+
Sbjct: 178 LNGANKSRASRGS-------ATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLE 230
Query: 350 EAIEYLKSLQLQVQMMS 366
EA++Y+K LQLQ++++S
Sbjct: 231 EAVQYVKFLQLQIKLLS 247
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 349
E + KKQ A+R A + H+L+ER RR+RI+E+M+ L+ L+P CNK + KA MLD
Sbjct: 138 EKNEDKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLD 197
Query: 350 EAIEYLKSLQ 359
E I Y++SLQ
Sbjct: 198 EIINYVQSLQ 207
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
KQS S RS + + +L +RRR+RINEK+R LQ+LIP K D ++ML+EA++Y+K
Sbjct: 162 KQSTSSRGPSRS-SKDSQSLYAKRRRERINEKLRTLQQLIPNGTKVDMSTMLEEAVQYVK 220
Query: 357 SLQLQVQMMSMGC 369
LQLQ++++ + C
Sbjct: 221 FLQLQIKLL-LAC 232
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 26/161 (16%)
Query: 212 NNNNRCRNTSGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAED 271
N++ R G G + +GGGGG A +V S S +P +P +D
Sbjct: 66 NDSGNKRIRLGGGGSTVENGGGGGLKAAE-----ASSVAGSNNSDEQSTKPSESEPPKQD 120
Query: 272 ----RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINE 327
R R+G+ TD +E V S + L RR++I+E
Sbjct: 121 YIHVRARRGQATDSHSIAERV----------------IHFSLCLSISYLLLVARREKISE 164
Query: 328 KMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 367
+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+ +SM
Sbjct: 165 RMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSM 205
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 8/95 (8%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
KQS S K+ + + +L +RRR+RINE++R LQ+L+P K D ++ML+EA++Y+K
Sbjct: 150 KQSDNSRGHKQC-SKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVK 208
Query: 357 SLQLQVQMMSMG--CGVVPMMFPGVQQYMPNMGMG 389
LQLQ++++S P+ + G+ NM +G
Sbjct: 209 FLQLQIKLLSSDDTWMFAPLAYNGM-----NMDLG 238
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
KQS S K+ + + +L +RRR+RINE++R LQ+L+P K D ++ML+EA++Y+K
Sbjct: 162 KQSDNSRGHKQC-SKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVK 220
Query: 357 SLQLQVQMMS 366
LQLQ++++S
Sbjct: 221 FLQLQIKLLS 230
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYL 355
KQ A+R +A + H+L+ER RR++I+ +M+ LQ L+P C++ + KA ML+E I Y+
Sbjct: 144 KQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYV 203
Query: 356 KSLQLQVQMMSMGCGVV 372
KSLQ Q++ +SM V
Sbjct: 204 KSLQRQIEFLSMKLAAV 220
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
E + QS ++ KR + + +L ++RR+RINEK+R LQ+LIP K D ++ML+E
Sbjct: 152 EKSIVANQSDNTSGCKRP-SKNMQSLYAKKRRERINEKLRVLQQLIPNGTKVDISTMLEE 210
Query: 351 AIEYLKSLQLQVQMMS 366
A++Y+K LQLQ++++S
Sbjct: 211 AVQYVKFLQLQIKVLS 226
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 292 SADAKKQS----RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
S+D +K S +G T A + A + +L R+RR++INE+++ LQ L+P K D ++M
Sbjct: 152 SSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTM 211
Query: 348 LDEAIEYLKSLQLQVQMMS 366
L+EA+ Y+K LQLQ++++S
Sbjct: 212 LEEAVHYVKFLQLQIKLLS 230
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 292 SADAKKQS----RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
S+D +K S +G T A + A + +L R+RR++INE+++ LQ L+P K D ++M
Sbjct: 152 SSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTM 211
Query: 348 LDEAIEYLKSLQLQVQMMS 366
L+EA+ Y+K LQLQ++++S
Sbjct: 212 LEEAVHYVKFLQLQIKLLS 230
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAI 352
D +K + A+R +A + H+L+ER RR++IN +M L+EL+P C+K S A +LDE I
Sbjct: 171 DDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEII 230
Query: 353 EYLKSLQLQVQMMSMGCGVV-PMM-FPGVQQYM 383
+++SLQ QV+ +SM V P + F G+ ++
Sbjct: 231 NHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFL 263
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
G AKR A + ++ R+RR+RINE++RALQ L+P K D +ML+EAI Y+K LQL
Sbjct: 235 GKPRAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQL 294
Query: 361 QVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGMGMGM 396
Q+ P + G M + +GM + M
Sbjct: 295 QLLSSDEYWMYAPTNYNG-------MNISLGMHLNM 323
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 48/69 (69%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
S G T A R A + +L R+RR+RINE+++ LQ ++P K D ++ML+EA+ Y+K L
Sbjct: 266 SSGKTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKVDISTMLEEAVHYVKFL 325
Query: 359 QLQVQMMSM 367
QLQ+++ ++
Sbjct: 326 QLQIKVKAL 334
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
+R +A + H+L+ER RR++IN +M+ LQEL+P C K S A +LDE I ++++LQ QV+
Sbjct: 175 VRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQVE 234
Query: 364 MMSMGCGVV 372
++SM V
Sbjct: 235 ILSMKLAAV 243
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Query: 292 SADAKKQSRGSTSA----KRSRA-AEVHNLSERRRRDRINEKMRALQELIPRC-NKSDKA 345
S+D K Q + TS+ KRS AE H+L+E+RRR +I EK++ LQ+L+P C N S++A
Sbjct: 140 SSDHKLQEKRKTSSTGRGKRSHHHAEAHSLTEKRRRLKIKEKLKTLQQLVPGCPNNSNQA 199
Query: 346 SMLDEAIEYLKSLQLQV 362
S LD+ I Y+KSLQ +
Sbjct: 200 STLDQTIRYIKSLQQHI 216
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 45/55 (81%)
Query: 312 EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
++ +L +RRR+RINE++R LQ+LIP K D ++ML+EA++Y+K LQLQ++++S
Sbjct: 160 DLQSLYAKRRRERINERLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLLS 214
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 17/105 (16%)
Query: 279 TDDEYHSEDVELESADAK-----------KQSRG------STSAKRSRAAEVHNLSERRR 321
+DDE + D L D + + SRG S A+ + +VH + ++R
Sbjct: 209 SDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARLKQLNKVHCMMVQKR 268
Query: 322 RDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
R+RINE++R LQ L+P K D ++ML+EA++Y+K LQLQ++++S
Sbjct: 269 RERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 313
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 363
AKR +A + H+L+ER RR+RINEK+R LQ+L+P C K+ A MLD I Y++SLQ Q++
Sbjct: 123 AKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIE 182
Query: 364 M 364
+
Sbjct: 183 V 183
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 294 DAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 353
+A K R S +A S A + ++ R+RR+RINE++R LQ L+P K D ++ML+EA++
Sbjct: 188 EAPKLGRKSRAAS-SPATDAQSIYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQ 246
Query: 354 YLKSLQLQVQMMS 366
Y+K LQLQ++++S
Sbjct: 247 YVKFLQLQIKLLS 259
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 44/56 (78%)
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+ E +++ R RR +I+E++R L++LIP NK D A+MLDEAIEY+K LQLQVQ++
Sbjct: 15 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 70
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M L+EL+P C+K S A +LDE I +++SLQ QV+
Sbjct: 109 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 168
Query: 364 MMSMGCGVVP--MMFPGVQQYM 383
+SM V + F G+ ++
Sbjct: 169 YLSMRLAAVNPRVDFGGLDNFL 190
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M L+EL+P C+K S A +LDE I +++SLQ QV+
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 364 MMSMGCGVVP--MMFPGVQQYM 383
+SM V + F G+ ++
Sbjct: 61 YLSMRLAAVNPRVDFGGLDNFL 82
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 285 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDK 344
S+ +E+ + + G A+R A + ++ R RR++INE+++ LQ L+P K D
Sbjct: 424 SQAMEIYAIGPALNTNGKPRARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKVDI 483
Query: 345 ASMLDEAIEYLKSLQLQVQMM 365
+MLDEAI Y++ LQLQV ++
Sbjct: 484 VTMLDEAIHYVQFLQLQVTLL 504
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M+ LQEL+P C+K S A +LDE I +++SLQ +V+
Sbjct: 9 ARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQREVE 68
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 69 FLSMRLAAV 77
>gi|194695980|gb|ACF82074.1| unknown [Zea mays]
gi|413939375|gb|AFW73926.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 216
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 37/43 (86%)
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV 371
M+ALQ LIP +K+DKASMLD+AIEYLK LQLQVQM+SM G+
Sbjct: 1 MKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSMRNGL 43
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M L+EL+P C+K S A +LDE I +++SLQ QV+
Sbjct: 148 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 207
Query: 364 MMSMGCGVVP--MMFPGVQQYM 383
+SM V + F G+ ++
Sbjct: 208 YLSMRLAAVNPRVDFGGLDNFL 229
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M L+EL+P C+K S A +LDE I +++SLQ QV+
Sbjct: 159 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 218
Query: 364 MMSMGCGVV 372
+SM V
Sbjct: 219 YLSMRLATV 227
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 48/67 (71%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
+G T A + A + +L R+RR+RI++++R LQ L+P K D ++ML+EA++Y+K LQ
Sbjct: 237 KGKTKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYVKFLQ 296
Query: 360 LQVQMMS 366
LQ +++S
Sbjct: 297 LQNKLLS 303
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M L+EL+P C+K S A +LDE I +++SLQ QV+
Sbjct: 82 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 141
Query: 364 MMSMGCGVVP--MMFPGVQQYM 383
+SM V + F G+ ++
Sbjct: 142 YLSMRLAAVNPRVDFGGLDSFL 163
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A++ +A + H+L ER RR++I+E+M+ LQ L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 134 ARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYVQSLQRQVE 193
Query: 364 M 364
+
Sbjct: 194 V 194
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS--DKASMLDEAIEYLKSLQLQV 362
AKR A +++ER RR RI+E+MR LQEL+P +K + A MLDEA+EY+KSLQ QV
Sbjct: 470 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQKQV 529
Query: 363 QMMS 366
Q ++
Sbjct: 530 QELA 533
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYL 355
KQ A+R +A H+L+ER RR++I+ +M+ LQ L+P C++ + KA ML+E I Y+
Sbjct: 13 KQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYV 72
Query: 356 KSLQLQVQMMSMGCGVV 372
KSLQ Q++ +SM V
Sbjct: 73 KSLQRQIEFLSMKLAAV 89
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 66/97 (68%), Gaps = 7/97 (7%)
Query: 283 YHSEDVELESADAKKQS---RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
YH + ++ + A Q R A+R +A + H+++ER RR+RI E++RALQEL+P
Sbjct: 123 YHGQPMQQPAPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTV 182
Query: 340 NKSDKASMLDEAIEYLKSLQLQVQMMSM----GCGVV 372
NK+D+A+M+DE ++Y+K L+LQV+++SM G G V
Sbjct: 183 NKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAV 219
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
Query: 320 RRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGV 379
RRR+RINE++R LQ L+P K D ++ML+EA++Y+K LQLQ++++SM P+ + G+
Sbjct: 86 RRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSMWM-YAPIAYNGM 144
Query: 380 QQYMPNMGMGIGM 392
N+G+ +
Sbjct: 145 -----NIGLDLSF 152
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
Query: 292 SADAKKQS----RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 347
S+D +K S +G T A + A + +L R+RR++INE+++ LQ L+P K D ++M
Sbjct: 152 SSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTM 211
Query: 348 LDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYM 383
L+EA+ Y+K LQLQ+++ C ++ F Q +
Sbjct: 212 LEEAVHYVKFLQLQIKV----CRLLKGFFVFSQNLI 243
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDE 350
+ + K + + A+ +A + NL+ER RR +INEK+R LQ ++P C K+ A MLDE
Sbjct: 142 TEEEKAKEVVNVRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDE 201
Query: 351 AIEYLKSLQLQVQMMSM 367
I Y++SLQ QV+ +S+
Sbjct: 202 IINYVQSLQNQVEFLSL 218
>gi|79375674|ref|NP_176991.2| transcription factor bHLH109 [Arabidopsis thaliana]
gi|75287899|sp|Q5XVH0.1|BH109_ARATH RecName: Full=Transcription factor bHLH109; AltName: Full=Basic
helix-loop-helix protein 109; Short=AtbHLH109;
Short=bHLH 109; AltName: Full=bHLH transcription factor
bHLH109
gi|52354203|gb|AAU44422.1| hypothetical protein AT1G68240 [Arabidopsis thaliana]
gi|60547661|gb|AAX23794.1| hypothetical protein At1g68240 [Arabidopsis thaliana]
gi|332196649|gb|AEE34770.1| transcription factor bHLH109 [Arabidopsis thaliana]
Length = 185
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIP-RCNKSDKASMLD 349
E D + AKR R+ E + E++RR I +K+ LQ L+P C K D AS L+
Sbjct: 49 EKHDEEPDEESYRMAKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLE 108
Query: 350 EAIEYLKSLQLQVQMMSMGCGVVPMMFP 377
IEY+KSL+ QV +MSM P+ P
Sbjct: 109 NIIEYIKSLKYQVDVMSMAYTTTPVYTP 136
>gi|255572178|ref|XP_002527029.1| hypothetical protein RCOM_1311480 [Ricinus communis]
gi|223533664|gb|EEF35401.1| hypothetical protein RCOM_1311480 [Ricinus communis]
Length = 243
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Query: 278 ETDDEYHSEDVELESADAKKQSRGSTSAKRSR-AAEVHNLSERRRRDRINEKMRALQELI 336
ET D+ H +D+ S + + R R R +A++ N+ ERRRRDRI +KM++L+ELI
Sbjct: 54 ETHDD-HYDDIGGISGEPR---RNKNHRNRKRISADMRNIYERRRRDRIRDKMKSLRELI 109
Query: 337 PRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
P C+K D+ASMLD+AI YLK+L+L V+M++
Sbjct: 110 PHCHKQDRASMLDDAINYLKALKLHVEMLA 139
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK---SDKASMLDEAIEYLKSLQLQ 361
A+R +A + H+L+ER RR++IN +M+ LQEL+P C+K S A +LD+ I +++SLQ Q
Sbjct: 34 ARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQSLQRQ 93
Query: 362 VQMMSMGCGVV 372
V+ +SM V
Sbjct: 94 VEFLSMRLAAV 104
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 42/53 (79%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
+L+ + RR+RI+E++RALQEL+P K D +ML++AI Y+K LQLQV++++
Sbjct: 205 QSLAAKNRRERISERLRALQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 257
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Query: 312 EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV 371
E ++ R+RR+RINE+++ LQ L+P K D ++ML+EA+ Y+K LQLQ++++S
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLLS--SDD 279
Query: 372 VPMMFPGVQQYMPNMGMGIGMGMGM 396
M P + GMGIG+ + M
Sbjct: 280 TWMYAP-----IAYNGMGIGIDLRM 299
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 44/60 (73%)
Query: 307 RSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
R + +L R+RR+RINE+++ LQ L+P K D ++ML+EA++Y+K LQLQ++++S
Sbjct: 222 RQSTTDPQSLYARKRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 281
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 140 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKI 199
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 200 LSMSRLGGAGAV 211
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 321 RRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGV 379
RR+RI+E+M+ LQ L+P CNK + KA MLDE I Y++SLQ QV+ +SM +
Sbjct: 205 RRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFD 264
Query: 380 QQYMPNMGM 388
YMP+ M
Sbjct: 265 SHYMPSKDM 273
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++IN +M+ L+EL+P C+K A +LDE I +++SLQ QV+
Sbjct: 35 ARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSLQRQVE 94
Query: 364 MMSMGCGVV 372
M+SM V
Sbjct: 95 MLSMRLAAV 103
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 139 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 198
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 199 LSMSRLGGAGAV 210
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 122 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 181
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 182 LSMSRLGGAGAV 193
>gi|224088258|ref|XP_002308393.1| predicted protein [Populus trichocarpa]
gi|222854369|gb|EEE91916.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 35/39 (89%)
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 1 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 39
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 125 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 184
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 185 LSMSRLGGAGAV 196
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 137 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 196
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 197 LSMSRLGGAGAV 208
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
++R +A H+L+ER RR++I+E+M+ LQ+L+P CNK + KA +L+ I Y++SLQ QV+
Sbjct: 114 SRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQSLQSQVE 173
Query: 364 MMSM 367
++S+
Sbjct: 174 ILSV 177
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C K + KA MLDE I Y++ LQ QV+
Sbjct: 8 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQVE 67
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 156 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 215
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 216 LSMSRLGGAGAV 227
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 14/116 (12%)
Query: 283 YHSEDVE----LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPR 338
Y+S D E L S +K R + A R A++ +L R+RR+RIN++++ LQ L+P
Sbjct: 109 YNSSDDEKALGLVSNTSKSLKRKA-KANRGIASDPQSLYARKRRERINDRLKTLQSLVPN 167
Query: 339 CNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGMGM 394
K D ++ML++A+ Y+K LQLQ++++S + Y P G+ MG+
Sbjct: 168 GTKVDISTMLEDAVHYVKFLQLQIKLLSS---------EDLWMYAPLAHNGLNMGL 214
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I+E+M+ LQ L+P C+K K +LDE I Y+KSLQ QV+
Sbjct: 110 ARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQNQVE 169
Query: 364 MMSMGCGVVPMMFPG 378
+ + M G
Sbjct: 170 FLVGKLASISPMLIG 184
>gi|79320892|ref|NP_001031251.1| transcription factor bHLH109 [Arabidopsis thaliana]
gi|52354201|gb|AAU44421.1| hypothetical protein AT1G68240 [Arabidopsis thaliana]
gi|332196650|gb|AEE34771.1| transcription factor bHLH109 [Arabidopsis thaliana]
Length = 174
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIP-RCNKSDKASMLD 349
E D + AKR R+ E + E++RR I +K+ LQ L+P C K D AS L+
Sbjct: 49 EKHDEEPDEESYRMAKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLE 108
Query: 350 EAIEYLKSLQLQVQMMSMGCGVVPMMFP 377
IEY+KSL+ QV +MSM P+ P
Sbjct: 109 NIIEYIKSLKYQVDVMSMAYTTTPVYTP 136
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 132 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 191
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 192 LSMSRLGGAGAV 203
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I+E+M+ LQ L+P C+K K +LDE I Y+KSLQ QV+
Sbjct: 110 ARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVE 169
Query: 364 MMSMGCGVVPMMFPG 378
+ + M G
Sbjct: 170 FLVGKLASISPMLIG 184
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I+E+M+ LQ L+P C+K K +LDE I Y+KSLQ QV+
Sbjct: 110 ARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVE 169
Query: 364 MMSMGCGVVPMMFPG 378
+ + M G
Sbjct: 170 FLVGKLASISPMLIG 184
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 132 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 191
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 192 LSMSRLGGAGAV 203
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 129 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 188
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 189 LSMSRLGGAGAV 200
>gi|255572174|ref|XP_002527027.1| hypothetical protein RCOM_1311460 [Ricinus communis]
gi|223533662|gb|EEF35399.1| hypothetical protein RCOM_1311460 [Ricinus communis]
Length = 260
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 5/88 (5%)
Query: 286 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 345
+D+ A K ++ + +R+R+A ERRRR+RI EK++AL ELIP C+K D A
Sbjct: 78 QDISRGIPGALKTNKLGQNHRRTRSATY----ERRRRNRIREKLKALGELIPHCHKQDTA 133
Query: 346 SMLDEAIEYLKSLQLQVQMMS-MGCGVV 372
S+L+ AI+YLK+L+LQV+MMS MG G +
Sbjct: 134 SLLEAAIDYLKALKLQVEMMSNMGGGAL 161
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
+S G + A + +L R+RR+RINE+++ LQ L+P K D ++ML+EA+ Y+K
Sbjct: 216 KSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKF 275
Query: 358 LQLQVQMMS 366
LQLQ++++S
Sbjct: 276 LQLQIKLLS 284
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 300 RGSTSAKRSRAAEV-HNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKS 357
RG + S A V HNL++ RR++IN +M+ LQEL+P C+K A +LDE I ++++
Sbjct: 133 RGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQT 192
Query: 358 LQLQVQMMSMGCGVV 372
LQ QV+M+SM V
Sbjct: 193 LQRQVEMLSMRLAAV 207
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P C K + KA MLDE I Y++SLQ QV+
Sbjct: 3 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQVE 62
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%)
Query: 298 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 357
+S G + A + +L R+RR+RINE+++ LQ L+P K D ++ML+EA+ Y+K
Sbjct: 216 KSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKF 275
Query: 358 LQLQVQMMS 366
LQLQ++++S
Sbjct: 276 LQLQIKLLS 284
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 41/53 (77%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
+L+ + RR+RI+E++R LQEL+P K D +ML++AI Y+K LQLQV++++
Sbjct: 218 QSLAAKNRRERISERLRTLQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 270
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG--CGVVP 373
L R+RR+RINE+++ LQ LIP K D ++ML+EA+ Y+K LQLQ++++S P
Sbjct: 245 LYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMWMFAP 304
Query: 374 MMFPGVQQYMPNMGMGIGM 392
+ + GV N+G+ + +
Sbjct: 305 IAYNGV-----NVGLDLKI 318
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG--CGVVP 373
L R+RR+RINE+++ LQ LIP K D ++ML+EA+ Y+K LQLQ++++S P
Sbjct: 245 LYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMWMFAP 304
Query: 374 MMFPGVQQYMPNMGMGIGM 392
+ + GV N+G+ + +
Sbjct: 305 IAYNGV-----NVGLDLKI 318
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG--CGVVP 373
L R+RR+RINE+++ LQ LIP K D ++ML+EA+ Y+K LQLQ++++S P
Sbjct: 245 LYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMWMFAP 304
Query: 374 MMFPGVQQYMPNMGMGIGM 392
+ + GV N+G+ + +
Sbjct: 305 IAYNGV-----NVGLDLKI 318
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A R A +++ER RR +I+E+M+ LQEL+P ++ ++ A MLD+A+EY+K LQLQVQ
Sbjct: 381 ANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQVQ 440
Query: 364 MMS 366
++
Sbjct: 441 ELT 443
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 297 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 356
K + S SA+ S++ N RR RINE++R LQELIP K D ++ML+EAI+Y+K
Sbjct: 107 KACKHSVSAESSQSYYAKN-----RRQRINERLRILQELIPNGTKVDISTMLEEAIQYVK 161
Query: 357 SLQLQVQMMS 366
L LQ++++S
Sbjct: 162 FLHLQIKLLS 171
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
A+R A + H+L+ER RR++I+E+M+ LQ L+P C+K K +LDE I Y+KSLQ QV+
Sbjct: 44 ARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVE 103
Query: 364 MMSMGCGVVPMMFPG 378
+ + M G
Sbjct: 104 FLVGKLASISPMLIG 118
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 66/97 (68%), Gaps = 7/97 (7%)
Query: 283 YHSEDVELESADAKKQS---RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 339
+H + ++ + A Q R A+R +A + H+++ER RR+RI E++RALQEL+P
Sbjct: 123 FHGQPMQQPAPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTV 182
Query: 340 NKSDKASMLDEAIEYLKSLQLQVQMMSM----GCGVV 372
NK+D+A+M+DE ++Y+K L+LQV+++SM G G V
Sbjct: 183 NKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAV 219
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 56/72 (77%), Gaps = 4/72 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A MLDE ++Y+K L+LQV++
Sbjct: 125 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKV 184
Query: 365 MSM----GCGVV 372
+SM G G V
Sbjct: 185 LSMSRLGGAGAV 196
>gi|255559476|ref|XP_002520758.1| conserved hypothetical protein [Ricinus communis]
gi|223540143|gb|EEF41720.1| conserved hypothetical protein [Ricinus communis]
Length = 668
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 275 KGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQE 334
K RE ++ S D ADA + R +T+A+ +A H L+ERRRR+++NE+ L+
Sbjct: 448 KYREENNSPKSRD-----ADAASRFRKATAAQEELSAN-HVLAERRRREKLNERFIILRS 501
Query: 335 LIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
L+P K DKAS+L + IEY+K L+ ++Q
Sbjct: 502 LVPFVTKMDKASILGDTIEYVKQLRKKIQ 530
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E++R+LQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 136 RPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLR 195
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 196 LQVKVLSMSRLGGAGAV 212
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E++R+LQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 141 RPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLR 200
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 201 LQVKVLSMSRLGGAGAV 217
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 203 LQVKVLSMSRLGGVGAV 219
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 203 LQVKVLSMSRLGGAGAV 219
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQ 361
T AKR A +++ER RR +I+E+M+ LQ+L+P +K ++ + MLDE +EY+KSLQ Q
Sbjct: 383 TRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQRQ 442
Query: 362 VQMMS 366
VQ +S
Sbjct: 443 VQELS 447
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 203 LQVKVLSMSRLGGAGAV 219
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 145 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 204
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 205 LQVKVLSMSRLGGAGAV 221
>gi|162463519|ref|NP_001105706.1| colored plant1 [Zea mays]
gi|22195|emb|CAA40544.1| regulatory protein [Zea mays]
Length = 562
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
G+T + A+ H +SER+RR+++NE L+ L+P +K DKAS+L E I YLK LQ
Sbjct: 373 GTTVTAQENGAKNHVMSERKRREKLNEMFLVLKSLVPSIHKVDKASILAETIAYLKELQR 432
Query: 361 QVQMM 365
+VQ +
Sbjct: 433 RVQEL 437
>gi|77556979|gb|ABA99775.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 387
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 320 RRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGV 379
RRR +I E+ R LQ L+P C+KS++AS LD+ I+Y+KSLQ Q++ MS+ +++P
Sbjct: 225 RRRFKITERFRTLQRLVPGCDKSNQASTLDQTIQYMKSLQHQLKAMSVVGSPPALLYPAA 284
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 43/55 (78%)
Query: 311 AEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
E +++ R+RR +I+E++R L++L+P NK D ASMLDEAI ++K LQ+QVQ++
Sbjct: 386 VEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLL 440
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 43/55 (78%)
Query: 311 AEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
E +++ R+RR +I+E++R L++L+P NK D ASMLDEAI ++K LQ+QVQ++
Sbjct: 386 VEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLL 440
>gi|255570649|ref|XP_002526279.1| conserved hypothetical protein [Ricinus communis]
gi|223534360|gb|EEF36068.1| conserved hypothetical protein [Ricinus communis]
Length = 271
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 318 ERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
E++RR+RI +K++AL ELIP C+K D AS+L AI+Y++SLQLQ+ +
Sbjct: 121 EKKRRNRIRDKLKALGELIPNCHKQDTASILVHAIDYIRSLQLQIYV 167
>gi|320168742|gb|EFW45641.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 832
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 272 RKRKGRETDDEYHSEDVELESADAKKQSRGSTS-AKRSRAAEVHNLSERRRRDRINEKMR 330
R R E E HSE +E +A +R ST+ +KR+ E HN E+RRRDRIN +
Sbjct: 145 RHRIAAEAAAEQHSESLE-NAAHLHHDNRSSTTGSKRAYRYESHNAIEKRRRDRINASLD 203
Query: 331 ALQELIPRCNKS---DKASMLDEAIEYLKSLQLQV 362
AL L+P N+ DKA +L+ + Y++ L+ +V
Sbjct: 204 ALSRLMPPHNRGKRLDKAVVLEYTVNYVRQLEERV 238
>gi|19698849|gb|AAL91160.1| putative protein [Arabidopsis thaliana]
gi|23197682|gb|AAN15368.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 6/77 (7%)
Query: 271 DRKRKG-RETDDEYHSE-DVELESAD----AKKQSRGSTSAKRSRAAEVHNLSERRRRDR 324
DRKRK + D E S+ D+ L S D K S+ S S +RSRAAEVHNLSERRRRDR
Sbjct: 212 DRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDR 271
Query: 325 INEKMRALQELIPRCNK 341
INE+M+ALQELIP C++
Sbjct: 272 INERMKALQELIPHCSR 288
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 41/53 (77%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
+L+ + RR+RI+E++R LQEL+P K D +ML++AI Y+K LQLQV++++
Sbjct: 208 QSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 260
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 80 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 139
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 140 LQVKVLSMSRLGGAGAV 156
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 6/77 (7%)
Query: 296 KKQSRGSTSAKRSRAA------EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
KKQ A ++++A + +L+ + RR+RI+E++R LQEL+P K D +ML+
Sbjct: 184 KKQCGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLE 243
Query: 350 EAIEYLKSLQLQVQMMS 366
+AI Y+K LQLQV++++
Sbjct: 244 KAISYVKFLQLQVKVLA 260
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 6/77 (7%)
Query: 296 KKQSRGSTSAKRSRAA------EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
KKQ A ++++A + +L+ + RR+RI+E++R LQEL+P K D +ML+
Sbjct: 168 KKQCGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLE 227
Query: 350 EAIEYLKSLQLQVQMMS 366
+AI Y+K LQLQV++++
Sbjct: 228 KAISYVKFLQLQVKVLA 244
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E+MR LQ+L+P +K ++ A MLD A+EY+K LQ QVQ
Sbjct: 342 AKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQVQ 401
Query: 364 MMS 366
+S
Sbjct: 402 TLS 404
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMGCGVVPM 374
++ R RR+RINEK+R LQ+L+P +K D ASMLDEA YLK L+ QV+ + S+G V M
Sbjct: 347 VAARHRRERINEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKVDAM 406
Query: 375 MFP 377
P
Sbjct: 407 NCP 409
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 6/77 (7%)
Query: 296 KKQSRGSTSAKRSRAA------EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
KKQ A ++++A + +L+ + RR+RI+E++R LQEL+P K D +ML+
Sbjct: 186 KKQCGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLE 245
Query: 350 EAIEYLKSLQLQVQMMS 366
+AI Y+K LQLQV++++
Sbjct: 246 KAISYVKFLQLQVKVLA 262
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E+MR LQEL+P +K ++ + MLD A+EY+K LQ QVQ
Sbjct: 361 AKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQVQ 420
Query: 364 MMS 366
+S
Sbjct: 421 TLS 423
>gi|168042679|ref|XP_001773815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674930|gb|EDQ61432.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 418
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H L+ERRRR+++N++ AL+ELIP +K DKAS+L AIEY+K LQ Q++ +
Sbjct: 213 HVLAERRRREKLNDRFVALRELIPNVSKMDKASILGVAIEYVKELQSQLRAL 264
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E+MR LQEL+P +K ++ + MLD A+EY+K LQ QVQ
Sbjct: 361 AKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQVQ 420
Query: 364 MMS 366
+S
Sbjct: 421 TLS 423
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 41/53 (77%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
+L R+RR++INE+++ LQ L+P K D ++ML+EA+ Y+K +QLQ++++S
Sbjct: 257 QSLYARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLLS 309
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD-KASMLDEAIEYLKSLQLQVQ 363
A+R +A + H+++ER RR++I ++R LQ+L+P C K+ A MLDE I Y+ SLQ QV+
Sbjct: 204 ARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINYVHSLQNQVE 263
Query: 364 MMS 366
+S
Sbjct: 264 FLS 266
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 61.6 bits (148), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 318 ERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMG-CGVVP 373
ER RR+RI E+M+ LQ L+P CNK + KA ML+E I Y++SLQ QV+ +SM GV P
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGVNP 60
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 315 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
++ R RR+RI+ K+R LQ L+P K D ASMLDEAI Y+K L+ QVQ M M
Sbjct: 295 TVAARHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAMEM 347
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 319 RRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
+ RR RINE++R LQELIP K D ++ML+EAI+Y+K L LQ++++S
Sbjct: 124 KNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLS 171
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
++ R RR+RI+ K+R LQ L+P K D ASMLDEAI Y+K L+ QVQ M M
Sbjct: 297 VAARHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAMEM 348
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL+P +K ++ A MLD A+EY+K LQ Q +
Sbjct: 296 AKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQFK 355
Query: 364 MMS---MGCGVVPM 374
+S C + M
Sbjct: 356 TLSEKRANCKCISM 369
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCG 370
++ R RR+R+++++R LQ+L+P +K D ASMLDEA YLK L+ QVQ + G G
Sbjct: 291 VAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQALETGNG 345
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 143/346 (41%), Gaps = 72/346 (20%)
Query: 42 FPADQSAPREIPSSHHHQQEQQDH-LFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPC 100
FP+ + P ++ SSHH Q D+ FMQ+D A F S +++ P P
Sbjct: 175 FPSWDNRPSKL-SSHH----QADYGCFMQQDGAA-----------FGSS--SNVFRPPPQ 216
Query: 101 ITSTTTTTATATATPPVRATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFAR 160
+ + ++ A + R + + N+ ++ S PP G F
Sbjct: 217 FVDSHNLSLSSQA---MLFERQHQHQQEFNSFSSHVSYPP--------------GGTFNC 259
Query: 161 HMPREVASGPSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNT 220
H +G S S + S+ +D P S+ + G+ N N
Sbjct: 260 HDGVAATTGNSRSNLELLLGSSAIDFKQ-PQQEEQQITSQCQGAFGGSWSANGN---LGI 315
Query: 221 SGAGAAATSSG-GGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRET 279
+G A +G GG G S A+ L + PG S+ +KP + + R
Sbjct: 316 NGQAARRNHTGDGGAGQSQAQQLQSIFL-----PGQGSS------RKPGIKTVEEMSRRC 364
Query: 280 DDEYHSEDVELESADAKKQSRGSTSAKRSR--------------------AAEVHNLSER 319
+ ++ D + +++R S+KR A + +++ R
Sbjct: 365 SLQDNNRDAKRHKGSTAQRTRFGASSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAAR 424
Query: 320 RRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+RR+RI+++++ LQELIP +K D +ML++AI Y+K LQLQV+++
Sbjct: 425 QRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQLQVKVL 470
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS------- 366
+++ R RR+RI+EK+R LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 156 QSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 215
Query: 367 MGCGVVPMM-----FPGVQQYMPNMGM 388
G G M P +QY P+ +
Sbjct: 216 AGIGFPVTMSNGSYLPITKQYQPSQNL 242
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
+G + A++ + ++RR+RINE+++ LQ L+P K D ++ML+EA++Y+K LQ
Sbjct: 235 KGKSRCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQ 294
Query: 360 LQVQMMSMG--CGVVPMMFPGVQQYMPNMGMGIGM 392
+Q++++S P+ + G+ N+G+ + +
Sbjct: 295 VQIKLLSSDDHWMYAPIAYNGM-----NIGLNLNI 324
>gi|222617412|gb|EEE53544.1| hypothetical protein OsJ_36753 [Oryza sativa Japonica Group]
Length = 188
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 312 EVHNLSER-RRRDRINEKMRALQELIPRCNKSD-KASMLDEAIEYLKSLQLQVQMMSMGC 369
E N S++ +RR +INE ++ LQ+L+P C+KS+ +AS LD+ I Y+KSLQ Q MS+GC
Sbjct: 87 EEDNTSKKIKRRCKINENLKTLQQLVPVCDKSNNQASTLDKTIRYMKSLQQHAQAMSVGC 146
Query: 370 GVVPMMFPGV 379
+ GV
Sbjct: 147 SMKTAEAAGV 156
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 276 GRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQEL 335
GR ED + AD ++R + R A + +L ++RR+RIN ++R LQ L
Sbjct: 181 GRSCCSYSSEEDSQAFQADLNAKTR----SNRWPATDPQSLYAKQRRERINARLRTLQNL 236
Query: 336 IPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
+P K D ++ML+EA+ Y+K LQLQ++++S
Sbjct: 237 VPNGTKVDISTMLEEAVRYVKFLQLQIKLLS 267
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMGCGVVPM 374
++ R RR+R+++++R LQ+L+P NK D ASMLDEA YLK L+ QVQ + ++G
Sbjct: 289 VAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLETLGTTTTTS 348
Query: 375 MFPGVQQY 382
P QQY
Sbjct: 349 KLP--QQY 354
>gi|414587589|tpg|DAA38160.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 284 HSEDVELESADAKKQSRGSTSAKRSRAAEVHNLS----ERRRRDRINEKMRALQELIPRC 339
H E + + K S K+S A ++ S ++ RR +I EKM+ALQ LIP
Sbjct: 192 HEEHISMIIYHCSKNSVTKRQTKKSLTASIYARSIQGYKQLRRSKIKEKMKALQSLIPNS 251
Query: 340 NKSDKASMLDEAIEYLKSLQ 359
NK DKASML EAIEY K+LQ
Sbjct: 252 NKIDKASMLHEAIEYPKTLQ 271
>gi|148909440|gb|ABR17818.1| unknown [Picea sitchensis]
Length = 757
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H L+ERRRR+++NEK L+ L+P K DKAS+L +AIEYLK LQ +V+ +
Sbjct: 528 HVLAERRRREKLNEKFIVLRSLVPFVTKMDKASILGDAIEYLKQLQRRVEEL 579
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMGCGVVPM 374
++ R RR+R+++++R LQ+L+P NK D ASMLDEA YLK L+ QVQ + ++G
Sbjct: 288 VAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLETLGTTTTTS 347
Query: 375 MFPGVQQY 382
P QQY
Sbjct: 348 KLP--QQY 353
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 283 YHSEDVE----LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPR 338
Y+S D E L S +K R + S K A++ +L R+RR+RIN++++ LQ L+P
Sbjct: 110 YNSSDDENALGLVSNTSKSLKRKAKSNK-GIASDPQSLYARKRRERINDRLKTLQSLVPN 168
Query: 339 CNKSDKASMLDEAIEYLKSLQLQVQMMS 366
K D ++ML++A+ Y+K LQLQ++++S
Sbjct: 169 GTKVDISTMLEDAVHYVKFLQLQIKLLS 196
>gi|218187188|gb|EEC69615.1| hypothetical protein OsI_38989 [Oryza sativa Indica Group]
Length = 205
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 320 RRRDRINEKMRALQELIPRCNKSD-KASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPG 378
+RR +INE ++ LQ+L+P C+KS+ +AS LD+ I Y+KSLQ Q MS+GC + G
Sbjct: 113 KRRCKINENLKTLQQLVPVCDKSNNQASTLDKTIRYMKSLQQHAQAMSVGCSMKTAAAAG 172
Query: 379 V 379
V
Sbjct: 173 V 173
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL+P +K ++ + MLD A++Y+K LQ QV+
Sbjct: 221 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVK 280
Query: 364 MMS 366
+S
Sbjct: 281 TLS 283
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQ+L+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 284 AKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQFK 343
Query: 364 MMS---MGCGVVPMMFPGVQQYM 383
+S C V M P Q M
Sbjct: 344 TLSDNRANCVCVNMQKPLSNQIM 366
>gi|73760264|dbj|BAE20057.1| bHLH transcription factor [Lilium hybrid division I]
Length = 686
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 310 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
A+ H +SERRRR+++NEK L+ L+P K DKAS+L + IEYLK LQ +++ +
Sbjct: 474 ASASHVISERRRREKLNEKFLVLKSLVPSITKVDKASILGDTIEYLKELQRRIEEL 529
>gi|13346180|gb|AAK19612.1|AF336279_1 GHDEL61 [Gossypium hirsutum]
Length = 624
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 41/52 (78%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H LSERRRR++INE++ L+ L+P +K+DK S+LD+ IEYL+ L+ +V+ +
Sbjct: 425 HVLSERRRREKINERLMILKSLVPTNSKADKVSILDDTIEYLQDLERRVEEL 476
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+R+ E + + + RR+RI+E++RALQEL+P K D +MLD AI Y+K +Q+Q++++
Sbjct: 192 QRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVL 251
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 273 KRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 332
KRK + + H +V + +K + S +AK S++ ++RR RINE++R L
Sbjct: 70 KRKFQVDQERDHDNEVHAALSAPRKNGKKSRAAKDSQSHYA-----KKRRQRINERLRIL 124
Query: 333 QELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 366
Q+LIP K D ++ML+EA++Y+K L LQ++++S
Sbjct: 125 QKLIPNGTKVDISTMLEEAVQYVKFLHLQIKLLS 158
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 306 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+R+ E + + + RR+RI+E++RALQEL+P K D +MLD AI Y+K +Q+Q++++
Sbjct: 192 QRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVL 251
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E++R LQEL+P K ++ + MLD A++Y+K LQ+QV+
Sbjct: 326 AKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQVK 385
Query: 364 MMSMG 368
+M+ G
Sbjct: 386 VMNDG 390
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E++R LQEL+P K ++ + MLD A++Y+K LQ+QV+
Sbjct: 329 AKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQVK 388
Query: 364 MMSMG 368
+M+ G
Sbjct: 389 VMNDG 393
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL+P +K ++ A MLD A+EY+K LQ Q +
Sbjct: 302 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQFK 361
Query: 364 MMS 366
+S
Sbjct: 362 TLS 364
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 46/62 (74%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A++ A + +++ R RR+RI+++++ LQEL+P K D +ML++AI Y+K LQLQV++
Sbjct: 360 ARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKV 419
Query: 365 MS 366
++
Sbjct: 420 LT 421
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
++ R RR+R++E++R LQ+L+P +K D ASMLDEA YLK L+ QVQ +
Sbjct: 299 VAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 348
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 47/61 (77%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
AK+ A + +++ R+RR+RI+++++ LQELIP +K D +ML++AI Y+K LQLQV++
Sbjct: 410 AKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQLQVKV 469
Query: 365 M 365
+
Sbjct: 470 L 470
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQ 361
T A+R A +++ER RR RI+E+M+ LQ+L+P +K ++ A MLDEA+EY+K LQ Q
Sbjct: 15 TRARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQ 74
Query: 362 VQMMS 366
V+ +S
Sbjct: 75 VKDLS 79
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVP 373
++ R RR+RI+E+MR LQ L+P K D ASMLDEAI Y+K L+ QVQ + P
Sbjct: 170 VAARHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEQAGANTP 227
>gi|125537287|gb|EAY83775.1| hypothetical protein OsI_38991 [Oryza sativa Indica Group]
Length = 373
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVH----NLSERRRRDRINEKMRALQELIPRCNKSDKAS 346
+S + KK+ S + K S+ NL+E+ +I E+ R LQ L+P C+KS++AS
Sbjct: 179 DSGERKKKKASSAAGKASKHHHAAAGAHNLTEKAEV-QITERFRTLQRLVPGCDKSNQAS 237
Query: 347 MLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPG 378
LD+ I+Y+KSLQ Q++ MS+ +++P
Sbjct: 238 TLDQTIQYMKSLQHQLKAMSVVGSPPALLYPA 269
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL P +K ++ A MLD A+EY+K LQ QV+
Sbjct: 335 AKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVK 394
Query: 364 MMS 366
++
Sbjct: 395 TLN 397
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
++ R RR+R++E++R LQ+L+P +K D ASMLDEA YLK L+ QVQ +
Sbjct: 298 VAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 347
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 302 STSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS-MLDEAIEYLKSLQL 360
S AKR A +L+ER RR RI+E+MR LQE++P +K S MLD A+EY+K LQ
Sbjct: 242 SIRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQK 301
Query: 361 QVQMMS 366
Q++ MS
Sbjct: 302 QLKTMS 307
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 315 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+++ R RR+RI+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 137 SVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKRQIRLL 187
>gi|77556454|gb|ABA99250.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 249
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 320 RRRDRINEKMRALQELIPRCNKSD-KASMLDEAIEYLKSLQLQVQMMSMGCGV 371
+RR +INE ++ LQ+L+P C+KS+ +AS LD+ I Y+KSLQ Q MS+GC +
Sbjct: 107 KRRCKINENLKTLQQLVPVCDKSNNQASTLDKTIRYMKSLQQHAQAMSVGCSM 159
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E+MR LQ+L+P +K ++ A MLD A+EY+K LQ QV+
Sbjct: 339 AKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQVE 398
Query: 364 MMS 366
+S
Sbjct: 399 ALS 401
>gi|18568238|gb|AAL75975.1|AF466203_4 regulatory protein [Zea mays]
gi|414585919|tpg|DAA36490.1| TPA: colored plant1 [Zea mays]
Length = 557
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
G+T + A+ H + ER+RR+++NE L+ L+P +K DKAS+L E I YLK LQ
Sbjct: 368 GTTVTAQENGAKNHVMLERKRREKLNEMFLVLKSLVPSIHKVDKASILAETIAYLKELQR 427
Query: 361 QVQMM 365
+VQ +
Sbjct: 428 RVQEL 432
>gi|380006415|gb|AFD29598.1| DEL65 [Gossypium arboreum]
Length = 620
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 304 SAKRSRAAEV---HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
+A R A E+ H LSER+RR++INE++ L+ L+P NK+DK S+LD IEYL++L+
Sbjct: 424 AAWRPEADEICGNHVLSERKRREKINERLMILKSLVPANNKADKVSILDVTIEYLQALER 483
Query: 361 QV 362
+V
Sbjct: 484 RV 485
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 296 KKQSRGSTSAKRSRAA-----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
KKQ +T + ++A ++ +++ + RR+RI+E+++ LQ+L+P +K D +ML++
Sbjct: 219 KKQCNNATKKPKPKSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKVDLVTMLEK 278
Query: 351 AIEYLKSLQLQVQMMS 366
AI Y+K LQLQV++++
Sbjct: 279 AISYVKFLQLQVKVLA 294
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+++ LQ+L PR K + A MLD A+E++K LQ QVQ
Sbjct: 363 AKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQVQ 422
Query: 364 MMS 366
++S
Sbjct: 423 ILS 425
>gi|451953538|dbj|BAM84238.1| bHLH transcription factor [Dahlia pinnata]
Length = 652
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 293 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
+D+ G T++ +A H L+ERRRR+++NE+ L+ L+P K DKAS+L + I
Sbjct: 461 SDSIASRLGKTTSHEELSAN-HVLAERRRREKLNERFIILRTLVPLVTKMDKASILGDTI 519
Query: 353 EYLKSLQLQVQMMSMGC 369
EY+K L+ +VQ + C
Sbjct: 520 EYVKQLRNKVQDLETRC 536
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 309 RAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM- 367
+A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 128 QATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 187
Query: 368 ---GCGVV 372
G G V
Sbjct: 188 RLGGAGAV 195
>gi|297840129|ref|XP_002887946.1| hypothetical protein ARALYDRAFT_474990 [Arabidopsis lyrata subsp.
lyrata]
gi|297333787|gb|EFH64205.1| hypothetical protein ARALYDRAFT_474990 [Arabidopsis lyrata subsp.
lyrata]
Length = 596
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H LSE++RR+++NE+ L+ +IP +K DK S+LD+ IEYL+ LQ +VQ +
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQELQKRVQEL 457
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 315 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+++ R RR+RI+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 105 SVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 155
>gi|13346182|gb|AAK19613.1|AF336280_1 GHDEL65 [Gossypium hirsutum]
Length = 620
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 304 SAKRSRAAEV---HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 360
+A R A E+ H LSER+RR++INE++ L+ L+P NK+DK S+LD IEYL++L+
Sbjct: 424 AAWRPEADEICGNHVLSERKRREKINERLMMLKSLVPANNKADKVSILDVTIEYLQTLER 483
Query: 361 QV 362
+V
Sbjct: 484 RV 485
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E+MR LQ+L+P +K ++ A MLD A++Y+K LQ QVQ
Sbjct: 335 AKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQ 394
Query: 364 MMS 366
+S
Sbjct: 395 TLS 397
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
R A+R +A + H+++ER RR+RI E++RALQEL+P +K+D+A+M+DE ++Y+K L+
Sbjct: 147 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSKTDRAAMIDEIVDYVKFLR 206
Query: 360 LQVQMMSM----GCGVV 372
LQV+++SM G G V
Sbjct: 207 LQVKVLSMSRLGGAGAV 223
>gi|380006417|gb|AFD29599.1| DEL61 [Gossypium arboreum]
Length = 603
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 41/52 (78%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H L+ERRRR++INE++ L+ L+P +K+DK S+LD+ IEYL+ L+ +V+ +
Sbjct: 425 HVLTERRRREKINERLTILKSLVPTNSKADKVSILDDTIEYLQDLERRVEEL 476
>gi|357143621|ref|XP_003572986.1| PREDICTED: transcription factor BIM1-like [Brachypodium distachyon]
Length = 413
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 11/78 (14%)
Query: 297 KQSRGSTSAKRSRAAEV----------HNLSERRRRDRINEKMRALQELIPRCN-KSDKA 345
K+SRG T+A RS + H+ +E+RRR +IN+++ L+EL+P C+ K DKA
Sbjct: 140 KRSRGKTTAARSSGSSADQEPSSPRSKHSATEQRRRTKINDRLDILRELLPNCDQKRDKA 199
Query: 346 SMLDEAIEYLKSLQLQVQ 363
S L E IEY++ LQ + Q
Sbjct: 200 SFLLEVIEYIRLLQEKCQ 217
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMGCGVVPM 374
++ R RR+RI+EK+R LQ+L+P +K D ASMLDEA YLK L+ QV+ + S+G V M
Sbjct: 345 VAARHRRERISEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKVDAM 404
Query: 375 MFP 377
P
Sbjct: 405 NCP 407
>gi|238908347|emb|CAZ40332.1| putative transcription factor [Raphanus sativus]
Length = 645
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H LSER+RR+++N++ L+ +IP +K+DK S+LD+ IEYL+ LQ +VQ +
Sbjct: 447 HALSERKRREKLNDRFITLRSMIPSISKTDKVSILDDTIEYLQELQRRVQEL 498
>gi|218478035|dbj|BAH03388.1| bHLH transcriptional factor [Gentiana triflora]
gi|218478037|dbj|BAH03387.1| bHLH transcriptional factor [Gentiana triflora]
Length = 661
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 300 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 359
+G TS + H LSERRRR+++NE+ L+ L+P K DKAS+L + IEY+K L+
Sbjct: 463 KGGTSQEVLIGGANHVLSERRRREKLNERFITLRSLVPFVTKMDKASVLGDTIEYVKQLR 522
Query: 360 LQVQMM 365
++Q +
Sbjct: 523 KKIQEL 528
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 315 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+++ R RR+RI++++R LQ L+P K D ASMLDEAI Y+K L+LQ+Q +
Sbjct: 444 SVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQTL 494
>gi|2335192|gb|AAB72192.1| bHLH protein [Arabidopsis thaliana]
Length = 597
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H LSE++RR+++NE+ L+ +IP +K DK S+LD+ IEYL+ LQ +VQ +
Sbjct: 407 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL 458
>gi|218188514|gb|EEC70941.1| hypothetical protein OsI_02533 [Oryza sativa Indica Group]
Length = 448
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 297 KQSRGSTSAKRSRAA----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 352
K++ G A +RAA + H +SERRRR+++NE L+ L+P +K DKAS+L E I
Sbjct: 268 KKAVGGGGAWMNRAAGSSIKNHVMSERRRREKLNEMFLTLKSLVPSIDKVDKASILAETI 327
Query: 353 EYLKSLQLQVQMMSMG 368
YLK L+ +VQ + G
Sbjct: 328 AYLKELERRVQELESG 343
>gi|15222504|ref|NP_176552.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|42571979|ref|NP_974080.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|334183608|ref|NP_001185302.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|34222624|sp|Q9CAD0.1|EGL1_ARATH RecName: Full=Transcription factor EGL1; AltName: Full=Basic
helix-loop-helix protein 2; Short=AtMYC146;
Short=AtbHLH2; Short=bHLH 2; AltName: Full=Protein
ENHANCER OF GLABRA 3; AltName: Full=Transcription factor
EN 30; AltName: Full=bHLH transcription factor bHLH002
gi|12324939|gb|AAG52418.1|AC011622_6 putative transcription factor; 68971-66046 [Arabidopsis thaliana]
gi|18026952|gb|AAL55709.1|AF251687_1 putative transcription factor BHLH2 [Arabidopsis thaliana]
gi|225898046|dbj|BAH30355.1| hypothetical protein [Arabidopsis thaliana]
gi|332196003|gb|AEE34124.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|332196004|gb|AEE34125.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|332196005|gb|AEE34126.1| transcription factor EGL1 [Arabidopsis thaliana]
Length = 596
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H LSE++RR+++NE+ L+ +IP +K DK S+LD+ IEYL+ LQ +VQ +
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL 457
>gi|125526531|gb|EAY74645.1| hypothetical protein OsI_02537 [Oryza sativa Indica Group]
Length = 420
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 297 KQSRGSTSAKRSRAA-----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEA 351
K+ G A +RAA + H +SERRRR+++NE L+ L+P +K DKAS+L E
Sbjct: 217 KKVVGGGGAWMNRAAGSCSIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSET 276
Query: 352 IEYLKSLQLQVQMMSMG 368
I YLK L+ +VQ + G
Sbjct: 277 IAYLKELERRVQELESG 293
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 291 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLD 349
E+ + K + A+R +A + H+L+ER RR +INEK++ LQ ++P C K+ A MLD
Sbjct: 143 ETEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLD 202
Query: 350 EAIEYLKSLQL 360
E I Y SL+L
Sbjct: 203 EIINYFLSLKL 213
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVP 373
+++ R RR+RI++++R LQ L+P K D ASMLDEAI Y+K L+LQ+Q+ C +VP
Sbjct: 7 QSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQVCDT-CNLVP 65
Query: 374 M 374
+
Sbjct: 66 V 66
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 45/61 (73%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A++ A + +++ R RR+RI+E+++ LQ LIP +K D +ML++AI Y++ L+LQ++M
Sbjct: 756 ARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIKM 815
Query: 365 M 365
+
Sbjct: 816 L 816
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 38/47 (80%)
Query: 319 RRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
R+RR+RINE+++ LQ L+P K D ++ML+EA+ Y+K LQLQ++++
Sbjct: 229 RKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLI 275
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQ+L P +K ++ A MLD A+EY+K LQ QV+
Sbjct: 352 AKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQVK 411
Query: 364 MM 365
+
Sbjct: 412 TL 413
>gi|147864191|emb|CAN78817.1| hypothetical protein VITISV_041734 [Vitis vinifera]
Length = 367
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 25/99 (25%)
Query: 272 RKRKGRETDDE---YHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEK 328
R K + TD++ + + + E + K Q+ S S +RSRAA +HN SER
Sbjct: 149 RSLKAKTTDEDSACHGGSENQDEDRETKTQTGRSHSTRRSRAAAIHNQSER--------- 199
Query: 329 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 367
+DKASMLDE IEYLK LQ QVQMMS+
Sbjct: 200 -------------TDKASMLDEVIEYLKQLQAQVQMMSV 225
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 295 AKKQSRGSTSAKRSRAA----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
+KK S G+ + +A + +L+ + RR+RI+E+++ LQEL+P K D +ML++
Sbjct: 121 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 180
Query: 351 AIEYLKSLQLQVQMMS 366
AI Y+K LQ+QV++++
Sbjct: 181 AIGYVKFLQVQVKVLA 196
>gi|414591460|tpg|DAA42031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 519
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 283 YHSEDVELESADA-KKQSRGSTS-------AKRSRAAEVHNLSERRRRDRINEKMRALQE 334
Y SED D+ KK +GS + KR R + ++ERRRR ++N+++ L+
Sbjct: 285 YDSEDACRGVEDSGKKDGKGSNANSAGDGKGKRKRLPAKNLMAERRRRKKLNDRLYMLRS 344
Query: 335 LIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
++P+ +K D+AS+L +AIEYLK L +++
Sbjct: 345 VVPKISKMDRASILGDAIEYLKELLRKIE 373
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI++++R LQEL+P +K ++ A ML+EA+EY+K LQ Q+Q
Sbjct: 188 AKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQ 247
Query: 364 MMS---MGCGVVP 373
++ C +P
Sbjct: 248 ELTEEQKRCTCIP 260
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 39/175 (22%)
Query: 226 AATSSGGGGGSSGARDLTMCEMTVTSSP---GGSSASAEPPA---QKPAAED-------- 271
+TSSG G +S + M ++ +P GGS A E + +KPA E
Sbjct: 98 VSTSSGSGMNASNGK-----RMKISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQ 152
Query: 272 -----RKRKGRETDDEYHSEDVEL-------------ESADAKKQSRGSTSAKRSRAAEV 313
R R+G+ TD +E V + K+ S R R V
Sbjct: 153 DYIHVRARRGQATDSHSLAERVMQFYTLLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGV 212
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 367
++ RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+ +SM
Sbjct: 213 -SVYINARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 266
>gi|52075730|dbj|BAD44950.1| regulatory protein B-Peru-like [Oryza sativa Japonica Group]
gi|52077560|dbj|BAD45121.1| regulatory protein B-Peru-like [Oryza sativa Japonica Group]
Length = 370
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV 371
H +SERRRR+++NE L+ L+P +K DKAS+L E I YLK L+ +VQ + G V
Sbjct: 189 HVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKV 246
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL P +K ++ A MLD A+EY+K LQ QV+
Sbjct: 173 AKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVK 232
Query: 364 MMS 366
++
Sbjct: 233 TLN 235
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+++ R RR+RI+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 148 QSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 199
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI++++R LQEL+P +K ++ A ML+EA+EY+K LQ Q+Q
Sbjct: 186 AKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQ 245
Query: 364 MMS---MGCGVVP 373
++ C +P
Sbjct: 246 ELTEEQKRCTCIP 258
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E+MR LQ+L+P +K ++ A MLD A++Y+K LQ QVQ
Sbjct: 332 AKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQ 391
Query: 364 MMS 366
+S
Sbjct: 392 TLS 394
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E++R LQEL+P K ++ A MLD A++Y+K LQ QV+
Sbjct: 162 AKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVK 221
Query: 364 MMSMG 368
+++ G
Sbjct: 222 VLNDG 226
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
++ R RR+RI+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 137 VAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 186
>gi|172034194|gb|ACB69502.1| ICE87 [Triticum aestivum]
Length = 443
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 41/50 (82%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
++ERRRR ++N+++ AL+ ++PR +K D+AS+L +AIEYLK L+ ++ ++
Sbjct: 260 MAERRRRKKLNDRLYALRSVVPRISKMDRASILGDAIEYLKELKQKINVL 309
>gi|297841535|ref|XP_002888649.1| hypothetical protein ARALYDRAFT_475944 [Arabidopsis lyrata subsp.
lyrata]
gi|297334490|gb|EFH64908.1| hypothetical protein ARALYDRAFT_475944 [Arabidopsis lyrata subsp.
lyrata]
Length = 194
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 277 RETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELI 336
+ +D E H E+ + ES AKR R+ E + E++RR IN K+ LQ ++
Sbjct: 53 KNSDHEKHGEEQDEESYRM---------AKRQRSMEYRMMMEKKRRKEINNKVDILQGMM 103
Query: 337 P-RCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPM 374
P R K D AS L+ IEY+KSL+ QV +M M P+
Sbjct: 104 PNRSPKPDLASKLEHIIEYIKSLKYQVDVMYMAYTATPV 142
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 315 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+++ R RR+RI+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 141 SVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 191
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL+P +K ++ A MLD A+EY+K LQ Q
Sbjct: 323 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYN 382
Query: 364 MMS 366
++
Sbjct: 383 TLT 385
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 296 KKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYL 355
KKQ S +AK ++ ++ + RR+RI+E+++ LQEL+P +K D +ML++AI Y+
Sbjct: 179 KKQKPKSATAKDPQS-----IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 233
Query: 356 KSLQLQVQMMS 366
K LQLQV++++
Sbjct: 234 KFLQLQVKILA 244
>gi|300394152|gb|ADK11703.1| enhancer of glabra 3 [Brassica rapa subsp. rapa]
Length = 597
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H LSER+RR+++N++ L+ +IP +K DK S+LD+ IEYL+ LQ +VQ +
Sbjct: 410 HALSERKRREKLNDRFMTLRSMIPSISKIDKVSILDDTIEYLQELQRRVQEL 461
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E++R LQEL+P K ++ A MLD A++Y+K LQ QV+
Sbjct: 327 AKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVK 386
Query: 364 MMSMG 368
+++ G
Sbjct: 387 VLNDG 391
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 315 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+++ R RR+RI+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 121 SIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 295 AKKQSRGSTSAKRSRAA----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
+KK S G+ + +A + +L+ + RR+RI+E+++ LQEL+P K D +ML++
Sbjct: 189 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 248
Query: 351 AIEYLKSLQLQVQMMS 366
AI Y+K LQ+QV++++
Sbjct: 249 AIGYVKFLQVQVKVLA 264
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E++R LQEL+P +K ++ A MLD A++Y+K LQ QV+
Sbjct: 309 AKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVK 368
Query: 364 MMS 366
+++
Sbjct: 369 VIN 371
>gi|389827984|gb|AFL02462.1| transcription factor MYC1 [Fragaria x ananassa]
Length = 368
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H L ER+RR+++NE+ L+ L+P K DK S+LD+AIEYLK L+ +V+ +
Sbjct: 170 HVLCERKRREKLNERFSILKSLVPSIRKDDKVSILDDAIEYLKDLEKKVEEL 221
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 44/60 (73%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A++ A + +++ R RR+RI+++++ LQEL+P K D +ML++AI Y+K LQLQV++
Sbjct: 360 ARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKV 419
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL+P +K ++ A MLD A+EY+K LQ Q
Sbjct: 312 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYN 371
Query: 364 MMS 366
++
Sbjct: 372 TLT 374
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 311 AEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 367
A +++ + RR+RI+E+MR LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM
Sbjct: 69 ASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 126
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL+P +K ++ + MLD A++Y+K LQ QV+
Sbjct: 364 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVK 423
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 273 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYK 332
Query: 364 MMS 366
+S
Sbjct: 333 TLS 335
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
++ R RR+RI+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 122 VAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAILYVKFLKRQIRLL 171
>gi|451953540|dbj|BAM84239.1| bHLH transcription factor [Dahlia pinnata]
Length = 651
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGC 369
H L+ERRRR+++NE+ L+ L+P K DKAS+L + IEY+K L+ +VQ + C
Sbjct: 480 HVLAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLETRC 535
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI++++R LQEL+P +K ++ A ML+EA+EY+K+LQ Q+Q
Sbjct: 180 AKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQIQ 239
Query: 364 MMS 366
++
Sbjct: 240 ELT 242
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR +I+E+MR LQ+L+P +K ++ + MLD A+EY+K LQ QV+
Sbjct: 357 AKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQVE 416
Query: 364 MMS 366
+S
Sbjct: 417 TLS 419
>gi|451953542|dbj|BAM84240.1| bHLH transcription factor [Dahlia pinnata]
Length = 649
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGC 369
H L+ERRRR+++NE+ L+ L+P K DKAS+L + IEY+K L+ +VQ + C
Sbjct: 478 HVLAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLETRC 533
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E++R LQEL+P +K ++ A MLD A++Y+K LQ QV+
Sbjct: 302 AKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVK 361
Query: 364 MM 365
++
Sbjct: 362 VI 363
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 295 AKKQSRGSTSAKRSRAA----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
+KK S G+ + +A + +L+ + RR+RI+E+++ LQEL+P K D +ML++
Sbjct: 189 SKKPSSGTNGEAKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 248
Query: 351 AIEYLKSLQLQVQMMS 366
AI Y+K LQ+QV++++
Sbjct: 249 AIGYVKFLQVQVKVLA 264
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL P +K ++ A MLD A+E++K LQ QV+
Sbjct: 339 AKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQVK 398
Query: 364 MMS 366
++
Sbjct: 399 TLT 401
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 7/65 (10%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-------DKASMLDEAIEYLKS 357
AKR A +++ER RR RI+E+MR LQEL+P +KS + + MLDEA+EY+K
Sbjct: 418 AKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYMKF 477
Query: 358 LQLQV 362
LQ QV
Sbjct: 478 LQKQV 482
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQEL+P +K ++ A MLD A+EY+K LQ Q
Sbjct: 198 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYN 257
Query: 364 MMS 366
++
Sbjct: 258 TLT 260
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK------SDKASMLDEAIEYLKSL 358
A+R +A + H+++ER RR++I ++R LQ+L+P C K A MLDE I Y+ SL
Sbjct: 150 ARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLDEIINYVHSL 209
Query: 359 QLQVQMMS 366
Q QV+ +S
Sbjct: 210 QNQVEFLS 217
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI++++R LQEL+P +K ++ A ML+EA+EY+K+LQ Q+Q
Sbjct: 183 AKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQ 242
Query: 364 MMS 366
++
Sbjct: 243 ELT 245
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 295 AKKQSRGSTSAKRSRAA---EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEA 351
KKQ +T ++ + + + +++ + RR+RI+E+++ LQEL+P +K D +ML++A
Sbjct: 214 VKKQCNSATKKQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKA 273
Query: 352 IEYLKSLQLQVQMMS 366
I Y+K LQLQV++++
Sbjct: 274 ISYVKFLQLQVKVLA 288
>gi|451953544|dbj|BAM84241.1| bHLH transcription factor [Dahlia pinnata]
Length = 658
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGC 369
H L+ERRRR+++NE+ L+ L+P K DKAS+L + IEY+K L+ +VQ + C
Sbjct: 487 HVLAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLETRC 542
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E++R LQEL+P K ++ A MLD A++Y+K LQ QV+
Sbjct: 321 AKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVK 380
Query: 364 MMS 366
+++
Sbjct: 381 VLN 383
>gi|312222653|dbj|BAJ33515.1| bHLH transcriptional factor [Dahlia pinnata]
gi|312222663|dbj|BAJ33520.1| bHLH transcriptional factor [Dahlia pinnata]
Length = 649
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGC 369
H L+ERRRR+++NE+ L+ L+P K DKAS+L + IEY+K L+ +VQ + C
Sbjct: 478 HVLAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLEARC 533
>gi|6899919|emb|CAB71869.1| putative protein [Arabidopsis thaliana]
Length = 359
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS--DKASMLDEAIEYLKSLQLQV 362
KR R AE +N ER + +Q ++ + + D SMLDEAI Y+ +LQLQV
Sbjct: 184 VKRKRNAEAYNSPERV------SNLFKIQSIVNTESDTTDDNESMLDEAINYMTNLQLQV 237
Query: 363 QMMSMGCGVV--PMMFPGVQQYMPNMGMGIGMGMGMG 397
QMM+MG V MM P Y MG+ +G+GM MG
Sbjct: 238 QMMTMGNRFVTPSMMMPLGPNY-SQMGLAMGVGMQMG 273
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E+MR LQ+L+P +K ++ + MLD A++Y+K LQ QV+
Sbjct: 341 AKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQVE 400
Query: 364 MMS 366
+S
Sbjct: 401 TLS 403
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
++ R RR+RI+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 127 VAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIKLL 176
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI++++R LQEL+P +K ++ A ML+EA+EY+K LQ Q+Q
Sbjct: 185 AKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQKQIQ 244
Query: 364 MMS 366
++
Sbjct: 245 ELT 247
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E++R LQEL+P K ++ A MLD A++Y+K LQ QV+
Sbjct: 320 AKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVK 379
Query: 364 MMS 366
+++
Sbjct: 380 VLN 382
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 44/61 (72%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 364
A++ A + +++ R RR+RI+E+++ LQ LIP +K D +ML++AI Y++ L+ Q++M
Sbjct: 641 ARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQIKM 700
Query: 365 M 365
+
Sbjct: 701 L 701
>gi|297597059|ref|NP_001043392.2| Os01g0577300 [Oryza sativa Japonica Group]
gi|125570917|gb|EAZ12432.1| hypothetical protein OsJ_02326 [Oryza sativa Japonica Group]
gi|255673385|dbj|BAF05306.2| Os01g0577300 [Oryza sativa Japonica Group]
Length = 265
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 368
H +SERRRR+++NE L+ L+P +K DKAS+L E I YLK L+ +VQ + G
Sbjct: 84 HVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESG 138
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 315 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCG 370
+++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ + G
Sbjct: 165 SVAARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELHSAGG 220
>gi|145334931|ref|NP_001078811.1| transcription factor ALC [Arabidopsis thaliana]
gi|332010920|gb|AED98303.1| transcription factor ALC [Arabidopsis thaliana]
Length = 188
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 24/78 (30%)
Query: 304 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
S KR+ A+ HNLSE K+DKASMLDEAIEYLK LQLQVQ
Sbjct: 88 SLKRNIDAQFHNLSE----------------------KTDKASMLDEAIEYLKQLQLQVQ 125
Query: 364 MMSM--GCGVVPMMFPGV 379
+++ G G+ PM P V
Sbjct: 126 TLAVMNGLGLNPMRLPQV 143
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 315 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
+++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ
Sbjct: 165 SVAARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQ 213
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 315 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
+++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ
Sbjct: 164 SVAARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQ 212
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
++ R+RR+RI+E++R LQ+L+P K D ASMLDEA YL+ LQ QV+
Sbjct: 325 QTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQSQVR 374
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+E++R LQEL+P K ++ A MLD A++Y+K LQ QV+
Sbjct: 299 AKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVK 358
Query: 364 MMS 366
+++
Sbjct: 359 VLN 361
>gi|356536767|ref|XP_003536906.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 654
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 292 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEA 351
+AD K + +G A + + H L+ERRRR+++NE+ L+ L+P K DKAS+L +
Sbjct: 445 AADTKLRGKG---APQEELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDT 501
Query: 352 IEYLKSLQLQVQMM 365
IEY+K L+ ++Q +
Sbjct: 502 IEYVKQLRRKIQEL 515
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 305 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 363
AKR A +++ER RR RI+ +++ LQ+L P+ +K + A MLD A+EY+K LQ QV+
Sbjct: 358 AKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQVK 417
Query: 364 MM 365
M+
Sbjct: 418 ML 419
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 21/133 (15%)
Query: 238 GARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKK 297
G +D + TV ++ G + S P K A R G T +KK
Sbjct: 143 GQKDWLYSDSTVVTT-GSRNESLSP---KSAGNKRSHTGEST-------------QPSKK 185
Query: 298 QSRGSTSAKRSRAA----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 353
S G T + + + +L+ + RR+RI+E+++ LQEL+P K D +ML++AI
Sbjct: 186 LSSGVTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAIS 245
Query: 354 YLKSLQLQVQMMS 366
Y+K LQ+QV++++
Sbjct: 246 YVKFLQVQVKVLA 258
>gi|224082760|ref|XP_002306828.1| predicted protein [Populus trichocarpa]
gi|222856277|gb|EEE93824.1| predicted protein [Populus trichocarpa]
Length = 466
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%)
Query: 279 TDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPR 338
TD +Y +D+ + + K + RG A H +ER+RR+++N++ AL+ ++P
Sbjct: 287 TDQDYPKDDLSPQGDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPN 346
Query: 339 CNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 372
+K DKAS+L +AI ++ LQ +++++ GVV
Sbjct: 347 ISKMDKASLLGDAITFITDLQKKIRVLETERGVV 380
>gi|308084333|gb|ADO13282.1| bHLH [Pisum sativum]
Length = 652
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 290 LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 349
+ S D + RG + + +A H L+ERRRR+++NE+ L+ L+P K DKAS+L
Sbjct: 446 VNSNDPSARLRGKGTPQDELSAN-HVLAERRRREKLNERFIILRSLVPFVTKMDKASILG 504
Query: 350 EAIEYLKSLQLQVQ 363
+ IEYLK L+ ++Q
Sbjct: 505 DTIEYLKQLRRKIQ 518
>gi|297742516|emb|CBI34665.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
H LSER+RR++INE+ L+ L+P N+ +K S+LD+ IEYLK L+ +V+ +
Sbjct: 345 HVLSERKRREKINERFSVLRSLVPSINQVNKVSVLDDTIEYLKELKRRVEEL 396
>gi|217074640|gb|ACJ85680.1| unknown [Medicago truncatula]
gi|388490634|gb|AFK33383.1| unknown [Medicago truncatula]
Length = 335
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN-KSDKASMLDEAIEYLKSLQ 359
G + K S H+++E+RRR +INE+ + L++LIP+C+ K D AS L E IEY++ LQ
Sbjct: 36 GKATDKASVIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQYLQ 95
Query: 360 LQVQ 363
+VQ
Sbjct: 96 ERVQ 99
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS-MGCGVV 372
+++ R RR+RI++++R LQ +P K D ASMLDEAI Y+K LQ Q+Q + +G
Sbjct: 393 QSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQQLQTLERIGNMSD 452
Query: 373 P--MMFPGVQQYMPNMGMGIGM 392
P M PG +P +G M
Sbjct: 453 PRFMTQPGGPMILPQVGASTSM 474
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 44/67 (65%)
Query: 299 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 358
+ G AKR A + ++ R RR++INE+++ LQ L+P + D +ML+EAI ++K L
Sbjct: 466 TNGRPRAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFL 525
Query: 359 QLQVQMM 365
+ Q++++
Sbjct: 526 EFQLELL 532
>gi|357488103|ref|XP_003614339.1| Transcription factor BIM2 [Medicago truncatula]
gi|355515674|gb|AES97297.1| Transcription factor BIM2 [Medicago truncatula]
Length = 335
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 301 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN-KSDKASMLDEAIEYLKSLQ 359
G + K S H+++E+RRR +INE+ + L++LIP+C+ K D AS L E IEY++ LQ
Sbjct: 36 GKATDKASVIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQYLQ 95
Query: 360 LQVQ 363
+VQ
Sbjct: 96 ERVQ 99
>gi|168041399|ref|XP_001773179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675538|gb|EDQ62032.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 550
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
Query: 276 GRETDDEYHSEDVELESADAK------KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 329
G DD +++ +S+D ++ G SA+R + + ++ER+RR ++NE++
Sbjct: 275 GLSKDDGEVKQEIRGDSSDCSDPMEDDEEKGGPRSARRHLSKNL--VAERKRRKKLNERL 332
Query: 330 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 363
+L+ L+P+ K D+AS+L +AIEY+K LQ QV+
Sbjct: 333 YSLRALVPKITKMDRASILGDAIEYVKELQQQVK 366
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 316 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
++ R RR+RI+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++ +
Sbjct: 131 VAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRFL 180
>gi|226493661|ref|NP_001146007.1| uncharacterized protein LOC100279537 [Zea mays]
gi|219885297|gb|ACL53023.1| unknown [Zea mays]
gi|414881515|tpg|DAA58646.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 426
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 292 SADAKKQSRGSTSAKRSRAAEV-HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 350
SA A++Q +A + +++V H +SER+RR+++N+ L+ L+P C+K DK ++L
Sbjct: 209 SAAARQQDDACMAAGSNNSSQVYHMISERKRREKLNDSFHTLRSLLPPCSKKDKTTVLTN 268
Query: 351 AIEYLKSLQLQV 362
A YLK+L+ QV
Sbjct: 269 AASYLKALEAQV 280
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 303 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQ 361
T AKR A +++ER RR +I+E+M+ LQ+L+P +K ++ + MLDE +EY+KSLQ +
Sbjct: 32 TRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQRK 91
Query: 362 VQMMS 366
VQ +S
Sbjct: 92 VQELS 96
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 314 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 365
+++ R RR+RI++K+R LQ L+P K D ASMLDEA+ Y+K L+ QVQ +
Sbjct: 117 QSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTL 168
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.126 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,426,394,745
Number of Sequences: 23463169
Number of extensions: 276808138
Number of successful extensions: 2452315
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3532
Number of HSP's successfully gapped in prelim test: 11087
Number of HSP's that attempted gapping in prelim test: 2367766
Number of HSP's gapped (non-prelim): 70599
length of query: 403
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 258
effective length of database: 8,957,035,862
effective search space: 2310915252396
effective search space used: 2310915252396
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)