Query 015641
Match_columns 403
No_of_seqs 218 out of 362
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 16:08:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015641.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015641hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eml_A Human adenosine A2A rec 33.3 2.1E+02 0.0072 27.2 10.0 28 362-390 200-227 (488)
2 3rko_A NADH-quinone oxidoreduc 25.8 3.1E+02 0.011 23.4 9.8 59 252-322 64-123 (147)
3 3vw7_A Proteinase-activated re 23.0 4.6E+02 0.016 24.9 10.3 23 363-386 197-219 (484)
4 3uon_A Human M2 muscarinic ace 21.1 5.2E+02 0.018 24.2 11.3 24 362-386 194-217 (467)
5 4eiy_A Adenosine receptor A2A/ 20.3 5.3E+02 0.018 24.0 13.5 31 361-392 209-239 (447)
6 2rdd_B UPF0092 membrane protei 18.6 1.4E+02 0.0046 19.5 3.7 27 362-388 4-30 (37)
7 2ej7_A HCG3 gene; HCG3 protein 17.2 28 0.00095 26.3 -0.0 13 391-403 29-41 (82)
8 1hdj_A Human HSP40, HDJ-1; mol 16.3 29 0.00098 25.9 -0.1 13 391-403 23-35 (77)
9 3dd7_B PHD, prevent HOST death 15.0 1.2E+02 0.004 18.3 2.3 18 375-392 6-23 (23)
10 2ctp_A DNAJ homolog subfamily 14.8 34 0.0012 25.5 -0.0 13 391-403 27-39 (78)
No 1
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=33.25 E-value=2.1e+02 Score=27.21 Aligned_cols=28 Identities=25% Similarity=0.399 Sum_probs=17.1
Q ss_pred ehhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015641 362 FFVLPVTVLDVCFILWIFSSLSRTLEKLQ 390 (403)
Q Consensus 362 ~~~lPla~~~~~f~~WIf~SL~~T~~~L~ 390 (403)
..++|+. +..+.|.-|+..+.+..++.+
T Consensus 200 ~~~~P~~-ii~~~y~~I~~~l~~~~~~~~ 227 (488)
T 3eml_A 200 CVLVPLL-LMLGVYLRIFLAARRQLNIFE 227 (488)
T ss_dssp HTHHHHH-HHHHHHHHHHHHHTCCCCHHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHhHHH
Confidence 3456774 556667788777765444433
No 2
>3rko_A NADH-quinone oxidoreductase subunit A; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli}
Probab=25.83 E-value=3.1e+02 Score=23.45 Aligned_cols=59 Identities=12% Similarity=0.199 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhhhhcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhccceeeecc
Q 015641 252 IQLHYYITGVIALGM-CEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTL 322 (403)
Q Consensus 252 l~Iq~~I~avi~l~~-le~~~~~~~y~~~N~~G~~~~~~~v~~~il~a~k~tls~~LlLlVsmGyGVVkp~L 322 (403)
.++|+|+.|++++.. +|.++-+---...+.. ++ ...-..+.|+++|++++=|---+=.|
T Consensus 64 FsirFfLiAilFlIFDvEi~~L~Pwa~~~~~~-----~~-------~~~~~~~~Fl~iL~~Gl~yEW~~GaL 123 (147)
T 3rko_A 64 LSAKFYLVAMFFVIFDVEALYLFAWSTSIRES-----GW-------VGFVEAAIFIFVLLAGLVYLVRIGAL 123 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSTTT-----HH-------HHHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hH-------HHHHHHHHHHHHHHHHHHHHHHcCCe
Confidence 899999999988764 8888754311111111 11 11122456777777777664444333
No 3
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=23.01 E-value=4.6e+02 Score=24.86 Aligned_cols=23 Identities=22% Similarity=0.424 Sum_probs=14.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHH
Q 015641 363 FVLPVTVLDVCFILWIFSSLSRTL 386 (403)
Q Consensus 363 ~~lPla~~~~~f~~WIf~SL~~T~ 386 (403)
.++|+. +..+.|.-|+..|.+.-
T Consensus 197 ~~~P~~-ii~~~Y~~I~~~l~~~~ 219 (484)
T 3vw7_A 197 FFVPLI-ISTVCYVSIIRCLSSSA 219 (484)
T ss_dssp HHHHHH-HHHHHHHHHHHHTTSCC
T ss_pred HhHHHH-HHHHHHHHHHHHHhHhh
Confidence 456764 45566777777766443
No 4
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=21.13 E-value=5.2e+02 Score=24.25 Aligned_cols=24 Identities=21% Similarity=0.281 Sum_probs=15.2
Q ss_pred ehhhHHHHHHHHHHHHHHHHHHHHH
Q 015641 362 FFVLPVTVLDVCFILWIFSSLSRTL 386 (403)
Q Consensus 362 ~~~lPla~~~~~f~~WIf~SL~~T~ 386 (403)
..++|+. +..+.|+.|+..+.+..
T Consensus 194 ~~~~p~~-ii~~~y~~I~~~l~~~~ 217 (467)
T 3uon_A 194 AFYLPVI-IMTVLYWHISRASKSRI 217 (467)
T ss_dssp HTHHHHH-HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHhh
Confidence 4566774 55666777777776443
No 5
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=20.28 E-value=5.3e+02 Score=24.01 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=23.0
Q ss_pred eehhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015641 361 LFFVLPVTVLDVCFILWIFSSLSRTLEKLQVM 392 (403)
Q Consensus 361 l~~~lPla~~~~~f~~WIf~SL~~T~~~L~~r 392 (403)
+..++|+. +..+.|.-|+..+.+..++.+.+
T Consensus 209 ~~~~lP~~-ii~~~y~~I~~~l~~~~~~~~~~ 239 (447)
T 4eiy_A 209 ACVLVPLL-LMLGVYLRIFLAARRQLADLEDN 239 (447)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhh
Confidence 34578885 55777899999998887777653
No 6
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=18.61 E-value=1.4e+02 Score=19.54 Aligned_cols=27 Identities=15% Similarity=0.342 Sum_probs=17.4
Q ss_pred ehhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015641 362 FFVLPVTVLDVCFILWIFSSLSRTLEK 388 (403)
Q Consensus 362 ~~~lPla~~~~~f~~WIf~SL~~T~~~ 388 (403)
..++|+.++-++||+.+++-=.+--|+
T Consensus 4 ~~~l~~v~~~~ifYFl~iRPQ~Kr~K~ 30 (37)
T 2rdd_B 4 SLILMLVVFGLIFYFMILRPQQKRTKE 30 (37)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 346788777788887776655444333
No 7
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=17.15 E-value=28 Score=26.27 Aligned_cols=13 Identities=31% Similarity=0.608 Sum_probs=10.4
Q ss_pred hhcceecccCCCC
Q 015641 391 VMFCVMLSFHPDR 403 (403)
Q Consensus 391 ~rrq~~~~~~~~~ 403 (403)
..|+.++.+||||
T Consensus 29 ayr~l~~~~HPDk 41 (82)
T 2ej7_A 29 AYRKLALKWHPDK 41 (82)
T ss_dssp HHHHHHTTSCTTT
T ss_pred HHHHHHHHHCcCC
Confidence 5667788999996
No 8
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=16.28 E-value=29 Score=25.90 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=10.5
Q ss_pred hhcceecccCCCC
Q 015641 391 VMFCVMLSFHPDR 403 (403)
Q Consensus 391 ~rrq~~~~~~~~~ 403 (403)
..|+.++.+||||
T Consensus 23 ayr~l~~~~HPD~ 35 (77)
T 1hdj_A 23 AYRRQALRYHPDK 35 (77)
T ss_dssp HHHHHHHTTCTTT
T ss_pred HHHHHHHHHCcCC
Confidence 5677788999996
No 9
>3dd7_B PHD, prevent HOST death protein; all alpha, ribosome inhibitor; HET: MSE; 1.70A {Enterobacteria phage P1}
Probab=14.97 E-value=1.2e+02 Score=18.26 Aligned_cols=18 Identities=17% Similarity=0.222 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHhh...
Q 015641 375 ILWIFSSLSRTLEKLQVM... 392 (403)
Q Consensus 375 ~~WIf~SL~~T~~~L~~r... 392 (403)
+-|||....+|++.|..|
T Consensus 6 FaaIm~~hg~t~~~L~dR... 23 (23)
T 3dd7_B 6 FASLFDTLDSTNKEMVNRxxx 26 (26)
T ss_pred HHHHHHHHhHHHHHHhcC...
Confidence 458999999999999875
No 10
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=14.83 E-value=34 Score=25.51 Aligned_cols=13 Identities=38% Similarity=0.710 Sum_probs=10.2
Q ss_pred hhcceecccCCCC
Q 015641 391 VMFCVMLSFHPDR 403 (403)
Q Consensus 391 ~rrq~~~~~~~~~ 403 (403)
..|+.++.+|||+
T Consensus 27 ayr~l~~~~HPDk 39 (78)
T 2ctp_A 27 AYRRLALKFHPDK 39 (78)
T ss_dssp HHHHHHTTSCTTT
T ss_pred HHHHHHHHHCcCC
Confidence 4567788899996
Done!