Query 015641
Match_columns 403
No_of_seqs 218 out of 362
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 16:08:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015641.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015641hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1alya_ b.22.1.1 (A:) Extracel 29.9 41 0.003 26.4 5.8 37 177-213 45-85 (146)
2 d1m56c_ f.25.1.1 (C:) Bacteria 16.8 2.9E+02 0.021 23.3 11.5 59 222-280 131-189 (265)
3 d1kxga_ b.22.1.1 (A:) Soluble 16.1 1E+02 0.0074 24.0 5.5 36 175-212 41-76 (144)
4 d1i3za_ d.93.1.1 (A:) Ews/fli1 15.3 1.2E+02 0.0086 21.9 5.3 42 141-189 23-66 (103)
5 d1fafa_ a.2.3.1 (A:) Large T a 14.9 11 0.00079 27.4 -1.0 14 390-403 32-45 (79)
6 d1dg6a_ b.22.1.1 (A:) Apoptosi 14.2 1.4E+02 0.01 23.4 5.9 19 175-193 52-70 (162)
7 d1v54c_ f.25.1.1 (C:) Mitochon 13.8 3.4E+02 0.025 22.8 10.7 61 223-284 127-187 (259)
8 d1a81a1 d.93.1.1 (A:9-137) Syk 13.6 1.3E+02 0.0092 23.0 5.3 43 139-188 24-68 (129)
9 d1fpoa1 a.2.3.1 (A:1-76) HSC20 13.3 13 0.00092 26.3 -1.1 13 391-403 23-35 (76)
10 d1wjza_ a.2.3.1 (A:) CSL-type 13.2 20 0.0015 26.4 0.1 14 390-403 35-48 (94)
No 1
>d1alya_ b.22.1.1 (A:) Extracellular domain of CD40 ligand {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.93 E-value=41 Score=26.44 Aligned_cols=37 Identities=19% Similarity=0.371 Sum_probs=25.5
Q ss_pred eEEeCCCceEEEEEEEeC----CCCCceEEEEEEEEECCCC
Q 015641 177 EVEIERTGMYYLYFMYCD----PQLKGTMIKGRTVWKNPDG 213 (403)
Q Consensus 177 ~y~I~~tG~Y~v~~~~C~----~~~~~~~~~g~v~f~NpyG 213 (403)
...|+++|+|.||...+- +......+...+..+++.+
T Consensus 45 ~L~V~~~G~Y~VYsQv~f~~~~~~~~~~~~~~~v~~~~~~~ 85 (146)
T d1alya_ 45 QLTVKRQGLYYIYAQVTFCSNREASSQAPFIASLCLKSPGR 85 (146)
T ss_dssp EEEESSCEEEEEEEEEEEEECTTTSCSSEEEEEEEECCTTS
T ss_pred EEEeCCCeEEEEEEEEEEeccCCCCCceeEEEEEEEEcCCC
Confidence 589999999999976542 2223446777777777654
No 2
>d1m56c_ f.25.1.1 (C:) Bacterial aa3 type cytochrome c oxidase subunit III {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=16.81 E-value=2.9e+02 Score=23.27 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 015641 222 LMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFN 280 (403)
Q Consensus 222 ll~fY~~m~i~Y~vl~~~W~~~~~k~rkdll~Iq~~I~avi~l~~le~~~~~~~y~~~N 280 (403)
.+|+--...++-....+.|.....+++++-.....++...++++.+=....+.+|.+..
T Consensus 131 ~l~l~nT~iLl~Ss~~~~~a~~~~~~~~~~~~~~~~L~~t~~lg~~F~~~q~~Ey~~~~ 189 (265)
T d1m56c_ 131 HLPLINTLILLCSGCAATWAHHALVHENNRRDVAWGLALAIALGALFTVFQAYEYSHAA 189 (265)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred hhHHHHHHHHHccHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45566666666667777787776654444444555555566666655566677776543
No 3
>d1kxga_ b.22.1.1 (A:) Soluble part of TALL-1, sTALL-1 (BAFF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.13 E-value=1e+02 Score=23.97 Aligned_cols=36 Identities=14% Similarity=0.286 Sum_probs=23.5
Q ss_pred ceeEEeCCCceEEEEEEEeCCCCCceEEEEEEEEECCC
Q 015641 175 SEEVEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPD 212 (403)
Q Consensus 175 ~~~y~I~~tG~Y~v~~~~C~~~~~~~~~~g~v~f~Npy 212 (403)
+....|+++|+|.||...+-.+ +.. -.++..+++..
T Consensus 41 ~g~L~V~~~GlYfVYsQV~F~~-~~~-~lsh~v~~~~~ 76 (144)
T d1kxga_ 41 ENKILVKETGYFFIYGQVLYTD-KTY-AMGHLIQRKKV 76 (144)
T ss_dssp TTEEEECSCEEEEEEEEEEECC-CSS-EEEEEEEEECS
T ss_pred CCEEEEccceEEEEEEEEEEeC-CCc-ccceEEEEEec
Confidence 5578999999999998766432 122 23455666543
No 4
>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.28 E-value=1.2e+02 Score=21.86 Aligned_cols=42 Identities=17% Similarity=0.129 Sum_probs=24.0
Q ss_pred CCCCcEEecCCCCCCCCceeEEeeecCCccccccceeEEe--CCCceEEEE
Q 015641 141 CSVGEVIIHVDPENHEWPRRIKAFFQGTNEETQISEEVEI--ERTGMYYLY 189 (403)
Q Consensus 141 C~~g~fIi~~~~~~~~~~~~~~~~f~~~~~~~~l~~~y~I--~~tG~Y~v~ 189 (403)
..+|.|+++++.+++.. ..+.+.+.+. ..+|.| .++|.|++.
T Consensus 23 ~~~G~FLVR~S~~~~g~-~~LSv~~~~~------v~H~~I~~~~~g~~~~~ 66 (103)
T d1i3za_ 23 GVDGNFLIRDSESVPGA-LCLCVSFKKL------VYSYRIFREKHGYYRIE 66 (103)
T ss_dssp CSTTEEEEEECSSSTTC-EEEEEECSSS------EEEEEEEECTTSCEEEC
T ss_pred CCCCeEEEEecCCCCCC-EEEEEEeCCe------EEEEEeEEcCCCcEEEe
Confidence 35799999988766642 2333332221 234445 457777753
No 5
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}
Probab=14.93 E-value=11 Score=27.38 Aligned_cols=14 Identities=36% Similarity=0.451 Sum_probs=11.1
Q ss_pred HhhcceecccCCCC
Q 015641 390 QVMFCVMLSFHPDR 403 (403)
Q Consensus 390 ~~rrq~~~~~~~~~ 403 (403)
+..|+.++.+||||
T Consensus 32 kaYr~l~~~~HPDk 45 (79)
T d1fafa_ 32 QAYKQQSLLLHPDK 45 (79)
T ss_dssp HHHHHHHHHSSGGG
T ss_pred HHHHHHHHHhCccc
Confidence 45678888999986
No 6
>d1dg6a_ b.22.1.1 (A:) Apoptosis-2 ligand, apo2l/TRAIL {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.18 E-value=1.4e+02 Score=23.38 Aligned_cols=19 Identities=32% Similarity=0.644 Sum_probs=15.3
Q ss_pred ceeEEeCCCceEEEEEEEe
Q 015641 175 SEEVEIERTGMYYLYFMYC 193 (403)
Q Consensus 175 ~~~y~I~~tG~Y~v~~~~C 193 (403)
+.+..|+++|+|.||...+
T Consensus 52 ~G~L~V~~~G~YfVYsQV~ 70 (162)
T d1dg6a_ 52 NGELVIHEKGFYYIYSQTY 70 (162)
T ss_dssp TTEEEESSCEEEEEEEEEE
T ss_pred CCEEEeCCCeEEEEEEEEE
Confidence 4568999999999997553
No 7
>d1v54c_ f.25.1.1 (C:) Mitochondrial cytochrome c oxidase, subunit III {Cow (Bos taurus) [TaxId: 9913]}
Probab=13.80 E-value=3.4e+02 Score=22.75 Aligned_cols=61 Identities=16% Similarity=0.041 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 015641 223 MTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGS 284 (403)
Q Consensus 223 l~fY~~m~i~Y~vl~~~W~~~~~k~rkdll~Iq~~I~avi~l~~le~~~~~~~y~~~N~~G~ 284 (403)
+|+...+.++-..+.+.|.....|.+ +--+.-.++.+.++++.+-..+++.+|...+.+..
T Consensus 127 lpllnT~vLl~Ss~t~~~A~~~~~~~-~~~~~~~~l~~t~~lg~~Fl~~q~~Ey~~~~~~~~ 187 (259)
T d1v54c_ 127 VPLLNTSVLLASGVSITWAHHSLMEG-DRKHMLQALFITITLGVYFTLLQASEYYEAPFTIS 187 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 45556666666666777777766643 33445556667778888888888888876554443
No 8
>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.61 E-value=1.3e+02 Score=22.97 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=24.0
Q ss_pred CCCCCCcEEecCCCCCCCCceeEEeeecCCccccccceeEEe--CCCceEEE
Q 015641 139 GSCSVGEVIIHVDPENHEWPRRIKAFFQGTNEETQISEEVEI--ERTGMYYL 188 (403)
Q Consensus 139 g~C~~g~fIi~~~~~~~~~~~~~~~~f~~~~~~~~l~~~y~I--~~tG~Y~v 188 (403)
..|.+|.|+++++.+.+. ...+.+.+.+ . ..+|.| ..+|.|++
T Consensus 24 ~g~~dG~FLVR~S~~~~g-~y~LSv~~~~--~----v~H~~I~~~~~g~~~i 68 (129)
T d1a81a1 24 GGMSDGLYLLRQSRNYLG-GFALSVAHGR--K----AHHYTIERELNGTYAI 68 (129)
T ss_dssp TTCCTTEEEEEECSSSTT-CEEEEEEETT--E----EEEEEEEECTTSCEEE
T ss_pred cCCCCccEEEEccCCCCc-ceEEEeeecc--c----ceEEEEEEcCCCCeee
Confidence 457889999998766554 2233333322 1 233444 44677765
No 9
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=13.30 E-value=13 Score=26.28 Aligned_cols=13 Identities=23% Similarity=0.480 Sum_probs=10.0
Q ss_pred hhcceecccCCCC
Q 015641 391 VMFCVMLSFHPDR 403 (403)
Q Consensus 391 ~rrq~~~~~~~~~ 403 (403)
..|+..+.+||||
T Consensus 23 aYr~l~~~~HPDk 35 (76)
T d1fpoa1 23 RFQDLQRQYHPDK 35 (76)
T ss_dssp HHHHHHHHTCGGG
T ss_pred HHHHHHHHhCccc
Confidence 4577788899986
No 10
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=13.21 E-value=20 Score=26.40 Aligned_cols=14 Identities=36% Similarity=0.660 Sum_probs=10.4
Q ss_pred HhhcceecccCCCC
Q 015641 390 QVMFCVMLSFHPDR 403 (403)
Q Consensus 390 ~~rrq~~~~~~~~~ 403 (403)
+.-|.+++.+||||
T Consensus 35 ~aY~~l~~~~HPDk 48 (94)
T d1wjza_ 35 QKYQKLILLYHPDK 48 (94)
T ss_dssp HHHHHTTSSSCSTT
T ss_pred HHHHHHHHHhhhhh
Confidence 34577788889986
Done!