Your job contains 1 sequence.
>015643
MMTGEKRTANAMGGKTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERV
RLETASSCNNNNKLINEHTDKDTVPVWHQGFTRKARTPRHNNNKAMLMQQAKANEPLVPE
IGCEDGSLQADDQVIDEQLLYQVPVFDPFEAVEPDENLIVDGYNGQDGTGDLDDLHGFLP
SDLDLAEFAADVESLLGGGGGALDEDSCDVKEFWTLLDCKEEETIALNLKIKDEEVEEAV
IAEATREAIGCNFDYQSPVTGDDTAGLMSTECKPKLMRNVSLKLNYDAVITAWASQGCPW
TAGSRPEINLNHCWPYCTGLCCKGVHHHTCGGGAVLRGCHLGAGGGREARVSRYREKRRT
RLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSFMGSANDALQYH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015643
(403 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2201277 - symbol:BBX14 "B-box domain protein 1... 671 5.8e-66 1
TAIR|locus:2031581 - symbol:BBX16 "B-box domain protein 1... 390 1.6e-65 2
TAIR|locus:2031180 - symbol:BBX15 "B-box domain protein 1... 501 6.0e-48 1
TAIR|locus:2028421 - symbol:BBX17 "B-box domain protein 1... 261 2.5e-45 3
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 155 1.7e-20 3
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 155 3.6e-20 2
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 158 4.7e-20 2
UNIPROTKB|Q9FDX8 - symbol:HD1 "Zinc finger protein HD1" s... 152 1.7e-19 2
UNIPROTKB|Q9FE92 - symbol:Hd1 "Heading day 1" species:453... 152 1.9e-19 2
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 151 5.5e-19 2
TAIR|locus:2172545 - symbol:COL5 "CONSTANS-like 5" specie... 158 3.9e-18 2
TAIR|locus:2007482 - symbol:AT1G07050 "AT1G07050" species... 181 1.7e-16 2
TAIR|locus:2145698 - symbol:AT5G14370 species:3702 "Arabi... 182 1.2e-14 3
TAIR|locus:2175564 - symbol:CIA2 "chloroplast import appa... 194 3.4e-14 2
TAIR|locus:2120850 - symbol:CIL "AT4G25990" species:3702 ... 162 3.9e-14 3
TAIR|locus:2043288 - symbol:AT2G47890 species:3702 "Arabi... 127 7.0e-14 2
TAIR|locus:2051104 - symbol:BBX12 "B-box domain protein 1... 129 2.4e-12 2
TAIR|locus:2129860 - symbol:BBX9 "B-box domain protein 9"... 118 3.9e-12 3
TAIR|locus:2091082 - symbol:COL9 "CONSTANS-like 9" specie... 119 6.1e-12 2
TAIR|locus:2164718 - symbol:BBX8 "B-box domain protein 8"... 116 2.0e-11 3
TAIR|locus:2010504 - symbol:BBX13 "B-box domain protein 1... 116 5.7e-11 2
TAIR|locus:2088748 - symbol:BBX10 "B-box domain protein 1... 109 4.2e-10 2
UNIPROTKB|Q9FRZ6 - symbol:Q9FRZ6 "Hd1" species:4530 "Oryz... 151 2.1e-08 1
UNIPROTKB|Q9FRZ7 - symbol:Hd1 "Hd1 protein" species:39946... 151 5.3e-08 1
TAIR|locus:2147274 - symbol:BBX29 "B-box domain protein 2... 138 2.7e-07 1
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 123 4.1e-07 2
TAIR|locus:2005624 - symbol:BBX21 "B-box domain protein 2... 140 8.7e-07 1
TAIR|locus:2199262 - symbol:BBX27 "B-box domain protein 2... 132 2.2e-06 2
TAIR|locus:2050130 - symbol:BBX18 "B-box domain protein 1... 122 3.4e-06 1
TAIR|locus:2151206 - symbol:PRR7 "pseudo-response regulat... 139 4.2e-06 1
TAIR|locus:2062749 - symbol:AT2G46670 "AT2G46670" species... 123 7.0e-06 1
TAIR|locus:2061330 - symbol:STH "salt tolerance homologue... 126 1.4e-05 1
TAIR|locus:1009023318 - symbol:BBX30 "B-box domain protei... 108 1.9e-05 1
TAIR|locus:2198841 - symbol:STO "SALT TOLERANCE" species:... 124 2.7e-05 1
TAIR|locus:2207155 - symbol:AT1G05290 species:3702 "Arabi... 113 2.7e-05 3
TAIR|locus:2095562 - symbol:BBX31 "B-box domain protein 3... 106 3.1e-05 1
TAIR|locus:2122759 - symbol:bbx23 "B-box domain protein 2... 113 4.2e-05 1
TAIR|locus:2018344 - symbol:AT1G04500 "AT1G04500" species... 124 7.3e-05 1
TAIR|locus:2051099 - symbol:AT2G33350 "AT2G33350" species... 122 9.8e-05 2
TAIR|locus:2178441 - symbol:AT5G53420 "AT5G53420" species... 106 0.00020 2
TAIR|locus:2132902 - symbol:AT4G27900 "AT4G27900" species... 109 0.00022 2
TAIR|locus:2168083 - symbol:AT5G59990 "AT5G59990" species... 114 0.00036 1
TAIR|locus:2120207 - symbol:BZS1 "BZS1" species:3702 "Ara... 112 0.00061 1
TAIR|locus:2163198 - symbol:TOC1 "TIMING OF CAB EXPRESSIO... 117 0.00090 1
>TAIR|locus:2201277 [details] [associations]
symbol:BBX14 "B-box domain protein 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 HOGENOM:HOG000240360 ProtClustDB:CLSN2689085
EMBL:AC011915 EMBL:AY054625 EMBL:AY081541 EMBL:AY084427
IPI:IPI00518479 PIR:D96709 RefSeq:NP_564932.1 UniGene:At.23999
UniGene:At.69467 UniGene:At.74856 IntAct:Q8LG76 STRING:Q8LG76
PRIDE:Q8LG76 EnsemblPlants:AT1G68520.1 GeneID:843181
KEGG:ath:AT1G68520 TAIR:At1g68520 eggNOG:NOG257442
InParanoid:Q8LG76 OMA:AFLCHAC PhylomeDB:Q8LG76
Genevestigator:Q8LG76 GermOnline:AT1G68520 Uniprot:Q8LG76
Length = 406
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 179/422 (42%), Positives = 232/422 (54%)
Query: 6 KRTANAMGGKTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETA 65
K A+A+GGKTARACD C+++RARWYC ADDAFLC CD SVHSAN LA RHERVRL++A
Sbjct: 3 KSLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSA 62
Query: 66 SSCNNNNKLINEHTDKDTVPVWHQGFTRKARTPRHNNNKAMLMQQAKANEPLVPEIGCED 125
S+ K H WHQGFTRKARTPR K+ M LVPE+ ED
Sbjct: 63 SA----GKY--RHASPPHQATWHQGFTRKARTPR-GGKKSHTM----VFHDLVPEMSTED 111
Query: 126 GSLQADDQVIDEQLLYQVPVFDPF-------EAVEPDENLIVDGYNGQDGTGDLDD---- 174
QA+ ++EQL+++VPV + +++E + + + + DD
Sbjct: 112 ---QAESYEVEEQLIFEVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDNAES 168
Query: 175 -LHGFLPSDLDLAEFAADVESXXXXXXXALDE-DSCDVKEFWTLL--DCKEEETIALNLK 230
L+G P+D++LA+F ADVE+ + + E + + +EE + +
Sbjct: 169 CLNGLFPTDMELAQFTADVETLLGGGDREFHSIEELGLGEMLKIEKEEVEEEGVVTREVH 228
Query: 231 IKDXXXXXX--XXXXXXXXXXGCNFDYQSPVTGDDTA------GL--MSTECKP-KLMRN 279
+D FD +D G+ MS K K +
Sbjct: 229 DQDEGDETSPFEISFDYEYTHKTTFDEGEEDEKEDVMKNVMEMGVNEMSGGIKEEKKEKA 288
Query: 280 VSLKLNYDAVITAWASQGCPWTAGSRPEINLNH-CWPYCT-GLCCKGVHHHTCGGGAVLR 337
+ L+L+Y++VI+ W QG PWTA EI+L+ C+P T G HHH G
Sbjct: 289 LMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGL--- 345
Query: 338 GCHLG-AG-GGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSFMGS 395
G HLG AG GGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR+S +G
Sbjct: 346 GLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSS-IGV 404
Query: 396 AN 397
A+
Sbjct: 405 AH 406
>TAIR|locus:2031581 [details] [associations]
symbol:BBX16 "B-box domain protein 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009641 "shade avoidance" evidence=IMP] [GO:0010223 "secondary
shoot formation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016662 HOGENOM:HOG000240360 EMBL:BT015740
EMBL:BT020183 IPI:IPI00516267 PIR:C96766 RefSeq:NP_177528.1
UniGene:At.34943 IntAct:Q9C9A9 STRING:Q9C9A9
EnsemblPlants:AT1G73870.1 GeneID:843723 KEGG:ath:AT1G73870
TAIR:At1g73870 eggNOG:NOG320376 InParanoid:Q9C9A9 OMA:EAKCENG
PhylomeDB:Q9C9A9 ProtClustDB:CLSN2914358 Genevestigator:Q9C9A9
GermOnline:AT1G73870 Uniprot:Q9C9A9
Length = 392
Score = 390 (142.3 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 104/249 (41%), Positives = 132/249 (53%)
Query: 5 EKRTANAMGGK-TARACDGCL-RKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRL 62
E RTA+ G K AR CD C+ R RA WYC ADDAFLCQ CDAS+HSAN LA RHERVRL
Sbjct: 6 ESRTASVTGEKMAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65
Query: 63 ETASSCNNNNKLINEHTDKDTVPVWHQGFTRKARTPRHNNNKAMLMQQAKANEPLVPEIG 122
+++S E DK T VW++GF RKARTPR + + Q ++N+PLVPE+G
Sbjct: 66 QSSSP--------TETADK-TTSVWYEGFRRKARTPRSKSCAFEKLLQIESNDPLVPELG 116
Query: 123 CE--DGSLQADD-QVIDEQLLYQVPVFDPFE----------AVEPDE--NLIVDGYNGQD 167
+ DG + +E L VPVFDPF + PDE N +G G+
Sbjct: 117 GDEDDGFFSFSSVEETEESLNCCVPVFDPFSDMLIDDINGFCLVPDEVNNTTTNGELGEV 176
Query: 168 GTGDLDD--LHGFLPSDLDLAEFAADVESXXXXXXXALDEDSC-DVKEFWTLLDCKEEET 224
+DD GF+P D+DL + DVES +E C KE + KEE
Sbjct: 177 EKAIMDDEGFMGFVPLDMDLEDLTMDVESLLE------EEQLCLGFKEPNDVGVIKEENK 230
Query: 225 IALNLKIKD 233
+ + KD
Sbjct: 231 VGFEINCKD 239
Score = 295 (108.9 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 66/117 (56%), Positives = 77/117 (65%)
Query: 282 LKLNYDAVITAWASQGCPWTAGSRPEINL--NHCWPYCTGLCCKGVHHHTCGGGAVLRGC 339
L+L+Y AVI+AW + G PW G +PE L N C P+ G G G+V R
Sbjct: 279 LRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVG----GYEKLMSSDGSVTRQQ 334
Query: 340 HLGAGGG---REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSFM 393
GG REARV RY+EKRRTRLFSKKIRYEVRKLNAE+RPR+KGRFVKRTS +
Sbjct: 335 GRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTSLL 391
>TAIR|locus:2031180 [details] [associations]
symbol:BBX15 "B-box domain protein 15" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281 GO:GO:0016020
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AY093174
IPI:IPI00533844 PIR:E86384 RefSeq:NP_173915.2 UniGene:At.27494
EnsemblPlants:AT1G25440.1 GeneID:839130 KEGG:ath:AT1G25440
TAIR:At1g25440 eggNOG:NOG293508 HOGENOM:HOG000240360
InParanoid:Q8RWD0 OMA:SDEISHE PhylomeDB:Q8RWD0
ProtClustDB:CLSN2689085 Genevestigator:Q8RWD0 Uniprot:Q8RWD0
Length = 417
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 129/333 (38%), Positives = 183/333 (54%)
Query: 6 KRTANAMGGKTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETA 65
K ANA+G KTARACD C+++RARWYC ADDAFLCQ CD+ VHSAN LA RHERVRL+TA
Sbjct: 3 KSLANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTA 62
Query: 66 SSCNNNNKLINEHTDKDTVPVWHQGFTRKARTPRHNNNKAMLMQQAKANEPLVPEIGCED 125
S + + + V WH GFTRKARTPR + K + LVP+I ED
Sbjct: 63 SPAVVKHSNHSSASPPHEVATWHHGFTRKARTPRGSGKK----NNSSIFHDLVPDISIED 118
Query: 126 GSLQADDQVIDEQLLYQVPVFDPF-------EAVEP--DENLIVDGYNGQDGTGDLDD-L 175
Q D+ ++EQL+ QVPV DP + VEP + +I G ++ + + L
Sbjct: 119 ---QTDNYELEEQLICQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEEDNAESCL 175
Query: 176 HGFLPSDLDLAEFAADVESXXX----XXXXALDEDSCDVKEFWTL----LDCKEEETIAL 227
+GF P+D++L EFAADVE+ A++E E + + ++ + EE A+
Sbjct: 176 NGFFPTDMELEEFAADVETLLGRGLDTESYAMEELGLSNSEMFKIEKDEIEEEVEEIKAM 235
Query: 228 NLKIKDXXXXXXXXXXXXXXXXGCNFDYQSP-VTGDDTA--GLMST-ECKPKLM----RN 279
++ I D +FDY+S T ++ + S+ EC K+ +N
Sbjct: 236 SMDIFDDDRKDVDGTVPFEL----SFDYESSHKTSEEEVMKNVESSGECVVKVKEEEHKN 291
Query: 280 V-SLKLNYDAVITAWASQGCPWTAGSRPEINLN 311
V L+LNYD+VI+ W QG PW++G PE +++
Sbjct: 292 VLMLRLNYDSVISTWGGQGPPWSSGEPPERDMD 324
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 102/243 (41%), Positives = 137/243 (56%)
Query: 175 LHGFLPSDLDLAEFAADVESXXX----XXXXALDEDSCDVKEFWTL----LDCKEEETIA 226
L+GF P+D++L EFAADVE+ A++E E + + ++ + EE A
Sbjct: 175 LNGFFPTDMELEEFAADVETLLGRGLDTESYAMEELGLSNSEMFKIEKDEIEEEVEEIKA 234
Query: 227 LNLKIKDXXXXXXXXXXXXXXXXGCNFDYQSP-VTGDDTA--GLMST-ECKPKLM----R 278
+++ I D +FDY+S T ++ + S+ EC K+ +
Sbjct: 235 MSMDIFDDDRKDVDGTVPFEL----SFDYESSHKTSEEEVMKNVESSGECVVKVKEEEHK 290
Query: 279 NV-SLKLNYDAVITAWASQGCPWTAGSRPEINLNHC-WPYCTGLCCKG--VHHHTCGGGA 334
NV L+LNYD+VI+ W QG PW++G PE +++ WP + + G H GG
Sbjct: 291 NVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGC 350
Query: 335 VLRGCHLGAGGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSFMG 394
L G GGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR S
Sbjct: 351 -LPSSGFG-DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASLAA 408
Query: 395 SAN 397
+A+
Sbjct: 409 AAS 411
>TAIR|locus:2028421 [details] [associations]
symbol:BBX17 "B-box domain protein 17" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 IPI:IPI00544498
RefSeq:NP_175339.2 UniGene:At.38297 EnsemblPlants:AT1G49130.1
GeneID:841336 KEGG:ath:AT1G49130 OMA:VATKHER Uniprot:F4I1N0
Length = 326
Score = 261 (96.9 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 63/159 (39%), Positives = 85/159 (53%)
Query: 15 KTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCNNNNKL 74
K RAC+ CL K A WYC +DDAFLC CD SVHSAN +A++HERV L T N++
Sbjct: 23 KQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRT-------NEI 75
Query: 75 INEHTDKDTVP-VWHQGFTRKARTPRHNNNKA---MLMQQAKANEPLVPEIGCEDGSLQA 130
N+ T+ VWH GF RKARTPR K + + + +P VPEIG E +
Sbjct: 76 SNDVRGGTTLTSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIGGE--VMFF 133
Query: 131 DDQVIDEQLLYQVPVFDPFEAVEPDENLIVDGYNGQDGT 169
+ D+ + VP F+ F + + +NG + T
Sbjct: 134 IPEANDDDMTSLVPEFEGFTEM----GFFLSNHNGTEET 168
Score = 185 (70.2 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 35/44 (79%), Positives = 41/44 (93%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 390
REARV RYR+KR+ RLF KKIRYEVRK+NA+KRPRMKGRFV+R+
Sbjct: 278 REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 321
Score = 58 (25.5 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 251 CNFDYQSPVTGDDTAGLMSTECKPKLMRNVSLKLNYDAVITAWASQGCP 299
C DY + +T + + E + N +LNY+ VI AW Q P
Sbjct: 208 CKKDYDNVITVSEK----TEEIEDCYENNARHRLNYENVIAAWDKQESP 252
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 155 (59.6 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 6 KRTANAMG-GKT--ARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRL 62
K+ +N +G G+ AR CD C YC AD A+LC CDA VHSAN++ASRH+RVR+
Sbjct: 3 KQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV 62
Query: 63 ETASSC 68
SC
Sbjct: 63 --CESC 66
Score = 146 (56.5 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 29/70 (41%), Positives = 39/70 (55%)
Query: 15 KTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCNNNNKL 74
K R C+ C R A + C ADDA LC CD+ VHSAN LA RH+RV + S + ++
Sbjct: 58 KRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMT 117
Query: 75 INEHTDKDTV 84
H + T+
Sbjct: 118 TTHHQSEKTM 127
Score = 144 (55.7 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 30/43 (69%), Positives = 32/43 (74%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 389
REARV RYREKR+TR F K IRY RK AE RPR+ GRF KR
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
Score = 48 (22.0 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 153 EPDENLIVDGYNGQDGTGDLDDLHGFL 179
+P++ L+VD G++G D ++ +L
Sbjct: 129 DPEKRLVVDQEEGEEGDKDAKEVASWL 155
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 155 (59.6 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 30/52 (57%), Positives = 35/52 (67%)
Query: 17 ARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSC 68
A+ACD C YC AD A+LC CDA VH+AN+LASRHERVR+ SC
Sbjct: 9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV--CQSC 58
Score = 152 (58.6 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 32/53 (60%), Positives = 36/53 (67%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSFMGSANDA 399
REARV RYREK++ R F K IRY RK AEKRPR+KGRF K+ AN A
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQA 338
Score = 135 (52.6 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 9 ANAMGGK--TARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETAS 66
AN + + R C C R A ++C AD A LC CD+ +HSAN LA RH+RV + S
Sbjct: 42 ANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPIS 101
Query: 67 SCNNNNKLINEHTDKDTV 84
+ ++ N H+ + TV
Sbjct: 102 EYSYSSTATN-HSCETTV 118
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 158 (60.7 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 33/65 (50%), Positives = 40/65 (61%)
Query: 6 KRTANAMGGKTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETA 65
K +N G ARACD C YC AD A+LC CDA VH+AN++ASRHERVR+
Sbjct: 3 KEESNE-SGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV--C 59
Query: 66 SSCNN 70
SC +
Sbjct: 60 QSCES 64
Score = 147 (56.8 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 31/52 (59%), Positives = 35/52 (67%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSFMGSAND 398
REARV RYREK++TR F K IRY RK AE RPR+KGRF KR A +
Sbjct: 278 REARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEE 329
Score = 133 (51.9 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 28/65 (43%), Positives = 36/65 (55%)
Query: 18 RACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCNNNNKLINE 77
R C C A + C AD A LC CDA +HSAN LA RH+RV + S+ N+ + +
Sbjct: 57 RVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSA-NSCSSMAPS 115
Query: 78 HTDKD 82
TD D
Sbjct: 116 ETDAD 120
>UNIPROTKB|Q9FDX8 [details] [associations]
symbol:HD1 "Zinc finger protein HD1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0045892 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:AP008212 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009908 GO:GO:0009909 GO:GO:0010229
eggNOG:NOG281690 OMA:RVCEACE GO:GO:0048579 GO:GO:0048576
EMBL:AB041837 EMBL:AB041838 EMBL:AB375859 EMBL:AP003044
EMBL:AP005813 RefSeq:NP_001057378.1 UniGene:Os.1189 STRING:Q9FDX8
EnsemblPlants:LOC_Os06g16370.1 GeneID:4340746 KEGG:osa:4340746
Gramene:Q9FDX8 ProtClustDB:CLSN2696123 GO:GO:0048571 GO:GO:0048572
Uniprot:Q9FDX8
Length = 395
Score = 152 (58.6 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 30/44 (68%), Positives = 34/44 (77%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 390
REARV RYREK++ R F K IRYE RK AE RPR+KGRF KR+
Sbjct: 326 REARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRS 369
Score = 151 (58.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 17 ARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRL 62
AR CDGC + YC AD A+LC CDA VH+AN++ASRHERVR+
Sbjct: 32 ARPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV 77
Score = 94 (38.1 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 19/36 (52%), Positives = 20/36 (55%)
Query: 18 RACDGCLRKRARWYCVADDAFLCQGCDASVHSANQL 53
R C+ C R A C AD A LC CD VHSAN L
Sbjct: 76 RVCEACERAPAALACRADAAALCVACDVQVHSANPL 111
Score = 41 (19.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 44 DASVHSANQLASRHERVR----LETASSCNNNNKLINEHTDKD 82
+A V +A L + E V L S NNNN N++ + D
Sbjct: 124 EAVVATATVLGDKDEEVDSWLLLSKDSDNNNNNNNNNDNDNND 166
>UNIPROTKB|Q9FE92 [details] [associations]
symbol:Hd1 "Heading day 1" species:4530 "Oryza sativa"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009909 GO:GO:0010229 GO:GO:0048571 GO:GO:0048572
EMBL:JN402207 EMBL:AB041840 EMBL:AB041842 Gramene:Q9FE92
Genevestigator:Q9FE92 Uniprot:Q9FE92
Length = 407
Score = 152 (58.6 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 30/44 (68%), Positives = 34/44 (77%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 390
REARV RYREK++ R F K IRYE RK AE RPR+KGRF KR+
Sbjct: 338 REARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRS 381
Score = 151 (58.2 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 17 ARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRL 62
AR CDGC + YC AD A+LC CDA VH+AN++ASRHERVR+
Sbjct: 32 ARPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV 77
Score = 115 (45.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 23/43 (53%), Positives = 26/43 (60%)
Query: 18 RACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERV 60
R C+ C R A C AD A LC CD V+SAN LA RH+RV
Sbjct: 76 RVCEACERAPAALACRADAAALCVACDVQVYSANPLARRHQRV 118
Score = 41 (19.5 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 44 DASVHSANQLASRHERVR----LETASSCNNNNKLINEHTDKD 82
+A V +A L + E V L S NNNN N++ + D
Sbjct: 136 EAVVATATVLGDKDEEVDSWLLLSKDSDNNNNNNNNNDNDNND 178
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 151 (58.2 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 31/44 (70%), Positives = 33/44 (75%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 390
REARV RYREKR+ R F K IRY RK AE RPR+KGRF KRT
Sbjct: 229 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 272
Score = 141 (54.7 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 16 TARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRL 62
++R CD C A +C AD AFLC CD +H+AN+LASRHERV L
Sbjct: 4 SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL 50
Score = 119 (46.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 4 GEKRTANAMGGKTARA--CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERV 60
G+ TAN + + R C+ C + A C AD A LC CD +HSAN L+ RHERV
Sbjct: 33 GKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>TAIR|locus:2172545 [details] [associations]
symbol:COL5 "CONSTANS-like 5" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB018118 HOGENOM:HOG000238833 EMBL:AY057632
EMBL:AY080747 EMBL:AY114006 EMBL:AY088432 IPI:IPI00531436
RefSeq:NP_568863.1 UniGene:At.20797 IntAct:Q9FHH8 STRING:Q9FHH8
PRIDE:Q9FHH8 EnsemblPlants:AT5G57660.1 GeneID:835872
KEGG:ath:AT5G57660 TAIR:At5g57660 eggNOG:NOG321782
InParanoid:Q9FHH8 OMA:YSSYTAT PhylomeDB:Q9FHH8
ProtClustDB:CLSN2917767 Genevestigator:Q9FHH8 GermOnline:AT5G57660
Uniprot:Q9FHH8
Length = 355
Score = 158 (60.7 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 33/53 (62%), Positives = 36/53 (67%)
Query: 338 GCHLGAGGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 390
G H + REARV RYREKR+ R F K IRY RK AE RPR+KGRF KRT
Sbjct: 276 GDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRT 328
Score = 129 (50.5 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 26/45 (57%), Positives = 30/45 (66%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLET 64
C+ C + A C AD A LC CDA +HSAN LASRHERV +ET
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVET 105
Score = 108 (43.1 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 14 GKTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERV 60
G AR+CD C A +C D AFLC CD +HS +RHERV
Sbjct: 16 GAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERV 58
>TAIR|locus:2007482 [details] [associations]
symbol:AT1G07050 "AT1G07050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AY085907 EMBL:AK176556 EMBL:AB493438
IPI:IPI00532995 RefSeq:NP_563778.1 UniGene:At.42316 STRING:Q8LDM8
EnsemblPlants:AT1G07050.1 GeneID:837216 KEGG:ath:AT1G07050
TAIR:At1g07050 eggNOG:NOG283732 HOGENOM:HOG000090331
InParanoid:Q8LDM8 OMA:NMRREAS PhylomeDB:Q8LDM8
ProtClustDB:CLSN2687713 ArrayExpress:Q8LDM8 Genevestigator:Q8LDM8
Uniprot:Q8LDM8
Length = 195
Score = 181 (68.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 389
REA V RY+EKR++RLFSKKIRY+VRKLNA+KRPR KGRFVKR
Sbjct: 151 REASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
Score = 48 (22.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 280 VSLKLNYDAVITAWASQGCP-WT 301
+ L LN+ VI AW+ P WT
Sbjct: 104 LKLNLNHQEVIDAWSDHQKPLWT 126
>TAIR|locus:2145698 [details] [associations]
symbol:AT5G14370 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002688 EMBL:AY050892 EMBL:AY091296
IPI:IPI00522642 RefSeq:NP_568300.1 UniGene:At.5173
EnsemblPlants:AT5G14370.1 GeneID:831288 KEGG:ath:AT5G14370
TAIR:At5g14370 HOGENOM:HOG000151170 InParanoid:Q949T9 OMA:WVSYSEV
PhylomeDB:Q949T9 ProtClustDB:CLSN2689669 ArrayExpress:Q949T9
Genevestigator:Q949T9 Uniprot:Q949T9
Length = 339
Score = 182 (69.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 35/45 (77%), Positives = 41/45 (91%)
Query: 345 GGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 389
G REA + RY+EKR+ RLFSK+IRY+VRKLNAEKRPR+KGRFVKR
Sbjct: 292 GHREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
Score = 60 (26.2 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 279 NVSLKLNYDAVITAWASQGCPWTAGSRPE 307
+++LKL+Y+ ++ AW+ +G + G P+
Sbjct: 228 SLALKLDYEQIMEAWSDKGTLYVDGEPPQ 256
Score = 38 (18.4 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 66 SSCNNNNKLINEHTDKDTVP 85
S NNNK ++ + DT P
Sbjct: 80 SKKKNNNKKQSKKKEPDTTP 99
>TAIR|locus:2175564 [details] [associations]
symbol:CIA2 "chloroplast import apparatus 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEP] [GO:0045036 "protein targeting to chloroplast"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR010402
Pfam:PF06203 PROSITE:PS51017 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 EMBL:AB023042 EMBL:AF359387
EMBL:AF372929 EMBL:AY078036 EMBL:AK316813 EMBL:AK221521
IPI:IPI00517190 IPI:IPI00544089 IPI:IPI00656805
RefSeq:NP_001032087.1 RefSeq:NP_568852.2 RefSeq:NP_851201.1
UniGene:At.9681 IntAct:Q9LU68 STRING:Q9LU68 PaxDb:Q9LU68
PRIDE:Q9LU68 EnsemblPlants:AT5G57180.2 GeneID:835824
KEGG:ath:AT5G57180 GeneFarm:2245 TAIR:At5g57180 eggNOG:NOG245310
HOGENOM:HOG000238782 InParanoid:Q9LU68 OMA:YLRSLMV PhylomeDB:Q9LU68
ProtClustDB:CLSN2680548 Genevestigator:Q9LU68 GO:GO:0045036
Uniprot:Q9LU68
Length = 435
Score = 194 (73.4 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 38/48 (79%), Positives = 43/48 (89%)
Query: 342 GAGGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 389
G G REA V RY+EKRRTRLFSKKIRY+VRKLNA++RPRMKGRFV+R
Sbjct: 378 GDSGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425
Score = 54 (24.1 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 282 LKLNYDAVITAWASQGCPW 300
LKL+YD V+ AW+ + P+
Sbjct: 337 LKLDYDGVLEAWSDKTSPF 355
>TAIR|locus:2120850 [details] [associations]
symbol:CIL "AT4G25990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002687 HOGENOM:HOG000238782
ProtClustDB:CLSN2680548 EMBL:AB493701 IPI:IPI00538830
RefSeq:NP_849445.1 UniGene:At.2953 EnsemblPlants:AT4G25990.2
GeneID:828705 KEGG:ath:AT4G25990 TAIR:At4g25990 eggNOG:NOG266168
OMA:ISTRRPR PhylomeDB:C0SVJ8 ArrayExpress:C0SVJ8
Genevestigator:C0SVJ8 Uniprot:C0SVJ8
Length = 409
Score = 162 (62.1 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 342 GAGGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 383
G G REA V RY+EKRR RLFSKKIRY+VRKLNA++RPRMK
Sbjct: 336 GESGMREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMK 377
Score = 73 (30.8 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 270 TECKPKLMRNVS--LKLNYDAVITAWASQGCPWT 301
T+ PKL + VS LKL+YD V+ AW+ + P++
Sbjct: 279 TDSNPKLEQRVSPLLKLDYDGVLEAWSGKESPFS 312
Score = 51 (23.0 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 92 TRKARTPRHNNNKAMLMQQAKANEPLVPEIGCEDGSLQADDQVID--EQLLYQVPV-FDP 148
++KA+T NK+ L +A++ L+P + E+ + + E L Q V FD
Sbjct: 71 SKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLFNPTIPTKTEHFLEQKEVSFDD 130
Query: 149 FE 150
E
Sbjct: 131 LE 132
Score = 39 (18.8 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 62 LETASSCNNNNKLINEHTDKDTVPVWHQGFTRKARTPRHNNNK 104
LE S +NN T +T TR+ RTPR N+
Sbjct: 10 LEMMKSPPSNNTPSPSSTISETNSPPFSISTRRPRTPRKRPNQ 52
>TAIR|locus:2043288 [details] [associations]
symbol:AT2G47890 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC005309 EMBL:AC006072 EMBL:BT023413 IPI:IPI00543399
PIR:G84920 RefSeq:NP_182310.1 UniGene:At.12948 STRING:O82256
EnsemblPlants:AT2G47890.1 GeneID:819401 KEGG:ath:AT2G47890
TAIR:At2g47890 eggNOG:NOG271369 HOGENOM:HOG000240051
InParanoid:O82256 OMA:CSRHARA PhylomeDB:O82256
ProtClustDB:CLSN2683730 Genevestigator:O82256 Uniprot:O82256
Length = 332
Score = 127 (49.8 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 48/153 (31%), Positives = 66/153 (43%)
Query: 13 GGKTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCNNNN 72
G + R CD C A YC AD A LC CD VH ANQL ++H R L SCN +
Sbjct: 6 GHQRDRLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL--CDSCNESP 63
Query: 73 KLINEHTDKDTVPVWHQGFTRKARTPRHNNNKAMLMQQAKANEPLVPEIGCEDGSLQADD 132
+ T++ + A + H+ + P VPE+ G DD
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASSSLHSRRPF----EGFTGCPSVPELLAIVG---LDD 116
Query: 133 QVIDEQLLYQVPVFDPFEAVEPDENLIVDGYNG 165
+D LL++ P E V ++ LIV G +G
Sbjct: 117 LTLDSGLLWESP-----EIVSLND-LIVSGGSG 143
Score = 122 (48.0 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
R + +SRY+EK+++R + K IRYE RK+ AE R R++GRF K
Sbjct: 287 RNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
>TAIR|locus:2051104 [details] [associations]
symbol:BBX12 "B-box domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC002332 EMBL:BT002067 EMBL:AY128321
EMBL:BT006572 IPI:IPI00527026 IPI:IPI00539934 PIR:C84746
RefSeq:NP_850211.1 RefSeq:NP_973589.1 UniGene:At.43493
IntAct:O22800 STRING:O22800 EnsemblPlants:AT2G33500.1 GeneID:817915
KEGG:ath:AT2G33500 TAIR:At2g33500 eggNOG:NOG269245
HOGENOM:HOG000243233 InParanoid:O22800 OMA:ATHERSA PhylomeDB:O22800
ProtClustDB:CLSN2713949 Genevestigator:O22800 Uniprot:O22800
Length = 402
Score = 129 (50.5 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 390
R+ + RY+EK++TR + K IRYE RK AE R R+KGRFVK T
Sbjct: 357 RDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKAT 400
Score = 108 (43.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 12 MGGKTAR---ACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSC 68
MG T AC+ C + A +C AD A LC CD VHSAN L+ +H VR + +C
Sbjct: 1 MGTSTTESVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKH--VRSQICDNC 58
Query: 69 NNNNKLINEHTD 80
+ + TD
Sbjct: 59 SKEPVSVRCFTD 70
Score = 105 (42.0 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 8 TANAMGGKTARA--CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETA 65
+AN + K R+ CD C ++ C D+ LCQ CD VH + ++ HER +E
Sbjct: 41 SANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100
Query: 66 SSC 68
S C
Sbjct: 101 SGC 103
>TAIR|locus:2129860 [details] [associations]
symbol:BBX9 "B-box domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006863 "purine
nucleobase transport" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97338 EMBL:AL161541 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 HOGENOM:HOG000116529 IPI:IPI00529586
PIR:F71416 RefSeq:NP_193260.2 UniGene:At.54335
EnsemblPlants:AT4G15250.1 GeneID:827191 KEGG:ath:AT4G15250
TAIR:At4g15250 eggNOG:NOG321931 InParanoid:O23379 OMA:YQDCGIS
PhylomeDB:O23379 ProtClustDB:CLSN2915042 Genevestigator:O23379
GermOnline:AT4G15250 Uniprot:O23379
Length = 330
Score = 118 (46.6 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 27/60 (45%), Positives = 34/60 (56%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRH------ERVRLE-TASSCNNNN 72
CD C ++A YC +D A LC CD +VHSAN L+ RH E+ L+ TA C N N
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNEN 64
Score = 111 (44.1 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
R+ RY++K+ R+F K+IRY RK A+ R R+KGRFVK
Sbjct: 276 RDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVK 317
Score = 64 (27.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 8 TANAMGGKTARA--CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETA 65
+AN + + R+ C+ C + +C+ ++ LCQGC + + L H L
Sbjct: 34 SANPLSQRHTRSLLCEKCSLQPTAVHCMNENVSLCQGCQWTASNCTGLG--HRLQSLNPY 91
Query: 66 SSC 68
S C
Sbjct: 92 SDC 94
Score = 40 (19.1 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 296 QGCPWTAGS 304
QGC WTA +
Sbjct: 69 QGCQWTASN 77
>TAIR|locus:2091082 [details] [associations]
symbol:COL9 "CONSTANS-like 9" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0007623 GO:GO:0008270 GO:GO:0003700
EMBL:AC009176 eggNOG:NOG248444 HOGENOM:HOG000116529
ProtClustDB:CLSN2684850 EMBL:AY049290 IPI:IPI00522412
RefSeq:NP_001030659.1 RefSeq:NP_001118599.1 RefSeq:NP_187422.1
RefSeq:NP_974250.1 UniGene:At.18337 STRING:Q9SSE5 PRIDE:Q9SSE5
EnsemblPlants:AT3G07650.1 EnsemblPlants:AT3G07650.2
EnsemblPlants:AT3G07650.3 EnsemblPlants:AT3G07650.4 GeneID:819956
KEGG:ath:AT3G07650 TAIR:At3g07650 InParanoid:Q9SSE5 OMA:TSHIQTE
PhylomeDB:Q9SSE5 Genevestigator:Q9SSE5 GermOnline:AT3G07650
GO:GO:0048579 Uniprot:Q9SSE5
Length = 372
Score = 119 (46.9 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCN 69
CD C +R+ YC +D A LC CD SVHSAN L+ RH R + CN
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV--CERCN 52
Score = 114 (45.2 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
R V RY+EK++ R F K++RY RK A+ R R+KGRFVK
Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
Score = 78 (32.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 8 TANAMGGKTARA--CDGCLRKRARWYCVADDAFLCQGCDASVH--SANQLAS-------R 56
+ANA+ + +R C+ C + A CV + LCQ CD S H S N +S +
Sbjct: 34 SANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQ 93
Query: 57 HERVRLETASSCNNNNKL 74
H+R + S C ++++L
Sbjct: 94 HKRQTISCYSGCPSSSEL 111
>TAIR|locus:2164718 [details] [associations]
symbol:BBX8 "B-box domain protein 8" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005886 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB023039 EMBL:AY039957 EMBL:AY142607
IPI:IPI00527282 RefSeq:NP_199636.1 UniGene:At.7080
ProteinModelPortal:Q9LUA9 IntAct:Q9LUA9 STRING:Q9LUA9
EnsemblPlants:AT5G48250.1 GeneID:834878 KEGG:ath:AT5G48250
TAIR:At5g48250 eggNOG:NOG248444 HOGENOM:HOG000116529
InParanoid:Q9LUA9 OMA:ESACEQG PhylomeDB:Q9LUA9
ProtClustDB:CLSN2684850 Genevestigator:Q9LUA9 GermOnline:AT5G48250
Uniprot:Q9LUA9
Length = 373
Score = 116 (45.9 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCN 69
CD C +R+ YC +D A LC CD +VHSAN L+ RH R + CN
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV--CERCN 52
Score = 111 (44.1 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
R V RY+EK++ R F K++RY RK A+ R R+KGRFVK
Sbjct: 316 RNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVK 357
Score = 81 (33.6 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 8 TANAMGGKTARA--CDGCLRKRARWYCVADDAFLCQGCDASVHSANQ--LASRHERVRLE 63
+ANA+ + +R C+ C + A C + LCQ CD S H S H+R +
Sbjct: 34 SANALSKRHSRTLVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTIN 93
Query: 64 TASSCNNNNKL 74
S C ++ +L
Sbjct: 94 CYSGCPSSAEL 104
Score = 38 (18.4 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 10/37 (27%), Positives = 13/37 (35%)
Query: 297 GCPWTAGSRPEINLNHCWPYCTGLCCKGVHHHTCGGG 333
GCP +A L+ W +C L C G
Sbjct: 97 GCPSSA------ELSSIWSFCMDLNISSAEESACEQG 127
>TAIR|locus:2010504 [details] [associations]
symbol:BBX13 "B-box domain protein 13" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AC069471
HOGENOM:HOG000243233 ProtClustDB:CLSN2713949 EMBL:AY037206
EMBL:BT002681 IPI:IPI00538865 PIR:B86406 RefSeq:NP_174126.1
UniGene:At.19754 ProteinModelPortal:Q9C7E8 SMR:Q9C7E8 IntAct:Q9C7E8
STRING:Q9C7E8 PRIDE:Q9C7E8 EnsemblPlants:AT1G28050.1 GeneID:839698
KEGG:ath:AT1G28050 TAIR:At1g28050 eggNOG:NOG245106
InParanoid:Q9C7E8 OMA:SCGRYKQ PhylomeDB:Q9C7E8
Genevestigator:Q9C7E8 GermOnline:AT1G28050 Uniprot:Q9C7E8
Length = 433
Score = 116 (45.9 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 351 VSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
+ RY+EKR+TR + K IRYE RK A+ R R++GRFVK
Sbjct: 389 MQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVK 426
Score = 110 (43.8 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCNNNNKLINEHT 79
CD C + A +C AD A LC CD VH+AN L+ +H VR + +C N + T
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKH--VRSQICDNCGNEPVSVRCFT 66
Query: 80 D 80
D
Sbjct: 67 D 67
Score = 101 (40.6 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 22/63 (34%), Positives = 30/63 (47%)
Query: 8 TANAMGGKTARA--CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETA 65
TAN + K R+ CD C + C D+ LCQ CD VH + ++ H R +E
Sbjct: 38 TANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97
Query: 66 SSC 68
S C
Sbjct: 98 SGC 100
>TAIR|locus:2088748 [details] [associations]
symbol:BBX10 "B-box domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AP000739 HOGENOM:HOG000116529 EMBL:AB493626 IPI:IPI00533145
RefSeq:NP_188826.1 UniGene:At.53422 EnsemblPlants:AT3G21880.1
GeneID:821743 KEGG:ath:AT3G21880 TAIR:At3g21880 eggNOG:NOG290178
InParanoid:Q9LJ44 OMA:KKTRTFG PhylomeDB:Q9LJ44
ProtClustDB:CLSN2685267 Genevestigator:Q9LJ44 Uniprot:Q9LJ44
Length = 364
Score = 109 (43.4 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 348 EARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
EA++ RY+EK+ R F K+IRY RK A+ R R+KGRFVK
Sbjct: 309 EAKL-RYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVK 348
Score = 107 (42.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 21/40 (52%), Positives = 24/40 (60%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHER 59
CD C +A YC +D A LC CD VHSAN L+ RH R
Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIR 44
Score = 59 (25.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 8 TANAMGGKTARA--CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETA 65
+AN + + R+ C+ C + A C+ + CQGC H +N H L
Sbjct: 34 SANPLSHRHIRSLICEKCFSQPAAIRCLDEKVSYCQGCHW--HESNCSELGHRVQSLNPF 91
Query: 66 SSC 68
S C
Sbjct: 92 SGC 94
>UNIPROTKB|Q9FRZ6 [details] [associations]
symbol:Q9FRZ6 "Hd1" species:4530 "Oryza sativa" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0010229 "inflorescence development" evidence=IGI]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] InterPro:IPR000315
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041841 Gramene:Q9FRZ6 Genevestigator:Q9FRZ6
Uniprot:Q9FRZ6
Length = 259
Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 17 ARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRL 62
AR CDGC + YC AD A+LC CDA VH+AN++ASRHERVR+
Sbjct: 32 ARPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV 77
Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
Identities = 23/43 (53%), Positives = 26/43 (60%)
Query: 18 RACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERV 60
R C+ C R A C AD A LC CD V+SAN LA RH+RV
Sbjct: 76 RVCEACERAPAALACRADAAALCVACDVQVYSANPLARRHQRV 118
>UNIPROTKB|Q9FRZ7 [details] [associations]
symbol:Hd1 "Hd1 protein" species:39946 "Oryza sativa Indica
Group" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041839 EMBL:AB564434 Gramene:Q9FRZ7
Uniprot:Q9FRZ7
Length = 342
Score = 151 (58.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 17 ARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRL 62
AR CDGC + YC AD A+LC CDA VH+AN++ASRHERVR+
Sbjct: 32 ARPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV 77
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 23/43 (53%), Positives = 26/43 (60%)
Query: 18 RACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERV 60
R C+ C + A C AD A LC CD VHSAN LA RH+RV
Sbjct: 76 RVCEACEQAPAALACRADAAALCVACDVQVHSANPLARRHQRV 118
>TAIR|locus:2147274 [details] [associations]
symbol:BBX29 "B-box domain protein 29" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR000315 SMART:SM00336
EMBL:CP002688 GO:GO:0009555 GO:GO:0009409 GO:GO:0008270
GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000115162
ProtClustDB:CLSN2916189 EMBL:BT012358 EMBL:AK221519 IPI:IPI00528573
RefSeq:NP_200258.2 UniGene:At.43303 STRING:Q6NLH4
EnsemblPlants:AT5G54470.1 GeneID:835535 KEGG:ath:AT5G54470
TAIR:At5g54470 eggNOG:NOG303512 InParanoid:Q6NLH4 OMA:CESCLAR
Genevestigator:Q6NLH4 Uniprot:Q6NLH4
Length = 215
Score = 138 (53.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 50/177 (28%), Positives = 76/177 (42%)
Query: 12 MGGKTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCNNN 71
MG K C G AR YC +D A LC CD VH AN L ++H R L S+C ++
Sbjct: 1 MGKKKCELCCGV----ARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLL--CSACQSH 54
Query: 72 NKLINEHTDKD-TVPVWHQGFTRKARTPRHNNNKAMLMQQAKANEPLVPEIGCEDGSLQA 130
+ TV + RK NNN ++ + N+ IGC DG+
Sbjct: 55 TPWKASGLNLGPTVSICESCLARKK-----NNNSSLAGRDQNLNQE-EEIIGCNDGAESY 108
Query: 131 DDQVIDEQLLYQVPVFDPFEAVEPDENLIVDGYNGQDGTGDLDDLHGFLPSDLDLAE 187
D++ +++ +V AVE + ++ + G GD L DL+L++
Sbjct: 109 DEESDEDEEEEEVENQVVPAAVEQELPVVSSSSSVSSGEGDQVVKRTRLDLDLNLSD 165
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 123 (48.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
REA + ++R KR+ R F KK+RY+ RK AE+RPR+KG+FV+
Sbjct: 417 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 458
Score = 66 (28.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 23/97 (23%), Positives = 46/97 (47%)
Query: 8 TANAMGGKTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASS 67
T + +GG R D + ++R CV + L SV NQ S+H+++ L AS+
Sbjct: 230 TMDLIGGIDKRP-DSIYKDKSRDECVGPELGLSLKRSCSVSFENQDESKHQKLSLSDASA 288
Query: 68 CNNNNKLINEHTDKDTVPVWHQGFTRKARTPRHNNNK 104
+ + ++ +K V + + + + +TP ++ K
Sbjct: 289 FSRFEE--SKSAEKAVVAL-EESTSGEPKTPTESHEK 322
>TAIR|locus:2005624 [details] [associations]
symbol:BBX21 "B-box domain protein 21" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009641 "shade avoidance"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 GO:GO:0009641 HOGENOM:HOG000239240 EMBL:AC006434
EMBL:AB493536 IPI:IPI00536705 PIR:G96785 RefSeq:NP_177686.1
UniGene:At.34761 UniGene:At.69592 ProteinModelPortal:Q9LQZ7
SMR:Q9LQZ7 IntAct:Q9LQZ7 STRING:Q9LQZ7 EnsemblPlants:AT1G75540.1
GeneID:843890 KEGG:ath:AT1G75540 TAIR:At1g75540 eggNOG:NOG315170
InParanoid:Q9LQZ7 OMA:CDICQDK PhylomeDB:Q9LQZ7
ProtClustDB:CLSN2682536 Genevestigator:Q9LQZ7 GermOnline:AT1G75540
Uniprot:Q9LQZ7
Length = 331
Score = 140 (54.3 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCNNNNKLINEHT 79
CD C ++ A +C AD+A LC GCD VH AN+LAS+H R L SS N ++ L +
Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQ 64
Query: 80 DK 81
DK
Sbjct: 65 DK 66
>TAIR|locus:2199262 [details] [associations]
symbol:BBX27 "B-box domain protein 27" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016447 EMBL:AK117800 IPI:IPI00522806
PIR:C96705 RefSeq:NP_176986.1 UniGene:At.35557
ProteinModelPortal:Q9C9F4 EnsemblPlants:AT1G68190.1 GeneID:843148
KEGG:ath:AT1G68190 TAIR:At1g68190 eggNOG:NOG293044
HOGENOM:HOG000111890 InParanoid:Q9C9F4 OMA:CIADTAN PhylomeDB:Q9C9F4
ProtClustDB:CLSN2717503 Genevestigator:Q9C9F4 GermOnline:AT1G68190
Uniprot:Q9C9F4
Length = 356
Score = 132 (51.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 28/53 (52%), Positives = 31/53 (58%)
Query: 18 RACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCNN 70
R C+ C RA YC+AD A LC CDA VHSAN L+ RH R L SC N
Sbjct: 12 RVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL--CDSCKN 62
Score = 45 (20.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 335 VLRGCHLGAGGGREARVSRYREKRRTRLFSKK 366
V+ C + R+ ++R +EK+R R+ KK
Sbjct: 324 VISFCPSLSNNTRQKVITRLKEKKRARVEEKK 355
>TAIR|locus:2050130 [details] [associations]
symbol:BBX18 "B-box domain protein 18" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
evidence=RCA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008270
EMBL:AC006841 GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000239240
EMBL:AY060570 EMBL:AY125573 IPI:IPI00525924 PIR:H84599
RefSeq:NP_565507.1 UniGene:At.27367 ProteinModelPortal:Q9SJU5
SMR:Q9SJU5 STRING:Q9SJU5 EnsemblPlants:AT2G21320.1 GeneID:816671
KEGG:ath:AT2G21320 TAIR:At2g21320 eggNOG:NOG329451
InParanoid:Q9SJU5 OMA:KCNKLAS PhylomeDB:Q9SJU5
ProtClustDB:CLSN2914972 ArrayExpress:Q9SJU5 Genevestigator:Q9SJU5
Uniprot:Q9SJU5
Length = 172
Score = 122 (48.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 26/53 (49%), Positives = 30/53 (56%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRL---ETASSCN 69
CD C A +C AD+A LC CD VH N+LASRH RV L A SC+
Sbjct: 5 CDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCD 57
>TAIR|locus:2151206 [details] [associations]
symbol:PRR7 "pseudo-response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0010017 "red or far-red light signaling
pathway" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009639 "response to red or far red light" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0048574 "long-day photoperiodism, flowering" evidence=RCA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005739
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0035556 GO:GO:0003677 GO:GO:0007623 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:AB046954
EMBL:AL162973 EMBL:AY039943 EMBL:AY142560 IPI:IPI00520937
PIR:T48302 RefSeq:NP_568107.1 UniGene:At.20552
ProteinModelPortal:Q93WK5 SMR:Q93WK5 STRING:Q93WK5 PRIDE:Q93WK5
EnsemblPlants:AT5G02810.1 GeneID:831793 KEGG:ath:AT5G02810
GeneFarm:4348 TAIR:At5g02810 eggNOG:COG3437 HOGENOM:HOG000034018
InParanoid:Q93WK5 KO:K12129 OMA:HDERNIL PhylomeDB:Q93WK5
ProtClustDB:CLSN2917538 Genevestigator:Q93WK5 GermOnline:AT5G02810
GO:GO:0010017 GO:GO:0009266 Uniprot:Q93WK5
Length = 727
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSFMGSAND 398
REA ++++R+KR+ R F KK+RY+ RK AE+RPR++G+FV++T+ ND
Sbjct: 669 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDDND 720
>TAIR|locus:2062749 [details] [associations]
symbol:AT2G46670 "AT2G46670" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 GenomeReviews:CT485783_GR UniGene:At.65052
EMBL:AB493594 IPI:IPI00540845 RefSeq:NP_182190.2
EnsemblPlants:AT2G46670.1 GeneID:819279 KEGG:ath:AT2G46670
TAIR:At2g46670 PhylomeDB:C0SV91 Genevestigator:Q3EBF0
Uniprot:C0SV91
Length = 183
Score = 123 (48.4 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
REA + ++R KR+ R F KK+RY+ RK AE+RPR+KG+FV+
Sbjct: 132 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 173
>TAIR|locus:2061330 [details] [associations]
symbol:STH "salt tolerance homologue" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0019904 "protein domain specific binding"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0010224 "response to UV-B"
evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC007169 HOGENOM:HOG000239240 UniGene:At.24192
UniGene:At.69838 EMBL:AF323666 EMBL:AF325077 EMBL:AF370311
EMBL:AY063097 IPI:IPI00545007 PIR:A84720 RefSeq:NP_565722.1
ProteinModelPortal:Q9SID1 SMR:Q9SID1 IntAct:Q9SID1 STRING:Q9SID1
EnsemblPlants:AT2G31380.1 GeneID:817696 KEGG:ath:AT2G31380
TAIR:At2g31380 eggNOG:NOG279894 InParanoid:Q9SID1 OMA:CAKCDVE
PhylomeDB:Q9SID1 ProtClustDB:CLSN2682276 Genevestigator:Q9SID1
GermOnline:AT2G31380 Uniprot:Q9SID1
Length = 238
Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASS 67
CD C + A C AD+A LC CD VH+AN+LAS+H+R+ L++ S+
Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLST 52
Score = 110 (43.8 bits), Expect = 0.00099, P = 0.00099
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHER-----VRLETAS-SCN 69
CD CL K A +CV D A LC+ CD + H+ N ++ H+R +R+ +S SCN
Sbjct: 57 CDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCN 112
>TAIR|locus:1009023318 [details] [associations]
symbol:BBX30 "B-box domain protein 30" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270
GO:GO:0005622 EMBL:DQ487602 IPI:IPI00657516 RefSeq:NP_001031645.1
UniGene:At.63271 EnsemblPlants:AT4G15248.1 GeneID:3769879
KEGG:ath:AT4G15248 TAIR:At4g15248 OMA:ELCGENA PhylomeDB:Q1G3I2
Genevestigator:Q2V3I2 Uniprot:Q1G3I2
Length = 117
Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 24/45 (53%), Positives = 28/45 (62%)
Query: 15 KTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHER 59
K +C+ C + A YC AD AFLC+ CD VHSAN LA RH R
Sbjct: 27 KAPVSCELC-GENATVYCEADAAFLCRKCDRWVHSANFLARRHLR 70
>TAIR|locus:2198841 [details] [associations]
symbol:STO "SALT TOLERANCE" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009640 "photomorphogenesis" evidence=IGI]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009651
"response to salt stress" evidence=IGI;RCA] [GO:0009737 "response
to abscisic acid stimulus" evidence=RCA] [GO:0046686 "response to
cadmium ion" evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0080167 GO:GO:0009640 EMBL:AC024174 HOGENOM:HOG000239240
ProtClustDB:CLSN2682276 EMBL:X95572 EMBL:AY079377 EMBL:AY045794
IPI:IPI00518701 PIR:E86195 RefSeq:NP_172094.1 UniGene:At.23289
UniGene:At.38035 UniGene:At.70752 ProteinModelPortal:Q96288
SMR:Q96288 IntAct:Q96288 MINT:MINT-189223 STRING:Q96288
EnsemblPlants:AT1G06040.1 GeneID:837113 KEGG:ath:AT1G06040
TAIR:At1g06040 eggNOG:NOG313367 InParanoid:Q96288 OMA:PRCDICQ
PhylomeDB:Q96288 Genevestigator:Q96288 Uniprot:Q96288
Length = 248
Score = 124 (48.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASS 67
CD C + A C AD+A LC CD +H+AN+LAS+H+R+ L + S+
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLST 52
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 10 NAMGGKTARACDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHER 59
N++ K R CD C K A +CV D A LC+ CD S+H AN ++ H+R
Sbjct: 48 NSLSTKFPR-CDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQR 96
>TAIR|locus:2207155 [details] [associations]
symbol:AT1G05290 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002684 GO:GO:0003700 EMBL:DQ446230 IPI:IPI00535628
RefSeq:NP_172021.2 UniGene:At.51486 EnsemblPlants:AT1G05290.1
GeneID:837025 KEGG:ath:AT1G05290 TAIR:At1g05290 OMA:FEILQIF
PhylomeDB:Q1PFY3 ProtClustDB:CLSN2920218 ArrayExpress:Q1PFY3
Genevestigator:Q1PFY3 Uniprot:Q1PFY3
Length = 369
Score = 113 (44.8 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
RE RY EK++ R F K+IRYE RK A+ + RMKGRF K
Sbjct: 307 REEAKKRYFEKKKKRKFGKQIRYESRKSTADTKKRMKGRFTK 348
Score = 48 (22.0 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 37 AFLCQGCDASVHSANQLASRHERVRLETASSCNNNNKLI 75
A LC CD +HS + + + + R+ ++C + L+
Sbjct: 10 ARLCLQCDLKLHSKSSV-NNYNYSRIPLCNNCVSQTALV 47
Score = 43 (20.2 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 146 FDPFEAVEPDENLIVDGYNGQDGTGDLDDLHGFLPS-DLDLAE 187
F +E E EN++++ ++G + + DL + P DL L E
Sbjct: 162 FKSYETKEDIENVLMNTFDGAEAA--VLDLKQYNPEEDLILTE 202
Score = 38 (18.4 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGC 43
C+ C+ + A + LCQ C
Sbjct: 37 CNNCVSQTALVESLEQGLCLCQSC 60
>TAIR|locus:2095562 [details] [associations]
symbol:BBX31 "B-box domain protein 31" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010224 "response to UV-B" evidence=IEP;RCA] [GO:0009744
"response to sucrose stimulus" evidence=RCA] InterPro:IPR000315
Pfam:PF00643 SMART:SM00336 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 GO:GO:0010224
EMBL:AB028622 EMBL:AY086564 EMBL:AB493627 IPI:IPI00531471
RefSeq:NP_188827.1 UniGene:At.37979 ProteinModelPortal:Q9LRM4
EnsemblPlants:AT3G21890.1 GeneID:821744 KEGG:ath:AT3G21890
TAIR:At3g21890 eggNOG:NOG259331 HOGENOM:HOG000090727
InParanoid:Q9LRM4 OMA:CEADSAF PhylomeDB:Q9LRM4
ProtClustDB:CLSN2685268 Genevestigator:Q9LRM4 Uniprot:Q9LRM4
Length = 121
Score = 106 (42.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/61 (44%), Positives = 33/61 (54%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLETASSCNNNNK--LINE 77
CDG A +C AD AFLC+ CD VH AN LA RH VR +SC + L+ +
Sbjct: 34 CDG----DASVFCEADSAFLCRKCDRWVHGANFLAWRH--VRRVLCTSCQKLTRRCLVGD 87
Query: 78 H 78
H
Sbjct: 88 H 88
>TAIR|locus:2122759 [details] [associations]
symbol:bbx23 "B-box domain protein 23" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AF096373 EMBL:AL161516 HOGENOM:HOG000239240
EMBL:AL049488 EMBL:AY122916 IPI:IPI00525768 PIR:T01973
RefSeq:NP_192762.1 UniGene:At.33641 ProteinModelPortal:O82617
SMR:O82617 EnsemblPlants:AT4G10240.1 GeneID:826615
KEGG:ath:AT4G10240 TAIR:At4g10240 eggNOG:NOG273282
InParanoid:O82617 OMA:TENSECS PhylomeDB:O82617
ProtClustDB:CLSN2915973 Genevestigator:O82617 Uniprot:O82617
Length = 162
Score = 113 (44.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRLE 63
C+ C + A C +D+A LC+ CD VH AN+L RH RV L+
Sbjct: 5 CEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQ 48
>TAIR|locus:2018344 [details] [associations]
symbol:AT1G04500 "AT1G04500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:DQ446226 EMBL:AB493431
IPI:IPI00533670 RefSeq:NP_171944.2 UniGene:At.42446
EnsemblPlants:AT1G04500.1 GeneID:839510 KEGG:ath:AT1G04500
TAIR:At1g04500 HOGENOM:HOG000239716 InParanoid:Q1PFY7 OMA:SPSCSFL
PhylomeDB:Q1PFY7 ProtClustDB:CLSN2680683 Genevestigator:Q1PFY7
Uniprot:Q1PFY7
Length = 386
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSFMGSAN 397
R+ ++ RY +KR R FSKKI+Y RK A+ RPR++GRF K F G N
Sbjct: 288 RKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEF-GEPN 337
>TAIR|locus:2051099 [details] [associations]
symbol:AT2G33350 "AT2G33350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 ProtClustDB:CLSN2680683 EMBL:AY600556 IPI:IPI00520380
RefSeq:NP_180893.2 UniGene:At.50819 EnsemblPlants:AT2G33350.1
GeneID:817898 KEGG:ath:AT2G33350 TAIR:At2g33350 InParanoid:Q6E267
OMA:GSEINKP PhylomeDB:Q6E267 Genevestigator:Q6E267 Uniprot:Q6E267
Length = 410
Score = 122 (48.0 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSFMGSAN-DALQYH 403
R+ ++ RY +KR R F+KKI+Y RK A+ RPR++GRF K F G N A H
Sbjct: 311 RKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEF-GEPNRQAFSSH 367
Score = 42 (19.8 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 66 SSCNNNNKLINEHTDKD 82
S+ NNNNK N D+D
Sbjct: 72 SNNNNNNKNTNLQDDED 88
>TAIR|locus:2178441 [details] [associations]
symbol:AT5G53420 "AT5G53420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 EMBL:AY099753 EMBL:BT000280 IPI:IPI00547333
RefSeq:NP_568793.1 UniGene:At.8948 PRIDE:Q8L602
EnsemblPlants:AT5G53420.1 GeneID:835423 KEGG:ath:AT5G53420
TAIR:At5g53420 InParanoid:Q8L602 OMA:TINENQD PhylomeDB:Q8L602
ProtClustDB:CLSN2690008 ArrayExpress:Q8L602 Genevestigator:Q8L602
Uniprot:Q8L602
Length = 264
Score = 106 (42.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
R ++SRY+ K+ R F +KI+Y RK A+ +PR++GRF K
Sbjct: 218 RREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAK 259
Score = 50 (22.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 26/107 (24%), Positives = 42/107 (39%)
Query: 120 EIGCEDGSLQADDQVIDEQLLYQVPVFDPFEAVEPDENLIVDGYNGQDGTGDLDDLHGFL 179
+IG E +A D +++E +L DP A +I G + G +L DL G L
Sbjct: 49 DIGEESDLFRAPDPILEEPIL----TVDPLSAAL---TMISCGEDTSQGLCELPDL-GSL 100
Query: 180 PSD---LDLAEFAADVESXXXXXXXALDEDSCDVKEFWTLLDCKEEE 223
S LD A + + + + D D+K + E +
Sbjct: 101 QSGQQLLDKAFYECEQDLMMKSAMESPFSDVLDIKNISVVTTINENQ 147
>TAIR|locus:2132902 [details] [associations]
symbol:AT4G27900 "AT4G27900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002687 EMBL:AL161572 EMBL:AL035524 EMBL:AY062469
EMBL:AY093297 IPI:IPI00527124 PIR:T02891 RefSeq:NP_194519.1
RefSeq:NP_849461.1 UniGene:At.26998 IntAct:Q9SUE8 PRIDE:Q9SUE8
EnsemblPlants:AT4G27900.1 EnsemblPlants:AT4G27900.2 GeneID:828903
KEGG:ath:AT4G27900 TAIR:At4g27900 HOGENOM:HOG000241629
InParanoid:Q9SUE8 OMA:ISCTSED PhylomeDB:Q9SUE8
ProtClustDB:CLSN2685530 Genevestigator:Q9SUE8 Uniprot:Q9SUE8
Length = 261
Score = 109 (43.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
R ++SRYR K+ R F +KI+Y RK A+ +PR++GRF K
Sbjct: 214 RREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAK 255
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 114 NEPLVPEIGCEDGSLQADDQVIDE 137
++ LV E+G + GSLQ+D Q+ID+
Sbjct: 72 SQELV-ELG-DLGSLQSDQQLIDK 93
>TAIR|locus:2168083 [details] [associations]
symbol:AT5G59990 "AT5G59990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB015475 EMBL:AY924872
IPI:IPI00537727 RefSeq:NP_200807.1 UniGene:At.55631
EnsemblPlants:AT5G59990.1 GeneID:836121 KEGG:ath:AT5G59990
TAIR:At5g59990 HOGENOM:HOG000064609 InParanoid:Q9FJD8 OMA:RESSTVW
PhylomeDB:Q9FJD8 ProtClustDB:CLSN2686501 ArrayExpress:Q9FJD8
Genevestigator:Q9FJD8 Uniprot:Q9FJD8
Length = 241
Score = 114 (45.2 bits), Expect = 0.00036, P = 0.00036
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 388
++ ++ +YR KR R F+K+I+YE RK A+ RPR++GRF +
Sbjct: 163 KKEKIEKYRSKRNLRNFNKRIKYECRKTLADSRPRIRGRFAR 204
>TAIR|locus:2120207 [details] [associations]
symbol:BZS1 "BZS1" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IEP]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0080167
GO:GO:0010200 EMBL:AL035679 EMBL:AL161594 EMBL:AK118879
EMBL:BT028893 IPI:IPI00535007 PIR:T06067 RefSeq:NP_195618.2
UniGene:At.31120 ProteinModelPortal:Q0IGM7 SMR:Q0IGM7 PRIDE:Q0IGM7
EnsemblPlants:AT4G39070.1 GeneID:830062 KEGG:ath:AT4G39070
TAIR:At4g39070 eggNOG:NOG257043 HOGENOM:HOG000239240
InParanoid:Q0IGM7 OMA:DICGERR PhylomeDB:Q0IGM7
ProtClustDB:CLSN2915067 Genevestigator:Q0IGM7 GO:GO:0009741
Uniprot:Q0IGM7
Length = 242
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 20 CDGCLRKRARWYCVADDAFLCQGCDASVHSANQLASRHERVRL 62
C C ++ A +C AD+A LC GCD VH AN+LA +H R L
Sbjct: 5 CAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSL 47
>TAIR|locus:2163198 [details] [associations]
symbol:TOC1 "TIMING OF CAB EXPRESSION 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010031 "circumnutation" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010629 "negative regulation of gene expression"
evidence=IDA] [GO:0009639 "response to red or far red light"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072
Pfam:PF06203 PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0006351
GO:GO:0010629 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AB041530 EMBL:AF272039 EMBL:AJ251086 EMBL:AB010073
EMBL:AY094393 EMBL:BT005816 IPI:IPI00517214 PIR:T52075 PIR:T52076
RefSeq:NP_200946.1 UniGene:At.21919 ProteinModelPortal:Q9LKL2
SMR:Q9LKL2 IntAct:Q9LKL2 STRING:Q9LKL2 EnsemblPlants:AT5G61380.1
GeneID:836259 KEGG:ath:AT5G61380 GeneFarm:4313 TAIR:At5g61380
eggNOG:NOG242953 HOGENOM:HOG000034017 InParanoid:Q9LKL2 KO:K12127
OMA:IPIIMMS PhylomeDB:Q9LKL2 ProtClustDB:CLSN2686914
Genevestigator:Q9LKL2 GermOnline:AT5G61380 GO:GO:0010031
Uniprot:Q9LKL2
Length = 618
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 347 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 389
RE + ++R KR R F KKIRY RK AE+RPR+KG+FV++
Sbjct: 533 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 575
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 403 380 0.00090 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 625 (66 KB)
Total size of DFA: 280 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.90u 0.09s 28.99t Elapsed: 00:00:01
Total cpu time: 28.91u 0.09s 29.00t Elapsed: 00:00:01
Start: Sat May 11 13:29:06 2013 End: Sat May 11 13:29:07 2013