Query 015646
Match_columns 403
No_of_seqs 192 out of 1961
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 16:13:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015646.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015646hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 1.6E-74 5.4E-79 587.2 39.9 399 1-402 105-514 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 3.4E-72 1.2E-76 568.8 38.1 392 1-402 97-495 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 2.1E-68 7E-73 545.3 33.0 389 1-402 106-497 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 3.7E-64 1.3E-68 508.8 31.7 370 1-402 88-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 2.6E-62 8.9E-67 497.5 30.5 375 1-400 85-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 8.4E-58 2.9E-62 467.7 32.6 374 1-400 108-523 (523)
7 1zr6_A Glucooligosaccharide ox 100.0 9.4E-58 3.2E-62 465.9 32.1 369 1-402 94-480 (503)
8 2y3s_A TAML; oxidoreductase; H 100.0 2E-57 6.9E-62 465.2 33.9 377 1-402 109-529 (530)
9 2ipi_A Aclacinomycin oxidoredu 100.0 9.4E-57 3.2E-61 460.0 34.3 372 1-401 106-520 (521)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 6.2E-55 2.1E-59 441.2 26.7 361 1-400 88-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 2.5E-32 8.5E-37 280.7 25.3 133 1-136 121-261 (534)
12 4bby_A Alkyldihydroxyacetoneph 100.0 2.4E-28 8.3E-33 256.3 16.0 143 1-144 260-408 (658)
13 2exr_A Cytokinin dehydrogenase 99.9 2.2E-26 7.4E-31 235.5 26.2 140 1-142 112-260 (524)
14 3pm9_A Putative oxidoreductase 99.9 6.2E-27 2.1E-31 236.4 20.5 145 1-146 102-253 (476)
15 1wvf_A 4-cresol dehydrogenase 99.9 2.3E-24 7.8E-29 220.8 28.5 146 1-148 109-268 (520)
16 2uuu_A Alkyldihydroxyacetoneph 99.9 4.8E-25 1.7E-29 227.5 22.3 144 1-145 191-339 (584)
17 4feh_A Oxidoreductase DPRE1; a 99.9 3.2E-24 1.1E-28 216.7 27.0 141 1-146 94-238 (481)
18 2vfr_A Xylitol oxidase, aldito 99.9 1.3E-23 4.3E-28 210.0 23.1 119 1-125 67-188 (422)
19 1e8g_A Vanillyl-alcohol oxidas 99.9 2.3E-21 7.8E-26 199.9 28.1 146 1-148 124-300 (560)
20 2yvs_A Glycolate oxidase subun 99.9 2.4E-22 8.3E-27 182.1 11.5 118 7-130 1-124 (219)
21 1f0x_A DLDH, D-lactate dehydro 99.8 7.8E-20 2.7E-24 187.5 7.8 142 1-145 101-297 (571)
22 2i0k_A Oxidoreductase; MIX alp 99.8 7.6E-19 2.6E-23 181.0 12.5 119 2-125 92-226 (561)
23 3js8_A Cholesterol oxidase; ch 99.8 7.9E-19 2.7E-23 177.7 12.2 117 2-124 86-221 (540)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.5 6E-15 2.1E-19 141.1 7.6 109 1-122 104-217 (322)
25 3i99_A UDP-N-acetylenolpyruvoy 99.5 3.5E-14 1.2E-18 137.3 10.2 111 4-122 81-199 (357)
26 1hsk_A UDP-N-acetylenolpyruvoy 99.5 4.3E-14 1.5E-18 135.8 6.8 106 1-120 98-209 (326)
27 1uxy_A MURB, uridine diphospho 99.4 6.6E-13 2.2E-17 127.9 10.9 110 4-122 65-183 (340)
28 2gqt_A UDP-N-acetylenolpyruvyl 99.4 2E-13 6.8E-18 127.1 4.3 106 1-121 66-173 (268)
29 1f0x_A DLDH, D-lactate dehydro 90.0 0.4 1.4E-05 48.9 6.3 54 323-401 510-563 (571)
30 1ffv_C CUTM, flavoprotein of c 79.9 1.8 6.3E-05 39.9 4.9 103 3-120 59-177 (287)
31 2i0k_A Oxidoreductase; MIX alp 56.8 4.6 0.00016 41.0 2.3 23 374-396 533-555 (561)
32 2crl_A Copper chaperone for su 45.4 48 0.0016 24.4 6.0 35 4-38 46-80 (98)
33 1n62_C Carbon monoxide dehydro 44.7 8.6 0.00029 35.3 1.8 101 4-119 60-176 (288)
34 3js8_A Cholesterol oxidase; ch 42.2 8.5 0.00029 38.7 1.5 23 373-395 511-533 (540)
35 2w3s_A Xanthine dehydrogenase; 31.2 17 0.0006 35.7 1.7 104 4-119 231-345 (462)
36 4a4j_A Pacszia, cation-transpo 23.1 1.2E+02 0.0041 19.8 4.6 32 6-37 32-65 (69)
37 3owt_C Regulatory protein SIR3 22.7 33 0.0011 18.6 1.0 13 375-387 10-22 (27)
38 3iwl_A Copper transport protei 21.7 1.4E+02 0.0049 19.6 4.7 32 6-37 30-61 (68)
39 2xmm_A SSR2857 protein, ATX1; 21.3 1.5E+02 0.0051 18.5 4.6 33 4-36 29-61 (64)
40 2dt7_A Splicing factor 3A subu 20.5 37 0.0013 20.8 1.1 13 374-386 14-26 (38)
41 2roe_A Heavy metal binding pro 20.4 1.8E+02 0.006 18.6 5.0 33 4-36 28-60 (66)
42 2gvs_A Chemosensory protein CS 20.2 34 0.0012 26.4 1.1 16 378-393 82-97 (109)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.6e-74 Score=587.22 Aligned_cols=399 Identities=49% Similarity=0.916 Sum_probs=338.0
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEEe
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLVD 80 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV~ 80 (403)
|++||+|++|+++++|+||||+++++|+++|.++++++.+++|.|++|||||+++|||+|+++++||+++|+|+++|||+
T Consensus 105 l~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~ 184 (518)
T 3vte_A 105 LRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVN 184 (518)
T ss_dssp CTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEEC
T ss_pred CCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEc
Confidence 68999999999999999999999999999999987778889999999999999999999999999999999999999999
Q ss_pred cCccEEecCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecch-hhHHHHHHHHHHHHhcCCCCCceEE
Q 015646 81 VSGRLLDRKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTLE-QNATEIVYRWQQVASKQLPDDLFVR 159 (403)
Q Consensus 81 a~G~~~~~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~ 159 (403)
+||++++.+.+|+|||||+||||+|+|||||+++||++|.|+.+..|.+.+.+. +++.+++.+|+++.+. +|+++++.
T Consensus 185 adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~p~~l~~~ 263 (518)
T 3vte_A 185 VDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIAYK-YDKDLVLM 263 (518)
T ss_dssp TTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHHHGGG-SCTTEEEE
T ss_pred cCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHc-CCHhHeEE
Confidence 999999744468999999999855899999999999999999887888877654 6678899999999988 99999999
Q ss_pred EEEeeecCC---CCCCceEEEEEEEEEecChhhHHhhhhccCCcCCCCcCcceeecHHHHHHhhhccCCC-Cc---cccc
Q 015646 160 LILDVVNGT---KSGTKTVRASFLSLFLGDSNRLLSIMNESFPELGLAQSDCIETSWIRSVLFWTNFQID-DP---LNIL 232 (403)
Q Consensus 160 ~~~~~~~~~---~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~ 232 (403)
+.+...++. ..+...+.+.+.++|.|+.+++.+.|.+.+++++....++.+++|.+.+.++..++.+ .+ .+.+
T Consensus 264 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~l 343 (518)
T 3vte_A 264 THFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWIDTTIFYSGVVNFNTANFKKEIL 343 (518)
T ss_dssp EEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHHHHHHHTSSSCCC-----CGGGG
T ss_pred EEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchhhhhhhhhcCCccCCccchhhhh
Confidence 888753210 1111235678899999999999988887777777666778899999988887655443 33 4556
Q ss_pred cCCCCCCCccceeccccccCCCCHhHHHHHHHHHHhC--CCcEEEEEeCCCccCCCCCCCCCcccccCceEEEEEEeEeC
Q 015646 233 LNRTPPTLTFLKRKSDYVKQPIPKNGLEFIWKRMIEL--ETPQMIFNPYGGKMAEIPSTATPFPHRAGNLWKIQYVTNWN 310 (403)
Q Consensus 233 ~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~Gg~~~~~~~~~tafp~R~~~~~~~~~~~~W~ 310 (403)
++|....+.+||.||.|+.+++++++|+.+++.+.+. +.+.+.|.++||+++++++++||||||+++.|.+++.+.|.
T Consensus 344 ~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~ 423 (518)
T 3vte_A 344 LDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYTASWE 423 (518)
T ss_dssp GCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSCTTSSSCCCCTTCCEEEEEEEEEC
T ss_pred ccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCCCCCCcccccCcceEEEEEEEecC
Confidence 6664444567889999998889999999999988763 35788999999999999999999999984489999999997
Q ss_pred CCCchhhHHHHHHHHHHHhcccccccCCCCcccccccCCccC-CCCCCCchhHHHhhhhhhccccchHHHHHhhhhcCCC
Q 015646 311 EPGTDAANRYLNLTRKLYGYMTPFVSKNPRQAFFNYRDIDLG-INHNGKASFEEAKAYGIKYFLGNFNRLVKIKTKVDPG 389 (403)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~-~~~~~~~~~~~~~~~~~~y~G~n~~rL~~iK~kyDP~ 389 (403)
++ +.++++.+|++++++.|.|+.+..+.|+|+||+|.+++ .+..+..+++.++.|++.|||+||+||++||+||||+
T Consensus 424 ~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~ 501 (518)
T 3vte_A 424 KQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPN 501 (518)
T ss_dssp CT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHHHHHHSSTHHHHHHHHHHHHCTT
T ss_pred Cc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhhHHHHHhHhHHHHHHHHHhhcCch
Confidence 65 45678899999999999999765567999999998876 3212233455667899999999999999999999999
Q ss_pred CCccCCCCcCCCC
Q 015646 390 NFFRNEQSIPVLP 402 (403)
Q Consensus 390 n~F~~~~~I~p~~ 402 (403)
|||+++|+|+|.+
T Consensus 502 n~F~~~QsI~p~~ 514 (518)
T 3vte_A 502 NFFRNEQSIPPLP 514 (518)
T ss_dssp CCSCCTTCCCCCC
T ss_pred hcccCCCCCCCCC
Confidence 9999999999964
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=3.4e-72 Score=568.76 Aligned_cols=392 Identities=42% Similarity=0.782 Sum_probs=332.7
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEEe
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLVD 80 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV~ 80 (403)
|++||+|++|+++++|+||||+++++|+++|.+++.++.+++|.|++|||||+++|||+|.++++||+++|+|+++|||+
T Consensus 97 l~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~ 176 (495)
T 3fw9_A 97 LMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILID 176 (495)
T ss_dssp CTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEEC
T ss_pred CCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEc
Confidence 68899999999999999999999999999999997678889999999999999999999999999999999999999999
Q ss_pred cCccEEecCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecch-hhHHHHHHHHHHHHhcCCCCCceEE
Q 015646 81 VSGRLLDRKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTLE-QNATEIVYRWQQVASKQLPDDLFVR 159 (403)
Q Consensus 81 a~G~~~~~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~ 159 (403)
+||++++++.+|+|||||+|||++|+|||||+++||++|.|+.+..+.+.++.+ +++.+++..|++++.. +|+++++.
T Consensus 177 adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~-~~~~l~~~ 255 (495)
T 3fw9_A 177 ANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVAEE-LEEDFTLS 255 (495)
T ss_dssp TTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHHHHHHH-SCTTEEEE
T ss_pred CCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHHHHHhc-CChhHeEE
Confidence 999999744568999999999655899999999999999999887887777653 6678899999999988 99999987
Q ss_pred EEEeeecCCCCCCceEEEEEEEEEecChhhHHhhhhccCCcCCCCcCcceeecHHHHHHhhhccCCCCccccccCCCCC-
Q 015646 160 LILDVVNGTKSGTKTVRASFLSLFLGDSNRLLSIMNESFPELGLAQSDCIETSWIRSVLFWTNFQIDDPLNILLNRTPP- 238 (403)
Q Consensus 160 ~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~- 238 (403)
+..... ...+.+.+.++|.|+++++.+.|++.+++++....++.+++|.+.+.++.+++. .+.++++...
T Consensus 256 ~~~~~~------~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~ 326 (495)
T 3fw9_A 256 VLGGAD------EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLET---VSQLNNRFLKF 326 (495)
T ss_dssp EEEEEE------TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSC---GGGGGCTTSCS
T ss_pred EEEcCC------CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccc---hhhhcCCCCCc
Confidence 775411 223567889999999999988888777777766677889999998877654332 3344555332
Q ss_pred CCccceeccccccCCCCHhHHHHHHHHHHhCCCcEEEEEeCCCccCCCCCCCCCcccccCceEEEEEEeEeCCCCchhhH
Q 015646 239 TLTFLKRKSDYVKQPIPKNGLEFIWKRMIELETPQMIFNPYGGKMAEIPSTATPFPHRAGNLWKIQYVTNWNEPGTDAAN 318 (403)
Q Consensus 239 ~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gg~~~~~~~~~tafp~R~~~~~~~~~~~~W~~~~~~~~~ 318 (403)
.+.+||.||.|+.+++++++++.+++.+.+.+...+.++++||++++++.++||||||+++.|.+++.+.|.++.++.++
T Consensus 327 ~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~ 406 (495)
T 3fw9_A 327 DERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQKKKT 406 (495)
T ss_dssp CCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTTCCEEEEEEEEECGGGGGGHH
T ss_pred cCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCccceEEEEEEecCCCCcchhH
Confidence 34678999999998899999999999988777778899999999999999999999998558999999999754334567
Q ss_pred HHHHHHHHHHhcccccccCCCCcccccccCCccCCCCC-----CCchhHHHhhhhhhccccchHHHHHhhhhcCCCCCcc
Q 015646 319 RYLNLTRKLYGYMTPFVSKNPRQAFFNYRDIDLGINHN-----GKASFEEAKAYGIKYFLGNFNRLVKIKTKVDPGNFFR 393 (403)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~-----~~~~~~~~~~~~~~y~G~n~~rL~~iK~kyDP~n~F~ 393 (403)
++.+|++++++.+.|+.+..+.++|+||+|.+++.++. +..++..++.|++.|||+||+||++||+||||+|||+
T Consensus 407 ~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL~~vK~~yDP~n~F~ 486 (495)
T 3fw9_A 407 EFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFN 486 (495)
T ss_dssp HHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHHHHHHHHHHhhCcHhhCC
Confidence 88999999999999997655678999999988752110 0123445668999999999999999999999999999
Q ss_pred CCCCcCCCC
Q 015646 394 NEQSIPVLP 402 (403)
Q Consensus 394 ~~~~I~p~~ 402 (403)
++|+|+|..
T Consensus 487 ~~qsI~p~~ 495 (495)
T 3fw9_A 487 HPQSIPPMA 495 (495)
T ss_dssp CTTCCCCCC
T ss_pred CCCCCCCCC
Confidence 999999964
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=2.1e-68 Score=545.26 Aligned_cols=389 Identities=50% Similarity=0.897 Sum_probs=319.9
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEEe
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLVD 80 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV~ 80 (403)
|++||+|++|+++++|+||||++++||+++|.++|+.+++++|+|++||+||+++|||+|+++++||+++|||+++||||
T Consensus 106 l~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vV~ 185 (500)
T 3tsh_A 106 LNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVD 185 (500)
T ss_dssp CTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEEC
T ss_pred CcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccCChhhheeeEEEEC
Confidence 68999999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred cCccEEecCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHHHHHHhcCCCCCceEEE
Q 015646 81 VSGRLLDRKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTLEQNATEIVYRWQQVASKQLPDDLFVRL 160 (403)
Q Consensus 81 a~G~~~~~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 160 (403)
|||+|++++++|+|||||+||||||||||||++++|++|+|+.+..+...+...+.+.+++..|+.+.+. +|+++...+
T Consensus 186 a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 264 (500)
T 3tsh_A 186 ANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVVAPQ-LPADLMIRI 264 (500)
T ss_dssp TTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHHHHHGGG-SCTTEEEEE
T ss_pred CCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHHHHhhhc-cChhhEEEE
Confidence 9999997556789999999988879999999999999999998877777776666778899999999888 898887766
Q ss_pred EEeeecCCCCCCceEEEEEEEEEecChhhHHhhhhccCCcCCCCcCcceeecHHHHHHhhhccCCCCccccccCCCCCCC
Q 015646 161 ILDVVNGTKSGTKTVRASFLSLFLGDSNRLLSIMNESFPELGLAQSDCIETSWIRSVLFWTNFQIDDPLNILLNRTPPTL 240 (403)
Q Consensus 161 ~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 240 (403)
.... +...+..+|.|+.+++.+.+...++.++.....+..++|.+...+..........+...++.....
T Consensus 265 ~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (500)
T 3tsh_A 265 IAQG----------PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRQNSFK 334 (500)
T ss_dssp EESS----------SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHCCSSCHHHHHHCCCCCCC
T ss_pred EecC----------CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhcccccccccccccccccc
Confidence 5431 145677889999988887776666666666666777888876655432222222223334433334
Q ss_pred ccceeccccccCCCCHhHHHHHHHHHHhCC-CcEEEEEeCCCccCCCCCCCCCcccccCceEEEEEEeEeCCCCchhhHH
Q 015646 241 TFLKRKSDYVKQPIPKNGLEFIWKRMIELE-TPQMIFNPYGGKMAEIPSTATPFPHRAGNLWKIQYVTNWNEPGTDAANR 319 (403)
Q Consensus 241 ~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~Gg~~~~~~~~~tafp~R~~~~~~~~~~~~W~~~~~~~~~~ 319 (403)
.+.+.++.+..++++.+.++.+++.+...+ ...+.++++||++.+++.++|+||||+..++++++...|.++. .+++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~~~R~~~l~~i~~~~~w~~~~--~~~~ 412 (500)
T 3tsh_A 335 PFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRKGVLFNIQYVNYWFAPG--AAAA 412 (500)
T ss_dssp CEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSCCCCTTCCEEEEEEEEECSTT--CCHH
T ss_pred chhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcCcccCCcEEEEEEEEecCCcc--hhHH
Confidence 455667777777788888888877665544 4677889999999999999999999986678999999998774 4567
Q ss_pred HHHHHHHHHhcccccccCCCCcccccccCCccCCCCC--CCchhHHHhhhhhhccccchHHHHHhhhhcCCCCCccCCCC
Q 015646 320 YLNLTRKLYGYMTPFVSKNPRQAFFNYRDIDLGINHN--GKASFEEAKAYGIKYFLGNFNRLVKIKTKVDPGNFFRNEQS 397 (403)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~--~~~~~~~~~~~~~~y~G~n~~rL~~iK~kyDP~n~F~~~~~ 397 (403)
..+|++++++.+.++.+..+.++|+||+|.+++.++. ....+...++|++.|||+||+||++||+||||+|+|+++|+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~Ny~RL~~IK~kyDP~nvF~~~qs 492 (500)
T 3tsh_A 413 PLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQS 492 (500)
T ss_dssp HHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTS
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhHHHHHHHHHHHHhCcccccCCCCC
Confidence 8899999999999987666779999999998864321 11234456789999999999999999999999999999999
Q ss_pred cCCCC
Q 015646 398 IPVLP 402 (403)
Q Consensus 398 I~p~~ 402 (403)
|+|..
T Consensus 493 I~Pl~ 497 (500)
T 3tsh_A 493 IPPLI 497 (500)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99964
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=3.7e-64 Score=508.80 Aligned_cols=370 Identities=23% Similarity=0.405 Sum_probs=297.4
Q ss_pred CCCCCeeE-EeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEE
Q 015646 1 MFNLHSVD-VDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLV 79 (403)
Q Consensus 1 l~~m~~i~-~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV 79 (403)
|++||+|. +|+++++|+||+|+++++|+++|.++| .+.+++|.|++|||||+++|||+|.++++||+++|+|+++|||
T Consensus 88 l~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~vV 166 (473)
T 3rja_A 88 LDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTVV 166 (473)
T ss_dssp CTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEE
T ss_pred CCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCCCcccccccchHhheeeEEEE
Confidence 68899997 999999999999999999999999987 3678899999999999999999999999999999999999999
Q ss_pred ecCccEEe-cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecch-h-hHHHHHHHHHHHHh-cCCCCC
Q 015646 80 DVSGRLLD-RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTLE-Q-NATEIVYRWQQVAS-KQLPDD 155 (403)
Q Consensus 80 ~a~G~~~~-~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~-~~~p~~ 155 (403)
++||++++ ++.+|+|||||+||++ |+|||||+++||++|.|+.+..+.+.+++. . ++.+++++|+++.. . +|++
T Consensus 167 ~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~ 244 (473)
T 3rja_A 167 LADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYARWV-APRE 244 (473)
T ss_dssp CTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHHHHT-CCTT
T ss_pred ecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHhhhC-CChh
Confidence 99999997 6778999999999997 899999999999999998887787777764 3 47789999999987 6 9999
Q ss_pred ceEEEEEeeecCCCCCCceEEEEEEEEEecChhhHHhhhhccCCcCC-CCcCcce-eecHHHHHHhhhccCCCCcccccc
Q 015646 156 LFVRLILDVVNGTKSGTKTVRASFLSLFLGDSNRLLSIMNESFPELG-LAQSDCI-ETSWIRSVLFWTNFQIDDPLNILL 233 (403)
Q Consensus 156 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (403)
+++.+.+. . + + .+.+.++|.|+++++.+.+++++...+ +...++. +++|.+...++.... ..+...
T Consensus 245 l~~~~~~~-~-~---~----~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 312 (473)
T 3rja_A 245 VNFRIGDY-G-A---G----NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSNFD---HVDFIT 312 (473)
T ss_dssp EEEEEEES-S-S---S----CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTSSSS---CCCCSS
T ss_pred HEEEEEEc-C-C---C----cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhhcCC---Cccccc
Confidence 98888765 2 1 1 257789999999999888876543332 3445677 899999776654211 111111
Q ss_pred CCCCCCCccceeccccccCCCCHhHHHHHHHHHHhC-C-----CcEEEEEeCCC---ccCCCCCCCCCcccccCceEEEE
Q 015646 234 NRTPPTLTFLKRKSDYVKQPIPKNGLEFIWKRMIEL-E-----TPQMIFNPYGG---KMAEIPSTATPFPHRAGNLWKIQ 304 (403)
Q Consensus 234 ~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~-~-----~~~~~~~~~Gg---~~~~~~~~~tafp~R~~~~~~~~ 304 (403)
. . ....++.+|.+.. ++++++++.+++.+.+. + .+.++++++|| ++.++++++||||||+ +.|.++
T Consensus 313 ~--~-~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf~hR~-~~~~~~ 387 (473)
T 3rja_A 313 P--Q-PVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAYPHRD-KLWLIQ 387 (473)
T ss_dssp C--C-CCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSCCCTT-CSEEEE
T ss_pred C--C-CCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCccccCC-ccEEEE
Confidence 1 0 1345678888754 69999999999988542 1 13577999998 6788999999999999 799999
Q ss_pred EEeEeCCCCchhhHHHHHHHHHHHhcccccccCCCCcccccccCCccCCCCCCCchhHHHhhhhhhccccchHHHHHhhh
Q 015646 305 YVTNWNEPGTDAANRYLNLTRKLYGYMTPFVSKNPRQAFFNYRDIDLGINHNGKASFEEAKAYGIKYFLGNFNRLVKIKT 384 (403)
Q Consensus 305 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~y~G~n~~rL~~iK~ 384 (403)
+...|.+.. +.+++..+|++++++.+.+.....+.|+|+||+|.+++ ..+|.+.|||+||+||++||+
T Consensus 388 ~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~~~~~~~yyg~n~~RL~~vK~ 455 (473)
T 3rja_A 388 FYDRYDNNQ-TYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------RDYATKVYYGENLARLQKLKA 455 (473)
T ss_dssp EEEEECTTS-CCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------HHHHHHHHHGGGHHHHHHHHH
T ss_pred EEEEeCCCC-ccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------chhHHHHHHHHHHHHHHHHhh
Confidence 999996311 12344567777666655443222345899999998864 247999999999999999999
Q ss_pred hcCCCCCccCCCCcCCCC
Q 015646 385 KVDPGNFFRNEQSIPVLP 402 (403)
Q Consensus 385 kyDP~n~F~~~~~I~p~~ 402 (403)
||||+|+|+++|+|+|.+
T Consensus 456 kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 456 KFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHCTTCTTCCTTSCCCCC
T ss_pred ccCchhhCCCCcCCCCCC
Confidence 999999999999999975
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=2.6e-62 Score=497.45 Aligned_cols=375 Identities=23% Similarity=0.355 Sum_probs=284.3
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHh-cCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEE
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISE-KSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLV 79 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~-~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV 79 (403)
|++||+|++|+++++|+||+|+++++|+++|.+ +| +.+++|.|++|||||+++|||+|+++++||+++|+|+++|||
T Consensus 85 l~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~evV 162 (501)
T 3pop_A 85 LHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVA 162 (501)
T ss_dssp CTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEEEEE
T ss_pred ecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEEEEEE
Confidence 689999999999999999999999999999974 55 668899999999999999999999999999999999999999
Q ss_pred e--cCcc--EEe----cCCCCcchhHHhhccCCCCeEEEEEEEEEE----------eecC-ceEEEEEEEecch----hh
Q 015646 80 D--VSGR--LLD----RKSMGEDLFWAIRGGGGASFGVVLAYRIKL----------VRVP-ETVTVFQVRKTLE----QN 136 (403)
Q Consensus 80 ~--a~G~--~~~----~~~~~~dLfwa~rG~gg~~fGivt~~~~~~----------~p~~-~~~~~~~~~~~~~----~~ 136 (403)
+ +||+ +++ ++.+|+|||||+||||+|+|||||+++||+ +|.+ ..++.+.+.|+.. +.
T Consensus 163 ~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~~~~~ 242 (501)
T 3pop_A 163 VVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMIDETS 242 (501)
T ss_dssp EECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGCCHHH
T ss_pred EecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhcCHHH
Confidence 9 8999 453 246789999999999668999999999999 6654 4566666776542 22
Q ss_pred HHHHHHHHHHHHhc-CCCCCc--eEEEEEeeecCCCCCCceEEEEEEEEEecChhhHHhhhhccCCc------CCCCcCc
Q 015646 137 ATEIVYRWQQVASK-QLPDDL--FVRLILDVVNGTKSGTKTVRASFLSLFLGDSNRLLSIMNESFPE------LGLAQSD 207 (403)
Q Consensus 137 ~~~~~~~~~~~~~~-~~p~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~------~~~~~~~ 207 (403)
+.+++..|+++... ..|+.. .....+..... ..+ .+.+..+|.|+.+++.+.+++++.. +.+...
T Consensus 243 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~~- 316 (501)
T 3pop_A 243 FVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV-SSG----VLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPR- 316 (501)
T ss_dssp HHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG-GGC----EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEEE-
T ss_pred HHHHHHHHHHHHhhccCCCccccceEEEEEecCC-CCC----eEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCccce-
Confidence 45778888877642 145443 23333322211 112 2455667788877665555543321 122223
Q ss_pred ceeecHHHHHHhhhccCCCCccccccCCCCCCCccceeccccccCCCCHhHHHHHHHHHHhC---CCcEEEEEeCCCccC
Q 015646 208 CIETSWIRSVLFWTNFQIDDPLNILLNRTPPTLTFLKRKSDYVKQPIPKNGLEFIWKRMIEL---ETPQMIFNPYGGKMA 284 (403)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~Gg~~~ 284 (403)
+.+++|.+....+. .+.+.+ . ...+++.+|.++.++++++.++.+++.+... +.+.+.++++||+++
T Consensus 317 ~~~~~~~~~~~~~~-~~~~~~---~------~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GGav~ 386 (501)
T 3pop_A 317 GGVMSWLTGTRYMS-QADCGD---V------MGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEIN 386 (501)
T ss_dssp EEEEEHHHHHHHTC-BCSCGG---G------TTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCGGGG
T ss_pred eEEeCHHHHHhhhc-CCCCCc---c------cccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCcccc
Confidence 77889988665432 111100 0 0134677899888789999999999988653 246788999999999
Q ss_pred CCCCCCCCcccccCceEEEEEEeEeCCCCchhhHHHHHHHHHHHhcccccc------cCCCCcccccccCCccCCCCCCC
Q 015646 285 EIPSTATPFPHRAGNLWKIQYVTNWNEPGTDAANRYLNLTRKLYGYMTPFV------SKNPRQAFFNYRDIDLGINHNGK 358 (403)
Q Consensus 285 ~~~~~~tafp~R~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~Y~Ny~d~~~~~~~~~~ 358 (403)
++++++||||||+ +.|++++...|.++ +.++++.+|++++++.+.++. +..+.|+|+||+|.+++.++. .
T Consensus 387 ~v~~~~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~~-~ 462 (501)
T 3pop_A 387 RRGPSDAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPAR-N 462 (501)
T ss_dssp GSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTTT-C
T ss_pred cCCCCCCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCcccccccc-c
Confidence 9999999999999 79999999999865 456778999999999886543 122469999999998762110 0
Q ss_pred chhHHHhhhhhhccccchHHHHHhhhhcCCCCCccCCCCcCC
Q 015646 359 ASFEEAKAYGIKYFLGNFNRLVKIKTKVDPGNFFRNEQSIPV 400 (403)
Q Consensus 359 ~~~~~~~~~~~~y~G~n~~rL~~iK~kyDP~n~F~~~~~I~p 400 (403)
. ....|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 463 ~---~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 463 R---SGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp C---SSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred c---ccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 0 01249999999999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=8.4e-58 Score=467.69 Aligned_cols=374 Identities=26% Similarity=0.432 Sum_probs=273.2
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHh-cCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEE
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISE-KSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLV 79 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~-~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV 79 (403)
|++||+|++|+++++|+||+|+++.+|+++|.+ +| +.+++|+|++|||||+++|||+|+++++||+++|+|+++|||
T Consensus 108 l~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV 185 (523)
T 2wdx_A 108 MSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVV 185 (523)
T ss_dssp CTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEEE
T ss_pred cccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCcccccccChhheEEEEEEE
Confidence 689999999999999999999999999999984 76 467889999999999999999999999999999999999999
Q ss_pred ecC--ccEE--e-cCC-CCcc--hhHHhhccCCCCeEEEEEEEEEE-----------eecCc-eEEEEEEEecch----h
Q 015646 80 DVS--GRLL--D-RKS-MGED--LFWAIRGGGGASFGVVLAYRIKL-----------VRVPE-TVTVFQVRKTLE----Q 135 (403)
Q Consensus 80 ~a~--G~~~--~-~~~-~~~d--Lfwa~rG~gg~~fGivt~~~~~~-----------~p~~~-~~~~~~~~~~~~----~ 135 (403)
++| |+++ + +.. +|+| ||||+||||+|||||||+++||+ +|.|+ .+..+.+.|+.. +
T Consensus 186 ~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 265 (523)
T 2wdx_A 186 VVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWAGMTEA 265 (523)
T ss_dssp EECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECCGGGCCHH
T ss_pred EecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEecccccCHH
Confidence 955 9975 2 332 5565 99999987768999999999999 99876 456667777642 2
Q ss_pred hHHHHHHHHHHHHhcC-CCCCc--eEEEEEeeecCCCCCCceEEEEEEEEEecChhhHHhhhhccCC---c-CC-CCcCc
Q 015646 136 NATEIVYRWQQVASKQ-LPDDL--FVRLILDVVNGTKSGTKTVRASFLSLFLGDSNRLLSIMNESFP---E-LG-LAQSD 207 (403)
Q Consensus 136 ~~~~~~~~~~~~~~~~-~p~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~---~-~~-~~~~~ 207 (403)
...++++.|+++.... .|+.. .....+..... ..+...+.+.+..+|.|+.++..+.+++++. + ++ +....
T Consensus 266 ~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~ 344 (523)
T 2wdx_A 266 AFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNE-VPGMGESGFMMPIQVDATRPDARRLLDAHIEAVIDGVPPAEVPE 344 (523)
T ss_dssp HHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECC-CTTCTTCSEEEEEEEETTSTTHHHHHHHHHHHHHTTCTTCBCCC
T ss_pred HHHHHHHHHHHHHhhcCCCCccccceEEEEEeccC-CCCCcceeEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 3457788888776431 35442 22222222211 1121112455667888887766665554321 1 22 22334
Q ss_pred ceeecHHHHHHhhhccCCCCccccccCCCCCCCccceeccccccCCCCHhHHHHHHHHHHhC---CCcEEEEEeCCCccC
Q 015646 208 CIETSWIRSVLFWTNFQIDDPLNILLNRTPPTLTFLKRKSDYVKQPIPKNGLEFIWKRMIEL---ETPQMIFNPYGGKMA 284 (403)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~Gg~~~ 284 (403)
+..++|.+....+ .. ...+++.++.++.+.++.+.++.+++.+... +.+.+.++.+||++.
T Consensus 345 ~~~~~~~~~~~~~-------------~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~v~ 408 (523)
T 2wdx_A 345 PIEQRWLASTPGR-------------GG---RGPASKTKAGYLRKRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGKVN 408 (523)
T ss_dssp CEEEETTSSCCCC-------------CS---SCCEEEEEEEEESSCCCHHHHHHHHHHHTCCTTCSEEEEEEEECCGGGG
T ss_pred ceeccHHHHHHhh-------------cC---CCCceeeecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCCccc
Confidence 4556665421100 00 0113556777776668888999999888653 235678899999999
Q ss_pred CCCCCCCCcccccCceEEEEEEeEeCCCCchhhHHHHHHHHHHHhccc------ccccCCCCcccccccCCccCCCCCCC
Q 015646 285 EIPSTATPFPHRAGNLWKIQYVTNWNEPGTDAANRYLNLTRKLYGYMT------PFVSKNPRQAFFNYRDIDLGINHNGK 358 (403)
Q Consensus 285 ~~~~~~tafp~R~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~Y~Ny~d~~~~~~~~~~ 358 (403)
+++.++||||||+ +.+++++...|.++ +.++...+|++++++.+. |+.+....|+|+||+|.+++..+ ..
T Consensus 409 ~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~-~~ 484 (523)
T 2wdx_A 409 TVDPAATALPQRD-AILKVNYITGWANP--GNEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPDSDLADPG-LN 484 (523)
T ss_dssp GSCTTTSSCCCCS-CSEEEEEEEEESSG--GGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCTTSCCGGGGCTT-TC
T ss_pred cCCCccccccccC-ceEEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHhhhcCCCccCCCCCcceecCCcccccccc-cc
Confidence 9999999999999 78999999999866 346778999999988876 32111135799999998864100 00
Q ss_pred chhHHHhhhhhhccccchHHHHHhhhhcCCCCCccCCCCcCC
Q 015646 359 ASFEEAKAYGIKYFLGNFNRLVKIKTKVDPGNFFRNEQSIPV 400 (403)
Q Consensus 359 ~~~~~~~~~~~~y~G~n~~rL~~iK~kyDP~n~F~~~~~I~p 400 (403)
.+. ..|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 485 ~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 485 TSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 000 138999999999999999999999999999999987
No 7
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=9.4e-58 Score=465.86 Aligned_cols=369 Identities=25% Similarity=0.454 Sum_probs=279.9
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEEe
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLVD 80 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV~ 80 (403)
|++||+|++| ++++|+||||+++++|+++|.+++ ++.+|+|.|++|||||+++|||+|+++++||+++|+|+++|||+
T Consensus 94 l~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~ 171 (503)
T 1zr6_A 94 LDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVL 171 (503)
T ss_dssp CTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEEEEEC
T ss_pred CccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCCCCCcccccccChhheEEEEEEEe
Confidence 6789999999 889999999999999999997765 47789999999999999999999999999999999999999999
Q ss_pred cCccEEe-cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecc-hhhHHHHHHHHHHHHhcCCCCCceE
Q 015646 81 VSGRLLD-RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTL-EQNATEIVYRWQQVASKQLPDDLFV 158 (403)
Q Consensus 81 a~G~~~~-~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~ 158 (403)
+||++++ +.++|+|||||+|||+ |+|||||+++||++|.|+....+.+.+++ .+++.++++.|+++....+|++++.
T Consensus 172 a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 250 (503)
T 1zr6_A 172 ADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSM 250 (503)
T ss_dssp TTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHHHHHHHHTCCTTBCC
T ss_pred cCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHHHHHHhhcCChhHEE
Confidence 9999997 7778999999999999 69999999999999999876666666654 3446678888888865337888877
Q ss_pred EEEEeeecCCCCCCceEEEEEEEEEecChhhHHhhhhccCCcCCC--CcCcceeecHHHHHHhhhccCCCCccccccCCC
Q 015646 159 RLILDVVNGTKSGTKTVRASFLSLFLGDSNRLLSIMNESFPELGL--AQSDCIETSWIRSVLFWTNFQIDDPLNILLNRT 236 (403)
Q Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 236 (403)
.+.+.. + .+.+..+|+|+.++..+.+++++..++. ....+..++|.+.+..+.. +..... ...
T Consensus 251 ~~~~~~------~----~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~p 315 (503)
T 1zr6_A 251 RLEINA------N----ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLY---GADLNI--TYN 315 (503)
T ss_dssp EEEEET------T----EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTSCT---TCCSSC--SSC
T ss_pred EEEEeC------C----eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHHcC---CCcccc--cCC
Confidence 766542 1 4566788999998887777654332332 1234556778764432211 000000 000
Q ss_pred CCCCccceeccccccCCCCHhHHHHHHHHHH-hCC-----CcEEEEEeCCC---ccCCCCCCCCCcccccCceEEEEEEe
Q 015646 237 PPTLTFLKRKSDYVKQPIPKNGLEFIWKRMI-ELE-----TPQMIFNPYGG---KMAEIPSTATPFPHRAGNLWKIQYVT 307 (403)
Q Consensus 237 ~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~-~~~-----~~~~~~~~~Gg---~~~~~~~~~tafp~R~~~~~~~~~~~ 307 (403)
...+..++.++.+..+ ++++.++.+++.+. ..+ .+.+.++++|| ++.+++.++++|+||+ +.+++++..
T Consensus 316 ~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~~ta~~~R~-~~~~~~~~~ 393 (503)
T 1zr6_A 316 YDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRD-QLWLWQFYD 393 (503)
T ss_dssp CCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTTTSSCCCTT-CSEEEEEEE
T ss_pred CCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcccCCccccc-ceeEEEEEe
Confidence 1122346677777765 88899999999887 532 13577899999 8888888999999998 688888866
Q ss_pred Ee-----CCCCchhhHHHHHHHHHHHhcccccccCCCCcccccccCCccCCCCCCCchhHHHhhhhhhccccchHHHHHh
Q 015646 308 NW-----NEPGTDAANRYLNLTRKLYGYMTPFVSKNPRQAFFNYRDIDLGINHNGKASFEEAKAYGIKYFLGNFNRLVKI 382 (403)
Q Consensus 308 ~W-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~y~G~n~~rL~~i 382 (403)
.| .++. .++...+|++++.+.+.........|+|+||+|.+++ ..+|++.|||+||+||++|
T Consensus 394 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~-----------~~~~~~~~yG~n~~RL~~i 460 (503)
T 1zr6_A 394 SIYDYENNTSP--YPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT-----------KEEAQKLYWRGNLEKLQAI 460 (503)
T ss_dssp EETTTTTCCTT--TTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-----------HHHHHHHHHGGGHHHHHHH
T ss_pred eeccccCCCcc--chHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-----------cchHHHHHHHhHHHHHHHH
Confidence 76 2221 2233456666665554433211124799999998753 2379999999999999999
Q ss_pred hhhcCCCCCccCCCCcCCCC
Q 015646 383 KTKVDPGNFFRNEQSIPVLP 402 (403)
Q Consensus 383 K~kyDP~n~F~~~~~I~p~~ 402 (403)
|+||||+|||+++|+|+|..
T Consensus 461 K~kyDP~~vF~~~~~i~~~~ 480 (503)
T 1zr6_A 461 KAKYDPEDVFGNVVSVEPIA 480 (503)
T ss_dssp HHHHCTTCTTCCTTSCCCCC
T ss_pred HHHhCchhhcCCCCCCCchh
Confidence 99999999999999999864
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=2e-57 Score=465.21 Aligned_cols=377 Identities=28% Similarity=0.451 Sum_probs=276.6
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHh-cCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEE
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISE-KSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLV 79 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~-~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV 79 (403)
|++||+|++|+++++|+||||+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|+++|||
T Consensus 109 l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV 186 (530)
T 2y3s_A 109 MSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVV 186 (530)
T ss_dssp CTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEE
T ss_pred cccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEE
Confidence 689999999999999999999999999999985 76 567889999999999999999999999999999999999999
Q ss_pred ec--CccEE--e-cCC-CCc--chhHHhhccCCCCeEEEEEEEEEE------------eecCc-eEEEEEEEecch----
Q 015646 80 DV--SGRLL--D-RKS-MGE--DLFWAIRGGGGASFGVVLAYRIKL------------VRVPE-TVTVFQVRKTLE---- 134 (403)
Q Consensus 80 ~a--~G~~~--~-~~~-~~~--dLfwa~rG~gg~~fGivt~~~~~~------------~p~~~-~~~~~~~~~~~~---- 134 (403)
++ ||+++ + +.+ +|+ |||||+||+|+|+|||||+++||+ +|.|+ .+..+.+.|+..
T Consensus 187 ~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 266 (530)
T 2y3s_A 187 VVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEGLDE 266 (530)
T ss_dssp EECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTTCCH
T ss_pred EecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccccCH
Confidence 95 59974 3 433 555 499999998668999999999999 99876 455566666532
Q ss_pred hhHHHHHHHHHHHHhcC-CCCCc--eEEEEEeeecCCCCCCceEEEEEEEEEecChhhHHhhhhccC---Cc-CC-CCcC
Q 015646 135 QNATEIVYRWQQVASKQ-LPDDL--FVRLILDVVNGTKSGTKTVRASFLSLFLGDSNRLLSIMNESF---PE-LG-LAQS 206 (403)
Q Consensus 135 ~~~~~~~~~~~~~~~~~-~p~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~---~~-~~-~~~~ 206 (403)
+...++++.|+++...+ .|+.. .....+..... ..+ .+.+..+|.|+.++..+.+++++ .. ++ +...
T Consensus 267 ~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~~ 341 (530)
T 2y3s_A 267 AAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS-QSG----ALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHS 341 (530)
T ss_dssp HHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG-GGS----EEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCEE
T ss_pred HHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC-CCC----cEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCccc
Confidence 23456788887776431 34441 22222222210 111 34455678888776665555422 11 22 2234
Q ss_pred cceeecHHHHHHhhhccCCCCccccccCCCCCCCccceeccccccCCCCHhHHHHHHHHHHhC----CCcEEEEEeCCCc
Q 015646 207 DCIETSWIRSVLFWTNFQIDDPLNILLNRTPPTLTFLKRKSDYVKQPIPKNGLEFIWKRMIEL----ETPQMIFNPYGGK 282 (403)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~Gg~ 282 (403)
.+..++|.+....+...+.+ . .. ..++.++.++.+.++++.++.+++.+... +.+.+.++++||+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~--------~--~~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~GGa 410 (530)
T 2y3s_A 342 DTRRLPWLHSTRWPGIAGDG--------D--MT-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYGGK 410 (530)
T ss_dssp EEEEEEHHHHTTCHHHHCCC--------C--CC-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECCGG
T ss_pred eeeeccHHHHHHhhcCCCCC--------c--cc-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecCCc
Confidence 45677888754332211110 0 01 24566777776678889999999988753 2367889999999
Q ss_pred cCCCCCCCCCcccccCceEEEEEEeEeCCCCchhhHHHHHHHHHHHhccc------ccccCCCCcccccccCCccCCCCC
Q 015646 283 MAEIPSTATPFPHRAGNLWKIQYVTNWNEPGTDAANRYLNLTRKLYGYMT------PFVSKNPRQAFFNYRDIDLGINHN 356 (403)
Q Consensus 283 ~~~~~~~~tafp~R~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~Y~Ny~d~~~~~~~~ 356 (403)
+.+++.++||||||+ +.+++++...|.++. .+++..+|++++++.+. |+.+....|+|+||+|.+++.++
T Consensus 411 v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~--~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~- 486 (530)
T 2y3s_A 411 VNAVPADRTAVAQRD-SILKIVYVTTWEDPA--QDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADEE- 486 (530)
T ss_dssp GGGSCTTSSSCCCCS-CSEEEEEEEEECCTT--CHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGCTT-
T ss_pred cccCCCCcCcccccc-cceeEEEEEecCCCc--chHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCccccccc-
Confidence 999999999999999 789999999998763 45678899999988876 32111135899999998865100
Q ss_pred CCchhHHHhhhhhhccccchHHHHHhhhhcCCCCCccCCCCcCCCC
Q 015646 357 GKASFEEAKAYGIKYFLGNFNRLVKIKTKVDPGNFFRNEQSIPVLP 402 (403)
Q Consensus 357 ~~~~~~~~~~~~~~y~G~n~~rL~~iK~kyDP~n~F~~~~~I~p~~ 402 (403)
.+.+. ..|++.|||+||+||++||+||||+|||+++|+|+|++
T Consensus 487 ~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~~ 529 (530)
T 2y3s_A 487 WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVPP 529 (530)
T ss_dssp TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCCC
Confidence 00000 13999999999999999999999999999999999864
No 9
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=9.4e-57 Score=460.01 Aligned_cols=372 Identities=26% Similarity=0.428 Sum_probs=274.2
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHH-hcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEE
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRIS-EKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLV 79 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~-~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV 79 (403)
|++||+|++|++.++|+||+|+++++|+++|. ++| +.+++|.|++|||||+++|||+|+++++||+++|+|+++|||
T Consensus 106 l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV 183 (521)
T 2ipi_A 106 MSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVEVV 183 (521)
T ss_dssp CTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEEEE
T ss_pred cccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCCCccccccccHhhcEEEEEEE
Confidence 68999999999999999999999999999997 675 567899999999999999999999999999999999999999
Q ss_pred ecC--ccEE--e-cCC-CCc--chhHHhhccCCCCeEEEEEEEEEE-----------eecCc-eEEEEEEEecch----h
Q 015646 80 DVS--GRLL--D-RKS-MGE--DLFWAIRGGGGASFGVVLAYRIKL-----------VRVPE-TVTVFQVRKTLE----Q 135 (403)
Q Consensus 80 ~a~--G~~~--~-~~~-~~~--dLfwa~rG~gg~~fGivt~~~~~~-----------~p~~~-~~~~~~~~~~~~----~ 135 (403)
++| |+++ + +.. +|+ |||||+||||+|||||||+++||+ +|.|+ .+..+.+.|+.. +
T Consensus 184 ~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 263 (521)
T 2ipi_A 184 VVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDWSALTEE 263 (521)
T ss_dssp EECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEESTTCCHH
T ss_pred EecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEecccccCHH
Confidence 977 9974 2 322 455 599999998668999999999999 99876 355566666532 2
Q ss_pred hHHHHHHHHHHHHhcC-CCCC----ceEEEEEeeecCCCCCCceEEEEEEEEEecChhhHHhhhhccC---Cc-CC-CCc
Q 015646 136 NATEIVYRWQQVASKQ-LPDD----LFVRLILDVVNGTKSGTKTVRASFLSLFLGDSNRLLSIMNESF---PE-LG-LAQ 205 (403)
Q Consensus 136 ~~~~~~~~~~~~~~~~-~p~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~---~~-~~-~~~ 205 (403)
...++++.|+++.... .|++ +...+.+... ..+ .+.+...|.|+.++..+.+++++ .. ++ +..
T Consensus 264 ~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~---~~~----~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~g~~~~ 336 (521)
T 2ipi_A 264 AFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSR---AAG----QILLDIQIDGGLDGAEALLNDFVAAVNEGTGVEPA 336 (521)
T ss_dssp HHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECT---TSC----EEEEEEEEETTSTTHHHHHHHHHHHHTTTCSSCCE
T ss_pred HHHHHHHHHHHHHHhccCCCccccceEEEEEeccC---CCC----ceEEEEEeccCHHHHHHHHHHHHHHHHhhcCCCcc
Confidence 3457788888776431 3443 3333333211 112 23455668888766665554422 11 22 223
Q ss_pred CcceeecHHHHHHhhhccCCCCccccccCCCCCCCccceeccccccCCCCHhHHHHHHHHHHhCC--CcEEEEEeCCCcc
Q 015646 206 SDCIETSWIRSVLFWTNFQIDDPLNILLNRTPPTLTFLKRKSDYVKQPIPKNGLEFIWKRMIELE--TPQMIFNPYGGKM 283 (403)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~Gg~~ 283 (403)
..+..++|.+....+.... . ...+++.++.++.+.++.+.++++++.+.+.+ .+.+.++++||++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~GG~v 403 (521)
T 2ipi_A 337 VQRSTEPWLRATLANKFDT------------G-GFDRTKSKGAYLRKPWTAAQAATLYRHLSADSQVWGEVSLYSYGGKV 403 (521)
T ss_dssp EEEEEECHHHHHTCCCCCC------------T-TCCEEEEEEEEESSCCCHHHHHHHHHHHHSCCSSEEEEEEEECCGGG
T ss_pred ceeeecCHHHHHHhhcCCC------------C-CCccceeeccccccCCCHHHHHHHHHHHHhCCCCceEEEEEecCCcc
Confidence 4456678887543221100 0 00234556777666788899999999887643 3678899999999
Q ss_pred CCCCCCCCCcccccCceEEEEEEeEeCCCCchhhHHHHHHHHHHHhcccccccC------CCCcccccccCCccCCCCCC
Q 015646 284 AEIPSTATPFPHRAGNLWKIQYVTNWNEPGTDAANRYLNLTRKLYGYMTPFVSK------NPRQAFFNYRDIDLGINHNG 357 (403)
Q Consensus 284 ~~~~~~~tafp~R~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~Y~Ny~d~~~~~~~~~ 357 (403)
.+++.++||||||+ +.+++++...|.++ +.++...+|++++++.+...... ...|+|+||+|.+++..+ .
T Consensus 404 ~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~-~ 479 (521)
T 2ipi_A 404 NSVPETATATAQRD-SIIKVWMSATWMDP--AHDDANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVDLVDER-W 479 (521)
T ss_dssp GGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGCTT-T
T ss_pred cCCCCccccccccc-hhhhcceeEecCCC--CchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCccccccc-c
Confidence 99998999999999 78999999999866 34577899999998888632111 135899999998864100 0
Q ss_pred CchhHHHhhhhhhccccchHHHHHhhhhcCCCCCccCCCCcCCC
Q 015646 358 KASFEEAKAYGIKYFLGNFNRLVKIKTKVDPGNFFRNEQSIPVL 401 (403)
Q Consensus 358 ~~~~~~~~~~~~~y~G~n~~rL~~iK~kyDP~n~F~~~~~I~p~ 401 (403)
..+ ...|++.|||+||+||++||+||||+|||+++|+|+|.
T Consensus 480 ~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 480 NTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 000 01499999999999999999999999999999999985
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=6.2e-55 Score=441.16 Aligned_cols=361 Identities=18% Similarity=0.267 Sum_probs=268.2
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEEe
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLVD 80 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV~ 80 (403)
|++||+|++|+++++|+||||+++++|+++|.++| +.+++|.|++|||+|+++|||+|+++++||+++|+|+++|||+
T Consensus 88 l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~vV~ 165 (459)
T 2bvf_A 88 LRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLVT 165 (459)
T ss_dssp CTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEEEC
T ss_pred CCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEEEc
Confidence 67899999999999999999999999999999885 6788899999999999999999999999999999999999999
Q ss_pred cCccEEe-cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecchhhHH--HHHHHHHHHHhcCCCCCce
Q 015646 81 VSGRLLD-RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTLEQNAT--EIVYRWQQVASKQLPDDLF 157 (403)
Q Consensus 81 a~G~~~~-~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~ 157 (403)
+||++++ +..+|+|||||+||++ |+|||||+++||++|.|+......+.|+.. +.. ++++.|+++... +|+.+.
T Consensus 166 ~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~ 242 (459)
T 2bvf_A 166 ATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDALNE-MADHIY 242 (459)
T ss_dssp TTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHHHH-TTTTCC
T ss_pred CCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHHHh-CcHhhc
Confidence 9999997 6778999999999998 899999999999999976666666666642 344 788888888766 677664
Q ss_pred EEEEEeeecCCCCCCceEEEEEEEEEecChhhHHhhhhccCCcCC-CCcCcceeecHHHHHHhhhccCCCCccccccCCC
Q 015646 158 VRLILDVVNGTKSGTKTVRASFLSLFLGDSNRLLSIMNESFPELG-LAQSDCIETSWIRSVLFWTNFQIDDPLNILLNRT 236 (403)
Q Consensus 158 ~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 236 (403)
..+ .... ...+ ...+.+...|.|+.++..+.++++ .++. .....+..++|.+........ . . ..
T Consensus 243 ~~~-~~~~--~~~~--~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~--~~ 307 (459)
T 2bvf_A 243 PSV-FVGV--DENR--APSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNAEV------G-S--FE 307 (459)
T ss_dssp CEE-EEEE--CTTC--CEEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHHHH------S-C--CC
T ss_pred ccc-ccCc--ccCC--CceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhccccc------c-c--CC
Confidence 333 2111 1122 234566778999987776666553 3333 233445677887644331100 0 0 00
Q ss_pred CCCCcccee-ccccccCCCCHhHHHHHHHHHHhCC-Cc-EEEEEeCCCccCCCCCCCCCcccccCceEEEEEEeEeCCCC
Q 015646 237 PPTLTFLKR-KSDYVKQPIPKNGLEFIWKRMIELE-TP-QMIFNPYGGKMAEIPSTATPFPHRAGNLWKIQYVTNWNEPG 313 (403)
Q Consensus 237 ~~~~~~~~~-~s~~~~~~~~~~~i~~~~~~~~~~~-~~-~~~~~~~Gg~~~~~~~~~tafp~R~~~~~~~~~~~~W~~~~ 313 (403)
... ..+.. ++.++.+.++++.++.+++.+.+.+ .. ...++.+||++.+ .+.|||+||+ +.| +.+...|.++.
T Consensus 308 ~~~-~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~-~~~-~~~~~~w~~~~ 382 (459)
T 2bvf_A 308 DGM-SNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRD-AMG-VLALAEWSGAA 382 (459)
T ss_dssp CSC-EEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCS-SCE-EEEEEEECTTS
T ss_pred CCC-cceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCC-cce-EEEEEEeCCCc
Confidence 011 12222 4555543345566666666554433 22 3344555887776 5679999999 578 88889998764
Q ss_pred chhhHHHHHHHHHHHhcccccccCCCCcccccccCCccCCCCCCCchhHHHhhhhhhccccc-hHHHHHhhhhcCCCCCc
Q 015646 314 TDAANRYLNLTRKLYGYMTPFVSKNPRQAFFNYRDIDLGINHNGKASFEEAKAYGIKYFLGN-FNRLVKIKTKVDPGNFF 392 (403)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~y~G~n-~~rL~~iK~kyDP~n~F 392 (403)
+ .++...+|++++.+.+.++......|+|+||+|.+. .+|...|||+| |+||++||+||||+|+|
T Consensus 383 ~-~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~kyDP~~vF 448 (459)
T 2bvf_A 383 P-GSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKREYDPENRF 448 (459)
T ss_dssp T-TTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHHHHCTTCCC
T ss_pred c-chHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHHHhCccccc
Confidence 1 345678999999999988742112589999999762 27999999987 99999999999999999
Q ss_pred cCCCCcCC
Q 015646 393 RNEQSIPV 400 (403)
Q Consensus 393 ~~~~~I~p 400 (403)
+++|+|+|
T Consensus 449 ~~~~~I~p 456 (459)
T 2bvf_A 449 RHNYNIDP 456 (459)
T ss_dssp CSSSCCCC
T ss_pred CCCCCCCC
Confidence 99999997
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2.5e-32 Score=280.67 Aligned_cols=133 Identities=19% Similarity=0.222 Sum_probs=116.3
Q ss_pred CCCCCee------EEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceec-CCCCCccccccccccCccCccccccCcccccE
Q 015646 1 MFNLHSV------DVDIETETAWVQTGATLGEVYYRISEKSKTHGFP-AGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNI 73 (403)
Q Consensus 1 l~~m~~i------~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~-~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v 73 (403)
|++||+| ++|+++++|+||||+++.+|++++.++|+ ..+ .+.+++++|||++.++|.|..+++||+++|+|
T Consensus 121 l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl--~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v 198 (534)
T 1w1o_A 121 MASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGV--APRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNV 198 (534)
T ss_dssp GGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTE--EESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSE
T ss_pred CccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCC--cccCCCCCCCEEeceeccCCCccccccccccHhhhE
Confidence 4678884 89999999999999999999999999874 343 45557889999999999999999999999999
Q ss_pred eEEEEEecCccEEe-cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecchhh
Q 015646 74 VDAKLVDVSGRLLD-RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTLEQN 136 (403)
Q Consensus 74 ~~~~vV~a~G~~~~-~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~ 136 (403)
+++|||++||++++ +..+|+||||++||++ |+|||||++++|++|.|+....+.+.|...++
T Consensus 199 ~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~ 261 (534)
T 1w1o_A 199 LEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWVRFVYTDFAA 261 (534)
T ss_dssp EEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEEEEEESCHHH
T ss_pred EEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEEEEEeCCHHH
Confidence 99999999999997 6678999999999998 79999999999999999876666666654333
No 12
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.95 E-value=2.4e-28 Score=256.31 Aligned_cols=143 Identities=24% Similarity=0.247 Sum_probs=126.4
Q ss_pred CCCCCee-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEE
Q 015646 1 MFNLHSV-DVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLV 79 (403)
Q Consensus 1 l~~m~~i-~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV 79 (403)
|++||+| +||+++++|+||||+++.+|.++|.++|+.+.+.+++....+|||++.+++.|..+.+||.+.|+|+++|||
T Consensus 260 lsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVV 339 (658)
T 4bby_A 260 TSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVV 339 (658)
T ss_dssp CTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEE
T ss_pred CccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEE
Confidence 6899997 899999999999999999999999999876666678888889999999999999999999999999999999
Q ss_pred ecCccEEe-----cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHH
Q 015646 80 DVSGRLLD-----RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTLEQNATEIVYRW 144 (403)
Q Consensus 80 ~a~G~~~~-----~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (403)
|+||+|++ ..+.++||+|+++|+. |+|||||++++|++|.|+......+.|+..+++.+++..+
T Consensus 340 lpdG~i~~~~~~~k~~aGyDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 340 TPRGVIEKSCQGPRMSTGPDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp ETTEEEECSCCCSSCCSSSCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred eCCCcccccccccccCCCcCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 99999985 2345789999999999 7999999999999999998777777777555555555443
No 13
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.95 E-value=2.2e-26 Score=235.50 Aligned_cols=140 Identities=21% Similarity=0.282 Sum_probs=115.8
Q ss_pred CCCCCeeEEeC-----CC--CEEEEcCCCCHHHHHHH-HHhcCCcceecCCCCCccccccccccCccCccccccCccccc
Q 015646 1 MFNLHSVDVDI-----ET--ETAWVQTGATLGEVYYR-ISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDN 72 (403)
Q Consensus 1 l~~m~~i~~d~-----~~--~~v~v~~G~~~~~v~~~-l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~ 72 (403)
|++||+|+||+ ++ .+|+||||+++.+++++ +.++|+. ....++++.++|||++.++|.|..+.+||.++|+
T Consensus 112 l~~m~~i~i~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~Gl~-~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~ 190 (524)
T 2exr_A 112 MSTTAENHFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLA-PRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSN 190 (524)
T ss_dssp GGGGTTSCEEEEECCSSSSSEEEEEETTCBHHHHHHHHHHHHSEE-CSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGS
T ss_pred CcCCCCcEEeecccCCCCCceEEEEeCCcCHHHHHHHHHHHcCCC-CCCCCcCCceeecccCCCCCCcccccccCcHhhh
Confidence 56899987777 55 89999999999998655 5488743 2234566778999999999999999999999999
Q ss_pred EeEEEEEecCccEEe-cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHH
Q 015646 73 IVDAKLVDVSGRLLD-RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTLEQNATEIVY 142 (403)
Q Consensus 73 v~~~~vV~a~G~~~~-~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 142 (403)
|+++|||++||++++ +..+|+||||++||++ |+|||||++++|++|.|+....+.+.|+..+++.+.+.
T Consensus 191 V~~l~vV~~dG~v~~~~~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~ 260 (524)
T 2exr_A 191 VTELDVVTGNGDVVTCSEIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAE 260 (524)
T ss_dssp EEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHH
T ss_pred EEEEEEEecCCeEEEECCCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHH
Confidence 999999999999996 5567899999999999 89999999999999999977666677765444444333
No 14
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.95 E-value=6.2e-27 Score=236.39 Aligned_cols=145 Identities=22% Similarity=0.324 Sum_probs=125.1
Q ss_pred CCCCCee-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEE
Q 015646 1 MFNLHSV-DVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLV 79 (403)
Q Consensus 1 l~~m~~i-~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV 79 (403)
|++||+| ++|+++++|+||||+++.+|++++.++|+.+.+..+++..++|||++.+++.|..+.+||.++|+|+++|||
T Consensus 102 l~~m~~i~~id~~~~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV 181 (476)
T 3pm9_A 102 LKRMDKIREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVV 181 (476)
T ss_dssp CTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEE
T ss_pred eeCCCceEEEcCCCCeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEE
Confidence 6789998 899999999999999999999999999865455567888889999999999999999999999999999999
Q ss_pred ecCccEEe-c-----CCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHHHH
Q 015646 80 DVSGRLLD-R-----KSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTLEQNATEIVYRWQQ 146 (403)
Q Consensus 80 ~a~G~~~~-~-----~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (403)
++||++++ . ...++||+|+++|++ |+|||||++++|++|.|+......+.|+..+++.+++..+++
T Consensus 182 ~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 182 LADGRVMNLLSKLKKDNTGYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CTTSCEEECCCCCSCCCSSCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred ccCCeEEEcCCcccCCCCCcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 99999995 2 235689999999998 799999999999999998766666677655566666666654
No 15
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.93 E-value=2.3e-24 Score=220.76 Aligned_cols=146 Identities=21% Similarity=0.285 Sum_probs=119.6
Q ss_pred CCCCCee-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceec-CCCCCccccccccccCccCccccccCcccccEeEEEE
Q 015646 1 MFNLHSV-DVDIETETAWVQTGATLGEVYYRISEKSKTHGFP-AGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKL 78 (403)
Q Consensus 1 l~~m~~i-~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~-~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~v 78 (403)
|++||+| ++|+++++|+||||+++.+|+++|.++|+.+... .+....+||||+++++|.|.. +||.++|+|+++||
T Consensus 109 l~~m~~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~ev 186 (520)
T 1wvf_A 109 LKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEV 186 (520)
T ss_dssp CTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEE
T ss_pred CCCCCceEEECCCCCEEEECCCCCHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEE
Confidence 6789998 9999999999999999999999999998654321 123337889999999998886 89999999999999
Q ss_pred EecCccEEe-c--CCCCcchhHHhhccCC---------CCeEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHHHH
Q 015646 79 VDVSGRLLD-R--KSMGEDLFWAIRGGGG---------ASFGVVLAYRIKLVRVPETVTVFQVRKTLEQNATEIVYRWQQ 146 (403)
Q Consensus 79 V~a~G~~~~-~--~~~~~dLfwa~rG~gg---------~~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (403)
|++||++++ + ..+|+|+|++.||+.| ++|||||++++|++|.|+....+.+.|+..+++.++++.+++
T Consensus 187 V~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~ 266 (520)
T 1wvf_A 187 VLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRP 266 (520)
T ss_dssp ECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHH
T ss_pred EcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHH
Confidence 999999996 3 2468899888777753 599999999999999998776677777755566666666665
Q ss_pred HH
Q 015646 147 VA 148 (403)
Q Consensus 147 ~~ 148 (403)
+.
T Consensus 267 ~~ 268 (520)
T 1wvf_A 267 LR 268 (520)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 16
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.93 E-value=4.8e-25 Score=227.51 Aligned_cols=144 Identities=22% Similarity=0.246 Sum_probs=120.0
Q ss_pred CCCCCee-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEE
Q 015646 1 MFNLHSV-DVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLV 79 (403)
Q Consensus 1 l~~m~~i-~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV 79 (403)
|++||+| ++|+++.+|+||||+++.+|+++|.++|+.+...+++...++|||++.++++|..+.+||.++|+|+++|||
T Consensus 191 l~~mn~I~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levV 270 (584)
T 2uuu_A 191 MRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTV 270 (584)
T ss_dssp CTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEE
T ss_pred CCCCCccEEEcCCCCEEEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEE
Confidence 6899998 899999999999999999999999999754433344455678999999999999999999999999999999
Q ss_pred ecCccEEe----cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHHH
Q 015646 80 DVSGRLLD----RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVRKTLEQNATEIVYRWQ 145 (403)
Q Consensus 80 ~a~G~~~~----~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (403)
++||++++ +...++||+|+++|++ |+|||||+++||++|.|+....+.+.|+..+++.+++..+.
T Consensus 271 l~dG~i~~~~~~~~~~g~dl~~~~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 271 TPTGTLELRNGARSGAGINYKHIILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp ETTEEECCC-------CCCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred eCCCCEEECCccccCCCcchhhhhccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 99999885 3446899999999999 79999999999999999876666777765444444444443
No 17
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.93 E-value=3.2e-24 Score=216.74 Aligned_cols=141 Identities=18% Similarity=0.257 Sum_probs=117.8
Q ss_pred CCCCCee-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEE
Q 015646 1 MFNLHSV-DVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLV 79 (403)
Q Consensus 1 l~~m~~i-~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV 79 (403)
|++||+| ++|+++++|+||||+++.+|+++|.++|+.+.+.+|. +.++|||.+.+|++|..++.||..+|+|+++|||
T Consensus 94 l~~l~~i~~~d~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV 172 (481)
T 4feh_A 94 MTPLNTIHSIDADTKLVDIDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLL 172 (481)
T ss_dssp CTTCCCEEEEETTTTEEEEETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEE
T ss_pred CccCCCceEEcCCCCEEEEcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEE
Confidence 6789998 9999999999999999999999999997543332344 5788999999999999999999999999999999
Q ss_pred ecCccEEe-cCC-CCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEE-EEEecchhhHHHHHHHHHH
Q 015646 80 DVSGRLLD-RKS-MGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVF-QVRKTLEQNATEIVYRWQQ 146 (403)
Q Consensus 80 ~a~G~~~~-~~~-~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 146 (403)
++||++++ +.. +|+|||||+||++ |+|||||++++|++|.|+..... ...+ .+..++++.+.+
T Consensus 173 ~~dG~v~~~s~~~~~~dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~~~~~~~~~---~~l~~~~~~~~~ 238 (481)
T 4feh_A 173 TADGEIRHLTPTGEDAELFWATVGGN-GLTGIIMRATIEMTPTSTAYFIADGDVT---ASLDETIALHSD 238 (481)
T ss_dssp CTTSCEEEECSSSTTHHHHHHHTTCT-TTTCEEEEEEEECEECSCSEEEEEEEEC---SSHHHHHHHHSS
T ss_pred eCCCCEEEeCCCCCChHHHHHhhccC-CCceEEEEEEEEEEeCCccEEEEEEEeC---CCHHHHHHHHHH
Confidence 99999997 666 8999999999998 79999999999999998654322 2222 244556666553
No 18
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.92 E-value=1.3e-23 Score=209.98 Aligned_cols=119 Identities=22% Similarity=0.286 Sum_probs=107.4
Q ss_pred CCCCCee-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceec-CCCCCccccccccccCccCccccccCcccccEeEEEE
Q 015646 1 MFNLHSV-DVDIETETAWVQTGATLGEVYYRISEKSKTHGFP-AGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKL 78 (403)
Q Consensus 1 l~~m~~i-~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~-~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~v 78 (403)
|++||+| ++|+++++|+||||+++.+|.++|.++|+. ++ .++++.++|||++.+|++|.. .+||..+|+|+++||
T Consensus 67 l~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~l~~~Gl~--l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~v 143 (422)
T 2vfr_A 67 LAGLPSVVDVDTAARTVRVGGGVRYAELARVVHARGLA--LPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVEL 143 (422)
T ss_dssp STTSCCCEEEETTTTEEEEETTCBHHHHHHHHHHTTEE--CSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEE
T ss_pred hhhCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHHcCCc--ccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEE
Confidence 5789997 999999999999999999999999999754 44 588899999999999999975 799999999999999
Q ss_pred EecCccEEe-cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEE
Q 015646 79 VDVSGRLLD-RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVT 125 (403)
Q Consensus 79 V~a~G~~~~-~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~ 125 (403)
|++||++++ +..+|+ ||+++|++ |++||||++++|++|.|+...
T Consensus 144 v~~~G~~~~~~~~~~~--f~~~~g~~-G~lGvit~~~l~l~p~~~~~~ 188 (422)
T 2vfr_A 144 VTADGSTVVIARGDER--FGGAVTSL-GALGVVTSLTLDLEPAYEMEQ 188 (422)
T ss_dssp ECTTSCEEEEETTSTT--GGGTSSCT-TTTCEEEEEEEECEECCEEEE
T ss_pred EeCCCCEEEeCCCCCC--cceEEecC-CCCEEEEEEEEEEEecCceEE
Confidence 999999997 555666 99999998 799999999999999987543
No 19
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.89 E-value=2.3e-21 Score=199.93 Aligned_cols=146 Identities=16% Similarity=0.120 Sum_probs=117.5
Q ss_pred CCCCCee-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCc--ceecCCCCCccccccccccCccCccccccCcccccEeEEE
Q 015646 1 MFNLHSV-DVDIETETAWVQTGATLGEVYYRISEKSKT--HGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAK 77 (403)
Q Consensus 1 l~~m~~i-~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~--~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~ 77 (403)
-++||+| +||+++++|+||||+++.+|.++|.++|+. +.+.+++....||||++.++|.|+. +||..+|+|+++|
T Consensus 124 ~~~mn~il~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~ 201 (560)
T 1e8g_A 124 GKNMNRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGME 201 (560)
T ss_dssp TTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEE
T ss_pred hHhcCCeEEEcCCCCEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeE
Confidence 0789998 999999999999999999999999999876 5443445446789999999988875 9999999999999
Q ss_pred EEecCccEEe-cC--CCCc---------------chhHHhhccC----------CCCeEEEEEEEEEEeecCceEEEEEE
Q 015646 78 LVDVSGRLLD-RK--SMGE---------------DLFWAIRGGG----------GASFGVVLAYRIKLVRVPETVTVFQV 129 (403)
Q Consensus 78 vV~a~G~~~~-~~--~~~~---------------dLfwa~rG~g----------g~~fGivt~~~~~~~p~~~~~~~~~~ 129 (403)
||++||++++ +. ..++ +++|+++++| +|+|||||++++|++|.|+....+.+
T Consensus 202 vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~ 281 (560)
T 1e8g_A 202 VVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLI 281 (560)
T ss_dssp EEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEE
T ss_pred EEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEE
Confidence 9999999996 32 2331 6677776541 37999999999999999998777777
Q ss_pred EecchhhHHHHHHHHHHHH
Q 015646 130 RKTLEQNATEIVYRWQQVA 148 (403)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~ 148 (403)
.|+..+++.+++..++++.
T Consensus 282 ~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 282 TLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp EECSTTHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHH
Confidence 7876566666666666654
No 20
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.87 E-value=2.4e-22 Score=182.06 Aligned_cols=118 Identities=19% Similarity=0.236 Sum_probs=101.0
Q ss_pred eEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCcccccEeEEEEEecCccEE
Q 015646 7 VDVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGLTVDNIVDAKLVDVSGRLL 86 (403)
Q Consensus 7 i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~ 86 (403)
|+||+++++|+||+|+++.+|+++|.++|+.+...+|+++. +|||++.+|++| ++||.. |+|+++|||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 58999999999999999999999999887543333466776 999999999999 899999 9999999999999999
Q ss_pred e-cC-----CCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEEEEEEE
Q 015646 87 D-RK-----SMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVTVFQVR 130 (403)
Q Consensus 87 ~-~~-----~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~~~~~~ 130 (403)
+ +. ..++||||+++|++ |+|||||+++||++|.|+....+.+.
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 5 32 24589999999998 79999999999999998865544433
No 21
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.79 E-value=7.8e-20 Score=187.55 Aligned_cols=142 Identities=16% Similarity=0.162 Sum_probs=115.8
Q ss_pred CCCCCee-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCccee-cCCCCCccccccccccCccCccccccCcccc-------
Q 015646 1 MFNLHSV-DVDIETETAWVQTGATLGEVYYRISEKSKTHGF-PAGVCPTVGVGGHIGGGGYGNMMRKYGLTVD------- 71 (403)
Q Consensus 1 l~~m~~i-~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~-~~g~~~~vgvgG~~~ggG~g~~s~~~G~~~D------- 71 (403)
|++||+| ++|+ .++|+||||+++.+|+++|.++|+.+.+ ++++|..++|||.+.++++|..+.+||..+|
T Consensus 101 l~rmn~I~~id~-~~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~ 179 (571)
T 1f0x_A 101 TLRLDKLHVLGK-GEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARI 179 (571)
T ss_dssp CTTCCCEEEETT-TTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEE
T ss_pred CcccCCceeECC-CCeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhhee
Confidence 6789998 7994 6899999999999999999999863322 2345666789999999999999999999999
Q ss_pred ---------cEeEEEEEecCccEEe-c-C--------------CCC--c-----------------chhHHh--hccCCC
Q 015646 72 ---------NIVDAKLVDVSGRLLD-R-K--------------SMG--E-----------------DLFWAI--RGGGGA 105 (403)
Q Consensus 72 ---------~v~~~~vV~a~G~~~~-~-~--------------~~~--~-----------------dLfwa~--rG~gg~ 105 (403)
+|+++|||++||++++ + . .++ + ||+|++ +|++ |
T Consensus 180 ~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-G 258 (571)
T 1f0x_A 180 NEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-G 258 (571)
T ss_dssp CTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-T
T ss_pred ccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-C
Confidence 9999999999999985 2 1 123 2 988888 9999 7
Q ss_pred CeEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHHH
Q 015646 106 SFGVVLAYRIKLVRVPETVTVFQVRKTLEQNATEIVYRWQ 145 (403)
Q Consensus 106 ~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (403)
+||| |++++|++|.|+....+.+.++..+++.+++..+.
T Consensus 259 tlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 259 KLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp SSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHH
T ss_pred ceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHH
Confidence 9999 99999999999876666667765555555555554
No 22
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.77 E-value=7.6e-19 Score=180.96 Aligned_cols=119 Identities=12% Similarity=0.132 Sum_probs=98.2
Q ss_pred CCCCeeEEeC--CCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCc---------c-ccccCcc
Q 015646 2 FNLHSVDVDI--ETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGN---------M-MRKYGLT 69 (403)
Q Consensus 2 ~~m~~i~~d~--~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~---------~-s~~~G~~ 69 (403)
++||+|++|+ ++++|+||||+++.+|+++|.++|+.+.+ .+..+.++|||.+.+|++|. + +++||..
T Consensus 92 ~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~-~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~~ 170 (561)
T 2i0k_A 92 THLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWAN-LPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSL 170 (561)
T ss_dssp TTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSS-CCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCG
T ss_pred hhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccc-cCCCCCcccCCCcccCCcccccccCCcccccccccccH
Confidence 6899999999 88999999999999999999999854333 23336678888886655554 4 5679999
Q ss_pred cccEeEEEEEecCcc---EEe-cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceEE
Q 015646 70 VDNIVDAKLVDVSGR---LLD-RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETVT 125 (403)
Q Consensus 70 ~D~v~~~~vV~a~G~---~~~-~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~~ 125 (403)
+|+|+++|||++||+ +++ ++ +|+||+|+++|.| . ||||++++|++|.|+...
T Consensus 171 ~d~V~~~evV~~dG~~~~~~~~~~-~~~dl~~a~~g~G-~--giIt~~tl~l~p~~~~~~ 226 (561)
T 2i0k_A 171 SNLVTELTAVVWNGTTYALETYQR-NDPRITPLLTNLG-R--CFLTSVTMQAGPNFRQRC 226 (561)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEET-TSGGGHHHHSCTT-S--SCEEEEEEECEECCEEEE
T ss_pred hheEEEEEEEeCCCCEEEeeeccC-CCccHHHHHhcCC-C--EEEEEEEEEEEECCceEE
Confidence 999999999999999 665 43 4899999999775 4 899999999999987543
No 23
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.77 E-value=7.9e-19 Score=177.68 Aligned_cols=117 Identities=13% Similarity=0.148 Sum_probs=97.8
Q ss_pred CCCCeeEEeCC--CCEEEEcCCCCHHHHHHHHHhcCCcceec-CCCCCccccccccccCccCcc----------ccccCc
Q 015646 2 FNLHSVDVDIE--TETAWVQTGATLGEVYYRISEKSKTHGFP-AGVCPTVGVGGHIGGGGYGNM----------MRKYGL 68 (403)
Q Consensus 2 ~~m~~i~~d~~--~~~v~v~~G~~~~~v~~~l~~~~~~~~~~-~g~~~~vgvgG~~~ggG~g~~----------s~~~G~ 68 (403)
++||+|++|++ +++|+||||+++.+|+++|.++|+ .++ .+.++.++|||++.+|++|.. +++||+
T Consensus 86 ~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL--~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~ 163 (540)
T 3js8_A 86 RYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAGL--GVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGS 163 (540)
T ss_dssp TTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTTE--ECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSC
T ss_pred CcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcCC--EEEecCCCCCeEEcccccCCCCccccccccccccccccccc
Confidence 36999999985 689999999999999999999875 444 244577899999999888885 689999
Q ss_pred ccccEeEEEEEecCcc-----EEe-cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecCceE
Q 015646 69 TVDNIVDAKLVDVSGR-----LLD-RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVPETV 124 (403)
Q Consensus 69 ~~D~v~~~~vV~a~G~-----~~~-~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~~~~ 124 (403)
.+|+|++++||++||+ +++ +. +|+||||+++|+ |+ ||||+++||++|.+...
T Consensus 164 ~~D~V~~levV~adG~~~~~~i~~~s~-~~~DL~a~r~G~--G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 164 ISNLVLSLTAVVYDKASGAYALRKFAR-NDPQIAPLLAHV--GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp GGGGEEEEEEEEEETTTTEEEEEEEET-TSGGGHHHHTCT--TS-SCEEEEEEEEEECCEEE
T ss_pred HHHhEEEEEEEcCCCCCceeeEEEeCC-CChhHHHHHhcC--CC-eEEEEEEEEEEECCceE
Confidence 9999999999999998 665 44 689996665554 34 69999999999998643
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.54 E-value=6e-15 Score=141.08 Aligned_cols=109 Identities=21% Similarity=0.249 Sum_probs=85.2
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCC-cceecCCCCCccccccccc--cCccCccccccCcccccEeEEE
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISEKSK-THGFPAGVCPTVGVGGHIG--GGGYGNMMRKYGLTVDNIVDAK 77 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~-~~~~~~g~~~~vgvgG~~~--ggG~g~~s~~~G~~~D~v~~~~ 77 (403)
|++||+|++|. .+|+||||++|.+|++++.++|+ ++-...|.+.+ |||.+. .||+| |.++|+|+++|
T Consensus 104 l~~~~~I~~d~--~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~NaGgyG------g~~~d~v~~ve 173 (322)
T 3tx1_A 104 LDLLQTIERNN--TQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGS--IGGALHMNAGAYG------GEISDVLEAAT 173 (322)
T ss_dssp CTTCCCEEEET--TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCEETT------EEHHHHEEEEE
T ss_pred CCCCCcEEECC--CEEEEecCcCHHHHHHHHHHcCCcccccCCCCcch--hHHHHHhCccCcc------cchHhhEEEEE
Confidence 56899998864 59999999999999999999875 22245566555 556665 45544 79999999999
Q ss_pred EEecCccEEe-cCCCCcchhHHhhccC-CCCeEEEEEEEEEEeecCc
Q 015646 78 LVDVSGRLLD-RKSMGEDLFWAIRGGG-GASFGVVLAYRIKLVRVPE 122 (403)
Q Consensus 78 vV~a~G~~~~-~~~~~~dLfwa~rG~g-g~~fGivt~~~~~~~p~~~ 122 (403)
||++||++++ + ++|++|++|++. |+++||||+++||++|.|+
T Consensus 174 vV~~~G~i~~~~---~~~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 174 VLTQTGELKKLK---RSELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp EECTTSCEEEEE---GGGCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred EEcCCCCEEEec---hHHcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 9999999997 4 369999999985 2468999999999999874
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.51 E-value=3.5e-14 Score=137.26 Aligned_cols=111 Identities=15% Similarity=0.122 Sum_probs=94.2
Q ss_pred CCeeEEeC--CCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCc-ccccEeEEEEEe
Q 015646 4 LHSVDVDI--ETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGL-TVDNIVDAKLVD 80 (403)
Q Consensus 4 m~~i~~d~--~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~-~~D~v~~~~vV~ 80 (403)
|++|++++ ++.+|+||+|+.|.+|.+++.++|+ .|....+|+.| ++||+.+...+.||. ++|+|++++||+
T Consensus 81 ~~~i~v~~~~~~~~v~v~AG~~~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~ 154 (357)
T 3i99_A 81 LNGIEHQQDDDYHRLHVAGGEDWPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLC 154 (357)
T ss_dssp CCCEEEEECSSEEEEEEETTSBHHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEE
T ss_pred CCceEEeccCCceEEEEeCCCcHHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEE
Confidence 88888753 5679999999999999999999874 26666677766 788899999999998 899999999999
Q ss_pred c-CccEEecCCCCcchhHHhhccCC----CCeEEEEEEEEEEeecCc
Q 015646 81 V-SGRLLDRKSMGEDLFWAIRGGGG----ASFGVVLAYRIKLVRVPE 122 (403)
Q Consensus 81 a-~G~~~~~~~~~~dLfwa~rG~gg----~~fGivt~~~~~~~p~~~ 122 (403)
+ ||++++-. +.||+|+.|++.. +++||||+++||++|.+.
T Consensus 155 ~~~G~i~~~~--~~dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 155 LETGTVKRLT--MEECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TTTTEEEEEE--TGGGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CCCCcEEEEe--HHHcCcccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 9 99999721 4699999999862 379999999999999764
No 26
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.46 E-value=4.3e-14 Score=135.83 Aligned_cols=106 Identities=22% Similarity=0.239 Sum_probs=83.1
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCC-cceecCCCCCccccccccccCccCccccccC-cccccEeEEEE
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISEKSK-THGFPAGVCPTVGVGGHIGGGGYGNMMRKYG-LTVDNIVDAKL 78 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~-~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G-~~~D~v~~~~v 78 (403)
|++||+|++|. ++++||||+++.+|++++.++|+ ++....+... +|||.+..+..| || .++|+|++++|
T Consensus 98 l~~m~~i~id~--~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~v 168 (326)
T 1hsk_A 98 LLSLDHIEVSD--DAIIAGSGAAIIDVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALC 168 (326)
T ss_dssp CTTCCCEEEET--TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEE
T ss_pred eCCCCceEEcC--CEEEEeCCCcHHHHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEE
Confidence 57899999974 79999999999999999999875 1111223222 477887755444 88 99999999999
Q ss_pred EecCccEEe-cCCCCcchhHHhhccC---CCCeEEEEEEEEEEeec
Q 015646 79 VDVSGRLLD-RKSMGEDLFWAIRGGG---GASFGVVLAYRIKLVRV 120 (403)
Q Consensus 79 V~a~G~~~~-~~~~~~dLfwa~rG~g---g~~fGivt~~~~~~~p~ 120 (403)
|++||++++ +. .|++|+.|+.. .| ||||+++||++|.
T Consensus 169 v~~~G~i~~~~~---~~~~~gyr~~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 169 VNEQGSLIKLTT---KELELDYRNSIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp ECTTSCEEEEET---TTTTCBTTBCHHHHTT--CEEEEEEEECEEC
T ss_pred EeCCCCEEEECh---HHcCCCccccccCCCC--EEEEEEEEEEEcC
Confidence 999999996 32 37889888732 13 9999999999998
No 27
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.41 E-value=6.6e-13 Score=127.90 Aligned_cols=110 Identities=12% Similarity=0.105 Sum_probs=93.2
Q ss_pred CCeeE-EeCCC-CEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccCc-ccccEeEEEEEe
Q 015646 4 LHSVD-VDIET-ETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYGL-TVDNIVDAKLVD 80 (403)
Q Consensus 4 m~~i~-~d~~~-~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G~-~~D~v~~~~vV~ 80 (403)
|++|+ ++.+. .+++||+|++|.+|.+++.++|+ .|-...+|+.| ++||+.....+.||. ++|+|++++||+
T Consensus 65 ~~~i~~i~~~~~~~v~vgAG~~~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~ 138 (340)
T 1uxy_A 65 IKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVE 138 (340)
T ss_dssp CCCEEEEECSSEEEEEEETTSBHHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEE
T ss_pred CCCcEEEecCCCeEEEEecCCCHHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEE
Confidence 78885 66666 69999999999999999999874 35566677766 889999999999996 899999999999
Q ss_pred c-CccEEe-cCCCCcchhHHhhccC----CCCeEEEEEEEEEEeecCc
Q 015646 81 V-SGRLLD-RKSMGEDLFWAIRGGG----GASFGVVLAYRIKLVRVPE 122 (403)
Q Consensus 81 a-~G~~~~-~~~~~~dLfwa~rG~g----g~~fGivt~~~~~~~p~~~ 122 (403)
+ +|++++ + +.|++|+.|++. ++++||||+++||++|.+.
T Consensus 139 ~~~G~v~~~~---~~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 139 LATGKQVRLT---AKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp TTTTEEEEEE---TGGGTCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CCCCcEEEEe---HHHhccccCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 6 999997 4 369999999974 1369999999999999864
No 28
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.37 E-value=2e-13 Score=127.06 Aligned_cols=106 Identities=19% Similarity=0.201 Sum_probs=88.5
Q ss_pred CCCCCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCccccccccccCccCccccccC-cccccEeEEEEE
Q 015646 1 MFNLHSVDVDIETETAWVQTGATLGEVYYRISEKSKTHGFPAGVCPTVGVGGHIGGGGYGNMMRKYG-LTVDNIVDAKLV 79 (403)
Q Consensus 1 l~~m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggG~g~~s~~~G-~~~D~v~~~~vV 79 (403)
|++|++|++|. +||||++|.+|.+++.++|+ .|.+..+|+.| ++||+.....+.|| .++|+|+++|||
T Consensus 66 l~~~~~I~vd~-----~v~aG~~~~~l~~~~~~~Gl-----~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv 134 (268)
T 2gqt_A 66 AGEFQTYDLKG-----WVGAGTLLPLLVQEAARAGL-----SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF 134 (268)
T ss_dssp CGGGGCBCTTS-----EEETTSBHHHHHHHHHHTTE-----ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE
T ss_pred cCCCCCcEEcC-----EEECCCCHHHHHHHHHHcCC-----cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE
Confidence 45688888762 99999999999999999863 26667778876 88999999999999 699999999999
Q ss_pred ecCccEEe-cCCCCcchhHHhhccCCCCeEEEEEEEEEEeecC
Q 015646 80 DVSGRLLD-RKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRVP 121 (403)
Q Consensus 80 ~a~G~~~~-~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~~ 121 (403)
+||++++ + +.|++|+.|++.-..=||||+++||++|.+
T Consensus 135 -~~G~v~~~~---~~~l~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 135 -HDGAFHVYC---PEELGFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp -ETTEEEEEC---GGGSCCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred -CCCcEEEEc---hHHcccccCCCCcCCCceEEEEEEEEEeCC
Confidence 9999997 4 368999999986111149999999999984
No 29
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=90.05 E-value=0.4 Score=48.90 Aligned_cols=54 Identities=11% Similarity=0.098 Sum_probs=37.5
Q ss_pred HHHHHHhcccccccCCCCcccccccCCccCCCCCCCchhHHHhhhhhhccccchHHHHHhhhhcCCCCCccCCCCcCCC
Q 015646 323 LTRKLYGYMTPFVSKNPRQAFFNYRDIDLGINHNGKASFEEAKAYGIKYFLGNFNRLVKIKTKVDPGNFFRNEQSIPVL 401 (403)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~y~G~n~~rL~~iK~kyDP~n~F~~~~~I~p~ 401 (403)
..+.+.+.+..+ +|+|..++.... . |++... |++||+.+||.|+|+....+.|.
T Consensus 510 i~~~~~~~v~~~-----GGsisaEHGvG~--------------~-----~~~~~~-m~~iK~~~DP~~ilNPGk~~t~~ 563 (571)
T 1f0x_A 510 LKEQMLELLQQR-----GAQYPAEHNVGH--------------L-----YKAPET-LQKFYRENDPTNSMNPGIGKTSK 563 (571)
T ss_dssp HHHHHHHHHHHT-----TCBSCSSSCCTT--------------T-----SCCCHH-HHHHHHHHCTTCCBSTTTTTCCC
T ss_pred HHHHHHHHHHHc-----CCeEEeeccCCc--------------c-----cCCHHH-HHHHHHHhCCCCCCCCCcCcCCc
Confidence 333444444444 688887765431 1 455555 99999999999999999888774
No 30
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=79.94 E-value=1.8 Score=39.86 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=59.5
Q ss_pred CCCeeEEeCCCCEEEEcCCCCHHHHHH--HHHhcCCc-ce--ec-CCCCC---ccccccccccCccCccccccCcccccE
Q 015646 3 NLHSVDVDIETETAWVQTGATLGEVYY--RISEKSKT-HG--FP-AGVCP---TVGVGGHIGGGGYGNMMRKYGLTVDNI 73 (403)
Q Consensus 3 ~m~~i~~d~~~~~v~v~~G~~~~~v~~--~l~~~~~~-~~--~~-~g~~~---~vgvgG~~~ggG~g~~s~~~G~~~D~v 73 (403)
.|+.|+++ .+.++||+|+++.++.+ .+.+ ++. +. +- .++.+ ..+|||.+..+-- ..|.+
T Consensus 59 eL~~i~~~--~~~l~iGA~~tl~~l~~~~~~~~-~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~ 126 (287)
T 1ffv_C 59 ELRGIREE--GSTVVIGAMTVENDLISSPIVQA-RLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHP 126 (287)
T ss_dssp GGCCEEEE--TTEEEEETTCBHHHHHHCHHHHH-HCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHH
T ss_pred hhcceEec--CCEEEEccCCcHHHHhhChHHHH-HhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHH
Confidence 46677764 44799999999999985 3433 221 11 00 12221 3468899887631 45655
Q ss_pred e-------EEEEEecCccEEecCCCCcchhHHhhccCCCCeEEEEEEEEEEeec
Q 015646 74 V-------DAKLVDVSGRLLDRKSMGEDLFWAIRGGGGASFGVVLAYRIKLVRV 120 (403)
Q Consensus 74 ~-------~~~vV~a~G~~~~~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p~ 120 (403)
. .+++..++|+..-. -.|+|...|-..=..=-|||++++...+.
T Consensus 127 ~~l~Al~A~v~~~~~~G~r~i~---~~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 127 ALSIAVEAHFVLEGPNGRRTVP---ADGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp HHHHHTTCEEEEEETTEEEEEE---STTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred HHHHHcCcEEEEEcCCceEEEE---HHHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 4 58888899932212 23666654311000114899999987653
No 31
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=56.79 E-value=4.6 Score=40.97 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=21.0
Q ss_pred cchHHHHHhhhhcCCCCCccCCC
Q 015646 374 GNFNRLVKIKTKVDPGNFFRNEQ 396 (403)
Q Consensus 374 ~n~~rL~~iK~kyDP~n~F~~~~ 396 (403)
.++++.+++++++||+++|.+.+
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~~ 555 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNGF 555 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCHH
T ss_pred CCHHHHHHHHHhcCCCCccCCHH
Confidence 89999999999999999998753
No 32
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.42 E-value=48 Score=24.44 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=28.7
Q ss_pred CCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcc
Q 015646 4 LHSVDVDIETETAWVQTGATLGEVYYRISEKSKTH 38 (403)
Q Consensus 4 m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~ 38 (403)
...+++|...+.++|..-+...+|.+++...|+..
T Consensus 46 V~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 80 (98)
T 2crl_A 46 VQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQA 80 (98)
T ss_dssp CCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCE
T ss_pred ceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCce
Confidence 34568899999999987788899999998887653
No 33
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=44.70 E-value=8.6 Score=35.30 Aligned_cols=101 Identities=15% Similarity=0.036 Sum_probs=55.2
Q ss_pred CCeeEEeCCCCEEEEcCCCCHHHHHH--HHHhcCCcce--ecCCCCC----ccccccccccCccCccccccCcccccEe-
Q 015646 4 LHSVDVDIETETAWVQTGATLGEVYY--RISEKSKTHG--FPAGVCP----TVGVGGHIGGGGYGNMMRKYGLTVDNIV- 74 (403)
Q Consensus 4 m~~i~~d~~~~~v~v~~G~~~~~v~~--~l~~~~~~~~--~~~g~~~----~vgvgG~~~ggG~g~~s~~~G~~~D~v~- 74 (403)
|+.|+. +.+.++||+++++.++.+ .+.++-..+. +..-..+ ..+|||.+..+. -..|.+.
T Consensus 60 L~~I~~--~~~~l~IGA~~t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~ 128 (288)
T 1n62_C 60 LVGIRE--EGTDVVIGAMTTQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPAL 128 (288)
T ss_dssp GSCEEE--ETTEEEEETTCBHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHH
T ss_pred hcceEe--cCCEEEEccCCcHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHH
Confidence 566765 345799999999999984 4543211111 0011112 236899988772 2456554
Q ss_pred ------EEEEEecCccEEecCCCCcchhHHhhc-cCCCCeEEEEEEEEEEee
Q 015646 75 ------DAKLVDVSGRLLDRKSMGEDLFWAIRG-GGGASFGVVLAYRIKLVR 119 (403)
Q Consensus 75 ------~~~vV~a~G~~~~~~~~~~dLfwa~rG-~gg~~fGivt~~~~~~~p 119 (403)
.+++..++|+..-.- .|+|...+- .- ..=-|||++.+...+
T Consensus 129 L~Al~A~v~l~~~~G~r~v~~---~df~~g~~~t~l-~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 129 MQCLGAAYELTGPEGARIVAA---RDYYQGAYFTAI-EPGELLTAIRIPVPP 176 (288)
T ss_dssp HHHHTCEEEEEETTEEEEEEH---HHHEEETTEESC-CTTCEEEEEEEECCC
T ss_pred HHHhCcEEEEEeCCccEEEEH---HHHhcCcccccC-CCCCEEEEEEeCCCC
Confidence 566777888422111 255543210 00 011588999887654
No 34
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=42.19 E-value=8.5 Score=38.72 Aligned_cols=23 Identities=17% Similarity=0.277 Sum_probs=21.1
Q ss_pred ccchHHHHHhhhhcCCCCCccCC
Q 015646 373 LGNFNRLVKIKTKVDPGNFFRNE 395 (403)
Q Consensus 373 G~n~~rL~~iK~kyDP~n~F~~~ 395 (403)
|++++..+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 35
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=31.22 E-value=17 Score=35.70 Aligned_cols=104 Identities=14% Similarity=0.092 Sum_probs=58.5
Q ss_pred CCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcce---ecCCCCC----ccccccccccCccCccccccCcccccEe--
Q 015646 4 LHSVDVDIETETAWVQTGATLGEVYYRISEKSKTHG---FPAGVCP----TVGVGGHIGGGGYGNMMRKYGLTVDNIV-- 74 (403)
Q Consensus 4 m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~~~---~~~g~~~----~vgvgG~~~ggG~g~~s~~~G~~~D~v~-- 74 (403)
|+.|+.+ .+.++||+++++.+|.+.+.+ .+... +-....+ ..+|||.+..+-. .+=...-++
T Consensus 231 L~~I~~~--~~~l~IGA~vtl~~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~AL 301 (462)
T 2w3s_A 231 LAQIRET--PDGYGIGAGVTIAALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAM 301 (462)
T ss_dssp GSCEEEE--TTEEEEETTCBHHHHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHT
T ss_pred hCcEEEc--CCEEEEccCCcHHHHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHc
Confidence 6777765 447999999999999987543 22110 0111112 2468999988652 233334455
Q ss_pred --EEEEEecCccEEecCCCCcchhHHhhccCCCCeEEEEEEEEEEee
Q 015646 75 --DAKLVDVSGRLLDRKSMGEDLFWAIRGGGGASFGVVLAYRIKLVR 119 (403)
Q Consensus 75 --~~~vV~a~G~~~~~~~~~~dLfwa~rG~gg~~fGivt~~~~~~~p 119 (403)
.+++..++|+..-. -.|+|...|---=..=-|||++++...+
T Consensus 302 dA~v~l~~~~G~R~vp---~~dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 302 GASLTLRRGQERRRMP---LEDFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp TCEEEEEBTTBCCCCB---GGGGEEETTEESCCTTCEEEEEEEESCC
T ss_pred CCEEEEEeCCceEEEE---HHHhhcccccccCCCCcEEEEEEEecCC
Confidence 66777788832211 2366654321000001489999886654
No 36
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=23.10 E-value=1.2e+02 Score=19.77 Aligned_cols=32 Identities=19% Similarity=0.090 Sum_probs=26.2
Q ss_pred eeEEeCCCCEEEEc--CCCCHHHHHHHHHhcCCc
Q 015646 6 SVDVDIETETAWVQ--TGATLGEVYYRISEKSKT 37 (403)
Q Consensus 6 ~i~~d~~~~~v~v~--~G~~~~~v~~~l~~~~~~ 37 (403)
.+++|..++.++|. ..+...++.+++.+.|+.
T Consensus 32 ~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~ 65 (69)
T 4a4j_A 32 SCQVNFALEQAVVSYHGETTPQILTDAVERAGYH 65 (69)
T ss_dssp EEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCE
T ss_pred EEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCc
Confidence 45788888888888 778889999999887753
No 37
>3owt_C Regulatory protein SIR3; RCT domain, protein binding; 2.00A {Saccharomyces cerevisiae}
Probab=22.65 E-value=33 Score=18.56 Aligned_cols=13 Identities=38% Similarity=0.616 Sum_probs=10.7
Q ss_pred chHHHHHhhhhcC
Q 015646 375 NFNRLVKIKTKVD 387 (403)
Q Consensus 375 n~~rL~~iK~kyD 387 (403)
.++.|.++|+||-
T Consensus 10 dfatlsklkkkyq 22 (27)
T 3owt_C 10 DFATLSKLKKKYQ 22 (27)
T ss_pred ehHHHHHHHhhhe
Confidence 4788999999983
No 38
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=21.71 E-value=1.4e+02 Score=19.59 Aligned_cols=32 Identities=13% Similarity=0.349 Sum_probs=27.6
Q ss_pred eeEEeCCCCEEEEcCCCCHHHHHHHHHhcCCc
Q 015646 6 SVDVDIETETAWVQTGATLGEVYYRISEKSKT 37 (403)
Q Consensus 6 ~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~~ 37 (403)
.+++|..++.++|..-+...++.+++.+.|+.
T Consensus 30 ~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~ 61 (68)
T 3iwl_A 30 KYDIDLPNKKVCIESEHSMDTLLATLKKTGKT 61 (68)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTCSC
T ss_pred EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCc
Confidence 46788999999999888899999999988764
No 39
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=21.31 E-value=1.5e+02 Score=18.46 Aligned_cols=33 Identities=12% Similarity=0.156 Sum_probs=25.9
Q ss_pred CCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCC
Q 015646 4 LHSVDVDIETETAWVQTGATLGEVYYRISEKSK 36 (403)
Q Consensus 4 m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~ 36 (403)
...+++|...+.++|...+...++.+++...|+
T Consensus 29 v~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~ 61 (64)
T 2xmm_A 29 QATVQVDLTSKKVTITSALGEEQLRTAIASAGY 61 (64)
T ss_dssp TCEEEECTTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred cEEEEEEecCCEEEEEecCCHHHHHHHHHHcCC
Confidence 445788888999999877777888888877664
No 40
>2dt7_A Splicing factor 3A subunit 3; structure genomics, SF3A120, SF3A60, SURP domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.50 E-value=37 Score=20.85 Aligned_cols=13 Identities=38% Similarity=0.393 Sum_probs=10.0
Q ss_pred cchHHHHHhhhhc
Q 015646 374 GNFNRLVKIKTKV 386 (403)
Q Consensus 374 ~n~~rL~~iK~ky 386 (403)
+-|.||++||.-+
T Consensus 14 ~FY~rlk~Ike~H 26 (38)
T 2dt7_A 14 EFYNRLKQIKEFH 26 (38)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3499999999743
No 41
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=20.41 E-value=1.8e+02 Score=18.56 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=25.6
Q ss_pred CCeeEEeCCCCEEEEcCCCCHHHHHHHHHhcCC
Q 015646 4 LHSVDVDIETETAWVQTGATLGEVYYRISEKSK 36 (403)
Q Consensus 4 m~~i~~d~~~~~v~v~~G~~~~~v~~~l~~~~~ 36 (403)
...+++|...+.++|.+.+...++.+++...|+
T Consensus 28 v~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy 60 (66)
T 2roe_A 28 VEKVEVSLEKGEALVEGTADPKALVQAVEEEGY 60 (66)
T ss_dssp CCCEEECSSSCBEEECSCCCHHHHHHHHHTTTC
T ss_pred eEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCC
Confidence 345688888999999666677888888887765
No 42
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=20.21 E-value=34 Score=26.41 Aligned_cols=16 Identities=25% Similarity=0.482 Sum_probs=12.9
Q ss_pred HHHHhhhhcCCCCCcc
Q 015646 378 RLVKIKTKVDPGNFFR 393 (403)
Q Consensus 378 rL~~iK~kyDP~n~F~ 393 (403)
--.+|++||||++-+.
T Consensus 82 ~W~~L~~KyDP~g~y~ 97 (109)
T 2gvs_A 82 VWAQLKAKYDPDGTYS 97 (109)
T ss_dssp HHHHHHHHHCTTCTTT
T ss_pred HHHHHHHHHCCCchHH
Confidence 3467899999999775
Done!