Query 015647
Match_columns 403
No_of_seqs 330 out of 2530
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 16:14:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015647.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015647hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 2.5E-68 8.6E-73 545.1 16.2 271 123-394 25-313 (490)
2 2a7v_A Serine hydroxymethyltra 100.0 1.7E-48 5.6E-53 406.4 14.7 269 126-395 28-314 (490)
3 1rv3_A Serine hydroxymethyltra 100.0 3.2E-42 1.1E-46 356.4 19.7 255 124-379 17-271 (483)
4 3h7f_A Serine hydroxymethyltra 100.0 2.3E-34 7.7E-39 293.6 17.5 255 130-394 24-280 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 6.2E-32 2.1E-36 268.9 19.7 236 132-378 6-241 (417)
6 3gbx_A Serine hydroxymethyltra 100.0 1.9E-30 6.5E-35 258.0 17.5 236 132-378 11-246 (420)
7 3ecd_A Serine hydroxymethyltra 100.0 6.3E-30 2.2E-34 254.6 17.3 241 129-379 10-250 (425)
8 2vi8_A Serine hydroxymethyltra 100.0 4.2E-28 1.4E-32 240.3 19.4 238 132-379 4-241 (405)
9 2dkj_A Serine hydroxymethyltra 100.0 9.8E-28 3.4E-32 237.8 20.6 236 133-378 5-240 (407)
10 3hvy_A Cystathionine beta-lyas 99.9 3.5E-22 1.2E-26 204.6 19.0 223 134-379 15-262 (427)
11 3i16_A Aluminum resistance pro 99.9 2.3E-21 8E-26 198.5 18.6 242 117-379 3-262 (427)
12 3jzl_A Putative cystathionine 99.8 9.9E-20 3.4E-24 185.3 18.5 224 137-379 6-245 (409)
13 4hvk_A Probable cysteine desul 99.8 1.1E-19 3.7E-24 176.8 17.0 205 158-386 7-221 (382)
14 3zrp_A Serine-pyruvate aminotr 99.8 1.2E-19 4.1E-24 177.3 16.0 196 153-379 3-205 (384)
15 3ht4_A Aluminum resistance pro 99.8 2.4E-19 8.2E-24 183.5 17.5 231 132-379 7-251 (431)
16 3nnk_A Ureidoglycine-glyoxylat 99.8 2E-19 6.8E-24 177.9 15.2 201 152-379 13-216 (411)
17 3vax_A Putative uncharacterize 99.8 3E-19 1E-23 176.3 16.1 201 157-378 26-235 (400)
18 4eb5_A Probable cysteine desul 99.8 5.7E-19 2E-23 172.7 17.7 203 158-384 7-219 (382)
19 3isl_A Purine catabolism prote 99.8 4.5E-19 1.5E-23 175.7 17.0 200 152-379 11-214 (416)
20 3hbx_A GAD 1, glutamate decarb 99.8 2.4E-18 8.2E-23 178.6 21.6 225 137-380 40-294 (502)
21 1eg5_A Aminotransferase; PLP-d 99.8 2.6E-18 8.9E-23 167.8 20.2 203 158-380 8-219 (384)
22 3cai_A Possible aminotransfera 99.8 9.4E-19 3.2E-23 173.4 17.2 202 158-379 33-242 (406)
23 3qm2_A Phosphoserine aminotran 99.8 1.7E-20 5.7E-25 189.8 3.4 199 153-379 28-237 (386)
24 1b9h_A AHBA synthase, protein 99.8 1.5E-18 5.1E-23 171.5 17.1 189 162-379 14-203 (388)
25 2huf_A Alanine glyoxylate amin 99.8 6.4E-19 2.2E-23 173.6 14.4 200 152-379 19-222 (393)
26 3lvm_A Cysteine desulfurase; s 99.8 3.3E-18 1.1E-22 170.3 18.9 201 158-379 29-240 (423)
27 2dr1_A PH1308 protein, 386AA l 99.8 2.5E-18 8.4E-23 168.4 17.6 196 154-379 22-224 (386)
28 1iug_A Putative aspartate amin 99.8 8E-19 2.7E-23 169.8 13.6 192 154-379 3-201 (352)
29 3f0h_A Aminotransferase; RER07 99.8 1E-18 3.5E-23 171.1 14.1 204 146-379 13-222 (376)
30 3f9t_A TDC, L-tyrosine decarbo 99.8 1.8E-17 6.2E-22 161.9 22.8 221 137-379 13-262 (397)
31 3dr4_A Putative perosamine syn 99.8 1.6E-18 5.4E-23 171.7 15.2 194 154-379 25-221 (391)
32 2z9v_A Aspartate aminotransfer 99.8 2.6E-18 8.8E-23 169.2 16.3 193 157-379 14-212 (392)
33 3e77_A Phosphoserine aminotran 99.8 2.8E-19 9.5E-24 180.5 9.4 195 156-379 17-222 (377)
34 3m5u_A Phosphoserine aminotran 99.8 3.7E-19 1.3E-23 178.4 10.3 196 152-379 5-209 (361)
35 1kmj_A Selenocysteine lyase; p 99.8 4.8E-18 1.6E-22 167.2 18.0 199 160-379 32-241 (406)
36 3kgw_A Alanine-glyoxylate amin 99.8 1.3E-18 4.5E-23 170.4 13.8 201 151-379 22-226 (393)
37 3frk_A QDTB; aminotransferase, 99.8 1.4E-18 4.7E-23 171.1 13.8 190 156-379 8-202 (373)
38 2bkw_A Alanine-glyoxylate amin 99.8 4.2E-18 1.4E-22 166.7 16.4 199 151-379 4-217 (385)
39 1vjo_A Alanine--glyoxylate ami 99.8 2.2E-18 7.5E-23 170.0 14.4 198 153-379 35-237 (393)
40 3ju7_A Putative PLP-dependent 99.8 3.2E-18 1.1E-22 171.2 15.4 187 163-379 14-206 (377)
41 2fq6_A Cystathionine beta-lyas 99.8 5.5E-18 1.9E-22 172.4 17.1 196 153-379 45-248 (415)
42 2ch1_A 3-hydroxykynurenine tra 99.8 2.9E-18 1E-22 169.0 14.5 197 152-378 18-220 (396)
43 3vp6_A Glutamate decarboxylase 99.8 1E-17 3.5E-22 174.4 19.2 178 191-380 129-333 (511)
44 2yrr_A Aminotransferase, class 99.8 2E-18 6.8E-23 166.4 12.9 193 154-379 2-202 (353)
45 3nyt_A Aminotransferase WBPE; 99.8 2.2E-18 7.5E-23 169.8 13.5 193 154-379 5-201 (367)
46 1m32_A 2-aminoethylphosphonate 99.8 2E-18 6.9E-23 167.2 12.9 197 153-379 5-209 (366)
47 2jis_A Cysteine sulfinic acid 99.8 2.7E-17 9.1E-22 170.7 21.3 176 191-379 142-343 (515)
48 1o69_A Aminotransferase; struc 99.8 2E-17 6.9E-22 164.8 19.4 189 160-378 7-198 (394)
49 2dgk_A GAD-beta, GADB, glutama 99.8 4.3E-17 1.5E-21 165.7 21.4 221 137-379 26-278 (452)
50 3a9z_A Selenocysteine lyase; P 99.8 1.2E-17 4.2E-22 167.2 17.1 206 159-380 26-262 (432)
51 3b8x_A WBDK, pyridoxamine 5-ph 99.8 3.1E-17 1.1E-21 162.6 19.1 188 158-379 8-205 (390)
52 4e1o_A HDC, histidine decarbox 99.7 2.2E-17 7.4E-22 170.3 17.7 178 190-379 111-325 (481)
53 3tqx_A 2-amino-3-ketobutyrate 99.7 1.9E-17 6.4E-22 163.1 16.4 199 153-379 45-260 (399)
54 3k40_A Aromatic-L-amino-acid d 99.7 1.7E-17 5.9E-22 171.0 16.7 178 190-380 106-319 (475)
55 2w8t_A SPT, serine palmitoyltr 99.7 6.8E-17 2.3E-21 162.9 20.6 189 163-379 79-278 (427)
56 2okj_A Glutamate decarboxylase 99.7 2.3E-17 7.7E-22 170.4 17.4 175 193-380 128-330 (504)
57 2c81_A Glutamine-2-deoxy-scyll 99.7 3.4E-17 1.2E-21 164.1 18.0 196 158-378 9-206 (418)
58 2fnu_A Aminotransferase; prote 99.7 3.4E-17 1.1E-21 160.0 17.5 184 159-376 7-194 (375)
59 2e7j_A SEP-tRNA:Cys-tRNA synth 99.7 1.2E-17 4.2E-22 162.8 14.2 197 159-379 17-225 (371)
60 1gc0_A Methionine gamma-lyase; 99.7 2E-17 7E-22 165.4 16.0 196 152-379 28-229 (398)
61 1mdo_A ARNB aminotransferase; 99.7 2.7E-17 9.3E-22 162.2 16.6 184 161-378 16-202 (393)
62 2qma_A Diaminobutyrate-pyruvat 99.7 5.1E-17 1.7E-21 167.5 19.0 203 161-382 110-344 (497)
63 1t3i_A Probable cysteine desul 99.7 6.2E-17 2.1E-21 160.2 18.5 207 154-379 30-246 (420)
64 2ctz_A O-acetyl-L-homoserine s 99.7 5.6E-17 1.9E-21 164.2 17.3 193 153-377 22-222 (421)
65 3uwc_A Nucleotide-sugar aminot 99.7 3.9E-17 1.3E-21 160.0 15.5 190 154-379 9-203 (374)
66 3ke3_A Putative serine-pyruvat 99.7 2.6E-17 8.9E-22 163.4 13.9 191 163-379 9-215 (379)
67 1elu_A L-cysteine/L-cystine C- 99.7 4E-17 1.4E-21 160.0 14.2 202 160-379 25-236 (390)
68 1bs0_A Protein (8-amino-7-oxon 99.7 1.3E-16 4.6E-21 157.0 17.8 200 152-379 40-250 (384)
69 1qgn_A Protein (cystathionine 99.7 1.4E-16 4.8E-21 163.7 18.7 194 154-379 79-279 (445)
70 2oga_A Transaminase; PLP-depen 99.7 7.4E-17 2.5E-21 160.8 16.1 194 152-379 31-229 (399)
71 1fc4_A 2-amino-3-ketobutyrate 99.7 1.1E-16 3.7E-21 158.6 16.6 200 152-379 46-262 (401)
72 3ffr_A Phosphoserine aminotran 99.7 5.2E-17 1.8E-21 157.3 14.1 200 152-379 4-207 (362)
73 2z67_A O-phosphoseryl-tRNA(SEC 99.7 2.1E-17 7.2E-22 169.0 11.7 225 137-379 66-314 (456)
74 3kki_A CAI-1 autoinducer synth 99.7 1.7E-16 5.7E-21 158.3 17.8 195 157-379 64-270 (409)
75 3mc6_A Sphingosine-1-phosphate 99.7 6.1E-17 2.1E-21 166.2 14.4 199 164-379 77-296 (497)
76 1js3_A DDC;, DOPA decarboxylas 99.7 1.6E-16 5.5E-21 163.0 17.3 196 164-379 87-319 (486)
77 3ri6_A O-acetylhomoserine sulf 99.7 8.9E-17 3E-21 164.3 15.0 168 182-379 73-246 (430)
78 3ndn_A O-succinylhomoserine su 99.7 2.7E-16 9.3E-21 159.6 17.8 194 154-379 46-245 (414)
79 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 6.3E-16 2.2E-20 156.3 19.3 187 159-379 37-235 (437)
80 3qhx_A Cystathionine gamma-syn 99.7 4.2E-16 1.4E-20 156.3 16.5 160 191-378 64-229 (392)
81 3mad_A Sphingosine-1-phosphate 99.7 9E-16 3.1E-20 158.7 19.5 174 192-379 134-328 (514)
82 3e9k_A Kynureninase; kynurenin 99.7 3.7E-17 1.2E-21 166.5 8.1 165 202-379 116-293 (465)
83 3acz_A Methionine gamma-lyase; 99.7 8.8E-16 3E-20 153.5 17.7 193 154-378 24-222 (389)
84 2po3_A 4-dehydrase; external a 99.7 1.3E-15 4.4E-20 153.0 18.7 189 156-378 21-214 (424)
85 2rfv_A Methionine gamma-lyase; 99.7 7.8E-16 2.7E-20 153.5 16.5 192 156-379 31-228 (398)
86 3a2b_A Serine palmitoyltransfe 99.7 1.1E-15 3.8E-20 151.3 17.2 200 152-379 44-257 (398)
87 3cog_A Cystathionine gamma-lya 99.7 6.5E-16 2.2E-20 155.8 15.7 185 154-379 40-231 (403)
88 1svv_A Threonine aldolase; str 99.7 9.8E-16 3.4E-20 148.1 15.7 191 161-379 24-231 (359)
89 1e5e_A MGL, methionine gamma-l 99.7 1.4E-15 4.7E-20 153.1 16.8 192 156-379 29-227 (404)
90 1jg8_A L-ALLO-threonine aldola 99.7 5.5E-16 1.9E-20 150.3 12.9 197 155-378 7-217 (347)
91 1v72_A Aldolase; PLP-dependent 99.7 1.6E-15 5.3E-20 146.8 15.9 191 162-379 19-227 (356)
92 3pj0_A LMO0305 protein; struct 99.7 3.3E-16 1.1E-20 152.6 11.1 202 147-379 9-223 (359)
93 3ly1_A Putative histidinol-pho 99.7 3.7E-15 1.3E-19 144.8 18.5 199 152-379 17-230 (354)
94 3dzz_A Putative pyridoxal 5'-p 99.6 2.9E-15 9.9E-20 147.0 17.5 203 152-378 28-250 (391)
95 2c0r_A PSAT, phosphoserine ami 99.6 2.3E-16 7.8E-21 154.3 9.2 200 152-379 4-212 (362)
96 1qz9_A Kynureninase; kynurenin 99.6 8.1E-16 2.8E-20 152.7 13.0 194 159-379 36-244 (416)
97 3nra_A Aspartate aminotransfer 99.6 5.2E-15 1.8E-19 146.2 18.7 195 163-378 54-269 (407)
98 3euc_A Histidinol-phosphate am 99.6 5.2E-15 1.8E-19 144.7 18.2 200 151-379 30-243 (367)
99 2aeu_A Hypothetical protein MJ 99.6 3.1E-15 1.1E-19 148.9 16.6 180 160-379 39-223 (374)
100 3nmy_A Xometc, cystathionine g 99.6 2.2E-15 7.5E-20 152.2 15.7 167 182-379 58-232 (400)
101 1c4k_A Protein (ornithine deca 99.6 8.2E-16 2.8E-20 167.0 13.3 163 202-379 178-371 (730)
102 1pff_A Methionine gamma-lyase; 99.6 1E-15 3.5E-20 147.9 12.6 152 202-378 3-162 (331)
103 1o4s_A Aspartate aminotransfer 99.6 6.5E-15 2.2E-19 146.0 18.1 206 151-379 41-263 (389)
104 2cb1_A O-acetyl homoserine sul 99.6 4.7E-15 1.6E-19 149.1 17.1 154 202-379 61-220 (412)
105 1cs1_A CGS, protein (cystathio 99.6 6.3E-15 2.2E-19 146.2 17.4 153 202-378 57-215 (386)
106 3get_A Histidinol-phosphate am 99.6 4.4E-15 1.5E-19 145.1 15.9 200 151-379 30-244 (365)
107 3n75_A LDC, lysine decarboxyla 99.6 1.1E-15 3.9E-20 165.4 12.8 160 202-379 200-383 (715)
108 1v2d_A Glutamine aminotransfer 99.6 6.2E-15 2.1E-19 145.1 16.7 200 151-379 25-239 (381)
109 1wyu_B Glycine dehydrogenase s 99.6 5.1E-15 1.8E-19 151.9 16.7 192 163-379 78-287 (474)
110 2vyc_A Biodegradative arginine 99.6 3.5E-15 1.2E-19 162.7 16.0 162 202-379 210-402 (755)
111 1gd9_A Aspartate aminotransfer 99.6 2.1E-14 7E-19 141.6 20.1 207 151-379 26-250 (389)
112 1n8p_A Cystathionine gamma-lya 99.6 2.9E-15 9.9E-20 150.4 13.9 151 202-378 60-220 (393)
113 4dq6_A Putative pyridoxal phos 99.6 1.5E-14 5.3E-19 141.8 18.2 202 151-378 32-254 (391)
114 3p1t_A Putative histidinol-pho 99.6 1.4E-14 4.7E-19 139.6 17.5 203 141-379 6-215 (337)
115 3ffh_A Histidinol-phosphate am 99.6 1.7E-14 5.7E-19 140.9 17.9 197 152-379 33-242 (363)
116 1j32_A Aspartate aminotransfer 99.6 2.2E-14 7.4E-19 141.4 18.2 206 151-379 30-254 (388)
117 3ele_A Amino transferase; RER0 99.6 6.3E-14 2.2E-18 138.5 21.4 207 152-379 36-265 (398)
118 3h14_A Aminotransferase, class 99.6 3.3E-14 1.1E-18 140.4 19.1 217 137-379 17-247 (391)
119 1u08_A Hypothetical aminotrans 99.6 3.9E-14 1.3E-18 139.6 19.5 207 151-379 30-253 (386)
120 2bwn_A 5-aminolevulinate synth 99.6 3.8E-14 1.3E-18 140.4 18.9 188 163-378 61-261 (401)
121 2z61_A Probable aspartate amin 99.6 8E-14 2.7E-18 136.6 20.4 199 151-379 29-239 (370)
122 3lws_A Aromatic amino acid bet 99.6 5.7E-15 1.9E-19 143.9 11.9 197 156-379 15-221 (357)
123 3kax_A Aminotransferase, class 99.6 2.2E-14 7.7E-19 140.3 16.1 202 152-378 25-246 (383)
124 1c7n_A Cystalysin; transferase 99.6 3.6E-14 1.2E-18 140.3 17.6 203 152-378 32-254 (399)
125 3g0t_A Putative aminotransfera 99.6 2.8E-14 9.7E-19 142.7 17.0 204 151-379 44-277 (437)
126 1xi9_A Putative transaminase; 99.6 1.5E-14 5.3E-19 143.9 14.5 205 151-378 38-263 (406)
127 2o0r_A RV0858C (N-succinyldiam 99.6 3.5E-14 1.2E-18 141.6 17.1 208 150-378 24-249 (411)
128 3cq5_A Histidinol-phosphate am 99.6 1.2E-13 4E-18 135.8 20.4 202 154-379 33-248 (369)
129 2x5d_A Probable aminotransfera 99.6 9.6E-14 3.3E-18 138.4 19.3 207 152-379 38-262 (412)
130 1ibj_A CBL, cystathionine beta 99.6 2.5E-14 8.6E-19 147.5 15.5 160 191-379 131-296 (464)
131 2x3l_A ORN/Lys/Arg decarboxyla 99.6 5.2E-15 1.8E-19 151.2 9.9 156 202-379 62-227 (446)
132 2gb3_A Aspartate aminotransfer 99.6 3.3E-14 1.1E-18 141.9 15.5 204 151-378 43-260 (409)
133 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 3.9E-15 1.3E-19 153.3 8.7 178 191-379 92-282 (450)
134 2dou_A Probable N-succinyldiam 99.6 5.7E-14 2E-18 138.0 16.6 208 151-379 25-247 (376)
135 2ez2_A Beta-tyrosinase, tyrosi 99.6 3.8E-14 1.3E-18 143.2 15.2 193 154-378 45-271 (456)
136 1yiz_A Kynurenine aminotransfe 99.5 9.2E-14 3.1E-18 139.1 17.5 226 132-379 19-272 (429)
137 3l8a_A METC, putative aminotra 99.5 6.4E-14 2.2E-18 140.5 15.6 204 151-378 61-284 (421)
138 3dyd_A Tyrosine aminotransfera 99.5 1.8E-13 6E-18 137.9 18.6 201 153-379 56-280 (427)
139 1d2f_A MALY protein; aminotran 99.5 1.5E-13 5.3E-18 135.5 17.7 203 152-378 29-249 (390)
140 1b5p_A Protein (aspartate amin 99.5 2.1E-13 7.1E-18 135.0 18.6 205 151-378 31-250 (385)
141 3fdb_A Beta C-S lyase, putativ 99.5 2.2E-13 7.6E-18 133.1 17.9 201 151-378 23-239 (377)
142 1bw0_A TAT, protein (tyrosine 99.5 2.2E-13 7.4E-18 135.6 18.0 201 153-379 35-270 (416)
143 3fvs_A Kynurenine--oxoglutarat 99.5 1.3E-13 4.5E-18 137.2 16.3 211 150-379 27-264 (422)
144 3hdo_A Histidinol-phosphate am 99.5 1.9E-13 6.4E-18 133.7 16.3 195 152-378 27-230 (360)
145 2o1b_A Aminotransferase, class 99.5 2.1E-13 7.2E-18 136.2 15.6 205 153-379 49-270 (404)
146 1ax4_A Tryptophanase; tryptoph 99.5 1.4E-13 4.7E-18 139.3 14.1 161 203-379 82-281 (467)
147 2oqx_A Tryptophanase; lyase, p 99.5 5.7E-14 2E-18 142.1 11.2 190 165-379 53-281 (467)
148 3op7_A Aminotransferase class 99.5 1.1E-13 3.9E-18 135.5 12.8 159 203-378 69-238 (375)
149 1w23_A Phosphoserine aminotran 99.5 2E-14 6.9E-19 139.7 6.9 195 153-379 4-211 (360)
150 2zc0_A Alanine glyoxylate tran 99.5 5.4E-13 1.9E-17 132.1 17.3 204 152-378 35-262 (407)
151 3ftb_A Histidinol-phosphate am 99.5 1.7E-12 5.7E-17 126.1 19.8 194 151-378 26-231 (361)
152 3e2y_A Kynurenine-oxoglutarate 99.5 2.2E-13 7.7E-18 134.8 13.7 207 151-379 23-257 (410)
153 3jtx_A Aminotransferase; NP_28 99.5 6.4E-13 2.2E-17 130.9 16.0 204 152-379 31-262 (396)
154 3if2_A Aminotransferase; YP_26 99.5 2.7E-13 9.2E-18 136.3 12.9 168 203-378 89-291 (444)
155 3piu_A 1-aminocyclopropane-1-c 99.5 6.8E-13 2.3E-17 133.4 15.8 148 221-379 115-290 (435)
156 3ruy_A Ornithine aminotransfer 99.5 1.4E-12 4.7E-17 128.8 17.6 185 163-379 53-268 (392)
157 2zyj_A Alpha-aminodipate amino 99.5 3E-13 1E-17 133.9 12.4 200 151-378 32-253 (397)
158 1lc5_A COBD, L-threonine-O-3-p 99.4 2.5E-12 8.6E-17 125.8 18.4 196 152-378 25-233 (364)
159 1iay_A ACC synthase 2, 1-amino 99.4 9.2E-13 3.2E-17 131.9 15.6 148 221-378 112-284 (428)
160 3ezs_A Aminotransferase ASPB; 99.4 9.1E-13 3.1E-17 128.9 14.8 202 152-379 24-248 (376)
161 3b46_A Aminotransferase BNA3; 99.4 9E-13 3.1E-17 133.7 14.4 209 150-378 56-291 (447)
162 2eh6_A Acoat, acetylornithine 99.4 2.7E-12 9.1E-17 125.6 17.0 187 163-379 45-257 (375)
163 3hl2_A O-phosphoseryl-tRNA(SEC 99.4 1E-13 3.6E-18 142.7 6.9 172 196-379 116-300 (501)
164 3rq1_A Aminotransferase class 99.4 2.6E-12 8.9E-17 128.1 16.6 223 133-376 15-276 (418)
165 1wyu_A Glycine dehydrogenase ( 99.4 2.3E-12 7.8E-17 130.3 15.6 160 197-379 108-277 (438)
166 3qgu_A LL-diaminopimelate amin 99.4 6.4E-12 2.2E-16 126.6 18.5 201 152-379 70-299 (449)
167 1vef_A Acetylornithine/acetyl- 99.4 2.4E-12 8.4E-17 127.1 15.0 188 162-379 61-270 (395)
168 1fg7_A Histidinol phosphate am 99.4 3.5E-12 1.2E-16 125.2 15.5 159 202-379 63-231 (356)
169 1vp4_A Aminotransferase, putat 99.4 2E-12 6.9E-17 129.7 13.8 205 151-379 43-276 (425)
170 3t18_A Aminotransferase class 99.4 4.6E-12 1.6E-16 126.1 16.3 144 221-376 105-275 (413)
171 2fyf_A PSAT, phosphoserine ami 99.4 7.7E-13 2.6E-17 131.4 10.3 196 150-379 38-238 (398)
172 2x5f_A Aspartate_tyrosine_phen 99.4 1.3E-12 4.4E-17 130.9 12.0 163 203-376 94-285 (430)
173 1s0a_A Adenosylmethionine-8-am 99.4 1.3E-11 4.6E-16 123.7 19.0 204 163-379 60-291 (429)
174 2oat_A Ornithine aminotransfer 99.4 8.9E-12 3E-16 126.6 17.8 196 153-379 78-309 (439)
175 1z7d_A Ornithine aminotransfer 99.4 1.2E-11 4.2E-16 125.2 18.5 186 163-379 82-298 (433)
176 3tcm_A Alanine aminotransferas 99.4 2.2E-11 7.6E-16 125.9 19.7 206 154-376 98-332 (500)
177 3aow_A Putative uncharacterize 99.3 7.1E-12 2.4E-16 127.6 14.6 207 151-379 76-305 (448)
178 4adb_A Succinylornithine trans 99.3 5.8E-12 2E-16 124.5 13.1 184 164-379 57-268 (406)
179 4f4e_A Aromatic-amino-acid ami 99.3 2.2E-11 7.4E-16 122.0 17.3 215 138-376 35-283 (420)
180 7aat_A Aspartate aminotransfer 99.3 1E-10 3.5E-15 115.7 21.1 214 138-376 14-264 (401)
181 3fsl_A Aromatic-amino-acid ami 99.3 2.2E-11 7.7E-16 119.9 15.4 202 152-376 27-261 (397)
182 3meb_A Aspartate aminotransfer 99.3 7E-11 2.4E-15 120.0 19.3 214 138-374 35-289 (448)
183 2r2n_A Kynurenine/alpha-aminoa 99.3 3.1E-11 1E-15 121.2 16.3 163 203-379 88-279 (425)
184 3fkd_A L-threonine-O-3-phospha 99.3 3.3E-11 1.1E-15 117.0 14.9 189 151-378 15-213 (350)
185 3b1d_A Betac-S lyase; HET: PLP 98.9 3E-13 1E-17 134.0 0.0 193 163-379 45-255 (392)
186 3ei9_A LL-diaminopimelate amin 99.3 4.3E-11 1.5E-15 119.9 15.7 203 152-380 57-288 (432)
187 3ez1_A Aminotransferase MOCR f 99.3 1.4E-11 4.8E-16 122.9 12.1 161 202-379 75-269 (423)
188 2eo5_A 419AA long hypothetical 99.3 1E-10 3.4E-15 117.4 18.3 205 153-379 44-298 (419)
189 1yaa_A Aspartate aminotransfer 99.3 3.5E-11 1.2E-15 119.6 14.8 199 152-375 30-267 (412)
190 3a8u_X Omega-amino acid--pyruv 99.3 4.2E-11 1.4E-15 121.0 15.5 195 163-379 67-305 (449)
191 1sff_A 4-aminobutyrate aminotr 99.3 5.3E-11 1.8E-15 118.5 15.6 193 163-379 58-284 (426)
192 1uu1_A Histidinol-phosphate am 99.3 3.9E-11 1.3E-15 116.2 14.0 188 153-379 21-219 (335)
193 3nx3_A Acoat, acetylornithine 99.3 1.1E-10 3.8E-15 115.4 17.3 193 163-379 53-264 (395)
194 2ord_A Acoat, acetylornithine 99.3 8.9E-11 3E-15 116.1 16.5 185 163-379 57-268 (397)
195 3ihj_A Alanine aminotransferas 99.3 5E-11 1.7E-15 123.4 15.1 197 160-376 99-331 (498)
196 2ay1_A Aroat, aromatic amino a 99.3 7.8E-11 2.7E-15 116.1 15.8 200 152-376 27-257 (394)
197 3f6t_A Aspartate aminotransfer 99.3 2.9E-11 9.9E-16 126.3 13.4 149 220-379 166-330 (533)
198 2q7w_A Aspartate aminotransfer 99.2 1.6E-10 5.3E-15 113.8 17.3 200 152-376 27-260 (396)
199 3ppl_A Aspartate aminotransfer 99.2 8.8E-11 3E-15 117.6 15.3 161 202-379 83-276 (427)
200 1ajs_A Aspartate aminotransfer 99.2 2.7E-10 9.2E-15 113.1 17.6 214 138-376 16-272 (412)
201 3g7q_A Valine-pyruvate aminotr 99.2 3.3E-11 1.1E-15 119.5 9.9 164 203-378 81-265 (417)
202 3d6k_A Putative aminotransfera 99.2 6.3E-11 2.2E-15 118.8 11.9 220 132-379 14-274 (422)
203 3dxv_A Alpha-amino-epsilon-cap 99.2 1.8E-10 6E-15 115.9 15.1 194 163-379 60-286 (439)
204 3asa_A LL-diaminopimelate amin 99.2 3.6E-10 1.2E-14 112.2 17.0 201 152-380 34-254 (400)
205 2pb2_A Acetylornithine/succiny 99.2 2.4E-10 8.1E-15 115.0 15.8 185 163-379 74-286 (420)
206 3i4j_A Aminotransferase, class 99.2 4.6E-10 1.6E-14 112.5 16.2 195 164-379 47-278 (430)
207 3tfu_A Adenosylmethionine-8-am 99.2 3.7E-10 1.3E-14 115.5 15.3 202 164-379 93-320 (457)
208 3n5m_A Adenosylmethionine-8-am 99.2 1.2E-09 4.2E-14 110.4 18.9 200 164-379 67-301 (452)
209 2epj_A Glutamate-1-semialdehyd 99.1 4.6E-10 1.6E-14 112.8 15.4 190 163-379 73-287 (434)
210 4eu1_A Mitochondrial aspartate 99.1 5.3E-10 1.8E-14 111.1 15.4 142 222-374 109-270 (409)
211 3l44_A Glutamate-1-semialdehyd 99.1 1.4E-09 4.7E-14 109.2 18.0 184 163-379 72-286 (434)
212 3dod_A Adenosylmethionine-8-am 99.1 1.7E-09 5.9E-14 109.5 18.3 195 163-379 61-297 (448)
213 3k28_A Glutamate-1-semialdehyd 99.1 2.2E-09 7.4E-14 107.8 17.7 188 163-379 70-284 (429)
214 1zod_A DGD, 2,2-dialkylglycine 99.1 1.2E-09 4.3E-14 109.3 15.9 202 164-379 61-288 (433)
215 2cjg_A L-lysine-epsilon aminot 99.1 1.5E-09 5.1E-14 110.3 16.0 198 163-379 71-312 (449)
216 3fq8_A Glutamate-1-semialdehyd 99.1 3.7E-09 1.3E-13 105.8 18.5 191 163-379 69-283 (427)
217 4a6r_A Omega transaminase; tra 99.1 3.1E-09 1E-13 108.1 18.1 194 164-379 68-305 (459)
218 2cy8_A D-phgat, D-phenylglycin 99.1 1.2E-09 4E-14 110.6 14.5 190 163-379 74-285 (453)
219 3gju_A Putative aminotransfera 99.1 4E-09 1.4E-13 107.3 17.8 202 164-379 69-307 (460)
220 4e77_A Glutamate-1-semialdehyd 99.1 5.4E-09 1.8E-13 104.8 18.4 201 153-379 55-284 (429)
221 3hmu_A Aminotransferase, class 99.0 7.5E-09 2.6E-13 106.3 17.3 195 164-379 73-309 (472)
222 4ffc_A 4-aminobutyrate aminotr 99.0 6.8E-09 2.3E-13 105.7 16.8 204 164-379 82-310 (453)
223 2e7u_A Glutamate-1-semialdehyd 99.0 3.7E-09 1.3E-13 105.9 14.3 201 153-379 54-282 (424)
224 3oks_A 4-aminobutyrate transam 99.0 3.5E-09 1.2E-13 107.7 13.6 203 164-379 79-312 (451)
225 3i5t_A Aminotransferase; pyrid 99.0 1.4E-08 4.9E-13 104.3 18.3 203 163-379 71-308 (476)
226 2zy4_A L-aspartate beta-decarb 98.9 7.1E-09 2.4E-13 108.8 14.9 147 220-379 167-332 (546)
227 1ohv_A 4-aminobutyrate aminotr 98.9 9.6E-10 3.3E-14 112.9 7.4 82 289-375 241-338 (472)
228 4ao9_A Beta-phenylalanine amin 98.9 1.9E-08 6.6E-13 103.6 16.5 158 204-379 134-303 (454)
229 3k7y_A Aspartate aminotransfer 98.8 3.6E-07 1.2E-11 92.3 20.3 214 138-376 15-263 (405)
230 2yky_A Beta-transaminase; tran 98.1 1.9E-09 6.5E-14 111.3 0.0 197 153-379 102-316 (465)
231 4h51_A Aspartate aminotransfer 98.6 5.1E-07 1.7E-11 91.9 15.1 233 125-379 19-282 (420)
232 4atq_A 4-aminobutyrate transam 98.4 1.5E-05 5.1E-10 82.0 21.1 171 204-379 114-311 (456)
233 3bwn_A AT1G70560, L-tryptophan 98.3 5E-07 1.7E-11 89.9 6.1 130 220-376 93-231 (391)
234 2hox_A ALLIIN lyase 1; cystein 98.1 9.9E-07 3.4E-11 89.2 2.8 129 220-378 125-267 (427)
235 4e3q_A Pyruvate transaminase; 97.7 0.00043 1.5E-08 71.4 15.0 169 204-379 118-322 (473)
236 4a0g_A Adenosylmethionine-8-am 97.6 0.00054 1.8E-08 75.4 14.0 87 291-379 577-681 (831)
237 2yxb_A Coenzyme B12-dependent 63.7 11 0.00036 32.7 5.6 61 272-337 45-108 (161)
238 1y80_A Predicted cobalamin bin 54.7 22 0.00076 31.6 6.3 62 272-338 115-180 (210)
239 1xrs_B D-lysine 5,6-aminomutas 49.6 39 0.0013 31.8 7.3 60 273-337 157-223 (262)
240 1ccw_A Protein (glutamate muta 49.6 17 0.00059 30.3 4.4 61 272-337 30-93 (137)
241 1zco_A 2-dehydro-3-deoxyphosph 46.7 27 0.00091 32.8 5.7 58 285-342 137-205 (262)
242 3nvt_A 3-deoxy-D-arabino-heptu 44.5 19 0.00064 35.9 4.4 57 285-341 256-323 (385)
243 3ezx_A MMCP 1, monomethylamine 41.4 32 0.0011 31.1 5.2 61 272-337 119-185 (215)
244 4gqr_A Pancreatic alpha-amylas 41.1 15 0.0005 36.3 3.1 28 310-337 71-98 (496)
245 1vli_A Spore coat polysacchari 40.5 77 0.0026 31.5 8.1 84 285-371 165-260 (385)
246 1vs1_A 3-deoxy-7-phosphoheptul 35.4 53 0.0018 31.1 5.8 57 285-341 152-219 (276)
247 1vr6_A Phospho-2-dehydro-3-deo 34.8 32 0.0011 33.8 4.3 57 285-341 220-287 (350)
248 3sz8_A 2-dehydro-3-deoxyphosph 34.7 39 0.0013 32.3 4.7 56 285-340 141-206 (285)
249 2i2x_B MTAC, methyltransferase 33.8 50 0.0017 30.5 5.3 61 272-337 150-212 (258)
250 1lwj_A 4-alpha-glucanotransfer 33.0 25 0.00085 34.8 3.2 28 310-337 64-91 (441)
251 3bh4_A Alpha-amylase; calcium, 32.9 25 0.00086 35.3 3.3 28 310-337 73-100 (483)
252 1g94_A Alpha-amylase; beta-alp 32.1 24 0.00082 35.1 2.9 28 310-337 59-86 (448)
253 4aie_A Glucan 1,6-alpha-glucos 31.7 26 0.00091 35.2 3.2 28 310-337 74-101 (549)
254 1wpc_A Glucan 1,4-alpha-maltoh 31.1 28 0.00095 34.9 3.3 28 310-337 77-104 (485)
255 1ud2_A Amylase, alpha-amylase; 31.0 28 0.00096 34.9 3.3 27 311-337 76-102 (480)
256 2ab1_A Hypothetical protein; H 30.7 78 0.0027 26.1 5.4 52 287-339 48-99 (122)
257 1hvx_A Alpha-amylase; hydrolas 30.3 29 0.00099 35.3 3.3 28 310-337 76-103 (515)
258 1ht6_A AMY1, alpha-amylase iso 30.3 30 0.001 34.0 3.2 28 310-337 63-90 (405)
259 2guy_A Alpha-amylase A; (beta- 30.1 30 0.001 34.6 3.3 28 310-337 92-119 (478)
260 1mxg_A Alpha amylase; hyperthe 30.0 30 0.001 34.4 3.3 28 310-337 81-108 (435)
261 2qkf_A 3-deoxy-D-manno-octulos 28.9 41 0.0014 31.8 3.8 55 285-339 136-200 (280)
262 1gcy_A Glucan 1,4-alpha-maltot 28.2 35 0.0012 34.9 3.4 28 310-337 87-114 (527)
263 1n8f_A DAHP synthetase; (beta/ 28.0 54 0.0019 32.2 4.6 41 301-342 226-272 (350)
264 1wza_A Alpha-amylase A; hydrol 28.0 30 0.001 34.7 2.9 28 310-337 76-103 (488)
265 2aaa_A Alpha-amylase; glycosid 27.5 33 0.0011 34.4 3.0 28 310-337 92-119 (484)
266 1o60_A 2-dehydro-3-deoxyphosph 27.3 44 0.0015 31.9 3.7 55 285-339 139-203 (292)
267 2z1k_A (NEO)pullulanase; hydro 26.5 32 0.0011 34.3 2.7 28 310-337 91-118 (475)
268 4e84_A D-beta-D-heptose 7-phos 26.5 1.8E+02 0.0063 27.6 8.1 36 302-337 187-222 (352)
269 2dh2_A 4F2 cell-surface antige 26.1 34 0.0012 33.9 2.9 28 310-337 76-103 (424)
270 3dhu_A Alpha-amylase; structur 25.8 33 0.0011 34.0 2.7 27 311-337 79-105 (449)
271 1jae_A Alpha-amylase; glycosid 25.6 30 0.001 34.7 2.3 27 311-337 70-96 (471)
272 3v7e_A Ribosome-associated pro 25.5 77 0.0026 24.0 4.2 51 290-342 16-67 (82)
273 3fs2_A 2-dehydro-3-deoxyphosph 25.5 41 0.0014 32.3 3.1 55 285-340 162-225 (298)
274 1zja_A Trehalulose synthase; s 25.2 40 0.0014 34.6 3.2 28 310-337 74-101 (557)
275 2wc7_A Alpha amylase, catalyti 24.5 33 0.0011 34.4 2.4 28 310-337 97-124 (488)
276 2rdx_A Mandelate racemase/muco 24.2 1.1E+02 0.0036 29.7 6.0 51 286-336 245-295 (379)
277 3zqu_A Probable aromatic acid 24.2 1.4E+02 0.0049 26.8 6.4 66 150-215 130-195 (209)
278 1cyg_A Cyclodextrin glucanotra 23.9 43 0.0015 35.4 3.2 28 310-337 106-133 (680)
279 2lbw_A H/ACA ribonucleoprotein 23.7 1.4E+02 0.0047 24.3 5.7 51 290-342 25-77 (121)
280 1ua7_A Alpha-amylase; beta-alp 23.6 37 0.0013 33.5 2.5 28 310-337 69-96 (422)
281 1d3c_A Cyclodextrin glycosyltr 23.5 44 0.0015 35.3 3.2 28 310-337 110-137 (686)
282 1qho_A Alpha-amylase; glycosid 23.5 44 0.0015 35.3 3.2 28 310-337 102-129 (686)
283 3edf_A FSPCMD, cyclomaltodextr 23.3 45 0.0015 34.6 3.2 27 311-337 194-220 (601)
284 1j0h_A Neopullulanase; beta-al 23.3 45 0.0016 34.5 3.2 28 310-337 217-244 (588)
285 1m53_A Isomaltulose synthase; 23.0 39 0.0013 34.8 2.7 27 311-337 88-114 (570)
286 3bmv_A Cyclomaltodextrin gluca 22.8 46 0.0016 35.1 3.2 28 310-337 111-138 (683)
287 2nwr_A 2-dehydro-3-deoxyphosph 22.8 63 0.0022 30.4 3.8 51 288-340 129-187 (267)
288 3kp1_A D-ornithine aminomutase 22.6 1.7E+02 0.0058 31.4 7.3 62 271-337 632-700 (763)
289 3on1_A BH2414 protein; structu 22.6 1.1E+02 0.0038 24.0 4.7 43 290-334 23-65 (101)
290 3aj7_A Oligo-1,6-glucosidase; 22.2 49 0.0017 34.3 3.2 28 310-337 82-109 (589)
291 1wzl_A Alpha-amylase II; pullu 22.2 46 0.0016 34.4 3.0 28 310-337 214-241 (585)
292 1uok_A Oligo-1,6-glucosidase; 22.2 42 0.0014 34.5 2.7 28 310-337 73-100 (558)
293 3bc9_A AMYB, alpha amylase, ca 21.7 48 0.0017 34.6 3.1 28 310-337 203-230 (599)
294 4aef_A Neopullulanase (alpha-a 21.5 43 0.0015 35.0 2.7 28 310-337 280-307 (645)
295 3ghf_A Septum site-determining 21.3 1E+02 0.0035 25.3 4.4 46 288-333 25-78 (120)
296 1sjd_A N-acylamino acid racema 21.0 1.4E+02 0.0047 28.7 6.0 50 286-335 241-290 (368)
297 2zic_A Dextran glucosidase; TI 20.8 44 0.0015 34.2 2.5 27 311-337 74-100 (543)
298 2ze0_A Alpha-glucosidase; TIM 20.7 45 0.0015 34.2 2.5 27 311-337 74-100 (555)
299 3cpq_A 50S ribosomal protein L 20.6 1.4E+02 0.0049 23.7 5.1 51 290-342 26-78 (110)
300 3i4k_A Muconate lactonizing en 20.4 1.6E+02 0.0054 28.6 6.4 51 286-336 253-303 (383)
301 3j21_Z 50S ribosomal protein L 20.4 1.4E+02 0.0049 23.1 5.0 51 290-342 20-72 (99)
302 1g5a_A Amylosucrase; glycosylt 20.2 57 0.0019 34.2 3.2 28 310-337 157-184 (628)
303 1ea9_C Cyclomaltodextrinase; h 20.2 49 0.0017 34.2 2.7 28 310-337 213-240 (583)
304 3tml_A 2-dehydro-3-deoxyphosph 20.0 39 0.0013 32.3 1.8 55 285-340 138-207 (288)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=2.5e-68 Score=545.12 Aligned_cols=271 Identities=58% Similarity=0.995 Sum_probs=221.5
Q ss_pred hhhhh-cCCCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHH
Q 015647 123 GVRAW-GNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENL 201 (403)
Q Consensus 123 ~~~~~-~~~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~ 201 (403)
+.+.| ++++|++.||||+++|++|..||+++|+||||||++|++|++|+++.|+|+|+||+||.|||+||+++|++|.+
T Consensus 25 ~~~~~~~~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~l 104 (490)
T 3ou5_A 25 ANRGWTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELL 104 (490)
T ss_dssp ---CCSSCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHH
T ss_pred cccccccccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHH
Confidence 45567 46899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
|++|++++||+++++|+||||++||++||.+++.+|++|||+||.+++.||||++|+++.. ..++++.+++|+.++|++
T Consensus 105 a~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~-~~~v~~sg~~~~~~~Y~v 183 (490)
T 3ou5_A 105 CQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSD-VKRISATSIFFESMPYKL 183 (490)
T ss_dssp HHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC-----------------------------CBCE
T ss_pred HHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCC-Cccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999997542 245678888899999999
Q ss_pred CCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEc
Q 015647 282 NPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTST 361 (403)
Q Consensus 282 d~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~S 361 (403)
|++++.||||++++++++++|||||++.|.|++.+|+++|++||+++|++|++|+||.+|+|++|++++|+++||+||+|
T Consensus 184 d~~t~~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtT 263 (490)
T 3ou5_A 184 NPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTT 263 (490)
T ss_dssp ETTTTEECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEE
T ss_pred CCCCCcccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCcCCceEEEEEeCC-----------------CCCcccCCCcccCCc
Q 015647 362 THKSLRGPRGGIIFFRRG-----------------KKPRKQGIPLNHGDV 394 (403)
Q Consensus 362 tHKtL~GP~GG~I~~~~~-----------------~~~~~~~~p~~qGg~ 394 (403)
|||||+||+||+|+++++ ++++..+||+.|||-
T Consensus 264 THKTLrGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp 313 (490)
T 3ou5_A 264 THKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGP 313 (490)
T ss_dssp SSSTTCSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSC
T ss_pred ccccccCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccc
Confidence 999999999999999974 246678999999985
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=1.7e-48 Score=406.39 Aligned_cols=269 Identities=58% Similarity=0.996 Sum_probs=206.9
Q ss_pred hh-cCCCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHH
Q 015647 126 AW-GNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFE 204 (403)
Q Consensus 126 ~~-~~~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~are 204 (403)
.| +...|+++||||+++|++|+.||++.|+||||+|+++|+|++||.+.+.++|++||||+|||.|+++++++|++|++
T Consensus 28 ~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~ 107 (490)
T 2a7v_A 28 GWTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQR 107 (490)
T ss_dssp CCSSCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHH
T ss_pred cccccchhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHH
Confidence 45 44779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC
Q 015647 205 RALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ 284 (403)
Q Consensus 205 rla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~ 284 (403)
+++++||+++++|+++|+++|||+||++++.++++|||+||+++++|+||++|+++... +.+.+.|..+++++|+++++
T Consensus 108 ~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~-~~i~~~g~~~~~~~~~vd~~ 186 (490)
T 2a7v_A 108 RALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDV-KRISATSIFFESMPYKLNPK 186 (490)
T ss_dssp HHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC--------------------------------CCBCTT
T ss_pred HHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcc-hhHHHcCCeEEEEecccccc
Confidence 99999999998887788888999999999999999999999999999999999865422 23445666677788888877
Q ss_pred CCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcC
Q 015647 285 TGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHK 364 (403)
Q Consensus 285 ~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHK 364 (403)
++.+|+++|++++++++||+|+++.++||+.+|+++|++||+++|++||+|+||++|+++.+..+.+++++|++++|+||
T Consensus 187 ~~~iD~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK 266 (490)
T 2a7v_A 187 TGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHK 266 (490)
T ss_dssp TCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSG
T ss_pred cCCcCHHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcc
Confidence 89999999999997668999999888999999999999999999999999999999999888777787789999999999
Q ss_pred CCcCCceEEEEEeCC-----------------CCCcccCCCcccCCcc
Q 015647 365 SLRGPRGGIIFFRRG-----------------KKPRKQGIPLNHGDVV 395 (403)
Q Consensus 365 tL~GP~GG~I~~~~~-----------------~~~~~~~~p~~qGg~~ 395 (403)
+|+||+||+|+++++ .++++.++|+.|||..
T Consensus 267 ~l~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~ 314 (490)
T 2a7v_A 267 TLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPH 314 (490)
T ss_dssp GGCSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCC
T ss_pred cCccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCch
Confidence 999999999999875 1344567888887754
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=3.2e-42 Score=356.45 Aligned_cols=255 Identities=61% Similarity=1.022 Sum_probs=227.8
Q ss_pred hhhhcCCCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHH
Q 015647 124 VRAWGNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCF 203 (403)
Q Consensus 124 ~~~~~~~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~ar 203 (403)
...|.++.|..+||+++++|.+|..||.+.|+|++++|++++.|++++.+.+.++|++|||+++||.|++.++++|+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~ 96 (483)
T 1rv3_A 17 HEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQ 96 (483)
T ss_dssp HHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHH
T ss_pred HHHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHH
Confidence 34556667888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC
Q 015647 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP 283 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~ 283 (403)
++++++||+++++|+++|+++||++||.+++.++++|||+||+++++|++|++|++.... ..+.+.|..++.+++++++
T Consensus 97 ~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~-~~v~~~G~~~~~v~~~~~~ 175 (483)
T 1rv3_A 97 KRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDK-KKISATSIFFESMAYKVNP 175 (483)
T ss_dssp HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSS-CBCSHHHHHSEEEEECBCT
T ss_pred HHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcc-cCcccccceEEEEECcccc
Confidence 999999999987777789999999999999999999999999999999999988764321 2344555557788888887
Q ss_pred CCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCc
Q 015647 284 QTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTH 363 (403)
Q Consensus 284 ~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StH 363 (403)
+++.+|+++|++++.+.+||+|+++.+++++++|+++|++||+++|++|++|++|+.|+++.+..+.|+.++|++++|+|
T Consensus 176 ~~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~ 255 (483)
T 1rv3_A 176 DTGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 255 (483)
T ss_dssp TTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESS
T ss_pred CCCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCc
Confidence 78899999999999856899998876778888999999999999999999999999999988877777777999999999
Q ss_pred CCCcCCceEEEEEeCC
Q 015647 364 KSLRGPRGGIIFFRRG 379 (403)
Q Consensus 364 KtL~GP~GG~I~~~~~ 379 (403)
|+|+||+||+|+++++
T Consensus 256 K~l~GprgG~i~~~~~ 271 (483)
T 1rv3_A 256 KTLRGCRAGMIFYRRG 271 (483)
T ss_dssp GGGCCCSCEEEEEECS
T ss_pred ccCCCCCceEEEEcch
Confidence 9999999999999875
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.3e-34 Score=293.61 Aligned_cols=255 Identities=44% Similarity=0.710 Sum_probs=217.6
Q ss_pred CCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 015647 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKA 209 (403)
Q Consensus 130 ~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~l 209 (403)
..|..++|++++.+.+|..||.+.|+|++++|+++|.|++++...+.++|..|+++++|+.|+...+.+|+.++++++++
T Consensus 24 ~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~ 103 (447)
T 3h7f_A 24 APLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKAL 103 (447)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHH
Confidence 44677899999999999999999999999999999999999999888889889999999999999999998888999999
Q ss_pred cCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCC
Q 015647 210 FDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYID 289 (403)
Q Consensus 210 fg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID 289 (403)
+|++. +.++++||++||.+++.++++|||+|++....|++|+.++. .+...+..+..++++++++++.+|
T Consensus 104 ~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~~d 173 (447)
T 3h7f_A 104 FGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM------RLNFSGKLYENGFYGVDPATHLID 173 (447)
T ss_dssp HTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC------TTSHHHHSSEEEEECCCTTTCSCC
T ss_pred cCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhh------hhhhcCCeeEEEEcCcCcccCCcC
Confidence 99986 45658899999999999999999999999999988776653 123344456677778776678899
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCC
Q 015647 290 YEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP 369 (403)
+++|++++++.++++|+++.++++...|+++|+++|+++|++|++|++|+.|++..+..+.+++++|++++|+||+|+||
T Consensus 174 ~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~ 253 (447)
T 3h7f_A 174 MDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGG 253 (447)
T ss_dssp HHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCC
T ss_pred HHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCC
Confidence 99999999766789999887788888899999999999999999999999998776666666667899999999999999
Q ss_pred ceEEEEEeCCC--CCcccCCCcccCCc
Q 015647 370 RGGIIFFRRGK--KPRKQGIPLNHGDV 394 (403)
Q Consensus 370 ~GG~I~~~~~~--~~~~~~~p~~qGg~ 394 (403)
+||+++++++. .+.+..+++.+|+.
T Consensus 254 ~gG~i~~~~~~~~~l~~~~~~~~~~~~ 280 (447)
T 3h7f_A 254 RSGLIVGKQQYAKAINSAVFPGQQGGP 280 (447)
T ss_dssp SCEEEEECGGGHHHHHHHHTTTTCSSC
T ss_pred CeEEEEECHHHHHHHhhhcCCcccCCc
Confidence 99999988742 23344456666544
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.98 E-value=6.2e-32 Score=268.90 Aligned_cols=236 Identities=53% Similarity=0.899 Sum_probs=197.3
Q ss_pred CCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC
Q 015647 132 LPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD 211 (403)
Q Consensus 132 l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg 211 (403)
++.+||++++.+.+|..+|.+.+.|++++|+++|.|++++...+.+.|..|+++++++.+....+++|+.+++++++++|
T Consensus 6 ~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g 85 (417)
T 3n0l_A 6 LEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN 85 (417)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred hhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999999999999999999988788888999999999999999999989999999999
Q ss_pred CCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHH
Q 015647 212 LDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYE 291 (403)
Q Consensus 212 ~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d 291 (403)
+++ .+|+++|||+|+.+++.+++++||+|++....|+++..++. .+...+..+..++++++ +++.+|++
T Consensus 86 ~~~----~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~-~~~~~d~~ 154 (417)
T 3n0l_A 86 CKF----ANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGA------KVSSSGKMYESCFYGVE-LDGRIDYE 154 (417)
T ss_dssp CSE----EECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------------CCSEEEEECCC-TTSSCCHH
T ss_pred CCC----cceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhh------hhhhhcceeeeEeccCC-CCCCcCHH
Confidence 987 35788999999999999999999999999998887765442 23344555667777777 57889999
Q ss_pred HHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce
Q 015647 292 KLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG 371 (403)
Q Consensus 292 ~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G 371 (403)
+|++++.+.++++|++..+++|...|+++|.++|+++|++|++|++|+.|++..+..+.++..+|++++|+||+|.||+|
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~ 234 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG 234 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSC
T ss_pred HHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCe
Confidence 99999985578999887777899999999999999999999999999999887665555555689999999999999999
Q ss_pred EEEEEeC
Q 015647 372 GIIFFRR 378 (403)
Q Consensus 372 G~I~~~~ 378 (403)
|++++++
T Consensus 235 G~~~~~~ 241 (417)
T 3n0l_A 235 GIIMTND 241 (417)
T ss_dssp EEEEESC
T ss_pred eEEEECC
Confidence 9999984
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.97 E-value=1.9e-30 Score=257.98 Aligned_cols=236 Identities=47% Similarity=0.809 Sum_probs=184.3
Q ss_pred CCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC
Q 015647 132 LPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD 211 (403)
Q Consensus 132 l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg 211 (403)
++.++|++++++.++..++.+.+.+++++|+++|.|++++...+.+.+..|+++++++.+....+.+++.+++++++++|
T Consensus 11 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 90 (420)
T 3gbx_A 11 IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG 90 (420)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT
T ss_pred hhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC
Confidence 67889999999999999999999999999999999999999888778888999999988888778888888999999999
Q ss_pred CCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHH
Q 015647 212 LDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYE 291 (403)
Q Consensus 212 ~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d 291 (403)
+++ ..|+++||++|+.+++.+++++||+|++....|++++.++. .+...+..+..++++++ +++.+|++
T Consensus 91 ~~~----~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~-~~~~~d~~ 159 (420)
T 3gbx_A 91 ADY----ANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGS------PVNFSGKLYNIVPYGID-ESGKIDYD 159 (420)
T ss_dssp CSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------------CHHHHSEEEEEEEC-TTCSCCHH
T ss_pred CCC----ceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccch------hhhhcccceeEEeccCC-ccCCcCHH
Confidence 986 35667899999999999999999999999988877664442 12233444566677776 46789999
Q ss_pred HHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce
Q 015647 292 KLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG 371 (403)
Q Consensus 292 ~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G 371 (403)
+|++++++.++++|++..+++|...|+++|.++|+++|++|++|++|+.|....+..+..+..+|++++|+||+|.||+|
T Consensus 160 ~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g 239 (420)
T 3gbx_A 160 EMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRG 239 (420)
T ss_dssp HHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSC
T ss_pred HHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCc
Confidence 99999987678999987778888999999999999999999999999998876655555555689999999999999999
Q ss_pred EEEEEeC
Q 015647 372 GIIFFRR 378 (403)
Q Consensus 372 G~I~~~~ 378 (403)
|++++++
T Consensus 240 g~~~~~~ 246 (420)
T 3gbx_A 240 GLILAKG 246 (420)
T ss_dssp EEEEESS
T ss_pred eEEEEcC
Confidence 9999987
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=6.3e-30 Score=254.59 Aligned_cols=241 Identities=48% Similarity=0.765 Sum_probs=184.2
Q ss_pred CCCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHH
Q 015647 129 NQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALK 208 (403)
Q Consensus 129 ~~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~ 208 (403)
...+..++|+++..+.++..++.+.+.|++++|+++|.|++++...+.+.|..|+++.+++.+....+.+++.+++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 89 (425)
T 3ecd_A 10 SQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKR 89 (425)
T ss_dssp HCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHH
T ss_pred HHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHH
Confidence 34577789999999999988999999999999999999999999888778888899989988887777778888889999
Q ss_pred HcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCC
Q 015647 209 AFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYI 288 (403)
Q Consensus 209 lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~I 288 (403)
++|++. +.|+++||++|+.+++.+++++||+|++....|++++.++. .+...+..+..++++++++++.+
T Consensus 90 ~~~~~~----~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~~ 159 (425)
T 3ecd_A 90 LFNAGH----ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA------KPALSGKWFNALQYGVSRDTMLI 159 (425)
T ss_dssp HHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------------CEEEEECCCTTTSSC
T ss_pred HhCCCC----ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecch------hhhhcccceeeeecCCCcccCcc
Confidence 999987 34557899999999999999999999999988877554332 12234444566777777667889
Q ss_pred CHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcC
Q 015647 289 DYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRG 368 (403)
Q Consensus 289 D~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~G 368 (403)
|+++|++++.+.++++|+++.+++|...++++|.++|+++|++|++|++|+.|+...+....++..+|++++|+||+|.|
T Consensus 160 d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g 239 (425)
T 3ecd_A 160 DYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRG 239 (425)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCC
T ss_pred CHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCC
Confidence 99999999976678999888778899999999999999999999999999999876655444454589999999999999
Q ss_pred CceEEEEEeCC
Q 015647 369 PRGGIIFFRRG 379 (403)
Q Consensus 369 P~GG~I~~~~~ 379 (403)
|+||+++++++
T Consensus 240 ~~~g~~~~~~~ 250 (425)
T 3ecd_A 240 PRGGFVLTNDE 250 (425)
T ss_dssp CSCEEEEESCH
T ss_pred CCcEEEEeCCH
Confidence 99999998864
No 8
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.96 E-value=4.2e-28 Score=240.31 Aligned_cols=238 Identities=51% Similarity=0.857 Sum_probs=192.9
Q ss_pred CCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC
Q 015647 132 LPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD 211 (403)
Q Consensus 132 l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg 211 (403)
+.++||+++..+.++..++.+.+.+.+++++.++.|++++...+.+++..|+++++++.|.....++|+.+|+++++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g 83 (405)
T 2vi8_A 4 LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFG 83 (405)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC
Confidence 45679999999999988888889999999999999999999887666666788888888877778899888999999999
Q ss_pred CCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHH
Q 015647 212 LDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYE 291 (403)
Q Consensus 212 ~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d 291 (403)
+++ ..++++|||+|+.+++.+++++||+|++....|+++..... .+...|..+++++++++++++.+|++
T Consensus 84 ~~~----~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~~d~~ 153 (405)
T 2vi8_A 84 AEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS------PVNFSGVQYNFVAYGVDPETHVIDYD 153 (405)
T ss_dssp CSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC------TTSHHHHHSEEEEECBCTTTCSBCHH
T ss_pred CCc----eEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc------hhhhccceeEEEecccccccCCcCHH
Confidence 986 34567899999999999999999999999877665532110 11233433466777776456789999
Q ss_pred HHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce
Q 015647 292 KLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG 371 (403)
Q Consensus 292 ~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G 371 (403)
+|++++++.++++|++..+++|...|+++|.++|+++|++|++|++|+.|....+....++..+|++++|+||+|+||.|
T Consensus 154 ~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g 233 (405)
T 2vi8_A 154 DVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG 233 (405)
T ss_dssp HHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC
T ss_pred HHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC
Confidence 99999976568998887677888889999999999999999999999988765444333333589999999999988999
Q ss_pred EEEEEeCC
Q 015647 372 GIIFFRRG 379 (403)
Q Consensus 372 G~I~~~~~ 379 (403)
|+++++++
T Consensus 234 G~~~~~~~ 241 (405)
T 2vi8_A 234 GMILCQEQ 241 (405)
T ss_dssp EEEEECHH
T ss_pred eEEEEcHH
Confidence 99998753
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.95 E-value=9.8e-28 Score=237.81 Aligned_cols=236 Identities=50% Similarity=0.864 Sum_probs=192.7
Q ss_pred CCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC
Q 015647 133 PLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL 212 (403)
Q Consensus 133 ~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~ 212 (403)
...||++++.+.++..++.+.|.+.+++++++|.|++++...+.+.+..+|++.+++.|.+..+.+|+.+|+++++++|+
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~ 84 (407)
T 2dkj_A 5 LKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA 84 (407)
T ss_dssp -CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC
Confidence 35689999999999998899999999999999999999998876555567787777778877778888889999999999
Q ss_pred CCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHH
Q 015647 213 DSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEK 292 (403)
Q Consensus 213 ~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~ 292 (403)
++ ..|+++|||+|+.+++.+++++||+|++....|++++... ..+...|..+..++++++++++.+|+++
T Consensus 85 ~~----~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~------~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 154 (407)
T 2dkj_A 85 AW----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHG------SRVNFSGKLYKVVSYGVRPDTELIDLEE 154 (407)
T ss_dssp SE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGT------CTTSHHHHHSEEEEECCCTTTSSCCHHH
T ss_pred Cc----ceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchH------HHHHhcCceEEEEecCCCcccCccCHHH
Confidence 86 3577789999999999999999999999988776653211 1223344434556666654467899999
Q ss_pred HHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceE
Q 015647 293 LEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGG 372 (403)
Q Consensus 293 Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG 372 (403)
|++++++.++++|++..+++|...|+++|.++|+++|++|++|++|+.|+...+....+++.+|++++|+||+|.|++||
T Consensus 155 l~~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G 234 (407)
T 2dkj_A 155 VRRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGG 234 (407)
T ss_dssp HHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCE
T ss_pred HHHHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCce
Confidence 99999755689988866778888999999999999999999999999988765543333445899999999999999999
Q ss_pred EEEEeC
Q 015647 373 IIFFRR 378 (403)
Q Consensus 373 ~I~~~~ 378 (403)
++++++
T Consensus 235 ~~~~~~ 240 (407)
T 2dkj_A 235 LILSND 240 (407)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 999984
No 10
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.89 E-value=3.5e-22 Score=204.63 Aligned_cols=223 Identities=17% Similarity=0.140 Sum_probs=162.7
Q ss_pred CCChHHH---HHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcC----CCCCCCCccccchHHHHHHHHHHHHHH
Q 015647 134 LADPEIF---DIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKY----SEGYPGARYYTGNQYIDQIENLCFERA 206 (403)
Q Consensus 134 ~~d~ei~---~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y----~eG~pgsr~~~G~~~~~~lE~~arerl 206 (403)
.+|+++. +.+++|.+||...+++++++|. ++|++++.+...... .+|+++.++ ..+++| +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-----g~~~Le----~~l 83 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYNDI-----GRDSLD----RVY 83 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTTCH-----HHHHHH----HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCCch-----hHHHHH----HHH
Confidence 3577887 5567888899999999999998 799999987644322 233433332 355565 469
Q ss_pred HHHcCCCCCCCcceEE--eCChHHHHHHHHhhhccCCCeEEecC-CCCCcccc--ccccCCccchhhhcccceEEeeeec
Q 015647 207 LKAFDLDSDNWGVNVQ--PYSCTSANFAVYTGLLLPGDRIMGLD-SPSGGHLS--HGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 207 a~lfg~~~~~~~v~V~--~~SGT~An~aal~all~pGD~VL~~~-~ehgghls--h~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
++++|++. +.++ ++|||+||.+++.++++|||+|++.+ ..|+++.. ++....+...+...| ++++.++.
T Consensus 84 A~l~g~e~----alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G--~~~~~v~~ 157 (427)
T 3hvy_A 84 ANIFNTES----AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYG--VKYKMVDL 157 (427)
T ss_dssp HHHHTCSE----EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGT--CEEEECCC
T ss_pred HHHhCCCc----eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcC--CEEEEecC
Confidence 99999987 3443 68999999999999999999999998 66665431 000000000112223 44555555
Q ss_pred CCCCCCCCHHHHHHHhcc-CCCcEEEEeC----CCC--CccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCC
Q 015647 282 NPQTGYIDYEKLEEKAMD-YRPKILICGG----SSY--PREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPF 352 (403)
Q Consensus 282 d~~~g~ID~d~Le~~i~~-~~pklViv~~----s~~--g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~ 352 (403)
+++.+|+++|++++++ .++|+|+++. +++ +.+.|+++|+++|++ +|++|++|++|+.|... ..|+
T Consensus 158 --~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~----~~p~ 231 (427)
T 3hvy_A 158 --KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEE----KEPT 231 (427)
T ss_dssp --BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSS----SCGG
T ss_pred --CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccC----CCCc
Confidence 3678999999999974 4789998876 443 367899999999999 89999999999877532 2344
Q ss_pred Cc-ccEEEEcCcCCCcC---CceEEEEEeCC
Q 015647 353 DY-CDIVTSTTHKSLRG---PRGGIIFFRRG 379 (403)
Q Consensus 353 ~~-aDivt~StHKtL~G---P~GG~I~~~~~ 379 (403)
.. +|++++|+||+|+| |.||+|+++++
T Consensus 232 ~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~ 262 (427)
T 3hvy_A 232 DVGADIIAGSLIKNIGGGIATTGGYIAGKEE 262 (427)
T ss_dssp GGTCSEEEEETTSGGGTTTCCSCEEEEECHH
T ss_pred ccCCeEEEECCcccccccccceEEEEEECHH
Confidence 43 89999999999988 78999998764
No 11
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.87 E-value=2.3e-21 Score=198.52 Aligned_cols=242 Identities=16% Similarity=0.128 Sum_probs=169.1
Q ss_pred hhhhhhhhhhhcCCCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHH
Q 015647 117 LESRRAGVRAWGNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYID 196 (403)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~ 196 (403)
||.++.+...+. +..-..++++-+++|.++|...+..++++|. ++|+++|......... .++...|..+....+
T Consensus 3 ~~~~~~m~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~-~~~~~gy~y~~~~~~ 76 (427)
T 3i16_A 3 LESTKQFLKKYN---INDRVLKLYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAH-FTNSSGYGYGDIGRD 76 (427)
T ss_dssp CHHHHHHHHTTT---CCHHHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGG-SCCCCTTCTTCHHHH
T ss_pred chHHHHHHHHcC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHh-cCCCCCCCCCHHHHH
Confidence 455555443332 2334567778888999999999999999998 7899998754211110 011222222344466
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEE--eCChHHHHHHHHhhhccCCCeEEecC-CCCCccccccccCCcc--chhhhcc
Q 015647 197 QIENLCFERALKAFDLDSDNWGVNVQ--PYSCTSANFAVYTGLLLPGDRIMGLD-SPSGGHLSHGYHTPGG--KKVSAAS 271 (403)
Q Consensus 197 ~lE~~arerla~lfg~~~~~~~v~V~--~~SGT~An~aal~all~pGD~VL~~~-~ehgghlsh~~~~~~~--~~v~~~g 271 (403)
++|+ ++++++|++. +.++ ++|||+||.+++.++++|||+|++.. ..|+++....-..+.+ ..+...|
T Consensus 77 ~Le~----~lA~l~g~e~----alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G 148 (427)
T 3i16_A 77 SLDA----VYARVFNTES----ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFG 148 (427)
T ss_dssp HHHH----HHHHHHTCSE----EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGT
T ss_pred HHHH----HHHHHhCCcc----eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcC
Confidence 6664 5999999987 3343 78999999999999999999999998 7766543100000000 0112223
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhcc-CCCcEEEEeC----CCC--CccccHHHHHHHHHH--cCCEEEEeccccccc
Q 015647 272 IFFESFPYKVNPQTGYIDYEKLEEKAMD-YRPKILICGG----SSY--PREWDYGRFRQIADK--CGAVLMCDMAHISGL 342 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~-~~pklViv~~----s~~--g~~~Di~~I~~Iake--~Ga~LivDaAh~~Gl 342 (403)
++++.+++++ ++.+|+++|++++++ .++|+|++.. .++ +.+.|+++|+++|++ +|+++++|++|+.+.
T Consensus 149 --~~~~~v~~~~-~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~ 225 (427)
T 3i16_A 149 --INYKQVDLKE-DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFM 225 (427)
T ss_dssp --CEEEECCCCT-TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTS
T ss_pred --CEEEEecCcc-CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCcccc
Confidence 4566666664 578999999999974 4689998876 333 467899999999999 999999999998775
Q ss_pred cccccccCCCC-cccEEEEcCcCCCcC---CceEEEEEeCC
Q 015647 343 IAAKELASPFD-YCDIVTSTTHKSLRG---PRGGIIFFRRG 379 (403)
Q Consensus 343 ia~g~~~~p~~-~aDivt~StHKtL~G---P~GG~I~~~~~ 379 (403)
.. ..|+. .+|++++|+||+|+| |.||+|+++++
T Consensus 226 ~~----~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~ 262 (427)
T 3i16_A 226 DT----KEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKD 262 (427)
T ss_dssp SS----SCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHH
T ss_pred cc----CCccccCCeEEEecCcccCCCCCCceEEEEEECHH
Confidence 32 23444 489999999999988 78999998864
No 12
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.83 E-value=9.9e-20 Score=185.29 Aligned_cols=224 Identities=16% Similarity=0.137 Sum_probs=159.4
Q ss_pred hHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCC
Q 015647 137 PEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDN 216 (403)
Q Consensus 137 ~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~ 216 (403)
-++++.++++.+++...+..+++.|. .+|+++|..........+ +.+.|..+....+++|+ ++++++|++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~n~--~~vl~a~~~~~~~~~~~~-~~~~~~y~~~~~~~Le~----~lA~l~g~e~-- 76 (409)
T 3jzl_A 6 QAIRKKVETQIDDLQNKTDEIAEFNQ--AKVLDAFQENKVSDFHFH-PSTGYGYDDEGRDTLER----VYATVFKTEA-- 76 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGGC-CCCTTCTTCHHHHHHHH----HHHHHHTCSE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHhhhhhhccC-CCcCCCCChhHHHHHHH----HHHHHhCCCc--
Confidence 47888889999999999999999985 688998876542211111 12223334444556664 5899999987
Q ss_pred CcceEE--eCChHHHHHHHHhhhccCCCeEEecC-CCCCccccccccCC-ccchhhhcccceEEeeeecCCCCCCCCHHH
Q 015647 217 WGVNVQ--PYSCTSANFAVYTGLLLPGDRIMGLD-SPSGGHLSHGYHTP-GGKKVSAASIFFESFPYKVNPQTGYIDYEK 292 (403)
Q Consensus 217 ~~v~V~--~~SGT~An~aal~all~pGD~VL~~~-~ehgghlsh~~~~~-~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~ 292 (403)
+.++ ++|||+||.+++.++++|||+|++.. ..|++.....-+.. +...+...| +++..+++++ ++.+|+++
T Consensus 77 --alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G--~~~~~v~~~~-~g~~d~e~ 151 (409)
T 3jzl_A 77 --ALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFH--IGYSSVPLLE-NGDVDFPR 151 (409)
T ss_dssp --EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGT--CEEEECCCCT-TSCCCHHH
T ss_pred --EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcC--CEEEEeCCCC-CCCcCHHH
Confidence 3444 68999999999999999999999987 66554321000000 000112223 4566667664 68899999
Q ss_pred HHHHhccCCCcEEEEeC----CC--CCccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCCC-cccEEEEcCc
Q 015647 293 LEEKAMDYRPKILICGG----SS--YPREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTH 363 (403)
Q Consensus 293 Le~~i~~~~pklViv~~----s~--~g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StH 363 (403)
|++++++ ++|+|++.. .+ ++.+.|+++|.++|++ +|+++++|++|+.+... ..|.. .+|++++|+|
T Consensus 152 l~~ai~~-~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~----~~p~~~g~Div~~S~s 226 (409)
T 3jzl_A 152 IAKKMTP-KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEY----QEPPEVGADIIAGSLI 226 (409)
T ss_dssp HHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSS----CCSGGGTCSEEEEETT
T ss_pred HHHhccC-CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccccccc----CCccccCCeEEEECcc
Confidence 9999974 689998876 33 4678899999999999 99999999999876521 13343 4899999999
Q ss_pred CCCcC---CceEEEEEeCC
Q 015647 364 KSLRG---PRGGIIFFRRG 379 (403)
Q Consensus 364 KtL~G---P~GG~I~~~~~ 379 (403)
|+|+| +.||+|+++++
T Consensus 227 K~lgg~~~~~GG~v~~~~~ 245 (409)
T 3jzl_A 227 KNPGGGLAKTGGYIAGKEA 245 (409)
T ss_dssp SGGGTTTCSSCEEEEECHH
T ss_pred ccCCccCCceEEEEEeCHH
Confidence 99977 56899998764
No 13
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.82 E-value=1.1e-19 Score=176.83 Aligned_cols=205 Identities=18% Similarity=0.166 Sum_probs=148.5
Q ss_pred ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh
Q 015647 158 ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al 237 (403)
++..++++.|++++...+...+ ++|+..|..+..... +.+.+++++++++|++++ ..+++++||+|+.+++.++
T Consensus 7 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~---~i~~~~g~~~a~~~~~~~~ 80 (382)
T 4hvk_A 7 TSAKPVDERILEAMLPYMTESF--GNPSSVHSYGFKARE-AVQEAREKVAKLVNGGGG---TVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp TTCCCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHHHH-HHHHHHHHHHHHTTCTTE---EEEEESSHHHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHHhhc--CCCcccchHHHHHHH-HHHHHHHHHHHHcCCCcC---eEEEECCchHHHHHHHHHh
Confidence 4567889999999998887644 566654433333333 334478889999999864 1344557889999999998
Q ss_pred c----cCCCeEEecCCCCCccccccccCCccchhhhc-ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC-
Q 015647 238 L----LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA-SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS- 311 (403)
Q Consensus 238 l----~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~-g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~- 311 (403)
+ ++||+|++...+|.+... .+... ..+++++.+++++ ++.+|+++|++++++ ++++|++...+
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~---------~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~~n 149 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVIN---------PAKFLQKQGFEVEYIPVGK-YGEVDVSFIDQKLRD-DTILVSVQHANN 149 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHH---------HHHHHHHTTCEEEEECBCT-TSCBCHHHHHHHCCT-TEEEEECCSBCT
T ss_pred hhhhcCCCCEEEECCCCcHHHHH---------HHHHHHhcCCEEEEeccCC-CCCcCHHHHHHHhcc-CceEEEEECCCC
Confidence 7 999999999888755431 11111 1234566677764 678999999999874 67888776433
Q ss_pred -CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCCCCCcccC
Q 015647 312 -YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRGKKPRKQG 386 (403)
Q Consensus 312 -~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~~~~~~~~ 386 (403)
+|...|+++|.++|+++|+ +++|++|+.|.... ++. .+|++++|+||+ .||.| |+++.++...+.+..
T Consensus 150 ptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~-----~~~~~~~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~ 221 (382)
T 4hvk_A 150 EIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEV-----DVEKIGADMLTISSNDI-YGPKGVGALWIRKEAKLQPVI 221 (382)
T ss_dssp TTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCC-----CHHHHTCSEEEEESGGG-TSCTTCEEEEEETTCCCCCSS
T ss_pred CceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCC-----CchhcCCCEEEEeHHHh-cCCCceEEEEEcCccCcCccc
Confidence 5788999999999999999 99999999876532 122 379999999996 57775 888887765444433
No 14
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.82 E-value=1.2e-19 Score=177.33 Aligned_cols=196 Identities=14% Similarity=0.115 Sum_probs=142.2
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCC--CCCcceEEeCChHHHH
Q 015647 153 GIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDS--DNWGVNVQPYSCTSAN 230 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~--~~~~v~V~~~SGT~An 230 (403)
.+.+.+++..+++.|++++...+...+ +... ..+.+.+++++++++|++. + ..++++|||+|+
T Consensus 3 ~~~~~~gp~~~~~~v~~a~~~~~~~~~-----------~~~~-~~~~~~~~~~la~~~~~~~~~~---~v~~~~g~t~al 67 (384)
T 3zrp_A 3 KLLLHVGPTTIKEDVLVAGLENNVGFT-----------SKEF-VEALAYSLKGLRYVMGASKNYQ---PLIIPGGGTSAM 67 (384)
T ss_dssp ---CCSSCSCCCHHHHHHTTCCSCCTT-----------SHHH-HHHHHHHHHHHHHHHTCCTTSE---EEEEESCHHHHH
T ss_pred ceeccCCCCCCCHHHHHHhhccccccc-----------cHHH-HHHHHHHHHHHHHHhCCCCCCc---EEEEcCCcHHHH
Confidence 467889999999999999875442211 1222 3333446888999999986 3 235566789999
Q ss_pred HHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015647 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 231 ~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
. ++.+++++||+|++....|.+. .+ ...+...| .+++.+++++ ++.+|+++|+++++++++++|++...
T Consensus 68 ~-~~~~~~~~gd~vi~~~~~~~~~---~~----~~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~ 136 (384)
T 3zrp_A 68 E-SVTSLLKPNDKILVVSNGVFGD---RW----EQIFKRYP--VNVKVLRPSP-GDYVKPGEVEEEVRKSEYKLVALTHV 136 (384)
T ss_dssp H-HGGGGCCTTCEEEEECSSHHHH---HH----HHHHTTSS--CEEEEECCST-TCCCCHHHHHHHHHHSCEEEEEEESE
T ss_pred H-HHHhhcCCCCEEEEecCCcchH---HH----HHHHHHcC--CcEEEecCCC-CCCCCHHHHHHHHHhCCCcEEEEeCC
Confidence 9 9999999999999987654221 00 01112223 4566667764 57899999999998767888877643
Q ss_pred --CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 311 --SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 --~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|...|+++|.++|+++|+++++|++|+.|.... ++. .+|++++|+||+|.||.| |+++.+++
T Consensus 137 ~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-----~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~ 205 (384)
T 3zrp_A 137 ETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEV-----KAEEWNVDVYLTASQKALGSAAGLGLLLLSPK 205 (384)
T ss_dssp ETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCC-----CTTTTTCSEEEEETTSTTCCCSSEEEEEECHH
T ss_pred CCCCceECcHHHHHHHHHhcCCEEEEECcccccCccc-----cccccCCCEEEecCcccccCCCceEEEEECHH
Confidence 35788999999999999999999999999876532 222 389999999999987776 88887654
No 15
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.81 E-value=2.4e-19 Score=183.45 Aligned_cols=231 Identities=16% Similarity=0.123 Sum_probs=159.6
Q ss_pred CCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC
Q 015647 132 LPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD 211 (403)
Q Consensus 132 l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg 211 (403)
+.....++.+.+++|.++|...+..++..| .++|++++......... ..+...|..+....+++| +++++++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n--~~~vl~A~~~~~~~~~~-~~~~~g~~y~~~~~~~l~----~~la~~~g 79 (431)
T 3ht4_A 7 NGEKIAPIVKEVESQITEVHKRADEVIESN--QFRVLESFGKHKISDSH-FIPTTGYGYDDIGRDTLE----KVYADVFG 79 (431)
T ss_dssp TTTTSHHHHHHHHHHTHHHHHHHHHHHHHH--HHHHHHHHHHTTCCGGG-SCCCCTTCCSCHHHHHHH----HHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhchhhhh-cCCCCCCCCChhhHHHHH----HHHHHHhC
Confidence 344556777777788889999999998887 46888888764221111 111222222344444444 46999999
Q ss_pred CCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecC-CCCCccccccccCCcc-chhhhcccceEEeeeecCCCCCCCC
Q 015647 212 LDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLD-SPSGGHLSHGYHTPGG-KKVSAASIFFESFPYKVNPQTGYID 289 (403)
Q Consensus 212 ~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~-~ehgghlsh~~~~~~~-~~v~~~g~~~~vv~~~vd~~~g~ID 289 (403)
++.+. +.++++|||+||.+++.++++|||+|++.. ..|++......+.... ..+... +.+++.+++++ ++.+|
T Consensus 80 ~~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~--G~~~~~v~~~~-~~~~d 154 (431)
T 3ht4_A 80 AEAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEY--NIGYNAVPLTE-GGLVD 154 (431)
T ss_dssp CSEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGG--TCEEEECCBCT-TSSBC
T ss_pred CCccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHc--CCEEEEeCCCC-CCCcC
Confidence 98642 123467999999999999999999999987 6665543110000000 001112 34667777765 57899
Q ss_pred HHHHHHHhccCCCcEEEEeC-C-----CCCccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCCC-cccEEEE
Q 015647 290 YEKLEEKAMDYRPKILICGG-S-----SYPREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPFD-YCDIVTS 360 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~-s-----~~g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~ 360 (403)
+++|++++++ ++++|++.. . ..+...|+++|+++|++ +|++|++|++|+.+.... .++. .+|++++
T Consensus 155 ~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~----~~~~~g~Di~~~ 229 (431)
T 3ht4_A 155 FEAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQ----EPCHVGADLMAG 229 (431)
T ss_dssp HHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSC----CGGGTTCSEEEE
T ss_pred HHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCC----CccccCCeEEEc
Confidence 9999999974 689988874 2 23456789999999999 999999999998875321 2333 3899999
Q ss_pred cCcCCCcC---CceEEEEEeCC
Q 015647 361 TTHKSLRG---PRGGIIFFRRG 379 (403)
Q Consensus 361 StHKtL~G---P~GG~I~~~~~ 379 (403)
|+||+|+| |.||+++++++
T Consensus 230 S~sK~lgg~~~~~GG~v~~~~~ 251 (431)
T 3ht4_A 230 SLIKNPGGGIVKTGGYIVGKEQ 251 (431)
T ss_dssp ETTSGGGTTTCSSCEEEEECHH
T ss_pred CccccCCCCCCCceEEEEecHH
Confidence 99999876 88999998764
No 16
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.81 E-value=2e-19 Score=177.94 Aligned_cols=201 Identities=16% Similarity=0.138 Sum_probs=145.0
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015647 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
..+.+.|++..++++|++++...+.. + + ...+. .+...+++++++++|++... ..++..||++|+.
T Consensus 13 ~~~~~~pgp~~~~~~v~~a~~~~~~~-----~-----~-~~~~~-~~~~~~~~~la~~~~~~~~~--~v~~~~sgt~al~ 78 (411)
T 3nnk_A 13 SRLLMGPGPINADPRVLRAMSSQLIG-----Q-----Y-DPAMT-HYMNEVMALYRGVFRTENRW--TMLVDGTSRAGIE 78 (411)
T ss_dssp CCEEESSSCCCCCHHHHHHHTSCCCC-----T-----T-CHHHH-HHHHHHHHHHHHHHTCCCSE--EEEEESCHHHHHH
T ss_pred cceeecCCCCCCCHHHHHHhhccccc-----c-----c-cHHHH-HHHHHHHHHHHHHhCCCCCc--EEEECCCcHHHHH
Confidence 45778899999999999998753211 1 1 12222 33344688899999998742 1234457899999
Q ss_pred HHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC-
Q 015647 232 AVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS- 310 (403)
Q Consensus 232 aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s- 310 (403)
+++.+++++||+|++....|.+.. +. ..+...| ++++.++++ +++.+|+++|++++++.++++|++...
T Consensus 79 ~~~~~~~~~gd~Vl~~~~~~~~~~---~~----~~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 148 (411)
T 3nnk_A 79 AILVSAIRPGDKVLVPVFGRFGHL---LC----EIARRCR--AEVHTIEVP-WGEVFTPDQVEDAVKRIRPRLLLTVQGD 148 (411)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHH---HH----HHHHHTT--CEEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHHHhcCCCCEEEEecCCchHHH---HH----HHHHHcC--CeEEEEecC-CCCCCCHHHHHHHHhhCCCeEEEEeCCC
Confidence 999999999999999987653321 10 1222334 455666665 367899999999998657898877643
Q ss_pred -CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 311 -SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 -~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|...|+++|.++|+++|+++++|++|+.|..+..... ..+|++++|+||+|.||.| |+++.+++
T Consensus 149 nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~---~~~d~~~~s~~K~l~~~~g~g~~~~~~~ 216 (411)
T 3nnk_A 149 TSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDV---WGLDAVSAGMQKCLGGPSGTSPITLSAR 216 (411)
T ss_dssp TTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTT---TTCSEEECCSTTTTCCCSSEEEEEECHH
T ss_pred CCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhc---cCCcEEEecCccccCCCCceEEEEECHH
Confidence 357889999999999999999999999998765322110 1389999999999888877 88877653
No 17
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.81 E-value=3e-19 Score=176.31 Aligned_cols=201 Identities=19% Similarity=0.170 Sum_probs=145.4
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhh
Q 015647 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTG 236 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~a 236 (403)
.++...+++.|++++...+...+ ++++..|..+......++ .+++++++++|++++ ..+++++||+|+.+++.+
T Consensus 26 ~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~l~~~la~~~~~~~~---~v~~~~g~t~al~~~~~~ 99 (400)
T 3vax_A 26 AAATTRVDQRVADIVLHWMTAEF--GNAGSRHEYGIRAKRGVE-RAREYLASTVSAEPD---ELIFTSGATESNNIALLG 99 (400)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHHHHHHHHHHH-HHHHHHHHHTTCCGG---GEEEESCHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHhcc--CCCcccchhHHHHHHHHH-HHHHHHHHHcCCCCC---cEEEeCCHHHHHHHHHHH
Confidence 34566789999999998887654 455554433333333333 468889999999864 234556789999999999
Q ss_pred hc----cCCC-eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC
Q 015647 237 LL----LPGD-RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311 (403)
Q Consensus 237 ll----~pGD-~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~ 311 (403)
++ ++|| +|++...+|.+..... ..+. ..+.+++.+++++ ++.+|+++|++++.+ ++++|++...+
T Consensus 100 l~~~~~~~gd~~Vl~~~~~~~~~~~~~------~~~~--~~g~~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~~ 169 (400)
T 3vax_A 100 LAPYGERTGRRHIITSAIEHKAVLEPL------EHLA--GRGFEVDFLTPGP-SGRISVEGVMERLRP-DTLLVSLMHVN 169 (400)
T ss_dssp THHHHHHHTCCEEEEETTSCHHHHHHH------HHHH--TTTCEEEEECCCT-TCCCCHHHHHTTCCT-TEEEEECCSBC
T ss_pred HHHhhccCCCCEEEECccccHhHHHHH------HHHH--hcCCeEEEEccCC-CCCcCHHHHHHhcCC-CceEEEEECCC
Confidence 98 8999 9999988765543110 1111 1234666677764 688999999999874 67888776443
Q ss_pred --CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEE-EeC
Q 015647 312 --YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIF-FRR 378 (403)
Q Consensus 312 --~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~-~~~ 378 (403)
+|...|+++|.++|+++|+++++|++|+.|..+.+. ..+ +|++++|+|| +.||.| |+++ .++
T Consensus 170 nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~--~~~--~d~~~~s~~K-~~g~~g~g~~~~~~~ 235 (400)
T 3vax_A 170 NETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDL--TTP--IDMISISGHK-IGAPKGVGALVTRRR 235 (400)
T ss_dssp TTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGG--GSC--CSEEEEETGG-GTSCSSCEEEEECBC
T ss_pred CCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcCh--hhc--CcEEEEeHHH-hCCCCceEEEEEecc
Confidence 577899999999999999999999999987654321 111 7999999999 567876 7777 766
No 18
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.81 E-value=5.7e-19 Score=172.67 Aligned_cols=203 Identities=18% Similarity=0.186 Sum_probs=146.2
Q ss_pred ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh
Q 015647 158 ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al 237 (403)
++...+++.|++++...+.+.+ +++++.|..+......++ .+++++++++|++++ ..++++|||+|+.+++.++
T Consensus 7 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~l 80 (382)
T 4eb5_A 7 TSAKPVDERILEAMLPYMTESF--GNPSSVHSYGFKAREAVQ-EAREKVAKLVNGGGG---TVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp TTCCCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHHHHHHH-HHHHHHHHHHTCTTE---EEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhcc--CCCCCCcHHHHHHHHHHH-HHHHHHHHHhCCCCC---eEEEcCchHHHHHHHHHHH
Confidence 4556889999999998876533 566654543333333333 468889999999753 2345567899999999998
Q ss_pred c----cCCCeEEecCCCCCccccccccCCccchhhh-cccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC-
Q 015647 238 L----LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSA-ASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS- 311 (403)
Q Consensus 238 l----~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~-~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~- 311 (403)
. ++||+|++....|.+... .+.. ...+++++.+++++ ++.+|+++|++++++ ++++|++...+
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~~---------~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~~n 149 (382)
T 4eb5_A 81 AMRNARKGKHILVSAVEHMSVIN---------PAKFLQKQGFEVEYIPVGK-YGEVDVSFIDQKLRD-DTILVSVQHANN 149 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHH---------HHHHHTTTTCEEEEECBCT-TSCBCHHHHHHHCCT-TEEEEECCSBCT
T ss_pred HhhccCCCCEEEECCCcchHHHH---------HHHHHHhCCcEEEEeccCC-CCccCHHHHHHHhcC-CCeEEEEeccCC
Confidence 7 899999999887644321 1111 11234666777764 678999999999874 67887776443
Q ss_pred -CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCCCCCcc
Q 015647 312 -YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRGKKPRK 384 (403)
Q Consensus 312 -~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~~~~~~ 384 (403)
+|...|+++|.++|+++|++ ++|++|+.|..+. ++. .+|++++|+||+ .||.| |+++++++..+.+
T Consensus 150 ptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~-----~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~~ 219 (382)
T 4eb5_A 150 EIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEV-----DVEKIGADMLTISSNDI-YGPKGVGALWIRKEAKLQP 219 (382)
T ss_dssp TTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCC-----CHHHHTCSEEEEETGGG-TCCSSCEEEEEETTCCCCC
T ss_pred CccccCCHHHHHHHHHHCCCE-EEEcchhcCCccc-----CccccCCCEEEeehHHh-cCCCceEEEEEccccccCc
Confidence 47889999999999999999 9999999775421 122 379999999997 67876 8888877643433
No 19
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.81 E-value=4.5e-19 Score=175.72 Aligned_cols=200 Identities=16% Similarity=0.091 Sum_probs=144.7
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceE-EeCChHHHH
Q 015647 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNV-QPYSCTSAN 230 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V-~~~SGT~An 230 (403)
..+.+.+++..++++|++++..... + ++ .... .++...+++++++++|++.+ ..+ ++.|||+|+
T Consensus 11 ~~~~~~p~p~~~~~~v~~a~~~~~~-----~-----~~-~~~~-~~~~~~l~~~la~~~g~~~~---~~~~~~~s~t~al 75 (416)
T 3isl_A 11 LRTIMTPGPVEVDPRVLRVMSTPVV-----G-----QF-DPAF-TGIMNETMEMLRELFQTKNR---WAYPIDGTSRAGI 75 (416)
T ss_dssp CCEECSSSSCCCCHHHHHHTTSCCC-----C-----TT-SHHH-HHHHHHHHHHHHHHTTCCCS---EEEEEESCHHHHH
T ss_pred cceeecCCCcCcCHHHHHHhcccCC-----C-----Cc-cHHH-HHHHHHHHHHHHHHhCCCCC---cEEEecCcHHHHH
Confidence 4567888889999999998764211 1 11 1122 33444568889999999874 233 456789999
Q ss_pred HHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015647 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 231 ~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
.+++.+++++||+|++....|.++. +. ..+...| .+++.+++++ ++.+|+++|++++++.++++|++...
T Consensus 76 ~~~~~~l~~~gd~Vl~~~~~~~~~~---~~----~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~ 145 (416)
T 3isl_A 76 EAVLASVIEPEDDVLIPIYGRFGYL---LT----EIAERYG--ANVHMLECEW-GTVFDPEDIIREIKKVKPKIVAMVHG 145 (416)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHH---HH----HHHHHTT--CEEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESE
T ss_pred HHHHHHhcCCCCEEEEecCCcccHH---HH----HHHHhcC--CeeEEEecCC-CCCCCHHHHHHHHhhCCCcEEEEEcc
Confidence 9999999999999999886643311 10 1123334 4566666764 57899999999998557898877643
Q ss_pred --CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 311 --SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 --~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|...|+++|.++|+++|+++++|++|+.|....+... ..+|++++|+||+|.||.| |+++.+++
T Consensus 146 ~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~l~g~~g~g~~~~~~~ 214 (416)
T 3isl_A 146 ETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDE---WKIDAAIGGTQKCLSVPSGMAPITYNER 214 (416)
T ss_dssp ETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTT---TTCSEEECCSSSTTCCCSSEEEEEECHH
T ss_pred CCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhh---cCCCEEEecCccccCCCCCeEEEEECHH
Confidence 367889999999999999999999999998865322110 1389999999999888887 77777653
No 20
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.80 E-value=2.4e-18 Score=178.60 Aligned_cols=225 Identities=13% Similarity=0.046 Sum_probs=156.2
Q ss_pred hHHHHHHHHHHHhhhcccceecc--CccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC-
Q 015647 137 PEIFDIMEKEKQRQFKGIELIAS--ENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD- 213 (403)
Q Consensus 137 ~ei~~li~~e~~rq~~~l~LiaS--en~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~- 213 (403)
.+++++++++.....+....+++ +++++|.+.+++...+...+ +++ ...+...++|+.+++++++++|++
T Consensus 40 ~~~~~~~~~~i~l~gnp~~~l~s~~t~~~~~~v~~~l~~~~~~~~--~~~-----~~~p~~~~le~~~~~~la~l~g~~~ 112 (502)
T 3hbx_A 40 EAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNY--VDM-----DEYPVTTELQNRCVNMIAHLFNAPL 112 (502)
T ss_dssp HHHHHHHHHHGGGSCCGGGBTTCCSCCCCCHHHHHHHHHTTTCBT--TCT-----TTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhccCCCCCceeccccCCCCCHHHHHHHHHHhccCC--CCh-----hcChhHHHHHHHHHHHHHHHhCCCc
Confidence 46777777765443332222333 46779999999987765433 121 123456789988999999999998
Q ss_pred -CCCCcceEEeCChHHHHHHHHhhhccC--------CC-----eEEecCCCCCccccccccCCccchhhhcccceEEeee
Q 015647 214 -SDNWGVNVQPYSCTSANFAVYTGLLLP--------GD-----RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY 279 (403)
Q Consensus 214 -~~~~~v~V~~~SGT~An~aal~all~p--------GD-----~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~ 279 (403)
++.....+++++||+||+.++.++..+ || +|+++...|... . +.+...|. +++.+
T Consensus 113 ~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~------~---~~~~~~G~--~~~~v 181 (502)
T 3hbx_A 113 EEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCW------E---KFARYFEV--ELKEV 181 (502)
T ss_dssp CSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHH------H---HHHHHTTC--EEEEE
T ss_pred ccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHH------H---HHHHHcCc--eeEEE
Confidence 332223345778999999998887654 77 898887654221 1 23344453 45566
Q ss_pred ecCCCCCCCCHHHHHHHhccCCCcEEEEeC--CCCCccccHHHHHHHHHHc------CCEEEEeccccccccc--ccccc
Q 015647 280 KVNPQTGYIDYEKLEEKAMDYRPKILICGG--SSYPREWDYGRFRQIADKC------GAVLMCDMAHISGLIA--AKELA 349 (403)
Q Consensus 280 ~vd~~~g~ID~d~Le~~i~~~~pklViv~~--s~~g~~~Di~~I~~Iake~------Ga~LivDaAh~~Glia--~g~~~ 349 (403)
+++++++.+|+++|++++.+ +|++|++.. +.+|.+.|+++|.++|+++ |++||+|+||+.+..+ .+..+
T Consensus 182 ~~~~~~~~~d~~~l~~~i~~-~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~ 260 (502)
T 3hbx_A 182 KLSEGYYVMDPQQAVDMVDE-NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELE 260 (502)
T ss_dssp CCBTTBCSCCHHHHHHHCCT-TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC
T ss_pred ecCCCcCcCCHHHHHHHHhh-CCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccc
Confidence 66654588999999999975 577776543 3457889999999999999 9999999999866532 12222
Q ss_pred CCC--CcccEEEEcCcCCCcCCce-EEEEEeCCC
Q 015647 350 SPF--DYCDIVTSTTHKSLRGPRG-GIIFFRRGK 380 (403)
Q Consensus 350 ~p~--~~aDivt~StHKtL~GP~G-G~I~~~~~~ 380 (403)
..+ ..+|++++++||++.+|.| |++++++..
T Consensus 261 ~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~ 294 (502)
T 3hbx_A 261 WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 294 (502)
T ss_dssp CSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGG
T ss_pred cccCCCCceEEEECcccccCCCCCeEEEEEeCHH
Confidence 222 2599999999999988877 888887653
No 21
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.80 E-value=2.6e-18 Score=167.80 Aligned_cols=203 Identities=18% Similarity=0.188 Sum_probs=144.3
Q ss_pred ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh
Q 015647 158 ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al 237 (403)
++...+++.|++++...+.+.| ++++..+..+......++ ..++++++++|++++ ..+++++||+|+.+++.++
T Consensus 8 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~~ 81 (384)
T 1eg5_A 8 NATTRVDDRVLEEMIVFYREKY--GNPNSAHGMGIEANLHME-KAREKVAKVLGVSPS---EIFFTSCATESINWILKTV 81 (384)
T ss_dssp TTCCCCCHHHHHHHHHHHHTCC--CCTTCSSHHHHHHHHHHH-HHHHHHHHHHTSCGG---GEEEESCHHHHHHHHHHHH
T ss_pred CccCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHHHH-HHHHHHHHHcCCCCC---eEEEECCHHHHHHHHHHhh
Confidence 3445789999999998887655 345443322333333333 467889999998754 2345567899999999998
Q ss_pred c----cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--
Q 015647 238 L----LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-- 311 (403)
Q Consensus 238 l----~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-- 311 (403)
. ++||+|++....|.+..... ..+...| .+++.+++++ ++.+|+++|++++++ ++++|++...+
T Consensus 82 ~~~~~~~gd~vl~~~~~~~~~~~~~------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~~np 151 (384)
T 1eg5_A 82 AETFEKRKRTIITTPIEHKAVLETM------KYLSMKG--FKVKYVPVDS-RGVVKLEELEKLVDE-DTFLVSIMAANNE 151 (384)
T ss_dssp HHHTTTTCCEEEECTTSCHHHHHHH------HHHHHTT--CEEEECCBCT-TSCBCHHHHHHHCCT-TEEEEEEESBCTT
T ss_pred hhhccCCCCEEEECCCCchHHHHHH------HHHHhcC--CEEEEEccCC-CCccCHHHHHHHhCC-CCeEEEEECCCCC
Confidence 7 79999999987765432100 0112233 4566667764 578999999999875 67888776443
Q ss_pred CCccccHHHHHHHHHHcC--CEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCCC
Q 015647 312 YPREWDYGRFRQIADKCG--AVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRGK 380 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~G--a~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~~ 380 (403)
+|...|+++|.++|+++| +++++|++|+.|..+.+. ..+ .+|++++|+||+ .||.| |+++++++.
T Consensus 152 tG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~--~~~-~~di~~~s~sK~-~g~~G~G~~~~~~~~ 219 (384)
T 1eg5_A 152 VGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSL--EKL-EVDYASFSAHKF-HGPKGVGITYIRKGV 219 (384)
T ss_dssp TCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCC--TTT-CCSEEEEEGGGG-TSCTTCEEEEECTTS
T ss_pred cccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCc--hhc-CCCEEEecHHHh-cCCCceEEEEEcCCC
Confidence 478899999999999999 999999999876532211 111 389999999997 57877 999988753
No 22
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.80 E-value=9.4e-19 Score=173.41 Aligned_cols=202 Identities=11% Similarity=0.035 Sum_probs=143.6
Q ss_pred ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh
Q 015647 158 ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al 237 (403)
++...+++.|++++...+...+ ++++..|..|......++ .+++++++++|++++ ..++.+++|+++.+++.++
T Consensus 33 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~l~~~la~~~g~~~~---~v~~~~g~t~al~~~~~~l 106 (406)
T 3cai_A 33 PAGMLIPDSVATTVSTAFRRSG--ASTVGAHPSARRSAAVLD-AAREAVADLVNADPG---GVVLGADRAVLLSLLAEAS 106 (406)
T ss_dssp GGCCCCCHHHHHHHHHHHHHCC--SSSCSSSHHHHHHHHHHH-HHHHHHHHHHTCCGG---GEEEESCHHHHHHHHHHHT
T ss_pred CCcCCCCHHHHHHHHHHHHhcC--CCCCCccHHHHHHHHHHH-HHHHHHHHHhCCCCC---eEEEeCChHHHHHHHHHHH
Confidence 3445789999999998876543 355544433333333344 468889999999753 2344556788999988887
Q ss_pred ---ccCCCeEEecCCCCCccccccccCCccchhhh-cc-cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC-
Q 015647 238 ---LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSA-AS-IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS- 311 (403)
Q Consensus 238 ---l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~-~g-~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~- 311 (403)
+++||+|++....|.+... .+.. .. .+++++.++++++++.+|+++|++++.+ ++++|++...+
T Consensus 107 ~~~~~~gd~vi~~~~~~~~~~~---------~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n 176 (406)
T 3cai_A 107 SSRAGLGYEVIVSRLDDEANIA---------PWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISK-STRLVAVNSASG 176 (406)
T ss_dssp GGGGBTTCEEEEETTSCGGGTH---------HHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCT-TEEEEEEESBCT
T ss_pred hhccCCCCEEEEcCCccHHHHH---------HHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCC-CceEEEEeCCcC
Confidence 7899999999888765431 1111 00 1345666777655788999999999874 67888776433
Q ss_pred -CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceE-EEEEeCC
Q 015647 312 -YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGG-IIFFRRG 379 (403)
Q Consensus 312 -~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG-~I~~~~~ 379 (403)
+|...|+++|.++|+++|+++++|++|+.|..+.... .+ .+|++++|+||++ ||.+| +++++++
T Consensus 177 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~--~~-~~d~~~~s~~K~~-g~~~G~~~~~~~~ 242 (406)
T 3cai_A 177 TLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIR--ET-DADVVTVNAHAWG-GPPIGAMVFRDPS 242 (406)
T ss_dssp TTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHH--HH-CCSEEEEEGGGGT-SCSCEEEEESCHH
T ss_pred CccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCch--hc-CCCEEEeehhhhc-CCCcCeEEEEehH
Confidence 5788999999999999999999999999876432110 01 3899999999975 67777 8887764
No 23
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.79 E-value=1.7e-20 Score=189.81 Aligned_cols=199 Identities=12% Similarity=0.043 Sum_probs=131.7
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCCCCCCCC---ccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe--CChH
Q 015647 153 GIELIASENFVCRAVMEALGSHLTNKYSEGYPGA---RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP--YSCT 227 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgs---r~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~--~SGT 227 (403)
...+.|+++.++++|+++|..++.+.+ |++.+ .++.+.++.+.+|+ +|++++++||++.. -.|+| .+||
T Consensus 28 ~yl~~agpt~~p~~V~~a~~~~~~~~~--~n~~s~~~~~h~~~~~~~~~~~-ar~~la~ll~~~~~---~evif~t~~~T 101 (386)
T 3qm2_A 28 VFNFSSGPAMLPAEVLKLAQQELCDWH--GLGTSVMEISHRGKEFIQVAEE-AEQDFRDLLNIPSN---YKVLFCHGGGR 101 (386)
T ss_dssp CEECCSSSCCCCHHHHHHHTCC-------------------------CCHH-HHHHHHHHHTCCTT---EEEEEEESCTT
T ss_pred CccccCCCCCCCHHHHHHHHHHHHhcc--ccCccccccCCCCHHHHHHHHH-HHHHHHHHhCCCCC---ceEEEEcCCch
Confidence 456889999999999999998876644 45544 23445566666765 89999999999642 13554 4799
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecC-CCCCC-CCHHHHHHHhccCCCcEE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVN-PQTGY-IDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd-~~~g~-ID~d~Le~~i~~~~pklV 305 (403)
+|+++++.+++++||+|++.... +++|.++ ......| ++..++++ ++.|. +|+++++.++. .++++|
T Consensus 102 ~a~n~ai~~l~~~gd~v~~~~~~---~~~~~~~----~~a~~~G---~v~~v~~~~~~~G~~~~~~~~~~~l~-~~t~lV 170 (386)
T 3qm2_A 102 GQFAGVPLNLLGDKTTADYVDAG---YWAASAI----KEAKKYC---APQIIDAKITVDGKRAVKPMREWQLS-DNAAYL 170 (386)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESS---HHHHHHH----HHHTTTS---EEEEEECEEEETTEEEECCGGGCCCC-TTCSCE
T ss_pred HHHHHHHHhccCCCCeEEEEeCC---HHHHHHH----HHHHHhC---CeEEEecCcccCCCCCCchHHHhhcC-CCCcEE
Confidence 99999999999999998766543 4444321 1112223 34444554 11354 78888877775 368888
Q ss_pred EEeCCC--CCcc-ccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 306 ICGGSS--YPRE-WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 306 iv~~s~--~g~~-~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
++.... +|.. +|+++|+ +|+++++|++|++|.++. +++..|++++|+||++ ||.| |+++.+++
T Consensus 171 ~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pi-----dv~~~~~~~~s~hK~l-GP~G~g~l~v~~~ 237 (386)
T 3qm2_A 171 HYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPL-----DVSRYGVIYAGAQKNI-GPAGLTLVIVRED 237 (386)
T ss_dssp EECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCC-----CGGGCSEEEEETTTTT-CCTTEEEEEEEGG
T ss_pred EEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCC-----CccccCEEEEeccccc-CCCccEEEEECHH
Confidence 776543 4885 8888885 799999999999998643 2334578889999998 8999 88888875
No 24
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.79 E-value=1.5e-18 Score=171.48 Aligned_cols=189 Identities=15% Similarity=0.094 Sum_probs=138.7
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-ccC
Q 015647 162 FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-LLP 240 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l~p 240 (403)
.+++.+++++...+... .. .|+.+ +...+ .++++++++|.+. .|+++|||+|+.+++.++ +++
T Consensus 14 ~~~~~~~~a~~~~l~~~----~~--~~~~~-~~~~~----l~~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~ 77 (388)
T 1b9h_A 14 QYDDAERNGLVRALEQG----QW--WRMGG-DEVNS----FEREFAAHHGAAH-----ALAVTNGTHALELALQVMGVGP 77 (388)
T ss_dssp CCCHHHHHHHHHHHHTS----CC--BTTTC-SHHHH----HHHHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHHcC----Ce--eecCC-HHHHH----HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 35689999988877542 10 12222 22233 4567999999874 578889999999999999 899
Q ss_pred CCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHH
Q 015647 241 GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGR 320 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~ 320 (403)
||+|++....|.+.. ..+...| ++++.++++++++.+|+++|++++.+ ++++|+ -.+.+|.+.|+++
T Consensus 78 gd~Vi~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~-~~n~tG~~~~l~~ 144 (388)
T 1b9h_A 78 GTEVIVPAFTFISSS---------QAAQRLG--AVTVPVDVDAATYNLDPEAVAAAVTP-RTKVIM-PVHMAGLMADMDA 144 (388)
T ss_dssp TCEEEEESSSCTHHH---------HHHHHTT--CEEEEECBCTTTCCBCHHHHHHHCCT-TEEEEC-CBCGGGCCCCHHH
T ss_pred cCEEEECCCccHHHH---------HHHHHcC--CEEEEEecCCCcCCCCHHHHHHhcCc-CceEEE-EeCCccCcCCHHH
Confidence 999999998875542 1223333 46677778765678999999999864 577776 2334688899999
Q ss_pred HHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceEEEEEeCC
Q 015647 321 FRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 321 I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
|.++|+++|++||+|++|+.|....+.....+..+++.++|.||+|.|++||++++++.
T Consensus 145 i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~ 203 (388)
T 1b9h_A 145 LAKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG 203 (388)
T ss_dssp HHHHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred HHHHHHHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH
Confidence 99999999999999999999876533211112236677777889998999999998875
No 25
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.79 E-value=6.4e-19 Score=173.59 Aligned_cols=200 Identities=13% Similarity=0.078 Sum_probs=143.9
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEE-eCChHHHH
Q 015647 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQ-PYSCTSAN 230 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~-~~SGT~An 230 (403)
+.+.+.+++..+++.|++++...+...| ..........+++++++++|++++ ..|+ ++|||+|+
T Consensus 19 ~~~~~~~g~~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~g~~~~---~~i~~~~g~t~a~ 83 (393)
T 2huf_A 19 NKLLMGPGPSNAPQRVLDAMSRPILGHL------------HPETLKIMDDIKEGVRYLFQTNNI---ATFCLSASGHGGM 83 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTSCCCCTT------------SHHHHHHHHHHHHHHHHHHTCCCS---EEEEESSCHHHHH
T ss_pred CeEEecCCCCCCCHHHHHHHHhhhccCC------------CHHHHHHHHHHHHHHHHHhCCCCC---cEEEEcCcHHHHH
Confidence 4567788888899999999875442211 112233334578889999999763 1344 46789999
Q ss_pred HHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015647 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 231 ~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
.+++.+++++||+|++....|.+.. + ...+...| .+++.+++++ ++.+|+++|++++++.++++|++...
T Consensus 84 ~~~~~~~~~~gd~vl~~~~~~~~~~---~----~~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~ 153 (393)
T 2huf_A 84 EATLCNLLEDGDVILIGHTGHWGDR---S----ADMATRYG--ADVRVVKSKV-GQSLSLDEIRDALLIHKPSVLFLTQG 153 (393)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHH---H----HHHHHHTT--CEEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESE
T ss_pred HHHHHHHhCCCCEEEEECCCcchHH---H----HHHHHHcC--CeeEEEeCCC-CCCCCHHHHHHHHhccCCcEEEEEcc
Confidence 9999999999999999887654321 0 01112223 4566666664 56899999999997546888877643
Q ss_pred --CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 311 --SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 --~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|...|+++|.++|+++|+++++|++|..|..+.+. ..+ .+|++++|+||+|+||.| |+++++++
T Consensus 154 ~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~--~~~-~~d~~~~s~sK~l~g~~G~G~~~~~~~ 222 (393)
T 2huf_A 154 DSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFM--DRW-EIDAMYTGSQKVLGAPPGITPVSFSHR 222 (393)
T ss_dssp ETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCT--TTT-TCSEEECCSSSTTCCCSSCEEEEECHH
T ss_pred CCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcch--hhc-CccEEEECCCcccccCCCeEEEEECHH
Confidence 3578889999999999999999999999887643221 011 389999999999988887 88888653
No 26
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.78 E-value=3.3e-18 Score=170.33 Aligned_cols=201 Identities=18% Similarity=0.203 Sum_probs=144.0
Q ss_pred ccCccCcHHHHHHHHHHhh--hcCCCCCCCC-ccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHH
Q 015647 158 ASENFVCRAVMEALGSHLT--NKYSEGYPGA-RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVY 234 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~--~~y~eG~pgs-r~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal 234 (403)
++...+++.|++++...+. +.| ++|.. .+..+..... ..+.+++++++++|++++ -.+++++||+|+.+++
T Consensus 29 ~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~l~~~la~~~~~~~~---~v~~~~ggt~a~~~a~ 102 (423)
T 3lvm_A 29 SATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGWQAEE-AVDIARNQIADLVGADPR---EIVFTSGATESDNLAI 102 (423)
T ss_dssp TTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHHHHHH-HHHHHHHHHHHHHTCCGG---GEEEESSHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhHHHHH-HHHHHHHHHHHHcCCCCC---eEEEeCChHHHHHHHH
Confidence 4566789999999998776 444 55655 3333333333 334478889999999864 2345567899999999
Q ss_pred hhhcc----CCCeEEecCCCCCccccccccCCccchhhhc-ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015647 235 TGLLL----PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA-SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 235 ~all~----pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~-g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
.++++ +||+|++....|.+... .+... ..+++++.+++++ ++.+|+++|++++.+ ++++|++..
T Consensus 103 ~~l~~~~~~~gd~Vl~~~~~~~~~~~---------~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~ 171 (423)
T 3lvm_A 103 KGAANFYQKKGKHIITSKTEHKAVLD---------TCRQLEREGFEVTYLAPQR-NGIIDLKELEAAMRD-DTILVSIMH 171 (423)
T ss_dssp HHHHHHHTTTCCEEEEETTSCHHHHH---------HHHHHHHTTCEEEEECCCT-TSCCCHHHHHHHCCT-TEEEEECCS
T ss_pred HHHHHhhccCCCEEEECCccchHHHH---------HHHHHHHcCCEEEEeccCC-CCccCHHHHHHhcCC-CcEEEEEeC
Confidence 98874 89999999887755421 11111 1134566667765 688999999999975 678887764
Q ss_pred C--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 310 S--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
. .+|...|+++|.++|+++|++|++|++|+.|..+.... .+ .+|++++|+||+ .||.| |+++++++
T Consensus 172 ~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~--~~-~~di~~~s~sK~-~g~~g~G~~~~~~~ 240 (423)
T 3lvm_A 172 VNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLS--QL-KVDLMSFSGHKI-YGPKGIGALYVRRK 240 (423)
T ss_dssp BCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTT--TS-CCSEEEEESTTT-TSCSSCEEEEECBT
T ss_pred CCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChh--hc-CCCEEEechHHh-cCCCCeEEEEEecc
Confidence 3 35788999999999999999999999999876532111 11 389999999995 46665 88888764
No 27
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.78 E-value=2.5e-18 Score=168.39 Aligned_cols=196 Identities=16% Similarity=0.159 Sum_probs=142.5
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCChHHHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD-SDNWGVNVQPYSCTSANFA 232 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~-~~~~~v~V~~~SGT~An~a 232 (403)
....+++..+++.|++++...+.+.| +... ..+.+.+++++++++|++ .. ..++++|||+|+.+
T Consensus 22 ~l~~~~~~~~~~~v~~a~~~~~~~~~-----------~~~~-~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~a~~~ 86 (386)
T 2dr1_A 22 KLFTAGPVACFPEVLEIMKVQMFSHR-----------SKEY-RKVHMDTVERLREFLEVEKGE---VLLVPSSGTGIMEA 86 (386)
T ss_dssp EECCSSSCCCCHHHHHHTTSCCCCTT-----------SHHH-HHHHHHHHHHHHHHHTCSSSE---EEEESSCHHHHHHH
T ss_pred eeecCCCcCCcHHHHHHHhccccccc-----------CHHH-HHHHHHHHHHHHHHhCCCCCc---EEEEeCChHHHHHH
Confidence 44567788889999999875443211 1222 344445678899999997 32 23445678999999
Q ss_pred HHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc-CCCcEEEEeCC-
Q 015647 233 VYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD-YRPKILICGGS- 310 (403)
Q Consensus 233 al~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~-~~pklViv~~s- 310 (403)
++.+++++||+|++....|.++. +. ..+...| .+++.+++++ ++.+|+++|++++++ .++++|++...
T Consensus 87 ~~~~l~~~gd~vl~~~~~~~~~~---~~----~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 156 (386)
T 2dr1_A 87 SIRNGVSKGGKVLVTIIGAFGKR---YK----EVVESNG--RKAVVLEYEP-GKAVKPEDLDDALRKNPDVEAVTITYNE 156 (386)
T ss_dssp HHHHHSCTTCEEEEEESSHHHHH---HH----HHHHHTT--CEEEEEECCT-TCCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred HHHHhhcCCCeEEEEcCCchhHH---HH----HHHHHhC--CceEEEecCC-CCCCCHHHHHHHHhcCCCCcEEEEEeec
Confidence 99999999999999987654420 10 1122333 4566667764 577999999999963 46888877643
Q ss_pred -CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 311 -SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 -~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|.+.|+++|.++|+++|+++++|++|+.|.... ++. .+|++++|+||+|++|.| |+++++++
T Consensus 157 nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-----~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~ 224 (386)
T 2dr1_A 157 TSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADI-----KFDKWGLDVVFSSSQKAFGVPPGLAIGAFSER 224 (386)
T ss_dssp TTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCC-----CTTTTTCSEEEEETTSTTCCCSSCEEEEECHH
T ss_pred CCcchhCCHHHHHHHHHHcCCeEEEEccccccCccc-----cccccCCcEEEEeccccccCCCceEEEEECHH
Confidence 35778999999999999999999999999886432 222 379999999999988865 88888764
No 28
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.78 E-value=8e-19 Score=169.76 Aligned_cols=192 Identities=16% Similarity=0.029 Sum_probs=139.7
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
+.+.|++..+++.|++++...+.. .+ +....+.++ .+++++++++|++++ ..++++|||+|+.++
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~--------~~---~~~~~~~~~-~l~~~la~~~g~~~~---~i~~~~g~t~a~~~~ 67 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLH--------HR---TEAAREVFL-KARGLLREAFRTEGE---VLILTGSGTLAMEAL 67 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCC--------TT---SHHHHHHHH-HHHHHHHHHHTCSSE---EEEEESCHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCC--------cc---CHHHHHHHH-HHHHHHHHHhCCCCc---eEEEcCchHHHHHHH
Confidence 678899999999999999765421 11 122222233 467889999999753 234556899999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--
Q 015647 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-- 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-- 311 (403)
+.+++++||+|++....|.+.. .. ..+...| ++++.+++++ ++.+|+++|++ .++++|++...+
T Consensus 68 ~~~~~~~gd~vl~~~~~~~~~~-~~------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~----~~~~~v~~~~~~np 133 (352)
T 1iug_A 68 VKNLFAPGERVLVPVYGKFSER-FY------EIALEAG--LVVERLDYPY-GDTPRPEDVAK----EGYAGLLLVHSETS 133 (352)
T ss_dssp HHHHCCTTCEEEEEECSHHHHH-HH------HHHHHTT--CEEEEEECCT-TCCCCTTTSCC----SSCSEEEEESEETT
T ss_pred HHhccCCCCeEEEEeCCchhHH-HH------HHHHHcC--CceEEEeCCC-CCCCCHHHHhc----cCCcEEEEEEecCC
Confidence 9999999999999887654431 00 1112223 4566666664 56789998876 367888776443
Q ss_pred CCccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 312 YPREWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+|...|+++|.++|+++ |+++++|++|+.|..+.+ +. .+|++++|+||++.||.| |+++++++
T Consensus 134 tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-----~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~ 201 (352)
T 1iug_A 134 TGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVA-----LEAMGVDAAASGSQKGLMCPPGLGFVALSPR 201 (352)
T ss_dssp TTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCC-----SGGGTCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred cceecCHHHHHHHHHhhCCCCEEEEECCccccCccee-----ccccCeeEEEecCcccccCCCceeEEEECHH
Confidence 57889999999999999 999999999998754322 22 389999999999999887 88887654
No 29
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.78 E-value=1e-18 Score=171.08 Aligned_cols=204 Identities=15% Similarity=0.098 Sum_probs=142.1
Q ss_pred HHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEE-eC
Q 015647 146 EKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQ-PY 224 (403)
Q Consensus 146 e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~-~~ 224 (403)
|...-....++.|++..++++|++++...+... + +..+.+.+ +.+++++++++|++... -.++ ++
T Consensus 13 ~~~~~~~~~~~~pgp~~~~~~v~~a~~~~~~~~--------~---~~~~~~~~-~~~~~~la~~~g~~~~~--~~i~~~~ 78 (376)
T 3f0h_A 13 ENLYFQGMLNFTVGPVMSSEEVRAIGAEQVPYF--------R---TTEFSSTM-LENEKFMLEYAKAPEGS--KAVFMTC 78 (376)
T ss_dssp --CTTSSCEECSSSSCCCCHHHHHHHTSCCCCC--------S---SHHHHHHH-HHHHHHHHHHHTCCTTC--EEEEESS
T ss_pred ccccccCceeecCCCCCCcHHHHHHhcCCCCCC--------C---CHHHHHHH-HHHHHHHHHHhCCCCCc--eEEEEcC
Confidence 334445678899999999999999987543211 1 12222333 34678899999997421 1233 45
Q ss_pred ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcE
Q 015647 225 SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 225 SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pkl 304 (403)
|||+|+.+++.+++++||+|++....+.++. .. ......| .++..++++. ++.+|+++|++++. .++++
T Consensus 79 ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~---~~----~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~~~-~~~~~ 147 (376)
T 3f0h_A 79 SSTGSMEAVVMNCFTKKDKVLVIDGGSFGHR---FV----QLCEIHE--IPYVALKLEH-GKKLTKEKLYEYDN-QNFTG 147 (376)
T ss_dssp CHHHHHHHHHHHHCCTTCCEEEEESSHHHHH---HH----HHHHHTT--CCEEEEECCT-TCCCCHHHHHTTTT-SCCCE
T ss_pred ChhHHHHHHHHhccCCCCeEEEEeCChhhHH---HH----HHHHHcC--CceEEEeCCC-CCCCCHHHHHHhhc-cCceE
Confidence 7799999999999999999998875432221 00 0112223 3445555553 57899999998765 46888
Q ss_pred EEEeC--CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 305 LICGG--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 305 Viv~~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
|++.. +.+|..+|+++|.++|+++|+++++|++|+.|... ..++ .+|++++|+||+|.||.| |+++.+++
T Consensus 148 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~ 222 (376)
T 3f0h_A 148 LLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADP-----FNMNECGADVMITGSQKVLACPPGISVIVLAPR 222 (376)
T ss_dssp EEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSC-----CCHHHHTCSEEEEETTTTTCCCSSCEEEEECHH
T ss_pred EEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcc-----ccccccCccEEEecCcccccCCCceEEEEECHH
Confidence 87763 44688999999999999999999999999887542 1222 279999999999987777 77776654
No 30
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.78 E-value=1.8e-17 Score=161.91 Aligned_cols=221 Identities=16% Similarity=0.067 Sum_probs=150.9
Q ss_pred hHHHHHHHHHHHhh---hcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC
Q 015647 137 PEIFDIMEKEKQRQ---FKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD 213 (403)
Q Consensus 137 ~ei~~li~~e~~rq---~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~ 213 (403)
.++.+.+.+-.... .....+-.....++|.|.+++...+...+ +++. ......++++.+++++++++|++
T Consensus 13 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~~-----~~~~~~~~~~~l~~~la~~~~~~ 85 (397)
T 3f9t_A 13 KEILEELKKYRSLDLKYEDGNIFGSMCSNVLPITRKIVDIFLETNL--GDPG-----LFKGTKLLEEKAVALLGSLLNNK 85 (397)
T ss_dssp HHHHHHHHHHHTTSCCGGGTCBCSCSCCCCCTHHHHHHHHHTTCCT--TSGG-----GBHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHhhccCCCCCCCCeEEEecCCCcHHHHHHHHHHHhhcC--CCcc-----cChhHHHHHHHHHHHHHHHhCCC
Confidence 45555555432211 11233444456678999999987765433 2222 11234556666788999999998
Q ss_pred CCCCcceEEeCChHHHHHHHHhhhccC-------------CCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015647 214 SDNWGVNVQPYSCTSANFAVYTGLLLP-------------GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 214 ~~~~~v~V~~~SGT~An~aal~all~p-------------GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
++ -.+++++||+|+.+++.+++.+ ||+|++....|.+.. ..+...| .+++.++
T Consensus 86 ~~---~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~v~ 151 (397)
T 3f9t_A 86 DA---YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFE---------KGREMMD--LEYIYAP 151 (397)
T ss_dssp TC---EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHH---------HHHHHHT--CEEEEEC
T ss_pred CC---CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHH---------HHHHHcC--ceeEEEe
Confidence 74 1355668999999999998766 999999988765532 1233344 4566666
Q ss_pred cCCCCCCCCHHHHHHHhccCCCcEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccc-------cCC
Q 015647 281 VNPQTGYIDYEKLEEKAMDYRPKILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL-------ASP 351 (403)
Q Consensus 281 vd~~~g~ID~d~Le~~i~~~~pklViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~-------~~p 351 (403)
+++ ++.+|+++|++++++.++++|++... .+|...|+++|.++|+++|++|++|++|+.+.++.... ..+
T Consensus 152 ~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~ 230 (397)
T 3f9t_A 152 IKE-DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYK 230 (397)
T ss_dssp BCT-TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCC
T ss_pred eCC-CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccccccccccccc
Confidence 764 57899999999998646777766533 35778999999999999999999999998765532110 012
Q ss_pred CC---cccEEEEcCcCCCcCC-ceEEEEEeCC
Q 015647 352 FD---YCDIVTSTTHKSLRGP-RGGIIFFRRG 379 (403)
Q Consensus 352 ~~---~aDivt~StHKtL~GP-~GG~I~~~~~ 379 (403)
++ .+|++++|+||++.+| +.|+++++++
T Consensus 231 ~~~~~~~~~~~~s~~K~~~~~~~~g~~~~~~~ 262 (397)
T 3f9t_A 231 FDFSLGVDSITIDPHKMGHCPIPSGGILFKDI 262 (397)
T ss_dssp CSGGGTCSEEECCTTTTTCCCSSCEEEEESSG
T ss_pred ccccccCCeEEEccccccCCCCCceEEEEeCH
Confidence 22 4899999999998666 4477777664
No 31
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.78 E-value=1.6e-18 Score=171.72 Aligned_cols=194 Identities=13% Similarity=0.115 Sum_probs=140.7
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
+.|-.+...+++++++++...+...+ |....+...+ .++.+++++|.+. .++++|||+|+.++
T Consensus 25 ~~l~~~~p~~~~~~~~a~~~~~~~~~--------~~~~~~~~~~----l~~~la~~~~~~~-----~i~~~~gt~al~~~ 87 (391)
T 3dr4_A 25 PRISVAAPRLDGNERDYVLECMDTTW--------ISSVGRFIVE----FEKAFADYCGVKH-----AIACNNGTTALHLA 87 (391)
T ss_dssp ---CCCCCCCCSSHHHHHHHHHHHTC--------CSSCSHHHHH----HHHHHHHHHTCSE-----EEEESSHHHHHHHH
T ss_pred ceeccCCCCCCHHHHHHHHHHHHcCC--------ccCCChHHHH----HHHHHHHHhCCCc-----EEEeCCHHHHHHHH
Confidence 44555666778899999887775432 1111233333 4567999999874 47788999999999
Q ss_pred Hhhh-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC
Q 015647 234 YTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY 312 (403)
Q Consensus 234 l~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~ 312 (403)
+.++ +++||+|++....|.+.. ..+...| .+++.++++++++.+|+++|++++++ ++++|++. +.+
T Consensus 88 l~~~~~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~-n~t 154 (391)
T 3dr4_A 88 LVAMGIGPGDEVIVPSLTYIASA---------NSVTYCG--ATPVLVDNDPRTFNLDAAKLEALITP-RTKAIMPV-HLY 154 (391)
T ss_dssp HHHHTCCTTCEEEEESSSCTHHH---------HHHHHTT--CEEEEECBCTTTCSBCGGGSGGGCCT-TEEEECCB-CGG
T ss_pred HHHcCCCCcCEEEECCCchHHHH---------HHHHHCC--CEEEEEecCccccCcCHHHHHHhcCC-CceEEEEE-CCC
Confidence 9999 999999999998875542 1223333 46677777766788999999998864 57777653 356
Q ss_pred CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEc--CcCCCcCCceEEEEEeCC
Q 015647 313 PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTST--THKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 313 g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~S--tHKtL~GP~GG~I~~~~~ 379 (403)
|...|+++|.++|+++|++|++|++|+.|....+.....+ .|++++| .||+|.|+.||++++++.
T Consensus 155 G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~--~di~~~S~s~~K~l~~g~gg~~~~~~~ 221 (391)
T 3dr4_A 155 GQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSL--GDCATFSFFGNAIITTGEGGMITTNDD 221 (391)
T ss_dssp GCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS--SSEEEEECBTTSSSCCBSCEEEEESCH
T ss_pred CChhhHHHHHHHHHHcCCEEEEECcccccceECCeeeccc--CCEEEEECCCCCcCCcCCeEEEEECCH
Confidence 7889999999999999999999999999876544322222 3555555 779998888899988764
No 32
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.78 E-value=2.6e-18 Score=169.20 Aligned_cols=193 Identities=17% Similarity=0.118 Sum_probs=138.7
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhh
Q 015647 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTG 236 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~a 236 (403)
.++...+++.|++++...+.+. + +......++ .+++++++++|++++ ..+++++||+|+.+++.+
T Consensus 14 ~~~~~~~~~~v~~a~~~~~~~~--------~---~~~~~~~~~-~l~~~la~~~g~~~~---~v~~t~g~t~a~~~~~~~ 78 (392)
T 2z9v_A 14 TAGPVNAYPEVLRGLGRTVLYD--------Y---DPAFQLLYE-KVVDKAQKAMRLSNK---PVILHGEPVLGLEAAAAS 78 (392)
T ss_dssp SSSCCCCCHHHHHHTTSCCCCT--------T---SHHHHHHHH-HHHHHHHHHTTCSSC---CEEESSCTHHHHHHHHHH
T ss_pred cCCCcCCCHHHHHHHhcccccc--------c---cHHHHHHHH-HHHHHHHHHhCCCCC---EEEEeCCchHHHHHHHHH
Confidence 4567778999999987544321 1 122222333 467889999999753 234446789999999999
Q ss_pred hccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc-CCCcEEEEeCCC--CC
Q 015647 237 LLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD-YRPKILICGGSS--YP 313 (403)
Q Consensus 237 ll~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~-~~pklViv~~s~--~g 313 (403)
++++||+|++....|.+.. + .......| ++++.+++++ ++.+|+++|++++++ .++++|++...+ +|
T Consensus 79 ~~~~gd~Vl~~~~~~~~~~---~----~~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG 148 (392)
T 2z9v_A 79 LISPDDVVLNLASGVYGKG---F----GYWAKRYS--PHLLEIEVPY-NEAIDPQAVADMLKAHPEITVVSVCHHDTPSG 148 (392)
T ss_dssp HCCTTCCEEEEESSHHHHH---H----HHHHHHHC--SCEEEEECCT-TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGT
T ss_pred hcCCCCEEEEecCCcccHH---H----HHHHHHcC--CceEEeeCCC-CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCc
Confidence 9999999999887653321 0 01112233 3455666664 467999999999964 368888776543 47
Q ss_pred ccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 314 REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 314 ~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
...|+++|.++|+++|+++++|++|+.|..+.+ +. .+|++++|+||++.||.| |+++++++
T Consensus 149 ~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~ 212 (392)
T 2z9v_A 149 TINPIDAIGALVSAHGAYLIVDAVSSFGGMKTH-----PEDCKADIYVTGPNKCLGAPPGLTMMGVSER 212 (392)
T ss_dssp EECCHHHHHHHHHHTTCEEEEECTTTBTTBSCC-----GGGGTCSEEEECSSSTTCCCSCCEEEEECHH
T ss_pred eeccHHHHHHHHHHcCCeEEEEcccccCCcccc-----cccccceEEEecCcccccCCCceeEEEECHH
Confidence 789999999999999999999999998754321 22 379999999999998887 88888764
No 33
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.78 E-value=2.8e-19 Score=180.47 Aligned_cols=195 Identities=14% Similarity=0.047 Sum_probs=140.8
Q ss_pred eeccCccCcHHHHHHHHHHhhhcCCCCCCCCc---cccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-C-ChHHHH
Q 015647 156 LIASENFVCRAVMEALGSHLTNKYSEGYPGAR---YYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP-Y-SCTSAN 230 (403)
Q Consensus 156 LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr---~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~-~-SGT~An 230 (403)
..|+...++++|+++|..++.+.+ +++.+. ++.+.++.+.+|+ +|++++++||++.. -.|+| + +||+|+
T Consensus 17 n~at~~~~p~~Vl~a~~~~~~~~~--~n~~s~~~~~hr~~~~~~~~~~-ar~~la~ll~~~~~---~evif~t~~~T~a~ 90 (377)
T 3e77_A 17 NLYFQSMLPHSVLLEIQKELLDYK--GVGISVLEMSHRSSDFAKIINN-TENLVRELLAVPDN---YKVIFLQGGGCGQF 90 (377)
T ss_dssp CEECSCCCCHHHHHHHHHTSSSGG--GSSSCTTTCCTTSHHHHHHHHH-HHHHHHHHHTCCTT---EEEEEESSHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHHhcc--cCCccccccCCCCHHHHHHHHH-HHHHHHHHhCCCCC---CeEEEEcCchHHHH
Confidence 367788899999999999887655 444442 4556777777775 89999999999753 14555 4 689999
Q ss_pred HHHHhhhccC--CCeEEecCCCCCccccccccCCccchhhhcc-cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015647 231 FAVYTGLLLP--GDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS-IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 231 ~aal~all~p--GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g-~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
++++.+++++ ||+|++.... ++++.+ +..+. .++.+..+++++ ++.+++++++.++. .++++|.+
T Consensus 91 n~a~~~l~~~~~Gd~v~~~~~g---~~~~~~-------~~~a~~~G~~~~~~~~~~-~~~~~~~~~~~~i~-~~t~lV~~ 158 (377)
T 3e77_A 91 SAVPLNLIGLKAGRCADYVVTG---AWSAKA-------AEEAKKFGTINIVHPKLG-SYTKIPDPSTWNLN-PDASYVYY 158 (377)
T ss_dssp HHHHHHHGGGSTTCEEEECCCS---HHHHHH-------HHHHTTTSEEEECSCCCS-SSCSCCCGGGCCCC-TTCSCEEE
T ss_pred HHHHHhccCCCCCCeEEEEECC---HHHHHH-------HHHHHHhCCceEEeccCC-CcCCCCChHHhccC-CCccEEEE
Confidence 9999999865 9999887654 333321 22222 234555556653 45577777765554 36788766
Q ss_pred eCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 308 GGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 308 ~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
... ++|.++|+ ||+++|+++++|++|++|.++. +++..|++++|+||++ ||+| |+++.+++
T Consensus 159 ~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~i-----d~~~~~~~~~s~~K~~-gp~G~g~l~~~~~ 222 (377)
T 3e77_A 159 CANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPV-----DVSKFGVIFAGAQKNV-GSAGVTVVIVRDD 222 (377)
T ss_dssp ESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCC-----CGGGCSEEEEEGGGTT-SCTTCEEEEEETT
T ss_pred eCccCchheEchh-----hhccCCCEEEEEcccccCCCCC-----chhhcCEEEEeccccc-CCCccEEEEEcHH
Confidence 543 46889998 5788999999999999998643 2334578999999998 8999 88888775
No 34
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.78 E-value=3.7e-19 Score=178.44 Aligned_cols=196 Identities=13% Similarity=0.080 Sum_probs=136.7
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCc---cccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-C-Ch
Q 015647 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGAR---YYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP-Y-SC 226 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr---~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~-~-SG 226 (403)
+..+|.|+++.++++|+++|..++.+.+ +++.+. .+.+.++.+.+|+ +|++++++||++.. -.|+| + +|
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~--~~~~s~~~~~hr~~~~~~~~~~-~r~~la~ll~~~~~---~~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQ--GRGYSIMEISHRTKVFEEVHFG-AQEKAKKLYELNDD---YEVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGG--GSSSCGGGSCSSSHHHHHHHHH-HHHHHHHHHTCCTT---EEEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcc--cCCceeeccCCCCHHHHHHHHH-HHHHHHHHhCCCCC---ceEEEEcCcH
Confidence 5678999999999999999998887654 455543 3446677777775 89999999999642 14555 5 58
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCC-CCHHHHHHHhccCCCcEE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGY-IDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~-ID~d~Le~~i~~~~pklV 305 (403)
|+|+++++.+++ +||+++.... |+++|.++ ......| +++..+++++.+.. ++++. + +. .++++|
T Consensus 79 T~a~n~~~~~~~-~~~~~~~i~~---~~~~~~~~----~~a~~~G--~~v~~~~~~~~g~~~~~~~~-~--l~-~~t~lv 144 (361)
T 3m5u_A 79 SLQFAMIPMNLA-LNGVCEYANT---GVWTKKAI----KEAQILG--VNVKTVASSEESNFDHIPRV-E--FS-DNADYA 144 (361)
T ss_dssp HHHHHHHHHHHC-CSSCEEEEEC---SHHHHHHH----HHHHHTT--CCEEEEEECTTTTSCSCCCC-C--CC-TTSSEE
T ss_pred HHHHHHHHHhcC-CCCeEEEEeC---CHHHHHHH----HHHHHcC--CceEEEecccCcCCCcCChh-h--cC-CCCCEE
Confidence 999999999999 8997643332 23444321 1112223 45555666643222 56666 4 55 368888
Q ss_pred EEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 306 ICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 306 iv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+...+ +|.++|. |++ +|+++++|++|++|.++. +++.+|++++|+||++ ||+| |+++.+++
T Consensus 145 ~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~i-----d~~~~d~~~~s~~K~~-gp~G~g~l~~~~~ 209 (361)
T 3m5u_A 145 YICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKV-----DFSNIALFYGGVQKNA-GISGLSCIFIRKD 209 (361)
T ss_dssp EEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCC-----CCTTEEEEEEETTTTS-SCTTCEEEEEEHH
T ss_pred EEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCC-----CcccCCEEEEechhcc-CCCccEEEEEcHH
Confidence 775443 4776662 444 499999999999998653 3335899999999998 8999 88888764
No 35
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.78 E-value=4.8e-18 Score=167.18 Aligned_cols=199 Identities=18% Similarity=0.178 Sum_probs=141.3
Q ss_pred CccCcHHHHHHHHHHhhhcCCCCCCCCc-cccchHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCChHHHHHHHHhhh
Q 015647 160 ENFVCRAVMEALGSHLTNKYSEGYPGAR-YYTGNQYIDQIENLCFERALKAFDL-DSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 160 en~~~p~V~eA~~s~l~~~y~eG~pgsr-~~~G~~~~~~lE~~arerla~lfg~-~~~~~~v~V~~~SGT~An~aal~al 237 (403)
....++.|++++...+.+.+ +++++. +..+......++ .+++++++++|. +++ ..++.++||+|+.+++.++
T Consensus 32 ~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~l~~~la~~~~~~~~~---~v~~~~g~t~a~~~~~~~~ 105 (406)
T 1kmj_A 32 SAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKME-NVRKRASLFINARSAE---ELVFVRGTTEGINLVANSW 105 (406)
T ss_dssp CCCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHHHHHHHH-HHHHHHHHHTTCSCGG---GEEEESSHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHHHHHHHH-HHHHHHHHHcCCCCCC---eEEEeCChhHHHHHHHHHh
Confidence 44678999999998876543 344431 111222223333 468889999998 443 2344567889999999999
Q ss_pred ----ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC--C
Q 015647 238 ----LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS--S 311 (403)
Q Consensus 238 ----l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s--~ 311 (403)
+++||+|++....|.+.+. .+ ...+...| .+++.+++++ ++.+|+++|++++.+ ++++|++... .
T Consensus 106 ~~~~~~~gd~vl~~~~~~~~~~~-~~----~~~~~~~g--~~~~~~~~~~-~~~~d~~~l~~~l~~-~~~~v~~~~~~np 176 (406)
T 1kmj_A 106 GNSNVRAGDNIIISQMEHHANIV-PW----QMLCARVG--AELRVIPLNP-DGTLQLETLPTLFDE-KTRLLAITHVSNV 176 (406)
T ss_dssp HHHHCCTTCEEEEETTCCGGGTH-HH----HHHHHHHT--CEEEEECBCT-TSCBCGGGHHHHCCT-TEEEEEEESBCTT
T ss_pred hhhcCCCCCEEEEecccchHHHH-HH----HHHHHhCC--CEEEEEecCC-CCCcCHHHHHHHhcc-CCeEEEEeCCCcc
Confidence 8999999999988765531 10 01112233 4556666664 578999999999874 6788877653 3
Q ss_pred CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+|...|+++|.++|+++|+++++|++|+.|..+. .+. .+|++++|+||++ ||.| |+++++++
T Consensus 177 tG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~-----~~~~~~~d~~~~s~~K~~-g~~G~G~~~~~~~ 241 (406)
T 1kmj_A 177 LGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPV-----DVQALDCDFYVFSGHKLY-GPTGIGILYVKEA 241 (406)
T ss_dssp TCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC-----CHHHHTCSEEEEEGGGTT-SCTTCEEEEECHH
T ss_pred ccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCC-----cccccCCCEEEEEchhcc-CCCCcEEEEEeHH
Confidence 5788999999999999999999999999875421 121 3899999999987 7887 99988754
No 36
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.78 E-value=1.3e-18 Score=170.44 Aligned_cols=201 Identities=16% Similarity=0.100 Sum_probs=142.6
Q ss_pred hcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEE-eCChHHH
Q 015647 151 FKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQ-PYSCTSA 229 (403)
Q Consensus 151 ~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~-~~SGT~A 229 (403)
...+.+.+++..++++|++++...+... ++ ... ..+....+++++++++.+... .|+ ++||++|
T Consensus 22 ~~~~~~~p~p~~~~~~v~~a~~~~~~~~--------~~---~~~-~~~~~~l~~~la~~~~~~~~~---~v~~~~gg~~a 86 (393)
T 3kgw_A 22 PTRLLLGPGPSNLAPRVLAAGSLRMIGH--------MQ---KEM-LQIMEEIKQGIQYVFQTRNPL---TLVVSGSGHCA 86 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHTTCCCCCT--------TS---HHH-HHHHHHHHHHHHHHHTCCCSE---EEEESCCTTTH
T ss_pred ccceeccCCCCCCCHHHHHHhcccccCc--------cc---HHH-HHHHHHHHHHHHHHhCCCCCc---EEEEeCCcHHH
Confidence 3457789999999999999987532111 11 112 233334678899999987642 244 4679999
Q ss_pred HHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015647 230 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 230 n~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+.+++.+++++||+|++....+ +++.+. ..+...| .+++.+++++ ++.+|+++|++++++.++++|++..
T Consensus 87 l~~~~~~~~~~gd~vl~~~~~~---~~~~~~----~~~~~~g--~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~ 156 (393)
T 3kgw_A 87 METALFNLLEPGDSFLTGTNGI---WGMRAA----EIADRIG--ARVHQMIKKP-GEHYTLQEVEEGLAQHKPVLLFLVH 156 (393)
T ss_dssp HHHHHHHHCCTTCEEEEEESSH---HHHHHH----HHHHHTT--CEEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHhcCCCCCEEEEEeCCc---hhHHHH----HHHHHcC--CceEEEeCCC-CCCCCHHHHHHHHhhCCCcEEEEec
Confidence 9999999999999999986443 211100 1122333 4556666654 5689999999999865789887764
Q ss_pred C--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 310 S--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
. .+|...|+++|.++|+++|++|++|++|+.|....+.. -..+|++++++||+|.||.| |+++++++
T Consensus 157 ~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~---~~~~d~~~~s~sK~~~~~~g~g~~~~~~~ 226 (393)
T 3kgw_A 157 GESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMD---QQGIDIMYSSSQKVLNAPPGISLISFNDK 226 (393)
T ss_dssp EETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTT---TTTCCEEEEESSSTTCCCSSCEEEEECHH
T ss_pred cCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchh---hcCCCEEEecCcccccCCCceeEEEECHH
Confidence 4 35788899999999999999999999999775432110 01389999999999988876 88887654
No 37
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.77 E-value=1.4e-18 Score=171.13 Aligned_cols=190 Identities=14% Similarity=0.092 Sum_probs=140.4
Q ss_pred eeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh
Q 015647 156 LIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT 235 (403)
Q Consensus 156 LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~ 235 (403)
+-.+...+++++++++...+...+ |+ ..+...+ .++++++++|.+. .++++|||+|+.+++.
T Consensus 8 l~~~~~~~~~~~~~a~~~~~~~~~--------~~-~~~~~~~----l~~~la~~~~~~~-----~i~~~sgt~al~~~l~ 69 (373)
T 3frk_A 8 FKPMHDEIEYEIKFKFEEIYKRNW--------FI-LGDEDKK----FEQEFADYCNVNY-----CIGCGNGLDALHLILK 69 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC--------CS-SSHHHHH----HHHHHHHHHTSSE-----EEEESCHHHHHHHHHH
T ss_pred CCcccCCCCHHHHHHHHHHHHCCC--------cc-CCchHHH----HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHH
Confidence 333444567888998887765432 11 2233333 4557999999874 4778899999999999
Q ss_pred hh-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCc
Q 015647 236 GL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPR 314 (403)
Q Consensus 236 al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~ 314 (403)
++ +++||+|++....|.+.. ..+...| .+++.++++++++.+|+++|++++.+ ++++|++. +.+|.
T Consensus 70 ~l~~~~gd~Vi~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~-n~~G~ 136 (373)
T 3frk_A 70 GYDIGFGDEVIVPSNTFIATA---------LAVSYTG--AKPIFVEPDIRTYNIDPSLIESAITE-KTKAIIAV-HLYGQ 136 (373)
T ss_dssp HTTCCTTCEEEEETTSCTHHH---------HHHHHHS--CEEEEECEETTTTEECGGGTGGGCCT-TEEEEEEE-CCTTC
T ss_pred HcCCCCcCEEEECCCCcHHHH---------HHHHHcC--CEEEEEeccccccCcCHHHHHHhcCC-CCeEEEEE-CCCcC
Confidence 99 999999999998876543 1233334 45667777766788999999999875 67877754 35788
Q ss_pred cccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEc--CcCCCcC-CceEEEEEeCC
Q 015647 315 EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTST--THKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 315 ~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~S--tHKtL~G-P~GG~I~~~~~ 379 (403)
..|+++|.++|+++|++|++|++|+.|....+. ++. .+|++++| .||+|.+ +.||++++++.
T Consensus 137 ~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~ 202 (373)
T 3frk_A 137 PADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM---KVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDK 202 (373)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCCSSSCEEEEESCH
T ss_pred cccHHHHHHHHHHcCCEEEEECCcccCCEECCE---eccccccEEEEeCcCCCccCccceeEEEEeCCH
Confidence 899999999999999999999999998763221 121 37888888 5599977 56899988764
No 38
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.77 E-value=4.2e-18 Score=166.70 Aligned_cols=199 Identities=14% Similarity=0.090 Sum_probs=140.3
Q ss_pred hcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC----CCCCcceEEeCCh
Q 015647 151 FKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD----SDNWGVNVQPYSC 226 (403)
Q Consensus 151 ~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~----~~~~~v~V~~~SG 226 (403)
.+.+.+.+++..++++|++++...+... + .......++ ..+++++++++.. ++ ..++++||
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~~----------~-~~~~~~~~~-~~~~~l~~~~~~~~~~~~~---~v~~~~g~ 68 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLGH----------T-SPEFVSIFQ-RVLKNTRAVFKSAAASKSQ---PFVLAGSG 68 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCCT----------T-SHHHHHHHH-HHHHHHHHHTTCCGGGTCE---EEEEESCT
T ss_pred ccceeecCCCcCchHHHHHHHhcccccc----------C-CHHHHHHHH-HHHHHHHHHhCCCCCCCCc---eEEEcCch
Confidence 3457889999999999999987543211 0 111222232 3567788888864 22 23455678
Q ss_pred HHHHHHHHhhhc---cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec-CCCCCCCCHHHHHHHhccCCC
Q 015647 227 TSANFAVYTGLL---LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV-NPQTGYIDYEKLEEKAMDYRP 302 (403)
Q Consensus 227 T~An~aal~all---~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v-d~~~g~ID~d~Le~~i~~~~p 302 (403)
|+|+.+++.++. ++||+|++....+. |.++. ..+...| ++++.+++ + +++.+|+++|++++++.++
T Consensus 69 t~al~~~~~~~~~~~~~gd~vlv~~~~~~----~~~~~---~~~~~~g--~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~ 138 (385)
T 2bkw_A 69 TLGWDIFASNFILSKAPNKNVLVVSTGTF----SDRFA---DCLRSYG--AQVDVVRPLK-IGESVPLELITEKLSQNSY 138 (385)
T ss_dssp THHHHHHHHHHSCTTCSCCEEEEECSSHH----HHHHH---HHHHHTT--CEEEEECCSS-TTSCCCHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCcc----hHHHH---HHHHHcC--CceEEEecCC-CCCCCCHHHHHHHHhcCCC
Confidence 999999999987 89999987754321 11100 1122233 45666666 5 3678999999999976568
Q ss_pred cEEEEeCC--CCCccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEE
Q 015647 303 KILICGGS--SYPREWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIF 375 (403)
Q Consensus 303 klViv~~s--~~g~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~ 375 (403)
++|++... .+|.+.|+++|.++|+++ |+++++|++|+.|..+.+ +. .+|++++|+||+|+||.| |+++
T Consensus 139 ~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~~~d~~~~s~~K~~~~~~G~G~~~ 213 (385)
T 2bkw_A 139 GAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-----FDEWGVDFALTASQKAIGAPAGLSISL 213 (385)
T ss_dssp SEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-----TTTTTCSEEEEESSSTTCCCSCEEEEE
T ss_pred CEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-----ccccCceEEEecCccccccCCcceEEE
Confidence 88877643 357889999999999999 999999999998754321 22 379999999999998888 8888
Q ss_pred EeCC
Q 015647 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
++++
T Consensus 214 ~~~~ 217 (385)
T 2bkw_A 214 CSSR 217 (385)
T ss_dssp ECHH
T ss_pred EcHH
Confidence 8764
No 39
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.77 E-value=2.2e-18 Score=170.02 Aligned_cols=198 Identities=14% Similarity=0.052 Sum_probs=142.7
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHH
Q 015647 153 GIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFA 232 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~a 232 (403)
...+.+++..+++.|++++...+.+. | +.. ...+.+.+++++++++|++++. ..++++|||+|+.+
T Consensus 35 ~~l~~~~~~~~~~~v~~a~~~~~~~~---------~--~~~-~~~~~~~~~~~la~~~g~~~~~--~v~~t~g~t~al~~ 100 (393)
T 1vjo_A 35 RLLLGPGPSNAHPSVLQAMNVSPVGH---------L--DPA-FLALMDEIQSLLRYVWQTENPL--TIAVSGTGTAAMEA 100 (393)
T ss_dssp CEECSSSCCCCCHHHHHHHSSCCCCT---------T--SHH-HHHHHHHHHHHHHHHHTCCCSC--EEEESSCHHHHHHH
T ss_pred ceeccCCCCCCCHHHHHHHhcccccc---------c--CHH-HHHHHHHHHHHHHHHhCCCCCc--EEEEeCchHHHHHH
Confidence 45667788889999999987654321 1 122 2233344678899999997531 12445578999999
Q ss_pred HHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC--
Q 015647 233 VYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS-- 310 (403)
Q Consensus 233 al~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s-- 310 (403)
++.+++++||+|++....|.+.. +. ..+...| .+++.+++++ ++.+|+++|++++++.++++|++...
T Consensus 101 ~~~~~~~~gd~Vl~~~~~~~~~~---~~----~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~n 170 (393)
T 1vjo_A 101 TIANAVEPGDVVLIGVAGYFGNR---LV----DMAGRYG--ADVRTISKPW-GEVFSLEELRTALETHRPAILALVHAET 170 (393)
T ss_dssp HHHHHCCTTCEEEEEESSHHHHH---HH----HHHHHTT--CEEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHhccCCCCEEEEEcCChhHHH---HH----HHHHHcC--CceEEEecCC-CCCCCHHHHHHHHhhCCceEEEEeccCC
Confidence 99999999999999887654410 10 1123333 4566666664 57899999999997536888877643
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 311 SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|...|+++|.++|+++|+++++|++|+.|..+. .+. .+|++++|+||+|.+|.| |+++++++
T Consensus 171 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-----~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~ 237 (393)
T 1vjo_A 171 STGARQPLEGVGELCREFGTLLLVDTVTSLGGVPI-----FLDAWGVDLAYSCSQKGLGCSPGASPFTMSSR 237 (393)
T ss_dssp TTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCC-----CTTTTTCSEEECCSSSTTCSCSSCEEEEECHH
T ss_pred CcceeccHHHHHHHHHHcCCEEEEECCccccCcCC-----cccccCccEEEEcCcccccCCCceEEEEECHH
Confidence 35778899999999999999999999999775432 222 379999999999988876 88888764
No 40
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.77 E-value=3.2e-18 Score=171.19 Aligned_cols=187 Identities=13% Similarity=0.086 Sum_probs=133.8
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHH-HHHcC-CCCCCCcceEEeCChHHHHHHHHhhh-cc
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERA-LKAFD-LDSDNWGVNVQPYSCTSANFAVYTGL-LL 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerl-a~lfg-~~~~~~~v~V~~~SGT~An~aal~al-l~ 239 (403)
.++.+++++...+...+ +..-.+...++|+ ++ ++++| .++ .|+++|||+|+++++.++ ++
T Consensus 14 ~~~~i~~a~~~~~~~~~--------~~~~~~~~~~l~~----~~~a~~~g~~~~-----~v~~~sgt~al~~al~~l~~~ 76 (377)
T 3ju7_A 14 PVIEYLDELKEIDASHI--------YTNYGPINQRFEQ----TIMSGFFQNRGA-----VTTVANATLGLMAAIQLKKRK 76 (377)
T ss_dssp CGGGGHHHHHHHHHHTC--------CSSSCHHHHHHHH----HHHHHTSTTCSE-----EEEESCHHHHHHHHHHHHSCT
T ss_pred CcHHHHHHHHHHHHcCC--------cccCCHHHHHHHH----HHHHHHhCCCCe-----EEEeCCHHHHHHHHHHHcCCC
Confidence 36677888877775532 1111234555554 58 99999 444 477889999999999998 89
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCC--CcEEEEeCCCCCcccc
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR--PKILICGGSSYPREWD 317 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~--pklViv~~s~~g~~~D 317 (403)
|||+|+++...|.+.. ..+...| .+++.++++++++.+|+++|++++...+ +|+|+.. +.+|...|
T Consensus 77 ~Gd~Vi~~~~~~~~~~---------~~~~~~G--~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~-~~~G~~~~ 144 (377)
T 3ju7_A 77 KGKYALMPSFTFPATP---------LAAIWCG--LEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY-ATFGSWMN 144 (377)
T ss_dssp TCCEEEEESSSCTHHH---------HHHHHTT--CEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB-CGGGBCCC
T ss_pred CcCEEEECCCCcHHHH---------HHHHHcC--CEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE-CCCCCccC
Confidence 9999999998875532 1233344 4667777876678999999999884334 7877643 34688899
Q ss_pred HHHHHHHHHHcCCEEEEecccccccccccccc-CCCCcccEEEEcCcCCCcCCceEEEEEeCC
Q 015647 318 YGRFRQIADKCGAVLMCDMAHISGLIAAKELA-SPFDYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 318 i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~-~p~~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
+++|.++|+ +|++|++|++|+.|....+... ..+..+++++++.||+|.++.||+++++++
T Consensus 145 ~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~ 206 (377)
T 3ju7_A 145 LEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNE 206 (377)
T ss_dssp CHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCH
T ss_pred HHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCH
Confidence 999999999 9999999999999875432211 111123444455689998878899998765
No 41
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.77 E-value=5.5e-18 Score=172.36 Aligned_cols=196 Identities=12% Similarity=0.033 Sum_probs=137.1
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHH
Q 015647 153 GIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFA 232 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~a 232 (403)
...+..+.+|..+..-+ +...+......++.+.|+ +++..+++|+ ++++++|++. .++++|||+||++
T Consensus 45 ~~pi~~s~t~~~~~~~~-~~~~~~~~~~~~~~y~r~--~~p~~~~le~----~lA~l~g~~~-----~i~~ssGt~Ai~~ 112 (415)
T 2fq6_A 45 NSVIQRASSLVFDSVEA-KKHATRNRANGELFYGRR--GTLTHFSLQQ----AMCELEGGAG-----CVLFPCGAAAVAN 112 (415)
T ss_dssp SCCBCCCSCBCCSSHHH-HHHHHHTTTTTSCCCTTT--CCHHHHHHHH----HHHHHHTCSE-----EEEESSHHHHHHH
T ss_pred eCCeecccceeeCCHHH-HHHhhccccCCCccccCC--CCchHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHH
Confidence 45667777887443322 111222221123444454 5666666654 6899999875 4778899999999
Q ss_pred HHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC-
Q 015647 233 VYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS- 311 (403)
Q Consensus 233 al~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~- 311 (403)
++.+++++||+|++...+|++.+.... +.+... ++++.++++ .|+++|++++++ ++|+|++...+
T Consensus 113 al~~l~~~Gd~Vi~~~~~y~~~~~~~~-----~~l~~~--G~~v~~v~~------~d~~~le~ai~~-~tklV~~e~~~N 178 (415)
T 2fq6_A 113 SILAFIEQGDHVLMTNTAYEPSQDFCS-----KILSKL--GVTTSWFDP------LIGADIVKHLQP-NTKIVFLESPGS 178 (415)
T ss_dssp HHHTTCCTTCEEEEETTSCHHHHHHHH-----HTGGGG--TCEEEEECT------TCGGGGGGGCCT-TEEEEEEESSCT
T ss_pred HHHHHhCCCCEEEEeCCCchHHHHHHH-----HHHHHc--CcEEEEECC------CCHHHHHHhhcc-CCcEEEEECCCC
Confidence 999999999999999988876542100 001112 345555543 288999998874 58998887544
Q ss_pred -CCccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015647 312 -YPREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 312 -~g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
+|.++|+++|+++|++ +|++|++|++|+.|.. ..|++ .+|++++|+||+++|+. ||+++.+++
T Consensus 179 ptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~-----~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~ 248 (415)
T 2fq6_A 179 ITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVL-----FKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNAR 248 (415)
T ss_dssp TTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTS-----SCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTT
T ss_pred CCCEeecHHHHHHHHHhhcCCCEEEEECCCccccc-----CCccccCCeEEEEeCccccCCCCCceEEEEEeCHH
Confidence 4678999999999999 9999999999987642 13444 48999999999997765 688888764
No 42
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.77 E-value=2.9e-18 Score=169.00 Aligned_cols=197 Identities=15% Similarity=0.088 Sum_probs=141.2
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEE-eCChHHHH
Q 015647 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQ-PYSCTSAN 230 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~-~~SGT~An 230 (403)
+.+.+.+++..+++.|++++...+... | ....+.....+++++++++|.+++. +|+ +.|||+|+
T Consensus 18 ~~~~~~~~p~~~~~~v~~a~~~~~~~~---------~---~~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~al 82 (396)
T 2ch1_A 18 EKIMMGPGPSNCSKRVLTAMTNTVLSN---------F---HAELFRTMDEVKDGLRYIFQTENRA---TMCVSGSAHAGM 82 (396)
T ss_dssp CCBCCSSSSCCCCHHHHHHTTSCCCCT---------T---CHHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHH
T ss_pred cceeecCCCCCCCHHHHHHhccccccC---------C---ChhHHHHHHHHHHHHHHHhCCCCCc---EEEECCcHHHHH
Confidence 346677777788999999987543211 1 1222232334688899999998631 354 45689999
Q ss_pred HHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015647 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 231 ~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
.+++.+++++||+|++....|.++.. ...+...| .+++.+++++ ++.+|+++|++++++.++++|++...
T Consensus 83 ~~~~~~~~~~gd~vl~~~~~~~~~~~-------~~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~ 152 (396)
T 2ch1_A 83 EAMLSNLLEEGDRVLIAVNGIWAERA-------VEMSERYG--ADVRTIEGPP-DRPFSLETLARAIELHQPKCLFLTHG 152 (396)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHHH-------HHHHHHTT--CEEEEEECCT-TSCCCHHHHHHHHHHHCCSEEEEESE
T ss_pred HHHHHHhcCCCCeEEEEcCCcccHHH-------HHHHHHcC--CceEEecCCC-CCCCCHHHHHHHHHhCCCCEEEEECC
Confidence 99999999999999999877544310 01123334 4556666664 57899999999997546888877643
Q ss_pred --CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeC
Q 015647 311 --SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRR 378 (403)
Q Consensus 311 --~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~ 378 (403)
.+|...|+++|.++|+++|+++++|++|+.|..+. ++. .+|++++|+||++.||.| |+++.++
T Consensus 153 ~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~-----~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~ 220 (396)
T 2ch1_A 153 DSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPF-----YMDKWEIDAVYTGAQKVLGAPPGITPISISP 220 (396)
T ss_dssp ETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCC-----CTTTTTCCEEECCCC-CCCCCSSCEEEEECH
T ss_pred CCCCceecCHHHHHHHHHHcCCEEEEEccccccCCcc-----chhhcCcCEEEEcCCccccCCCCeEEEEECH
Confidence 35788899999999999999999999999875431 222 379999999999988877 8888765
No 43
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.77 E-value=1e-17 Score=174.37 Aligned_cols=178 Identities=15% Similarity=0.094 Sum_probs=133.0
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCC-CCcceEEeCChHHHHHHHHhhhcc--------------CCCeEEecCCCCCccc
Q 015647 191 GNQYIDQIENLCFERALKAFDLDSD-NWGVNVQPYSCTSANFAVYTGLLL--------------PGDRIMGLDSPSGGHL 255 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~-~~~v~V~~~SGT~An~aal~all~--------------pGD~VL~~~~ehgghl 255 (403)
..+...++|+.+++++++++|.+.. . ..+++++||+||..++.++.. +++.|+++...|.+..
T Consensus 129 ~~p~~~~le~~~~~~l~~~~g~~~~~~--~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~ 206 (511)
T 3vp6_A 129 IAPVFVLMEQITLKKMREIVGWSSKDG--DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK 206 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSSSC--EEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHH
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCCC--ceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHH
Confidence 4566788999999999999999842 2 246667899999998887754 5778998887653321
Q ss_pred cccccCCccchhhhcccce-EEeeeecCCCCCCCCHHHHHHHhccCC-----CcEEEEeC--CCCCccccHHHHHHHHHH
Q 015647 256 SHGYHTPGGKKVSAASIFF-ESFPYKVNPQTGYIDYEKLEEKAMDYR-----PKILICGG--SSYPREWDYGRFRQIADK 327 (403)
Q Consensus 256 sh~~~~~~~~~v~~~g~~~-~vv~~~vd~~~g~ID~d~Le~~i~~~~-----pklViv~~--s~~g~~~Di~~I~~Iake 327 (403)
+.+...|.+. +++.+++++ ++.+|+++|++++++.+ |++|++.. +.+|.+.|+++|++||++
T Consensus 207 ---------~~~~~~g~g~~~~~~v~~d~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~ 276 (511)
T 3vp6_A 207 ---------KAGAALGFGTDNVILIKCNE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEK 276 (511)
T ss_dssp ---------HHHHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHH
T ss_pred ---------HHHHHcCCCCCcEEEeecCC-CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHH
Confidence 3344555422 455666764 68999999999997532 67776643 346888999999999999
Q ss_pred cCCEEEEeccccccccccccccCCC---CcccEEEEcCcCCCcCCce-EEEEEeCCC
Q 015647 328 CGAVLMCDMAHISGLIAAKELASPF---DYCDIVTSTTHKSLRGPRG-GIIFFRRGK 380 (403)
Q Consensus 328 ~Ga~LivDaAh~~Glia~g~~~~p~---~~aDivt~StHKtL~GP~G-G~I~~~~~~ 380 (403)
+|+++|+|+||+.|.+....+...+ ..+|++++++||||++|.| |++++++..
T Consensus 277 ~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~ 333 (511)
T 3vp6_A 277 YNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKG 333 (511)
T ss_dssp HTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTT
T ss_pred cCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHH
Confidence 9999999999999987543322222 3589999999999999977 888887754
No 44
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.77 E-value=2e-18 Score=166.41 Aligned_cols=193 Identities=14% Similarity=0.064 Sum_probs=139.4
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC--CCCCcceEEe-CChHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD--SDNWGVNVQP-YSCTSAN 230 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~--~~~~~v~V~~-~SGT~An 230 (403)
+.+.|++..+++.|++++...+.+. + +... ......+++++++++|.+ .. .+++ ++||+|+
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~~--------~---~~~~-~~~~~~l~~~la~~~g~~~~~~----~v~~t~g~t~a~ 65 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRGH--------L---DPEV-LRVNRAIQERLAALFDPGEGAL----VAALAGSGSLGM 65 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCCT--------T---CHHH-HHHHHHHHHHHHHHHCCCTTCE----EEEESSCHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhcccccc--------c---CHHH-HHHHHHHHHHHHHHhCCCCCCc----eEEEcCCcHHHH
Confidence 5678999999999999987654321 1 2222 233445788899999986 32 3444 5689999
Q ss_pred HHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015647 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 231 ~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
.+++.++++ |+|++...+|.++ .+ ...+...| ++++.+++++ ++.+|+++|++++++.++++|++...
T Consensus 66 ~~~~~~~~~--d~vl~~~~~~~~~---~~----~~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~ 133 (353)
T 2yrr_A 66 EAGLANLDR--GPVLVLVNGAFSQ---RV----AEMAALHG--LDPEVLDFPP-GEPVDPEAVARALKRRRYRMVALVHG 133 (353)
T ss_dssp HHHHHTCSC--CCEEEEECSHHHH---HH----HHHHHHTT--CCEEEEECCT-TSCCCHHHHHHHHHHSCCSEEEEESE
T ss_pred HHHHHHhcC--CcEEEEcCCCchH---HH----HHHHHHcC--CceEEEeCCC-CCCCCHHHHHHHHHhCCCCEEEEEcc
Confidence 999999877 8999887665432 00 01122234 3456666664 57899999999997646888877654
Q ss_pred C--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 311 S--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 ~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+ +|...|+++|.++|+++|+++++|++|+.|..+ .++. .+|++++|+||++.||.| |+++++++
T Consensus 134 ~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~-----~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~ 202 (353)
T 2yrr_A 134 ETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLP-----FSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLE 202 (353)
T ss_dssp ETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSC-----CCHHHHTCSEEECCTTSTTCCCSSCEEEEECHH
T ss_pred CCCcceecCHHHHHHHHHHcCCeEEEEcCccccccc-----ccccccCceEEEecCcccccCCCceEEEEECHH
Confidence 3 578899999999999999999999999876432 1222 379999999999988877 88888764
No 45
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.77 E-value=2.2e-18 Score=169.78 Aligned_cols=193 Identities=19% Similarity=0.180 Sum_probs=141.5
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
+.+-++...+++++++++...+...+ |+ ..+...++ ++++++++|.+. .++++|||+|+.++
T Consensus 5 ~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~-~~~~~~~l----~~~la~~~~~~~-----~~~~~sGt~al~~a 66 (367)
T 3nyt_A 5 IDLKNQQARIKDKIDAGIQRVLRHGQ--------YI-LGPEVTEL----EDRLADFVGAKY-----CISCANGTDALQIV 66 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHCC--------CS-SCHHHHHH----HHHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred ccccccccccCHHHHHHHHHHHhcCC--------cc-CChHHHHH----HHHHHHHhCCCc-----EEEeCCHHHHHHHH
Confidence 33444455678889999887775432 21 22333444 556999999874 47788999999999
Q ss_pred Hhhh-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC
Q 015647 234 YTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY 312 (403)
Q Consensus 234 l~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~ 312 (403)
+.++ +++||+|++....|.+.. ..+...| ++++.++++++++.+|+++|++++.+ ++++|+.. +.+
T Consensus 67 l~~~~~~~gd~Vi~~~~~~~~~~---------~~~~~~G--~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~-~~~ 133 (367)
T 3nyt_A 67 QMALGVGPGDEVITPGFTYVATA---------ETVALLG--AKPVYVDIDPRTYNLDPQLLEAAITP-RTKAIIPV-SLY 133 (367)
T ss_dssp HHHTTCCTTCEEEEESSSCTHHH---------HHHHHTT--CEEEEECBCTTTCSBCGGGTGGGCCT-TEEEECCB-CGG
T ss_pred HHHhCCCCcCEEEECCCccHHHH---------HHHHHcC--CEEEEEecCCccCCcCHHHHHHhcCc-CCcEEEee-CCc
Confidence 9999 899999999998765542 1233333 56777788876789999999999864 67777743 356
Q ss_pred CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcC--cCCCcC-CceEEEEEeCC
Q 015647 313 PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTT--HKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 313 g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~St--HKtL~G-P~GG~I~~~~~ 379 (403)
|...|+++|.++|+++|++|++|++|+.|....+..... ..|++++|+ ||+|++ +.||+++++++
T Consensus 134 G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~Sf~~~K~l~~~g~gg~~~~~~~ 201 (367)
T 3nyt_A 134 GQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCN--LSTVACTSFFPSAPLGCYGDGGAIFTNDD 201 (367)
T ss_dssp GCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTS--SSSEEEEECCTTSSSCCSSCCEEEEESCH
T ss_pred cChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccC--CCCEEEEECCCCCcCCCcCceeEEEeCCH
Confidence 788999999999999999999999999987643321112 238999995 899976 45789988654
No 46
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.76 E-value=2e-18 Score=167.17 Aligned_cols=197 Identities=15% Similarity=0.108 Sum_probs=137.8
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHH-HHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015647 153 GIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI-DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~-~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
.+.+.+++..+++.|++++...+ ++ ++ .... ..++ .+++++++++|.+ ..+...++++|||+|+.
T Consensus 5 ~~~~~~gp~~~~~~v~~a~~~~~------~~---~~---~~~~~~~~~-~l~~~la~~~g~~-~~~~~v~~~~g~t~a~~ 70 (366)
T 1m32_A 5 YLLLTPGPLTTSRTVKEAMLFDS------CT---WD---DDYNIGVVE-QIRQQLTALATAS-EGYTSVLLQGSGSYAVE 70 (366)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCC------CT---TS---HHHHTTTHH-HHHHHHHHHHCSS-SSEEEEEEESCHHHHHH
T ss_pred cccccCCCcCCCHHHHHHHhhhh------cC---CC---HHHHHHHHH-HHHHHHHHHhCCC-CcCcEEEEecChHHHHH
Confidence 47788888888999999987532 11 11 1112 2233 3577899999942 11111355668999999
Q ss_pred HHHhhhccCCCeEEecC-CCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-CCcEEEEeC
Q 015647 232 AVYTGLLLPGDRIMGLD-SPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-RPKILICGG 309 (403)
Q Consensus 232 aal~all~pGD~VL~~~-~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-~pklViv~~ 309 (403)
+++.+++++||+|++.. ..|++.+. ..+...| ++++.+++++ .+.+|+++|++++++. ++++|++..
T Consensus 71 ~~~~~~~~~gd~vi~~~~~~~~~~~~--------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~ 139 (366)
T 1m32_A 71 AVLGSALGPQDKVLIVSNGAYGARMV--------EMAGLMG--IAHHAYDCGE-VARPDVQAIDAILNADPTISHIAMVH 139 (366)
T ss_dssp HHHHHSCCTTCCEEEEESSHHHHHHH--------HHHHHHT--CCEEEEECCT-TSCCCHHHHHHHHHHCTTCCEEEEES
T ss_pred HHHHHhcCCCCeEEEEeCCCccHHHH--------HHHHHhC--CceEEEeCCC-CCCCCHHHHHHHHhcCCCeEEEEEec
Confidence 99999999999987764 33322110 1122234 3455556653 5789999999999864 578876654
Q ss_pred CC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 310 SS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+ +|...|+++|.++|+++|+++++|++|+.|..+.+ +. .+|++++|+||+|+||.| |+++++++
T Consensus 140 ~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~-----~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~ 209 (366)
T 1m32_A 140 SETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMD-----IAALHIDYLISSANKCIQGVPGFAFVIAREQ 209 (366)
T ss_dssp EETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-----TTTTTCSEEEEESSSTTCCCSSEEEEEEEHH
T ss_pred ccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCcc-----ccccCccEEEecCcccccCCCceEEEEECHH
Confidence 33 47889999999999999999999999998765322 22 389999999999988887 99998874
No 47
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.76 E-value=2.7e-17 Score=170.68 Aligned_cols=176 Identities=11% Similarity=-0.002 Sum_probs=130.3
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-------c-CCC------eEEecCCCCCcccc
Q 015647 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL-------L-PGD------RIMGLDSPSGGHLS 256 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all-------~-pGD------~VL~~~~ehgghls 256 (403)
..+...++|..+++++++++|++.. ..++.++||+||..++.++. + +|| +|+++...|.+..
T Consensus 142 ~s~~~~~le~~~~~~la~l~g~~~~---~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~- 217 (515)
T 2jis_A 142 IAPVFVLMEEEVLRKLRALVGWSSG---DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQ- 217 (515)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCSSC---EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH-
T ss_pred hchHHHHHHHHHHHHHHHHhCCCCC---CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHH-
Confidence 3456678888899999999999853 23455678999999888763 2 576 7888876654332
Q ss_pred ccccCCccchhhhcccce-EEeeeecCCCCCCCCHHHHHHHhccC-----CCcEEEEeC--CCCCccccHHHHHHHHHHc
Q 015647 257 HGYHTPGGKKVSAASIFF-ESFPYKVNPQTGYIDYEKLEEKAMDY-----RPKILICGG--SSYPREWDYGRFRQIADKC 328 (403)
Q Consensus 257 h~~~~~~~~~v~~~g~~~-~vv~~~vd~~~g~ID~d~Le~~i~~~-----~pklViv~~--s~~g~~~Di~~I~~Iake~ 328 (403)
+.+...|.+. +++.+++++ ++.+|+++|++++.+. +|++|++.. +.+|.+.|+++|+++|+++
T Consensus 218 --------~~~~~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~ 288 (515)
T 2jis_A 218 --------KGAAFLGLGTDSVRVVKADE-RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRH 288 (515)
T ss_dssp --------HHHHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH
T ss_pred --------HHHHHcCCCCCcEEEEecCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHc
Confidence 2334444422 455566664 6889999999999752 477777653 3467889999999999999
Q ss_pred CCEEEEeccccccccccccccCCC---CcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 329 GAVLMCDMAHISGLIAAKELASPF---DYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 329 Ga~LivDaAh~~Glia~g~~~~p~---~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
|++||+|++|+.|....+.+...+ ..+|++++++||+|++|.| |+++++++
T Consensus 289 g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~ 343 (515)
T 2jis_A 289 GLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDT 343 (515)
T ss_dssp TCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCC
T ss_pred CCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeCh
Confidence 999999999999887644222122 2589999999999998986 88888876
No 48
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.76 E-value=2e-17 Score=164.84 Aligned_cols=189 Identities=14% Similarity=0.159 Sum_probs=137.7
Q ss_pred CccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-c
Q 015647 160 ENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-L 238 (403)
Q Consensus 160 en~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l 238 (403)
...+++++++++...+...|.. + .| +...+ .++.+++++|.+. .++++|||+|+.+++.++ +
T Consensus 7 ~p~~~~~v~~a~~~~~~~~~~~--~-----~g-~~~~~----l~~~la~~~~~~~-----v~~~~ggt~al~~~~~~l~~ 69 (394)
T 1o69_A 7 PPHMGGNELKYIEEVFKSNYIA--P-----LG-EFVNR----FEQSVKDYSKSEN-----ALALNSATAALHLALRVAGV 69 (394)
T ss_dssp -----CCHHHHHHHHHHHTTTS--C-----TT-HHHHH----HHHHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHcCCcc--C-----CC-hHHHH----HHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCC
Confidence 3456788888888877654311 0 12 22333 4567999999854 466778999999999999 9
Q ss_pred cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC--CCcEEEEeCCCCCccc
Q 015647 239 LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY--RPKILICGGSSYPREW 316 (403)
Q Consensus 239 ~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~--~pklViv~~s~~g~~~ 316 (403)
++||+|++....|.+.. ..+...| .+++.++++ +++.+|+++|++++++. ++++|++.. .+|...
T Consensus 70 ~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~ 136 (394)
T 1o69_A 70 KQDDIVLASSFTFIASV---------APICYLK--AKPVFIDCD-ETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAA 136 (394)
T ss_dssp CTTCEEEEESSSCGGGT---------HHHHHTT--CEEEEECBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCC
T ss_pred CCCCEEEECCCccHHHH---------HHHHHcC--CEEEEEEeC-CCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChh
Confidence 99999999998875543 1233334 456666776 46789999999998754 588887765 577889
Q ss_pred cHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceEEEEEeC
Q 015647 317 DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 317 Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG~I~~~~ 378 (403)
|+++|.++|+++|++|++|++|+.|+...+.....+..+|++++|.||+|.|+++|++++++
T Consensus 137 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~ 198 (394)
T 1o69_A 137 KMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKN 198 (394)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESC
T ss_pred hHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECC
Confidence 99999999999999999999999887654432112234889999999999877789999864
No 49
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.75 E-value=4.3e-17 Score=165.74 Aligned_cols=221 Identities=12% Similarity=0.044 Sum_probs=150.3
Q ss_pred hHHHHHHHHHHHhhhc-cc---ceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC
Q 015647 137 PEIFDIMEKEKQRQFK-GI---ELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL 212 (403)
Q Consensus 137 ~ei~~li~~e~~rq~~-~l---~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~ 212 (403)
.+|++.+++....... .+ ..+ .++.++.|.+++...+.... ++ +...+...++|+.+++++++++|+
T Consensus 26 ~~v~~~~~~~~~~~~~~~~~~~~f~--~~~~~~~v~e~~~~a~~~~~--~~-----~~~~~~~~~l~~~~~~~la~l~g~ 96 (452)
T 2dgk_A 26 DVAFQIINDELYLDGNARQNLATFC--QTWDDENVHKLMDLSINKNW--ID-----KEEYPQSAAIDLRCVNMVADLWHA 96 (452)
T ss_dssp HHHHHHHHHHGGGSCCCTTBCSCCS--CCCCCHHHHHHHHHTTTCBT--TC-----TTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCCCCccCCCCee--CCCchHHHHHHHHHHhccCC--CC-----hhhChhHHHHHHHHHHHHHHHhCC
Confidence 4778877776432221 11 222 25678899999886653221 11 112345667888899999999999
Q ss_pred CCCC--CcceEEeCChHHHHHHHHhhhcc--------CC-----CeEEecCCCCCccccccccCCccchhhhcccceEEe
Q 015647 213 DSDN--WGVNVQPYSCTSANFAVYTGLLL--------PG-----DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESF 277 (403)
Q Consensus 213 ~~~~--~~v~V~~~SGT~An~aal~all~--------pG-----D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv 277 (403)
+... +...+++++||+||+.++.++.. +| ++|+++. .|... . +.+...| ++++
T Consensus 97 ~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~------~---~~~~~~G--~~v~ 164 (452)
T 2dgk_A 97 PAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICW------H---KFARYWD--VELR 164 (452)
T ss_dssp CCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHH------H---HHHHHTT--CEEE
T ss_pred CcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHH------H---HHHHHcC--ceEE
Confidence 8642 11235667899999999888754 56 5888876 53211 1 2334444 4566
Q ss_pred eeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC--CCCccccHHHHHHHHHHc------CCEEEEeccccccccc--ccc
Q 015647 278 PYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS--SYPREWDYGRFRQIADKC------GAVLMCDMAHISGLIA--AKE 347 (403)
Q Consensus 278 ~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s--~~g~~~Di~~I~~Iake~------Ga~LivDaAh~~Glia--~g~ 347 (403)
.++++++++.+|+++|++++.+ +|++|++... .+|.+.|+++|.++|+++ |+++|+|+||+.+..+ .+.
T Consensus 165 ~v~~~~~~~~~d~~~l~~~i~~-~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 243 (452)
T 2dgk_A 165 EIPMRPGQLFMDPKRMIEACDE-NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPD 243 (452)
T ss_dssp ECCCBTTBCSCCHHHHHHHCCT-TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTT
T ss_pred EEecCCCCCeECHHHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCcc
Confidence 6677644688999999999975 5777766533 457889999999999995 9999999999887542 111
Q ss_pred ccCC--CCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 348 LASP--FDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 348 ~~~p--~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+.. +..+|++++++||++.+|.| |++++++.
T Consensus 244 ~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~ 278 (452)
T 2dgk_A 244 IVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDE 278 (452)
T ss_dssp CCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSG
T ss_pred chhhcCCCCCcEEEECcccccCCCCCeEEEEEcCH
Confidence 1112 23599999999999877665 99998765
No 50
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.75 E-value=1.2e-17 Score=167.24 Aligned_cols=206 Identities=16% Similarity=0.154 Sum_probs=134.2
Q ss_pred cCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc
Q 015647 159 SENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL 238 (403)
Q Consensus 159 Sen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all 238 (403)
+.+.+++.|++++...+...+ ++|...|..+....+.++ .+|+++++++|++++ ..++.++||+|+.+++.+++
T Consensus 26 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~~~ 99 (432)
T 3a9z_A 26 ATTPLEPEVIQAVTEAMKEAW--GNPSSSYVAGRKAKDIIN-TARASLAKMIGGKPQ---DIIFTSGGTESNNLVIHSTV 99 (432)
T ss_dssp TCCCCCHHHHHHHHHHHHHCC--SCTTCSSHHHHHHHHHHH-HHHHHHHHHHTCCGG---GEEEESCHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHhc--CCCccCcHHHHHHHHHHH-HHHHHHHHHcCCCcC---eEEEeCChHHHHHHHHHHHH
Confidence 445789999999998876533 567655544433333344 478899999999754 13444567999999998886
Q ss_pred --------cCCCeEEecCCCCCcc-------ccccccCCccchhhh-cc-cceEEeeeecCCCCCCCCHHHHHHHhccCC
Q 015647 239 --------LPGDRIMGLDSPSGGH-------LSHGYHTPGGKKVSA-AS-IFFESFPYKVNPQTGYIDYEKLEEKAMDYR 301 (403)
Q Consensus 239 --------~pGD~VL~~~~ehggh-------lsh~~~~~~~~~v~~-~g-~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~ 301 (403)
++||+|++....+.+. ..|.++. ..... .. .+.+++.++++++++.+|+++|++++.+ +
T Consensus 100 ~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~---~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~-~ 175 (432)
T 3a9z_A 100 RCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIR---LPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRP-T 175 (432)
T ss_dssp HHHHHHHHHC------------CCCEEEEETTCCHHHH---HHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCT-T
T ss_pred hhhhhccccCCccccccccccccCCeEEEecCcchhHH---HHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccC-C
Confidence 5898777666554321 0111100 00111 11 1245666666644678999999999874 6
Q ss_pred CcEEEEeCCC--CCccccHHHHHHHHHHcC----------CEEEEeccccccccccccccCCCC--cccEEEEcCcCCCc
Q 015647 302 PKILICGGSS--YPREWDYGRFRQIADKCG----------AVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLR 367 (403)
Q Consensus 302 pklViv~~s~--~g~~~Di~~I~~Iake~G----------a~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~ 367 (403)
+++|++...+ +|...|+++|.++|+++| +++++|++|+.|..+. .+. .+|++++|+||++
T Consensus 176 ~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~-----~~~~~~~d~~~~s~~K~~- 249 (432)
T 3a9z_A 176 TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRV-----DVEDLGVDFLTIVGHKFY- 249 (432)
T ss_dssp EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCC-----CHHHHCCSEEEEEGGGTT-
T ss_pred ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCccc-----ChhhcCCCEEEEehhHhc-
Confidence 7888776543 478999999999999999 9999999998875321 111 3899999999976
Q ss_pred CCceEEEEEeCCC
Q 015647 368 GPRGGIIFFRRGK 380 (403)
Q Consensus 368 GP~GG~I~~~~~~ 380 (403)
||+.|++++++..
T Consensus 250 g~~~G~~~~~~~~ 262 (432)
T 3a9z_A 250 GPRIGALYVRGVG 262 (432)
T ss_dssp CCSCEEEEETTBT
T ss_pred CCcceEEEEcccc
Confidence 7888999988653
No 51
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.75 E-value=3.1e-17 Score=162.56 Aligned_cols=188 Identities=18% Similarity=0.157 Sum_probs=137.8
Q ss_pred ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh
Q 015647 158 ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al 237 (403)
.+...++++|++++...+...+ |+. .+...+ +++.+++++|.+. .|+++|||+|+++++.++
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~--------~~~-~~~~~~----l~~~la~~~~~~~-----~i~~~sGt~a~~~al~~~ 69 (390)
T 3b8x_A 8 LASSTWDDLEYKAIQSVLDSKM--------FTM-GEYVKQ----YETQFAKTFGSKY-----AVMVSSGSTANLLMIAAL 69 (390)
T ss_dssp SCCCCCCHHHHHHHHHHHHHTC--------CSS-CHHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHcCC--------CCC-ChHHHH----HHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHH
Confidence 4677899999999988775421 111 233333 4567999999874 578889999999999998
Q ss_pred -------ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015647 238 -------LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 238 -------l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
+++||+|++...+|.+.. ..+...| ++++.++++++++.+|+++|++++++ ++++|++..
T Consensus 70 ~~~~~~~~~~g~~Vi~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~- 136 (390)
T 3b8x_A 70 FFTKKPRLKKGDEIIVPAVSWSTTY---------YPLQQYG--LRVKFVDIDINTLNIDIESLKEAVTD-STKAILTVN- 136 (390)
T ss_dssp TSSSSCSCCTTCEEEEESSSCHHHH---------HHHHHTT--CEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEEC-
T ss_pred HhhhhcCCCCcCEEEECCCCcHHHH---------HHHHHcC--CEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEEC-
Confidence 889999999998875543 1223333 46677778765688999999999875 678877752
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcC--cCCCcCCceEEEEEeCC
Q 015647 311 SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTT--HKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~St--HKtL~GP~GG~I~~~~~ 379 (403)
.+|.+.|+++|.++|+++|++|++|++|+.|....+. .++ ..|+.++|. .|.+.++.||+++++++
T Consensus 137 ~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~ 205 (390)
T 3b8x_A 137 LLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNK---CAGTFGLMGTFSSFYSNHIATMEGGCIVTDDE 205 (390)
T ss_dssp GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCSSSCEEEEESCH
T ss_pred CccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCc---ccccccceEEEEccCCCCCccCCceEEEeCCH
Confidence 4567799999999999999999999999998765321 111 246666543 34477778899998763
No 52
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.75 E-value=2.2e-17 Score=170.27 Aligned_cols=178 Identities=12% Similarity=0.024 Sum_probs=130.1
Q ss_pred cchHHHHHHHHHHHHHHHHHcCCCCCCC-------cceEEeCChHHHHHHHHhhhcc-------------------CCCe
Q 015647 190 TGNQYIDQIENLCFERALKAFDLDSDNW-------GVNVQPYSCTSANFAVYTGLLL-------------------PGDR 243 (403)
Q Consensus 190 ~G~~~~~~lE~~arerla~lfg~~~~~~-------~v~V~~~SGT~An~aal~all~-------------------pGD~ 243 (403)
...+...++|+.+.++++++||.+...| +..+++++||+||+.++.+... ++++
T Consensus 111 ~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~ 190 (481)
T 4e1o_A 111 ASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLV 190 (481)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEE
T ss_pred CCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeE
Confidence 3456778899999999999999975321 1246778899999998876532 5778
Q ss_pred EEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCC-----CcEEEEe--CCCCCccc
Q 015647 244 IMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR-----PKILICG--GSSYPREW 316 (403)
Q Consensus 244 VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~-----pklViv~--~s~~g~~~ 316 (403)
|+++...|.+.. +.+.+.| .+++.++++ +++.+|+++|+++|++.+ |.+|++. .+.+|.+.
T Consensus 191 v~~s~~~H~s~~---------~~~~~~g--~~~~~v~~~-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id 258 (481)
T 4e1o_A 191 AYASDQAHSSVE---------KAGLISL--VKMKFLPVD-DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFD 258 (481)
T ss_dssp EEEETTSCHHHH---------HHHHHHT--CEEEEECCC-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC
T ss_pred EEEcCcchHHHH---------HHHHhCC--CceEEEEcC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcC
Confidence 998887643321 2334444 355666666 478999999999997532 5555543 34568889
Q ss_pred cHHHHHHHHHHcCCEEEEeccccccccccccccC---CCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 317 DYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS---PFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 317 Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~---p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
|+++|+++|+++|+++|+|+||+.+.+..+.... .++.+|++++++||+|.+|.| |++++++.
T Consensus 259 ~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~ 325 (481)
T 4e1o_A 259 CLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDK 325 (481)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBH
T ss_pred CHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCH
Confidence 9999999999999999999999988654332221 223479999999999999987 78887764
No 53
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.74 E-value=1.9e-17 Score=163.11 Aligned_cols=199 Identities=23% Similarity=0.295 Sum_probs=143.4
Q ss_pred ccceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015647 153 GIELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
-|.+..+ +++ +|.+.+++...+.. +..++++.++..|. +...+ .++++++++|.+. .|+++||+
T Consensus 45 ~id~~~~-~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~~~~~-----~i~~~sGt 113 (399)
T 3tqx_A 45 VLNFCAN-NYLGLADHPALIKTAQTVVEQ-YGFGMASVRFICGTQTIHKE----LEKDISEFLGTDD-----TILYSSCF 113 (399)
T ss_dssp EEECSSC-CTTSCTTCHHHHHHHHHHHHH-HCSCCCSCCCCCCCBHHHHH----HHHHHHHHHTCSE-----EEEESCHH
T ss_pred EEEeecc-CcccccCCHHHHHHHHHHHHH-hCCCCCCcCccccCchHHHH----HHHHHHHHHCCCc-----EEEECchH
Confidence 3555544 543 68999999887754 54455566665554 33333 4567999999874 57888999
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-----CC
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-----RP 302 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-----~p 302 (403)
+|+.+++.+++++||+|++....|++.. ..+...+ .+++.++. +|+++|++++++. ++
T Consensus 114 ~a~~~~l~~~~~~gd~v~~~~~~~~~~~---------~~~~~~g--~~~~~~~~------~d~~~l~~~l~~~~~~~~~~ 176 (399)
T 3tqx_A 114 DANGGLFETLLGPEDAIISDELNHASII---------DGIRLCK--AQRYRYKN------NAMGDLEAKLKEADEKGARF 176 (399)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHH---------HHHHSCC--SEEEEECT------TCTTHHHHHHHHHHTTTCSS
T ss_pred HHHHHHHHHhcCCCCEEEECCcccHHHH---------HHHHHcC--CceeEeCC------CCHHHHHHHHHhhhccCCCc
Confidence 9999999999999999999988765532 1223333 34454442 6788999988753 68
Q ss_pred cEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccc---c-CC-CCcccEEEEcCcCCCcCCceEEEE
Q 015647 303 KILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL---A-SP-FDYCDIVTSTTHKSLRGPRGGIIF 375 (403)
Q Consensus 303 klViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~---~-~p-~~~aDivt~StHKtL~GP~GG~I~ 375 (403)
++|++... .+|...|+++|.++|+++|+++++|++|+.|....... . .. ....|+++.|+||+|+|++||+++
T Consensus 177 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~ 256 (399)
T 3tqx_A 177 KLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTS 256 (399)
T ss_dssp EEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEE
T ss_pred eEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEE
Confidence 88887654 35778899999999999999999999998776432110 0 01 124699999999999889999999
Q ss_pred EeCC
Q 015647 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
.+++
T Consensus 257 ~~~~ 260 (399)
T 3tqx_A 257 GHKE 260 (399)
T ss_dssp ECHH
T ss_pred cCHH
Confidence 8764
No 54
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.74 E-value=1.7e-17 Score=171.03 Aligned_cols=178 Identities=10% Similarity=0.013 Sum_probs=130.2
Q ss_pred cchHHHHHHHHHHHHHHHHHcCCCCCC------CcceEEeCChHHHHHHHHhhhc-------------------cCCCeE
Q 015647 190 TGNQYIDQIENLCFERALKAFDLDSDN------WGVNVQPYSCTSANFAVYTGLL-------------------LPGDRI 244 (403)
Q Consensus 190 ~G~~~~~~lE~~arerla~lfg~~~~~------~~v~V~~~SGT~An~aal~all-------------------~pGD~V 244 (403)
...+...++|+.+.+++++++|.+... ++..+++++||+||+.++.+.. .++++|
T Consensus 106 ~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v 185 (475)
T 3k40_A 106 IASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVG 185 (475)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEE
T ss_pred cCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEE
Confidence 445777899999999999999998521 1124677889999998887652 135688
Q ss_pred EecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCC-----CcEEEEe--CCCCCcccc
Q 015647 245 MGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR-----PKILICG--GSSYPREWD 317 (403)
Q Consensus 245 L~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~-----pklViv~--~s~~g~~~D 317 (403)
+++...|.+.. +.+.+.| .+++.+++++ ++ +|+++|+++|++.+ |++|++. .+.+|.+.|
T Consensus 186 i~s~~~H~s~~---------~~~~~~g--~~~~~v~~d~-~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~ 252 (475)
T 3k40_A 186 YCSDQAHSSVE---------RAGLLGG--VKLRSVQSEN-HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY 252 (475)
T ss_dssp EEETTSCHHHH---------HHHHHHT--CEEEEECCBT-TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred EECCCchHHHH---------HHHHHcC--CceEEEECCC-CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC
Confidence 88887753321 2334444 3566667774 67 99999999997532 5555543 345688999
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccccccccC---CCCcccEEEEcCcCCCcCCce-EEEEEeCCC
Q 015647 318 YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS---PFDYCDIVTSTTHKSLRGPRG-GIIFFRRGK 380 (403)
Q Consensus 318 i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~---p~~~aDivt~StHKtL~GP~G-G~I~~~~~~ 380 (403)
+++|+++|+++|+++|+|+||+.|.+..+.... .++.+|++++++||+|++|.| |++++++..
T Consensus 253 l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~ 319 (475)
T 3k40_A 253 LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPS 319 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGG
T ss_pred HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHH
Confidence 999999999999999999999988654332221 223479999999999999987 888887754
No 55
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.74 E-value=6.8e-17 Score=162.92 Aligned_cols=189 Identities=17% Similarity=0.206 Sum_probs=139.6
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCC
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPG 241 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pG 241 (403)
.++.|++++...+.. |..+++++++..|. +...++ ++++++++|.+. .++++||++||..++.+++++|
T Consensus 79 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~~~~~~~l----~~~la~~~g~~~-----~i~~~sGs~a~~~al~~l~~~g 148 (427)
T 2w8t_A 79 FDPDVIAAGKEALEK-FGSGTCGSRMLNGTFHDHMEV----EQALRDFYGTTG-----AIVFSTGYMANLGIISTLAGKG 148 (427)
T ss_dssp GCHHHHHHHHHHHHH-HCSCCCSCTTTTCCCHHHHHH----HHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCTT
T ss_pred CCHHHHHHHHHHHHH-hCCCCcccccccCCcHHHHHH----HHHHHHHhCCCc-----eEEecCcHHHHHHHHHHhcCCC
Confidence 578999999887754 44456666666664 444444 456899999864 5788999999999999999999
Q ss_pred CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC---CCcEEEEeCC--CCCccc
Q 015647 242 DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY---RPKILICGGS--SYPREW 316 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~---~pklViv~~s--~~g~~~ 316 (403)
|+|++....|++.. ..+...| .+++.++ .+|+++|++++++. ++++|++... ..|.+.
T Consensus 149 d~vl~~~~~h~~~~---------~~~~~~g--~~~~~~~------~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~ 211 (427)
T 2w8t_A 149 EYVILDADSHASIY---------DGCQQGN--AEIVRFR------HNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIA 211 (427)
T ss_dssp CEEEEETTCCHHHH---------HHHHHSC--SEEEEEC------TTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEEC
T ss_pred CEEEECCcccHHHH---------HHHHHcC--CeeEEeC------CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc
Confidence 99999887765432 1233344 3445443 37999999999764 5788887653 357788
Q ss_pred cHHHHHHHHHHcCCEEEEecccccccccc-cc-cc--CCC-CcccEEEEcCcCCCcCCceEEEEEeCC
Q 015647 317 DYGRFRQIADKCGAVLMCDMAHISGLIAA-KE-LA--SPF-DYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 317 Di~~I~~Iake~Ga~LivDaAh~~Glia~-g~-~~--~p~-~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
|+++|.++|+++|++|++|++|+.|.... +. .. ..+ +.+|++++|+||+| |+.||+++++++
T Consensus 212 ~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~-g~~gG~v~~~~~ 278 (427)
T 2w8t_A 212 PLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSV-GTVGGFVVSNHP 278 (427)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTT-CSCCEEEEECCT
T ss_pred CHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhh-ccCCCEEEeCHH
Confidence 99999999999999999999999887641 11 00 111 14799999999998 588899998764
No 56
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.74 E-value=2.3e-17 Score=170.45 Aligned_cols=175 Identities=14% Similarity=0.098 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCC--CCCCcceEEeCChHHHHHHHHhhhcc--------CC-----C-eEEecCCCCCcccc
Q 015647 193 QYIDQIENLCFERALKAFDLD--SDNWGVNVQPYSCTSANFAVYTGLLL--------PG-----D-RIMGLDSPSGGHLS 256 (403)
Q Consensus 193 ~~~~~lE~~arerla~lfg~~--~~~~~v~V~~~SGT~An~aal~all~--------pG-----D-~VL~~~~ehgghls 256 (403)
+...++|+.+++++++++|++ .. ..+++++||+||+.++.++.. +| + +|+++...|.+..
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~~~---~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~- 203 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSKDG---DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK- 203 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSC---EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH-
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCC---CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH-
Confidence 566789988889999999997 42 235556799999999888742 57 6 6888776653321
Q ss_pred ccccCCccchhhhcccce-EEeeeecCCCCCCCCHHHHHHHhccC-----CCcEEEEeC--CCCCccccHHHHHHHHHHc
Q 015647 257 HGYHTPGGKKVSAASIFF-ESFPYKVNPQTGYIDYEKLEEKAMDY-----RPKILICGG--SSYPREWDYGRFRQIADKC 328 (403)
Q Consensus 257 h~~~~~~~~~v~~~g~~~-~vv~~~vd~~~g~ID~d~Le~~i~~~-----~pklViv~~--s~~g~~~Di~~I~~Iake~ 328 (403)
+.+...+.+. +++.+++++ ++.+|+++|++++.+. +|++|++.. +.+|.+.|+++|+++|+++
T Consensus 204 --------~~~~~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~ 274 (504)
T 2okj_A 204 --------KAGAALGFGTDNVILIKCNE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKY 274 (504)
T ss_dssp --------HHHHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHH
T ss_pred --------HHHHHcCCCcccEEEEecCC-CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHc
Confidence 2334444432 455566663 6899999999999752 477777653 3467889999999999999
Q ss_pred CCEEEEeccccccccccccccCCC---CcccEEEEcCcCCCcCCce-EEEEEeCCC
Q 015647 329 GAVLMCDMAHISGLIAAKELASPF---DYCDIVTSTTHKSLRGPRG-GIIFFRRGK 380 (403)
Q Consensus 329 Ga~LivDaAh~~Glia~g~~~~p~---~~aDivt~StHKtL~GP~G-G~I~~~~~~ 380 (403)
|+++|+|++|+.+......+...+ ..+|++++++||++++|.| |++++++..
T Consensus 275 g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~ 330 (504)
T 2okj_A 275 NLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKG 330 (504)
T ss_dssp TCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTT
T ss_pred CCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHH
Confidence 999999999998876533222222 3589999999999988875 888888753
No 57
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.74 E-value=3.4e-17 Score=164.05 Aligned_cols=196 Identities=15% Similarity=0.103 Sum_probs=136.3
Q ss_pred ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhh
Q 015647 158 ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTG 236 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~a 236 (403)
+....+++.+++++...+.... .+. ..+..|. +..++ +++++++++|.+. .|+++|||+|+.+++.+
T Consensus 9 p~~~~~~~~~~~a~~~~~~~~~-~~~--~~~~~g~~~l~~~----l~~~la~~~g~~~-----~i~~~~gt~al~~~~~~ 76 (418)
T 2c81_A 9 PEWPQHSDRTRRKIEEVFQSNR-WAI--SGYWTGEESMERK----FAKAFADFNGVPY-----CVPTTSGSTALMLALEA 76 (418)
T ss_dssp CCSSCCCHHHHHHHHHHHHHTC-CST--TSBCCSSCCHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHhcCC-ccc--cCcccCCHHHHHH----HHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHH
Confidence 3445678999999988776521 110 0112232 12333 4567899999874 47788999999999999
Q ss_pred h-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCcc
Q 015647 237 L-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315 (403)
Q Consensus 237 l-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~ 315 (403)
+ +++||+|++....|.+.. ..+...| .+++.++++++++.+|+++|++++++ ++++|++.. .+|..
T Consensus 77 ~~~~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~ 143 (418)
T 2c81_A 77 LGIGEGDEVIVPSLTWIATA---------TAVLNVN--ALPVFVDVEADTYCIDPQLIKSAITD-KTKAIIPVH-LFGSM 143 (418)
T ss_dssp TTCCTTCEEEEESSSCTHHH---------HHHHHTT--CEEEEECBCTTTCSBCHHHHGGGCCT-TEEEECCBC-CTTCC
T ss_pred cCCCCcCEEEECCCccHhHH---------HHHHHcC--CEEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEEeC-CcCCc
Confidence 9 899999999998765542 1233334 45667777655678999999998874 678877653 56888
Q ss_pred ccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceEEEEEeC
Q 015647 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 316 ~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG~I~~~~ 378 (403)
.|+++|.++|+++|++|++|++|+.|....+.....+..+++.+++.||++++.+||++++++
T Consensus 144 ~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~ 206 (418)
T 2c81_A 144 ANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKN 206 (418)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESC
T ss_pred ccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECC
Confidence 999999999999999999999999986322211111212344444459998655779998864
No 58
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.74 E-value=3.4e-17 Score=159.98 Aligned_cols=184 Identities=15% Similarity=0.125 Sum_probs=131.0
Q ss_pred cCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-
Q 015647 159 SENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL- 237 (403)
Q Consensus 159 Sen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al- 237 (403)
+.+.+++.|++++...+...+ .++ + +... .+++.+++++|.+. .++++|||+|+.+++.++
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~~------~-~~~~----~l~~~la~~~~~~~-----v~~~~ggt~al~~~~~~~~ 68 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LTQ------G-KRSL----LFEEALCEFLGVKH-----ALVFNSATSALLTLYRNFS 68 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CSS------S-HHHH----HHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHSS
T ss_pred CCCCCCHHHHHHHHHHHHcCc--ccC------C-hHHH----HHHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhc
Confidence 467899999999998775422 122 1 2222 24667999999873 366778999999999999
Q ss_pred --ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCcc
Q 015647 238 --LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315 (403)
Q Consensus 238 --l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~ 315 (403)
+++||+|++....|.+.. ..+...| ++++.++++++ +.+|+++|++++.+ ++++|++... +|..
T Consensus 69 ~~~~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~~-~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~ 134 (375)
T 2fnu_A 69 EFSADRNEIITTPISFVATA---------NMLLESG--YTPVFAGIKND-GNIDELALEKLINE-RTKAIVSVDY-AGKS 134 (375)
T ss_dssp CCCTTSCEEEECSSSCTHHH---------HHHHHTT--CEEEECCBCTT-SSBCGGGSGGGCCT-TEEEEEEECG-GGCC
T ss_pred ccCCCCCEEEECCCccHhHH---------HHHHHCC--CEEEEeccCCC-CCCCHHHHHhhcCc-CceEEEEeCC-cCCc
Confidence 899999999998775543 1223333 45667777753 58999999998864 5787666554 8888
Q ss_pred ccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEE
Q 015647 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFF 376 (403)
Q Consensus 316 ~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~ 376 (403)
.|+++|.++|+++|+++++|++|+.|....+.....+..+++.++|.||++ || | |+++.
T Consensus 135 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~-~~-g~g~~~~ 194 (375)
T 2fnu_A 135 VEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPI-TT-AEGGAVV 194 (375)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSS-CC-SSCEEEE
T ss_pred cCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCc-cc-cCceEEE
Confidence 999999999999999999999999886543211111112445566667988 55 4 55554
No 59
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.74 E-value=1.2e-17 Score=162.81 Aligned_cols=197 Identities=12% Similarity=0.056 Sum_probs=134.0
Q ss_pred cCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHH-HHHHcCCCCCCCcceEEeCChHHHHHHHHhhh
Q 015647 159 SENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFER-ALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 159 Sen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arer-la~lfg~~~~~~~v~V~~~SGT~An~aal~al 237 (403)
+...+++.|++++...+......++ +..+..+....... ..++++ +++++|.+ . .++.++||+|+.+++.++
T Consensus 17 ~~~~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~la~~~~~~-~----v~~~~g~t~a~~~~~~~~ 89 (371)
T 2e7j_A 17 TGGKLTEEARQALLEWGDGYSVCDF-CTTGRLDEIKTPPI-HDFIHNQLPKFLGCD-V----ARVTNGAREAKFAVMHSL 89 (371)
T ss_dssp HTCCCCHHHHHHHHHC---------------------CCH-HHHHHTHHHHHTTSS-E----EEEESSHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhhcccCCc-cccccchhhHHHHH-HHHHHHHHHHHcCCC-E----EEEeCChHHHHHHHHHHH
Confidence 3567899999999876643211001 10011011111122 235778 99999987 2 344556689999999999
Q ss_pred ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee--cCCCCCCCCHHHHHHHhcc----CCCcEEEEeCCC
Q 015647 238 LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK--VNPQTGYIDYEKLEEKAMD----YRPKILICGGSS 311 (403)
Q Consensus 238 l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~--vd~~~g~ID~d~Le~~i~~----~~pklViv~~s~ 311 (403)
+++||+|++....|.+... .+...| ++++.++ +++ ++.+|+++|++++++ .++++|++...+
T Consensus 90 ~~~gd~vl~~~~~~~~~~~---------~~~~~g--~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~ 157 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSYV---------AAERAG--LNIALVPKTDYP-DYAITPENFAQTIEETKKRGEVVLALITYPD 157 (371)
T ss_dssp CCTTCEEEEETTCCHHHHH---------HHHHTT--CEEEEECCCCTT-TCCCCHHHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred hCCCCEEEEccCcchHHHH---------HHHHcC--CeEEEeecccCC-CCCcCHHHHHHHHHhhcccCCeEEEEEECCC
Confidence 9999999999987655431 233344 3555666 664 578999999999974 367887776543
Q ss_pred --CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 312 --YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 312 --~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+|...|+++|.++|+++|+++++|++|+.|..+. ++. .+|++++|+||+|++|.+ |+++++++
T Consensus 158 nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~-----~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~ 225 (371)
T 2e7j_A 158 GNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPV-----SLKEIGADFIVGSGHKSMAASGPIGVMGMKEE 225 (371)
T ss_dssp TTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCC-----CHHHHTCSEEEEEHHHHSSCCSSCEEEEECTT
T ss_pred CCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCC-----ChhhcCCCEEEecCCcCCCCCCCcEEEEEech
Confidence 5788899999999999999999999999886431 121 379999999999987755 89988875
No 60
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.74 E-value=2e-17 Score=165.44 Aligned_cols=196 Identities=17% Similarity=0.177 Sum_probs=132.6
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015647 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
-...++++++++.+.+.+++.. +.+. ..++...|+ +.+..++++ +++++++|.+. .++++||++|+.
T Consensus 28 ~~~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~r~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~ 94 (398)
T 1gc0_A 28 LVPPVYQTATFTFPTVEYGAAC-FAGE-QAGHFYSRI--SNPTLNLLE----ARMASLEGGEA-----GLALASGMGAIT 94 (398)
T ss_dssp SSCCBCCCSCBCCC-------------------------CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHH
T ss_pred cCCCccCCCccccCCHHHHHHh-hcCC-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHH
Confidence 3567888999999998888752 2222 123333333 345555444 56899999874 578899999999
Q ss_pred HHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC
Q 015647 232 AVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311 (403)
Q Consensus 232 aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~ 311 (403)
+++.+++++||+|++....|+++..... ......| +++..+++ .|++++++++++ ++++|++...+
T Consensus 95 ~~l~~~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~~g--~~~~~~~~------~d~~~l~~~i~~-~~~~v~~~~~~ 160 (398)
T 1gc0_A 95 STLWTLLRPGDEVLLGNTLYGCTFAFLH-----HGIGEFG--VKLRHVDM------ADLQALEAAMTP-ATRVIYFESPA 160 (398)
T ss_dssp HHHHHHCCTTCEEEEESSCCSHHHHHHH-----HTGGGGT--CEEEEECT------TCHHHHHHHCCT-TEEEEEEESSC
T ss_pred HHHHHHhcCCCEEEEeCCCchhHHHHHH-----HHHHHcC--CEEEEECC------CCHHHHHHhcCC-CCeEEEEECCC
Confidence 9999999999999999988876532100 0001222 44555443 389999999875 68888887544
Q ss_pred --CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015647 312 --YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 312 --~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
+|.+.|+++|.++|+++|+++++|++|+.|... .++. .+|+++.|+||+|+||. ||+++++++
T Consensus 161 nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~ 229 (398)
T 1gc0_A 161 NPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQ-----RPLELGADLVVHSATKYLSGHGDITAGIVVGSQA 229 (398)
T ss_dssp TTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHC-----CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHH
T ss_pred CCCcccccHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhCceEEEECCccccCCCCCCeEEEEEEChH
Confidence 467899999999999999999999999988653 2333 38999999999998876 688888764
No 61
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.74 E-value=2.7e-17 Score=162.18 Aligned_cols=184 Identities=15% Similarity=0.105 Sum_probs=138.3
Q ss_pred ccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-cc
Q 015647 161 NFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-LL 239 (403)
Q Consensus 161 n~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l~ 239 (403)
...++.+++++...+...+ +.. .+...+ .++.+++++|.+. .++++|||+|+.+++.++ ++
T Consensus 16 p~~~~~~~~a~~~~~~~~~--------~~~-~~~~~~----l~~~la~~~~~~~-----~~~~~~gt~al~~~~~~~~~~ 77 (393)
T 1mdo_A 16 PAMGAEELAAVKTVLDSGW--------ITT-GPKNQE----LEAAFCRLTGNQY-----AVAVSSATAGMHIALMALGIG 77 (393)
T ss_dssp CCCCHHHHHHHHHHHHHTC--------CSS-SHHHHH----HHHHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHhcCC--------cCC-ChHHHH----HHHHHHHHhCCCc-----EEEecChHHHHHHHHHHcCCC
Confidence 3467899999888776532 111 122333 4567999999874 467789999999999999 99
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHH
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYG 319 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~ 319 (403)
+||+|++....|.+.. ..+...| .+++.++++++++.+|+++|++++++ ++++|++.. .+|...|++
T Consensus 78 ~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~-~~G~~~~~~ 144 (393)
T 1mdo_A 78 EGDEVITPSMTWVSTL---------NMIVLLG--ANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPVH-YAGAPADLD 144 (393)
T ss_dssp TTCEEEEESSSCHHHH---------HHHHHTT--CEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCBC-GGGCCCCHH
T ss_pred CCCEEEeCCCccHhHH---------HHHHHCC--CEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEeC-CCCCcCCHH
Confidence 9999999988765542 1233334 45667777765578999999999875 678877653 577788999
Q ss_pred HHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCc--CCCcCCceEEEEEeC
Q 015647 320 RFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTH--KSLRGPRGGIIFFRR 378 (403)
Q Consensus 320 ~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StH--KtL~GP~GG~I~~~~ 378 (403)
+|.++|+++|+++++|++|+.|....+. ++...|++++|+| |+|.|++||++++++
T Consensus 145 ~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~ 202 (393)
T 1mdo_A 145 AIYALGERYGIPVIEDAAHATGTSYKGR---HIGARGTAIFSFHAIKNITCAEGGIVVTDN 202 (393)
T ss_dssp HHHHHHHHHTCCBCEECTTCTTCEETTE---ETTSSSEEEEECCTTSSSCSSSCEEEEESC
T ss_pred HHHHHHHHcCCeEEEECccccCCeECCe---ecCCCCeEEEeCCCCCccccccceEEEeCC
Confidence 9999999999999999999988654321 1111799999999 999888899999864
No 62
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.74 E-value=5.1e-17 Score=167.50 Aligned_cols=203 Identities=14% Similarity=0.041 Sum_probs=141.0
Q ss_pred ccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh---
Q 015647 161 NFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL--- 237 (403)
Q Consensus 161 n~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al--- 237 (403)
+.+++.|++++...+.+. +...+...+...++|+.+++++++++|++... ..+++++||+||+.++.++
T Consensus 110 ~~~~~~v~~~~~~~~~n~------~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~--~~~~t~ggt~a~~~al~~ar~~ 181 (497)
T 2qma_A 110 PPLMPAVAAEAMIAALNQ------SMDSWDQASSATYVEQKVVNWLCDKYDLSEKA--DGIFTSGGTQSNQMGLMLARDW 181 (497)
T ss_dssp CCBHHHHHHHHHHHHHCC------CTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC--EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhcc------cccchhhChHHHHHHHHHHHHHHHHhCCCCCC--CeEEcCCchHHHHHHHHHHHHH
Confidence 456888888886655432 11122334567889998999999999996422 2456678999999988873
Q ss_pred -c---------cC------CC-eEEecCCCCCccccccccCCccchhhhcccce-EEeeeecCCCCCCCCHHHHHHHhcc
Q 015647 238 -L---------LP------GD-RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFF-ESFPYKVNPQTGYIDYEKLEEKAMD 299 (403)
Q Consensus 238 -l---------~p------GD-~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~-~vv~~~vd~~~g~ID~d~Le~~i~~ 299 (403)
+ ++ || +|+++...|.+.. +.+...+.+. +++.+++++ ++.+|+++|++++++
T Consensus 182 ~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~---------~~~~~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~ 251 (497)
T 2qma_A 182 IADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQ---------KSASWMGLGEKAVMTVDANA-DGTMDITKLDEVIAQ 251 (497)
T ss_dssp HHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHH---------HHHHHTTSCGGGEEEECBCT-TSSBCGGGHHHHHHH
T ss_pred HHHhhcccchhhcccccccCCeEEEECCCchHHHH---------HHHHHcCCCcccEEEEecCC-CCcCCHHHHHHHHHH
Confidence 3 13 46 7888776654321 2334444322 355566663 688999999999875
Q ss_pred C---C--CcEEEEe--CCCCCccccHHHHHHHHHHcCCEEEEecccccccccccccc---CCCCcccEEEEcCcCCCcCC
Q 015647 300 Y---R--PKILICG--GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA---SPFDYCDIVTSTTHKSLRGP 369 (403)
Q Consensus 300 ~---~--pklViv~--~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~---~p~~~aDivt~StHKtL~GP 369 (403)
. . |.+|++. .+.+|...|+++|+++|+++|++||+|+||+.+..... .. ..++.+|++++++||+|++|
T Consensus 252 ~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p 330 (497)
T 2qma_A 252 AKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQT 330 (497)
T ss_dssp HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCC
T ss_pred HHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCC
Confidence 3 2 3355553 23467889999999999999999999999998876543 11 11235899999999999998
Q ss_pred ce-EEEEEeCCCCC
Q 015647 370 RG-GIIFFRRGKKP 382 (403)
Q Consensus 370 ~G-G~I~~~~~~~~ 382 (403)
.+ |+++++++..+
T Consensus 331 ~~~G~l~~~~~~~~ 344 (497)
T 2qma_A 331 ISCGALLVNDKSNF 344 (497)
T ss_dssp SSCEEEEESCGGGG
T ss_pred cceEEEEEeCHHHH
Confidence 76 88888765433
No 63
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.74 E-value=6.2e-17 Score=160.21 Aligned_cols=207 Identities=17% Similarity=0.127 Sum_probs=141.4
Q ss_pred cceecc-CccCcHHHHHHHHHHhhhcCCCCCCCC-ccccchHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCChHHHH
Q 015647 154 IELIAS-ENFVCRAVMEALGSHLTNKYSEGYPGA-RYYTGNQYIDQIENLCFERALKAFDL-DSDNWGVNVQPYSCTSAN 230 (403)
Q Consensus 154 l~LiaS-en~~~p~V~eA~~s~l~~~y~eG~pgs-r~~~G~~~~~~lE~~arerla~lfg~-~~~~~~v~V~~~SGT~An 230 (403)
+.|-.+ ....++.|++++...+.+.+ +++++ .+..+......++ .+++.+++++|. +++ ..++++|||+|+
T Consensus 30 i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~y~~~~~~~~~-~l~~~la~~~~~~~~~---~v~~~~g~t~a~ 103 (420)
T 1t3i_A 30 VYLDNAATSQKPRAVLEKLMHYYENDN--ANVHRGAHQLSVRATDAYE-AVRNKVAKFINARSPR---EIVYTRNATEAI 103 (420)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHHTC--CCC--CCSHHHHHHHHHHH-HHHHHHHHHTTCSCGG---GEEEESSHHHHH
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcc--CCCCcccchHHHHHHHHHH-HHHHHHHHHcCCCCCC---eEEEcCChHHHH
Confidence 444333 33568999999988876532 34432 2212222223344 367889999998 443 235566789999
Q ss_pred HHHHhhh----ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEE
Q 015647 231 FAVYTGL----LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 231 ~aal~al----l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
.+++.++ +++||+|++....|.++.. .+ ...+...| .+++.++++ +++.+|+++|++++++ ++++|+
T Consensus 104 ~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~-~~----~~~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~ 174 (420)
T 1t3i_A 104 NLVAYSWGMNNLKAGDEIITTVMEHHSNLV-PW----QMVAAKTG--AVLKFVQLD-EQESFDLEHFKTLLSE-KTKLVT 174 (420)
T ss_dssp HHHHHHTHHHHCCTTCEEEEETTCCGGGTH-HH----HHHHHHHC--CEEEEECBC-TTSSBCHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHhhhcccCCCCEEEECcchhHHHHH-HH----HHHHHhcC--cEEEEeccC-CCCCcCHHHHHHhhCC-CceEEE
Confidence 9999999 8999999999988765421 00 01112233 455666665 3677999999999874 678887
Q ss_pred EeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 307 CGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 307 v~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+...+ +|...|+++|.++|+++|+++++|++|+.|....... .+ .+|++++|+||. .||.| |+++.+++
T Consensus 175 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~-~~di~~~s~sK~-~~~~g~G~~~~~~~ 246 (420)
T 1t3i_A 175 VVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQ--LI-DCDWLVASGHKM-CAPTGIGFLYGKEE 246 (420)
T ss_dssp EESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHH--HH-TCSEEEEEGGGT-TSCTTCEEEEECHH
T ss_pred EeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchh--hc-CCCEEEEehhhh-cCCCceEEEEEchH
Confidence 76543 5788999999999999999999999999876431110 01 389999999995 56765 88888754
No 64
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.73 E-value=5.6e-17 Score=164.17 Aligned_cols=193 Identities=18% Similarity=0.150 Sum_probs=135.3
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHH
Q 015647 153 GIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFA 232 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~a 232 (403)
...+..+.+|+.+.+.++.... .+. ..|+.++|+ +++...++ ++++++++|.+. .|+++|||+|+.+
T Consensus 22 ~~pi~~~~~~~~~~~~~~~~~~-~~~-~~~~~y~~~--~~~~~~~l----~~~la~~~g~~~-----~v~~~sGt~A~~~ 88 (421)
T 2ctz_A 22 QVPIYPTTSYVFKSPEHAANLF-ALK-EFGNIYSRI--MNPTVDVL----EKRLAALEGGKA-----ALATASGHAAQFL 88 (421)
T ss_dssp SCCBCCCSCBCCSCHHHHHHHH-TTT-TGGGSCBTT--BCHHHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHH
T ss_pred cCCeeccceeeeCCHHHHHHhh-ccc-cCCCcccCC--CChHHHHH----HHHHHHHhCCCc-----eEEecCHHHHHHH
Confidence 3567778888877766654322 211 123444444 34444444 456999999875 4788899999999
Q ss_pred HHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeee-ecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC
Q 015647 233 VYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY-KVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311 (403)
Q Consensus 233 al~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~-~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~ 311 (403)
++.+++++||+|++....|++..... .......| ++++.+ ++ .|+++|++++++ ++++|++...+
T Consensus 89 ~l~~~~~~gd~vi~~~~~~~~~~~~~-----~~~~~~~g--~~~~~~~~~------~d~~~l~~~i~~-~~~~v~~~~~~ 154 (421)
T 2ctz_A 89 ALTTLAQAGDNIVSTPNLYGGTFNQF-----KVTLKRLG--IEVRFTSRE------ERPEEFLALTDE-KTRAWWVESIG 154 (421)
T ss_dssp HHHHHCCTTCEEEECSCCCHHHHHHH-----HTHHHHTT--CEEEECCTT------CCHHHHHHHCCT-TEEEEEEESSC
T ss_pred HHHHHhCCCCEEEEeCCCchHHHHHH-----HHHHHHcC--CEEEEECCC------CCHHHHHHhhcc-CCeEEEEECCC
Confidence 99999999999999998876643210 00012223 455555 43 289999999875 68888876543
Q ss_pred --CCccccHHHHHHHHHHcCCEEEEeccc-cccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEe
Q 015647 312 --YPREWDYGRFRQIADKCGAVLMCDMAH-ISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFR 377 (403)
Q Consensus 312 --~g~~~Di~~I~~Iake~Ga~LivDaAh-~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~ 377 (403)
.|.+.|+++|+++|+++|+++++|++| +.|... .++. .+|++++|+||+|+||. ||+++.+
T Consensus 155 n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~-----~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~ 222 (421)
T 2ctz_A 155 NPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL-----RPLAWGAALVTHSLTKWVGGHGAVIAGAIVDG 222 (421)
T ss_dssp TTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC-----CGGGGTCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred CCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC-----CccccCCeEEEECCcccccCCCCcEEEEEEec
Confidence 478899999999999999999999999 887421 2333 38999999999998765 5666653
No 65
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.73 E-value=3.9e-17 Score=159.97 Aligned_cols=190 Identities=14% Similarity=0.063 Sum_probs=138.0
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
+++-.+.....+ +++++...+.... |+ ..+...+ .+++++++++.+. .++++|||+|+.++
T Consensus 9 ~~l~~~~~~~~~-~~~~~~~~~~~~~--------~~-~~~~~~~----l~~~la~~~~~~~-----~~~~~~gt~a~~~~ 69 (374)
T 3uwc_A 9 SYLERQFADIEP-YLNDLREFIKTAD--------FT-LGAELEK----FEKRFAALHNAPH-----AIGVGTGTDALAMS 69 (374)
T ss_dssp CCHHHHTSSCHH-HHHHHHHHHHHTC--------CS-SCHHHHH----HHHHHHHHTTCSE-----EEEESCHHHHHHHH
T ss_pred eccccCCCCchH-HHHHHHHHHHcCC--------cc-cChhHHH----HHHHHHHHhCCCc-----EEEeCCHHHHHHHH
Confidence 445555556666 8888877665421 21 2233333 3557999999874 47788999999999
Q ss_pred Hhhh-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC
Q 015647 234 YTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY 312 (403)
Q Consensus 234 l~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~ 312 (403)
+.++ +++||+|++....|.+.. ..+...| .+++.++++ +++.+|+++|++++++ ++++|+. .+.+
T Consensus 70 ~~~~~~~~gd~v~~~~~~~~~~~---------~~~~~~g--~~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~v~~-~n~~ 135 (374)
T 3uwc_A 70 FKMLNIGAGDEVITCANTFIASV---------GAIVQAG--ATPVLVDSE-NGYVIDPEKIEAAITD-KTKAIMP-VHYT 135 (374)
T ss_dssp HHHTTCCTTCEEEEESSSCHHHH---------HHHHHTT--CEEEEECBC-TTSSBCGGGTGGGCCT-TEEEECC-BCGG
T ss_pred HHHcCCCCCCEEEECCCccHHHH---------HHHHHcC--CEEEEEecC-CCCCcCHHHHHHhCCC-CceEEEE-eCCc
Confidence 9999 999999999998765542 1233334 456666776 4688999999998875 5777773 2346
Q ss_pred CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCc--CCCcC-CceEEEEEeCC
Q 015647 313 PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTH--KSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 313 g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StH--KtL~G-P~GG~I~~~~~ 379 (403)
|...|+++|.++|+++|+++++|++|+.|....+. ++. .+|++++|+| |+|.+ +.||++++++.
T Consensus 136 G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~---~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~ 203 (374)
T 3uwc_A 136 GNIADMPALAKIAKKHNLHIVEDACQTILGRINDK---FVGSWGQFACFSLHPLKNLNVWSDAGVIITHSD 203 (374)
T ss_dssp GCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECSSSSSSCCSSCCEEEEESCH
T ss_pred CCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCe---eccccccEEEEeCCCCCcCCccceeEEEEeCCH
Confidence 77889999999999999999999999988653221 121 3799999988 99977 46788888764
No 66
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.72 E-value=2.6e-17 Score=163.42 Aligned_cols=191 Identities=11% Similarity=0.081 Sum_probs=129.3
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCC
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGD 242 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD 242 (403)
++|.|++++... + |++.. ++.+..+.+.+++ +++++++++|++. ..+++.|||+|+++++. ++++||
T Consensus 9 ~~~~~~~~~~~~----~--~~~~~-~h~~~~~~~~~~~-~~~~l~~~~~~~~----~v~~~~sgt~a~~~~~~-~~~~gd 75 (379)
T 3ke3_A 9 IDPNGLLEYSVV----Y--TDRAL-NHMSKAFQEVMND-LLSNLKTVYNAEA----AVIIPGSGTYGMEAVAR-QLTIDE 75 (379)
T ss_dssp CSTTSCCCCCSS----C--CTTSC-CTTSHHHHHHHHH-HHHHHHHHHTCSE----EEEEESCHHHHHHHHHH-HHCTTC
T ss_pred CCHHHHHHHHHh----c--cCCCC-CCCCHHHHHHHHH-HHHHHHHHhCCCC----EEEEcCChhHHHHHHHH-hCCCCC
Confidence 455555554422 2 44443 3446666665654 7899999999984 33445689999999875 457999
Q ss_pred eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC--------CCCCCHHHHHHHhccCCCcEEEEeC--CCC
Q 015647 243 RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ--------TGYIDYEKLEEKAMDYRPKILICGG--SSY 312 (403)
Q Consensus 243 ~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~--------~g~ID~d~Le~~i~~~~pklViv~~--s~~ 312 (403)
+|++....|.++ .+ .......|..++++.++++.. .+.+|++++++++++.++++|++.. +.+
T Consensus 76 ~vi~~~~~~~~~---~~----~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~ 148 (379)
T 3ke3_A 76 DCLIIRNGWFSY---RW----TQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSS 148 (379)
T ss_dssp EEEEEECSHHHH---HH----HHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTT
T ss_pred eEEEEeCCchhH---HH----HHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCC
Confidence 999987654322 10 011122233234444444321 1368999999999655788887653 346
Q ss_pred Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 313 PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 313 g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
|.+.| +++|+++|+++|++|++|++|+ |..+ ..+. .+|++++++||+|+||.| |+++.+++
T Consensus 149 G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~-----~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~ 215 (379)
T 3ke3_A 149 GIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVW-----LDMKELGIDVLISAPQKGWSSTPCAGLVMLSAA 215 (379)
T ss_dssp TEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCC-----CCHHHHTCSEEEECTTTTTCSCCCEEEEEECHH
T ss_pred ceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcc-----ccccccCCCEEEecchhhcCCCCceEEEEECHH
Confidence 78888 9999999999999999999998 7432 1222 489999999999999987 77777653
No 67
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.72 E-value=4e-17 Score=159.99 Aligned_cols=202 Identities=15% Similarity=0.104 Sum_probs=138.7
Q ss_pred CccCcHHHHHHHHHHhhhcCCCCCCCC-ccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-
Q 015647 160 ENFVCRAVMEALGSHLTNKYSEGYPGA-RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL- 237 (403)
Q Consensus 160 en~~~p~V~eA~~s~l~~~y~eG~pgs-r~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al- 237 (403)
....++.|++++...+.... ..++++ +.|. ......+ .+++.+++++|++.+ ..+++.|||+|+.+++.++
T Consensus 25 ~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~y~--~~~~~~~-~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~~~ 97 (390)
T 1elu_A 25 QGILPTVALEAITAMYGYLQ-ENGPFSIAANQ--HIQQLIA-QLRQALAETFNVDPN---TITITDNVTTGCDIVLWGLD 97 (390)
T ss_dssp CCCCCHHHHHHHHHHHHHHH-HHCSSSHHHHH--HHHHHHH-HHHHHHHHHTTSCGG---GEEEESSHHHHHHHHHHHSC
T ss_pred cCCCCHHHHHHHHHHHHHHh-ccCCcchhhHH--HHHHHHH-HHHHHHHHHcCCCHH---HEEEeCChHHHHHHHHhCCC
Confidence 34567889999988775421 111221 0111 1112233 467889999998764 2345568899999999999
Q ss_pred ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHhccCCCcEEEEeCCC--CCc
Q 015647 238 LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKAMDYRPKILICGGSS--YPR 314 (403)
Q Consensus 238 l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~ 314 (403)
+++||+|++....|.++.... .......| .+++.+++++ +++.+|+++|++++.+ ++++|++...+ +|.
T Consensus 98 ~~~gd~vl~~~~~~~~~~~~~-----~~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 169 (390)
T 1elu_A 98 WHQGDEILLTDCEHPGIIAIV-----QAIAARFG--ITYRFFPVAATLNQGDAAAVLANHLGP-KTRLVILSHLLWNTGQ 169 (390)
T ss_dssp CCTTCEEEEETTCCHHHHHHH-----HHHHHHHC--CEEEEECCGGGSSSSCHHHHHHTTCCT-TEEEEEEESBCTTTCC
T ss_pred CCCCCEEEEecCcccHHHHHH-----HHHHHHhC--cEEEEEcCCCCCCccchHHHHHHhcCC-CceEEEEeccccCCce
Confidence 899999999988775542100 00012223 3455555542 3577999999998874 67888776543 578
Q ss_pred cccHHHHHHHHH----HcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 315 EWDYGRFRQIAD----KCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 315 ~~Di~~I~~Iak----e~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
..|+++|.++|+ ++|+++++|++|+.|..+.+.. . ..+|++++|+||++.||.| |+++++++
T Consensus 170 ~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~--~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~ 236 (390)
T 1elu_A 170 VLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFS--R-LEVDYYAFTGHKWFAGPAGVGGLYIHGD 236 (390)
T ss_dssp BCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTT--T-SCCSEEEEESSSTTCCCTTCEEEEECTT
T ss_pred ecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChh--h-cCCCEEEccccccccCCCceEEEEECHH
Confidence 899999999999 9999999999999875432110 0 1389999999998888887 99998764
No 68
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.72 E-value=1.3e-16 Score=157.00 Aligned_cols=200 Identities=15% Similarity=0.119 Sum_probs=140.5
Q ss_pred cccceeccCc---cCcHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015647 152 KGIELIASEN---FVCRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 152 ~~l~LiaSen---~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
..|.+..+++ ..++.+++++...+.. +..+++.++|..|. +... ..++.+++++|++. .++++|||
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~----~l~~~la~~~g~~~-----~i~~~sGt 109 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGYSVVHQ----ALEEELAEWLGYSR-----ALLFISGF 109 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHHH----HHHHHHHHHHTCSE-----EEEESCHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHH----HHHHHHHHHhCCCc-----EEEeCCcH
Confidence 3466665554 4689999999887754 33344445554332 2222 24667999999863 57888999
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCC--CcEE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR--PKIL 305 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~--pklV 305 (403)
+|+.+++.+++++||+|++....|++.. ..+...| .+++.++ .+|+++|++++++.+ +++|
T Consensus 110 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~---------~~~~~~g--~~~~~~~------~~d~~~l~~~l~~~~~~~~~v 172 (384)
T 1bs0_A 110 AANQAVIAAMMAKEDRIAADRLSHASLL---------EAASLSP--SQLRRFA------HNDVTHLARLLASPCPGQQMV 172 (384)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHH---------HHHHTSS--SEEEEEC------TTCHHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHHHHhCCCCcEEEEcccccHHHH---------HHHHHcC--CCEEEeC------CCCHHHHHHHHHhcCCCCeEE
Confidence 9999999999999999999887765432 1233334 3445443 268999999987642 5677
Q ss_pred EEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccc-ccc-ccCCCC-cccEEEEcCcCCCcCCceEEEEEeCC
Q 015647 306 ICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIA-AKE-LASPFD-YCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 306 iv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia-~g~-~~~p~~-~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
++...+ +|.+.|+++|.++|+++|+++++|++|+.|... .+. ....++ ..|++++|+||++ ||.||+++++++
T Consensus 173 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~GG~~~~~~~ 250 (384)
T 1bs0_A 173 VTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF-GVSGAAVLCSST 250 (384)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT-SSCCEEEEECHH
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh-hccCcEEEeCHH
Confidence 766433 578899999999999999999999999887643 111 111121 3799999999987 588999998753
No 69
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.72 E-value=1.4e-16 Score=163.70 Aligned_cols=194 Identities=15% Similarity=0.137 Sum_probs=134.7
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
..+..+.+|..+..-++.. .+.... .++...|+ +++..+++| +++++++|++. .|+++||++|++++
T Consensus 79 ~Pi~~t~t~~~~~~~~~~~-~~~~~~-~~~~y~r~--~~~~~~~l~----~~lA~l~g~~~-----~v~~~sG~~Ai~~a 145 (445)
T 1qgn_A 79 TPVVNTSAYFFNKTSELID-FKEKRR-ASFEYGRY--GNPTTVVLE----EKISALEGAES-----TLLMASGMCASTVM 145 (445)
T ss_dssp CCBCCCSBBCBSSHHHHHH-HHTTSS-CCCCBGGG--CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred CCcccCCceecCCHHHHHh-hhcccc-CCccccCC--CChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHH
Confidence 4556666776544433221 222211 13333333 455555554 56899999874 58889999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCC-cEEEEeCCC-
Q 015647 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRP-KILICGGSS- 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~p-klViv~~s~- 311 (403)
+.+++++||+|++....|++..... . ..+...| +++..+++ .|+++|++++++ ++ ++|++...+
T Consensus 146 l~~l~~~Gd~Vi~~~~~y~~~~~~~--~---~~~~~~G--~~v~~v~~------~d~~~l~~ai~~-~tv~lV~le~p~N 211 (445)
T 1qgn_A 146 LLALVPAGGHIVTTTDCYRKTRIFI--E---TILPKMG--ITATVIDP------ADVGALELALNQ-KKVNLFFTESPTN 211 (445)
T ss_dssp HHHHSCSSCEEEEETTSCHHHHHHH--H---HTGGGGT--CEEEEECS------SCHHHHHHHHHH-SCEEEEEEESSCT
T ss_pred HHHHhCCCCEEEEcCCCchhHHHHH--H---HHHHHcC--CEEEEeCC------CCHHHHHHHhcc-CCCCEEEEeCCCC
Confidence 9999999999999998776643100 0 0012223 45555543 289999999986 56 998887554
Q ss_pred -CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015647 312 -YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 312 -~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.|.+.|+++|.++|+++|++|++|++|+.|.. ..+++ .+|++++|+||+++|+. +|+++.+++
T Consensus 212 ptG~v~dl~~I~~la~~~g~~livD~a~~~~~~-----~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~ 279 (445)
T 1qgn_A 212 PFLRCVDIELVSKLCHEKGALVCIDGTFATPLN-----QKALALGADLVLHSATKFLGGHNDVLAGCISGPLK 279 (445)
T ss_dssp TTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT-----CCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHH
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEECCCccccc-----CCccccCCEEEEECCcccccccccceEEEEEECHH
Confidence 46789999999999999999999999988753 23444 48999999999997764 799988764
No 70
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.72 E-value=7.4e-17 Score=160.79 Aligned_cols=194 Identities=19% Similarity=0.163 Sum_probs=141.4
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015647 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
..|.|.++++..++.|++++...+... +|..+ +...+ .++++++++|.+. .+++++||+|+.
T Consensus 31 ~~id~~~~~~~~~~~v~~a~~~~~~~~--------~y~~~-~~~~~----l~~~la~~~~~~~-----~v~~~~Gt~a~~ 92 (399)
T 2oga_A 31 PFLDLKAAYEELRAETDAAIARVLDSG--------RYLLG-PELEG----FEAEFAAYCETDH-----AVGVNSGMDALQ 92 (399)
T ss_dssp CSCCHHHHHHHTHHHHHHHHHHHHHHT--------CCSSS-HHHHH----HHHHHHHHTTSSE-----EEEESCHHHHHH
T ss_pred cccccCcCCCCCCHHHHHHHHHHHhcC--------CCCCc-hhHHH----HHHHHHHHHCCCe-----EEEecCHHHHHH
Confidence 346666666666789999998876531 12222 22333 4567999999874 477889999999
Q ss_pred HHHhhh-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015647 232 AVYTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 232 aal~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
+++.++ +++||+|++....|.+.. ..+...| .+++.++++++++.+|+++|++++++ ++++|++. +
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~-n 159 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASW---------LAVSATG--ATPVPVEPHEDHPTLDPLLVEKAITP-RTRALLPV-H 159 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHH---------HHHHHTT--CEEEEECBCSSSSSBCHHHHHHHCCT-TEEEECCB-C
T ss_pred HHHHHhCCCCcCEEEECCCccHHHH---------HHHHHCC--CEEEEEecCCCCCCcCHHHHHHhcCC-CCeEEEEe-C
Confidence 999999 899999999988765532 1233334 45666666654578999999999874 67877754 3
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCc--CCCcCC-ceEEEEEeCC
Q 015647 311 SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTH--KSLRGP-RGGIIFFRRG 379 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StH--KtL~GP-~GG~I~~~~~ 379 (403)
.+|...|+++|.++|+++|+++++|++|+.|....+. ++. .+|++++|+| |+|++| +||+++++++
T Consensus 160 ~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~ 229 (399)
T 2oga_A 160 LYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGR---RIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDP 229 (399)
T ss_dssp GGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTE---ETTCTTCEEEEECCTTSSSCCSSCCEEEEESCH
T ss_pred CcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCe---ecccccCEEEEeCCCCccCCcCCceEEEEeCCH
Confidence 4678899999999999999999999999988543221 122 3699999995 988653 7888888643
No 71
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.71 E-value=1.1e-16 Score=158.57 Aligned_cols=200 Identities=20% Similarity=0.257 Sum_probs=140.5
Q ss_pred cccceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccc-hHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh
Q 015647 152 KGIELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTG-NQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC 226 (403)
Q Consensus 152 ~~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G-~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG 226 (403)
..|.+..+ ++. ++.|++++...+.. |..++.+.+|..| .+... ..++++++++|++. .|++++|
T Consensus 46 ~~id~~~~-~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~----~l~~~la~~~g~~~-----~i~~~sG 114 (401)
T 1fc4_A 46 HVINFCAN-NYLGLANHPDLIAAAKAGMDS-HGFGMASVRFICGTQDSHK----ELEQKLAAFLGMED-----AILYSSC 114 (401)
T ss_dssp EEEECCCS-CTTSCTTCHHHHHHHHHHHHH-HCSCCCSCHHHHCCBHHHH----HHHHHHHHHHTCSE-----EEEESCH
T ss_pred cEEEeecc-CcccccCCHHHHHHHHHHHHH-hCCCCCCCCcccCCcHHHH----HHHHHHHHHhCCCc-----EEEeCCh
Confidence 34565544 443 79999999887643 4334434444333 22222 35667999999873 5778899
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-----C
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-----R 301 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-----~ 301 (403)
|+|+..++.+++++||+|++....|++.. ..+...| .+++.++ .+|+++|++++++. +
T Consensus 115 s~a~~~~~~~~~~~gd~v~~~~~~~~~~~---------~~~~~~g--~~~~~~~------~~d~~~l~~~l~~~~~~~~~ 177 (401)
T 1fc4_A 115 FDANGGLFETLLGAEDAIISDALNHASII---------DGVRLCK--AKRYRYA------NNDMQELEARLKEAREAGAR 177 (401)
T ss_dssp HHHHHTTHHHHCCTTCEEEEETTCCHHHH---------HHHHTSC--SEEEEEC------TTCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCCCEEEEcchhHHHHH---------HHHHHcC--CceEEEC------CCCHHHHHHHHHHhhccCCC
Confidence 99999999999999999999887764432 1223333 3445443 36899999988752 5
Q ss_pred CcEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccc-cccc-c--CCCC-cccEEEEcCcCCCcCCceEEE
Q 015647 302 PKILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIA-AKEL-A--SPFD-YCDIVTSTTHKSLRGPRGGII 374 (403)
Q Consensus 302 pklViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia-~g~~-~--~p~~-~aDivt~StHKtL~GP~GG~I 374 (403)
+++|++... .+|...|+++|.++|+++|+++++|++|+.|+.. .+.. + ..+. .+|++++|+||++.|+.||++
T Consensus 178 ~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~ 257 (401)
T 1fc4_A 178 HVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYT 257 (401)
T ss_dssp SEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEE
T ss_pred ceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEE
Confidence 788877643 3578899999999999999999999999888763 2211 1 1121 479999999999966779999
Q ss_pred EEeCC
Q 015647 375 FFRRG 379 (403)
Q Consensus 375 ~~~~~ 379 (403)
+++++
T Consensus 258 ~~~~~ 262 (401)
T 1fc4_A 258 AARKE 262 (401)
T ss_dssp EECHH
T ss_pred EcCHH
Confidence 98653
No 72
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.71 E-value=5.2e-17 Score=157.30 Aligned_cols=200 Identities=11% Similarity=0.033 Sum_probs=137.4
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015647 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
+.+.+.|++..+++.|++++...+.+.. .++ + +....+.+.+ +.+++++++++|....+ ..+++.|||+|+.
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~-~~~-~---~~~~~~~~~~-~~~~~~la~~~g~~~~~--~v~~~~g~t~al~ 75 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKI-GVI-S---HRSKKFEEVY-KTASDNLKTLLELPSNY--EVLFLASATEIWE 75 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTT-TTS-C---TTSHHHHHHH-HHHHHHHHHHTTCCTTE--EEEEESCHHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCc-cCc-C---CCCHHHHHHH-HHHHHHHHHHhCCCCCc--EEEEeCCchHHHH
Confidence 4578899999999999988877765422 111 1 1123333334 44788999999985322 2345668999999
Q ss_pred HHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC-
Q 015647 232 AVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS- 310 (403)
Q Consensus 232 aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s- 310 (403)
+++.+++++ ++++....+.+ +.+. ..+...| .+++.++++. ++.+|+++|+ + ..++|+|++...
T Consensus 76 ~~~~~l~~~--~~i~~~~~~~~---~~~~----~~~~~~g--~~~~~v~~~~-~~~~d~~~l~--~-~~~~~~v~~~~~~ 140 (362)
T 3ffr_A 76 RIIQNCVEK--KSFHCVNGSFS---KRFY----EFAGELG--REAYKEEAAF-GKGFYPADIT--V-PADAEIICLTHNE 140 (362)
T ss_dssp HHHHHHCSS--EEEEEECSHHH---HHHH----HHHHHTT--CEEEEEECCT-TCCCCGGGCC--C-CTTCCEEEEESEE
T ss_pred HHHHhccCC--cEEEEcCcHHH---HHHH----HHHHHhC--CCeEEEecCC-CCCCCHHHHh--c-cCCccEEEEEcCC
Confidence 999999988 54444433222 1110 1112223 4555666653 5789999998 3 357898877643
Q ss_pred -CCCccccHHHHHHHHHHc-CCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 311 -SYPREWDYGRFRQIADKC-GAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 -~~g~~~Di~~I~~Iake~-Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|..+|+++|.++|+++ |+++++|++|+.|..+ .++..+|++++|+||+|+||.| |+++.+++
T Consensus 141 nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~-----~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~~ 207 (362)
T 3ffr_A 141 TSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPK-----FDWTKIDSVFFSVQKCFGLPAGLGVWILNDR 207 (362)
T ss_dssp TTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSC-----CCTTSCSEEEEETTSTTCCCSCCEEEEEEHH
T ss_pred CCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcc-----cChhHCcEEEEecccccCCCCceEEEEECHH
Confidence 357899999999999999 9999999999987543 2233389999999999987887 77776653
No 73
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.71 E-value=2.1e-17 Score=168.95 Aligned_cols=225 Identities=13% Similarity=0.096 Sum_probs=141.9
Q ss_pred hHHHHHHHHHHHhhh-cccceeccCccCcHHHHHHHHHHhhhcCCCCCC--CCcc-----ccchHHHHHHHHHHHHHHHH
Q 015647 137 PEIFDIMEKEKQRQF-KGIELIASENFVCRAVMEALGSHLTNKYSEGYP--GARY-----YTGNQYIDQIENLCFERALK 208 (403)
Q Consensus 137 ~ei~~li~~e~~rq~-~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~p--gsr~-----~~G~~~~~~lE~~arerla~ 208 (403)
.++.+++++...... ..++ .++.+++++.|+++|.......|..++. +... +.+.+...++++.+++++++
T Consensus 66 ~~i~~~~~~~~~~~~~~yld-~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 144 (456)
T 2z67_A 66 EKIKLFLKFLSMMDTDKDPK-SVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFK 144 (456)
T ss_dssp HHHHHHHHHHHTTBGGGCTT-CEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccc-ccccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHH
Confidence 355555554433222 2333 4566788899999887643222321111 0001 11233456677789999999
Q ss_pred HcCCCCCCCcceEEeCChH-HHHHHHHhhhcc--CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec---C
Q 015647 209 AFDLDSDNWGVNVQPYSCT-SANFAVYTGLLL--PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV---N 282 (403)
Q Consensus 209 lfg~~~~~~~v~V~~~SGT-~An~aal~all~--pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v---d 282 (403)
++|++.. .+++.+|| .+|.+++.++.. +|+.|+++..+|.+.. +.+...|.. ++.+++ +
T Consensus 145 ~~g~~~~----~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~---------~~~~~~G~~--~~~v~~~~~~ 209 (456)
T 2z67_A 145 QLGLNVH----AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPI---------KAVSFVGMN--MRLVETVLDG 209 (456)
T ss_dssp HTTCCCE----EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH---------HHHHHTTCE--EEEECCEEET
T ss_pred HcCCCCC----EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHH---------HHHHHcCCC--ceEEEEeccC
Confidence 9999862 34455678 567767766543 6777888877654321 233444543 333333 3
Q ss_pred CCCCCCCHHHHHHHh-cc---CCCcEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEecccc---ccccccccccCCCC
Q 015647 283 PQTGYIDYEKLEEKA-MD---YRPKILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHI---SGLIAAKELASPFD 353 (403)
Q Consensus 283 ~~~g~ID~d~Le~~i-~~---~~pklViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~---~Glia~g~~~~p~~ 353 (403)
+++.+|+++|++++ +. .++.+|++..+ .+|.+.|+++|.++|+++|+++++|+||+ .|.++......+.
T Consensus 210 -~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~- 287 (456)
T 2z67_A 210 -DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY- 287 (456)
T ss_dssp -TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS-
T ss_pred -CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC-
Confidence 36789999999999 42 35666655544 35889999999999999999999997765 3332221100011
Q ss_pred cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 354 YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 354 ~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|++++|+||++.||.| |+++++++
T Consensus 288 ~~D~~~~s~hK~~~~p~g~G~l~~~~~ 314 (456)
T 2z67_A 288 RVDAVVSSSDKNLLTPIGGGLVYSTDA 314 (456)
T ss_dssp CCSEEEEEHHHHHCCCSSCEEEEESCH
T ss_pred CCCEEEEcCCCCcCCCCCeEEEEEcCH
Confidence 489999999999888876 88888654
No 74
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.71 E-value=1.7e-16 Score=158.32 Aligned_cols=195 Identities=14% Similarity=0.127 Sum_probs=139.8
Q ss_pred eccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015647 157 IASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 157 iaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
+.+++|+ +|.|.+++...+. +|..++.+.+.+.|. +...++ ++++++++|.+. .+++++|++||.
T Consensus 64 ~~s~~~l~~~~~p~v~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~-----~i~~~sGt~a~~ 133 (409)
T 3kki_A 64 LQSNDYLALANHPLIKARLAKSLL-EEQQSLFMSASFLQNDYDKPMI----EKRLAKFTGFDE-----CLLSQSGWNANV 133 (409)
T ss_dssp CCCSCTTCCTTCHHHHHHHHHHHH-SCCCCCCSBGGGGCSTTTSCHH----HHHHHHHHTCSE-----EEEESCHHHHHH
T ss_pred eeccCccCCcCCHHHHHHHHHHHH-HcCCCCCccccccCCcHHHHHH----HHHHHHHhCCCe-----EEEecchHHHHH
Confidence 3455653 7999999987764 454444444444443 222333 456889999876 477899999999
Q ss_pred HHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC
Q 015647 232 AVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311 (403)
Q Consensus 232 aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~ 311 (403)
.++.+++++||+|++....|++.. ..+...+ .++++++ .+|+++|++++.+.++++|++...+
T Consensus 134 ~~l~~~~~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~~~------~~d~~~le~~l~~~~~~~vi~~~~~ 196 (409)
T 3kki_A 134 GLLQTICQPNTNVYIDFFAHMSLW---------EGARYAN--AQAHPFM------HNNCDHLRMLIQRHGPGIIVVDSIY 196 (409)
T ss_dssp HHHHHHCCTTCEEEEETTSCHHHH---------HHHHHTT--CEEEEEC------TTCHHHHHHHHHHHCSCEEEEESBC
T ss_pred HHHHHhcCCCCEEEECCCcCHHHH---------HHHHHcC--CeEEEec------CCCHHHHHHHHHhcCCeEEEECCCC
Confidence 999999999999999887764432 1233334 3444443 2789999999987668988887544
Q ss_pred --CCccccHHHHHHHHHHcCCEEEEecccccccccc-cc--c-cCCC-CcccEEEEcCcCCCcCCceEEEEEeCC
Q 015647 312 --YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-KE--L-ASPF-DYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 312 --~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g~--~-~~p~-~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
.|.+.|+++|.++|+++|++|++|++|+.|.... +. . ...+ ..+|+++.|++|++.++ ||+++++++
T Consensus 197 nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~ 270 (409)
T 3kki_A 197 STLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR-AGAIWCNNE 270 (409)
T ss_dssp TTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS-CEEEEESSS
T ss_pred CCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC-ceEEEECHH
Confidence 4788999999999999999999999998876531 11 0 0111 24799999999998665 899888775
No 75
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.71 E-value=6.1e-17 Score=166.18 Aligned_cols=199 Identities=16% Similarity=0.143 Sum_probs=140.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCChHHHHHHHHhhhcc---
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD-SDNWGVNVQPYSCTSANFAVYTGLLL--- 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~-~~~~~v~V~~~SGT~An~aal~all~--- 239 (403)
++.+.+++...+.. +...++.. +...+...++|+.+++++++++|++ ... ..+++++||+||.+++.++++
T Consensus 77 ~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~l~~~~~~~la~~~g~~~~~~--~~~~~~ggt~a~~~a~~a~~~~~~ 151 (497)
T 3mc6_A 77 GDDLIHLQTIAYEK-YCVANQLH--PDVFPAVRKMESEVVSMVLRMFNAPSDTG--CGTTTSGGTESLLLACLSAKMYAL 151 (497)
T ss_dssp CHHHHHHHHHHHHH-TSSCBTTC--TTTCHHHHHHHHHHHHHHHHHTTCCTTTC--CEEEESSHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH-HhhcCCCC--cccChHHHHHHHHHHHHHHHHhCCCCCCC--eEEEcCcHHHHHHHHHHHHHHHHH
Confidence 46777777665543 32222222 2334556678888899999999998 222 246677899999999998865
Q ss_pred --CC---CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--C
Q 015647 240 --PG---DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--Y 312 (403)
Q Consensus 240 --pG---D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~ 312 (403)
+| |+|++....|.+.. +.+...|. +++.++++++++.+|+++|++++.+ ++++|++...+ +
T Consensus 152 ~~~g~~~~~Vi~~~~~h~~~~---------~~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~npt 219 (497)
T 3mc6_A 152 HHRGITEPEIIAPVTAHAGFD---------KAAYYFGM--KLRHVELDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPH 219 (497)
T ss_dssp HHSCCSSCEEEEETTSCHHHH---------HHHHHSCC--EEEEECBCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTT
T ss_pred hcCCCCCceEEEeCCccHHHH---------HHHHHcCC--eEEEEecCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCC
Confidence 56 89999886654322 23344454 4566666644688999999999975 57888776543 6
Q ss_pred CccccHHHHHHHHHHcCCEEEEeccccccccc----cc--cc-cCCC--CcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 313 PREWDYGRFRQIADKCGAVLMCDMAHISGLIA----AK--EL-ASPF--DYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 313 g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia----~g--~~-~~p~--~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
|.+.|+++|++||+++|++|++|++|+.+..+ .+ .. +..+ ..+|++++++||++.||.| |+++++++
T Consensus 220 G~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~ 296 (497)
T 3mc6_A 220 GIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNS 296 (497)
T ss_dssp CCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSH
T ss_pred CcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCH
Confidence 78899999999999999999999999866543 11 11 1111 2489999999999877766 88888764
No 76
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.71 E-value=1.6e-16 Score=162.97 Aligned_cols=196 Identities=12% Similarity=0.085 Sum_probs=134.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCC-------cceEEeCChHHHHHHHHhh
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNW-------GVNVQPYSCTSANFAVYTG 236 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~-------~v~V~~~SGT~An~aal~a 236 (403)
+..+.+++...+ +.+ ...|...+...++|+.+++++++++|++.. | +..+++++||+||+.++.+
T Consensus 87 ~~~~~~~~~~~~-n~~------~~~~~~~~~~~~le~~~~~~la~l~g~~~~-~~~~~~~~~~~v~t~ggTeA~~~al~~ 158 (486)
T 1js3_A 87 PAMLADMLCGAI-GCI------GFSWAASPACTELETVMMDWLGKMLQLPEA-FLAGEAGEGGGVIQGSASEATLVALLA 158 (486)
T ss_dssp HHHHHHHHHHHH-CCC------CSSGGGCHHHHHHHHHHHHHHHHHTTCCGG-GCCTTTCSCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CcC------ccccccChhHHHHHHHHHHHHHHHhCCCch-hcccCCCCCCeEEcCCcHHHHHHHHHH
Confidence 344666666554 222 222334566788998899999999999852 1 1246677899999999877
Q ss_pred hccC---------CC--------e--EEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHh
Q 015647 237 LLLP---------GD--------R--IMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKA 297 (403)
Q Consensus 237 ll~p---------GD--------~--VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i 297 (403)
+..+ || + |+++...|.+.. +.+...|. +++.++++ +++.+|+++|++++
T Consensus 159 ~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~---------~~~~~~G~--~v~~v~~d-~~~~~d~~~L~~~i 226 (486)
T 1js3_A 159 ARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVE---------RAGLIGGV--KLKAIPSD-GKFAMRASALQEAL 226 (486)
T ss_dssp HHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHH---------HHHHHHTC--EEEEECCC-TTSCCCHHHHHHHH
T ss_pred HHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHH---------HHHHhCCC--ceEEeecC-CCCCCCHHHHHHHH
Confidence 6321 43 4 667776643221 23444554 45666666 47899999999999
Q ss_pred ccCC-----CcEEEEe-C-CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccC---CCCcccEEEEcCcCCCc
Q 015647 298 MDYR-----PKILICG-G-SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS---PFDYCDIVTSTTHKSLR 367 (403)
Q Consensus 298 ~~~~-----pklViv~-~-s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~---p~~~aDivt~StHKtL~ 367 (403)
.+.. |.+|++. + +.+|.+.|+++|+++|+++|+++|+|+||+.|.+..+.... .+..+|++++++||++.
T Consensus 227 ~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~ 306 (486)
T 1js3_A 227 ERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLL 306 (486)
T ss_dssp HHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSS
T ss_pred HHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcC
Confidence 7532 2355554 3 34688899999999999999999999999988754322211 12358999999999998
Q ss_pred CCce-EEEEEeCC
Q 015647 368 GPRG-GIIFFRRG 379 (403)
Q Consensus 368 GP~G-G~I~~~~~ 379 (403)
+|.| |++++++.
T Consensus 307 ~p~~~G~l~~~~~ 319 (486)
T 1js3_A 307 VNFDCSAMWVKRR 319 (486)
T ss_dssp CCSSCEEEEESCH
T ss_pred CCcceEEEEEeCH
Confidence 8865 88888765
No 77
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.70 E-value=8.9e-17 Score=164.35 Aligned_cols=168 Identities=19% Similarity=0.124 Sum_probs=123.2
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015647 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
++.+.|+ +++..+++|+ ++++++|.+. .+.++||++|+.+++.+++++||+|++....|++.....
T Consensus 73 ~~~y~r~--~~p~~~~le~----~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~--- 138 (430)
T 3ri6_A 73 GHVYSRS--SNPTVEDLEQ----RLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLF--- 138 (430)
T ss_dssp ---------CCHHHHHHHH----HHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH---
T ss_pred CccccCC--CCHHHHHHHH----HHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH---
Confidence 3444444 5666777765 5899999875 477889999999999999999999999998876653210
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEecccc
Q 015647 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
...+...| .+++.++.+ |+++|++++++ ++++|++...+ .|.+.|+++|+++|+++|++|++|++|+
T Consensus 139 --~~~~~~~G--~~~~~v~~~------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~ 207 (430)
T 3ri6_A 139 --QKTLPSFG--IEVRFVDVM------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMT 207 (430)
T ss_dssp --HTHHHHTT--CEEEEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTS
T ss_pred --HHHHHHcC--CEEEEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 00112223 455555432 89999999875 68888887543 4678999999999999999999999998
Q ss_pred ccccccccccCCCC-cccEEEEcCcCCCcCC---ceEEEEEeCC
Q 015647 340 SGLIAAKELASPFD-YCDIVTSTTHKSLRGP---RGGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~~~p~~-~aDivt~StHKtL~GP---~GG~I~~~~~ 379 (403)
.|.. ..+.. .+|+++.|++|+|.|| .||+++.+..
T Consensus 208 ~~~~-----~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~ 246 (430)
T 3ri6_A 208 PPYL-----LEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGL 246 (430)
T ss_dssp CTTT-----CCGGGGTCSEEEEECCCEEETTEEECCEEEEECSC
T ss_pred cccc-----CChHHcCCEEEEECCcccccCCCCceEEEEEECCh
Confidence 8754 23444 3899999999999887 6798887654
No 78
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.70 E-value=2.7e-16 Score=159.60 Aligned_cols=194 Identities=19% Similarity=0.214 Sum_probs=136.5
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
..+..+.+|..+...++.. .+.+.. .++.+.|| +++..+++|+ ++++++|.+. .++++||++|+.++
T Consensus 46 ~pi~~s~t~~~~~~~~~~~-~~~~~~-~~~~y~r~--~~p~~~~l~~----~la~~~g~~~-----~~~~~sG~~Ai~~a 112 (414)
T 3ndn_A 46 EAMYLTSGYVYGSAAVAEK-SFAGEL-DHYVYSRY--GNPTVSVFEE----RLRLIEGAPA-----AFATASGMAAVFTS 112 (414)
T ss_dssp CCBCCCSBBCCSSHHHHHH-HHTTSS-CCCCBTTT--CCHHHHHHHH----HHHHHHTCSE-----EEEESSHHHHHHHH
T ss_pred CCcccCCceecCChHHHHH-HHhCCc-CCcCcCCC--CChHHHHHHH----HHHHHHCCCc-----EEEECCHHHHHHHH
Confidence 4566677777555444332 222221 23444444 5666666664 5889999864 47788999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--
Q 015647 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-- 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-- 311 (403)
+.+++++||+|++....|++..... . ..+...| .++++++.+ |+++|++++++ ++++|++...+
T Consensus 113 l~~l~~~Gd~Vi~~~~~y~~~~~~~--~---~~~~~~g--~~~~~v~~~------d~~~l~~ai~~-~t~~v~le~p~Np 178 (414)
T 3ndn_A 113 LGALLGAGDRLVAARSLFGSCFVVC--S---EILPRWG--VQTVFVDGD------DLSQWERALSV-PTQAVFFETPSNP 178 (414)
T ss_dssp HHTTCCTTCEEEEESCCCHHHHHHH--H---THHHHTT--CEEEEECTT------CHHHHHHHTSS-CCSEEEEESSCTT
T ss_pred HHHHhCCCCEEEEcCCccchHHHHH--H---HHHHHcC--cEEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCC
Confidence 9999999999999998876643100 0 0011123 455555432 89999999975 68998887544
Q ss_pred CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcC---CceEEEEEeCC
Q 015647 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRG---PRGGIIFFRRG 379 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~G---P~GG~I~~~~~ 379 (403)
+|.+.|+++|+++|+++|++|++|++|+.|... .++. .+|+++.|++|+|.| ++||+++++++
T Consensus 179 tG~~~~l~~i~~la~~~g~~livDe~~~~~~~~-----~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~ 245 (414)
T 3ndn_A 179 MQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQ-----QGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDRE 245 (414)
T ss_dssp TCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHC-----CCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred CCccccHHHHHHHHHHcCCEEEEECCCcccccC-----CchhcCCCeEeccCCccccCCCCceEEEEEECHH
Confidence 467899999999999999999999999977532 3444 389999999999976 34799988764
No 79
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.69 E-value=6.3e-16 Score=156.26 Aligned_cols=187 Identities=18% Similarity=0.219 Sum_probs=136.6
Q ss_pred cCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-
Q 015647 159 SENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL- 237 (403)
Q Consensus 159 Sen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al- 237 (403)
+.+.+++++++++...+...+ |+.+ ....+ +++++++++|++. .|+++|||+|+.+++.++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~~~--------~~~~-~~~~~----l~~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLDGW--------LTTG-RFNDA----FEKKLGEYLGVPY-----VLTTTSGSSANLLALTALT 98 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHCC--------CBSC-HHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCC--------cCCC-hHHHH----HHHHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhh
Confidence 566678899999987765321 2223 22333 4567999999874 477889999999999988
Q ss_pred --------ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015647 238 --------LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 238 --------l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+++||+|+++...|.+.. ..+...| ++++.++++++++.+|+++|++++.+ ++++|++..
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 166 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTV---------NPTIQNG--LIPVFVDVDIPTYNVNASLIEAAVSD-KTKAIMIAH 166 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHH---------HHHHHTT--CEEEECCEETTTTEECGGGHHHHCCT-TEEEEEEEC
T ss_pred hcccccccCCCcCEEEECCCCcHHHH---------HHHHHcC--CEEEEEeccCccCCcCHHHHHHhcCC-CCeEEEEeC
Confidence 889999999998765543 1223334 45666777654678999999999864 578887753
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcC--cCCCcCCceEEEEEeCC
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTT--HKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~St--HKtL~GP~GG~I~~~~~ 379 (403)
+.|.+.|+++|.++|+++|++|++|++|+.|....+. .+. .+|++++|+ .|.|.|++||++++++.
T Consensus 167 -~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~ 235 (437)
T 3bb8_A 167 -TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGK---MAGTFGDIGTVSFYPAKHITMGEGGAVFTQSA 235 (437)
T ss_dssp -GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECSTTSSSCCSSCEEEEESCH
T ss_pred -CCCChhcHHHHHHHHHHcCCEEEEECccccCceECCe---ecccccCEEEEECcCCcCCCCCCeEEEEeCCH
Confidence 4556689999999999999999999999998765221 122 378877764 23378888999998754
No 80
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.68 E-value=4.2e-16 Score=156.32 Aligned_cols=160 Identities=18% Similarity=0.195 Sum_probs=119.7
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015647 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++..+++ ++++++++|.+. .++++|||+|+.+++.+++++||+|++....|++..... . .....
T Consensus 64 ~~~~~~~l----~~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~--~---~~~~~- 128 (392)
T 3qhx_A 64 GNPTRTAL----EAALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLI--D---KVFTG- 128 (392)
T ss_dssp CCHHHHHH----HHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH--H---HTGGG-
T ss_pred CChHHHHH----HHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHH--H---HHHHh-
Confidence 34555444 456999999874 477889999999999999999999999998886643110 0 00111
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015647 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
.++++.+++++ |+++|++++++ ++++|++...+ .|.+.|+++|+++|+++|++|++|++|+.+..
T Consensus 129 -~g~~~~~v~~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~----- 195 (392)
T 3qhx_A 129 -WNVEYTPVALA------DLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL----- 195 (392)
T ss_dssp -GTCEEEEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT-----
T ss_pred -cCcEEEEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 23455655542 89999999875 67888876543 46789999999999999999999999987632
Q ss_pred cCCCC-cccEEEEcCcCCCcCC---ceEEEEEeC
Q 015647 349 ASPFD-YCDIVTSTTHKSLRGP---RGGIIFFRR 378 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP---~GG~I~~~~ 378 (403)
..++. .+|+++.|+||+++|+ ++|+++.++
T Consensus 196 ~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~ 229 (392)
T 3qhx_A 196 QQPLSLGADVVLHSTTKYIGGHSDVVGGALVTND 229 (392)
T ss_dssp CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESC
T ss_pred CChHHhCCcEEEEcCccccCCCCCceEEEEEECc
Confidence 23444 3899999999999765 479888875
No 81
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.68 E-value=9e-16 Score=158.65 Aligned_cols=174 Identities=13% Similarity=0.041 Sum_probs=128.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCC--CCCcceEEeCChHHHHHHHHhhhccCC--------CeEEecCCCCCccccccccC
Q 015647 192 NQYIDQIENLCFERALKAFDLDS--DNWGVNVQPYSCTSANFAVYTGLLLPG--------DRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 192 ~~~~~~lE~~arerla~lfg~~~--~~~~v~V~~~SGT~An~aal~all~pG--------D~VL~~~~ehgghlsh~~~~ 261 (403)
.+...++|+..++++++++|++. +.. ..+++++||+||.+++.++.++| |+|++....|.+..
T Consensus 134 ~p~~~~le~~l~~~la~~~g~~~~~~~v-~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~------ 206 (514)
T 3mad_A 134 WPSTAKFEAEVVAMTAHMLGGDAAGGTV-CGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFD------ 206 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHTTGGGGTSCC-EEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH------
T ss_pred ChHHHHHHHHHHHHHHHHcCCCCccCCc-ceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHH------
Confidence 44556788778889999999872 110 12567789999999999998776 99999987765432
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEecccc
Q 015647 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
+.+...|. +++.+++++ ++.+|+++|++++.+ ++++|++...+ +|.+.|+++|.++|+++|++||+|++|+
T Consensus 207 ---~~~~~~G~--~v~~v~~~~-~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~ 279 (514)
T 3mad_A 207 ---KAAQYFGI--KLVRTPLDA-DYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLG 279 (514)
T ss_dssp ---HHHHHHTC--EEEEECBCT-TSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred ---HHHHHcCC--eeEEeeeCC-CCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccc
Confidence 22344443 456666665 688999999999975 67888776544 5788999999999999999999999998
Q ss_pred ccccc----cccccCCC----CcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 340 SGLIA----AKELASPF----DYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 340 ~Glia----~g~~~~p~----~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+..+ .+....++ ..+|++++++||++.||.| |+++++++
T Consensus 280 ~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~ 328 (514)
T 3mad_A 280 GFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRP 328 (514)
T ss_dssp TTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSH
T ss_pred cccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCH
Confidence 76542 11100112 2489999999999777765 88888764
No 82
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.68 E-value=3.7e-17 Score=166.45 Aligned_cols=165 Identities=11% Similarity=0.072 Sum_probs=116.6
Q ss_pred HHHHHHHHcCCCCCCCcceEEe-CChHHHHHHHHhhhccCCCe---EEecCCCCCccccccccCCccchhhhcccceE--
Q 015647 202 CFERALKAFDLDSDNWGVNVQP-YSCTSANFAVYTGLLLPGDR---IMGLDSPSGGHLSHGYHTPGGKKVSAASIFFE-- 275 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~-~SGT~An~aal~all~pGD~---VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~-- 275 (403)
+++++++++|++++ .|++ .++|+++++++.+++++||+ |++....|.+... .+ ...+...|..+.
T Consensus 116 l~~~la~~~g~~~~----~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~-~~----~~~~~~~G~~~~~~ 186 (465)
T 3e9k_A 116 IVGLMKDIVGANEK----EIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHY-AI----ESQLQLHGLNIEES 186 (465)
T ss_dssp HHGGGHHHHTCCGG----GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHH-HH----HHHHHHTTCCHHHH
T ss_pred HHHHHHHHcCCCcC----CEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHH-HH----HHHHHHcCCcceee
Confidence 57789999999864 3544 46788999999999877665 9999988755321 00 011222332211
Q ss_pred -EeeeecCCCCCCCCHHHHHHHhcc--CCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccC
Q 015647 276 -SFPYKVNPQTGYIDYEKLEEKAMD--YRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS 350 (403)
Q Consensus 276 -vv~~~vd~~~g~ID~d~Le~~i~~--~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~ 350 (403)
+...+.+ +++.+|+++|++++++ .++++|++...+ +|.+.|+++|.++|+++|+++++|++|+.|.++.+...
T Consensus 187 ~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~- 264 (465)
T 3e9k_A 187 MRMIKPRE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHD- 264 (465)
T ss_dssp EEEECCCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH-
T ss_pred eEEEecCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhh-
Confidence 1122333 3578999999999974 257888776543 47889999999999999999999999999876422110
Q ss_pred CCCcccEEEEcCcCCCc-CCce-EEEEEeCC
Q 015647 351 PFDYCDIVTSTTHKSLR-GPRG-GIIFFRRG 379 (403)
Q Consensus 351 p~~~aDivt~StHKtL~-GP~G-G~I~~~~~ 379 (403)
.++|++++|+||+|. ||.| |+++.+++
T Consensus 265 --~~~D~~~~s~~K~l~~gp~~~g~l~~~~~ 293 (465)
T 3e9k_A 265 --WGVDFACWCSYKYLNAGAGGIAGAFIHEK 293 (465)
T ss_dssp --HTCCEEEECSSSTTCCCTTCCCEEEECGG
T ss_pred --cCCCEEEECcccccccCCCceEEEEEcHH
Confidence 048999999999994 8887 88887664
No 83
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.67 E-value=8.8e-16 Score=153.47 Aligned_cols=193 Identities=19% Similarity=0.171 Sum_probs=132.7
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
..+..+.+|..+..-+ +...+... ..++...|+ +++...+++ +++++++|.+. .++++||++|+.++
T Consensus 24 ~pi~~~~~~~~~~~~~-~~~~~~~~-~~~~~y~~~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~ 90 (389)
T 3acz_A 24 YPIFQTSTFCFDSTQQ-GADLFMGK-GEGHIYSRL--GNPTVEQFE----EMVCSIEGAAG-----SAAFGSGMGAISSS 90 (389)
T ss_dssp CCBCCCSBBCCSSHHH-HHHHHTTC-SSCCCBTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHH
T ss_pred CCcccCCceecCChHH-HHHhhcCC-CCCcccCCC--CChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHH
Confidence 3455566665333221 12222221 123444444 455555554 46899999874 47788999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--
Q 015647 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-- 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-- 311 (403)
+.+++++||+|++....|++..... ...+...| ++++.++. .|++++++++++ ++++|++...+
T Consensus 91 ~~~~~~~gd~vl~~~~~y~~~~~~~-----~~~~~~~g--~~~~~v~~------~d~~~l~~~i~~-~~~~v~~~~~~np 156 (389)
T 3acz_A 91 TLAFLQKGDHLIAGDTLYGCTVSLF-----THWLPRFG--IEVDLIDT------SDVEKVKAAWKP-NTKMVYLESPANP 156 (389)
T ss_dssp HTTTCCTTCEEEEESSCCHHHHHHH-----HHHHHHTT--CEEEEECT------TCHHHHHHTCCT-TEEEEEEESSCTT
T ss_pred HHHHhCCCCEEEEeCCCchHHHHHH-----HHHHHHcC--CEEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCC
Confidence 9999999999999998876643100 00012223 44555443 589999999875 67888876544
Q ss_pred CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeC
Q 015647 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
.|.+.|+++|.++|+++|+++++|++|+.+... .|++ .+|+++.|+||+|+||. ||++++++
T Consensus 157 tG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~-----~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~ 222 (389)
T 3acz_A 157 TCKVSDIKGIAVVCHERGARLVVDATFTSPCFL-----KPLELGADIALHSVSKYINGHGDVIGGVSSAKT 222 (389)
T ss_dssp TCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-----CGGGTTCSEEEEETTTTTTCSSCCCCEEEEESS
T ss_pred CCeecCHHHHHHHHHHcCCEEEEECCCcccccc-----CccccCCeEEEECChhhccCCCCceeEEEEECc
Confidence 467899999999999999999999999887531 2333 48999999999998885 48888876
No 84
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.67 E-value=1.3e-15 Score=153.04 Aligned_cols=189 Identities=16% Similarity=0.186 Sum_probs=135.6
Q ss_pred eeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015647 156 LIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 156 LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
|-.+++.. ++.+++++...+...+ |....+...+ .++.+++++|.+. .++++|||+|+.++
T Consensus 21 l~~~~p~~~~p~~~~~a~~~~~~~~~--------y~~~~~~~~~----l~~~la~~~~~~~-----v~~~~ggt~al~~~ 83 (424)
T 2po3_A 21 LLVGRPNRIDRARLYERLDRALDSQW--------LSNGGPLVRE----FEERVAGLAGVRH-----AVATCNATAGLQLL 83 (424)
T ss_dssp EETTCCCCCCHHHHHHHHHHHHHHTC--------CSSSCHHHHH----HHHHHHHHHTSSE-----EEEESCHHHHHHHH
T ss_pred ccccCCCCCChHHHHHHHHHHHhcCC--------cccCCHHHHH----HHHHHHHHhCCCe-----EEEeCCHHHHHHHH
Confidence 33344443 4588888877664321 1110233333 4557899999864 36677899999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCC
Q 015647 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYP 313 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g 313 (403)
+.++. +||+|++....|.+.. ..+...| .+++.++++++++.+|+++|++++++ ++++|++.. .+|
T Consensus 84 l~~l~-~gd~Vlv~~~~~~~~~---------~~~~~~G--~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~tG 149 (424)
T 2po3_A 84 AHAAG-LTGEVIMPSMTFAATP---------HALRWIG--LTPVFADIDPDTGNLDPDQVAAAVTP-RTSAVVGVH-LWG 149 (424)
T ss_dssp HHHHT-CCSEEEEESSSCTHHH---------HHHHHTT--CEEEEECBCTTTSSBCHHHHGGGCCT-TEEEEEEEC-GGG
T ss_pred HHHcC-CCCEEEECCCccHHHH---------HHHHHcC--CEEEEEecCCCcCCcCHHHHHHhhCc-CCcEEEEEC-CCC
Confidence 99875 7999999998775543 1233334 45667777765678999999998864 678887653 567
Q ss_pred ccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCc--CCCcCCceEEEEEeC
Q 015647 314 REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTH--KSLRGPRGGIIFFRR 378 (403)
Q Consensus 314 ~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StH--KtL~GP~GG~I~~~~ 378 (403)
...|+++|.++|+++|+++++|++|+.|+...+. ++. ..|++++|+| |+|.|++||++++++
T Consensus 150 ~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~ 214 (424)
T 2po3_A 150 RPCAADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLGDAEVFSFHATKAVNAFEGGAVVTDD 214 (424)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCCSSCEEEEESC
T ss_pred CcCCHHHHHHHHHHcCCEEEEECccccCCeECCe---ecccccCEEEEeCCCCCCccCCCCeEEEeCC
Confidence 7899999999999999999999999988754321 222 3688888887 999888889999874
No 85
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.67 E-value=7.8e-16 Score=153.54 Aligned_cols=192 Identities=19% Similarity=0.190 Sum_probs=132.8
Q ss_pred eeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh
Q 015647 156 LIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT 235 (403)
Q Consensus 156 LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~ 235 (403)
.+++++++.+++.+++. .+.+.. .++...++ ..+...+ .++++++++|.+. .++++||++|+.+++.
T Consensus 31 d~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~--~~~~~~~----l~~~la~~~g~~~-----~i~~~sG~~a~~~~l~ 97 (398)
T 2rfv_A 31 IFQTSTFVFDSAEQGAA-RFALEE-SGYIYTRL--GNPTTDA----LEKKLAVLERGEA-----GLATASGISAITTTLL 97 (398)
T ss_dssp CCCCSBCCCSSHHHHHH-HC------CCSBTTT--CCHHHHH----HHHHHHHHHTCSE-----EEEESSHHHHHHHHHH
T ss_pred CcCCCccccCCHHHHHH-hhcCCC-CCCceeCC--CChHHHH----HHHHHHHHhCCCc-----EEEECCHHHHHHHHHH
Confidence 35567777777777765 221211 11212222 2344444 4557899999873 5778899999999999
Q ss_pred hhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CC
Q 015647 236 GLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YP 313 (403)
Q Consensus 236 all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g 313 (403)
+++++||+|++....|++..... .......| .+++.+++ .|++++++++++ ++++|++...+ .|
T Consensus 98 ~~~~~gd~vi~~~~~~~~~~~~~-----~~~~~~~g--~~~~~v~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG 163 (398)
T 2rfv_A 98 TLCQQGDHIVSASAIYGCTHAFL-----SHSMPKFG--INVRFVDA------AKPEEIRAAMRP-ETKVVYIETPANPTL 163 (398)
T ss_dssp HHCCTTCEEEEESSSCHHHHHHH-----HTHHHHTT--CEEEEECT------TSHHHHHHHCCT-TEEEEEEESSBTTTT
T ss_pred HHhCCCCEEEEcCCCcccHHHHH-----HHHHHHcC--CEEEEeCC------CCHHHHHHhcCC-CCeEEEEECCCCCCC
Confidence 99999999999998876543100 00002223 44555543 289999999875 67888876543 46
Q ss_pred ccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015647 314 REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 314 ~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.++|+++|.++|+++|+++++|++|+.|... .++. .+|+++.|+||+|.||. ||+++.+++
T Consensus 164 ~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~ 228 (398)
T 2rfv_A 164 SLVDIETVAGIAHQQGALLVVDNTFMSPYCQ-----QPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQE 228 (398)
T ss_dssp BCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred cccCHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhCCcEEEEeCcccccCCCCceEEEEEECHH
Confidence 7899999999999999999999999988653 2233 38999999999998775 488888764
No 86
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.67 E-value=1.1e-15 Score=151.31 Aligned_cols=200 Identities=18% Similarity=0.201 Sum_probs=139.0
Q ss_pred cccceeccCc--c-CcHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015647 152 KGIELIASEN--F-VCRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 152 ~~l~LiaSen--~-~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
..|.|..+++ + .++.+++++...+.. +..++.+.++..|. +..++ .++++++++|.+. .+++++|+
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~-----v~~~~ggt 113 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEK-YGTGCAGSRFLNGTLDIHVE----LEEKLSAYVGKEA-----AILFSTGF 113 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHHHH----HHHHHHHHHTCSE-----EEEESSHH
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHH-cCCCCCCcCcccCCcHHHHH----HHHHHHHHhCCCc-----EEEECCHH
Confidence 3456655543 2 688999998887754 22233333333343 33333 4567889999853 46677899
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC---CCcE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY---RPKI 304 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~---~pkl 304 (403)
+|+.+++.+++++||+|++....|++.. ..+...| .+++.+++ +|+++|++++++. ++++
T Consensus 114 ~a~~~~~~~~~~~gd~V~~~~p~~~~~~---------~~~~~~g--~~~~~v~~------~d~~~l~~~l~~~~~~~~~~ 176 (398)
T 3a2b_A 114 QSNLGPLSCLMGRNDYILLDERDHASII---------DGSRLSF--SKVIKYGH------NNMEDLRAKLSRLPEDSAKL 176 (398)
T ss_dssp HHHHHHHHHSSCTTCEEEEETTCCHHHH---------HHHHHSS--SEEEEECT------TCHHHHHHHHHTSCSSSCEE
T ss_pred HHHHHHHHHHhCCCCEEEECCccCHHHH---------HHHHHcC--CceEEeCC------CCHHHHHHHHHhhccCCceE
Confidence 9999999999999999999988765543 1233344 34455442 6899999999764 6788
Q ss_pred EEEeCCC--CCccccHHHHHHHHHHcCCEEEEecccccccccc-cc-ccC--CCC-cccEEEEcCcCCCcCCceEEEEEe
Q 015647 305 LICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-KE-LAS--PFD-YCDIVTSTTHKSLRGPRGGIIFFR 377 (403)
Q Consensus 305 Viv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g~-~~~--p~~-~aDivt~StHKtL~GP~GG~I~~~ 377 (403)
|++...+ +|...|+++|.++|+++|+++++|++|+.|.... +. ... .+. .+|++++|+||++ ||.||+++++
T Consensus 177 v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~GG~~~~~ 255 (398)
T 3a2b_A 177 ICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSL-ASLGGFVAGD 255 (398)
T ss_dssp EEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTT-CSSCEEEEEC
T ss_pred EEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccc-cCCCcEEEeC
Confidence 8876544 4678899999999999999999999998875421 11 000 111 2699999999987 5778999887
Q ss_pred CC
Q 015647 378 RG 379 (403)
Q Consensus 378 ~~ 379 (403)
++
T Consensus 256 ~~ 257 (398)
T 3a2b_A 256 AD 257 (398)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 87
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.67 E-value=6.5e-16 Score=155.77 Aligned_cols=185 Identities=19% Similarity=0.176 Sum_probs=127.4
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
-.+..+.++..+.+.+... +.+.|| +++...++| +++++++|.+. .|+++||++|+.++
T Consensus 40 ~pi~~stt~~~~~~~~~~~----------~~y~r~--~~p~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~ 98 (403)
T 3cog_A 40 PPISLSTTFKQGAPGQHSG----------FEYSRS--GNPTRNCLE----KAVAALDGAKY-----CLAFASGLAATVTI 98 (403)
T ss_dssp CCBCCCSCBCCC--------------------------CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred CCeeccceeecCCccccCC----------CcccCC--CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHH
Confidence 4456677777766644322 112232 345555554 46899999874 58889999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--
Q 015647 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-- 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-- 311 (403)
+. ++++||+|++....|+++.... . ..+...| ++++.++++ |+++|++++++ ++++|++...+
T Consensus 99 ~~-l~~~gd~Vl~~~~~y~~~~~~~--~---~~~~~~G--~~v~~v~~~------d~~~l~~~i~~-~t~~v~~~~p~np 163 (403)
T 3cog_A 99 TH-LLKAGDQIICMDDVYGGTNRYF--R---QVASEFG--LKISFVDCS------KIKLLEAAITP-ETKLVWIETPTNP 163 (403)
T ss_dssp HT-TSCTTCEEEEESSCCHHHHHHH--H---HTGGGGT--CEEEEECTT------SHHHHHHHCCT-TEEEEEEESSCTT
T ss_pred HH-HhCCCCEEEEeCCCcchHHHHH--H---HHHHHcC--CEEEEECCC------CHHHHHHhcCc-CCeEEEEECCCCC
Confidence 99 8999999999998887643110 0 0012223 455655542 89999999874 67888876544
Q ss_pred CCccccHHHHHHHHHHcC-CEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015647 312 YPREWDYGRFRQIADKCG-AVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~G-a~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
+|.+.|+++|.++|+++| +++++|++|+.+... .|++ .+|+++.|+||+|+||. +|+++++++
T Consensus 164 tG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~-----~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~ 231 (403)
T 3cog_A 164 TQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQ-----RPLALGADISMYSATKYMNGHSDVVMGLVSVNCE 231 (403)
T ss_dssp TCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTC-----CTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCH
T ss_pred CCeeeCHHHHHHHHHHcCCCEEEEECCCcccccC-----CccccCCeEEEEcChhhccCCCCCeEEEEEECcH
Confidence 467899999999999999 999999999887532 3444 48999999999999886 499988643
No 88
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.66 E-value=9.8e-16 Score=148.12 Aligned_cols=191 Identities=12% Similarity=0.096 Sum_probs=132.2
Q ss_pred ccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccC
Q 015647 161 NFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLP 240 (403)
Q Consensus 161 n~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~p 240 (403)
...++.|++++...+. .|..+. |. ..+.+.+++++++++|++++ -.++++|||+|+.+++.+++++
T Consensus 24 ~~~~~~v~~a~~~~~~-~~~~~~-------g~---~~~~~~~~~~l~~~~g~~~~---~v~~~~g~t~a~~~~~~~~~~~ 89 (359)
T 1svv_A 24 VGMHPKILDLMARDNM-TQHAGY-------GQ---DSHCAKAARLIGELLERPDA---DVHFISGGTQTNLIACSLALRP 89 (359)
T ss_dssp SCCCHHHHHHHHHHTT-CCCCST-------TC---SHHHHHHHHHHHHHHTCTTS---EEEEESCHHHHHHHHHHHHCCT
T ss_pred CCCCHHHHHHHHHHHh-hccccc-------cc---cHHHHHHHHHHHHHhCCCCc---cEEEeCCchHHHHHHHHHHhCC
Confidence 3568999999987764 232111 11 12333456679999998764 2344568999999999999999
Q ss_pred CCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC------CCcEEEEeCC-CCC
Q 015647 241 GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY------RPKILICGGS-SYP 313 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~------~pklViv~~s-~~g 313 (403)
||+|++....|.++... ..+...| .+++.++.+ ++.+|+++|++++++. ++++|++... .+|
T Consensus 90 gd~vl~~~~~~~~~~~~-------~~~~~~g--~~~~~v~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG 158 (359)
T 1svv_A 90 WEAVIATQLGHISTHET-------GAIEATG--HKVVTAPCP--DGKLRVADIESALHENRSEHMVIPKLVYISNTTEVG 158 (359)
T ss_dssp TEEEEEETTSHHHHSST-------THHHHTT--CCEEEECCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTS
T ss_pred CCEEEEcccchHHHHHH-------HHHhcCC--CeeEEEeCC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCc
Confidence 99999998776554310 0123334 345555554 5789999999999764 2788877644 346
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeccc---cccccccccccCCC---CcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 314 REWD---YGRFRQIADKCGAVLMCDMAH---ISGLIAAKELASPF---DYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 314 ~~~D---i~~I~~Iake~Ga~LivDaAh---~~Glia~g~~~~p~---~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
...+ +++|.++|+++|+++++|++| +.|..+.. ...+ ..+|++++++||+ +||.| |+++.+++
T Consensus 159 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~~ 231 (359)
T 1svv_A 159 TQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVND--LTLADIARLTDMFYIGATKA-GGMFGEALIILNDA 231 (359)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCC--CCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSGG
T ss_pred eecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcc--hhhhhhhhcCCEEEEecccC-CCCCceEEEEEccc
Confidence 7777 899999999999999999999 54543211 1111 1379999999996 67877 88887654
No 89
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.66 E-value=1.4e-15 Score=153.12 Aligned_cols=192 Identities=17% Similarity=0.187 Sum_probs=133.0
Q ss_pred eeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh
Q 015647 156 LIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT 235 (403)
Q Consensus 156 LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~ 235 (403)
.+.+++++.+++.+++.. +.+.. .++.+.+ .|.+..++++ +++++++|.+. .++++||++|+.+++.
T Consensus 29 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~Y~~--~~~~~~~~l~----~~ia~~~g~~~-----~i~~~~g~~ai~~~~~ 95 (404)
T 1e5e_A 29 IYQTSTFVFDNCQQGGNR-FAGQE-SGYIYTR--LGNPTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAATVL 95 (404)
T ss_dssp CCCCSBCCCSSHHHHHHH-HTTSS-CSCCBTT--TCCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHH
T ss_pred CcCCCccccCCHHHHHHh-hcCCc-CCccccC--CcChHHHHHH----HHHHHHhCCCc-----EEEeCChHHHHHHHHH
Confidence 345566666666665531 22211 1121222 2555555554 46889999864 4778899999999999
Q ss_pred hhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CC
Q 015647 236 GLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YP 313 (403)
Q Consensus 236 all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g 313 (403)
+++++||+|++....|++..... ...+...| .+++.++++ |+++|++++++ ++|+|++...+ +|
T Consensus 96 ~l~~~gd~Vl~~~~~y~~~~~~~-----~~~~~~~g--~~~~~v~~~------d~~~l~~~i~~-~t~~v~l~~p~NptG 161 (404)
T 1e5e_A 96 TILKAGDHLISDECLYGCTHALF-----EHALTKFG--IQVDFINTA------IPGEVKKHMKP-NTKIVYFETPANPTL 161 (404)
T ss_dssp HHCCTTCEEEEESCCCHHHHHHH-----HTHHHHTT--CEEEEECTT------STTHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred HHhCCCCEEEEeCCCchhHHHHH-----HHHHHHcC--CEEEEECCC------CHHHHHHhcCC-CCcEEEEECCCCCCC
Confidence 99999999999998876543100 00122233 455555542 78999999874 68888876543 46
Q ss_pred ccccHHHHHHHHHH-cCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015647 314 REWDYGRFRQIADK-CGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 314 ~~~Di~~I~~Iake-~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.++|+++|.++|++ +|+++++|++|+.+... .|+. .+|+++.|+||+|+||. ||+++++++
T Consensus 162 ~v~~l~~i~~la~~~~~~~li~De~~~~~~~~-----~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~ 227 (404)
T 1e5e_A 162 KIIDMERVCKDAHSQEGVLVIADNTFCSPMIT-----NPVDFGVDVVVHSATKYINGHTDVVAGLICGKAD 227 (404)
T ss_dssp CCCCHHHHHHHHHTSTTCEEEEECTTTCTTTC-----CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred cccCHHHHHHHHHhhcCCEEEEECCCchhhhC-----CccccCCEEEEEcCccccCCCCCCeEEEEEECHH
Confidence 78999999999999 99999999999987532 2333 38999999999998875 588888764
No 90
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.65 E-value=5.5e-16 Score=150.26 Aligned_cols=197 Identities=16% Similarity=0.146 Sum_probs=128.3
Q ss_pred ceeccCc-cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015647 155 ELIASEN-FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 155 ~LiaSen-~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
.|-.+++ +.++.+++++...+. + ...|...+...++ ++++++++|.+. .++++|||+|+.++
T Consensus 7 ~~~~~~~~~p~~~~~~a~~~~~~-----~---~~~y~~~~~~~~l----~~~la~~~g~~~-----~~~~~~gt~a~~~~ 69 (347)
T 1jg8_A 7 DLRSDTVTKPTEEMRKAMAQAEV-----G---DDVYGEDPTINEL----ERLAAETFGKEA-----ALFVPSGTMGNQVS 69 (347)
T ss_dssp ECSCGGGCCCCHHHHHHHHTCCC-----C---CGGGTCCHHHHHH----HHHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred EeccccCCCCCHHHHHHHhcCCC-----C---CcccCCChHHHHH----HHHHHHHhCCce-----EEEecCcHHHHHHH
Confidence 3444433 457888888764321 1 1122223333344 457999999875 47788999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-----CCcEEEEe
Q 015647 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-----RPKILICG 308 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-----~pklViv~ 308 (403)
+.++++|||+|++....|.+..... ..+...| .+++++ .+ +++.+|+++|++++++. ++++|++.
T Consensus 70 ~~~~~~~gd~Vl~~~~~~~~~~~~~------~~~~~~g--~~~~~v-~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~ 139 (347)
T 1jg8_A 70 IMAHTQRGDEVILEADSHIFWYEVG------AMAVLSG--VMPHPV-PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAIE 139 (347)
T ss_dssp HHHHCCTTCEEEEETTCHHHHSSTT------HHHHHTC--CEEEEE-CE-ETTEECHHHHHHHSCCSCTTSCCEEEEEEE
T ss_pred HHHhcCCCCEEEEcCcchhhhcccc------chhhccC--eEEEEe-cC-CCCccCHHHHHHHhccccccccCceEEEEe
Confidence 9999999999999887653322100 0122234 344444 33 35678999999998752 57888776
Q ss_pred CCC--C-Ccccc---HHHHHHHHHHcCCEEEEeccccccccc-cccccCCC-CcccEEEEcCcCCCcCCceEEEEEeC
Q 015647 309 GSS--Y-PREWD---YGRFRQIADKCGAVLMCDMAHISGLIA-AKELASPF-DYCDIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 309 ~s~--~-g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia-~g~~~~p~-~~aDivt~StHKtL~GP~GG~I~~~~ 378 (403)
..+ + |...+ +++|.++|+++|++|++|++|..|... .+....++ ..+|.+++++||+|++|.|++++.++
T Consensus 140 ~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 217 (347)
T 1jg8_A 140 NTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR 217 (347)
T ss_dssp SSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH
T ss_pred ccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH
Confidence 444 3 66654 578889999999999999999764321 12111112 14888889999999888777666554
No 91
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.65 E-value=1.6e-15 Score=146.81 Aligned_cols=191 Identities=12% Similarity=0.049 Sum_probs=127.1
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCC
Q 015647 162 FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPG 241 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pG 241 (403)
..+|.|++++...+.. |. ..|...+.. +..++++++++|. .. ..++++|||+|+.+++.+++++|
T Consensus 19 ~~~~~v~~a~~~~~~~-~~------~~~~~~~~~----~~l~~~la~~~g~-~~---~v~~~~~gt~a~~~al~~~~~~g 83 (356)
T 1v72_A 19 GASPEVAQALVKHSSG-QA------GPYGTDELT----AQVKRKFCEIFER-DV---EVFLVPTGTAANALCLSAMTPPW 83 (356)
T ss_dssp CCCHHHHHHHHHTTSS-CC------CSTTCSHHH----HHHHHHHHHHHTS-CC---EEEEESCHHHHHHHHHHTSCCTT
T ss_pred CCCHHHHHHHHhhccC-cc------cccccchHH----HHHHHHHHHHhCC-CC---cEEEeCCccHHHHHHHHHhcCCC
Confidence 3589999998765421 11 112112222 2356678999993 31 13556789999999999999999
Q ss_pred CeEEecCCCCCccccccccCCccchhhhc--ccceEEeeeecCCCCCCCCHHHHHH-HhccC------CCcEEEEeC-CC
Q 015647 242 DRIMGLDSPSGGHLSHGYHTPGGKKVSAA--SIFFESFPYKVNPQTGYIDYEKLEE-KAMDY------RPKILICGG-SS 311 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~~~~~~~~v~~~--g~~~~vv~~~vd~~~g~ID~d~Le~-~i~~~------~pklViv~~-s~ 311 (403)
|+|++....|++....+ .+... |. +++.++++ ++.+|+++|++ ++++. ++++|++.. ++
T Consensus 84 d~vi~~~~~~~~~~~~~-------~~~~~~~g~--~~~~v~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~ 152 (356)
T 1v72_A 84 GNIYCHPASHINNDECG-------APEFFSNGA--KLMTVDGP--AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE 152 (356)
T ss_dssp EEEEECTTSHHHHSSTT-------HHHHHTTSC--EEEECCCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT
T ss_pred CEEEEcCccchhhhhch-------HHHHHhCCc--EEEEecCC--CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC
Confidence 99999886654332110 02333 43 45555554 36799999999 88752 468887764 34
Q ss_pred CCc---cccHHHHHHHHHHcCCEEEEeccccccccc-cccccCCC--C-cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 312 YPR---EWDYGRFRQIADKCGAVLMCDMAHISGLIA-AKELASPF--D-YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 312 ~g~---~~Di~~I~~Iake~Ga~LivDaAh~~Glia-~g~~~~p~--~-~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+|. ..++++|.++|+++|++|++|++|..+... .+..+..+ + .+|++++|+||+ ++|.| |+++.+++
T Consensus 153 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~~ 227 (356)
T 1v72_A 153 VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNTS 227 (356)
T ss_dssp TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSGG
T ss_pred CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECHH
Confidence 676 567899999999999999999999754321 12222222 1 489999999998 67888 67776543
No 92
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.65 E-value=3.3e-16 Score=152.58 Aligned_cols=202 Identities=10% Similarity=0.003 Sum_probs=134.4
Q ss_pred HHhhhcccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC
Q 015647 147 KQRQFKGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY 224 (403)
Q Consensus 147 ~~rq~~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~ 224 (403)
..++...+.+..++|+. +|+|++++...+.. ..|...+...++ ++++++++|.+. .++++
T Consensus 9 ~~~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~---------~~~~~~~~~~~l----~~~la~~~~~~~-----~i~~~ 70 (359)
T 3pj0_A 9 SYQKTPYKLGGNGPRNVGVLTEALQNIDDNLES---------DIYGNGAVIEDF----ETKIAKILGKQS-----AVFFP 70 (359)
T ss_dssp HHHTCSEESSSSSCCBHHHHHHHTTTSCTTCBC---------CBTTBSHHHHHH----HHHHHHHHTCSE-----EEEES
T ss_pred HHHhcchhhcCCCccccCCCHHHHHHHHhhccc---------CcccCCHHHHHH----HHHHHHHhCCCc-----EEEeC
Confidence 35677778889999998 89999988753211 112223334444 456899999876 36678
Q ss_pred ChHHHHHHHHhhhccCCCe--EEecCCCCCccccccccCCccchh-hhcccceEEeeeecCCCCCCCCHHHHHHHhccCC
Q 015647 225 SCTSANFAVYTGLLLPGDR--IMGLDSPSGGHLSHGYHTPGGKKV-SAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR 301 (403)
Q Consensus 225 SGT~An~aal~all~pGD~--VL~~~~ehgghlsh~~~~~~~~~v-~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~ 301 (403)
||++|+.+++.+++++||+ |++....|.... .. ..+ ...| .++++++. +++.+|+++|+++ ..+
T Consensus 71 ~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~------~~-~~~~~~~g--~~~~~v~~--~~~~~d~~~l~~~--~~~ 137 (359)
T 3pj0_A 71 SGTMAQQIALRIWADRKENRRVAYHPLSHLEIH------EQ-DGLKELQQ--ITPLLLGT--ANQLLTIDDIKSL--REP 137 (359)
T ss_dssp CHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHS------ST-THHHHHHC--CEEEECSC--TTSCCCHHHHHTC--SSC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEeccceeeeh------hc-chHHHhcC--ceEEecCC--cCCCcCHHHHHhc--cCC
Confidence 9999999999999999987 555443321110 00 011 2233 34555554 3578999999988 457
Q ss_pred CcEEEEeCCC--C-CccccHHH---HHHHHHHcCCEEEEecccccccccc-ccccCCC-CcccEEEEcCcCCCcCCceEE
Q 015647 302 PKILICGGSS--Y-PREWDYGR---FRQIADKCGAVLMCDMAHISGLIAA-KELASPF-DYCDIVTSTTHKSLRGPRGGI 373 (403)
Q Consensus 302 pklViv~~s~--~-g~~~Di~~---I~~Iake~Ga~LivDaAh~~Glia~-g~~~~p~-~~aDivt~StHKtL~GP~GG~ 373 (403)
+++|++..++ . |...+.++ |.++|+++|++|++|++|..+.... +....++ ..+|+++.|+||+|.||.||+
T Consensus 138 ~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~ 217 (359)
T 3pj0_A 138 VSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAI 217 (359)
T ss_dssp CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEE
T ss_pred ceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEE
Confidence 8998886543 2 56666555 4999999999999999987664321 1111111 247999999999999997777
Q ss_pred EEEeCC
Q 015647 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++.+++
T Consensus 218 ~~~~~~ 223 (359)
T 3pj0_A 218 LAGNDD 223 (359)
T ss_dssp EEECHH
T ss_pred EECCHH
Confidence 776653
No 93
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.65 E-value=3.7e-15 Score=144.82 Aligned_cols=199 Identities=12% Similarity=0.002 Sum_probs=137.1
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHH
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSA 229 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~A 229 (403)
+.|.|..+++. .++.|++++...+...+ +|| .... + ..|+++++++|++++ ..+++++||+|
T Consensus 17 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~-------~~~~---~-~l~~~la~~~~~~~~---~i~~~~g~~~a 80 (354)
T 3ly1_A 17 NPIRINFNENPLGMSPKAQAAARDAVVKAN--RYA-------KNEI---L-MLGNKLAAHHQVEAP---SILLTAGSSEG 80 (354)
T ss_dssp SCEECSSCCCSSCCCHHHHHHHHHTGGGTT--SCC-------HHHH---H-HHHHHHHHHTTSCGG---GEEEESHHHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHhhCc--CCC-------CCch---H-HHHHHHHHHhCCChH---HEEEeCChHHH
Confidence 44677666665 58999999987765321 221 2222 2 356789999998764 13444567899
Q ss_pred HHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc-CCCcEEEEe
Q 015647 230 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD-YRPKILICG 308 (403)
Q Consensus 230 n~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~-~~pklViv~ 308 (403)
+.+++.+++++||+|++....|.+.. ..+...| .+++++++++ ++.+|+++|++++++ .++++|++.
T Consensus 81 ~~~~~~~l~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~~v~l~ 148 (354)
T 3ly1_A 81 IRAAIEAYASLEAQLVIPELTYGDGE---------HFAKIAG--MKVTKVKMLD-NWAFDIEGLKAAVAAYSGPSIVYLV 148 (354)
T ss_dssp HHHHHHHHCCTTCEEEEESSSCTHHH---------HHHHHTT--CEEEEECCCT-TSCCCHHHHHHHHHTCSSCEEEEEE
T ss_pred HHHHHHHHhCCCCeEEECCCCchHHH---------HHHHHcC--CEEEEecCCC-CCCCCHHHHHHHhccCCCCCEEEEe
Confidence 99999999999999999987765432 1223334 4566677764 578999999999975 478988776
Q ss_pred CCC--CCccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCCC------cccEEEEcCcCCCc--CCceEEEEE
Q 015647 309 GSS--YPREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPFD------YCDIVTSTTHKSLR--GPRGGIIFF 376 (403)
Q Consensus 309 ~s~--~g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~~------~aDivt~StHKtL~--GP~GG~I~~ 376 (403)
..+ +|..+|.+++.+|++. +|+++++|++|+.... .+.....+. ..++++.|+||+++ |.+.|+++.
T Consensus 149 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 227 (354)
T 3ly1_A 149 NPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVN-DPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA 227 (354)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCC-CTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC
T ss_pred CCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhcc-ccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec
Confidence 444 4678898888888887 9999999999985432 221111111 24588999999973 445588887
Q ss_pred eCC
Q 015647 377 RRG 379 (403)
Q Consensus 377 ~~~ 379 (403)
+++
T Consensus 228 ~~~ 230 (354)
T 3ly1_A 228 HPT 230 (354)
T ss_dssp CHH
T ss_pred CHH
Confidence 653
No 94
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.65 E-value=2.9e-15 Score=147.01 Aligned_cols=203 Identities=13% Similarity=0.128 Sum_probs=135.1
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCChH
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPYSCT 227 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~SGT 227 (403)
+-|.|..+++. .++.|++++...+.+.. .+++.. ..++++..++.+++.+| ++++ ..+++++||
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~--------~~~l~~~la~~l~~~~g~~~~~~---~i~~~~g~~ 95 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVAA-FGYESV--------PAEYYKAVADWEEIEHRARPKED---WCVFASGVV 95 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTCC-CCCBCC--------CHHHHHHHHHHHHHHHSCCCCGG---GEEEESCHH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcCc-CCCCCC--------CHHHHHHHHHHHHHHhCCCCCHH---HEEECCCHH
Confidence 34666555433 48999999988765421 122111 23455556677888888 4443 234445679
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecC--CCCCCCCHHHHHHHhccCCCcEE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVN--PQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd--~~~g~ID~d~Le~~i~~~~pklV 305 (403)
+|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++ ..+..+|+++|++++++.++++|
T Consensus 96 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v 164 (391)
T 3dzz_A 96 PAISAMVRQFTSPGDQILVQEPVYNMFY---------SVIEGNG--RRVISSDLIYENSKYSVNWADLEEKLATPSVRMM 164 (391)
T ss_dssp HHHHHHHHHHSCTTCEEEECSSCCHHHH---------HHHHHTT--CEEEECCCEEETTEEECCHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHhCCCCCeEEECCCCcHHHH---------HHHHHcC--CEEEEeeeeecCCceeecHHHHHHHHhccCceEE
Confidence 9999999999999999999988765432 1223334 345555553 22234999999999986678888
Q ss_pred EEeCCC--CCcc---ccHHHHHHHHHHcCCEEEEeccccccccccccccCCC---C--ccc--EEEEcCcCCC--cCCce
Q 015647 306 ICGGSS--YPRE---WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---D--YCD--IVTSTTHKSL--RGPRG 371 (403)
Q Consensus 306 iv~~s~--~g~~---~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~--~aD--ivt~StHKtL--~GP~G 371 (403)
++...+ +|.. .++++|.++|+++|++|++|++|+.+... +....++ . ..| +++.|+||++ .|.+.
T Consensus 165 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~ 243 (391)
T 3dzz_A 165 VFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLT-DEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHA 243 (391)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS-SCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCC
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCC-CCCceehhhcCccccCcEEEEEeChhhccccchhh
Confidence 776443 4555 57999999999999999999999765432 2111111 1 256 8999999996 45556
Q ss_pred EEEEEeC
Q 015647 372 GIIFFRR 378 (403)
Q Consensus 372 G~I~~~~ 378 (403)
|++++++
T Consensus 244 G~~~~~~ 250 (391)
T 3dzz_A 244 ACAIIPN 250 (391)
T ss_dssp EEEECCS
T ss_pred eEEEECC
Confidence 9998873
No 95
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.64 E-value=2.3e-16 Score=154.35 Aligned_cols=200 Identities=11% Similarity=0.024 Sum_probs=128.8
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCC---ccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CChH
Q 015647 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGA---RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP-YSCT 227 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgs---r~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~-~SGT 227 (403)
+.+.+.+++..+++.|++++...+.+.+ +..++ ..+.+....+.++ .+++++++++|++.. + -.+++ ++||
T Consensus 4 ~~~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~la~~~g~~~~-~-~~i~~t~g~t 78 (362)
T 2c0r_A 4 RAYNFNAGPAALPLEVLERAQAEFVDYQ--HTGMSIMEMSHRGAVYEAVHN-EAQARLLALLGNPTG-Y-KVLFIQGGAS 78 (362)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSST--TSSSCGGGSCTTSHHHHHHHH-HHHHHHHHHTTCCSS-E-EEEEESSHHH
T ss_pred ceeeccCCCCCCCHHHHHHHHHHHhhhh--hcCccccccCCCcHHHHHHHH-HHHHHHHHHhCCCCC-c-EEEEECCCch
Confidence 3567889999999999999988765422 22221 1112333333444 478899999999752 0 02445 5689
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHhccCCCcEEE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i~~~~pklVi 306 (403)
+|+++++.++++|||+|++....+ ++|.+. ..+...| .+..++++.+. .+..+|.++++ +. .++|+|+
T Consensus 79 ~a~~~~~~~l~~~gd~vl~~~~~~---~~~~~~----~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~-~~t~~v~ 147 (362)
T 2c0r_A 79 TQFAMIPMNFLKEGQTANYVMTGS---WASKAL----KEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ-DNAAYLH 147 (362)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSH---HHHHHH----HHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-TTEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEecCc---HhHHHH----HHHHHhC-CeEEEecccccccccCCCHHHcc--cC-CCcCEEE
Confidence 999999999999999998775432 222110 1122334 34334333111 12236777654 43 3678877
Q ss_pred EeCC--CCCcc-ccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 307 CGGS--SYPRE-WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 307 v~~s--~~g~~-~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+... .+|.. .|+++| +|+++++|++|+.|..+. ++...|++++|+||++ ||.| |+++.+++
T Consensus 148 ~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~-----~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~ 212 (362)
T 2c0r_A 148 LTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPF-----DLNQFGLVYAGAQKNL-GPSGVTVVIVRED 212 (362)
T ss_dssp EESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCC-----CGGGCSEEEEETTTTT-CCSSCEEEEEEGG
T ss_pred EeCCcCccceeccccccc------CCCEEEEEChhhccCCcc-----chhHCcEEEEeccccc-cCcCcEEEEEcHH
Confidence 6543 35664 677776 899999999999886431 2333599999999998 6888 99988775
No 96
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.64 E-value=8.1e-16 Score=152.73 Aligned_cols=194 Identities=16% Similarity=0.131 Sum_probs=126.3
Q ss_pred cCccCcHHHHHHHHHHhhhcCCCCCCCC--ccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhh
Q 015647 159 SENFVCRAVMEALGSHLTNKYSEGYPGA--RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTG 236 (403)
Q Consensus 159 Sen~~~p~V~eA~~s~l~~~y~eG~pgs--r~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~a 236 (403)
+..+.++.|++++...+...+ +++.. ++..+. ...++ .+++++++++|++++. .++.++|++++.+++.+
T Consensus 36 ~~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~~~--~~~~~-~l~~~la~~~g~~~~~---v~~~~g~t~al~~al~~ 107 (416)
T 1qz9_A 36 SLGARPVAALARAQAVIAEEW--GNGLIRSWNSAGW--RDLSE-RLGNRLATLIGARDGE---VVVTDTTSINLFKVLSA 107 (416)
T ss_dssp TSCCCBTTHHHHHHHHHHTCC--CCCGGGHHHHTSG--GGHHH-HHHHHHHTTTTCCTTS---EEECSCHHHHHHHHHHH
T ss_pred CcCCCcHHHHHHHHHHHHHHH--hccCccccchhhH--HHHHH-HHHHHHHHHcCCCccc---EEEeCChhHHHHHHHHh
Confidence 345678899999988876544 33322 111111 12233 3577899999997541 23345677888888887
Q ss_pred hc------cCCCeE-EecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015647 237 LL------LPGDRI-MGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 237 ll------~pGD~V-L~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
++ ++||+| ++....|+++..... ........+++++.+++ +++|++++.+ ++++|++..
T Consensus 108 ~~~~~~~~~~gd~vii~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~--------~~~l~~~i~~-~~~~v~~~~ 173 (416)
T 1qz9_A 108 ALRVQATRSPERRVIVTETSNFPTDLYIAE-----GLADMLQQGYTLRLVDS--------PEELPQAIDQ-DTAVVMLTH 173 (416)
T ss_dssp HHHHHHHHSTTCCEEEEETTSCHHHHHHHH-----HHHHHHCSSCEEEEESS--------GGGHHHHCST-TEEEEEEES
T ss_pred hcccccccCCCCcEEEEcCCCCCchHHHHH-----HHHHHhcCCceEEEeCc--------HHHHHHHhCC-CceEEEEec
Confidence 76 899974 555555543321000 00011100234444432 7889888864 678887765
Q ss_pred CC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCc-CCce-EEEEEeCC
Q 015647 310 SS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLR-GPRG-GIIFFRRG 379 (403)
Q Consensus 310 s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~-GP~G-G~I~~~~~ 379 (403)
.+ +|...|+++|.++|+++|+++++|++|+.|..+. ++. .+|++++|+||+|. ||++ |+++.+++
T Consensus 174 ~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~-----~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~ 244 (416)
T 1qz9_A 174 VNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPV-----DLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQ 244 (416)
T ss_dssp BCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCC-----CHHHHTCSEEEECSSSTTCCCTTCCCEEEECTT
T ss_pred cccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCC-----ChhhcCCCEEEecCcccCCCCCCCeEEEEECHH
Confidence 43 4788999999999999999999999999875432 121 37999999999974 6777 89988775
No 97
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.64 E-value=5.2e-15 Score=146.22 Aligned_cols=195 Identities=16% Similarity=0.150 Sum_probs=129.0
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCC---CCCcceEEeCChHHHHHHHHhhhcc
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDS---DNWGVNVQPYSCTSANFAVYTGLLL 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~---~~~~v~V~~~SGT~An~aal~all~ 239 (403)
.+|.|++++...+......+|+. ..|. .++.+..++++++++|.+. + ..+++++||+|+.+++.++++
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~l~~~l~~~l~~~~g~~~~~~~---~i~~~~g~~~a~~~~~~~l~~ 124 (407)
T 3nra_A 54 PTPGAFDLFSAGVQSGGVQAYTE---YRGD---LGIRDLLAPRLAAFTGAPVDARD---GLIITPGTQGALFLAVAATVA 124 (407)
T ss_dssp CCTTHHHHHHHHHHHTHHHHSCC---TTCC---HHHHHHHHHHHHHHHTSCCCTTT---SEEEESHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHHhcCCCCCcCC---CCCC---HHHHHHHHHHHHHHhCCCCCCCC---cEEEeCCcHHHHHHHHHHhCC
Confidence 57889999887765321101111 1122 1233334566888899741 2 134556688999999999999
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecC-----CCCCCCCHHHHHHHhccCCCcEEEEeCCC--C
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVN-----PQTGYIDYEKLEEKAMDYRPKILICGGSS--Y 312 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd-----~~~g~ID~d~Le~~i~~~~pklViv~~s~--~ 312 (403)
+||+|++....|.++. ..+...| .+++.++++ .+++.+|+++|++++++ ++++|++...+ +
T Consensus 125 ~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~npt 192 (407)
T 3nra_A 125 RGDKVAIVQPDYFANR---------KLVEFFE--GEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARVFLFSNPNNPA 192 (407)
T ss_dssp TTCEEEEEESCCTHHH---------HHHHHTT--CEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEEESSCTTT
T ss_pred CCCEEEEcCCcccchH---------HHHHHcC--CEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcEEEEcCCCCCC
Confidence 9999999887765432 1223334 345556652 24677999999999976 67877665443 4
Q ss_pred Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CC----CcccEEEEcCcCCCc--CCceEEEEEeC
Q 015647 313 PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PF----DYCDIVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 313 g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~----~~aDivt~StHKtL~--GP~GG~I~~~~ 378 (403)
|.+++ +++|.++|+++|+++++|++|+.+......... .+ ...++++.|++|+++ |.+.|+++.++
T Consensus 193 G~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 269 (407)
T 3nra_A 193 GVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR 269 (407)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH
T ss_pred CcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH
Confidence 66777 999999999999999999999875433111110 11 125689999999974 44558888765
No 98
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.64 E-value=5.2e-15 Score=144.73 Aligned_cols=200 Identities=14% Similarity=0.035 Sum_probs=135.3
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEe-CCh
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL-DSDNWGVNVQP-YSC 226 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~-~~~~~~v~V~~-~SG 226 (403)
.+.|.|..+++. .++.|++++...+......+|+.. + ..+ .|+++++++|+ +++ .|++ ++|
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~---~~~----l~~~la~~~g~~~~~----~i~~~~g~ 94 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVP----S---SEA----LRAKLKEVMQVPAGM----EVLLGNGS 94 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCC----C---HHH----HHHHHHHHHTCCTTC----EEEEEEHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----c---HHH----HHHHHHHHhCCCCcc----eEEEcCCH
Confidence 345777777776 488999999887764211223221 1 122 46678999998 443 3544 467
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
|+|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ ++.+|+++|++++++.++++|+
T Consensus 95 t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~ 162 (367)
T 3euc_A 95 DEIISMLALAAARPGAKVMAPVPGFVMYA---------MSAQFAG--LEFVGVPLRA-DFTLDRGAMLAAMAEHQPAIVY 162 (367)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEESCSCCSC---------HHHHTTT--CEEEEEECCT-TSCCCHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEcCCCHHHHH---------HHHHHcC--CeEEEecCCC-CCCCCHHHHHHHhhccCCCEEE
Confidence 88999999999999999999887765432 1223333 4566677764 6789999999999865789887
Q ss_pred EeCCC--CCccc---cHHHHHHHHHHc--CCEEEEeccccccccccccccCCCC--cccEEEEcCcCCC-cCCceEEEEE
Q 015647 307 CGGSS--YPREW---DYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSL-RGPRGGIIFF 376 (403)
Q Consensus 307 v~~s~--~g~~~---Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL-~GP~GG~I~~ 376 (403)
+...+ +|.++ ++++|.++|+++ |+++++|++|+... ..+..+ .++ ..++++.|++|+. .|.+.|++++
T Consensus 163 ~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~-~~~~~~-~~~~~~~~i~~~s~sK~~~~G~r~G~~~~ 240 (367)
T 3euc_A 163 LAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA-QESWMS-RLTDFGNLLVMRTVSKLGLAGIRLGYVAG 240 (367)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS-SCCSGG-GGGTCTTEEEEEECCCTTSCSCCEEEEEE
T ss_pred EcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc-ccchHH-HHhhCCCEEEEecchhhcccccCceeeee
Confidence 76444 45554 577888889999 99999999987522 111111 111 2558889999982 3344588888
Q ss_pred eCC
Q 015647 377 RRG 379 (403)
Q Consensus 377 ~~~ 379 (403)
+++
T Consensus 241 ~~~ 243 (367)
T 3euc_A 241 DPQ 243 (367)
T ss_dssp CHH
T ss_pred CHH
Confidence 653
No 99
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.64 E-value=3.1e-15 Score=148.85 Aligned_cols=180 Identities=17% Similarity=0.176 Sum_probs=125.7
Q ss_pred CccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc
Q 015647 160 ENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL 239 (403)
Q Consensus 160 en~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~ 239 (403)
...++++|++++. .| ++ . ..+++..++.++++||++..+ -.++++|||+|+.+++.++
T Consensus 39 ~~~~~~~v~~a~~-----~~--~~--------~---~~~~~~~~~~~a~~~g~~~~~--~~~~~~ggt~a~~~~~~~~-- 96 (374)
T 2aeu_A 39 GFLIDEKDKALLN-----TY--IG--------S---SYFAEKVNEYGLKHLGGDEND--KCVGFNRTSSAILATILAL-- 96 (374)
T ss_dssp CCCCCHHHHHHHT-----ST--TH--------H---HHHHHHHHHHHHHHHTCCTTE--EEEEESSHHHHHHHHHHHH--
T ss_pred CCCCCHHHHHHHH-----Hh--cC--------c---hHHHHHHHHHHHHHhCCCCcc--eEEEEcChHHHHHHHHHhC--
Confidence 5678999999986 12 11 1 223344555678899983111 1466788999999999987
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcE-EEEeCCCC--C-cc
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKI-LICGGSSY--P-RE 315 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pkl-Viv~~s~~--g-~~ 315 (403)
+||+|++....|++|++.. ..+...| .+++.+ +|+++|+++ . .++++ |++...++ | ..
T Consensus 97 ~gd~Vl~~~~~y~~~~~~~------~~~~~~g--~~~~~v--------~d~~~l~~~-~-~~~~~~v~~~~p~nptG~~~ 158 (374)
T 2aeu_A 97 KPKKVIHYLPELPGHPSIE------RSCKIVN--AKYFES--------DKVGEILNK-I-DKDTLVIITGSTMDLKVIEL 158 (374)
T ss_dssp CCSEEEEECSSSSCCTHHH------HHHHHTT--CEEEEE--------SCHHHHHTT-C-CTTEEEEEECBCTTSCBCCH
T ss_pred CCCEEEEecCCCCccHHHH------HHHHHcC--cEEEEe--------CCHHHHHhc-C-CCccEEEEEccCCCCCCCCc
Confidence 9999999998887765311 1122333 334443 388999887 4 47898 87765444 4 57
Q ss_pred ccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCceEEEEEeCC
Q 015647 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 316 ~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
.|+++|.++|+++|+++++|++|+.+.........++. .+|++++|+||+|.||++|+++++++
T Consensus 159 ~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~~ 223 (374)
T 2aeu_A 159 ENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKE 223 (374)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHH
T ss_pred ccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECHH
Confidence 89999999999999999999999876420000111222 37999999999999999999988764
No 100
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.64 E-value=2.2e-15 Score=152.24 Aligned_cols=167 Identities=18% Similarity=0.155 Sum_probs=121.6
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015647 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
|+.++|+ +++...++|+ ++++++|.+. .++++||++|+.+ +.+++++||+|++....|++......
T Consensus 58 ~~~y~r~--~~p~~~~l~~----~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~-- 123 (400)
T 3nmy_A 58 GFEYSRT--HNPTRFAYER----CVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFE-- 123 (400)
T ss_dssp SCCBTTT--CCHHHHHHHH----HHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHH--
T ss_pred CcccccC--CCHHHHHHHH----HHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHH--
Confidence 4445554 5677777765 5889999875 4778899999998 56789999999999988765432100
Q ss_pred Cccch-hhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccc
Q 015647 262 PGGKK-VSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAH 338 (403)
Q Consensus 262 ~~~~~-v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh 338 (403)
.. +...| +++++++. .|+++|++++++ ++++|++...+ .|.+.|+++|+++|+++|++|++|++|
T Consensus 124 ---~~~~~~~g--~~~~~v~~------~d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~ 191 (400)
T 3nmy_A 124 ---RVRRRTAG--LDFSFVDL------TDPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTF 191 (400)
T ss_dssp ---HTHHHHHC--CEEEEECT------TSHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred ---HhhHhhcC--eEEEEECC------CCHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCC
Confidence 00 11123 34555443 289999999874 67888887543 467889999999999999999999999
Q ss_pred cccccccccccCCCC-cccEEEEcCcCCCcCC---ceE-EEEEeCC
Q 015647 339 ISGLIAAKELASPFD-YCDIVTSTTHKSLRGP---RGG-IIFFRRG 379 (403)
Q Consensus 339 ~~Glia~g~~~~p~~-~aDivt~StHKtL~GP---~GG-~I~~~~~ 379 (403)
+.|... .|+. .+|+++.|++|+|.|| .|| +++.+++
T Consensus 192 ~~~~~~-----~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~ 232 (400)
T 3nmy_A 192 ASPMLQ-----RPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNA 232 (400)
T ss_dssp THHHHC-----CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCH
T ss_pred cccccC-----ChhhcCCcEEEecCccccCCCCCcceeEEEEeCCH
Confidence 876532 3444 3999999999999887 578 6666554
No 101
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.64 E-value=8.2e-16 Score=167.05 Aligned_cols=163 Identities=16% Similarity=0.112 Sum_probs=115.3
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCChH-HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYSCT-SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SGT-~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
++++++++||++. .+++++|+ +||.+++.+++++||+|++....|.++.. ++ +.+.|. ++++++
T Consensus 178 ~e~~lA~~~gae~-----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~-~~-------~~l~Ga--~~v~v~ 242 (730)
T 1c4k_A 178 AEKHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYN-SA-------LAMAGG--RPVYLQ 242 (730)
T ss_dssp HHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH-HH-------TTTTCC--EEEEEC
T ss_pred HHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHH-HH-------HHHCCC--EEEEEe
Confidence 5678999999986 35666765 89999999999999999999987654431 10 233443 333333
Q ss_pred cCCCC----CCCCHHHH-----HHHhccC--------CC-cEEEEeCCC-CCccccHHHHHHHHHHcCCEEEEecccccc
Q 015647 281 VNPQT----GYIDYEKL-----EEKAMDY--------RP-KILICGGSS-YPREWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 281 vd~~~----g~ID~d~L-----e~~i~~~--------~p-klViv~~s~-~g~~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
.+.+. +.+|+++| ++++++. +| |+|++..++ +|.+.|+++|+++|+++|++|++|+||+.+
T Consensus 243 ~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~ 322 (730)
T 1c4k_A 243 TNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGY 322 (730)
T ss_dssp EEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCG
T ss_pred CCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEcccccc
Confidence 22111 34788888 8888754 12 777766444 588899999999999999999999999876
Q ss_pred cccccccc--CCCC----ccc----EEEEcCcCCCcCCce-EEEEEeCC
Q 015647 342 LIAAKELA--SPFD----YCD----IVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 342 lia~g~~~--~p~~----~aD----ivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+...+..+ .++. .+| ++++|+||+|+||.+ |+|+++++
T Consensus 323 ~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~ 371 (730)
T 1c4k_A 323 EQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDS 371 (730)
T ss_dssp GGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECG
T ss_pred cccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecch
Confidence 43322111 2232 367 999999999999875 77777664
No 102
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.64 E-value=1e-15 Score=147.86 Aligned_cols=152 Identities=17% Similarity=0.130 Sum_probs=116.0
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccch-hhhcccceEEeeee
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKK-VSAASIFFESFPYK 280 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~-v~~~g~~~~vv~~~ 280 (403)
.++++++++|++. .++++|||+|+.+++.+++++||+|++....|.++.... .. ....| +++..++
T Consensus 3 l~~~la~~~g~~~-----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~------~~~~~~~g--~~~~~~~ 69 (331)
T 1pff_A 3 LEGKIAKLEHAEA-----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALF------EHQLRKFG--VEVDFID 69 (331)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHH------HTHHHHTT--CEEEEEC
T ss_pred HHHHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHH------HHHHHhcC--CEEEEeC
Confidence 3567999999874 578899999999999999999999999998876542110 00 01123 4455544
Q ss_pred cCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHH-cCCEEEEeccccccccccccccCCCC-ccc
Q 015647 281 VNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADK-CGAVLMCDMAHISGLIAAKELASPFD-YCD 356 (403)
Q Consensus 281 vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake-~Ga~LivDaAh~~Glia~g~~~~p~~-~aD 356 (403)
+ +|++++++++++ ++++|++...+ +|...|+++|.++|++ +|+++++|++|+.|.... +++ .+|
T Consensus 70 ~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~-----~~~~~~d 137 (331)
T 1pff_A 70 M------AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN-----PLDLGVD 137 (331)
T ss_dssp T------TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC-----GGGGTCS
T ss_pred C------CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC-----hhhcCCc
Confidence 2 588999998874 67888776543 5788899999999999 999999999999886532 223 389
Q ss_pred EEEEcCcCCCcCCc---eEEEEEeC
Q 015647 357 IVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 357 ivt~StHKtL~GP~---GG~I~~~~ 378 (403)
++++|+||+|+||. +|++++++
T Consensus 138 ~~~~s~~K~~~~~~~r~~G~~~~~~ 162 (331)
T 1pff_A 138 IVVHSATKYINGHTDVVAGLVCSRA 162 (331)
T ss_dssp EEEEETTTTTSSSSSCCCEEEEECH
T ss_pred EEEEECccccCCCCCceEEEEEeCc
Confidence 99999999998775 68888876
No 103
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.63 E-value=6.5e-15 Score=146.03 Aligned_cols=206 Identities=17% Similarity=0.107 Sum_probs=132.8
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCh
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPYSC 226 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~SG 226 (403)
+..|.|..+++. .++.|++++...+... ..+|+.. .| ..++++...+.+.+.+|. +++ ..+++++|
T Consensus 41 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g---~~~lr~~la~~~~~~~g~~~~~~---~v~~~~g~ 110 (389)
T 1o4s_A 41 EDVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDP---RG---IYELREGIAKRIGERYKKDISPD---QVVVTNGA 110 (389)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCT---TC---CHHHHHHHHHHHHHHHTCCCCGG---GEEEESHH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCHH---HEEEecCH
Confidence 345677666543 4789999998776432 1122111 11 233444333344444475 332 13444567
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcEE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pklV 305 (403)
++|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++++ ++.+|+++|++++++ ++++|
T Consensus 111 t~al~~~~~~l~~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v 178 (389)
T 1o4s_A 111 KQALFNAFMALLDPGDEVIVFSPVWVSYI---------PQIILAG--GTVNVVETFMSKNFQPSLEEVEGLLVG-KTKAV 178 (389)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHH---------HHHHHTT--CEEEEEECCGGGTTCCCHHHHHHTCCT-TEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHH---------HHHHHcC--CEEEEEecCCccCCCCCHHHHHHhccc-CceEE
Confidence 89999999999999999999988775532 1223334 34555666542 456899999999875 67877
Q ss_pred EEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CC---CcccEEEEcCcCCCc--CCceEE
Q 015647 306 ICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PF---DYCDIVTSTTHKSLR--GPRGGI 373 (403)
Q Consensus 306 iv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~---~~aDivt~StHKtL~--GP~GG~ 373 (403)
++...+ +|..++ +++|.++|+++|+++++|++|+.+... +.... .+ ...|+++.|+||+++ |.+.|+
T Consensus 179 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~-g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 257 (389)
T 1o4s_A 179 LINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYT-DEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGY 257 (389)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCS-SCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEE
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCCHhhcCCCCCcEEEEeechhhcCCcccceEE
Confidence 765433 466655 999999999999999999999876542 11111 11 247899999999983 334599
Q ss_pred EEEeCC
Q 015647 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++++++
T Consensus 258 l~~~~~ 263 (389)
T 1o4s_A 258 LISSEK 263 (389)
T ss_dssp EECCHH
T ss_pred EEeCHH
Confidence 988653
No 104
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.63 E-value=4.7e-15 Score=149.10 Aligned_cols=154 Identities=19% Similarity=0.157 Sum_probs=112.1
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
+++++++++|.+. .++++|||+|+++++.+++++||+|++....|++..... ...+... +++++.+++
T Consensus 61 l~~~la~~~g~~~-----~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~-----~~~~~~~--g~~~~~~~~ 128 (412)
T 2cb1_A 61 LEERLKALEGALE-----AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLF-----GQVLSLM--GVTVRYVDP 128 (412)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHH-----HHTTTTT--TCEEEEECS
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHH-----HHHHHHc--CCEEEEECC
Confidence 3556999999874 467789999999999999999999999998875543100 0001112 245555543
Q ss_pred CCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEE
Q 015647 282 NPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIV 358 (403)
Q Consensus 282 d~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDiv 358 (403)
|+++|++++++ ++++|++...+ .|.++|+++|+++|+++|+++++|++|+.|... ..++. .+|++
T Consensus 129 -------~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~~di~ 196 (412)
T 2cb1_A 129 -------EPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGAL----CRPLAWGAHVV 196 (412)
T ss_dssp -------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTS----CCGGGGTCSEE
T ss_pred -------CHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccc----CCccccCCeEE
Confidence 48999998874 67888876443 578899999999999999999999999887211 12333 48999
Q ss_pred EEcCcCCCcCCc---eEEEEEeCC
Q 015647 359 TSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 359 t~StHKtL~GP~---GG~I~~~~~ 379 (403)
++|+||++.||. ||+++.++.
T Consensus 197 ~~S~~K~~~~~~~~~G~~~~~~~~ 220 (412)
T 2cb1_A 197 VESLTKWASGHGSVLGGAVLSRET 220 (412)
T ss_dssp EEETTTTTTCSSCCCCEEEEECCC
T ss_pred EECCcccccCCCCcEEEEEEeccc
Confidence 999999998875 455555433
No 105
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.63 E-value=6.3e-15 Score=146.18 Aligned_cols=153 Identities=20% Similarity=0.241 Sum_probs=115.3
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
.+++++++++.+. .|+++||++|+.+++.+++++||+|++....|++..... . ......| .++..+++
T Consensus 57 l~~~la~~~~~~~-----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~--~---~~~~~~g--~~~~~~~~ 124 (386)
T 1cs1_A 57 VQRALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLF--D---SLAKRGC--YRVLFVDQ 124 (386)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH--H---HHHTTTS--CEEEEECT
T ss_pred HHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHH--H---HHHHhcC--CEEEEeCC
Confidence 3557999999873 577899999999999999999999999998875532100 0 0011222 44555443
Q ss_pred CCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEE
Q 015647 282 NPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIV 358 (403)
Q Consensus 282 d~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDiv 358 (403)
.|+++|++++++ ++++|++...+ .|.+.|+++|.++|+++|+++++|++|+.+... .++. .+|++
T Consensus 125 ------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----~~~~~~~di~ 192 (386)
T 1cs1_A 125 ------GDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ-----NPLALGADLV 192 (386)
T ss_dssp ------TCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----CGGGGTCSEE
T ss_pred ------CCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----CccccCceEE
Confidence 389999999974 68888876543 467889999999999999999999999887543 2233 38999
Q ss_pred EEcCcCCCcCCce---EEEEEeC
Q 015647 359 TSTTHKSLRGPRG---GIIFFRR 378 (403)
Q Consensus 359 t~StHKtL~GP~G---G~I~~~~ 378 (403)
++|+||+|+||.+ |++++++
T Consensus 193 ~~s~sK~~~~~~~~~~G~~~~~~ 215 (386)
T 1cs1_A 193 LHSCTKYLNGHSDVVAGVVIAKD 215 (386)
T ss_dssp EEETTTTTTCSSCCCCEEEEESS
T ss_pred EEcCcccccCCCCceeEEEEeCc
Confidence 9999999987763 8888876
No 106
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.62 E-value=4.4e-15 Score=145.11 Aligned_cols=200 Identities=12% Similarity=0.009 Sum_probs=136.6
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHH
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTS 228 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~ 228 (403)
.+-|.|..+++. .++.|++++...+...+ +|+... + .+ .|+++++++|++.+ ..+++++||+
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~~---~----~~----lr~~la~~~~~~~~---~v~~~~g~~~ 93 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAH--LYPDDS---M----IE----LKSTLAQKYKVQNE---NIIIGAGSDQ 93 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTT--SCCCTT---C----HH----HHHHHHHHHTCCGG---GEEEESSHHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhc--cCCCCC---h----HH----HHHHHHHHhCCCcc---eEEECCCHHH
Confidence 455777777666 48999999988765322 333321 1 12 45678899998764 2344567889
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015647 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++.+++ +|+++|+++++ .++++|++.
T Consensus 94 a~~~~~~~l~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~-~d~~~l~~~l~-~~~~~v~~~ 160 (365)
T 3get_A 94 VIEFAIHSKLNSKNAFLQAGVTFAMYE---------IYAKQCG--AKCYKTQSITHNL-DEFKKLYETHK-DEIKLIFLC 160 (365)
T ss_dssp HHHHHHHHHCCTTCEEEECSSCCTHHH---------HHHHHHT--CEEEECSSSSCCH-HHHHHHHHHTT-TTEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEeCCChHHHH---------HHHHHcC--CEEEEEecCCCCC-CCHHHHHHHhC-CCCCEEEEc
Confidence 999999999999999999987764432 1223334 3555666523467 99999999997 468888775
Q ss_pred CCC--CCccccHHHHHHHHH--HcCCEEEEecccccccc--ccccccCCCC-----cccEEEEcCcCCC--cCCceEEEE
Q 015647 309 GSS--YPREWDYGRFRQIAD--KCGAVLMCDMAHISGLI--AAKELASPFD-----YCDIVTSTTHKSL--RGPRGGIIF 375 (403)
Q Consensus 309 ~s~--~g~~~Di~~I~~Iak--e~Ga~LivDaAh~~Gli--a~g~~~~p~~-----~aDivt~StHKtL--~GP~GG~I~ 375 (403)
..+ +|.++|++++.+|++ ++|+++++|++|+.+.. ..+.....+. ..++++.|+||++ .|.+.|+++
T Consensus 161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 240 (365)
T 3get_A 161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240 (365)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence 443 577889999999888 66999999999985432 2111111111 2568899999996 344568888
Q ss_pred EeCC
Q 015647 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
++++
T Consensus 241 ~~~~ 244 (365)
T 3get_A 241 ANAN 244 (365)
T ss_dssp ECHH
T ss_pred cCHH
Confidence 8543
No 107
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.62 E-value=1.1e-15 Score=165.42 Aligned_cols=160 Identities=12% Similarity=0.056 Sum_probs=114.4
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
+++++|++||++. .+++++| +.||.+++.++++|||+|++....|.+.. ..+.+.|. ++++++
T Consensus 200 aE~~lA~~fGa~~-----a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~---------~~l~lsGa--~pv~v~ 263 (715)
T 3n75_A 200 AEQYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLT---------HLMMMSDV--TPIYFR 263 (715)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHH---------HHHHHSCC--EEEEEC
T ss_pred HHHHHHHHhCCCC-----ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHH---------HHHHHcCC--EEEEEe
Confidence 5667999999987 3566777 58999999999999999999998765543 12344553 344444
Q ss_pred cCCCCC----CC-----CHHHHHHHhccC-C---CcEEEE-eCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccc
Q 015647 281 VNPQTG----YI-----DYEKLEEKAMDY-R---PKILIC-GGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAK 346 (403)
Q Consensus 281 vd~~~g----~I-----D~d~Le~~i~~~-~---pklViv-~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g 346 (403)
.+.++. .+ |+++|+++++++ + |++|++ .++.+|.+.|+++|.++|++++ +++|+||+.|+...+
T Consensus 264 ~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~ 341 (715)
T 3n75_A 264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (715)
T ss_dssp CCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSG
T ss_pred ccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCC
Confidence 332222 24 899999999864 2 335555 4545688999999999998663 799999998864333
Q ss_pred ccc--CCCC---cccEE---EEcCcCCCcCC-ceEEEEEeCC
Q 015647 347 ELA--SPFD---YCDIV---TSTTHKSLRGP-RGGIIFFRRG 379 (403)
Q Consensus 347 ~~~--~p~~---~aDiv---t~StHKtL~GP-~GG~I~~~~~ 379 (403)
..+ .++. .+|++ ++|+||+|+|+ +||+|++++.
T Consensus 342 ~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~ 383 (715)
T 3n75_A 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD 383 (715)
T ss_dssp GGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESC
T ss_pred ccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCch
Confidence 222 2332 26765 99999999998 5788888765
No 108
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.62 E-value=6.2e-15 Score=145.14 Aligned_cols=200 Identities=17% Similarity=0.160 Sum_probs=135.2
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHH
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTS 228 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~ 228 (403)
...|.|..+.+. .++.|.+++...+.. ...|+.. .| ..+ .++.++++++++++ -.+++++|++
T Consensus 25 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~---~~---~~~----l~~~la~~~~~~~~---~v~~~~g~~~ 89 (381)
T 1v2d_A 25 LGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPP---AG---LPA----LREALAEEFAVEPE---SVVVTSGATE 89 (381)
T ss_dssp HTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCT---TC---CHH----HHHHHHHHHTSCGG---GEEEESSHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCC---CC---CHH----HHHHHHHhcCCChh---hEEEcCChHH
Confidence 445777666543 478999998877643 1111111 01 122 45678899998764 2345567899
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecC--CCCCCCCHHHHHHHhccCCCcEEE
Q 015647 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVN--PQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd--~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++ ++++.+|+++|++++.+ ++++|+
T Consensus 90 a~~~~~~~~~~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~~d~~~l~~~l~~-~~~~v~ 157 (381)
T 1v2d_A 90 ALYVLLQSLVGPGDEVVVLEPFFDVYL---------PDAFLAG--AKARLVRLDLTPEGFRLDLSALEKALTP-RTRALL 157 (381)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHH---------HHHHHTT--CEEEEEECEEETTEEECCHHHHHTTCCT-TEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHH---------HHHHHcC--CEEEEEeCCCCCccCCcCHHHHHHhcCc-CCEEEE
Confidence 999999999999999999988775542 1223334 345555554 33567999999998863 678887
Q ss_pred EeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCC----CCcccEEEEcCcCCCc--CCceEEEE
Q 015647 307 CGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP----FDYCDIVTSTTHKSLR--GPRGGIIF 375 (403)
Q Consensus 307 v~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p----~~~aDivt~StHKtL~--GP~GG~I~ 375 (403)
+...+ +|... ++++|.++|+++|+++++|++|+.+.. +....+ ....|+++.|+||+++ |.+.|+++
T Consensus 158 ~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 235 (381)
T 1v2d_A 158 LNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY--GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIV 235 (381)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS--SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEE
T ss_pred ECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc--CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEE
Confidence 76443 45555 489999999999999999999986543 111111 1247999999999873 44469998
Q ss_pred EeCC
Q 015647 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
++++
T Consensus 236 ~~~~ 239 (381)
T 1v2d_A 236 GPKE 239 (381)
T ss_dssp CCTT
T ss_pred eCHH
Confidence 8654
No 109
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.62 E-value=5.1e-15 Score=151.95 Aligned_cols=192 Identities=16% Similarity=0.138 Sum_probs=131.7
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh----c
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL----L 238 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al----l 238 (403)
..|.+.+++...+. .| +|...... .+-..++++..++++++++|++. +.+++++|++|+.+++.++ +
T Consensus 78 ~~p~v~~~~~~~~~-~~---~~~~~~~~-~~g~~~l~~~l~~~la~~~g~~~----~~~~~~ggt~a~~~al~~~~~~~~ 148 (474)
T 1wyu_B 78 YNPKLHEEAARLFA-DL---HPYQDPRT-AQGALRLMWELGEYLKALTGMDA----ITLEPAAGAHGELTGILIIRAYHE 148 (474)
T ss_dssp CCCHHHHHHHHTTS-SC---CTTSCGGG-CHHHHHHHHHHHHHHHHHHTCSE----EECCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-hc---CCCCchhh-ChHHHHHHHHHHHHHHHHHCCCc----eeecChHHHHHHHHHHHHHHHHHH
Confidence 45777777765422 12 33332101 22233455557788999999975 3345567899998866654 3
Q ss_pred cCCC-----eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC-C
Q 015647 239 LPGD-----RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-Y 312 (403)
Q Consensus 239 ~pGD-----~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-~ 312 (403)
++|| +|++....|+... ..+...| ++++.+++++ ++.+|+++|++++.+ ++++|++..++ +
T Consensus 149 ~~Gd~~~r~~Vlv~~~~h~~~~---------~~~~~~G--~~vv~v~~~~-~~~~d~~~L~~~i~~-~t~~v~~~~pn~~ 215 (474)
T 1wyu_B 149 DRGEGRTRRVVLVPDSAHGSNP---------ATASMAG--YQVREIPSGP-EGEVDLEALKRELGP-HVAALMLTNPNTL 215 (474)
T ss_dssp HTTCTTTCCEEEEETTSCTHHH---------HHHHHTT--CEEEEECBCT-TSSBCHHHHHHHCST-TEEEEEECSSCTT
T ss_pred hcCCccCCCEEEEeCCcChhhH---------HHHHHCC--CEEEEecCCC-CCCcCHHHHHHhhCC-CceEEEEECCCCC
Confidence 6888 9999887765432 1233444 4566666764 688999999999974 57877776543 5
Q ss_pred Ccc-ccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCC------ceEEEEEeCC
Q 015647 313 PRE-WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGP------RGGIIFFRRG 379 (403)
Q Consensus 313 g~~-~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP------~GG~I~~~~~ 379 (403)
|.+ .|+++|+++|+++|++|++|++|+.+... .. .+.. .+|++++|+||+|.+| +.|+++++++
T Consensus 216 G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g--~~-~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~ 287 (474)
T 1wyu_B 216 GLFERRILEISRLCKEAGVQLYYDGANLNAIMG--WA-RPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH 287 (474)
T ss_dssp SCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTT--TC-CHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGG
T ss_pred cccCCCHHHHHHHHHHcCCEEEEeCchhhhhcc--CC-CcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHH
Confidence 666 69999999999999999999999877542 11 1111 3899999999999876 3588888774
No 110
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.62 E-value=3.5e-15 Score=162.71 Aligned_cols=162 Identities=14% Similarity=0.070 Sum_probs=115.9
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
+++.+++++|++. .+++++| ++||.+++.++++|||+|++....|.+.. ..+...|. ++++++
T Consensus 210 ~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~---------~~~~~~G~--~~v~v~ 273 (755)
T 2vyc_A 210 SEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE---------QGLMLTGA--KPVYMV 273 (755)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHH---------HHHHHHCC--EEEEEC
T ss_pred HHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHH---------HHHHHcCC--EEEEEe
Confidence 5678999999985 3566676 57899999999999999999998764432 12334454 344444
Q ss_pred cCCCC----CCC-----CHHHHHHHhccC-CC--------cEEEEeCCC-CCccccHHHHHHHHHHcCCEEEEecccccc
Q 015647 281 VNPQT----GYI-----DYEKLEEKAMDY-RP--------KILICGGSS-YPREWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 281 vd~~~----g~I-----D~d~Le~~i~~~-~p--------klViv~~s~-~g~~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
.+.++ +.+ |+++|++++++. ++ ++|++..++ +|.+.|+++|+++|+++|++|++|+||+.+
T Consensus 274 ~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~ 353 (755)
T 2vyc_A 274 PSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_dssp CCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTT
T ss_pred CCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchh
Confidence 33211 236 999999999753 23 366665444 588999999999999999999999999876
Q ss_pred ccccccc--cCCCCc--ccE------EEEcCcCCCcCCc-eEEEEEeCC
Q 015647 342 LIAAKEL--ASPFDY--CDI------VTSTTHKSLRGPR-GGIIFFRRG 379 (403)
Q Consensus 342 lia~g~~--~~p~~~--aDi------vt~StHKtL~GP~-GG~I~~~~~ 379 (403)
+...+.. ..++.. +|+ +++|+||+|+||+ ||+|+++++
T Consensus 354 ~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_dssp GGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECC
T ss_pred cccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCc
Confidence 4332211 122223 565 9999999999997 577877765
No 111
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.62 E-value=2.1e-14 Score=141.55 Aligned_cols=207 Identities=13% Similarity=0.046 Sum_probs=133.9
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcc-eEEeCC
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGV-NVQPYS 225 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v-~V~~~S 225 (403)
.+.|.|..+++. .++.|++++...+.... .+|+.. .|. .++++...+.+++.+|. +++ - .+++++
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g~---~~l~~~la~~~~~~~g~~~~~~---~~v~~~~g 95 (389)
T 1gd9_A 26 KDVISLGIGEPDFDTPQHIKEYAKEALDKGL-THYGPN---IGL---LELREAIAEKLKKQNGIEADPK---TEIMVLLG 95 (389)
T ss_dssp SSCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TCC---HHHHHHHHHHHHHHHCCCCCTT---TSEEEESS
T ss_pred cCeEecCCCCCCCCCCHHHHHHHHHHHhCCC-CCCCCC---CCc---HHHHHHHHHHHHHHhCCCCCCC---CeEEEcCC
Confidence 355677666553 47899999887775421 122111 122 23443333344444484 433 2 345567
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcE
Q 015647 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pkl 304 (403)
|++|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++++ +..+|+++|++++++ ++++
T Consensus 96 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~ 163 (389)
T 1gd9_A 96 ANQAFLMGLSAFLKDGEEVLIPTPAFVSYA---------PAVILAG--GKPVEVPTYEEDEFRLNVDELKKYVTD-KTRA 163 (389)
T ss_dssp TTHHHHHHHTTTCCTTCEEEEEESCCTTHH---------HHHHHHT--CEEEEEECCGGGTTCCCHHHHHHHCCT-TEEE
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCchhHH---------HHHHHCC--CEEEEeccCCccCCCCCHHHHHHhcCc-CceE
Confidence 899999999999999999999988775542 1223334 34555565532 346899999999875 6788
Q ss_pred EEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEecccccccccccccc--CCC---CcccEEEEcCcCCCc--CCceE
Q 015647 305 LICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPF---DYCDIVTSTTHKSLR--GPRGG 372 (403)
Q Consensus 305 Viv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~---~~aDivt~StHKtL~--GP~GG 372 (403)
|++...+ +|..+ ++++|.++|+++|+++++|++|+.+........ ..+ ...|+++.|+||+++ |.+.|
T Consensus 164 v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 243 (389)
T 1gd9_A 164 LIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLG 243 (389)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCE
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceE
Confidence 7765443 45555 699999999999999999999987654211011 111 137899999999873 33348
Q ss_pred EEEEeCC
Q 015647 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+++++++
T Consensus 244 ~~~~~~~ 250 (389)
T 1gd9_A 244 FVAAPSW 250 (389)
T ss_dssp EEECCHH
T ss_pred EEEECHH
Confidence 8888653
No 112
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.62 E-value=2.9e-15 Score=150.37 Aligned_cols=151 Identities=16% Similarity=0.149 Sum_probs=112.1
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
+|+++++++|.+. .++++|||+|+++++. ++++||+|++....|++.+... . ..+...| ++++.+++
T Consensus 60 lr~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~--~---~~~~~~G--~~v~~v~~ 126 (393)
T 1n8p_A 60 LERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYF--T---KVANAHG--VETSFTND 126 (393)
T ss_dssp HHHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHH--H---HTSTTTC--SCCEEESS
T ss_pred HHHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHH--H---HHHHHcC--cEEEEeCC
Confidence 4667999999874 5788999999999999 9999999999998776543100 0 0112223 34444443
Q ss_pred CCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHc----CCEEEEeccccccccccccccCCCC-c
Q 015647 282 NPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKC----GAVLMCDMAHISGLIAAKELASPFD-Y 354 (403)
Q Consensus 282 d~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~----Ga~LivDaAh~~Glia~g~~~~p~~-~ 354 (403)
+ | ++|++++++ ++++|++...+ .|.++|+++|.++|+++ |++|++|++|+.|... .++. .
T Consensus 127 ~------d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-----~~~~~~ 193 (393)
T 1n8p_A 127 L------L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-----NPLNFG 193 (393)
T ss_dssp H------H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-----CGGGGT
T ss_pred C------h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-----CHHHcC
Confidence 2 7 889988864 67888886543 47889999999999999 9999999999988642 2333 3
Q ss_pred ccEEEEcCcCCCcCCc---eEEEEEeC
Q 015647 355 CDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 355 aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
+|++++|+||+++++. ||++++++
T Consensus 194 ~di~~~S~sK~~g~~G~rigG~~~~~~ 220 (393)
T 1n8p_A 194 ADIVVHSATKYINGHSDVVLGVLATNN 220 (393)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESC
T ss_pred CeEEEEECcccccCCCCceeEEEEeCC
Confidence 8999999999875442 48888864
No 113
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.61 E-value=1.5e-14 Score=141.84 Aligned_cols=202 Identities=16% Similarity=0.168 Sum_probs=134.7
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCh
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPYSC 226 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~SG 226 (403)
.+-|.|..+++. .+|.|++++...+.... .++ ..+. .++.+..++++++++| ++.+ ..+++++|
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y-----~~~~---~~~~~~l~~~l~~~~g~~~~~~---~v~~~~g~ 99 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQEI-YGY-----TTRP---DSYNESIVNWLYRRHNWKIKSE---WLIYSPGV 99 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCC-----BCCC---HHHHHHHHHHHHHHHCCCCCGG---GEEEESCH
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHhCCC-CCC-----CCCC---HHHHHHHHHHHHHHhCCCCcHH---HeEEcCCh
Confidence 345677666554 47999999988775421 111 1122 3444456677889998 5553 23445678
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecC-C--CCCCCCHHHHHHHhccCCCc
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVN-P--QTGYIDYEKLEEKAMDYRPK 303 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd-~--~~g~ID~d~Le~~i~~~~pk 303 (403)
|+|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++ + .+..+|+++|++++++ ++
T Consensus 100 ~~a~~~~~~~~~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~ 166 (391)
T 4dq6_A 100 IPAISLLINELTKANDKIMIQEPVYSPFN---------SVVKNNN--RELIISPLQKLENGNYIMDYEDIENKIKD--VK 166 (391)
T ss_dssp HHHHHHHHHHHSCTTCEEEECSSCCTHHH---------HHHHHTT--CEEEECCCEECTTSCEECCHHHHHHHCTT--EE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCHHHH---------HHHHHcC--CeEEeeeeeecCCCceEeeHHHHHHHhhc--CC
Confidence 89999999999999999999987765532 1223334 345555554 2 2235899999999976 88
Q ss_pred EEEEeCCC--CCcc---ccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCc-------ccEEEEcCcCCC--cCC
Q 015647 304 ILICGGSS--YPRE---WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDY-------CDIVTSTTHKSL--RGP 369 (403)
Q Consensus 304 lViv~~s~--~g~~---~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~-------aDivt~StHKtL--~GP 369 (403)
+|++...+ +|.+ .++++|.++|+++|+++++|++|+.+... +....++.. ..+++.|+||++ .|.
T Consensus 167 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~ 245 (391)
T 4dq6_A 167 LFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILK-KHKHIPMASISKEFEKNTITCMAPTKTFNIAGL 245 (391)
T ss_dssp EEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT-TCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGG
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccC-CCCccCHHHcCccccCcEEEEEechhhccCccc
Confidence 87766443 3555 57899999999999999999999764332 211122211 228899999987 344
Q ss_pred ceEEEEEeC
Q 015647 370 RGGIIFFRR 378 (403)
Q Consensus 370 ~GG~I~~~~ 378 (403)
+.|++++++
T Consensus 246 r~G~~~~~~ 254 (391)
T 4dq6_A 246 QSSYVVLPD 254 (391)
T ss_dssp CCEEEECCS
T ss_pred ceEEEEeCC
Confidence 568888876
No 114
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.61 E-value=1.4e-14 Score=139.60 Aligned_cols=203 Identities=16% Similarity=0.187 Sum_probs=131.7
Q ss_pred HHHHHHHHhhhcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCc
Q 015647 141 DIMEKEKQRQFKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWG 218 (403)
Q Consensus 141 ~li~~e~~rq~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~ 218 (403)
+.+.++....++.|.|-.++|+ ++|.|++++...+.... +|| .....+ .|+.+++++|++++
T Consensus 6 ~~~~~~~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~--~y~-------~~~~~~----lr~~la~~~~~~~~--- 69 (337)
T 3p1t_A 6 EAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARIN--RYP-------FDAEPR----VMRKLAEHFSCPED--- 69 (337)
T ss_dssp --------CCCCCEECSSCCCCSCCCHHHHHHHHHHGGGTT--SCC-------TTHHHH----HHHHHHHHHTSCGG---
T ss_pred hhccccccCCCCceEeeCCCCCCCCCHHHHHHHHHhhhhhc--cCC-------CCchHH----HHHHHHHHhCcCHH---
Confidence 3344554556667888877776 48999999987654321 222 111222 46679999999864
Q ss_pred ceEEeCC-hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHh
Q 015647 219 VNVQPYS-CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKA 297 (403)
Q Consensus 219 v~V~~~S-GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i 297 (403)
.|++++ +++++.+++.++ +||+|++....|.+.. ..+...| .+++++++++ ++.+|+++|+++
T Consensus 70 -~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~---------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~- 133 (337)
T 3p1t_A 70 -NLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYR---------ARIAVSG--LRHFEIGLTD-DLLLDPNDLAQV- 133 (337)
T ss_dssp -GEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHH---------HHHTTSC--CEEEEECBCT-TSSBCHHHHTTC-
T ss_pred -HEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHH---------HHHHHcC--CEEEEecCCC-CCCCCHHHHHhh-
Confidence 456655 566888888877 9999999887765432 1123333 4566667664 568999999875
Q ss_pred ccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCc--CCceEE
Q 015647 298 MDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLR--GPRGGI 373 (403)
Q Consensus 298 ~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~--GP~GG~ 373 (403)
.++++|++...+ +|.++|+++|.++|+++++ +++|.+|.. +...+.........++++.|++|+++ |.+.|+
T Consensus 134 --~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~-~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~ 209 (337)
T 3p1t_A 134 --SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVD-YSSFRARGLAYGENELVFRSFSKSYGLAGLRLGA 209 (337)
T ss_dssp --CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGG-GSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEE
T ss_pred --cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChh-hccccccccccCCCEEEEeeCchhccCcchheEE
Confidence 357888776544 5789999999999999997 666999873 22111111112236799999999983 555698
Q ss_pred EEEeCC
Q 015647 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++.+++
T Consensus 210 ~~~~~~ 215 (337)
T 3p1t_A 210 LFGPSE 215 (337)
T ss_dssp EECCHH
T ss_pred EEeCHH
Confidence 887653
No 115
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.61 E-value=1.7e-14 Score=140.91 Aligned_cols=197 Identities=13% Similarity=0.029 Sum_probs=133.9
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHH
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSA 229 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~A 229 (403)
+-|.|..+++. +++.|++++...+...+ ++|. .. .+ ..|+++++++|++++ ..+++++||+|
T Consensus 33 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~---~~-~lr~~la~~~~~~~~---~v~~~~g~t~a 96 (363)
T 3ffh_A 33 KITKLSSNENPLGTSKKVAAIQANSSVETE--IYPD-------GW---AS-SLRKEVADFYQLEEE---ELIFTAGVDEL 96 (363)
T ss_dssp CCEECSSCSCTTCCCHHHHHHHHTCBSCCC--BC--------------CH-HHHHHHHHHHTCCGG---GEEEESSHHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHHhh--cCCC-------cc---hH-HHHHHHHHHhCCChh---hEEEeCCHHHH
Confidence 45777767666 48999999886543211 2221 11 12 246779999998764 23445678899
Q ss_pred HHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015647 230 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 230 n~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ ++.+|+++|++++.+ ++++|++..
T Consensus 97 ~~~~~~~~~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~ 163 (363)
T 3ffh_A 97 IELLTRVLLDTTTNTVMATPTFVQYR---------QNALIEG--AEVREIPLLQ-DGEHDLEGMLNAIDE-KTTIVWICN 163 (363)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCHHHH---------HHHHHHT--CEEEEEECCT-TSCCCHHHHHHHCCT-TEEEEEEES
T ss_pred HHHHHHHHccCCCEEEEcCCChHHHH---------HHHHHcC--CEEEEecCCC-CCCcCHHHHHHhccc-CCCEEEEeC
Confidence 99999999999999999887654321 1223333 4566667764 678999999999874 688887764
Q ss_pred CC--CCccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCC-----CcccEEEEcCcCCCc--CCceEEEEEeC
Q 015647 310 SS--YPREWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPF-----DYCDIVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 310 s~--~g~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~-----~~aDivt~StHKtL~--GP~GG~I~~~~ 378 (403)
.+ +|..+|+++|.++|+.+ |+++++|++|+.... +.....+ ...++++.|++|+++ |.+.|++++++
T Consensus 164 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 241 (363)
T 3ffh_A 164 PNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT--PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK 241 (363)
T ss_dssp SCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS--SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC--ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH
Confidence 43 57889999999999888 999999999985432 1111111 123477889999873 33448888855
Q ss_pred C
Q 015647 379 G 379 (403)
Q Consensus 379 ~ 379 (403)
+
T Consensus 242 ~ 242 (363)
T 3ffh_A 242 E 242 (363)
T ss_dssp H
T ss_pred H
Confidence 3
No 116
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.60 E-value=2.2e-14 Score=141.35 Aligned_cols=206 Identities=16% Similarity=0.115 Sum_probs=132.8
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeC-C
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPY-S 225 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~-S 225 (403)
++.+.|..+++. .++.|++++...+.... .+|+.. .|. .++++...+.+.+.+|. +++ .|+++ +
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g~---~~l~~~la~~~~~~~g~~~~~~----~v~~~~g 98 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGK-TRYGPA---AGE---PRLREAIAQKLQRDNGLCYGAD----NILVTNG 98 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TCC---HHHHHHHHHHHHHHHCCCCCGG----GEEEESH
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCC---HHHHHHHHHHHHHhcCCCCChh----hEEEcCC
Confidence 445777666553 47899999887764321 122111 122 33444444455556664 332 35444 5
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcE
Q 015647 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pkl 304 (403)
|++|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++++ ++.+|+++|++++++ ++++
T Consensus 99 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~ 166 (388)
T 1j32_A 99 GKQSIFNLMLAMIEPGDEVIIPAPFWVSYP---------EMVKLAE--GTPVILPTTVETQFKVSPEQIRQAITP-KTKL 166 (388)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCTHHH---------HHHHHTT--CEEEEECCCGGGTTCCCHHHHHHHCCT-TEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCChhHH---------HHHHHcC--CEEEEecCCcccCCCCCHHHHHHhcCc-CceE
Confidence 689999999999999999999988775532 1223334 34555555532 356899999999874 6787
Q ss_pred EEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEecccccccccccccc--CCCC----cccEEEEcCcCCCc--CCce
Q 015647 305 LICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD----YCDIVTSTTHKSLR--GPRG 371 (403)
Q Consensus 305 Viv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~----~aDivt~StHKtL~--GP~G 371 (403)
|++...+ +|..+ ++++|.++|+++|+++++|++|+.+........ ..+. ..|+++.|+||+++ |.+.
T Consensus 167 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~ 246 (388)
T 1j32_A 167 LVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRV 246 (388)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCC
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccce
Confidence 7765443 45554 599999999999999999999887543211111 1111 27899999999983 3345
Q ss_pred EEEEEeCC
Q 015647 372 GIIFFRRG 379 (403)
Q Consensus 372 G~I~~~~~ 379 (403)
|+++.+++
T Consensus 247 G~~~~~~~ 254 (388)
T 1j32_A 247 GFLAGPVP 254 (388)
T ss_dssp EEEECCHH
T ss_pred EEEEeCHH
Confidence 88887653
No 117
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.60 E-value=6.3e-14 Score=138.49 Aligned_cols=207 Identities=13% Similarity=0.109 Sum_probs=133.0
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcC---CCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeC
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKY---SEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPY 224 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y---~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~ 224 (403)
+.|.|..+... .++.|++++...+.... ..+|+. ..|. .++.+...+.+.+.+| ++++ ..++++
T Consensus 36 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~---~~g~---~~lr~~la~~l~~~~g~~~~~~---~i~~~~ 106 (398)
T 3ele_A 36 NVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTS---AQGD---VETRAAIAEFLNNTHGTHFNAD---NLYMTM 106 (398)
T ss_dssp GCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCC---TTCC---HHHHHHHHHHHHHHHCCCCCGG---GEEEES
T ss_pred CeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCC---CCCc---HHHHHHHHHHHHHHhCCCCChH---HEEEcc
Confidence 45666655332 47899999887765410 011211 1122 2233333344556666 3443 234455
Q ss_pred ChHHHHHHHHhhhccCC-CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCc
Q 015647 225 SCTSANFAVYTGLLLPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPK 303 (403)
Q Consensus 225 SGT~An~aal~all~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pk 303 (403)
+|++|+.+++.+++++| |+|++....|.+.. ..+...| .+++.+++++++..+|+++|++++.+ +++
T Consensus 107 g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~ 174 (398)
T 3ele_A 107 GAAASLSICFRALTSDAYDEFITIAPYFPEYK---------VFVNAAG--ARLVEVPADTEHFQIDFDALEERINA-HTR 174 (398)
T ss_dssp SHHHHHHHHHHHHCCSTTCEEEEESSCCTHHH---------HHHHHTT--CEEEEECCCTTTSSCCHHHHHHTCCT-TEE
T ss_pred CHHHHHHHHHHHHcCCCCCEEEEeCCCchhhH---------HHHHHcC--CEEEEEecCCcCCcCCHHHHHHHhCc-CCC
Confidence 67999999999999999 99999887765432 1223333 45666777655668999999999874 678
Q ss_pred EEEEeCCC--CCcccc---HHHHHHHHHH------cCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCC--cC
Q 015647 304 ILICGGSS--YPREWD---YGRFRQIADK------CGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSL--RG 368 (403)
Q Consensus 304 lViv~~s~--~g~~~D---i~~I~~Iake------~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL--~G 368 (403)
+|++...+ +|.+++ +++|.++|++ +|+++++|.+|..........+.... ..++++.|++|++ .|
T Consensus 175 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 254 (398)
T 3ele_A 175 GVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPG 254 (398)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTT
T ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCcc
Confidence 88775444 456666 6777789998 99999999999864322111221111 2568899999997 34
Q ss_pred CceEEEEEeCC
Q 015647 369 PRGGIIFFRRG 379 (403)
Q Consensus 369 P~GG~I~~~~~ 379 (403)
.+.|++++++.
T Consensus 255 ~r~G~~~~~~~ 265 (398)
T 3ele_A 255 ERIGYVLVPDE 265 (398)
T ss_dssp TCCEEEECCTT
T ss_pred ceeEEEEEcch
Confidence 45589888765
No 118
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.60 E-value=3.3e-14 Score=140.40 Aligned_cols=217 Identities=15% Similarity=0.096 Sum_probs=133.6
Q ss_pred hHHHHHHHHHHHhhhcccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--C
Q 015647 137 PEIFDIMEKEKQRQFKGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--L 212 (403)
Q Consensus 137 ~ei~~li~~e~~rq~~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~ 212 (403)
.++++...+-....++.|.|..+++.. +|.|++++...+.... .+|+.. .| ..++.+...+.+.+.+| +
T Consensus 17 ~~~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g---~~~lr~~ia~~~~~~~g~~~ 89 (391)
T 3h14_A 17 MDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDA-LGYTVA---LG---LPALRQRIARLYGEWYGVDL 89 (391)
T ss_dssp HHHHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC--------------C---CHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CC---hHHHHHHHHHHHHHHhCCCC
Confidence 345554444333345667887776654 7889999987765421 122111 11 12233322333444445 4
Q ss_pred CCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHH
Q 015647 213 DSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYE 291 (403)
Q Consensus 213 ~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d 291 (403)
+++ ..+++++||+|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++++ ..+|++
T Consensus 90 ~~~---~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~ 155 (391)
T 3h14_A 90 DPG---RVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYR---------QILRALG--LVPVDLPTAPENRLQPVPA 155 (391)
T ss_dssp CGG---GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHH---------HHHHHTT--CEEEEEECCGGGTTSCCHH
T ss_pred CHH---HEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHH---------HHHHHcC--CEEEEeecCcccCCCCCHH
Confidence 443 2345567899999999999999999999887664432 1223334 455666665432 368999
Q ss_pred HHHHHhccCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCC--CCcccEEEEcCcC
Q 015647 292 KLEEKAMDYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASP--FDYCDIVTSTTHK 364 (403)
Q Consensus 292 ~Le~~i~~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p--~~~aDivt~StHK 364 (403)
+|+++ ++++|++...+ +|..++ +++|.++|+++|+++++|++|+..... +..... +...++++.|++|
T Consensus 156 ~l~~~----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK 230 (391)
T 3h14_A 156 DFAGL----DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYE-AKAVTALELTDECYVINSFSK 230 (391)
T ss_dssp HHTTS----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSS-SCCCCGGGTCSSSEEEEESSS
T ss_pred HHHhc----CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccC-CCCcChhhcCCCEEEEEechh
Confidence 99876 57888776444 455665 888999999999999999999754322 111111 1125688999999
Q ss_pred CC--cCCceEEEEEeCC
Q 015647 365 SL--RGPRGGIIFFRRG 379 (403)
Q Consensus 365 tL--~GP~GG~I~~~~~ 379 (403)
++ .|.+.|+++.+++
T Consensus 231 ~~g~~G~r~G~~~~~~~ 247 (391)
T 3h14_A 231 YFSMTGWRVGWMVVPED 247 (391)
T ss_dssp TTCCTTSCCEEEECCGG
T ss_pred ccCCccceeEEEEeCHH
Confidence 87 3445588887654
No 119
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.60 E-value=3.9e-14 Score=139.62 Aligned_cols=207 Identities=15% Similarity=0.169 Sum_probs=133.8
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC--CC-CCcceEEeCC
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD--SD-NWGVNVQPYS 225 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~--~~-~~~v~V~~~S 225 (403)
...|.|..+.+. .++.|++++...+... ..+|+.. .|. .++++...+.+++.+|.+ ++ . .+++++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g~---~~l~~~la~~l~~~~g~~~~~~~~---v~~~~g 99 (386)
T 1u08_A 30 HQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPM---TGV---QALREAIAQKTERLYGYQPDADSD---ITVTAG 99 (386)
T ss_dssp TTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TCC---HHHHHHHHHHHHHHHSCCCCTTTT---EEEESS
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCCCC---CCC---HHHHHHHHHHHHHHhCCCCCCCCC---EEEcCC
Confidence 345676665442 5789999998877531 1122111 122 234443344455556743 32 1 345567
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEE
Q 015647 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklV 305 (403)
|++|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++++++.+|+++|++++. .++++|
T Consensus 100 ~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v 167 (386)
T 1u08_A 100 ATEALYAAITALVRNGDEVICFDPSYDSYA---------PAIALSG--GIVKRMALQPPHFRVDWQEFAALLS-ERTRLV 167 (386)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTTHH---------HHHHHTT--CEEEEEECCTTTCCCCHHHHHHHCC-TTEEEE
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCchhHH---------HHHHHcC--CEEEEeecCcccCcCCHHHHHHhhc-ccCEEE
Confidence 889999999999999999999988775532 1223334 4556666654456799999999986 467888
Q ss_pred EEeCCC--CCccc---cHHHHHHHHHHcCCEEEEecccccccccccccc--CCC---CcccEEEEcCcCCCc--CCceEE
Q 015647 306 ICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPF---DYCDIVTSTTHKSLR--GPRGGI 373 (403)
Q Consensus 306 iv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~---~~aDivt~StHKtL~--GP~GG~ 373 (403)
++...+ +|... ++++|.++|+++|+++++|++|........... ..+ ...|+++.|+||+++ |.+.|+
T Consensus 168 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 247 (386)
T 1u08_A 168 ILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGY 247 (386)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEE
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEE
Confidence 776443 45555 478999999999999999999986432211111 112 137899999999874 334588
Q ss_pred EEEeCC
Q 015647 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++++++
T Consensus 248 ~~~~~~ 253 (386)
T 1u08_A 248 CVAPAP 253 (386)
T ss_dssp EECCHH
T ss_pred EEcCHH
Confidence 887653
No 120
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.59 E-value=3.8e-14 Score=140.43 Aligned_cols=188 Identities=19% Similarity=0.136 Sum_probs=126.7
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCcc-ccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--c
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARY-YTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--L 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~-~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~ 239 (403)
.+|.|++++...+.... .+..+.+. +.-.+...+ .++++++++|.+. .|++++|+++|.+++..+. +
T Consensus 61 ~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~----l~~~la~~~~~~~-----~i~~~sG~~a~~~~~~~l~~~~ 130 (401)
T 2bwn_A 61 QHPVVLAAMHEALEAVG-AGSGGTRNISGTTAYHRR----LEAEIAGLHQKEA-----ALVFSSAYNANDATLSTLRVLF 130 (401)
T ss_dssp GCHHHHHHHHHHHHHHC-SCCCSBTTTBCCBHHHHH----HHHHHHHHTTCSE-----EEEESCHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHcC-CCCCCcCcccCChHHHHH----HHHHHHHHhCCCc-----EEEECCcHHHHHHHHHHHhcCC
Confidence 37889999988775422 11111121 222233333 4667999999853 5778999998888887763 5
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc---CCCcEEEEeCCC--CCc
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD---YRPKILICGGSS--YPR 314 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~---~~pklViv~~s~--~g~ 314 (403)
+||+|++....|.+.. ..+...| .+++.++++ |+++|+++++. .++++|++...+ +|.
T Consensus 131 ~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~ 193 (401)
T 2bwn_A 131 PGLIIYSDSLNHASMI---------EGIKRNA--GPKRIFRHN------DVAHLRELIAADDPAAPKLIAFESVYSMDGD 193 (401)
T ss_dssp TTCEEEEETTCCHHHH---------HHHHHSC--CCEEEECTT------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCC
T ss_pred CCCEEEECchhhHHHH---------HHHHHcC--CeEEEEcCC------CHHHHHHHHHhhccCCceEEEEecCcCCCCC
Confidence 9999999987765432 1223334 344555542 78999998864 357888776543 478
Q ss_pred cccHHHHHHHHHHcCCEEEEecccccccccc-c--ccc-CCC-CcccEEEEcCcCCCcCCceEEEEEeC
Q 015647 315 EWDYGRFRQIADKCGAVLMCDMAHISGLIAA-K--ELA-SPF-DYCDIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 315 ~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g--~~~-~p~-~~aDivt~StHKtL~GP~GG~I~~~~ 378 (403)
+.|+++|.++|+++|+++++|++|+.|.... + ... ..+ +..|+++.|++|+|++ .||+++.++
T Consensus 194 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~~ 261 (401)
T 2bwn_A 194 FGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAASA 261 (401)
T ss_dssp BCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEECH
T ss_pred cCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecCH
Confidence 8999999999999999999999999876431 1 110 011 1368999999999854 568888754
No 121
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.58 E-value=8e-14 Score=136.63 Aligned_cols=199 Identities=16% Similarity=0.066 Sum_probs=128.2
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCh
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPYSC 226 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~SG 226 (403)
++.|.|..+.+. .++.|++++...+.... .+|+.. .|. .++++...+.+.+.+| ++++ -.+++++|
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~~~---~~l~~~la~~~~~~~g~~~~~~---~v~~~~g~ 98 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEGK-THYTDS---RGI---LELREKISELYKDKYKADIIPD---NIIITGGS 98 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TCC---HHHHHHHHHHHHHHSSCCCCGG---GEEEESSH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcCc-cCCCCC---CCC---HHHHHHHHHHHHHHhCCCCChh---hEEECCCh
Confidence 345676666553 47899999887765321 122111 111 2343332333434344 3333 23455678
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
++|+.+++.+++++||+|++....|.+.. ..+...| .+++.++ +|+++|++++++ ++++|+
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~---------~~~~~~g--~~~~~v~-------~d~~~l~~~l~~-~~~~v~ 159 (370)
T 2z61_A 99 SLGLFFALSSIIDDGDEVLIQNPCYPCYK---------NFIRFLG--AKPVFCD-------FTVESLEEALSD-KTKAII 159 (370)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSCCTHHH---------HHHHHTT--CEEEEEC-------SSHHHHHHHCCS-SEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhHH---------HHHHHcC--CEEEEeC-------CCHHHHHHhccc-CceEEE
Confidence 99999999999999999999998775542 1123333 3444443 789999999875 678777
Q ss_pred EeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc-cCCC---CcccEEEEcCcCCCc--CCceEEEEEeC
Q 015647 307 CGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL-ASPF---DYCDIVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 307 v~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~~p~---~~aDivt~StHKtL~--GP~GG~I~~~~ 378 (403)
+...+ +|...|.+ |.++|+++|+++++|++|+.+....... ...+ ...|+++.|+||+++ |.+.|++++++
T Consensus 160 ~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 238 (370)
T 2z61_A 160 INSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND 238 (370)
T ss_dssp EESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred EcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH
Confidence 65443 57788999 9999999999999999999765421100 0111 136899999999983 33358988876
Q ss_pred C
Q 015647 379 G 379 (403)
Q Consensus 379 ~ 379 (403)
+
T Consensus 239 ~ 239 (370)
T 2z61_A 239 E 239 (370)
T ss_dssp H
T ss_pred H
Confidence 3
No 122
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.58 E-value=5.7e-15 Score=143.89 Aligned_cols=197 Identities=12% Similarity=0.022 Sum_probs=127.0
Q ss_pred eeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh
Q 015647 156 LIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT 235 (403)
Q Consensus 156 LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~ 235 (403)
|..+.++..+++++++... +. +..+...|...+...+++ +++++++|.+. .++++||++|+.+++.
T Consensus 15 l~~~~~p~~~~~~~~~~~~----~~-~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~al~ 80 (357)
T 3lws_A 15 QISGHGKRNVGVLKTAFAA----VA-DEMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVALR 80 (357)
T ss_dssp ESSBSSCCBHHHHHHHHTT----SC-TTCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHH----hh-cccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHHHH
Confidence 5567777777777665532 21 112222333334445554 46889999865 4677899999999999
Q ss_pred hhccCCC--eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC-
Q 015647 236 GLLLPGD--RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY- 312 (403)
Q Consensus 236 all~pGD--~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~- 312 (403)
+++.+|| .|++.+..|..... .+......+ .++++++. +++.+|+++|+++. ++++|++..+++
T Consensus 81 ~~~~~gd~~~vi~~~~~~~~~~~------~~~~~~~~g--~~~~~v~~--~~~~~d~~~l~~~~---~~~~v~~~~p~np 147 (357)
T 3lws_A 81 IWSDETDNRTVAYHPLCHLEIHE------QDGLKELHP--IETILVGA--ADRLMTLDEIKALP---DIACLLLELPQRE 147 (357)
T ss_dssp HHHHHHTCCEEEECTTCHHHHSS------TTHHHHHSS--CEEEECSC--TTSCCCHHHHHTCC---SCSEEEEESSBGG
T ss_pred HHhhcCCCcEEEecccceeeeec------cchhhhccC--cEEEEecC--CCCCcCHHHHhcCc---CcceEEEEccccc
Confidence 9999998 67766544322110 000112223 34555543 35789999999873 378887765442
Q ss_pred --Cccc---cHHHHHHHHHHcCCEEEEeccccccccc-cccccCCC-CcccEEEEcCcCCCcCCceEEEEEeCC
Q 015647 313 --PREW---DYGRFRQIADKCGAVLMCDMAHISGLIA-AKELASPF-DYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 313 --g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia-~g~~~~p~-~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
|.++ ++++|.++|+++|++|++|++|..+... .+.....+ ..+|+++.|+||+|.||.||+++.+++
T Consensus 148 ~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~ 221 (357)
T 3lws_A 148 IGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPAA 221 (357)
T ss_dssp GTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECHH
T ss_pred CCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCHH
Confidence 5555 5899999999999999999998733221 11111111 247899999999998999988887653
No 123
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.58 E-value=2.2e-14 Score=140.28 Aligned_cols=202 Identities=15% Similarity=0.200 Sum_probs=130.9
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCChH
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPYSCT 227 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~SGT 227 (403)
+-|.|..+++. .+|.|++++...+.... .+++.. ..++++..++.+++.+| ++++ ..+++++||
T Consensus 25 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~~---~v~~~~g~~ 92 (383)
T 3kax_A 25 ELIHAWIADMDFEVPQPIQTALKKRIEHPI-FGYTLP--------PENIGDIICNWTKKQYNWDIQKE---WIVFSAGIV 92 (383)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSCC-CCCCCC--------CTTHHHHHHHHHHHHHCCCCCGG---GEEEESCHH
T ss_pred CeeecccccCCCCCCHHHHHHHHHHHhcCC-CCCCCC--------CHHHHHHHHHHHHHHhCCCCChh---hEEEcCCHH
Confidence 44666655554 38999999988775421 122221 12344445667888888 4443 234556788
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC--CCCCHHHHHHHhccCCCcEE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT--GYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~--g~ID~d~Le~~i~~~~pklV 305 (403)
+|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++++ ..+|+++|++++. .++++|
T Consensus 93 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v 160 (383)
T 3kax_A 93 PALSTSIQAFTKENESVLVQPPIYPPFF---------EMVTTNN--RQLCVSPLQKQNDTYAIDFEHLEKQFQ-QGVKLM 160 (383)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCHHHH---------HHHHHTT--CEEEECCCEEETTEEECCHHHHHHHHT-TTCCEE
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCcHHHH---------HHHHHcC--CEEEeccceecCCcEEEcHHHHHHHhC-cCCeEE
Confidence 9999999999999999999987765432 1223334 345555554322 3489999999994 578888
Q ss_pred EEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCCC-------cccEEEEcCcCCCc--CCce
Q 015647 306 ICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-------YCDIVTSTTHKSLR--GPRG 371 (403)
Q Consensus 306 iv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-------~aDivt~StHKtL~--GP~G 371 (403)
++...+ +|...+ +++|.++|+++|+++++|++|+..... +....++. ..++++.|+||+++ |.+.
T Consensus 161 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 239 (383)
T 3kax_A 161 LLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYA-DHTHTPFASLSEELAARTITCMAPSKTFNIAGLQA 239 (383)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT-TCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCC
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccC-CCCceeHhhcCccccCcEEEEEEChhhccCcchhh
Confidence 776444 455655 666677799999999999999764332 21111111 13488999999873 3445
Q ss_pred EEEEEeC
Q 015647 372 GIIFFRR 378 (403)
Q Consensus 372 G~I~~~~ 378 (403)
|++++++
T Consensus 240 G~~~~~~ 246 (383)
T 3kax_A 240 SIIIIPN 246 (383)
T ss_dssp EEEECCC
T ss_pred eEEEeCC
Confidence 8888744
No 124
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.58 E-value=3.6e-14 Score=140.29 Aligned_cols=203 Identities=16% Similarity=0.198 Sum_probs=131.1
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCChH
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPYSCT 227 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~SGT 227 (403)
..+.|..+.+. .++.|++++...+.... .+|+ .+ ..++++...+.+++.+| ++.+ ..+++++|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~-----~~---~~~l~~~la~~l~~~~g~~~~~~---~v~~t~g~~ 99 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDETV-LGYT-----GP---TEEYKKTVKKWMKDRHQWDIQTD---WIINTAGVV 99 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHCC-CSSB-----CC---CHHHHHHHHHHHHHHHCCCCCGG---GEEEESSHH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcCC-CCCC-----CC---cHHHHHHHHHHHHHHhCCCCChh---hEEEcCCHH
Confidence 45666655552 47899999988775321 1221 12 23344333344555567 4443 134455678
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC--CCCCHHHHHHHhccCCCcEE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT--GYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~--g~ID~d~Le~~i~~~~pklV 305 (403)
+|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++++ ..+|+++|++++++.++++|
T Consensus 100 ~a~~~~~~~l~~~gd~vl~~~p~~~~~~---------~~~~~~g--~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v 168 (399)
T 1c7n_A 100 PAVFNAVREFTKPGDGVIIITPVYYPFF---------MAIKNQE--RKIIECELLEKDGYYTIDFQKLEKLSKDKNNKAL 168 (399)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCTHHH---------HHHHTTT--CEEEECCCEEETTEEECCHHHHHHHHTCTTEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHhHH---------HHHHHcC--CEEEecccccCCCCEEEcHHHHHHHhccCCCcEE
Confidence 9999999999999999999887765542 1123333 345555553222 24999999999975578888
Q ss_pred EEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC---C----cccEEEEcCcCCC--cCCce
Q 015647 306 ICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---D----YCDIVTSTTHKSL--RGPRG 371 (403)
Q Consensus 306 iv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~----~aDivt~StHKtL--~GP~G 371 (403)
++...+ +|.+++ +++|.++|+++|++|++|++|+..... +....++ . ..++++.|++|++ .|.+.
T Consensus 169 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 247 (399)
T 1c7n_A 169 LFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMP-GYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGM 247 (399)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCT-TCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCC
T ss_pred EEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCcccHHHcCccccCcEEEEEeChhhccccchhe
Confidence 775444 456777 999999999999999999999875432 1111111 1 2458899999987 34455
Q ss_pred EEEEEeC
Q 015647 372 GIIFFRR 378 (403)
Q Consensus 372 G~I~~~~ 378 (403)
|++++++
T Consensus 248 G~~~~~~ 254 (399)
T 1c7n_A 248 SNIIIKN 254 (399)
T ss_dssp EEEECCC
T ss_pred EEEEECC
Confidence 8998864
No 125
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.58 E-value=2.8e-14 Score=142.72 Aligned_cols=204 Identities=13% Similarity=0.053 Sum_probs=131.1
Q ss_pred hcccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC------CCCCCCcceEE
Q 015647 151 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD------LDSDNWGVNVQ 222 (403)
Q Consensus 151 ~~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg------~~~~~~~v~V~ 222 (403)
.+.|.|..+.+.. ++.|++++...+......+|+.. .|. .++ |+.++++++ ++++ ..++
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~---~~l----r~~la~~~~~~~g~~~~~~---~i~~ 110 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNL---DGL---PEL----KQEASRFAKLFVNIDIPAR---ACVP 110 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCT---TCC---HHH----HHHHHHHHHHHHCCCCCGG---GEEE
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCC---CCh---HHH----HHHHHHHHHHhhCCCCCcc---cEEE
Confidence 3457776666553 89999999887764221222221 111 223 334555554 3343 1344
Q ss_pred eCChHHHHHHHHhhhc--cCCC--eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhc
Q 015647 223 PYSCTSANFAVYTGLL--LPGD--RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAM 298 (403)
Q Consensus 223 ~~SGT~An~aal~all--~pGD--~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~ 298 (403)
+++||+|+.+++.+++ ++|| +|++....|.+.. ..+...|. +++.+++++++..+|+++|+++++
T Consensus 111 t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~---------~~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~ 179 (437)
T 3g0t_A 111 TVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNK---------LQCRILGQ--KFESFDLFEYRGEKLREKLESYLQ 179 (437)
T ss_dssp ESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHH---------HHHHHHTC--CCEEEEGGGGCTTHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHH---------HHHHHcCC--EEEEEeecCCCCccCHHHHHHHHh
Confidence 4567889999999998 9999 9999887664432 12233343 445556654455799999999995
Q ss_pred cCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEecccccccccccccc--------CCC---CcccEEEEcC
Q 015647 299 DYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELA--------SPF---DYCDIVTSTT 362 (403)
Q Consensus 299 ~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--------~p~---~~aDivt~St 362 (403)
..++++|++...+ +|..++ +++|.++|+++|++|++|++|+.+... +..+ ..+ ...++++.|+
T Consensus 180 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 258 (437)
T 3g0t_A 180 TGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFR-KDYSHPGEPLYQPSVANYTDNYILALSS 258 (437)
T ss_dssp TTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTT-SCCCSTTSSCCCCCGGGTCSCEEEEEES
T ss_pred cCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccC-CCcCcccccchhhccCCCCCcEEEEEcC
Confidence 5678888765443 455665 778899999999999999999864332 1111 111 1256889999
Q ss_pred cCCCc--CCceEEEEEeCC
Q 015647 363 HKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 363 HKtL~--GP~GG~I~~~~~ 379 (403)
||+++ |.+.|+++++++
T Consensus 259 sK~~~~~G~r~G~~~~~~~ 277 (437)
T 3g0t_A 259 SKAFSYAGQRIGVLMISGK 277 (437)
T ss_dssp TTTTSCGGGCCEEEEECHH
T ss_pred ccCCCCccceeEEEEECHH
Confidence 99863 444588888653
No 126
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.58 E-value=1.5e-14 Score=143.91 Aligned_cols=205 Identities=18% Similarity=0.125 Sum_probs=129.6
Q ss_pred hcccceeccCc-----cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEe
Q 015647 151 FKGIELIASEN-----FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQP 223 (403)
Q Consensus 151 ~~~l~LiaSen-----~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~ 223 (403)
...|.|..+.+ ..++.+++++...+.... .+|+.. .| ..++++...+.+.+.+| ++++ -.+++
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g---~~~l~~~la~~l~~~~g~~~~~~---~v~~t 107 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NYYGDS---EG---LPELRKAIVEREKRKNGVDITPD---DVRVT 107 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CSCCCT---TC---CHHHHHHHHHHHHHHHCCCCCGG---GEEEE
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CC---cHHHHHHHHHHHHHhcCCCCCHH---HEEEc
Confidence 34567766655 357899999887775421 112111 12 12344333333444444 3332 13444
Q ss_pred CChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHhccCCC
Q 015647 224 YSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKAMDYRP 302 (403)
Q Consensus 224 ~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i~~~~p 302 (403)
++|++|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ ++..+|+++|++++++ ++
T Consensus 108 ~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~ 175 (406)
T 1xi9_A 108 AAVTEALQLIFGALLDPGDEILVPGPSYPPYT---------GLVKFYG--GKPVEYRTIEEEDWQPDIDDIRKKITD-RT 175 (406)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH---------HHHHHTT--CEEEEEEEEGGGTSEECHHHHHHHCCT-TE
T ss_pred CChHHHHHHHHHHhCCCCCEEEEcCCCCccHH---------HHHHHcC--CEEEEeecCCCcCCcCCHHHHHHhhCc-Cc
Confidence 56789999999999999999999988764432 1223334 3455555553 2446899999999975 67
Q ss_pred cEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CC-Ccc-cEEEEcCcCCCc--CCce
Q 015647 303 KILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PF-DYC-DIVTSTTHKSLR--GPRG 371 (403)
Q Consensus 303 klViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~-~~a-Divt~StHKtL~--GP~G 371 (403)
++|++...+ +|..++ +++|.++|+++|+++++|++|+.+.. .+.... .+ ... |++++|+||++. |.+.
T Consensus 176 ~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (406)
T 1xi9_A 176 KAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTY-EGEHISPGSLTKDVPVIVMNGLSKVYFATGWRL 254 (406)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBS-SSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCC
T ss_pred eEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHcCCCceEEEEeccccccCCCccEE
Confidence 887765433 455554 99999999999999999999987643 211110 11 135 789999999984 4445
Q ss_pred EEEE--EeC
Q 015647 372 GIIF--FRR 378 (403)
Q Consensus 372 G~I~--~~~ 378 (403)
|+++ .++
T Consensus 255 G~~~~~~~~ 263 (406)
T 1xi9_A 255 GYMYFVDPE 263 (406)
T ss_dssp EEEEEECTT
T ss_pred EEEEEecCc
Confidence 8887 554
No 127
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.57 E-value=3.5e-14 Score=141.58 Aligned_cols=208 Identities=15% Similarity=0.137 Sum_probs=133.1
Q ss_pred hhcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC--CCCCcceEEeCC
Q 015647 150 QFKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD--SDNWGVNVQPYS 225 (403)
Q Consensus 150 q~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~--~~~~~v~V~~~S 225 (403)
+...|.|..+.+. .++.|++++...+... ..+|+.. .| ..++++...+.+.+.+|.+ ++. ..+++++
T Consensus 24 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g---~~~l~~~la~~~~~~~g~~~~~~~--~v~~t~g 94 (411)
T 2o0r_A 24 RIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYPPG---PG---SAPLRRAIAAQRRRHFGVDYDPET--EVLVTVG 94 (411)
T ss_dssp TTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TC---CHHHHHHHHHHHHHHHCCCCCTTT--SEEEEEH
T ss_pred cCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCC---CC---CHHHHHHHHHHHHHHcCCCCCCCc--eEEEeCC
Confidence 3445777666543 4789999998877541 1122211 11 1234444344455556753 310 0244456
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC--CCCCCHHHHHHHhccCCCc
Q 015647 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ--TGYIDYEKLEEKAMDYRPK 303 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~--~g~ID~d~Le~~i~~~~pk 303 (403)
|++|+.+++.+++++||+|++....|.+.. ..+...|. +++.++++++ ++.+|+++|++++++ +++
T Consensus 95 ~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~---------~~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~l~~-~~~ 162 (411)
T 2o0r_A 95 ATEAIAAAVLGLVEPGSEVLLIEPFYDSYS---------PVVAMAGA--HRVTVPLVPDGRGFALDADALRRAVTP-RTR 162 (411)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTTHH---------HHHHHTTC--EEEEEECEEETTEEECCHHHHHHHCCT-TEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCCcHhHH---------HHHHHcCC--EEEEeeccccccCCCCCHHHHHHhhcc-Cce
Confidence 789999999999999999999998876542 12233443 4555555432 346999999999874 678
Q ss_pred EEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEecccccccccccccc--CCC---CcccEEEEcCcCCCc--CCce
Q 015647 304 ILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPF---DYCDIVTSTTHKSLR--GPRG 371 (403)
Q Consensus 304 lViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~---~~aDivt~StHKtL~--GP~G 371 (403)
+|++...+ +|...+ +++|.++|+++|+++++|++|+.+........ ..+ ...|+++.|+||+++ |.+.
T Consensus 163 ~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 242 (411)
T 2o0r_A 163 ALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKI 242 (411)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCE
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceE
Confidence 88766433 455555 58999999999999999999987543211111 011 237999999999874 3346
Q ss_pred EEEEEeC
Q 015647 372 GIIFFRR 378 (403)
Q Consensus 372 G~I~~~~ 378 (403)
|++++++
T Consensus 243 G~~~~~~ 249 (411)
T 2o0r_A 243 GWACGPA 249 (411)
T ss_dssp EEEECCH
T ss_pred EEEeeCH
Confidence 8988864
No 128
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.57 E-value=1.2e-13 Score=135.81 Aligned_cols=202 Identities=15% Similarity=0.115 Sum_probs=132.2
Q ss_pred cceeccCcc--CcHHHHHHHHHHhhhcC--CCCCCCCccccchHHHHHHHHHHHHHHHHH--cCCCCCCCcceEEeCC-h
Q 015647 154 IELIASENF--VCRAVMEALGSHLTNKY--SEGYPGARYYTGNQYIDQIENLCFERALKA--FDLDSDNWGVNVQPYS-C 226 (403)
Q Consensus 154 l~LiaSen~--~~p~V~eA~~s~l~~~y--~eG~pgsr~~~G~~~~~~lE~~arerla~l--fg~~~~~~~v~V~~~S-G 226 (403)
|.|..+++. .++.|++++...+.... ..+|+. ... .++++...+.+.+. ++++++ .|++++ +
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~~-~~l~~~la~~l~~~~g~~~~~~----~v~~~~G~ 101 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPE------RDA-VELRDELAAYITKQTGVAVTRD----NLWAANGS 101 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCC------TTC-HHHHHHHHHHHHHHHCCCCCGG----GEEEESHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCC------ccH-HHHHHHHHHhhhhcccCCCChH----hEEECCCh
Confidence 777766664 47899999888775421 111211 111 23433322333333 444443 455555 5
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
++|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++. ++.+|++++++++++.++++|+
T Consensus 102 ~~al~~~~~~l~~~gd~Vl~~~~~y~~~~---------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~ 169 (369)
T 3cq5_A 102 NEILQQLLQAFGGPGRTALGFQPSYSMHP---------ILAKGTH--TEFIAVSRGA-DFRIDMDVALEEIRAKQPDIVF 169 (369)
T ss_dssp HHHHHHHHHHHCSTTCEEEEEESSCTHHH---------HHHHHTT--CEEEEEECCT-TSSCCHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCChHHHH---------HHHHHcC--CEEEEecCCc-CCCCCHHHHHHHhhccCCCEEE
Confidence 77898999999999999999988775542 1123334 3455666653 4579999999998754688887
Q ss_pred EeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--c-ccEEEEcCcCCCc--CCceEEEEEeCC
Q 015647 307 CGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--Y-CDIVTSTTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 307 v~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~-aDivt~StHKtL~--GP~GG~I~~~~~ 379 (403)
+...+ +|...|++++.++|+.+++++++|++|+.+........ -++ . .++++.|+||+++ |.+.|+++++++
T Consensus 170 ~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 248 (369)
T 3cq5_A 170 VTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATT-LLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPA 248 (369)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGG-GTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTH
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHH-HHhhCCCCEEEEEechHhcCCcccceEEEEeCHH
Confidence 76443 57889999999999999999999999987653211111 011 2 4588999999984 344599988764
No 129
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.57 E-value=9.6e-14 Score=138.43 Aligned_cols=207 Identities=15% Similarity=0.146 Sum_probs=127.6
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CC-CCCcceEEeCCh
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DS-DNWGVNVQPYSC 226 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~-~~~~v~V~~~SG 226 (403)
+.|.|..+.+. .++.|++++...+......+|+. ..|. .++++...+.+.+.+|. ++ + ..+++++|
T Consensus 38 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~l~~~ia~~~~~~~g~~~~~~~---~v~~t~g~ 108 (412)
T 2x5d_A 38 DIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYST---SRGI---PRLRRAISHWYRDRYDVQIDPES---EAIVTIGS 108 (412)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHTC---------C---TTCC---HHHHHHHHHHHHHHHCCCCCTTT---SEEEESCH
T ss_pred CEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCc---HHHHHHHHHHHHHHhCCCCCCCc---CEEEcCCh
Confidence 34677666553 47899999887654321111111 1111 23333222233333485 32 2 13556678
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCC-CCCHHHHHHHhccCCCcEE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTG-YIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g-~ID~d~Le~~i~~~~pklV 305 (403)
++|+.+++.+++++||+|++....|.++. ..+...| .+++.++++++++ .+|+++|++++. .++++|
T Consensus 109 ~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v 176 (412)
T 2x5d_A 109 KEGLAHLMLATLDHGDTILVPNPSYPIHI---------YGAVIAG--AQVRSVPLVPGIDFFNELERAIRESI-PKPRMM 176 (412)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHH---------HHHHHHT--CEEEEEECSTTSCHHHHHHHHHHTEE-SCCSEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHH---------HHHHHcC--CEEEEeecCCccCCCCCHHHHHHhcc-cCceEE
Confidence 99999999999999999999987765432 1123334 3556666664323 378999999887 468888
Q ss_pred EEeCCC--CCcccc---HHHHHHHHHHcCCEEEEecccccccccccccc--CCC---CcccEEEEcCcCCCc--CCceEE
Q 015647 306 ICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPF---DYCDIVTSTTHKSLR--GPRGGI 373 (403)
Q Consensus 306 iv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~---~~aDivt~StHKtL~--GP~GG~ 373 (403)
++...+ +|..++ +++|.++|+++|+++++|++|+.+........ ..+ ...|+++.|+||+|+ |.+.|+
T Consensus 177 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (412)
T 2x5d_A 177 ILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGF 256 (412)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEE
T ss_pred EECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEE
Confidence 775443 455554 78899999999999999999987653211110 112 136899999999983 445588
Q ss_pred EEEeCC
Q 015647 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++++++
T Consensus 257 ~~~~~~ 262 (412)
T 2x5d_A 257 MVGNPE 262 (412)
T ss_dssp EEECHH
T ss_pred EEcCHH
Confidence 888653
No 130
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.57 E-value=2.5e-14 Score=147.47 Aligned_cols=160 Identities=19% Similarity=0.199 Sum_probs=116.7
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015647 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
|.+..+++ ++++++++|.+. .+++++|++|+.+++. ++++||+|++....|++..... ...+...
T Consensus 131 g~~~~~~l----~~~la~~~g~~~-----~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~-----~~~~~~~ 195 (464)
T 1ibj_A 131 GNPTRDAL----ESLLAKLDKADR-----AFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLL-----SQVVPRS 195 (464)
T ss_dssp CCHHHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHH-----HHTSGGG
T ss_pred CCHHHHHH----HHHHHHHhCCCe-----EEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHH-----HHHHHHc
Confidence 45544444 456889999864 4778899999988875 7899999999988775542100 0001222
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015647 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| .+++.+++ .|+++|++++.+ ++++|++...+ +|.++|+++|+++|+++|+++++|++|+.|...
T Consensus 196 G--~~v~~v~~------~d~~~l~~~i~~-~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~---- 262 (464)
T 1ibj_A 196 G--VVVKRVNT------TKLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLS---- 262 (464)
T ss_dssp T--CEEEEECT------TSHHHHHHHCCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTC----
T ss_pred C--CEEEEeCC------CCHHHHHHHhcc-CceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 3 34555543 289999999864 68888887544 467889999999999999999999999887532
Q ss_pred cCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015647 349 ASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.+++ .+|++++|+||+|+||. +|+++++++
T Consensus 263 -~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~ 296 (464)
T 1ibj_A 263 -RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 296 (464)
T ss_dssp -CGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSH
T ss_pred -ChhhcCCEEEEECCcccccCCCCCcEEEEEEChH
Confidence 2333 38999999999998774 489988763
No 131
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.56 E-value=5.2e-15 Score=151.17 Aligned_cols=156 Identities=12% Similarity=0.111 Sum_probs=106.9
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCC-hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYS-CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~S-GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
+++++++ ||++. .+++++ +|+||.+++.+++++||+|++....|.+.. ..+...|.. +++++
T Consensus 62 ~~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~---------~~~~~~G~~--~~~v~ 124 (446)
T 2x3l_A 62 SMKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVL---------HALDISQQE--GHFIE 124 (446)
T ss_dssp HHHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHH---------HHHHHHTCC--EEECE
T ss_pred HHHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHH---------HHHHHcCCe--EEEEe
Confidence 5667999 99874 355555 568999999999999999999998765443 123344443 34444
Q ss_pred c--CCCC---CCCCHHHHHHHhccCCCcEEEEeCC-CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCC-CC
Q 015647 281 V--NPQT---GYIDYEKLEEKAMDYRPKILICGGS-SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP-FD 353 (403)
Q Consensus 281 v--d~~~---g~ID~d~Le~~i~~~~pklViv~~s-~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p-~~ 353 (403)
+ +++. +.+|+++| +. .++++|++..+ .+|.+.|+++|.++|+++|+++++|++|+..+...+. +.. ..
T Consensus 125 ~~~~~~~~~~~~~d~~~l---~~-~~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~ 199 (446)
T 2x3l_A 125 THQSPLTNHYNKVNLSRL---NN-DGHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLN 199 (446)
T ss_dssp EEECTTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGG
T ss_pred CeeccccCcCCCCCHHHH---cC-CCceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHH
Confidence 4 4321 45788877 22 35788776654 4688899999999999999999999999873312221 111 11
Q ss_pred -cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 354 -YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 354 -~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|++++|+||++.|+.| |+++++++
T Consensus 200 ~g~Di~~~S~~K~l~~~~g~g~l~~~~~ 227 (446)
T 2x3l_A 200 YQADYVVQSFHKTLPALTMGSVLYIHKN 227 (446)
T ss_dssp GTCSEEEECHHHHSSSCTTCEEEEEETT
T ss_pred cCCCEEEECCccccccccccEEEEEcCC
Confidence 389999999999888765 88888775
No 132
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.56 E-value=3.3e-14 Score=141.86 Aligned_cols=204 Identities=14% Similarity=0.103 Sum_probs=127.9
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCh
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPYSC 226 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~SG 226 (403)
...|.|..+.+. .++.|++++ ..+... ..+|+.. .| ..++++...+.+...+| .+++ -.++++||
T Consensus 43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~-~~~y~~~---~g---~~~l~~~la~~~~~~~g~~~~~~---~v~~~~g~ 111 (409)
T 2gb3_A 43 VRIHHLNIGQPDLKTPEVFFERI-YENKPE-VVYYSHS---AG---IWELREAFASYYKRRQRVDVKPE---NVLVTNGG 111 (409)
T ss_dssp CEEEECSSCCCCSCCCTHHHHHH-HHTCCS-SCCCCCT---TC---CHHHHHHHHHHHHHTSCCCCCGG---GEEEESHH
T ss_pred CCEEeccCCCCCCCCCHHHHHHH-HHHhcC-CCCCCCC---CC---cHHHHHHHHHHHHHHhCCCCCHH---HEEEeCCH
Confidence 445676665553 478899999 776432 1122211 11 22344333333444444 3332 13445568
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHhccCCCcEE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i~~~~pklV 305 (403)
|+|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ ++..+ +++|++++++ ++++|
T Consensus 112 t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~-~~~l~~~l~~-~~~~v 178 (409)
T 2gb3_A 112 SEAILFSFAVIANPGDEILVLEPFYANYN---------AFAKIAG--VKLIPVTRRMEEGFAI-PQNLESFINE-RTKGI 178 (409)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTHHH---------HHHHHHT--CEEEEEECCGGGTSCC-CTTGGGGCCT-TEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHH---------HHHHHcC--CEEEEeccCCCCCCcc-HHHHHHhhCc-CCeEE
Confidence 99999999999999999999988775432 1223334 3455566653 22334 8888888864 67877
Q ss_pred EEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccC--CCCcccEEEEcCcCCCc--CCceEEEEE
Q 015647 306 ICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFDYCDIVTSTTHKSLR--GPRGGIIFF 376 (403)
Q Consensus 306 iv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~~aDivt~StHKtL~--GP~GG~I~~ 376 (403)
++...+ +|..+ ++++|.++|+++|++|++|++|+.+......... .+...|++++|+||+++ |.+.|++++
T Consensus 179 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 258 (409)
T 2gb3_A 179 VLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLIT 258 (409)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEEC
T ss_pred EECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEE
Confidence 766443 45554 6899999999999999999999876432211110 11237899999999983 334599988
Q ss_pred eC
Q 015647 377 RR 378 (403)
Q Consensus 377 ~~ 378 (403)
++
T Consensus 259 ~~ 260 (409)
T 2gb3_A 259 RN 260 (409)
T ss_dssp SC
T ss_pred Cc
Confidence 76
No 133
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.56 E-value=3.9e-15 Score=153.34 Aligned_cols=178 Identities=13% Similarity=0.005 Sum_probs=120.0
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccC----CCeEEecCCCCCccccccccCCccch
Q 015647 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLP----GDRIMGLDSPSGGHLSHGYHTPGGKK 266 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~p----GD~VL~~~~ehgghlsh~~~~~~~~~ 266 (403)
|......+|+.....+.+++|.+... + .++.+++|.++++++.+.+++ ++.|++....|.+ +. +.
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~~-~-~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkS------v~---kA 160 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSVA-S-CFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKS------CF---KS 160 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTCC-E-EEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHH------HH---HH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCc-e-EEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHH------HH---HH
Confidence 44556678877788899999998642 1 244445664555555555443 8899888754322 22 45
Q ss_pred hhhcccceEEeeeecCCCCCCCCHHHHHHHhccCC---CcEEEEeCCCCC--ccccHHHHHHHHHHcCCEEEEecccccc
Q 015647 267 VSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR---PKILICGGSSYP--REWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 267 v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~---pklViv~~s~~g--~~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
+.+.|.....+....+.+.+.+|+++|+++|++++ +.+|++..+.|+ ...|+++|++||+++|++||||+||++.
T Consensus 161 l~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~ 240 (450)
T 3bc8_A 161 MVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQ 240 (450)
T ss_dssp HHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTT
T ss_pred HHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchh
Confidence 56667654444333333467899999999998753 234455566666 5789999999999999999999999975
Q ss_pred cccccccc-CCC--CcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 342 LIAAKELA-SPF--DYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 342 lia~g~~~-~p~--~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
......++ ..+ +++|+++.|+|||+..|.| +++++++.
T Consensus 241 ~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~ 282 (450)
T 3bc8_A 241 SSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE 282 (450)
T ss_dssp CHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH
T ss_pred hhhhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCH
Confidence 43211111 222 3599999999999999976 55555654
No 134
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.56 E-value=5.7e-14 Score=137.96 Aligned_cols=208 Identities=16% Similarity=0.111 Sum_probs=129.5
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCC-CCCcceEEeCChH
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDS-DNWGVNVQPYSCT 227 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~-~~~~v~V~~~SGT 227 (403)
.+.|.|..+++. .+|.|++++...+......+ |.......++++...+.+++.+|.+. .+. ..+++++++
T Consensus 25 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~-~v~~~~g~~ 97 (376)
T 2dou_A 25 VGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYG------YCLKSCTLPFLEEAARWYEGRYGVGLDPRR-EALALIGSQ 97 (376)
T ss_dssp CCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSS------CCCHHHHHHHHHHHHHHHHHHHSCCCCTTT-SEEEESSHH
T ss_pred CCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCC------CCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-cEEEcCCcH
Confidence 345777666554 47999999987764311111 11112233343332333333348751 100 124455678
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
+|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++ +++..+|+++|++++.. ++++|++
T Consensus 98 ~a~~~~~~~l~~~gd~vl~~~p~y~~~~---------~~~~~~g--~~~~~~~~-~~~~~~d~~~l~~~l~~-~~~~v~l 164 (376)
T 2dou_A 98 EGLAHLLLALTEPEDLLLLPEVAYPSYF---------GAARVAS--LRTFLIPL-REDGLADLKAVPEGVWR-EAKVLLL 164 (376)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCHHHH---------HHHHHTT--CEEEEECB-CTTSSBCGGGSCHHHHH-HEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEECCCCcHhHH---------HHHHHcC--CEEEEeeC-CCCCCCCHHHHHHhhcc-CceEEEE
Confidence 8999999999999999999887764432 1123334 34555565 33456899999998863 5788877
Q ss_pred eCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC---C--cccEEEEcCcCCCc--CCceEEEE
Q 015647 308 GGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---D--YCDIVTSTTHKSLR--GPRGGIIF 375 (403)
Q Consensus 308 ~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~--~aDivt~StHKtL~--GP~GG~I~ 375 (403)
...+ +|...+ +++|.++|+++|+++++|++|+.+... +.....+ + ..++++.|++|+++ |.+.|+++
T Consensus 165 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 243 (376)
T 2dou_A 165 NYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYE-GEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFAL 243 (376)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS-SCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEE
T ss_pred CCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccC-CCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEe
Confidence 6433 355555 778889999999999999999875432 1111111 1 25688999999873 44568888
Q ss_pred EeCC
Q 015647 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
.+++
T Consensus 244 ~~~~ 247 (376)
T 2dou_A 244 GSEE 247 (376)
T ss_dssp ECHH
T ss_pred cCHH
Confidence 7653
No 135
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.55 E-value=3.8e-14 Score=143.18 Aligned_cols=193 Identities=12% Similarity=0.079 Sum_probs=124.3
Q ss_pred cceeccCc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015647 154 IELIASEN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 154 l~LiaSen--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
+.+.+..+ .+++++++++... .. .|.......++ +++++++++.+. .++++||++|+.
T Consensus 45 lD~~~~~~~~~~~~~~~~a~~~~-~~----------~y~~~~~~~~l----~~~la~~~~~~~-----~~~~~~gt~a~~ 104 (456)
T 2ez2_A 45 IDLLTDSGTNAMSDKQWAGMMMG-DE----------AYAGSENFYHL----ERTVQELFGFKH-----IVPTHQGRGAEN 104 (456)
T ss_dssp EECSCSSSCCCCCHHHHHHHTTC-CC----------CSSSCHHHHHH----HHHHHHHHCCSE-----EEEESSHHHHHH
T ss_pred eeeccccCCccCCHHHHHHhhcc-hh----------hcccChhHHHH----HHHHHHHhCCCc-----EEEeCCcHHHHH
Confidence 45443332 4678888887511 11 12223333333 556899999864 467788999999
Q ss_pred HHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC----C-----CCCCCHHHHHHHhccCC-
Q 015647 232 AVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP----Q-----TGYIDYEKLEEKAMDYR- 301 (403)
Q Consensus 232 aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~----~-----~g~ID~d~Le~~i~~~~- 301 (403)
+++.+++++|| ++....|. +.+. ..+...| .+++.+++++ + ++.+|+++|++++.+..
T Consensus 105 ~al~~l~~~gd--i~~~~~~~-----~~~~---~~~~~~G--~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~ 172 (456)
T 2ez2_A 105 LLSQLAIKPGQ--YVAGNMYF-----TTTR---YHQEKNG--AVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA 172 (456)
T ss_dssp HHHHHHCCTTC--EEEESSCC-----HHHH---HHHHHTT--CEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG
T ss_pred HHHHHhCCCCC--Eecccccc-----chhH---HHHHHcC--CEEEEecccccccccccccccCCCCHHHHHHHHHhccc
Confidence 99999999999 45554441 2110 1233344 3455555542 1 25789999999987532
Q ss_pred --CcEEEEe-CCC--CCcccc---HHHHHHHHHHcCCEEEEecccccc---------ccccccccC----CC-CcccEEE
Q 015647 302 --PKILICG-GSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISG---------LIAAKELAS----PF-DYCDIVT 359 (403)
Q Consensus 302 --pklViv~-~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~G---------lia~g~~~~----p~-~~aDivt 359 (403)
+++|++. .++ +|.+.+ +++|.++|+++|++|++|++|+.| +...+.... .+ ...|+++
T Consensus 173 ~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~ 252 (456)
T 2ez2_A 173 ENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCT 252 (456)
T ss_dssp GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEE
T ss_pred cceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEE
Confidence 2777766 333 466666 999999999999999999999986 222221100 01 2479998
Q ss_pred EcCcCCCcCCceEEEEEeC
Q 015647 360 STTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 360 ~StHKtL~GP~GG~I~~~~ 378 (403)
+|+||++..|+||++++++
T Consensus 253 ~S~kk~~~~~~gG~~~~~~ 271 (456)
T 2ez2_A 253 MSGKKDCLVNIGGFLCMND 271 (456)
T ss_dssp EETTTTTCCSSCEEEEESC
T ss_pred EeCcccCCCCceeEEEECC
Confidence 8999986656689998854
No 136
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.55 E-value=9.2e-14 Score=139.10 Aligned_cols=226 Identities=12% Similarity=0.071 Sum_probs=140.6
Q ss_pred CCCCChHHHHHHHHHHHhhhcccceeccCcc--CcHHHHHHHHHHhhhcC--CCCCCCCccccchHHHHHHHHHHHHHHH
Q 015647 132 LPLADPEIFDIMEKEKQRQFKGIELIASENF--VCRAVMEALGSHLTNKY--SEGYPGARYYTGNQYIDQIENLCFERAL 207 (403)
Q Consensus 132 l~~~d~ei~~li~~e~~rq~~~l~LiaSen~--~~p~V~eA~~s~l~~~y--~eG~pgsr~~~G~~~~~~lE~~arerla 207 (403)
+...++.++..+.+.. .+...|.|..+.+. .++.|++++...+.... ..+|+.. .|. .++++...+.+.
T Consensus 19 ~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~g~---~~l~~~la~~l~ 91 (429)
T 1yiz_A 19 YQGSTKSVWVEYIQLA-AQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRG---FGH---PRLVQALSKLYS 91 (429)
T ss_dssp CCCCTTCHHHHHHHHH-HHHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCS---SCC---HHHHHHHHHHHH
T ss_pred hhhCCchHHHHHHHHh-ccCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCC---CCc---HHHHHHHHHHHH
Confidence 4455566666655432 24456777666443 47999999987764310 0111111 122 233333334455
Q ss_pred HHcCC--CCC-CCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC
Q 015647 208 KAFDL--DSD-NWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ 284 (403)
Q Consensus 208 ~lfg~--~~~-~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~ 284 (403)
+.+|. +++ . .+++++|++|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++++
T Consensus 92 ~~~g~~~~~~~~---v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~---------~~~~~~g--~~~~~~~~~~~ 157 (429)
T 1yiz_A 92 QLVDRTINPMTE---VLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYE---------PMVKAAG--GIPRFIPLKPN 157 (429)
T ss_dssp HHHTSCCCTTTS---EEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH---------HHHHHTT--CEEEEEECBCC
T ss_pred HHhCCCCCCcCC---EEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHH---------HHHHHcC--CEEEEEeCCcc
Confidence 55674 332 1 244455789999999999999999999987765532 1223334 34555666543
Q ss_pred ---------CCCCCHHHHHHHhccCCCcEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccc-ccc
Q 015647 285 ---------TGYIDYEKLEEKAMDYRPKILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAK-ELA 349 (403)
Q Consensus 285 ---------~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g-~~~ 349 (403)
++.+|+++|++++. .++++|++...+ +|.+. ++++|.++|+++|++|++|++|+....... ..+
T Consensus 158 ~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~ 236 (429)
T 1yiz_A 158 KTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIR 236 (429)
T ss_dssp CSSSSEEGGGCBCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCC
T ss_pred cccccccccCcccCHHHHHHHhc-cCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcC
Confidence 34699999999986 367888766443 35566 599999999999999999999985432111 000
Q ss_pred -CCC---CcccEEEEcCcCCCc--CCceEEEEEeCC
Q 015647 350 -SPF---DYCDIVTSTTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 350 -~p~---~~aDivt~StHKtL~--GP~GG~I~~~~~ 379 (403)
..+ ...|+++.|+||+++ |.+.|+++++++
T Consensus 237 ~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~ 272 (429)
T 1yiz_A 237 ICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEA 272 (429)
T ss_dssp GGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHH
T ss_pred hhhccCCcCceEEEecchhccCCCCcceEEEEeCHH
Confidence 112 137899999999874 333488888653
No 137
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.54 E-value=6.4e-14 Score=140.49 Aligned_cols=204 Identities=15% Similarity=0.120 Sum_probs=132.4
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCh
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPYSC 226 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~SG 226 (403)
++.|.|..+.+. .+|.|++++...+.... .+++. .. .++.+..++++++.++ .+.+ ..++.++|
T Consensus 61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~-----~~---~~l~~~l~~~l~~~~g~~~~~~---~v~~~~g~ 128 (421)
T 3l8a_A 61 PELLQMWVADMDFLPVPEIKEAIINYGREHI-FGYNY-----FN---DDLYQAVIDWERKEHDYAVVKE---DILFIDGV 128 (421)
T ss_dssp TTCEECCSSCCCSCCCHHHHHHHHHHHHHCC-SSCBC-----CC---HHHHHHHHHHHHHHHCCCCCGG---GEEEESCH
T ss_pred CCeeecccCCCCCCCCHHHHHHHHHHHhcCC-cCCCC-----CC---HHHHHHHHHHHHHHhCCCCCHH---HEEEcCCH
Confidence 345666555433 37899999987765421 12211 11 3444455677888888 4443 12444567
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecC--CCCCCCCHHHHHHHhccCCCcE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVN--PQTGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd--~~~g~ID~d~Le~~i~~~~pkl 304 (403)
++|+.+++.+++++||+|++....|.+.. ..+...|. +++.++++ ..+..+|+++|++++++.++++
T Consensus 129 ~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~---------~~~~~~g~--~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~ 197 (421)
T 3l8a_A 129 VPAISIALQAFSEKGDAVLINSPVYYPFA---------RTIRLNDH--RLVENSLQIINGRFEIDFEQLEKDIIDNNVKI 197 (421)
T ss_dssp HHHHHHHHHHHSCTEEEEEEEESCCHHHH---------HHHHHTTE--EEEEEECEEETTEEECCHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCcHHHH---------HHHHHCCC--EEEeccccccCCCeeeCHHHHHHHhhccCCeE
Confidence 78999999999999999999887764432 12233343 44444443 2223689999999997557888
Q ss_pred EEEeCCC--CCcc---ccHHHHHHHHHHcCCEEEEeccccccccccccccCCC-----C--cccEEEEcCcCCCc--CCc
Q 015647 305 LICGGSS--YPRE---WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF-----D--YCDIVTSTTHKSLR--GPR 370 (403)
Q Consensus 305 Viv~~s~--~g~~---~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~-----~--~aDivt~StHKtL~--GP~ 370 (403)
|++...+ .|.+ .++++|+++|+++|++||+|++|+.... .+....++ + ..++++.|++|+|+ |.+
T Consensus 198 vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~ 276 (421)
T 3l8a_A 198 YLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLAL-FGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTK 276 (421)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC-TTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGC
T ss_pred EEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccccccc-CCCCCccHHHcCchhcCcEEEEEeChhhccCchhh
Confidence 8776543 3555 5799999999999999999999975322 22111111 1 24588999999973 445
Q ss_pred eEEEEEeC
Q 015647 371 GGIIFFRR 378 (403)
Q Consensus 371 GG~I~~~~ 378 (403)
.|++++++
T Consensus 277 ~G~~~~~~ 284 (421)
T 3l8a_A 277 NSFAIIQN 284 (421)
T ss_dssp CEEEECCS
T ss_pred eEeEEcCC
Confidence 58888874
No 138
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.54 E-value=1.8e-13 Score=137.88 Aligned_cols=201 Identities=17% Similarity=0.148 Sum_probs=130.8
Q ss_pred ccceeccC------ccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC-----CCCCCCcceE
Q 015647 153 GIELIASE------NFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD-----LDSDNWGVNV 221 (403)
Q Consensus 153 ~l~LiaSe------n~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg-----~~~~~~~v~V 221 (403)
-|.|-.+. -++++.|++++...+......+|+.. .|. .+ .|+.++++++ ++.+ -.+
T Consensus 56 ~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~---~~----lr~~la~~~~~~~~~~~~~---~v~ 122 (427)
T 3dyd_A 56 MISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPS---IGF---LS----SREEIASYYHCPEAPLEAK---DVI 122 (427)
T ss_dssp CEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCT---TCC---HH----HHHHHHHHHCBTTBCCCGG---GEE
T ss_pred EEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCC---CCc---HH----HHHHHHHHHhhcCCCCChH---HEE
Confidence 36666543 25789999999887765322222211 111 12 4566888888 4443 235
Q ss_pred EeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHhccC
Q 015647 222 QPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKAMDY 300 (403)
Q Consensus 222 ~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i~~~ 300 (403)
++++||+|+.+++.+++++||+|++....|.++.. .+...| .+++.+++++ ++..+|+++|++++++
T Consensus 123 ~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~---------~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~- 190 (427)
T 3dyd_A 123 LTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKT---------LAESMG--IEVKLYNLLPEKSWEIDLKQLEYLIDE- 190 (427)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH---------HHHHTT--CEEEEEEEEGGGTTEECHHHHHSSCCT-
T ss_pred EecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH---------HHHHcC--CEEEEEecccccCCCCCHHHHHHHhcc-
Confidence 56678999999999999999999998877654421 123334 3445555433 2457899999998875
Q ss_pred CCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCCC--ccc---EEEEcCcCCC--cC
Q 015647 301 RPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCD---IVTSTTHKSL--RG 368 (403)
Q Consensus 301 ~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aD---ivt~StHKtL--~G 368 (403)
++++|++...+ +|.+.+ +++|+++|+++|+++++|++|...... +....++. ..| +++.|++|++ .|
T Consensus 191 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~-g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G 269 (427)
T 3dyd_A 191 KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFS-DCKYEPLATLSTDVPILSCGGLAKRWLVPG 269 (427)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCS-SCCCCCGGGGCSSCCEEEEEESTTTSSCGG
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccC-CCcCccHHHhCCCCcEEEEeeccccCCCcC
Confidence 57776665433 467778 999999999999999999998753321 21111111 122 6678999975 34
Q ss_pred CceEEEEEeCC
Q 015647 369 PRGGIIFFRRG 379 (403)
Q Consensus 369 P~GG~I~~~~~ 379 (403)
.+.|++++++.
T Consensus 270 ~riG~~~~~~~ 280 (427)
T 3dyd_A 270 WRLGWILIHDR 280 (427)
T ss_dssp GCCEEEEEECS
T ss_pred cceEEEEecCc
Confidence 44588888753
No 139
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.54 E-value=1.5e-13 Score=135.53 Aligned_cols=203 Identities=14% Similarity=0.136 Sum_probs=127.9
Q ss_pred cccceeccCc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHH-HHHHHHHHHHHHcC--CCCCCCcceEEeCCh
Q 015647 152 KGIELIASEN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQ-IENLCFERALKAFD--LDSDNWGVNVQPYSC 226 (403)
Q Consensus 152 ~~l~LiaSen--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~-lE~~arerla~lfg--~~~~~~~v~V~~~SG 226 (403)
+.|.|..+.+ ..++.|++++...+... ..+|+. + ..+ +++...+.+.+.+| ++++ ..+++++|
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~~lr~~la~~l~~~~g~~~~~~---~v~~t~g~ 96 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSR-----W---KNDEFLAAIAHWFSTQHYTAIDSQ---TVVYGPSV 96 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCC-----S---CCHHHHHHHHHHHHHHSCCCCCGG---GEEEESCH
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCC-----C---ChHHHHHHHHHHHHHhcCCCCCHH---HEEEcCCH
Confidence 3456654444 24789999998776431 112221 1 122 33333334555567 4443 23445567
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC--CCCCHHHHHHHhccCCCcE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT--GYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~--g~ID~d~Le~~i~~~~pkl 304 (403)
++|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++++ ..+|+++|++++++.++++
T Consensus 97 ~~al~~~~~~l~~~gd~vl~~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~ 165 (390)
T 1d2f_A 97 IYMVSELIRQWSETGEGVVIHTPAYDAFY---------KAIEGNQ--RTVMPVALEKQADGWFCDMGKLEAVLAKPECKI 165 (390)
T ss_dssp HHHHHHHHHHSSCTTCEEEEEESCCHHHH---------HHHHHTT--CEEEEEECEECSSSEECCHHHHHHHHTSTTEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHHHH---------HHHHHCC--CEEEEeecccCCCccccCHHHHHHHhccCCCeE
Confidence 88999999999999999999887765432 1223334 345555554332 2489999999997656888
Q ss_pred EEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CCC-c-ccEEEEcCcCCCc--CCceEE
Q 015647 305 LICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD-Y-CDIVTSTTHKSLR--GPRGGI 373 (403)
Q Consensus 305 Viv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~-~-aDivt~StHKtL~--GP~GG~ 373 (403)
|++...+ +|.+++ +++|.++|+++|++|++|++|+.+......... .+. . .|. +.|++|+++ |.+.|+
T Consensus 166 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~ 244 (390)
T 1d2f_A 166 MLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAY 244 (390)
T ss_dssp EEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEE
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheE
Confidence 8765443 355655 899999999999999999999875432111111 121 1 277 999999873 445588
Q ss_pred EEEeC
Q 015647 374 IFFRR 378 (403)
Q Consensus 374 I~~~~ 378 (403)
+++++
T Consensus 245 ~~~~~ 249 (390)
T 1d2f_A 245 GIIEN 249 (390)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 88864
No 140
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.54 E-value=2.1e-13 Score=134.96 Aligned_cols=205 Identities=18% Similarity=0.121 Sum_probs=128.4
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCh
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPYSC 226 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~SG 226 (403)
.+.|.|-.+++. .++.|++++...+.... .+|+.. .|. .++.+...+.+...+|. +++ -.+++++|
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g~---~~lr~~ia~~~~~~~g~~~~~~---~i~~t~g~ 100 (385)
T 1b5p_A 31 VDLVALTAGEPDFDTPEHVKEAARRALAQGK-TKYAPP---AGI---PELREALAEKFRRENGLSVTPE---ETIVTVGG 100 (385)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TCC---HHHHHHHHHHHHHTTCCCCCGG---GEEEESHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCC---HHHHHHHHHHHHHHhCCCCChH---HEEEcCCh
Confidence 345676655553 46889999887764321 122111 122 22322223334444454 332 12444567
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHhccCCCcEE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i~~~~pklV 305 (403)
++|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ ++..+|+++|++++.+ ++|+|
T Consensus 101 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v 168 (385)
T 1b5p_A 101 SQALFNLFQAILDPGDEVIVLSPYWVSYP---------EMVRFAG--GVVVEVETLPEEGFVPDPERVRRAITP-RTKAL 168 (385)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTHHH---------HHHHHTT--CEEEEEECCGGGTTCCCHHHHHTTCCT-TEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCchhHH---------HHHHHcC--CEEEEeecCcccCCCCCHHHHHHhcCC-CCEEE
Confidence 89999999999999999999988764432 1223334 4556666654 2457999999998864 57887
Q ss_pred EEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccC--CCC-cccEEEEcCcCCCc--CCceEEEE
Q 015647 306 ICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD-YCDIVTSTTHKSLR--GPRGGIIF 375 (403)
Q Consensus 306 iv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~-~aDivt~StHKtL~--GP~GG~I~ 375 (403)
++...+ +|.++ ++++|.++|+++|++|++|++|+-.... +.... .++ ..++++.|++|+++ |-+.|+++
T Consensus 169 ~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~ 247 (385)
T 1b5p_A 169 VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYE-GEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYAC 247 (385)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSS-SCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEE
T ss_pred EEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccC-CCCCCHHHcCCCCEEEEEechhhcCCcccceEEEE
Confidence 765444 45554 4899999999999999999998764331 11111 111 24688999999874 33458998
Q ss_pred EeC
Q 015647 376 FRR 378 (403)
Q Consensus 376 ~~~ 378 (403)
.++
T Consensus 248 ~~~ 250 (385)
T 1b5p_A 248 GPK 250 (385)
T ss_dssp CCH
T ss_pred eCH
Confidence 765
No 141
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.53 E-value=2.2e-13 Score=133.10 Aligned_cols=201 Identities=12% Similarity=0.128 Sum_probs=127.6
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCh
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPYSC 226 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~SG 226 (403)
++-|.|..+++. .+|.|++++...+.... .+|+. .|. ++++...+.+.+.+| ++.+ -.+++++|
T Consensus 23 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~----~~~----~lr~~la~~~~~~~~~~~~~~---~i~~t~g~ 90 (377)
T 3fdb_A 23 QGVLPLWVAESDFSTCPAVLQAITDAVQREA-FGYQP----DGS----LLSQATAEFYADRYGYQARPE---WIFPIPDV 90 (377)
T ss_dssp TTSEECCSSCCCSCCCHHHHHHHHHHHHTTC-CSSCC----SSC----CHHHHHHHHHHHHHCCCCCGG---GEEEESCH
T ss_pred CCeeeecccCCCCCCCHHHHHHHHHHHHcCC-CCCCC----CCH----HHHHHHHHHHHHHhCCCCCHH---HEEEeCCh
Confidence 345677666654 48999999988775421 12222 122 222222223333444 4443 23455678
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEE
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
|+|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ + +|+++|++++++ ++++|+
T Consensus 91 ~~a~~~~~~~~~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~--~-~d~~~l~~~l~~-~~~~v~ 155 (377)
T 3fdb_A 91 VRGLYIAIDHFTPAQSKVIVPTPAYPPFF---------HLLSATQ--REGIFIDATG--G-INLHDVEKGFQA-GARSIL 155 (377)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEESCCTHHH---------HHHHHHT--CCEEEEECTT--S-CCHHHHHHHHHT-TCCEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHhHH---------HHHHHcC--CEEEEccCCC--C-CCHHHHHHHhcc-CCCEEE
Confidence 99999999999999999999887765542 1223334 3456666664 3 999999999986 477777
Q ss_pred EeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-----cccEEEEcCcCCC--cCCceEEE
Q 015647 307 CGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-----YCDIVTSTTHKSL--RGPRGGII 374 (403)
Q Consensus 307 v~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-----~aDivt~StHKtL--~GP~GG~I 374 (403)
+...+ +|..+ ++++|.++|+++|+++++|++|+...........++. ..++++.|++|++ .|.+.|++
T Consensus 156 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 235 (377)
T 3fdb_A 156 LCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQI 235 (377)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEE
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEE
Confidence 66444 35555 5777788899999999999999874332101111221 1448899999998 34445877
Q ss_pred EEeC
Q 015647 375 FFRR 378 (403)
Q Consensus 375 ~~~~ 378 (403)
+..+
T Consensus 236 ~~~~ 239 (377)
T 3fdb_A 236 IFSN 239 (377)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 6643
No 142
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.53 E-value=2.2e-13 Score=135.62 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=127.7
Q ss_pred ccceeccC------ccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC------------CCC
Q 015647 153 GIELIASE------NFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD------------LDS 214 (403)
Q Consensus 153 ~l~LiaSe------n~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg------------~~~ 214 (403)
.|.|..+. ...++.|++++...+......+|+.. .|. .+ .|+.++++++ ++.
T Consensus 35 ~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~~~---~~----lr~~la~~~~~~~~~~~~~~~~~~~ 104 (416)
T 1bw0_A 35 IIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPT---VGS---PE----AREAVATWWRNSFVHKEELKSTIVK 104 (416)
T ss_dssp CEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCT---TCC---HH----HHHHHHHHHHHHHCCSTTTGGGCCG
T ss_pred eEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCC---CCC---HH----HHHHHHHHHHhhhcccccCCCCCCc
Confidence 45665443 34689999999887754211122110 121 22 2445666665 444
Q ss_pred CCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHH
Q 015647 215 DNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKL 293 (403)
Q Consensus 215 ~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~L 293 (403)
+ ..+++++|++|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++++ ++.+|+++|
T Consensus 105 ~---~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~l 170 (416)
T 1bw0_A 105 D---NVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYE---------TVCKAYG--IGMHFYNCRPENDWEADLDEI 170 (416)
T ss_dssp G---GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH---------HHHHHTT--CEEEEEEEEGGGTTEECHHHH
T ss_pred c---eEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHH---------HHHHHcC--cEEEEeecCcccCCCCCHHHH
Confidence 3 1244456788999999999999999999988775532 1223334 34455555432 346899999
Q ss_pred HHHhccCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEecccccccccccc----ccCCC---C-c-ccEEE
Q 015647 294 EEKAMDYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKE----LASPF---D-Y-CDIVT 359 (403)
Q Consensus 294 e~~i~~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~----~~~p~---~-~-aDivt 359 (403)
++++++ ++++|++...+ +|...+ +++|.++|+++|++|++|++|+.... .+. ...++ + . .++++
T Consensus 171 ~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i~~ 248 (416)
T 1bw0_A 171 RRLKDD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVF-KGKDPNATFTSVADFETTVPRVIL 248 (416)
T ss_dssp HHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBC-CSSCTTCCCCCTTSSCCSCCEEEE
T ss_pred HHHhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcccccccc-CCCCCCCCccCHHHccCCCcEEEE
Confidence 999874 56776655443 466777 99999999999999999999987322 121 11112 1 1 24778
Q ss_pred EcCcCCCc--CCceEEEEEeCC
Q 015647 360 STTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 360 ~StHKtL~--GP~GG~I~~~~~ 379 (403)
.|++|++. |.+.|+++++++
T Consensus 249 ~s~sK~~~~~Glr~G~~~~~~~ 270 (416)
T 1bw0_A 249 GGTAKNLVVPGWRLGWLLYVDP 270 (416)
T ss_dssp EESTTTTSCGGGCCEEEEEECT
T ss_pred ecchhhCCCCCceEEEEEeeCc
Confidence 89999864 445689988764
No 143
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.53 E-value=1.3e-13 Score=137.24 Aligned_cols=211 Identities=11% Similarity=0.066 Sum_probs=132.0
Q ss_pred hhcccceeccCcc--CcHHHHHHHHHHhhhcC-CCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh
Q 015647 150 QFKGIELIASENF--VCRAVMEALGSHLTNKY-SEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC 226 (403)
Q Consensus 150 q~~~l~LiaSen~--~~p~V~eA~~s~l~~~y-~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG 226 (403)
+.+.|.|-.+.+. .++.|++++...+.... ..+|+.. .|. .++.+...+.+.+.+|.+...-.-.+++++|
T Consensus 27 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~---~g~---~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~ 100 (422)
T 3fvs_A 27 EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKT---FGY---PPLTKILASFFGELLGQEIDPLRNVLVTVGG 100 (422)
T ss_dssp TSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCT---TCC---HHHHHHHHHHHHHHHTCCCCHHHHEEEESHH
T ss_pred cCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCC---CCC---HHHHHHHHHHHHHhhCCCCCCCCcEEEECCh
Confidence 3456777666554 58999999988775421 1122211 122 2233333344555666432100012445567
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-----------CCCCCCHHHHHH
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-----------QTGYIDYEKLEE 295 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-----------~~g~ID~d~Le~ 295 (403)
++|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ .+..+|+++|++
T Consensus 101 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~ 169 (422)
T 3fvs_A 101 YGALFTAFQALVDEGDEVIIIEPFFDCYE---------PMTMMAG--GRPVFVSLKPGPIQNGELGSSSNWQLDPMELAG 169 (422)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHH---------HHHHHTT--CEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHT
T ss_pred HHHHHHHHHHHcCCCCEEEEcCCCchhhH---------HHHHHcC--CEEEEEecccccccccccccccCCCCCHHHHHh
Confidence 89999999999999999999887765432 1223334 3455555553 134689999999
Q ss_pred HhccCCCcEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCCC---C---cccEEEEcCcC
Q 015647 296 KAMDYRPKILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---D---YCDIVTSTTHK 364 (403)
Q Consensus 296 ~i~~~~pklViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~---~aDivt~StHK 364 (403)
++++ ++++|++...+ +|..+ ++++|.++|+++|+++++|.+|+..... +....++ . ..++++.|++|
T Consensus 170 ~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK 247 (422)
T 3fvs_A 170 KFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYD-GHQHISIASLPGMWERTLTIGSAGK 247 (422)
T ss_dssp TCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT-TCCCCCGGGSTTTGGGEEEEEEHHH
T ss_pred hcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccC-CCCCCChhhcccccCcEEEEecchh
Confidence 8874 67888776444 45666 6999999999999999999999763322 2111111 1 24588899999
Q ss_pred CCc--CCceEEEEEeCC
Q 015647 365 SLR--GPRGGIIFFRRG 379 (403)
Q Consensus 365 tL~--GP~GG~I~~~~~ 379 (403)
+++ |.+.|+++.+++
T Consensus 248 ~~g~~G~r~G~~~~~~~ 264 (422)
T 3fvs_A 248 TFSATGWKVGWVLGPDH 264 (422)
T ss_dssp HHTCGGGCCEEEECCHH
T ss_pred ccCCccceEEEEEeCHH
Confidence 873 445588887653
No 144
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.52 E-value=1.9e-13 Score=133.71 Aligned_cols=195 Identities=16% Similarity=0.121 Sum_probs=126.7
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcC--CCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKY--SEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y--~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
.-|.|..+++. .++.|++++...+.... ..+|+.. + ..+ .|+++++++|++.+ -.+++++|+
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~----~---~~~----lr~~la~~~g~~~~---~i~~t~g~~ 92 (360)
T 3hdo_A 27 SWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA----S---SQK----LREVAGELYGFDPS---WIIMANGSD 92 (360)
T ss_dssp TSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS----S---CHH----HHHHHHHHHTCCGG---GEEEESSHH
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC----c---hHH----HHHHHHHHhCcCcc---eEEEcCCHH
Confidence 44666666665 47899999988775420 1123321 1 122 45678999998764 234556789
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
+|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++. .+.+ +++ ++..++|+|++
T Consensus 93 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~---------~~~~~~g--~~~~~v~~~~-~~~~--~~l---~~~~~~~~v~i 155 (360)
T 3hdo_A 93 EVLNNLIRAFAAEGEEIGYVHPSYSYYG---------TLAEVQG--ARVRTFGLTG-DFRI--AGF---PERYEGKVFFL 155 (360)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHH---------HHHHHHT--CEEEEECBCT-TSSB--TTC---CSSBCSSEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEcCCChHHHH---------HHHHHCC--CEEEEeeCCC-CCCH--HHH---HhhcCCCEEEE
Confidence 9999999999999999999987765432 1223334 4556666653 3334 333 33345788777
Q ss_pred eCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccC-CCCcccEEEEcCcCCC--cCCceEEEEEeC
Q 015647 308 GGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS-PFDYCDIVTSTTHKSL--RGPRGGIIFFRR 378 (403)
Q Consensus 308 ~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~-p~~~aDivt~StHKtL--~GP~GG~I~~~~ 378 (403)
...+ +|.++|+++|.+||+++|+++++|++|+.. ...+.... .....++++.|++|++ .|.+.|++++++
T Consensus 156 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 230 (360)
T 3hdo_A 156 TTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEF-AESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP 230 (360)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGG-SSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhh-CCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCH
Confidence 6443 578999999999999999999999998852 11111000 0012458889999996 345568888754
No 145
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.50 E-value=2.1e-13 Score=136.19 Aligned_cols=205 Identities=15% Similarity=0.137 Sum_probs=129.5
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC---CCCCcceEEeCChH
Q 015647 153 GIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD---SDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~---~~~~~v~V~~~SGT 227 (403)
.|.|..+.+. .++.|++++...+......+|+.. .|. .++++...+.+++.+|.+ .+ ..+++++++
T Consensus 49 ~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~---~~lr~~ia~~~~~~~g~~~~~~~---~v~~t~G~~ 119 (404)
T 2o1b_A 49 LINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAF---HGK---EAFKQAIVDFYQRQYNVTLDKED---EVCILYGTK 119 (404)
T ss_dssp CEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCT---TCC---HHHHHHHHHHHHHHHCCCCCTTT---SEEEESSHH
T ss_pred EEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCC---CCC---HHHHHHHHHHHHHHhCCCCCCcc---cEEEcCCcH
Confidence 4677666554 378999998876632100112111 121 233333233344444875 12 134455678
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
+|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++++..+|+++|++++.. ++++|++
T Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~l 187 (404)
T 2o1b_A 120 NGLVAVPTCVINPGDYVLLPDPGYTDYL---------AGVLLAD--GKPVPLNLEPPHYLPDWSKVDSQIID-KTKLIYL 187 (404)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCSSHH---------HHHHHTT--CEEEEEECCTTTCCCCGGGSCHHHHH-HEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCchhHH---------HHHHHCC--CEEEEeccCcccCcCCHHHHHHhhcc-CceEEEE
Confidence 8999999999999999999987765542 1123334 35566666543345899999998863 5788877
Q ss_pred eCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccC--CCC---cccEEEEcCcCCCc--CCceEEEE
Q 015647 308 GGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD---YCDIVTSTTHKSLR--GPRGGIIF 375 (403)
Q Consensus 308 ~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~---~aDivt~StHKtL~--GP~GG~I~ 375 (403)
...+ +|... ++++|.++|+++|+++++|++|+.+... +.... .+. ..++++.|+||+|+ |.+.|+++
T Consensus 188 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 266 (404)
T 2o1b_A 188 TYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFD-AKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAV 266 (404)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSS-SCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEE
T ss_pred cCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccC-CCCCChhhcCCCCCCEEEEEecchhccCchhheEeEe
Confidence 6433 45565 4788999999999999999999875432 11111 121 25789999999983 44558888
Q ss_pred EeCC
Q 015647 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
++++
T Consensus 267 ~~~~ 270 (404)
T 2o1b_A 267 GNKD 270 (404)
T ss_dssp ECHH
T ss_pred cCHH
Confidence 7653
No 146
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.50 E-value=1.4e-13 Score=139.31 Aligned_cols=161 Identities=16% Similarity=0.170 Sum_probs=106.2
Q ss_pred HHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc----CCCe---EEecCCCCCccccccccCCccchhhhcccceE
Q 015647 203 FERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL----PGDR---IMGLDSPSGGHLSHGYHTPGGKKVSAASIFFE 275 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~----pGD~---VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~ 275 (403)
+++++++++.+. .++++|||+||.+++.++++ +||+ |++. ..|.+... ..+...|. .
T Consensus 82 ~~~la~~~~~~~-----v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~-~~~~~~~~--------~~~~~~g~--~ 145 (467)
T 1ax4_A 82 KDKAKELFNYDY-----IIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFIS-NFHFDTTA--------AHVELNGC--K 145 (467)
T ss_dssp HHHHHHHHCCCE-----EEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEE-SSCCHHHH--------HHHHHTTC--E
T ss_pred HHHHHHHcCCCc-----EEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEe-ccccchhh--------HHHhccCC--c
Confidence 556889999754 35566799999999999988 9998 8887 44321110 11233332 2
Q ss_pred Eeeeec----C-----CCCCCCCHHHHHHHhccC---CCcEEEEeCCC--C-Ccc---ccHHHHHHHHHHcCCEEEEecc
Q 015647 276 SFPYKV----N-----PQTGYIDYEKLEEKAMDY---RPKILICGGSS--Y-PRE---WDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 276 vv~~~v----d-----~~~g~ID~d~Le~~i~~~---~pklViv~~s~--~-g~~---~Di~~I~~Iake~Ga~LivDaA 337 (403)
++.... + +.++.+|+++|++++++. ++++|++...+ . |.+ .++++|+++|+++|++||+|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~ 225 (467)
T 1ax4_A 146 AINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSA 225 (467)
T ss_dssp EEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECT
T ss_pred eecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEch
Confidence 222111 1 114579999999999752 47888876543 3 444 3578999999999999999999
Q ss_pred ccc-ccc-------c-cccccCCC-----CcccEEEEcCcCCCcCCceEEEEEeCC
Q 015647 338 HIS-GLI-------A-AKELASPF-----DYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 338 h~~-Gli-------a-~g~~~~p~-----~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
|.. |.. . .+.....+ ..+|++++|+||+++.|.||+++.++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~Gg~~~~~d~ 281 (467)
T 1ax4_A 226 RFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDN 281 (467)
T ss_dssp THHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSCEEEEESSC
T ss_pred hhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcceEEEeCCH
Confidence 886 332 1 11100011 247899999999986666888887733
No 147
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.50 E-value=5.7e-14 Score=142.12 Aligned_cols=190 Identities=15% Similarity=0.167 Sum_probs=117.7
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccC----
Q 015647 165 RAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLP---- 240 (403)
Q Consensus 165 p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~p---- 240 (403)
++|++++...+.. |. ..|.......++ +++++++++.+. .++++|||+||.+++.+++++
T Consensus 53 ~~v~~a~~~~l~~----~~---~~y~~~~~~~~l----~~~la~~~~~~~-----v~~t~~gt~A~~~al~~~~~~~~~~ 116 (467)
T 2oqx_A 53 GAVTQSMQAAMMR----GD---EAYSGSRSYYAL----AESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQE 116 (467)
T ss_dssp SCCCHHHHHHTTS----CC---CCSSSCHHHHHH----HHHHHHHHCCSE-----EEEEC--CCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc----Cc---ceeccCchhHHH----HHHHHHHhCcCc-----EEEcCCcHHHHHHHHHHHhcccccc
Confidence 7778777665532 11 123333333344 456899998754 356678999999999999888
Q ss_pred -C----CeEEecCCCCCccccccccCCccchhhhcccce-E---EeeeecC---CCCCCCCHHHHHHHhcc---CCCcEE
Q 015647 241 -G----DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFF-E---SFPYKVN---PQTGYIDYEKLEEKAMD---YRPKIL 305 (403)
Q Consensus 241 -G----D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~-~---vv~~~vd---~~~g~ID~d~Le~~i~~---~~pklV 305 (403)
| |+|++. ..|+.... . .....+... . ...++++ +.++.+|+++|++++++ .++++|
T Consensus 117 ~G~~~~d~Ii~~-~~h~~t~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~v 187 (467)
T 2oqx_A 117 KGLDRSKMVAFS-NYFFDTTQ-G-------HSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYI 187 (467)
T ss_dssp HCCCTTTCEEEE-SSCCHHHH-H-------HHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCE
T ss_pred CCCCccceEEec-ccccccch-h-------hhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEE
Confidence 9 998775 34422100 0 011111110 0 0111111 13467999999999975 357888
Q ss_pred EEeCCCC---Ccc---ccHHHHHHHHHHcCCEEEEeccccc-ccc--------ccccccCCC-----CcccEEEEcCcCC
Q 015647 306 ICGGSSY---PRE---WDYGRFRQIADKCGAVLMCDMAHIS-GLI--------AAKELASPF-----DYCDIVTSTTHKS 365 (403)
Q Consensus 306 iv~~s~~---g~~---~Di~~I~~Iake~Ga~LivDaAh~~-Gli--------a~g~~~~p~-----~~aDivt~StHKt 365 (403)
++...++ |.+ .++++|+++|+++|++||+|++|+. +.. ..+.....+ ..+|++++|+||+
T Consensus 188 i~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~ 267 (467)
T 2oqx_A 188 VATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKD 267 (467)
T ss_dssp EEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSST
T ss_pred EEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccc
Confidence 7765432 443 3588999999999999999999987 442 112111111 2478899999999
Q ss_pred CcCCceEEEEEeCC
Q 015647 366 LRGPRGGIIFFRRG 379 (403)
Q Consensus 366 L~GP~GG~I~~~~~ 379 (403)
++.|.||+++++++
T Consensus 268 ~g~~~Gg~~~~~~~ 281 (467)
T 2oqx_A 268 AMVPMGGLLCMKDD 281 (467)
T ss_dssp TCCSSCEEEEECSG
T ss_pred cCCCCceEEEecCh
Confidence 97777888888765
No 148
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.50 E-value=1.1e-13 Score=135.54 Aligned_cols=159 Identities=18% Similarity=0.172 Sum_probs=110.8
Q ss_pred HHHHHHHc-CCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015647 203 FERALKAF-DLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 203 rerla~lf-g~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
++.+++++ +++++ -.++++|||+|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++
T Consensus 69 ~~~la~~~~~~~~~---~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~ 134 (375)
T 3op7_A 69 KKSVSQLYTGVKPE---QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLY---------DIPKSLG--AEVDLWQI 134 (375)
T ss_dssp HHHHHTTSSSCCGG---GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHH---------HHHHHTT--CEEEEEEE
T ss_pred HHHHHHHhccCChh---hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHH---------HHHHHcC--CEEEEEec
Confidence 44678877 45543 2345566899999999999999999999987765532 1223334 34555555
Q ss_pred CCC-CCCCCHHHHHHHhccCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC--C
Q 015647 282 NPQ-TGYIDYEKLEEKAMDYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF--D 353 (403)
Q Consensus 282 d~~-~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~--~ 353 (403)
+++ +..+|+++|++++++ ++++|++...+ +|...| +++|.++|+++|+++++|++|..+... + .+... .
T Consensus 135 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~-~-~~~~~~~~ 211 (375)
T 3op7_A 135 EEENGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL-D-VPSIIEVY 211 (375)
T ss_dssp EGGGTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS-C-CCCHHHHC
T ss_pred cccCCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc-C-CCchhhhc
Confidence 432 345899999999974 68888776443 467788 999999999999999999998864321 1 11111 1
Q ss_pred cccEEEEcCcCCCc--CCceEEEEEeC
Q 015647 354 YCDIVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 354 ~aDivt~StHKtL~--GP~GG~I~~~~ 378 (403)
..++++.|++|+++ |.++|++++++
T Consensus 212 ~~~i~~~s~sK~~~~~G~r~G~v~~~~ 238 (375)
T 3op7_A 212 DKGIAVNSLSKTYSLPGIRIGWVAANH 238 (375)
T ss_dssp TTEEEEEESSSSSSCGGGCCEEEECCH
T ss_pred CCEEEEeEChhhcCCcccceEEEEeCH
Confidence 24588999999984 44568888854
No 149
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.49 E-value=2e-14 Score=139.67 Aligned_cols=195 Identities=13% Similarity=0.141 Sum_probs=127.5
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCcccc----chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-Ch-
Q 015647 153 GIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYT----GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY-SC- 226 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~----G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~-SG- 226 (403)
.+.+.+++..+++.|++++...+.. + .+++...|. .....+.++ .+++++++++|++..+ .|+++ ++
T Consensus 4 ~~~~~~g~~~~p~~v~~a~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~-~l~~~la~~~g~~~~~---~v~~~~g~g 76 (360)
T 1w23_A 4 VFNFNAGPSALPKPALERAQKELLN-F--NDTQMSVMELSHRSQSYEEVHE-QAQNLLRELLQIPNDY---QILFLQGGA 76 (360)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSS-S--TTSSSCGGGSCTTSHHHHHHHH-HHHHHHHHHHTCCTTE---EEEEESSHH
T ss_pred eEeecCCCcCCCHHHHHHHHHHhhh-h--ccccccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc---eEEEECCcc
Confidence 4677888889999999999877643 2 233332221 222333333 4688899999997321 34444 45
Q ss_pred HHHHHHHHhhhccC---CCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHH-HhccCCC
Q 015647 227 TSANFAVYTGLLLP---GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEE-KAMDYRP 302 (403)
Q Consensus 227 T~An~aal~all~p---GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~-~i~~~~p 302 (403)
|+|+.+++.+++.+ ||.|++.... |.+. ..+...| +++.++++++++.+|+++|++ ++. .++
T Consensus 77 t~al~~~~~~l~~~~~~g~~vi~~~~~------~~~~----~~~~~~g---~~~~v~~~~~~~~~d~~~l~~~~i~-~~~ 142 (360)
T 1w23_A 77 SLQFTMLPMNLLTKGTIGNYVLTGSWS------EKAL----KEAKLLG---ETHIAASTKANSYQSIPDFSEFQLN-END 142 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSHHH------HHHH----HHHHTTS---EEEEEEECGGGTSCSCCCGGGCCCC-TTE
T ss_pred hHHHHHHHHHhcCCCCcccEEEecchh------HHHH----HHHHHhC---CeEEeecccccCcCCccchHhhccC-CCC
Confidence 89999999999865 5556655433 2110 1122233 455666654356789999988 774 468
Q ss_pred cEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 303 KILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 303 klViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
|+|++... .+|.++| +|++++|++|++|++|+.|..+. ++...|++++|+||++ ||.| |+++++++
T Consensus 143 k~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~-----~~~~~di~~~s~sK~~-~~~G~G~~~~~~~ 211 (360)
T 1w23_A 143 AYLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPL-----KVNQFGMIYAGAQKNL-GPSGVTVVIVKKD 211 (360)
T ss_dssp EEEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCC-----CGGGCSEEEEETTTTT-SCTTCEEEEEEHH
T ss_pred CEEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCc-----CcccCCEEEEEccccc-CCCCcEEEEEcHH
Confidence 88877643 3566666 33448999999999999876432 2322489999999987 5777 88888764
No 150
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.49 E-value=5.4e-13 Score=132.13 Aligned_cols=204 Identities=19% Similarity=0.106 Sum_probs=125.3
Q ss_pred cccceeccCc----cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeC-
Q 015647 152 KGIELIASEN----FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPY- 224 (403)
Q Consensus 152 ~~l~LiaSen----~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~- 224 (403)
..|.|..+.. +.++.+.+++...+..... ... |.......++++...+.+.+.+| ++++ .|+++
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~----~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~----~v~~t~ 105 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEPK----SVM-YTPANGIPELREELAAFLKKYDHLEVSPE----NIVITI 105 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGG----GGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGG----GEEEES
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhhccc----ccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcc----eEEEec
Confidence 4466644321 2467899988877654210 000 11111123344332333334448 3443 35555
Q ss_pred ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhc----c-
Q 015647 225 SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAM----D- 299 (403)
Q Consensus 225 SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~----~- 299 (403)
+||+|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ .+ +|+++|+++++ +
T Consensus 106 g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~---------~~~~~~g--~~~~~v~~~~-~~-~d~~~l~~~l~~~~~~~ 172 (407)
T 2zc0_A 106 GGTGALDLLGRVLIDPGDVVITENPSYINTL---------LAFEQLG--AKIEGVPVDN-DG-MRVDLLEEKIKELKAKG 172 (407)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCHHHH---------HHHHTTT--CEEEEEEEET-TE-ECHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCChHHHH---------HHHHHcC--CEEEEcccCC-CC-CCHHHHHHHHHhhhccc
Confidence 5689999999999999999999887664432 1223334 3455566654 34 99999999987 4
Q ss_pred CCCcEEE-EeCCC--CCccccHH---HHHHHHHHcCCEEEEeccccccccccccccC--CCC--cccEEEEcCcCCCcCC
Q 015647 300 YRPKILI-CGGSS--YPREWDYG---RFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD--YCDIVTSTTHKSLRGP 369 (403)
Q Consensus 300 ~~pklVi-v~~s~--~g~~~Di~---~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~--~aDivt~StHKtL~GP 369 (403)
.++++|+ +...+ +|.+.|.+ +|.++|+++|+++++|++|+.+......... .++ ..++++.|++|+++ |
T Consensus 173 ~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~ 251 (407)
T 2zc0_A 173 QKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-T 251 (407)
T ss_dssp CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-T
T ss_pred CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-C
Confidence 3678774 43322 56777776 8999999999999999999876432111111 111 24578889999986 4
Q ss_pred --ceEEEEEeC
Q 015647 370 --RGGIIFFRR 378 (403)
Q Consensus 370 --~GG~I~~~~ 378 (403)
++|++++++
T Consensus 252 G~r~G~~~~~~ 262 (407)
T 2zc0_A 252 GFRIGWIIAEG 262 (407)
T ss_dssp TSCCEEEECCH
T ss_pred CcceEEEecCH
Confidence 568988864
No 151
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.48 E-value=1.7e-12 Score=126.12 Aligned_cols=194 Identities=12% Similarity=0.062 Sum_probs=126.2
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHH
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTS 228 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~ 228 (403)
++-|.|..++++ +++.|++++...+...+ +++.. + ..+ .|++++++++++++ ..+++++||+
T Consensus 26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~----~---~~~----l~~~la~~~~~~~~---~i~~~~g~t~ 89 (361)
T 3ftb_A 26 RELLDYSSNINPLGIPKSFLNNIDEGIKNLG--VYPDV----N---YRR----LNKSIENYLKLKDI---GIVLGNGASE 89 (361)
T ss_dssp --CEETTCCCCTTCSCHHHHTTHHHHHHGGG--SCCCT----T---CHH----HHHHHHHHHTCCSC---EEEEESSHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHHhc--CCCCc----c---HHH----HHHHHHHHhCCCcc---eEEEcCCHHH
Confidence 345777666665 47999999887765422 23321 1 122 46678999998764 2344567889
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015647 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
|+.+++.++ |+|++....|.+.. ..+...| .+++.+++++ .+.+|+++|++++++ +++|++.
T Consensus 90 al~~~~~~~----d~vi~~~~~~~~~~---------~~~~~~g--~~~~~~~~~~-~~~~~~~~l~~~l~~--~~~v~i~ 151 (361)
T 3ftb_A 90 IIELSISLF----EKILIIVPSYAEYE---------INAKKHG--VSVVFSYLDE-NMCIDYEDIISKIDD--VDSVIIG 151 (361)
T ss_dssp HHHHHHTTC----SEEEEEESCCTHHH---------HHHHHTT--CEEEEEECCT-TSCCCHHHHHHHTTT--CSEEEEE
T ss_pred HHHHHHHHc----CcEEEecCChHHHH---------HHHHHcC--CeEEEeecCc-ccCCCHHHHHHhccC--CCEEEEe
Confidence 999999887 99999887764432 1223333 4566667664 457899999999976 8888776
Q ss_pred CCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccc--cccccCCCC-cccEEEEcCcCCCc--CCceEEEEEeC
Q 015647 309 GSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIA--AKELASPFD-YCDIVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 309 ~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia--~g~~~~p~~-~aDivt~StHKtL~--GP~GG~I~~~~ 378 (403)
..+ +|.++ ++++|+++|+++|+++++|++|+.+... .......-. ...+++.|++|+++ |.+.|++++.+
T Consensus 152 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~ 231 (361)
T 3ftb_A 152 NPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN 231 (361)
T ss_dssp TTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC
Confidence 544 45555 4677888888999999999999754432 010111001 23477889999873 33458887443
No 152
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.48 E-value=2.2e-13 Score=134.82 Aligned_cols=207 Identities=14% Similarity=0.021 Sum_probs=127.4
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CC-CCCcceEEeCC
Q 015647 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DS-DNWGVNVQPYS 225 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~-~~~~v~V~~~S 225 (403)
.+.|.|-.+++. .++.|++++...+......+|+.. .|. .++++...+.+.+.+|. ++ + ..+++++
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~---~~l~~~la~~~~~~~~~~~~~~~---~i~~~~g 93 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG---FGH---PALVKALSCLYGKIYQRQIDPNE---EILVAVG 93 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCT---TCC---HHHHHHHHHHHHHHHTSCCCTTT---SEEEESH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCC---CCh---HHHHHHHHHHHHHHhCCCCCCCC---CEEEeCC
Confidence 345666655443 589999999877653211122221 111 22333223334444443 33 2 1244455
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC----------CCCCCCHHHHHH
Q 015647 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP----------QTGYIDYEKLEE 295 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~----------~~g~ID~d~Le~ 295 (403)
|++|+.+++.+++++||+|++....|.+.. ..+...|. +++.+++++ .++.+|++++++
T Consensus 94 ~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~---------~~~~~~g~--~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~ 162 (410)
T 3e2y_A 94 AYGSLFNSIQGLVDPGDEVIIMVPFYDCYE---------PMVRMAGA--VPVFIPLRSKPTDGMKWTSSDWTFDPRELES 162 (410)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTTHH---------HHHHHTTC--EEEEEECEECCCCSSCCBGGGEECCHHHHHT
T ss_pred cHHHHHHHHHHhcCCCCEEEEeCCCchhhH---------HHHHHcCC--EEEEEeccccccccccccccCCcCCHHHHHh
Confidence 789999999999999999999887765432 12233343 344444431 234589999999
Q ss_pred HhccCCCcEEEEeCCCC--Ccc---ccHHHHHHHHHHcCCEEEEeccccccccccccccCCC---C---cccEEEEcCcC
Q 015647 296 KAMDYRPKILICGGSSY--PRE---WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---D---YCDIVTSTTHK 364 (403)
Q Consensus 296 ~i~~~~pklViv~~s~~--g~~---~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~---~aDivt~StHK 364 (403)
++++ ++++|++...++ |.. .++++|.++|+++|+++++|.+|+..... +....++ . ..++++.|++|
T Consensus 163 ~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK 240 (410)
T 3e2y_A 163 KFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYT-GHTHVKIATLPGMWERTITIGSAGK 240 (410)
T ss_dssp TCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT-TCCCCCGGGSTTCGGGEEEEEEHHH
T ss_pred hcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccC-CCCCCCHHHcCCccCeEEEEecchh
Confidence 8864 678887765443 445 47999999999999999999999753322 2111111 1 24488899999
Q ss_pred CCc--CCceEEEEEeCC
Q 015647 365 SLR--GPRGGIIFFRRG 379 (403)
Q Consensus 365 tL~--GP~GG~I~~~~~ 379 (403)
+++ |.+.|+++.+++
T Consensus 241 ~~g~~G~r~G~~~~~~~ 257 (410)
T 3e2y_A 241 TFSVTGWKLGWSIGPAH 257 (410)
T ss_dssp HSSCGGGCCEEEECCHH
T ss_pred hcCCCCceEEEEEECHH
Confidence 873 445588887653
No 153
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.47 E-value=6.4e-13 Score=130.92 Aligned_cols=204 Identities=15% Similarity=0.119 Sum_probs=129.3
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC---CC-CCcceEEeCC
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD---SD-NWGVNVQPYS 225 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~---~~-~~~v~V~~~S 225 (403)
+.|.|..+++. .++.|++++...+...+ +|+.. .|. .++.+...+.+++.+|.+ ++ . .+++++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~---~g~---~~lr~~la~~l~~~~g~~~~~~~~~---i~~t~g 99 (396)
T 3jtx_A 31 EAVPLHIGEPKHPTPKVITDALTASLHELE--KYPLT---AGL---PELRQACANWLKRRYDGLTVDADNE---ILPVLG 99 (396)
T ss_dssp CCEECSCCSCCSCCCHHHHHHHHHTGGGGG--SCCCT---TCC---HHHHHHHHHHHHHHTTTCCCCTTTS---EEEESS
T ss_pred CeEEeCCcCCCCCCCHHHHHHHHHHhhhcc--CCCCC---CCc---HHHHHHHHHHHHHhcCCCCCCCCCe---EEEcCC
Confidence 45777666544 47899999987664322 23221 122 233333344566667853 42 1 244557
Q ss_pred hHHHHHHHHhhhccCC-----CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC
Q 015647 226 CTSANFAVYTGLLLPG-----DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY 300 (403)
Q Consensus 226 GT~An~aal~all~pG-----D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~ 300 (403)
+++|+.+++.+++++| |+|++....|.+.. ..+...| .+++.++++.++..+|+++|++++.+
T Consensus 100 ~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~---------~~~~~~g--~~~~~v~~~~~g~~~d~~~l~~~~~~- 167 (396)
T 3jtx_A 100 SREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYE---------GATLLGG--GEIHFANCPAPSFNPDWRSISEEVWK- 167 (396)
T ss_dssp HHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHH---------HHHHHTT--CEEEEEECCTTTCCCCGGGSCHHHHH-
T ss_pred cHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHH---------HHHHHcC--CEEEEeecCCCCCccCHHHHHHhhcc-
Confidence 8889999999999997 79999887664432 1123334 45566666544556899999998875
Q ss_pred CCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC----------CcccEEEEcCcCC
Q 015647 301 RPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF----------DYCDIVTSTTHKS 365 (403)
Q Consensus 301 ~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~----------~~aDivt~StHKt 365 (403)
++++|++...+ +|.+++ +++|.++|+++|+++++|.+|...... +..+..+ ...++++.|++|+
T Consensus 168 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 246 (396)
T 3jtx_A 168 RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFD-GNKPLGCLQAAAQLGRSRQKLLMFTSLSKR 246 (396)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCST-TCCCCCHHHHHHHTTCCCTTEEEEEESTTT
T ss_pred CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCchHHhhhhhcccccCcEEEEeccccc
Confidence 68888775444 456665 555889999999999999998864322 1111110 1367889999997
Q ss_pred C--cCCceEEEEEeCC
Q 015647 366 L--RGPRGGIIFFRRG 379 (403)
Q Consensus 366 L--~GP~GG~I~~~~~ 379 (403)
+ .|.+.|+++.+++
T Consensus 247 ~~~~G~r~G~~~~~~~ 262 (396)
T 3jtx_A 247 SNVPGLRSGFVAGDAE 262 (396)
T ss_dssp SSCGGGCCEEEEECHH
T ss_pred cCCcccceEEEEeCHH
Confidence 5 3445588887653
No 154
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.46 E-value=2.7e-13 Score=136.30 Aligned_cols=168 Identities=17% Similarity=0.118 Sum_probs=105.7
Q ss_pred HHHHHHHc------CCCCCCCcceEEeCChHHHHHHHHhhhccCCC--------------eEEec-CCCCCccccccccC
Q 015647 203 FERALKAF------DLDSDNWGVNVQPYSCTSANFAVYTGLLLPGD--------------RIMGL-DSPSGGHLSHGYHT 261 (403)
Q Consensus 203 rerla~lf------g~~~~~~~v~V~~~SGT~An~aal~all~pGD--------------~VL~~-~~ehgghlsh~~~~ 261 (403)
|+.+++++ +++++ -.+++++||+|+++++.+++++|| +|+++ ...|.++.... .
T Consensus 89 r~~ia~~l~~~~g~~~~~~---~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~--~ 163 (444)
T 3if2_A 89 IDALVGFFNRHYDWNLTSE---NIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVH--V 163 (444)
T ss_dssp HHHHHHHHHHHHCCCCCGG---GEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCC--S
T ss_pred HHHHHHHHHhhcCCCCCHH---HEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcc--c
Confidence 44455555 44543 134455788999999999999998 78775 66665553211 0
Q ss_pred CccchhhhcccceEEeeeecCCCCC----CCCHHHHHHHhc--cCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCC
Q 015647 262 PGGKKVSAASIFFESFPYKVNPQTG----YIDYEKLEEKAM--DYRPKILICGGSS--YPREWD---YGRFRQIADKCGA 330 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g----~ID~d~Le~~i~--~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga 330 (403)
.+ . .+.+..+.+++++++++++ .+|+++|+++++ ..++++|++...+ +|.+++ +++|.++|+++|+
T Consensus 164 ~~-~--~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~ 240 (444)
T 3if2_A 164 EG-Q--HFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDI 240 (444)
T ss_dssp SS-C--CEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred cc-c--hhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCC
Confidence 00 0 1122334566666664222 699999998742 2357887775433 467777 8888999999999
Q ss_pred EEEEeccccccccccccccC-C-CCcccEEEEcCcCCC-cCCceEEEEEeC
Q 015647 331 VLMCDMAHISGLIAAKELAS-P-FDYCDIVTSTTHKSL-RGPRGGIIFFRR 378 (403)
Q Consensus 331 ~LivDaAh~~Glia~g~~~~-p-~~~aDivt~StHKtL-~GP~GG~I~~~~ 378 (403)
+||+|++|+.+......... + ....++++.|+||++ .|.+.|+++.++
T Consensus 241 ~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 291 (444)
T 3if2_A 241 PLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADA 291 (444)
T ss_dssp CEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCH
T ss_pred EEEEECCCCCcccccccccccccCCCCEEEEechhhccCCCCceEEEEECH
Confidence 99999999753221111111 1 123679999999963 233448887654
No 155
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.46 E-value=6.8e-13 Score=133.36 Aligned_cols=148 Identities=20% Similarity=0.126 Sum_probs=101.3
Q ss_pred EEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhh-hcccceEEeeeecCCCC-CCCCHHHHHHHhc
Q 015647 221 VQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVS-AASIFFESFPYKVNPQT-GYIDYEKLEEKAM 298 (403)
Q Consensus 221 V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~-~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i~ 298 (403)
+++++|++||.+++.+++++||+|++....|.++.. .+. ..| .+++++++++++ ..+|+++|+++++
T Consensus 115 ~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~ 183 (435)
T 3piu_A 115 VLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR---------DLKWRTG--VEIVPIHCTSSNGFQITETALEEAYQ 183 (435)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH---------HTTTTTC--CEEEEEECCGGGTSCCCHHHHHHHHH
T ss_pred EEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH---------HHHHhcC--CEEEEeeCCCccCCcCCHHHHHHHHH
Confidence 445578899999999999999999999887755431 112 233 455666665422 3589999999987
Q ss_pred c-----CCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC--------------Cc
Q 015647 299 D-----YRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF--------------DY 354 (403)
Q Consensus 299 ~-----~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~--------------~~ 354 (403)
+ .++++|++...+ +|.+.+ +++|.++|+++|++|++|.+|+.+........... ..
T Consensus 184 ~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 263 (435)
T 3piu_A 184 EAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQ 263 (435)
T ss_dssp HHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGG
T ss_pred HHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCC
Confidence 5 267877766443 455544 58888899999999999999976543321111100 01
Q ss_pred ccEEEEcCcCCC--cCCceEEEEEeCC
Q 015647 355 CDIVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 355 aDivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
..+++.|+||+| .|.+.|+++++++
T Consensus 264 ~~i~i~s~sK~~g~~G~r~G~~~~~~~ 290 (435)
T 3piu_A 264 RVHVVYSLSKDLGLPGFRVGAIYSNDD 290 (435)
T ss_dssp GEEEEEESSSSSCCGGGCEEEEEESCH
T ss_pred CEEEEEeeecccCCCceeEEEEEeCCH
Confidence 228889999998 3455699988543
No 156
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.46 E-value=1.4e-12 Score=128.77 Aligned_cols=185 Identities=14% Similarity=0.040 Sum_probs=118.5
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccC--
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLP-- 240 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~p-- 240 (403)
.+|.|.+++...+.. +. +.+..+ ..+...++ ++++++++|.+. .++++|||+||.+++..+..+
T Consensus 53 ~~p~v~~a~~~~~~~-~~--~~~~~~--~~~~~~~l----~~~la~~~g~~~-----v~~~~~gt~a~~~al~~~~~~~~ 118 (392)
T 3ruy_A 53 RHPKIINALIDQANR-VT--LTSRAF--HSDQLGPW----YEKVAKLTNKEM-----VLPMNTGAEAVETAIKTARRWAY 118 (392)
T ss_dssp TCHHHHHHHHHHHTT-CS--CCCTTS--EETTHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cc--cccccc--CCHHHHHH----HHHHHHhcCCCE-----EEEeCcHHHHHHHHHHHHHHhhh
Confidence 478899988876643 21 211112 12333333 456889998543 466778999999999877644
Q ss_pred --------CCeEEecCCCCCccccccccCCccchhhhccc----------ceEEeeeecCCCCCCCCHHHHHHHhccCCC
Q 015647 241 --------GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI----------FFESFPYKVNPQTGYIDYEKLEEKAMDYRP 302 (403)
Q Consensus 241 --------GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~----------~~~vv~~~vd~~~g~ID~d~Le~~i~~~~p 302 (403)
+|+|++....|.|..... ....+. ...+..++ ..|+++|+++++ .++
T Consensus 119 ~~~~~~~~~~~vi~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~-~~~ 183 (392)
T 3ruy_A 119 DVKKVEANRAEIIVCEDNFHGRTMGA--------VSMSSNEEYKRGFGPMLPGIIVIP------YGDLEALKAAIT-PNT 183 (392)
T ss_dssp HTSCCCTTCCEEEEETTCCCCSSHHH--------HHTCSCTTTTTTCCSCCSSEEEEC------TTCHHHHHHHCC-TTE
T ss_pred hccCCCCCCcEEEEEcCCcCCCCHhh--------hhccCChhhccccCCCCCCCeeeC------cccHHHHHHHhc-cCe
Confidence 679999888775542100 011110 00122222 238999999997 468
Q ss_pred cEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccccccccccc-cc-CCCC-cccEEEEcCcCCCcC--Cce
Q 015647 303 KILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKE-LA-SPFD-YCDIVTSTTHKSLRG--PRG 371 (403)
Q Consensus 303 klViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~-~p~~-~aDivt~StHKtL~G--P~G 371 (403)
++|++...+ +|..+| +++|.++|+++|++|++|++|+ |+...+. .. ...+ ..|++++| |+|.| .++
T Consensus 184 ~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~ 260 (392)
T 3ruy_A 184 AAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQT-GLGRTGKVFACDWDNVTPDMYILG--KALGGGVFPI 260 (392)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCC
T ss_pred EEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCccccchhhhccCCCCCEEEEc--hhhhCChhhh
Confidence 888886543 467777 9999999999999999999995 3322121 11 1112 26888776 99987 678
Q ss_pred EEEEEeCC
Q 015647 372 GIIFFRRG 379 (403)
Q Consensus 372 G~I~~~~~ 379 (403)
|+++++++
T Consensus 261 G~~~~~~~ 268 (392)
T 3ruy_A 261 SCAAANRD 268 (392)
T ss_dssp EEEEECHH
T ss_pred EEEEECHH
Confidence 99988764
No 157
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.45 E-value=3e-13 Score=133.93 Aligned_cols=200 Identities=16% Similarity=0.038 Sum_probs=126.1
Q ss_pred hcccceeccC-cc---CcHHHHHHHHHHhhhcC--CCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC
Q 015647 151 FKGIELIASE-NF---VCRAVMEALGSHLTNKY--SEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY 224 (403)
Q Consensus 151 ~~~l~LiaSe-n~---~~p~V~eA~~s~l~~~y--~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~ 224 (403)
...|.|..+. ++ .++.+.+++...+.... ..+|+.. .|. .+ .|+.+++++|++++ +|+++
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~~~---~~----l~~~la~~~g~~~~----~v~~~ 97 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPT---EGY---AP----LRAFVAEWIGVRPE----EVLIT 97 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCT---TCC---HH----HHHHHHHHHTSCGG----GEEEE
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCC---CCC---HH----HHHHHHHHhCCChh----hEEEe
Confidence 3456664432 22 46788888877664310 0112111 111 12 35568888887653 35555
Q ss_pred -ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCc
Q 015647 225 -SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPK 303 (403)
Q Consensus 225 -SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pk 303 (403)
++++|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ ++ +|+++|++++++.+++
T Consensus 98 ~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~---------~~~~~~g--~~~~~~~~~~-~~-~d~~~l~~~l~~~~~~ 164 (397)
T 2zyj_A 98 TGSQQALDLVGKVFLDEGSPVLLEAPSYMGAI---------QAFRLQG--PRFLTVPAGE-EG-PDLDALEEVLKRERPR 164 (397)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH---------HHHHTTC--CEEEEEEEET-TE-ECHHHHHHHHHHCCCS
T ss_pred ccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH---------HHHHHcC--CEEEecCcCC-CC-CCHHHHHHHHhhcCCe
Confidence 5678999999999999999999887765432 1122333 3455566654 34 9999999999765688
Q ss_pred EEE-EeCC--CCCccccH---HHHHHHHHHcCCEEEEeccccccccccccccCCCC--ccc------EEEEcCcCCCc-C
Q 015647 304 ILI-CGGS--SYPREWDY---GRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCD------IVTSTTHKSLR-G 368 (403)
Q Consensus 304 lVi-v~~s--~~g~~~Di---~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aD------ivt~StHKtL~-G 368 (403)
+|+ +... .+|...+. ++|.++|+++|+++++|++|+.+... +....++. ..| +++.|+||+|+ |
T Consensus 165 ~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G 243 (397)
T 2zyj_A 165 FLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFG-EARLPSLFELAREAGYPGVIYLGSFSKVLSPG 243 (397)
T ss_dssp CEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCS-SCCCCCHHHHHHHHTCCCEEEEEESTTTTCGG
T ss_pred EEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCC-CCCCCchhhhCcccCCCeEEEEeccccccccc
Confidence 874 3332 24666664 58899999999999999999875432 11111111 123 88899999986 2
Q ss_pred CceEEEEEeC
Q 015647 369 PRGGIIFFRR 378 (403)
Q Consensus 369 P~GG~I~~~~ 378 (403)
.+.|++++++
T Consensus 244 ~r~G~~~~~~ 253 (397)
T 2zyj_A 244 LRVAFAVAHP 253 (397)
T ss_dssp GCCEEEECCH
T ss_pred ceeEEEecCH
Confidence 2348888864
No 158
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.45 E-value=2.5e-12 Score=125.85 Aligned_cols=196 Identities=15% Similarity=0.042 Sum_probs=123.0
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHH
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSA 229 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~A 229 (403)
..|.|..+++. .++.|++++...+.... +|+.. | .. ..|+.++++++++++ ..++++++++|
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~----~---~~----~l~~~la~~~~~~~~---~v~~~~g~~~a 88 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDCIE--RYPDA----D---YF----HLHQALARHHQVPAS---WILAGNGETES 88 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGGGG--SCCCT----T---CH----HHHHHHHHHHTSCGG---GEEEESSHHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHHhh--cCCCC----C---HH----HHHHHHHHHHCcCHH---HEEECCCHHHH
Confidence 34666666554 57899999887664311 22111 1 12 245678899998754 23445567899
Q ss_pred HHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCC-HHHHHHHhccCCCcEEEEe
Q 015647 230 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYID-YEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 230 n~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID-~d~Le~~i~~~~pklViv~ 308 (403)
+.+++.++ +||+|++....|.+.. ..+...| .+++.++++++++ ++ ++++.+.+. .++++|++.
T Consensus 89 l~~~~~~~--~gd~vl~~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~~-~~~l~~~~~~~~-~~~~~v~i~ 153 (364)
T 1lc5_A 89 IFTVASGL--KPRRAMIVTPGFAEYG---------RALAQSG--CEIRRWSLREADG-WQLTDAILEALT-PDLDCLFLC 153 (364)
T ss_dssp HHHHHHHH--CCSEEEEEESCCTHHH---------HHHHHTT--CEEEEEECCGGGT-TCCCTTHHHHCC-TTCCEEEEE
T ss_pred HHHHHHHc--CCCeEEEeCCCcHHHH---------HHHHHcC--CeEEEEeCCcccc-cchhHHHHHhcc-CCCCEEEEe
Confidence 99999888 7899999887764432 1123334 3455566553212 33 465555553 467877665
Q ss_pred CCC--CCcccc---HHHHHHHHHHcCCEEEEecccccccccc-ccccC-CCCcccEEEEcCcCCCc--CCceEEEE-EeC
Q 015647 309 GSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAA-KELAS-PFDYCDIVTSTTHKSLR--GPRGGIIF-FRR 378 (403)
Q Consensus 309 ~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~-g~~~~-p~~~aDivt~StHKtL~--GP~GG~I~-~~~ 378 (403)
..+ +|.+.+ +++|.++|+++|+++++|++|+.+.... ..... .....++++.|+||+++ |.+.|+++ .++
T Consensus 154 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 233 (364)
T 1lc5_A 154 TPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD 233 (364)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCH
Confidence 433 466777 8999999999999999999998654211 11110 11136789999999984 44458888 554
No 159
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.45 E-value=9.2e-13 Score=131.94 Aligned_cols=148 Identities=18% Similarity=0.147 Sum_probs=101.0
Q ss_pred EEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhcc
Q 015647 221 VQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMD 299 (403)
Q Consensus 221 V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~ 299 (403)
++++++++|+.+++.+++++||+|++....|.+... . .....| .++++++.+++ +..+|+++|++++++
T Consensus 112 ~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~-~-------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~~ 181 (428)
T 1iay_A 112 VMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR-D-------LRWRTG--VQLIPIHCESSNNFKITSKAVKEAYEN 181 (428)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH-H-------TTTTTC--CEEEEECCCTTTTTCCCHHHHHHHHHH
T ss_pred EEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHH-H-------HHHhcC--CEEEEeecCCccCCcCCHHHHHHHHHH
Confidence 344456789999999999999999999887755421 0 011233 34556665532 336899999998864
Q ss_pred -----CCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CCC-c-------cc--E
Q 015647 300 -----YRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD-Y-------CD--I 357 (403)
Q Consensus 300 -----~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~-~-------aD--i 357 (403)
.++++|++...+ +|...+ +++|.++|+++|++|++|++|+.+......... .+. . .| +
T Consensus 182 ~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 261 (428)
T 1iay_A 182 AQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVH 261 (428)
T ss_dssp HHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEE
T ss_pred HHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEE
Confidence 257877665433 567788 999999999999999999999864332111111 011 1 57 8
Q ss_pred EEEcCcCCC--cCCceEEEEEeC
Q 015647 358 VTSTTHKSL--RGPRGGIIFFRR 378 (403)
Q Consensus 358 vt~StHKtL--~GP~GG~I~~~~ 378 (403)
++.|+||+| .|.+.|++++.+
T Consensus 262 v~~s~sK~~g~~Glr~G~~~~~~ 284 (428)
T 1iay_A 262 IVYSLSKDMGLPGFRVGIIYSFN 284 (428)
T ss_dssp EEEESTTTSSCGGGCEEEEEESC
T ss_pred EEecchhhcCCCCceEEEEEeCC
Confidence 899999998 455568888843
No 160
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.44 E-value=9.1e-13 Score=128.92 Aligned_cols=202 Identities=14% Similarity=0.074 Sum_probs=125.4
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCChH
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPYSCT 227 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~SGT 227 (403)
+.|.|..+++. .++.|++++...+.... +|+.. .|. .++.+...+.+++.+|. +++ ..+++++|+
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~---~g~---~~lr~~la~~l~~~~g~~~~~~---~i~~t~g~~ 92 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTHSLN--IYPKS---AFE---ESLRAAQRGFFKRRFKIELKEN---ELISTLGSR 92 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGGGGG--SCCCT---TCC---HHHHHHHHHHHHHHHSCCCCGG---GEEEESSSH
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhhhcC--CCCCC---CCC---HHHHHHHHHHHHHHhCCCCCHH---HEEECcCcH
Confidence 45677666554 47899999887653211 22211 121 23333333445566686 443 234556788
Q ss_pred HHHHHHHhhhccC--CCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEE
Q 015647 228 SANFAVYTGLLLP--GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 228 ~An~aal~all~p--GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklV 305 (403)
+|+.+++.+++++ ||+|++....|.+.. ..+...| .++++++++++ +.+++ ++++++.+ ++++|
T Consensus 93 ~al~~~~~~~~~~~~gd~vl~~~p~~~~~~---------~~~~~~g--~~~~~~~~~~~-~~~~~-~l~~~~~~-~~~~v 158 (376)
T 3ezs_A 93 EVLFNFPSFVLFDYQNPTIAYPNPFYQIYE---------GAAKFIK--AKSLLMPLTKE-NDFTP-SLNEKELQ-EVDLV 158 (376)
T ss_dssp HHHHHHHHHHTTTCSSCEEEEEESCCTHHH---------HHHHHTT--CEEEEEECCGG-GTSCC-CCCHHHHH-HCSEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEecCCcHhHH---------HHHHHcC--CEEEEcccCCC-CCcch-hHHhhhcc-CCCEE
Confidence 9999999999999 999999887765432 1223333 45566666543 23444 66666654 57888
Q ss_pred EEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCC----------CCcccEEEEcCcCCC--cC
Q 015647 306 ICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASP----------FDYCDIVTSTTHKSL--RG 368 (403)
Q Consensus 306 iv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p----------~~~aDivt~StHKtL--~G 368 (403)
++...+ +|..++ +++|.++|+++|++|++|.+|....... ..... ....++++.|++|++ .|
T Consensus 159 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 237 (376)
T 3ezs_A 159 ILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENT-PPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPG 237 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS-CCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGG
T ss_pred EEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-CCCCHHHccccccccccCcEEEEecchhccCCcc
Confidence 775444 355655 6777788999999999999998743321 11110 113678999999997 34
Q ss_pred CceEEEEEeCC
Q 015647 369 PRGGIIFFRRG 379 (403)
Q Consensus 369 P~GG~I~~~~~ 379 (403)
.+.|+++.+++
T Consensus 238 ~r~G~~~~~~~ 248 (376)
T 3ezs_A 238 LRSGFIAGDSR 248 (376)
T ss_dssp GCCEEEEECHH
T ss_pred ceeEEEeeCHH
Confidence 44588887653
No 161
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.43 E-value=9e-13 Score=133.65 Aligned_cols=209 Identities=14% Similarity=0.133 Sum_probs=128.9
Q ss_pred hhcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCh
Q 015647 150 QFKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP-YSC 226 (403)
Q Consensus 150 q~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~-~SG 226 (403)
..+.|+|..+... .++.|.+++...+......+|+. ..|. .++.+...+.+.+.+|.+... -+|++ ++|
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~---~~lr~~ia~~l~~~~g~~~~~--~~v~~t~G~ 127 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSP---TRGR---PSLINSLIKLYSPIYNTELKA--ENVTVTTGA 127 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCC---TTCC---HHHHHHHHHHHTTTTTSCCCG--GGEEEESHH
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC---CCCC---HHHHHHHHHHHHHhcCCCCCh--hhEEEeCCH
Confidence 3455777655432 47889999887664310011111 1122 233333233344445643210 13444 456
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-----------CCCCCHHHHHH
Q 015647 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-----------TGYIDYEKLEE 295 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-----------~g~ID~d~Le~ 295 (403)
++|+.+++.+++++||+|++....|.+.. ..+...|. +++.++++++ ++.+|+++|++
T Consensus 128 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---------~~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~ 196 (447)
T 3b46_A 128 NEGILSCLMGLLNAGDEVIVFEPFFDQYI---------PNIELCGG--KVVYVPINPPKELDQRNTRGEEWTIDFEQFEK 196 (447)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHH---------HHHHHTTC--EEEEEEEECCGGGGTSCBCSTTSEECHHHHHT
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCchhHH---------HHHHHcCC--EEEEEeCCCccccccccccccCcccCHHHHHH
Confidence 89999999999999999999987765432 12333443 4445555433 34699999999
Q ss_pred HhccCCCcEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEecccccccccccccc-CCC----CcccEEEEcCcCC
Q 015647 296 KAMDYRPKILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELA-SPF----DYCDIVTSTTHKS 365 (403)
Q Consensus 296 ~i~~~~pklViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~-~p~----~~aDivt~StHKt 365 (403)
++. .++++|++...+ +|.+. ++++|.++|+++|+++++|++|..........+ ..+ ...|+++.|++|+
T Consensus 197 ~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~ 275 (447)
T 3b46_A 197 AIT-SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKS 275 (447)
T ss_dssp TCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHH
T ss_pred hhc-cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchh
Confidence 886 467888776443 35543 699999999999999999999886432211000 112 1378999999999
Q ss_pred Cc--CCceEEEEE-eC
Q 015647 366 LR--GPRGGIIFF-RR 378 (403)
Q Consensus 366 L~--GP~GG~I~~-~~ 378 (403)
+. |.+.|++++ ++
T Consensus 276 ~~~~G~riG~~~~~~~ 291 (447)
T 3b46_A 276 FAATGWRIGWVLSLNA 291 (447)
T ss_dssp TTCTTSCCEEEECSCH
T ss_pred cCCcchhhEEEEeCCH
Confidence 84 444699988 44
No 162
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.43 E-value=2.7e-12 Score=125.57 Aligned_cols=187 Identities=16% Similarity=0.089 Sum_probs=118.7
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhh---hc-
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTG---LL- 238 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~a---ll- 238 (403)
.++.|++++...+.. + ++++.+|. .....+ .++++++++|++ + -.++++||++|+.+++.+ +.
T Consensus 45 ~~~~v~~a~~~~~~~-~--~~~~~~y~--~~~~~~----l~~~la~~~g~~-~---~v~~~~g~t~a~~~~~~~~~~~~~ 111 (375)
T 2eh6_A 45 AYPKLTEALKEQVEK-L--LHVSNLYE--NPWQEE----LAHKLVKHFWTE-G---KVFFANSGTESVEAAIKLARKYWR 111 (375)
T ss_dssp SCHHHHHHHHHHHHH-C--SCCCTTBC--CHHHHH----HHHHHHHTSSSC-E---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-c--cccCcccC--CHHHHH----HHHHHHhhcCCC-C---eEEEeCchHHHHHHHHHHHHHHhc
Confidence 689999999887754 2 23333342 222222 356799999983 2 135567899999999875 35
Q ss_pred --cCC-CeEEecCCCCCccccccccCCccchhhhcccc-----eE-----EeeeecCCCCCCCCHHHHHHHhccCCCcEE
Q 015647 239 --LPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----FE-----SFPYKVNPQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 239 --~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~~-----vv~~~vd~~~g~ID~d~Le~~i~~~~pklV 305 (403)
+|| |+|++....+.+.... .....+.. +. +..++ .+|+++|++++++ ++++|
T Consensus 112 ~~~~g~~~vl~~~~~y~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v 176 (375)
T 2eh6_A 112 DKGKNKWKFISFENSFHGRTYG--------SLSATGQPKFHKGFEPLVPGFSYAK------LNDIDSVYKLLDE-ETAGI 176 (375)
T ss_dssp HTTCCCCEEEEEBTCCCCSSHH--------HHHHCBCGGGTTTTCSCCSSEEEEC------TTCHHHHHTTCCT-TEEEE
T ss_pred cCCCCCCEEEEECCCcCCCchh--------hhhhcCCccccCCCCCCCCCceeCC------CchHHHHHHHhcC-CeEEE
Confidence 788 9999998776443210 01111110 11 11111 2689999998874 67888
Q ss_pred EEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcCCc-eEEEEE
Q 015647 306 ICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRGPR-GGIIFF 376 (403)
Q Consensus 306 iv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~GP~-GG~I~~ 376 (403)
++...+ +|...+ +++|.++|+++|+++++|++|+ +|..........++ .+|++++| |+|.++. .|++++
T Consensus 177 ~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~ 254 (375)
T 2eh6_A 177 IIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPIGAILA 254 (375)
T ss_dssp EECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEE
T ss_pred EEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCeEEEEE
Confidence 886543 366667 9999999999999999999999 44322111001111 37888777 8886544 388887
Q ss_pred eCC
Q 015647 377 RRG 379 (403)
Q Consensus 377 ~~~ 379 (403)
+++
T Consensus 255 ~~~ 257 (375)
T 2eh6_A 255 REE 257 (375)
T ss_dssp EHH
T ss_pred cHH
Confidence 764
No 163
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.43 E-value=1e-13 Score=142.72 Aligned_cols=172 Identities=13% Similarity=0.022 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccC----CCeEEecCCCCCccccccccCCccchhhhcc
Q 015647 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLP----GDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS 271 (403)
Q Consensus 196 ~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~p----GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g 271 (403)
..-|.++.++++.+ |.+.. + ..+...++|.++++++.+.+++ ||+||++...|.+.+ +.+.+.|
T Consensus 116 ~ltn~l~ld~L~~~-G~~~~-~-~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~---------kAliL~G 183 (501)
T 3hl2_A 116 KITNSLVLDIIKLA-GVHTV-A-NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF---------KSMITAG 183 (501)
T ss_dssp HHHHHHHHHHHHHT-TCTTC-C-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH---------HHHHHTT
T ss_pred HHHHHHHHHHHHHc-CCCCC-C-cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHH---------HHHHHcC
Confidence 33455666777666 98863 2 1233445666888888888764 499999886643332 3455666
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCc--EEEE-eCCCC-C-ccccHHHHHHHHHHcCCEEEEeccccccccccc
Q 015647 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPK--ILIC-GGSSY-P-REWDYGRFRQIADKCGAVLMCDMAHISGLIAAK 346 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pk--lViv-~~s~~-g-~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g 346 (403)
....+++..++++...+|+++|+++|+++.++ ++++ ..+.| | ...|+++|++||+++|++++||+||++-+....
T Consensus 184 l~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~ 263 (501)
T 3hl2_A 184 FEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCM 263 (501)
T ss_dssp CEEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHH
T ss_pred CeEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhh
Confidence 55444443344445679999999999876432 3333 34455 4 447999999999999999999999998764322
Q ss_pred ccc-CCCC-c-ccEEEEcCcCCCcCCceEEE-EEeCC
Q 015647 347 ELA-SPFD-Y-CDIVTSTTHKSLRGPRGGII-FFRRG 379 (403)
Q Consensus 347 ~~~-~p~~-~-aDivt~StHKtL~GP~GG~I-~~~~~ 379 (403)
.++ ..+. + +|+++.|+||++..|-||.+ +.+++
T Consensus 264 ~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~ 300 (501)
T 3hl2_A 264 HLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND 300 (501)
T ss_dssp HHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH
T ss_pred hhHHHHHhcCCCcEEEecccccceeecCceEEEeCCH
Confidence 111 1222 3 99999999999999977655 45654
No 164
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.42 E-value=2.6e-12 Score=128.08 Aligned_cols=223 Identities=13% Similarity=0.126 Sum_probs=128.7
Q ss_pred CCCChHHHHHHHHHHHhhh-----cccceecc-------CccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHH
Q 015647 133 PLADPEIFDIMEKEKQRQF-----KGIELIAS-------ENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIEN 200 (403)
Q Consensus 133 ~~~d~ei~~li~~e~~rq~-----~~l~LiaS-------en~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~ 200 (403)
....+.++.++++-..... +.|+|-.+ ...+++.|.+++........ .+|+. ..|.. ++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~---~~g~~---~lr~ 87 (418)
T 3rq1_A 15 KKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-VGYAP---IAGIP---DFLC 87 (418)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-HSCCC---TTCCH---HHHH
T ss_pred CCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccccc-CCCCC---CCChH---HHHH
Confidence 3445567777655433222 44676655 33468889888765432111 01111 11222 2222
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015647 201 LCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 201 ~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
...+.+....+.+... ..+++.+|++|+.+++.+++++||+|++....|.++. ..+...| .+++.++
T Consensus 88 ~ia~~~~~~~~~~~~~--~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~---------~~~~~~g--~~~~~v~ 154 (418)
T 3rq1_A 88 AAEKECFGNFRPEGHI--RSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYR---------VICSDTG--RTLVTYS 154 (418)
T ss_dssp HHHHHHHGGGCCSSEE--EEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHH---------HHHHHTT--CEEEEEC
T ss_pred HHHHHHhcccCccccc--cEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHH---------HHHHHcC--CEEEEEe
Confidence 2122233333443110 1244556789999999999999999999987765432 1223334 4566666
Q ss_pred cCCCCCCCCHHHHHHHhccC---CCc-EEEEeCC-C--CCccccHHHHH---HHHH------HcCCEEEEeccccccccc
Q 015647 281 VNPQTGYIDYEKLEEKAMDY---RPK-ILICGGS-S--YPREWDYGRFR---QIAD------KCGAVLMCDMAHISGLIA 344 (403)
Q Consensus 281 vd~~~g~ID~d~Le~~i~~~---~pk-lViv~~s-~--~g~~~Di~~I~---~Iak------e~Ga~LivDaAh~~Glia 344 (403)
++++++.+|+++|++++++. +++ +|++... + +|.+.+.+++. ++|+ ++|+++++|.+|. ++..
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~-~~~~ 233 (418)
T 3rq1_A 155 LFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYL-DYSG 233 (418)
T ss_dssp SBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTG-GGSS
T ss_pred eeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccc-cccC
Confidence 65445689999999998752 455 6666533 3 46677755555 5555 8999999999984 3332
Q ss_pred ccc----ccCCCCc--cc---EEEEcCcCCCc--CCceEEEEE
Q 015647 345 AKE----LASPFDY--CD---IVTSTTHKSLR--GPRGGIIFF 376 (403)
Q Consensus 345 ~g~----~~~p~~~--aD---ivt~StHKtL~--GP~GG~I~~ 376 (403)
.+. +...+.. -| +++.|++|+++ |-+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~ 276 (418)
T 3rq1_A 234 EKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIG 276 (418)
T ss_dssp CHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEE
T ss_pred ChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEE
Confidence 211 0011111 23 77889999873 445588887
No 165
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.41 E-value=2.3e-12 Score=130.33 Aligned_cols=160 Identities=14% Similarity=0.087 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCC-hHHHHHHHHhhh-ccCCCeEEecCCCCCccccccccCCccchhhhcccce
Q 015647 197 QIENLCFERALKAFDLDSDNWGVNVQPYS-CTSANFAVYTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFF 274 (403)
Q Consensus 197 ~lE~~arerla~lfg~~~~~~~v~V~~~S-GT~An~aal~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~ 274 (403)
+++..+++++++++|++.+ ++.+++ +|.++.+++.++ +++||+|+++...|.+...- +.......| +
T Consensus 108 ~~~~~~~~~la~~~g~~~~----~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~-----~~~~a~~~G--~ 176 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIA----NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAV-----LRAYLEAVG--A 176 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEE----CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHH-----HHHHHHHTT--C
T ss_pred HHHHHHHHHHHHHhCCCcc----ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHH-----HHHHHHHCC--C
Confidence 3444578889999999863 444444 564545555443 68999999998776443210 000011234 4
Q ss_pred EEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC-CCCccccHHHHHHHHHHcCCEEEEecc-ccccccccccccCCC
Q 015647 275 ESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS-SYPREWDYGRFRQIADKCGAVLMCDMA-HISGLIAAKELASPF 352 (403)
Q Consensus 275 ~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s-~~g~~~Di~~I~~Iake~Ga~LivDaA-h~~Glia~g~~~~p~ 352 (403)
+++.+++ +++.+|+++ +. .++++|++..+ .+|.+.|+++|.++|+++|+++++|+. |+.|... .+-
T Consensus 177 ~v~~v~~--~~~~~d~~~----i~-~~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~-----~~~ 244 (438)
T 1wyu_A 177 KLLTLPL--EGGRTPLPE----VG-EEVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLK-----PPG 244 (438)
T ss_dssp EEEEECC--BTTBCCCCC----CC-TTEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBC-----CHH
T ss_pred EEEEEcC--cCCccCHHH----hC-CCeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcC-----CCc
Confidence 5555554 256788876 43 36788777644 457888999999999999999998866 6666532 121
Q ss_pred C-cccEEEEcCcC-----CCcCCceEEEEEeCC
Q 015647 353 D-YCDIVTSTTHK-----SLRGPRGGIIFFRRG 379 (403)
Q Consensus 353 ~-~aDivt~StHK-----tL~GP~GG~I~~~~~ 379 (403)
. .+|++++|+|| +++||++|+++++++
T Consensus 245 ~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~ 277 (438)
T 1wyu_A 245 AYGADIAVGDGQSLGLPMGFGGPHFGFLATKKA 277 (438)
T ss_dssp HHTCSEEEEECTTTTCCCGGGCSCCEEEEECGG
T ss_pred cCCCCEEEECCcccCCCccCCCCCeeEEEEcHH
Confidence 1 38999999888 688996698888764
No 166
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.41 E-value=6.4e-12 Score=126.61 Aligned_cols=201 Identities=15% Similarity=0.084 Sum_probs=121.3
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc----CCCCCCCcceEEeC-
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF----DLDSDNWGVNVQPY- 224 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf----g~~~~~~~v~V~~~- 224 (403)
+.|.|..+++. .+|.|++++...+..... ..+...|.......++ ++.+++++ +++++ .|+++
T Consensus 70 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~l----r~~ia~~~~~g~~~~~~----~i~~t~ 139 (449)
T 3qgu_A 70 KIISLGIGDTTEPLPKYIADAMAKAAAGLAT--REGYSGYGAEQGQGAL----REAVASTFYGHAGRAAD----EIFISD 139 (449)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHGGGG--SCCCCCSTTTTCCHHH----HHHHHHHHHTTTTCCGG----GEEEES
T ss_pred CEEEeeCCCCCCCCCHHHHHHHHHHHHhhcc--ccCCCCCCCCCCcHHH----HHHHHHHHHcCCCCCHH----HEEEcc
Confidence 45777665442 588999999887764211 1111112111111223 44577776 55553 35554
Q ss_pred ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccc--------eEEeeeecCCC-CCCCCHHHHHH
Q 015647 225 SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF--------FESFPYKVNPQ-TGYIDYEKLEE 295 (403)
Q Consensus 225 SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~--------~~vv~~~vd~~-~g~ID~d~Le~ 295 (403)
++++++.++ .+++++||+|++....|.++.. .+...|.. ++++.++++++ ....|++++
T Consensus 140 G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~---------~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 207 (449)
T 3qgu_A 140 GSKCDIARI-QMMFGSKPTVAVQDPSYPVYVD---------TSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-- 207 (449)
T ss_dssp CHHHHHHHH-HHHHCSSSCEEEEESCCTHHHH---------HHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC--
T ss_pred CHHHHHHHH-HHHhCCCCEEEEcCCCChhHHH---------HHHHcCCcccccccccceeEEEecccccCCcCChhHc--
Confidence 566777777 8889999999999888765531 12223322 12455555543 223444321
Q ss_pred HhccCCCcEEEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCC---C---CcccEEEEcCcC
Q 015647 296 KAMDYRPKILICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP---F---DYCDIVTSTTHK 364 (403)
Q Consensus 296 ~i~~~~pklViv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p---~---~~aDivt~StHK 364 (403)
.++++|++...++ |.++ ++++|+++|+++|++|++|.+|...... +..+.+ + ...++++.|++|
T Consensus 208 ----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK 282 (449)
T 3qgu_A 208 ----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISN-PDCPKTIYEIPGADEVAIETCSFSK 282 (449)
T ss_dssp ----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCC-TTSCSSGGGSTTGGGTEEEEEECSG
T ss_pred ----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcC-CCCCCCHhhccCCCCcEEEEecchh
Confidence 4678887764443 4555 4888889999999999999999874332 111111 1 135789999999
Q ss_pred CCc--CCceEEEEEeCC
Q 015647 365 SLR--GPRGGIIFFRRG 379 (403)
Q Consensus 365 tL~--GP~GG~I~~~~~ 379 (403)
+|+ |.+.|+++++++
T Consensus 283 ~~g~~G~r~G~~~~~~~ 299 (449)
T 3qgu_A 283 YAGFTGVRLGWTVVPKA 299 (449)
T ss_dssp GGTCTTCCCEEEECCTT
T ss_pred hcCCccceeEEEecCHH
Confidence 973 555699988765
No 167
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.40 E-value=2.4e-12 Score=127.11 Aligned_cols=188 Identities=18% Similarity=0.088 Sum_probs=118.8
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--c
Q 015647 162 FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--L 239 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~ 239 (403)
+.+|.|++++...+.. +. +.+..| ..+...+ .+++++++++.+.+ ..++++||++|+.+++.++. .
T Consensus 61 ~~~~~v~~a~~~~~~~-~~--~~~~~~--~~~~~~~----l~~~la~~~~~~~~---~v~~~~gg~~a~~~al~~~~~~~ 128 (395)
T 1vef_A 61 HGNPEVVEAVKRQAET-LM--AMPQTL--PTPMRGE----FYRTLTAILPPELN---RVFPVNSGTEANEAALKFARAHT 128 (395)
T ss_dssp BTCHHHHHHHHHHHHH-CC--CCCTTS--CCHHHHH----HHHHHHHTSCTTEE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-CC--CCcccc--CCHHHHH----HHHHHHHhcCCCcC---EEEEcCcHHHHHHHHHHHHHHHh
Confidence 4689999999887754 21 212222 2232333 45678999976543 23556689999999998764 6
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccc-----e-----EEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----F-----ESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~-----~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+||+|++.+..+.+... ..+...+.. + .+..++ ..|+++|++++++ ++++|++.+
T Consensus 129 ~~~~vi~~~~~y~~~~~--------~~~~~~g~~~~~~~~~p~~~~~~~~~------~~d~~~l~~~i~~-~~~~v~~~~ 193 (395)
T 1vef_A 129 GRKKFVAAMRGFSGRTM--------GSLSVTWEPKYREPFLPLVEPVEFIP------YNDVEALKRAVDE-ETAAVILEP 193 (395)
T ss_dssp SCCEEEEETTCCCCSSH--------HHHHTCCCHHHHGGGCSCSSCEEEEC------TTCHHHHHHHCCT-TEEEEEECS
T ss_pred CCCeEEEEcCCcCCCch--------hhhhhcCCcccccccCCCCCCeeEeC------CCcHHHHHHHhcc-CEEEEEEeC
Confidence 88999888766533211 011222221 0 011111 2589999999874 678888765
Q ss_pred C--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc-c-CCCC-cccEEEEcCcCCCcCC-ceEEEEEeCC
Q 015647 310 S--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL-A-SPFD-YCDIVTSTTHKSLRGP-RGGIIFFRRG 379 (403)
Q Consensus 310 s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~-~p~~-~aDivt~StHKtL~GP-~GG~I~~~~~ 379 (403)
. .+|...| +++|.++|+++|++|++|++|+ |+...+.. . ..++ .+|++ |+||+|.++ +.|+++++++
T Consensus 194 ~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~~ 270 (395)
T 1vef_A 194 VQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMREE 270 (395)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEHH
T ss_pred ccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCchhHhhhcCCCCCEE--EEcccccCCCceEEEEehHH
Confidence 3 3466777 9999999999999999999998 54222211 0 0111 36877 559998764 3488877764
No 168
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.40 E-value=3.5e-12 Score=125.19 Aligned_cols=159 Identities=14% Similarity=0.080 Sum_probs=107.9
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCC-hHHHHHHHHhhhccCC-CeEEecCCCCCccccccccCCccchhhhcccceEEeee
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYS-CTSANFAVYTGLLLPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY 279 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~S-GT~An~aal~all~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~ 279 (403)
.|+.+++++|++++ +|++++ +++|+.+++.+++++| |+|++....|.+.. ..+...| .+++.+
T Consensus 63 lr~~la~~~~~~~~----~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~---------~~~~~~g--~~~~~v 127 (356)
T 1fg7_A 63 VIENYAQYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS---------VSAETIG--VECRTV 127 (356)
T ss_dssp HHHHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHH---------HHHHHHT--CEEEEC
T ss_pred HHHHHHHHhCCChH----HEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHH---------HHHHHcC--CEEEEe
Confidence 46678999998764 455555 5789999999999999 99999987765432 1123334 345566
Q ss_pred ecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCCC--
Q 015647 280 KVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPFD-- 353 (403)
Q Consensus 280 ~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~~-- 353 (403)
++++ ++.+|++++++++. ++++|++...++ |...+.++|.+|++. +|+++++|++|....-....... ++
T Consensus 128 ~~~~-~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~ 203 (356)
T 1fg7_A 128 PTLD-NWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGW-LAEY 203 (356)
T ss_dssp CCCT-TSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGG-TTTC
T ss_pred eCCC-CCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHH-HhhC
Confidence 6653 46799999998886 688887765444 667776555554443 89999999999854311111110 11
Q ss_pred cccEEEEcCcCCCc--CCceEEEEEeCC
Q 015647 354 YCDIVTSTTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 354 ~aDivt~StHKtL~--GP~GG~I~~~~~ 379 (403)
..++++.|++|+++ |.+.|+++++++
T Consensus 204 ~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 231 (356)
T 1fg7_A 204 PHLAILRTLSKAFALAGLRCGFTLANEE 231 (356)
T ss_dssp TTEEEEEESSSTTCCGGGCCEEEEECHH
T ss_pred CCEEEEecchHhhcCchhhhEEEEeCHH
Confidence 25788999999873 444588888653
No 169
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.39 E-value=2e-12 Score=129.72 Aligned_cols=205 Identities=15% Similarity=0.110 Sum_probs=124.9
Q ss_pred hcccceeccC-c---cCcHHHHHHHHHHhhhcC--CCCCCCCccccchHHHHHHHHHHHHHHHHHcC---CCCCCCcceE
Q 015647 151 FKGIELIASE-N---FVCRAVMEALGSHLTNKY--SEGYPGARYYTGNQYIDQIENLCFERALKAFD---LDSDNWGVNV 221 (403)
Q Consensus 151 ~~~l~LiaSe-n---~~~p~V~eA~~s~l~~~y--~eG~pgsr~~~G~~~~~~lE~~arerla~lfg---~~~~~~~v~V 221 (403)
...|.|..+. + +.++.|++++...+.... ..+|+.. .|. .++++...+.+.+.+| ++++ .|
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~g~---~~lr~~la~~l~~~~g~~~~~~~----~v 112 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTT---EGD---PVLKQQILKLLERMYGITGLDED----NL 112 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCT---TCC---HHHHHHHHHHHHHHHCCCSCCGG----GE
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCC---CCC---HHHHHHHHHHHHhccCCCCCCcc----cE
Confidence 3456664442 2 246788998887765310 0112111 122 2333322223333338 4443 35
Q ss_pred EeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc-
Q 015647 222 QPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD- 299 (403)
Q Consensus 222 ~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~- 299 (403)
+++ +|++|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ ++ +|+++|++++++
T Consensus 113 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---------~~~~~~g--~~~~~v~~~~-~~-~d~~~l~~~l~~~ 179 (425)
T 1vp4_A 113 IFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAI---------NAFRQYL--ANFVVVPLED-DG-MDLNVLERKLSEF 179 (425)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH---------HHHHTTT--CEEEEEEEET-TE-ECHHHHHHHHHHH
T ss_pred EEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH---------HHHHHcC--CEEEEeccCC-CC-CCHHHHHHHHHhh
Confidence 555 5688999999999999999999887764432 1223333 3455666654 34 999999999875
Q ss_pred ------CCCcEEE-EeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC---C--cccEEEEcC
Q 015647 300 ------YRPKILI-CGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---D--YCDIVTSTT 362 (403)
Q Consensus 300 ------~~pklVi-v~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~--~aDivt~St 362 (403)
.++++|+ +...+ +|.+++ +++|.++|+++|+++++|++|+.+..... ...++ + ..++++.|+
T Consensus 180 ~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~ 258 (425)
T 1vp4_A 180 DKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGE-TVDPIFKIGGPERVVLLNTF 258 (425)
T ss_dssp HHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSC-CCCCHHHHHCTTTEEEEEES
T ss_pred hhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC-CCcCHHHhCCCCCEEEEecc
Confidence 2578874 44333 455554 67888999999999999999987543211 11111 1 256889999
Q ss_pred cCCCc-CCceEEEEEeCC
Q 015647 363 HKSLR-GPRGGIIFFRRG 379 (403)
Q Consensus 363 HKtL~-GP~GG~I~~~~~ 379 (403)
+|+|+ |.+.|+++++++
T Consensus 259 sK~~~~G~r~G~~~~~~~ 276 (425)
T 1vp4_A 259 SKVLAPGLRIGMVAGSKE 276 (425)
T ss_dssp TTTTCGGGCEEEEECCHH
T ss_pred ccccccccceEEEeeCHH
Confidence 99985 334589988753
No 170
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.39 E-value=4.6e-12 Score=126.07 Aligned_cols=144 Identities=13% Similarity=0.053 Sum_probs=94.7
Q ss_pred EEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC
Q 015647 221 VQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY 300 (403)
Q Consensus 221 V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~ 300 (403)
+++.+|++|+.+++.+++++||+|++....|.++. ..+...| .+++.++++++++.+|+++|++++++.
T Consensus 105 ~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~---------~~~~~~g--~~~~~~~~~~~~~~~d~~~l~~~l~~~ 173 (413)
T 3t18_A 105 IATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYR---------KICEEFG--RNFKTFEFFTDDFAFNIDVYKEAIDEG 173 (413)
T ss_dssp EEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHH---------HHHHHHT--CEEEEECCBCTTSSBCHHHHHHHHHHH
T ss_pred EEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHH---------HHHHHhC--CeEEEeeccCCCCCcCHHHHHHHHHHH
Confidence 44556889999999999999999999987665432 1223334 355666664345689999999998752
Q ss_pred ---CCc-EEEEeCC-C--CCccccHHHHH---HHHH------HcCCEEEEeccccccccccccccCCC----Cc--cc--
Q 015647 301 ---RPK-ILICGGS-S--YPREWDYGRFR---QIAD------KCGAVLMCDMAHISGLIAAKELASPF----DY--CD-- 356 (403)
Q Consensus 301 ---~pk-lViv~~s-~--~g~~~Di~~I~---~Iak------e~Ga~LivDaAh~~Glia~g~~~~p~----~~--aD-- 356 (403)
+++ +|++..+ + +|.+.+.+++. ++|+ ++|++|++|.+|. ++...+....++ .. .|
T Consensus 174 ~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~ 252 (413)
T 3t18_A 174 IRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYL-EFAGDGDQQRKFFEKFSNLPRNLF 252 (413)
T ss_dssp HHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTG-GGSSSSSTTTGGGGGGTTCCTTEE
T ss_pred hhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccc-cccCChhhHHHHHHHHhhcCCCee
Confidence 566 6666533 3 46777766555 5555 8999999999974 333322111111 11 12
Q ss_pred -EEEEcCcCCCc--CCceEEEEE
Q 015647 357 -IVTSTTHKSLR--GPRGGIIFF 376 (403)
Q Consensus 357 -ivt~StHKtL~--GP~GG~I~~ 376 (403)
+++.|++|+++ |.+.|++++
T Consensus 253 ~i~~~S~sK~~~~~G~riG~~~~ 275 (413)
T 3t18_A 253 VVVAFSMSKSHTAYGLRSGAAVG 275 (413)
T ss_dssp EEEEEEHHHHTTCGGGCCEEEEE
T ss_pred EEEEEecCccCCCcCcCcEEEEE
Confidence 77889999874 333488887
No 171
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.39 E-value=7.7e-13 Score=131.43 Aligned_cols=196 Identities=10% Similarity=-0.015 Sum_probs=119.0
Q ss_pred hhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEE-eCChHH
Q 015647 150 QFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQ-PYSCTS 228 (403)
Q Consensus 150 q~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~-~~SGT~ 228 (403)
....+++.+++..+++.|++++.... + ...+. +..+....+.++ .+++++++++|++..+ -.++ +++||+
T Consensus 38 ~~~~~~~~~~~~~~~~~v~~a~~~~~-~----~~~~~-~~~~~~~~~~~~-~~~~~la~~~g~~~~~--~i~~~t~g~t~ 108 (398)
T 2fyf_A 38 KPRDGRFGSGPSKVRLEQLQTLTTTA-A----ALFGT-SHRQAPVKNLVG-RVRSGLAELFSLPDGY--EVILGNGGATA 108 (398)
T ss_dssp SCSSCBCCSSSCCCCHHHHHGGGTTT-T----TTTTS-CTTSHHHHHHHH-HHHHHHHHHTTCCTTC--EEEEEETCHHH
T ss_pred ccCCccccCCCCCCCHHHHHHHhhcC-C----CccCc-CcCCHHHHHHHH-HHHHHHHHHhCCCCCc--eEEEeCCchhH
Confidence 34567888999999999999987521 0 11110 011233333344 4788999999997421 1233 567899
Q ss_pred HHHHHHhhhccCC-CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015647 229 ANFAVYTGLLLPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 229 An~aal~all~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
|+.+++.+++++| |.| ...+|+. ... ......+.+.+++.++++ ++..++. + +. .++|+|++
T Consensus 109 al~~~~~~l~~~gv~~v--~~~~~~~----~~~----~~~~~~~~g~~~~~v~~~-~g~~~~~-~----i~-~~~~~v~~ 171 (398)
T 2fyf_A 109 FWDAAAFGLIDKRSLHL--TYGEFSA----KFA----SAVSKNPFVGEPIIITSD-PGSAPEP-Q----TD-PSVDVIAW 171 (398)
T ss_dssp HHHHHHHHTCSSCEEEE--ECSHHHH----HHH----HHHHHCTTSCCCEEEECC-TTCCCCC-C----CC-TTCSEEEE
T ss_pred HHHHHHHHhcCCCeEEE--eCCHHHH----HHH----HHHHHhCCCCceEEEecC-CCCCCCc-c----cc-CCCCEEEE
Confidence 9999999999987 433 2222211 000 011222111233444444 2222332 1 33 46888876
Q ss_pred eCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015647 308 GGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 308 ~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
... .+|..+|+++|.++ +|++|++|++|+.|..+. ++..+|++++|+||++++|.| |+++.+++
T Consensus 172 ~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~-----~~~~~di~~~s~sK~~~~~gg~g~l~~~~~ 238 (398)
T 2fyf_A 172 AHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPV-----DIAETDAYYFAPQKNFASDGGLWLAIMSPA 238 (398)
T ss_dssp ESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCC-----CGGGCSEEEECTTSTTCSCSSEEEEEECHH
T ss_pred eCcCCCcceecchHHhhhh---cCCeEEEEeccccCCccc-----CcccCcEEEEecCcccCCCCceEEEEECHH
Confidence 543 46788999988887 899999999999876432 233489999999999866633 77777653
No 172
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.39 E-value=1.3e-12 Score=130.93 Aligned_cols=163 Identities=15% Similarity=0.054 Sum_probs=109.1
Q ss_pred HHHHHHHc-----CCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhh-cccceEE
Q 015647 203 FERALKAF-----DLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSA-ASIFFES 276 (403)
Q Consensus 203 rerla~lf-----g~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~-~g~~~~v 276 (403)
|+.+++++ +++++.+...+++++|++|+.+++.+++++||+|++....|.++.. .+.. .| .++
T Consensus 94 r~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---------~~~~~~g--~~~ 162 (430)
T 2x5f_A 94 RDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL---------VFNTRNG--ANL 162 (430)
T ss_dssp HHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH---------HHTTTTC--CEE
T ss_pred HHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHH---------HHHHhcC--CeE
Confidence 44566666 7765310003445567899999999999999999999887755421 1222 33 455
Q ss_pred eeeecCCCCCCCCHHHHHHHhccC--CCcEEEEeCCC--CCcccc---HHHHHHHHHH-----cCCEEEEeccccccccc
Q 015647 277 FPYKVNPQTGYIDYEKLEEKAMDY--RPKILICGGSS--YPREWD---YGRFRQIADK-----CGAVLMCDMAHISGLIA 344 (403)
Q Consensus 277 v~~~vd~~~g~ID~d~Le~~i~~~--~pklViv~~s~--~g~~~D---i~~I~~Iake-----~Ga~LivDaAh~~Glia 344 (403)
+.++++++++.+|+++|++++++. ++++|++..++ +|...+ +++|.++|++ +|+++++|.+|......
T Consensus 163 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~ 242 (430)
T 2x5f_A 163 QTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYE 242 (430)
T ss_dssp EEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCS
T ss_pred EEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCC
Confidence 666665433579999999998753 56777665444 456677 8899999999 99999999999864332
Q ss_pred cccccC---CC---Ccc---cEEEEcCcCCCc--CCceEEEEE
Q 015647 345 AKELAS---PF---DYC---DIVTSTTHKSLR--GPRGGIIFF 376 (403)
Q Consensus 345 ~g~~~~---p~---~~a---Divt~StHKtL~--GP~GG~I~~ 376 (403)
...... .+ ... ++++.|+||+|+ |.+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~ 285 (430)
T 2x5f_A 243 DVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTF 285 (430)
T ss_dssp SSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEE
T ss_pred cccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEE
Confidence 110111 11 123 677899999983 333488888
No 173
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.38 E-value=1.3e-11 Score=123.66 Aligned_cols=204 Identities=12% Similarity=-0.061 Sum_probs=118.6
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc---c
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL---L 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all---~ 239 (403)
.+|.|++++...+.... .++..+|. .+...+ .+++++++++.+.+ -.++++||++||.+++.++. +
T Consensus 60 ~~p~v~~a~~~~~~~~~--~~~~~~~~--~~~~~~----l~~~la~~~~~~~~---~v~~~~ggtea~~~ai~~~~~~~~ 128 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMS--HVMFGGIT--HAPAIE----LCRKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYWQ 128 (429)
T ss_dssp SCHHHHHHHHHHHHHCS--CCCCSSEE--CHHHHH----HHHHHHHHSCTTCC---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--cccccccC--CHHHHH----HHHHHHHhCCCCCC---EEEEeCCHHHHHHHHHHHHHHHhc
Confidence 48999999988775432 12111221 222222 23468899986654 13455679999999988653 2
Q ss_pred ----CCCeEEecCCCCCcccccc-ccCC----ccchhhhcccceEEeeeecC---CCCCCCCHHHHHHHhcc--CCCcEE
Q 015647 240 ----PGDRIMGLDSPSGGHLSHG-YHTP----GGKKVSAASIFFESFPYKVN---PQTGYIDYEKLEEKAMD--YRPKIL 305 (403)
Q Consensus 240 ----pGD~VL~~~~ehgghlsh~-~~~~----~~~~v~~~g~~~~vv~~~vd---~~~g~ID~d~Le~~i~~--~~pklV 305 (403)
|||+|++....+.+..... .+.. ...........+..++++.. ...+.+|+++|++++++ .++++|
T Consensus 129 ~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v 208 (429)
T 1s0a_A 129 AKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAV 208 (429)
T ss_dssp HHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEE
T ss_pred ccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEE
Confidence 6999999886553321000 0000 00000000001233333211 01235899999999874 345677
Q ss_pred EEeCC-C--CCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcCC--ceEEE
Q 015647 306 ICGGS-S--YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRGP--RGGII 374 (403)
Q Consensus 306 iv~~s-~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~GP--~GG~I 374 (403)
++.+. + .|...+ +++|.++|+++|++||+|++|+ +|..+.......++ ..|++++| |+|+|+ +.|++
T Consensus 209 i~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~s--K~l~~G~~~iG~~ 286 (429)
T 1s0a_A 209 IIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLG--KALTGGTMTLSAT 286 (429)
T ss_dssp EECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTSSSCCEEE
T ss_pred EEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEec--ccccCCCccceEE
Confidence 77764 3 465666 9999999999999999999997 44322110001112 36888665 998764 45888
Q ss_pred EEeCC
Q 015647 375 FFRRG 379 (403)
Q Consensus 375 ~~~~~ 379 (403)
+.+++
T Consensus 287 ~~~~~ 291 (429)
T 1s0a_A 287 LTTRE 291 (429)
T ss_dssp EECHH
T ss_pred EeCHH
Confidence 87653
No 174
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.38 E-value=8.9e-12 Score=126.58 Aligned_cols=196 Identities=14% Similarity=0.064 Sum_probs=121.0
Q ss_pred ccceeccCcc-----CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015647 153 GIELIASENF-----VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSen~-----~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
.|.+.++.++ .+|.|++++...+.. +. +.+..+ ..+...++ ++++++++|.+. .++++||+
T Consensus 78 ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~-~~--~~~~~~--~~~~~~~l----~~~la~~~g~~~-----v~~~~sGs 143 (439)
T 2oat_A 78 YFDFLSSYSAVNQGHCHPKIVNALKSQVDK-LT--LTSRAF--YNNVLGEY----EEYITKLFNYHK-----VLPMNTGV 143 (439)
T ss_dssp EEESSGGGGTTTTCBTCHHHHHHHHHHHTT-CS--CCCTTS--EESSHHHH----HHHHHHHHTCSE-----EEEESSHH
T ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHHh-cC--cccCcc--CCHHHHHH----HHHHHHhcCCCE-----EEEeCCHH
Confidence 4666554432 579999999877643 21 211122 12223333 345788888543 35667899
Q ss_pred HHHHHHHhhhc---------cCC-CeEEecCCCCCccccccccCCccchhhhccc-----c-----eEEeeeecCCCCCC
Q 015647 228 SANFAVYTGLL---------LPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASI-----F-----FESFPYKVNPQTGY 287 (403)
Q Consensus 228 ~An~aal~all---------~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~-----~-----~~vv~~~vd~~~g~ 287 (403)
+||.+++.++. .+| |+|++....+.|.... .+...+. . ..+..++ .
T Consensus 144 eA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~--------~~~~~g~~~~~~~~~p~~~~v~~~~------~ 209 (439)
T 2oat_A 144 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLS--------AISSSTDPTSYDGFGPFMPGFDIIP------Y 209 (439)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHH--------HHTTCCCHHHHTTSCSCCTTEEEEC------S
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHh--------HhhcCCChhcccCCCCCCCCeEEeC------C
Confidence 99999998764 367 8999887665433210 1111110 0 1122222 2
Q ss_pred CCHHHHHHHhccCCCcEEEEeCCC--CCccc----cHHHHHHHHHHcCCEEEEeccccccccccccc-c-CCCC-cccEE
Q 015647 288 IDYEKLEEKAMDYRPKILICGGSS--YPREW----DYGRFRQIADKCGAVLMCDMAHISGLIAAKEL-A-SPFD-YCDIV 358 (403)
Q Consensus 288 ID~d~Le~~i~~~~pklViv~~s~--~g~~~----Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~-~p~~-~aDiv 358 (403)
.|+++|+++++..++++|++.+.. .|... ++++|+++|+++|++||+|.+| .|+...+.. . ..++ ..|++
T Consensus 210 ~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~g~~g~~~~~~~~~~~~Di~ 288 (439)
T 2oat_A 210 NDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ-TGLARTGRWLAVDYENVRPDIV 288 (439)
T ss_dssp SCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSGGGGGTCCCSEE
T ss_pred CCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCcchhHHHhCCCCcEE
Confidence 489999999964456778876542 35455 8999999999999999999999 554322211 0 1112 26887
Q ss_pred EEcCcCCCcCC--ceEEEEEeCC
Q 015647 359 TSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 359 t~StHKtL~GP--~GG~I~~~~~ 379 (403)
|++|+|.|. ++|+++++++
T Consensus 289 --t~sK~l~~G~~~~G~v~~~~~ 309 (439)
T 2oat_A 289 --LLGKALSGGLYPVSAVLCDDD 309 (439)
T ss_dssp --EECGGGGTTSSCCEEEEECHH
T ss_pred --EecccccCCCCCeEEEEECHH
Confidence 556998764 5788888764
No 175
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.38 E-value=1.2e-11 Score=125.22 Aligned_cols=186 Identities=15% Similarity=0.081 Sum_probs=112.4
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc----
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL---- 238 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all---- 238 (403)
.+|.|.+++...+.. +. +.+..+ ..+...++ ++++++++|.+. .++++||++||.+++.++.
T Consensus 82 ~~p~v~~ai~~~~~~-~~--~~~~~~--~~~~~~~l----~~~la~~~g~~~-----v~~~~sGseA~~~al~~a~~~~~ 147 (433)
T 1z7d_A 82 CHPNILNAMINQAKN-LT--ICSRAF--FSVPLGIC----ERYLTNLLGYDK-----VLMMNTGAEANETAYKLCRKWGY 147 (433)
T ss_dssp TCHHHHHHHHHHHTT-CS--CCCTTS--EEHHHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-CC--CccCCc--CCHHHHHH----HHHHHhhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 578899998877643 21 211112 22333333 346888888643 3566789999999998753
Q ss_pred -----cCC-CeEEecCCCCCccccccccCCccchhhhccc-----c-----eEEeeeecCCCCCCCCHHHHHHHhccCCC
Q 015647 239 -----LPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASI-----F-----FESFPYKVNPQTGYIDYEKLEEKAMDYRP 302 (403)
Q Consensus 239 -----~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~-----~-----~~vv~~~vd~~~g~ID~d~Le~~i~~~~p 302 (403)
.+| |+|++.+..+.|.... .+...+. . ..+..++ ..|+++|+++++..++
T Consensus 148 ~~~g~~~gr~~vi~~~~~yhg~~~~--------~~~~~g~~~~~~~~~p~~~~v~~~~------~~d~~~le~~l~~~~~ 213 (433)
T 1z7d_A 148 EVKKIPENMAKIVVCKNNFSGRTLG--------CISASTTKKCTSNFGPFAPQFSKVP------YDDLEALEEELKDPNV 213 (433)
T ss_dssp HTSCCCTTCCEEEEETTC----------------------------------CEEEEC------TTCHHHHHHHHTSTTE
T ss_pred hccCCCCCCCeEEEEeCCcCCcchh--------hhcccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCCCCE
Confidence 467 9999988665443210 1111110 0 1122222 2489999999954457
Q ss_pred cEEEEeCC--CCCccc----cHHHHHHHHHHcCCEEEEeccccccccccccc-c-CCCC-cccEEEEcCcCCCcCC--ce
Q 015647 303 KILICGGS--SYPREW----DYGRFRQIADKCGAVLMCDMAHISGLIAAKEL-A-SPFD-YCDIVTSTTHKSLRGP--RG 371 (403)
Q Consensus 303 klViv~~s--~~g~~~----Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~-~p~~-~aDivt~StHKtL~GP--~G 371 (403)
++|++.+. +.|... ++++|+++|+++|++||+|.+|. |+...+.. . ..++ ..|+++ +.|+|.|. ++
T Consensus 214 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~t--~sK~l~~G~~~~ 290 (433)
T 1z7d_A 214 CAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVIL--LGKALSGGHYPI 290 (433)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE--ECGGGGTTSSCC
T ss_pred EEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEEE--ECccccCCCCCe
Confidence 78887753 235444 89999999999999999999996 54322211 0 1112 378874 56998754 57
Q ss_pred EEEEEeCC
Q 015647 372 GIIFFRRG 379 (403)
Q Consensus 372 G~I~~~~~ 379 (403)
|+++++++
T Consensus 291 G~v~~~~~ 298 (433)
T 1z7d_A 291 SAVLANDD 298 (433)
T ss_dssp EEEEECHH
T ss_pred EEEEECHH
Confidence 88888764
No 176
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.36 E-value=2.2e-11 Score=125.92 Aligned_cols=206 Identities=10% Similarity=0.028 Sum_probs=124.3
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCChHHHHH
Q 015647 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~SGT~An~ 231 (403)
+++-.+....++.++++....+......+..+.....|.. .+.+...+.+.+.+| ++++ -.++++++++|+.
T Consensus 98 i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~---~lr~~ia~~~~~~~g~~~~~~---~i~~t~G~~~al~ 171 (500)
T 3tcm_A 98 LQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIH---GLRDAIASGIASRDGFPANAD---DIFLTDGASPGVH 171 (500)
T ss_dssp GGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCH---HHHHHHHHHHHHHHSSCCCGG---GEEEESSSHHHHH
T ss_pred ccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChH---HHHHHHHHHHHhhcCCCCCcc---cEEEcCCHHHHHH
Confidence 4443334446777777766555442110111111112332 233322333444445 3443 2345567889999
Q ss_pred HHHhhhc-cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccC-----CCcE
Q 015647 232 AVYTGLL-LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDY-----RPKI 304 (403)
Q Consensus 232 aal~all-~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~-----~pkl 304 (403)
+++.+++ ++||+|++....|.++. ..+...| .+++.|+++++ +..+|+++|++++++. ++++
T Consensus 172 ~~~~~l~~~~gd~Vlv~~p~y~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ 240 (500)
T 3tcm_A 172 LMMQLLIRNEKDGILVPIPQYPLYS---------ASIALHG--GALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRA 240 (500)
T ss_dssp HHHHHHCCSTTEEEEEEESCCTHHH---------HHHHHTT--CEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCCCCEEEEeCCCcHhHH---------HHHHHcC--CEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceE
Confidence 9999998 89999999988765443 1233344 45666676654 3479999999999753 5787
Q ss_pred EEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCC-------C----Cccc-EEEEcCcCCCc
Q 015647 305 LICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASP-------F----DYCD-IVTSTTHKSLR 367 (403)
Q Consensus 305 Viv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p-------~----~~aD-ivt~StHKtL~ 367 (403)
|++...+ +|.+++ +++|.++|+++|+++++|.+|..+....+....+ + +..+ +++.|++|+|.
T Consensus 241 ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 320 (500)
T 3tcm_A 241 LVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYY 320 (500)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTT
T ss_pred EEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCC
Confidence 7665444 355544 6677777999999999999988754422211111 1 1122 56779999983
Q ss_pred ---CCceEEEEE
Q 015647 368 ---GPRGGIIFF 376 (403)
Q Consensus 368 ---GP~GG~I~~ 376 (403)
|-++|++++
T Consensus 321 g~~G~R~G~~~~ 332 (500)
T 3tcm_A 321 GECGKRGGYFEI 332 (500)
T ss_dssp CCGGGCCEEEEE
T ss_pred CCCccceEEEEE
Confidence 667799887
No 177
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.35 E-value=7.1e-12 Score=127.61 Aligned_cols=207 Identities=15% Similarity=0.067 Sum_probs=124.8
Q ss_pred hcccceeccC---c-cCcHHHHHHHHHHhhhcC--CCCCCCCccccchHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEe
Q 015647 151 FKGIELIASE---N-FVCRAVMEALGSHLTNKY--SEGYPGARYYTGNQYIDQIENLCFERALKAFDL-DSDNWGVNVQP 223 (403)
Q Consensus 151 ~~~l~LiaSe---n-~~~p~V~eA~~s~l~~~y--~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~-~~~~~~v~V~~ 223 (403)
..-|.|..+. . +.++.+.+++...+.... ..+|+.. .|. .++++...+.+++.+|. +++ -.+++
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~---~g~---~~lr~~ia~~~~~~~g~~~~~---~v~~t 146 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTT---KGF---TPLRETLMKWLGKRYGISQDN---DIMIT 146 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCT---TCC---HHHHHHHHHHHHHHHCCCTTS---EEEEE
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCC---CCc---HHHHHHHHHHHHHhcCcCChh---hEEEe
Confidence 3456664432 1 246778888776664310 0011110 122 22332222233333487 332 13445
Q ss_pred CChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhc----c
Q 015647 224 YSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAM----D 299 (403)
Q Consensus 224 ~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~----~ 299 (403)
+++++|+.+++.+++++||+|++....|.+.. ..+...| .+++.+++++ .+ +|+++|+++++ +
T Consensus 147 ~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~---------~~~~~~g--~~~~~v~~~~-~g-~d~~~L~~~l~~~~~~ 213 (448)
T 3aow_A 147 SGSQQALDLIGRVFLNPGDIVVVEAPTYLAAL---------QAFNFYE--PQYIQIPLDD-EG-MKVEILEEKLKELKSQ 213 (448)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEEESCCHHHH---------HHHHTTC--CEEEEEEEET-TE-ECHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHcCCCCEEEEeCCChHHHH---------HHHHHcC--CEEEEeccCC-CC-CCHHHHHHHHhhhhcc
Confidence 56789999999999999999999887765432 1223334 4555666664 34 99999999987 4
Q ss_pred -CCCcEEEE-eCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CCC--cccEEEEcCcCCCc-
Q 015647 300 -YRPKILIC-GGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD--YCDIVTSTTHKSLR- 367 (403)
Q Consensus 300 -~~pklViv-~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~--~aDivt~StHKtL~- 367 (403)
.++|+|++ ...+ +|..++ +++|.++|+++|+++++|.+|..+.......+. .++ ..++++.|++|+|.
T Consensus 214 ~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~ 293 (448)
T 3aow_A 214 GKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAP 293 (448)
T ss_dssp TCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCG
T ss_pred CCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccc
Confidence 36788754 3322 455555 678899999999999999999875432111111 111 24688899999985
Q ss_pred CCceEEEEEeCC
Q 015647 368 GPRGGIIFFRRG 379 (403)
Q Consensus 368 GP~GG~I~~~~~ 379 (403)
|.+.|+++++++
T Consensus 294 GlriG~v~~~~~ 305 (448)
T 3aow_A 294 GFRIGWMVGDPG 305 (448)
T ss_dssp GGCCEEEEECHH
T ss_pred cccEEEEEeCHH
Confidence 223499988753
No 178
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.34 E-value=5.8e-12 Score=124.49 Aligned_cols=184 Identities=18% Similarity=0.120 Sum_probs=115.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc----
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL---- 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~---- 239 (403)
+|.|.+++...+.... +.+..+ ..+...+ .+++++++++.+. .++++||++|+.+++.+++.
T Consensus 57 ~p~v~~a~~~~~~~~~---~~~~~~--~~~~~~~----l~~~la~~~~~~~-----v~~~~gg~~a~~~al~~~~~~~~~ 122 (406)
T 4adb_A 57 HPELREALNEQASKFW---HTGNGY--TNEPVLR----LAKKLIDATFADR-----VFFCNSGAEANEAALKLARKFAHD 122 (406)
T ss_dssp CHHHHHHHHHHHTTCS---CCCTTS--CCHHHHH----HHHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcc---cccCCc--CCHHHHH----HHHHHHhhCCCCe-----EEEeCcHHHHHHHHHHHHHHHHHh
Confidence 7899999887765422 111122 2333333 3557899998774 46677899999999998865
Q ss_pred ---CC-CeEEecCCCCCccccccccCCccchhhhcccc----------eEEeeeecCCCCCCCCHHHHHHHhccCCCcEE
Q 015647 240 ---PG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF----------FESFPYKVNPQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 240 ---pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~----------~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklV 305 (403)
+| |+|++....+.+.... .....+.. ..+..++ ..|+++|+++++ .++++|
T Consensus 123 ~~~~g~~~vi~~~~~y~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~-~~~~~v 187 (406)
T 4adb_A 123 RYGSHKSGIVAFKNAFHGRTLF--------TVSAGGQPAYSQDFAPLPADIRHAA------YNDINSASALID-DSTCAV 187 (406)
T ss_dssp HTCTTCCEEEEETTCCCCSSHH--------HHHHSSCGGGTGGGCSCCSSEEEEC------TTCHHHHHTTCS-TTEEEE
T ss_pred cCCCCCcEEEEECCCcCCCcHH--------HhhccCCccccccCCCCCCCceEeC------CCcHHHHHHHhc-CCeEEE
Confidence 66 9999888776443211 11111110 0111211 258999999886 468888
Q ss_pred EEeCCC-CCc-----cccHHHHHHHHHHcCCEEEEeccccccccccccc-c-CCCC-cccEEEEcCcCCCcC-CceEEEE
Q 015647 306 ICGGSS-YPR-----EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL-A-SPFD-YCDIVTSTTHKSLRG-PRGGIIF 375 (403)
Q Consensus 306 iv~~s~-~g~-----~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~-~p~~-~aDivt~StHKtL~G-P~GG~I~ 375 (403)
++.+.+ .|. ..++++|.++|+++|++|++|++|+ |+...+.. . ..++ ..|++++ +|+|.+ .++|+++
T Consensus 188 ~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~~ 264 (406)
T 4adb_A 188 IVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLTT--AKALGGGFPVGALL 264 (406)
T ss_dssp EECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEE
T ss_pred EEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEEe--chhhcCCCCeEEEE
Confidence 887432 232 3479999999999999999999997 44222211 0 0111 2688855 999852 3568888
Q ss_pred EeCC
Q 015647 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
.+++
T Consensus 265 ~~~~ 268 (406)
T 4adb_A 265 ATEE 268 (406)
T ss_dssp ECHH
T ss_pred EcHH
Confidence 8764
No 179
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.34 E-value=2.2e-11 Score=121.98 Aligned_cols=215 Identities=16% Similarity=0.128 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHh-hhcccceeccC-------ccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 015647 138 EIFDIMEKEKQR-QFKGIELIASE-------NFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKA 209 (403)
Q Consensus 138 ei~~li~~e~~r-q~~~l~LiaSe-------n~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~l 209 (403)
.+..+...-... ..+.|+|..+. +++++.|++++...+......+|+. ..|.. + .|+.++++
T Consensus 35 ~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~~---~----lr~~ia~~ 104 (420)
T 4f4e_A 35 PILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLP---IDGIA---A----YDASVQKL 104 (420)
T ss_dssp HHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCC---TTCCH---H----HHHHHHHH
T ss_pred hHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCC---CCCcH---H----HHHHHHHH
Confidence 466666554332 23567776662 2335899999988775422112221 12321 1 23344454
Q ss_pred cCC------CCCCCcceE-EeCChHHHHHHH--HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015647 210 FDL------DSDNWGVNV-QPYSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 210 fg~------~~~~~~v~V-~~~SGT~An~aa--l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
++. +++. ++| ++++|++|+.++ +.+++++||+|++....|.++. ..+...|. +++.++
T Consensus 105 l~~~~~~~~~~~~--~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~---------~~~~~~g~--~~~~v~ 171 (420)
T 4f4e_A 105 LLGDDSPLIAAGR--VVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHR---------ALFDMAGF--EVVAYP 171 (420)
T ss_dssp HHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHH---------HHHHHTTC--CEEEEE
T ss_pred hcCCCccccccCc--eEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHH---------HHHHHcCC--eEEEee
Confidence 432 1210 134 445688999998 5567899999999987765442 12333443 445555
Q ss_pred c-CCCCCCCCHHHHHHHhccC--CCcEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccc-c-ccC
Q 015647 281 V-NPQTGYIDYEKLEEKAMDY--RPKILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAK-E-LAS 350 (403)
Q Consensus 281 v-d~~~g~ID~d~Le~~i~~~--~pklViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g-~-~~~ 350 (403)
+ +++++.+|+++|++.+++. ++++|++...+ +|... ++++|.++|+++|+++++|.++.-. ...+ . ...
T Consensus 172 ~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~-~~~~~~~~~~ 250 (420)
T 4f4e_A 172 YYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGF-GESIEADAAA 250 (420)
T ss_dssp CEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTS-SSCTTGGGHH
T ss_pred eeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccc-cCCcchhhHH
Confidence 4 2346789999999999753 35677765444 34554 4778889999999999999997433 2211 0 000
Q ss_pred -----CCCcccEEEEcCcCCCc--CCceEEEEE
Q 015647 351 -----PFDYCDIVTSTTHKSLR--GPRGGIIFF 376 (403)
Q Consensus 351 -----p~~~aDivt~StHKtL~--GP~GG~I~~ 376 (403)
.....++++.|++|+++ |.+-|+++.
T Consensus 251 ~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 283 (420)
T 4f4e_A 251 VRLFAAANLNVFVSSSFSKSFSLYGERVGALSI 283 (420)
T ss_dssp HHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEE
T ss_pred HHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEE
Confidence 01124588899999874 444488764
No 180
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.33 E-value=1e-10 Score=115.68 Aligned_cols=214 Identities=16% Similarity=0.090 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHhhh-cccceeccC-------ccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 015647 138 EIFDIMEKEKQRQF-KGIELIASE-------NFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKA 209 (403)
Q Consensus 138 ei~~li~~e~~rq~-~~l~LiaSe-------n~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~l 209 (403)
.++.+.+.-..... +.|+|-.+. .++.++|++++...+.+....+|+ ...|.+ ..|+.++++
T Consensus 14 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~---~~~g~~-------~lr~~ia~~ 83 (401)
T 7aat_A 14 PILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYL---PIAGLA-------DFTRASAEL 83 (401)
T ss_dssp HHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCC---CTTCCH-------HHHHHHHHH
T ss_pred hhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCC---CCCCCH-------HHHHHHHHH
Confidence 46666554433322 346665443 233567888887665422212222 122322 134456666
Q ss_pred cCCC------CCCCcceEE---eCChHHHHHHHHhhhc---cCCCeEEecCCCCCccccccccCCccchhhhcccceEEe
Q 015647 210 FDLD------SDNWGVNVQ---PYSCTSANFAVYTGLL---LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESF 277 (403)
Q Consensus 210 fg~~------~~~~~v~V~---~~SGT~An~aal~all---~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv 277 (403)
++.. ++ +|. +.+||+|++.++.++. +|||+|++....|.++.. .+...|. +++
T Consensus 84 ~~~~~~~~~~~~----~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~---------~~~~~g~--~~~ 148 (401)
T 7aat_A 84 ALGENSEAFKSG----RYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTP---------IFRDAGL--QLQ 148 (401)
T ss_dssp HHCTTCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHH---------HHHHTTC--EEE
T ss_pred hcCCCccccccC----ceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHH---------HHHHcCC--eeE
Confidence 6533 32 232 4578899998877664 899999999887765531 2333443 455
Q ss_pred eeecC-CCCCCCCHHHHHHHhccC--CCcEEEEeCCCC--Ccc---ccHHHHHHHHHHcCCEEEEeccccccccccc---
Q 015647 278 PYKVN-PQTGYIDYEKLEEKAMDY--RPKILICGGSSY--PRE---WDYGRFRQIADKCGAVLMCDMAHISGLIAAK--- 346 (403)
Q Consensus 278 ~~~vd-~~~g~ID~d~Le~~i~~~--~pklViv~~s~~--g~~---~Di~~I~~Iake~Ga~LivDaAh~~Glia~g--- 346 (403)
.++++ ++++.+|++++++.+++. ++++|++...++ |.. .++++|.++|+++|+++++|.+|........
T Consensus 149 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 228 (401)
T 7aat_A 149 AYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRD 228 (401)
T ss_dssp EEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHH
T ss_pred eeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCcccc
Confidence 55543 235789999888887653 457777765544 444 4588889999999999999999764322110
Q ss_pred ccc----CCCCcccEEEEcCcCCC--cCCceEEEEE
Q 015647 347 ELA----SPFDYCDIVTSTTHKSL--RGPRGGIIFF 376 (403)
Q Consensus 347 ~~~----~p~~~aDivt~StHKtL--~GP~GG~I~~ 376 (403)
... .....-.+++.|++|++ .|.+-|+++.
T Consensus 229 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~ 264 (401)
T 7aat_A 229 AWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTV 264 (401)
T ss_dssp THHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred HHHHHHHHhcCCcEEEEecCCcccccccCceEEEEE
Confidence 000 00112457889999987 3444488776
No 181
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.31 E-value=2.2e-11 Score=119.87 Aligned_cols=202 Identities=13% Similarity=0.046 Sum_probs=119.5
Q ss_pred cccceeccC-------ccCcHHHHHHHHH-HhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC------CCCCC
Q 015647 152 KGIELIASE-------NFVCRAVMEALGS-HLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL------DSDNW 217 (403)
Q Consensus 152 ~~l~LiaSe-------n~~~p~V~eA~~s-~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~------~~~~~ 217 (403)
+.|+|..+. .++++.|++++.. .+......+|+. ..|.. + .|+.++++++. +++.
T Consensus 27 ~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~---~~g~~---~----lr~~la~~~~~~~~~~~~~~~- 95 (397)
T 3fsl_A 27 DKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLP---MEGLN---C----YRHAIAPLLFGADHPVLKQQR- 95 (397)
T ss_dssp CCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCC---TTCCH---H----HHHHHHHHHHCTTCHHHHTTC-
T ss_pred CeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCC---CCchH---H----HHHHHHHHHhcCCcccccccc-
Confidence 346766552 2345899999987 664321112221 12221 1 23445555543 2210
Q ss_pred cceE-EeCChHHHHHHHH--hhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec-CCCCCCCCHHHH
Q 015647 218 GVNV-QPYSCTSANFAVY--TGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV-NPQTGYIDYEKL 293 (403)
Q Consensus 218 ~v~V-~~~SGT~An~aal--~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v-d~~~g~ID~d~L 293 (403)
++| ++++|++|+.+++ .+++++||+|++....|.++. ..+...|. +++.+++ +++++.+|+++|
T Consensus 96 -~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~---------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l 163 (397)
T 3fsl_A 96 -VATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHV---------AIFAGAGF--EVSTYPWYDEATNGVRFNDL 163 (397)
T ss_dssp -EEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHH---------HHHHHTTC--CEEEECCEETTTTEECHHHH
T ss_pred -eEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHH---------HHHHHcCC--ceEEEeeeeccCCcCcHHHH
Confidence 034 4556788999884 566899999999887764432 12233443 3445554 123578999999
Q ss_pred HHHhccC--CCcEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccc-cccC--C---CCcccEEEE
Q 015647 294 EEKAMDY--RPKILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAK-ELAS--P---FDYCDIVTS 360 (403)
Q Consensus 294 e~~i~~~--~pklViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g-~~~~--p---~~~aDivt~ 360 (403)
++++++. +++++++...+ +|... ++++|.++|+++|+++++|.+|.-.....+ .... . .....+++.
T Consensus 164 ~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 243 (397)
T 3fsl_A 164 LATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSN 243 (397)
T ss_dssp HHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEe
Confidence 9999853 34566665433 45554 566899999999999999999865432210 0000 0 112457889
Q ss_pred cCcCCCc--CCceEEEEE
Q 015647 361 TTHKSLR--GPRGGIIFF 376 (403)
Q Consensus 361 StHKtL~--GP~GG~I~~ 376 (403)
|++|+++ |.+-|+++.
T Consensus 244 S~SK~~~~~G~riG~~~~ 261 (397)
T 3fsl_A 244 SFSKIFSLYGERVGGLSV 261 (397)
T ss_dssp ECTTTTTCGGGCCEEEEE
T ss_pred cccccccCcCCCeeEEEE
Confidence 9999873 334488875
No 182
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.31 E-value=7e-11 Score=120.00 Aligned_cols=214 Identities=14% Similarity=0.082 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHhhhc-ccceecc-------CccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 015647 138 EIFDIMEKEKQRQFK-GIELIAS-------ENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKA 209 (403)
Q Consensus 138 ei~~li~~e~~rq~~-~l~LiaS-------en~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~l 209 (403)
.|+.+.++-+..... .|+|-.+ +.++.++|.+++....... ..++.+.....|.. + .|+.++++
T Consensus 35 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~-~~~~~~Y~~~~G~~------~-lr~~ia~~ 106 (448)
T 3meb_A 35 AILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDL-SKYNKEYPPVAGFP------L-FLEAAQFL 106 (448)
T ss_dssp TTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCT-TTTCCSCCCTTCCH------H-HHHHHHHH
T ss_pred hHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcc-cCCCCCCCCCcchH------H-HHHHHHHH
Confidence 366666543333322 4665433 3346788888866543110 01111111122321 1 34456665
Q ss_pred c-CCC-----CCCCcceEE--eCChHHHHHH--HHhhhccCCCeEEecCCCCCccccccccCCccchhh----hcccceE
Q 015647 210 F-DLD-----SDNWGVNVQ--PYSCTSANFA--VYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVS----AASIFFE 275 (403)
Q Consensus 210 f-g~~-----~~~~~v~V~--~~SGT~An~a--al~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~----~~g~~~~ 275 (403)
+ |.+ ++. .++ +.+||+|+.. .+.+++.+||+|++....|.++.. .+. ..| ++
T Consensus 107 l~g~~~~~~~~~~---i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~---------~~~~~~~~~G--~~ 172 (448)
T 3meb_A 107 MFGKDSKAAQEGR---IASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYG---------IYDKVFNKLK--VP 172 (448)
T ss_dssp HHCTTCHHHHTTC---EEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHH---------HHHHHHCTTT--SC
T ss_pred hcCCCccccCcCc---EEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHH---------HHHhhHHhCC--Ce
Confidence 5 776 331 233 5678999977 566778999999999988766532 123 334 34
Q ss_pred Eeeeec-CCC-CCCCCHHHHHHHhccC--CCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccc
Q 015647 276 SFPYKV-NPQ-TGYIDYEKLEEKAMDY--RPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAK 346 (403)
Q Consensus 276 vv~~~v-d~~-~g~ID~d~Le~~i~~~--~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g 346 (403)
++.+++ +++ ++.+|+++|++.+++. +++++++...+ +|.+++ +++|+++|+++|+++++|.++..... .+
T Consensus 173 v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~-~~ 251 (448)
T 3meb_A 173 YKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFAT-GS 251 (448)
T ss_dssp CEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSS-SC
T ss_pred EEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccC-CC
Confidence 555665 444 4789999999999753 34566655444 455555 66699999999999999999663221 11
Q ss_pred c----cc-CCC---CcccEEEEcCcCCCc--CCceEEE
Q 015647 347 E----LA-SPF---DYCDIVTSTTHKSLR--GPRGGII 374 (403)
Q Consensus 347 ~----~~-~p~---~~aDivt~StHKtL~--GP~GG~I 374 (403)
. .. ..+ ..-.+++.|++|+++ |-+-|++
T Consensus 252 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l 289 (448)
T 3meb_A 252 FEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCL 289 (448)
T ss_dssp HHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEE
T ss_pred cccCchhHHHHhhcCCcEEEEecccccCCCccccceee
Confidence 0 00 000 112367899999863 3333776
No 183
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.31 E-value=3.1e-11 Score=121.25 Aligned_cols=163 Identities=13% Similarity=0.101 Sum_probs=106.2
Q ss_pred HHHHHHHcCCCCCC------CcceEEe-CChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceE
Q 015647 203 FERALKAFDLDSDN------WGVNVQP-YSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFE 275 (403)
Q Consensus 203 rerla~lfg~~~~~------~~v~V~~-~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~ 275 (403)
.+.+++.+|.+... . -+|++ +++++|+.+++.+++++||+|++....|.+.. ..+...| .+
T Consensus 88 a~~l~~~~g~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---------~~~~~~g--~~ 155 (425)
T 2r2n_A 88 KQLQIKLHNPPTIHYPPSQGQ-MDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTL---------QSLHPLG--CN 155 (425)
T ss_dssp HHHHHHHHCCTTTTSCGGGTC-EEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH---------HHHGGGT--CE
T ss_pred HHHHHHhcCCCCccccccCCc-CcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH---------HHHHHcC--CE
Confidence 34466667875410 0 13544 45688999999999999999999987765432 1223334 35
Q ss_pred EeeeecCCCCCCCCHHHHHHHhcc-----------CCCcEEEEe-CCC--CCccccHH---HHHHHHHHcCCEEEEeccc
Q 015647 276 SFPYKVNPQTGYIDYEKLEEKAMD-----------YRPKILICG-GSS--YPREWDYG---RFRQIADKCGAVLMCDMAH 338 (403)
Q Consensus 276 vv~~~vd~~~g~ID~d~Le~~i~~-----------~~pklViv~-~s~--~g~~~Di~---~I~~Iake~Ga~LivDaAh 338 (403)
++.+++++ . .+|+++|++++++ .++++|++. ..+ +|.+++.+ +|.++|+++|+++++|.+|
T Consensus 156 ~~~v~~~~-~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~ 233 (425)
T 2r2n_A 156 IINVASDE-S-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPY 233 (425)
T ss_dssp EEEECEET-T-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred EEEeCcCC-C-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 55666654 2 3899999999873 357888664 223 46667654 8899999999999999998
Q ss_pred cccccccccccC--CCC--cccEEEEcCcCCCc-CCceEEEEEeCC
Q 015647 339 ISGLIAAKELAS--PFD--YCDIVTSTTHKSLR-GPRGGIIFFRRG 379 (403)
Q Consensus 339 ~~Glia~g~~~~--p~~--~aDivt~StHKtL~-GP~GG~I~~~~~ 379 (403)
..........+. .++ ..++++.|++|+|. |.+.|+++++++
T Consensus 234 ~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~ 279 (425)
T 2r2n_A 234 YFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKP 279 (425)
T ss_dssp GGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHH
T ss_pred ccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHH
Confidence 743221111111 111 24588899999984 223488888764
No 184
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.29 E-value=3.3e-11 Score=117.04 Aligned_cols=189 Identities=11% Similarity=0.027 Sum_probs=120.9
Q ss_pred hcccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHH
Q 015647 151 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTS 228 (403)
Q Consensus 151 ~~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~ 228 (403)
+.-|.|..++++. ++.|++++...+...+ +|+... + .+ .|+++++++|++++ -.++++++|+
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~~---~----~~----lr~~la~~~~~~~~---~i~~t~g~~~ 78 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLNCIR--HYPEPD---A----GT----LRQMLAKRNSVDNN---AILVTNGPTA 78 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGGGGG--SCCCTT---C----HH----HHHHHHHHTTCCGG---GEEEESHHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHhHHh--cCCCCc---H----HH----HHHHHHHHhCcCHH---HEEEcCCHHH
Confidence 4457776665554 8899999887663222 333321 1 12 46678999998764 1344456788
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec-CCCCCCCCHHHHHHHhccCCCcEEEE
Q 015647 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV-NPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v-d~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
|+.+++.++. ||+|++....|.+.. ..+...| .+++.+++ ++ .+.+++ .++++|++
T Consensus 79 al~~~~~~l~--gd~Vi~~~p~~~~~~---------~~~~~~g--~~~~~v~~~~~-~~~~~~---------~~~~~v~i 135 (350)
T 3fkd_A 79 AFYQIAQAFR--GSRSLIAIPSFAEYE---------DACRMYE--HEVCFYPSNED-IGEADF---------SNMDFCWL 135 (350)
T ss_dssp HHHHHHHHTT--TCEEEEEESCCHHHH---------HHHHHTT--CEEEEEETTSC-GGGSCC---------TTCSEEEE
T ss_pred HHHHHHHHHC--CCEEEEeCCCcHHHH---------HHHHHcC--CeEEEEecCCc-cccCcc---------CCCCEEEE
Confidence 9999999887 999999887654432 1223333 45666666 43 233443 36888877
Q ss_pred eCCC--CCccccHHHHHHHHHHcC-CEEEEeccccccccccccccCCCC--cccEEEEcCcCCCc--CCceEEEEEeC
Q 015647 308 GGSS--YPREWDYGRFRQIADKCG-AVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 308 ~~s~--~g~~~Di~~I~~Iake~G-a~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~--GP~GG~I~~~~ 378 (403)
...+ +|.++++++|.+|++.++ .++++|++|+............++ ..++++.|++|+++ |.+.|+++.++
T Consensus 136 ~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~ 213 (350)
T 3fkd_A 136 CNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK 213 (350)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH
T ss_pred eCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH
Confidence 6444 578899999999999886 799999998643221111111111 24588999999874 44568888854
No 185
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.95 E-value=3e-13 Score=133.96 Aligned_cols=193 Identities=15% Similarity=0.168 Sum_probs=119.5
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEe-CChHHHHHHHHhhhcc
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQP-YSCTSANFAVYTGLLL 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~-~SGT~An~aal~all~ 239 (403)
.++.|++++...+... ..+|+. . ..++++...+++++.+| .+.+ .|++ ++|++|+.+++.++++
T Consensus 45 ~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~l~~~la~~l~~~~g~~~~~~----~v~~~~g~~~a~~~~~~~~~~ 111 (392)
T 3b1d_A 45 VMPEVKQAIHDYAEQL-VYGYTY-----A---SDELLQAVLDWEKSEHQYSFDKE----DIVFVEGVVPAISIAIQAFTK 111 (392)
Confidence 4677888887665321 111111 1 23343333334444556 4443 3444 4578899999999999
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC--CCCCHHHHHHHhccCCCcEEEEeCCC--CCcc
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT--GYIDYEKLEEKAMDYRPKILICGGSS--YPRE 315 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~--g~ID~d~Le~~i~~~~pklViv~~s~--~g~~ 315 (403)
+||+|++....|.++.. .+...| .+++.+++++++ ..+|+++|++++++.++++|++...+ +|..
T Consensus 112 ~gd~vl~~~p~~~~~~~---------~~~~~g--~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~ 180 (392)
T 3b1d_A 112 EGEAVLINSPVYPPFAR---------SVRLNN--RKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRV 180 (392)
Confidence 99999998877655431 122223 344555553222 34899999999875567887765433 3455
Q ss_pred c---cHHHHHHHHHHcCCEEEEeccccccccccccccCC--C----CcccEEEEcCcCCC--cCCceEEEEEeCC
Q 015647 316 W---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP--F----DYCDIVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 316 ~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p--~----~~aDivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
. ++++|.++|+++|+++++|.+|............. + ...++++.|++|++ .|.+.|+++++++
T Consensus 181 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 255 (392)
T 3b1d_A 181 WEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP 255 (392)
Confidence 4 48999999999999999999998644321111111 1 12457889999997 4556688887653
No 186
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.28 E-value=4.3e-11 Score=119.90 Aligned_cols=203 Identities=12% Similarity=0.057 Sum_probs=116.5
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc----CCCCCCCcceEEeCC
Q 015647 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF----DLDSDNWGVNVQPYS 225 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf----g~~~~~~~v~V~~~S 225 (403)
+.|+|..++.. .+|.|++++...+.. +..+.....| .......+++ +.+++++ +.+++ .|++++
T Consensus 57 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~y-~~~~g~~~l~----~~ia~~~~~~~~~~~~----~i~~t~ 126 (432)
T 3ei9_A 57 QVISLGIGDTTEPIPEVITSAMAKKAHE-LSTIEGYSGY-GAEQGAKPLR----AAIAKTFYGGLGIGDD----DVFVSD 126 (432)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHHHHH-TTSTTTCCCC-CCTTCCHHHH----HHHHHHHHTTTTCCGG----GEEEES
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhc-ccccCCccCC-CCCCCCHHHH----HHHHHHHHccCCCCcc----eEEECC
Confidence 34666554332 589999999887653 2111111122 1111112333 3455554 66653 455665
Q ss_pred h-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccc----------eEEeeeecCCCC-CCCCHHHH
Q 015647 226 C-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF----------FESFPYKVNPQT-GYIDYEKL 293 (403)
Q Consensus 226 G-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~----------~~vv~~~vd~~~-g~ID~d~L 293 (403)
| ++++.+ +.+++++||+|++....|.++.. .+...+.. .++++++++.++ ...|+++
T Consensus 127 G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 195 (432)
T 3ei9_A 127 GAKCDISR-LQVMFGSNVTIAVQDPSYPAYVD---------SSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST- 195 (432)
T ss_dssp CHHHHHHH-HHHHHCTTCCEEEEESCCTHHHH---------HHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-
T ss_pred ChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHH---------HHHHcCCcccccccccccCceEEeccCcccCCcCChhh-
Confidence 5 556554 67888999999999988765431 11222210 134455554322 2344332
Q ss_pred HHHhccCCCcEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEecccccccccccccc-CCC---CcccEEEEcCcC
Q 015647 294 EEKAMDYRPKILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELA-SPF---DYCDIVTSTTHK 364 (403)
Q Consensus 294 e~~i~~~~pklViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~-~p~---~~aDivt~StHK 364 (403)
..++++|++...+ +|.++ ++++|.++|+++|++|++|.+|+.+........ ..+ ...++++.|++|
T Consensus 196 -----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 270 (432)
T 3ei9_A 196 -----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSN 270 (432)
T ss_dssp -----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHH
T ss_pred -----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchh
Confidence 2467888776444 34555 467777889999999999999986533211100 011 125689999999
Q ss_pred CC--cCCceEEEEEeCCC
Q 015647 365 SL--RGPRGGIIFFRRGK 380 (403)
Q Consensus 365 tL--~GP~GG~I~~~~~~ 380 (403)
+| .|.+.|+++++++.
T Consensus 271 ~~g~~G~r~G~~~~~~~~ 288 (432)
T 3ei9_A 271 YAGFTGVRLGWTVIPKKL 288 (432)
T ss_dssp HHCTTTTCCEEEECCTTC
T ss_pred ccCCcccceEEEEEChHH
Confidence 87 34445999887754
No 187
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.28 E-value=1.4e-11 Score=122.93 Aligned_cols=161 Identities=14% Similarity=0.090 Sum_probs=108.9
Q ss_pred HHHHHHHHcCCCCCCCcceEEeC-ChHHHHH--HHHhhhcc--C---------CCeEEecCCCCCccccccccCCccchh
Q 015647 202 CFERALKAFDLDSDNWGVNVQPY-SCTSANF--AVYTGLLL--P---------GDRIMGLDSPSGGHLSHGYHTPGGKKV 267 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~-SGT~An~--aal~all~--p---------GD~VL~~~~ehgghlsh~~~~~~~~~v 267 (403)
.|+.++++++++++ +|+++ ++++|+. +++.+++. | ||+|++....|.++. ..+
T Consensus 75 lr~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~---------~~~ 141 (423)
T 3ez1_A 75 ARALFAGYLDVKAE----NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHF---------LLL 141 (423)
T ss_dssp HHHHHHHHTTSCGG----GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHH---------HHH
T ss_pred HHHHHHHHhCCChh----hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHH---------HHH
Confidence 46678999998874 45555 5667887 88888887 8 599999887764432 122
Q ss_pred hhcccceEEeeeecCCCCCCCCHHHHHHHhc-cCCCcEEEEeC-CC--CCccccHH---HHHHHH-HHcCCEEEEecccc
Q 015647 268 SAASIFFESFPYKVNPQTGYIDYEKLEEKAM-DYRPKILICGG-SS--YPREWDYG---RFRQIA-DKCGAVLMCDMAHI 339 (403)
Q Consensus 268 ~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~-~~~pklViv~~-s~--~g~~~Di~---~I~~Ia-ke~Ga~LivDaAh~ 339 (403)
...| .++++++++++ + +|+++|+++++ ..++++|++.. .+ +|.+++.+ +|.++| +++|+++++|.+|.
T Consensus 142 ~~~g--~~~~~v~~~~~-g-~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~ 217 (423)
T 3ez1_A 142 QTLG--FELLTVDMQSD-G-PDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYR 217 (423)
T ss_dssp HHHT--CEEEEEEEETT-E-ECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTS
T ss_pred HHcC--CEEEeccCCCC-C-CCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcc
Confidence 3334 45566666643 3 99999999996 34678887642 23 46677666 778888 89999999999988
Q ss_pred cccccc-cccc--CC--------CCcccEEEEcCcCC-CcCCceEEEEEeCC
Q 015647 340 SGLIAA-KELA--SP--------FDYCDIVTSTTHKS-LRGPRGGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~-g~~~--~p--------~~~aDivt~StHKt-L~GP~GG~I~~~~~ 379 (403)
...... +..+ .. ....++++.|++|+ +.|.+.|+++.+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~ 269 (423)
T 3ez1_A 218 VHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSED 269 (423)
T ss_dssp SCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHH
T ss_pred hhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHH
Confidence 533322 1100 00 11256889999995 45666798888753
No 188
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.28 E-value=1e-10 Score=117.43 Aligned_cols=205 Identities=14% Similarity=0.061 Sum_probs=118.8
Q ss_pred ccceeccC--ccC----cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCC
Q 015647 153 GIELIASE--NFV----CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD-SDNWGVNVQPYS 225 (403)
Q Consensus 153 ~l~LiaSe--n~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~-~~~~~v~V~~~S 225 (403)
.|.+.++. +++ +|.|++++...+... .. +...+|. .+...+ .++++++++|.+ .+ -.++++|
T Consensus 44 ~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~-~~-~~~~~~~--~~~~~~----l~~~la~~~~~~~~~---~v~~~~g 112 (419)
T 2eo5_A 44 YLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKL-AH-AAANDFY--NIPQLE----LAKKLVTYSPGNFQK---KVFFSNS 112 (419)
T ss_dssp EEESSGGGGTTTTCBSCCHHHHHHHHHHHTTS-CC-CSCSCSC--CHHHHH----HHHHHHHHSSCSSCE---EEEEESS
T ss_pred EEEccCChhhhccCCCCCHHHHHHHHHHHhhC-cc-ccccccC--CHHHHH----HHHHHHHhCCCCcCC---EEEEeCc
Confidence 35555544 344 799999998876432 11 1111221 222222 235688999986 43 1344567
Q ss_pred hHHHHHHHHhhhcc-CCCeEEecCCCCCccccccccCCccchhhhcc--------c---ceEEeeeecCCCCCC------
Q 015647 226 CTSANFAVYTGLLL-PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS--------I---FFESFPYKVNPQTGY------ 287 (403)
Q Consensus 226 GT~An~aal~all~-pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g--------~---~~~vv~~~vd~~~g~------ 287 (403)
|++||.+++.++.. +||+|++....+.|... . .+...+ . ...++.++++. ...
T Consensus 113 g~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~g~~ 183 (419)
T 2eo5_A 113 GTEAIEASIKVVKNTGRKYIIAFLGGFHGRTF-G-------SISLTASKAVQRSIVGPFMPGVIHVPYPN-PYRNPWHIN 183 (419)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEETTCCCCSSH-H-------HHHHCCSCGGGGCSSCCCCTTEEEECCCC-SSSCTTCCC
T ss_pred hHHHHHHHHHHHHHhhCCcEEEECCCcCCCCH-h-------hHhhcCCccccccccCCCCCCCEEECCCc-ccccccccc
Confidence 99999999987643 48999998866533211 0 011100 0 01223333321 111
Q ss_pred ----------CCHHHHH-HHhcc----CCCcEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccc-cccccc
Q 015647 288 ----------IDYEKLE-EKAMD----YRPKILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAA 345 (403)
Q Consensus 288 ----------ID~d~Le-~~i~~----~~pklViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~ 345 (403)
+|+++|+ +++++ .++++|++.+.+ .|...+ +++|.++|+++|++|++|.+|. +|....
T Consensus 184 ~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~ 263 (419)
T 2eo5_A 184 GYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK 263 (419)
T ss_dssp TTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS
T ss_pred ccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc
Confidence 4788999 88864 245677776543 355566 9999999999999999999997 443221
Q ss_pred ccccCCCC-cccEEEEcCcCCCcCC--ceEEEEEeCC
Q 015647 346 KELASPFD-YCDIVTSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 346 g~~~~p~~-~aDivt~StHKtL~GP--~GG~I~~~~~ 379 (403)
......++ ..|++++ .|+|.++ +-|+++.+++
T Consensus 264 ~~~~~~~~~~~d~~t~--sK~~~~G~~riG~~~~~~~ 298 (419)
T 2eo5_A 264 LFAIENFNTVPDVITL--AKALGGGIMPIGATIFRKD 298 (419)
T ss_dssp SSGGGGGTCCCSEEEE--CGGGGTTTSCCEEEEEEGG
T ss_pred hhhHHhcCCCCCEEEe--cccccCCccceEEEEEchH
Confidence 10001111 3677754 5988652 3388888765
No 189
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.28 E-value=3.5e-11 Score=119.61 Aligned_cols=199 Identities=15% Similarity=0.102 Sum_probs=116.3
Q ss_pred cccceeccC-------ccCcHHHHHHHHH-HhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC------CCCCC
Q 015647 152 KGIELIASE-------NFVCRAVMEALGS-HLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL------DSDNW 217 (403)
Q Consensus 152 ~~l~LiaSe-------n~~~p~V~eA~~s-~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~------~~~~~ 217 (403)
+.|+|..+. .++++.|++++.. .+......+|.. ..|. .+ .|+.++++++. +++.
T Consensus 30 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~---~~g~---~~----lr~~ia~~~~~~~~~~~~~~~- 98 (412)
T 1yaa_A 30 TKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLG---ITGL---PS----LTSNAAKIIFGTQSDALQEDR- 98 (412)
T ss_dssp SCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCC---TTCC---HH----HHHHHHHHHHCTTCHHHHTTC-
T ss_pred CeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCC---CCCc---HH----HHHHHHHHHhcCCCCCCCcce-
Confidence 346665443 2568999999987 654211111110 1122 12 34456666621 2321
Q ss_pred cceEE--eCChHHHHHHH--HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec-CCCCCCCCHHH
Q 015647 218 GVNVQ--PYSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV-NPQTGYIDYEK 292 (403)
Q Consensus 218 ~v~V~--~~SGT~An~aa--l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v-d~~~g~ID~d~ 292 (403)
.++ +.+|++|+.++ +..++.+||+|++....|.++. ..+...| .+++.+++ +++++.+|+++
T Consensus 99 --i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~ 165 (412)
T 1yaa_A 99 --VISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHM---------AIFENQG--LKTATYPYWANETKSLDLNG 165 (412)
T ss_dssp --EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHH---------HHHHTTT--CCEEEEECEETTTTEECHHH
T ss_pred --EEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHH---------HHHHHcC--ceEEEEeeecCCCCccCHHH
Confidence 233 55688899988 3455679999999987765542 1123334 34455555 43356799999
Q ss_pred HHHHhccCC-Cc-EEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEecccccccccc---ccccC-CCC--c----c
Q 015647 293 LEEKAMDYR-PK-ILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAA---KELAS-PFD--Y----C 355 (403)
Q Consensus 293 Le~~i~~~~-pk-lViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~---g~~~~-p~~--~----a 355 (403)
|++++++.+ ++ ++++...+ +|..+ ++++|.++|+++|+++++|.+|....... ...+. .+. . -
T Consensus 166 l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (412)
T 1yaa_A 166 FLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSP 245 (412)
T ss_dssp HHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCC
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcc
Confidence 999987643 24 44435444 35554 46788899999999999999985321110 00000 111 1 2
Q ss_pred cEEEEcCcCCCcCCce---EEEE
Q 015647 356 DIVTSTTHKSLRGPRG---GIIF 375 (403)
Q Consensus 356 Divt~StHKtL~GP~G---G~I~ 375 (403)
++++.|++|++ ||.| |+++
T Consensus 246 ~i~~~s~sK~~-~~~GlriG~~~ 267 (412)
T 1yaa_A 246 VFVCQSFAKNA-GMYGERVGCFH 267 (412)
T ss_dssp EEEEEECTTTS-CCGGGCEEEEE
T ss_pred eEEEeccCCCC-CCcCCcceEEE
Confidence 47788999987 4555 8887
No 190
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.28 E-value=4.2e-11 Score=120.96 Aligned_cols=195 Identities=12% Similarity=0.008 Sum_probs=115.9
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCcc-ccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc--
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARY-YTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL-- 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~-~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~-- 239 (403)
.+|.|++++...+.. +. ..++ ....+...+ .+++++++++.+.+ ..++++||++|+.+++.++..
T Consensus 67 ~~~~v~~a~~~~~~~-~~----~~~~~~~~~~~~~~----l~~~la~~~~~~~~---~v~~~~ggsea~~~al~~~~~~~ 134 (449)
T 3a8u_X 67 TRKEIQEAVAKQLST-LD----YSPGFQYGHPLSFQ----LAEKITDLTPGNLN---HVFFTDSGSECALTAVKMVRAYW 134 (449)
T ss_dssp SCHHHHHHHHHHTTT-CS----CCCSSSCCCHHHHH----HHHHHHTTSSTTEE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-CC----CccccccCCHHHHH----HHHHHHHhCCCCCC---EEEEcCcHHHHHHHHHHHHHHHH
Confidence 379999999877643 21 1121 112232333 34568889976543 234556799999999988764
Q ss_pred ------CCCeEEecCCCCCccccccccCCccchhhhcc------------cceEEeeeecCCCC--CCCC--------HH
Q 015647 240 ------PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS------------IFFESFPYKVNPQT--GYID--------YE 291 (403)
Q Consensus 240 ------pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g------------~~~~vv~~~vd~~~--g~ID--------~d 291 (403)
+||+|++....+.|... ..+...+ ..+..++++..... ..+| ++
T Consensus 135 ~~~g~~~~~~vi~~~~~yhg~~~--------~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~ 206 (449)
T 3a8u_X 135 RLKGQATKTKMIGRARGYHGVNI--------AGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALAD 206 (449)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSH--------HHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCCh--------hhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHH
Confidence 78999997766643321 0111111 01233332211000 0146 99
Q ss_pred HHHHHhcc---CCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEE
Q 015647 292 KLEEKAMD---YRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTS 360 (403)
Q Consensus 292 ~Le~~i~~---~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~ 360 (403)
+|++++++ .++++|++.+. +.|...+ +++|.++|+++|++||+|.+|. +|..........++ ..|++++
T Consensus 207 ~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~ 286 (449)
T 3a8u_X 207 ELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCI 286 (449)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE
T ss_pred HHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEE
Confidence 99999874 24567777654 2566778 9999999999999999999994 65332100000011 2687755
Q ss_pred cCcCCCcC--CceEEEEEeCC
Q 015647 361 TTHKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 361 StHKtL~G--P~GG~I~~~~~ 379 (403)
.|+|.| -+.|+++++++
T Consensus 287 --sK~l~~G~~~~G~~~~~~~ 305 (449)
T 3a8u_X 287 --AKQVTNGAIPMGAVIASTE 305 (449)
T ss_dssp --CGGGGTTSSCCEEEEEEHH
T ss_pred --cccccCCCCceEEEEECHH
Confidence 599875 34566777653
No 191
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.27 E-value=5.3e-11 Score=118.51 Aligned_cols=193 Identities=12% Similarity=0.014 Sum_probs=115.1
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh---hhcc
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT---GLLL 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~---all~ 239 (403)
.+|.|++++...+.. + ++....|+ ..+... ..++.++++++.+..+ -.+++++|++|+.+++. ++.+
T Consensus 58 ~~~~v~~a~~~~~~~-~--~~~~~~~~-~~~~~~----~l~~~la~~~~~~~~~--~v~~~~g~~~a~~~~~~~a~~~~~ 127 (426)
T 1sff_A 58 LHPKVVAAVEAQLKK-L--SHTCFQVL-AYEPYL----ELCEIMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK 127 (426)
T ss_dssp TCHHHHHHHHHHTTT-C--SCCCTTTE-ECHHHH----HHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHh-C--CCcccccc-CCHHHH----HHHHHHHHhCCccccc--EEEEeCchHHHHHHHHHHHHHhhC
Confidence 578899998876643 2 12111122 122222 2466789999322211 13456678999999988 6677
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhccc-------------ceEEeeeecCC--CCCCCCHHHHHHHhcc----C
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI-------------FFESFPYKVNP--QTGYIDYEKLEEKAMD----Y 300 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~-------------~~~vv~~~vd~--~~g~ID~d~Le~~i~~----~ 300 (403)
+| +|++....+.+... ..+...+. .+..++++.+. ..+.+|+++|++++++ .
T Consensus 128 ~~-~vi~~~p~y~~~~~--------~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (426)
T 1sff_A 128 RS-GTIAFSGAYHGRTH--------YTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPE 198 (426)
T ss_dssp CC-EEEEETTCCCCSSH--------HHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGG
T ss_pred CC-eEEEECCCcCCCch--------HhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCC
Confidence 76 78877766533221 01112221 12223333210 1234799999999864 3
Q ss_pred CCcEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc-c-CCCC-cccEEEEcCcCCCcCCce
Q 015647 301 RPKILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL-A-SPFD-YCDIVTSTTHKSLRGPRG 371 (403)
Q Consensus 301 ~pklViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~-~p~~-~aDivt~StHKtL~GP~G 371 (403)
++++|++.+ ++.|...+ +++|.++|+++|++|++|++|+ |+...+.. . ...+ .+|++ |++|+|+ + |
T Consensus 199 ~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~--s~sK~~~-~-G 273 (426)
T 1sff_A 199 DIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLT--TFAKSIA-G-G 273 (426)
T ss_dssp GEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEE--EECGGGG-T-S
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEE--EEccccc-C-C
Confidence 567787754 34565667 9999999999999999999998 54332211 1 1112 26777 4569875 4 5
Q ss_pred ---EEEEEeCC
Q 015647 372 ---GIIFFRRG 379 (403)
Q Consensus 372 ---G~I~~~~~ 379 (403)
|+++++++
T Consensus 274 lriG~~~~~~~ 284 (426)
T 1sff_A 274 FPLAGVTGRAE 284 (426)
T ss_dssp SCCEEEEEEHH
T ss_pred CceEEEEEcHH
Confidence 88888764
No 192
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.27 E-value=3.9e-11 Score=116.18 Aligned_cols=188 Identities=10% Similarity=-0.004 Sum_probs=119.9
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC---CCCCCCcceEEeCChH
Q 015647 153 GIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD---LDSDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg---~~~~~~~v~V~~~SGT 227 (403)
.+.|..+++. .++.|++++...+......+++.. + .. ..|+.++++++ ++++ ..+++++++
T Consensus 21 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~---~~----~lr~~la~~~~~~~~~~~---~v~~~~G~~ 86 (335)
T 1uu1_A 21 KTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS----P---DE----ELIEKILSYLDTDFLSKN---NVSVGNGAD 86 (335)
T ss_dssp SEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS----S---CH----HHHHHHHHHHTCSSCCGG---GEEEESSHH
T ss_pred ceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----c---hH----HHHHHHHHHcCCCCCCHH---HEEEcCChH
Confidence 4666666663 589999998876522111122110 1 12 24667889999 6653 123445678
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015647 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
+|+.+++.++ ||+|++. ..|.+.. ..+...| .+++.+++++ ++.+|++++ .++++|++
T Consensus 87 ~al~~~~~~~---gd~Vl~~-p~y~~~~---------~~~~~~g--~~~~~v~~~~-~~~~d~~~l------~~~~~v~l 144 (335)
T 1uu1_A 87 EIIYVMMLMF---DRSVFFP-PTYSCYR---------IFAKAVG--AKFLEVPLTK-DLRIPEVNV------GEGDVVFI 144 (335)
T ss_dssp HHHHHHHHHS---SEEEECS-SSCHHHH---------HHHHHHT--CEEEECCCCT-TSCCCCCCC------CTTEEEEE
T ss_pred HHHHHHHHHh---CCcEEEC-CCcHHHH---------HHHHHcC--CeEEEeccCC-CCCCCHHHc------CCCCEEEE
Confidence 8999999887 8999988 7764432 1123334 3555666653 456888776 35788876
Q ss_pred eCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCc--CCceEEEEEeCC
Q 015647 308 GGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 308 ~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~--GP~GG~I~~~~~ 379 (403)
..++ +|.+++.++|.+|++.+| ++++|++|+... ...... .++ ..++++.|++|+++ |.+.|+++++++
T Consensus 145 ~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~-~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 219 (335)
T 1uu1_A 145 PNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFH-GESYVD-FLKKYENLAVIRTFSKAFSLAAQRVGYVVASEK 219 (335)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHH-CCCCGG-GGGTCSSEEEEEESTTTTTCGGGCCEEEEECHH
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhc-chhHHH-HhhhCCCEEEEecchhhcCCcccCeEEEEeCHH
Confidence 5433 467899999999999999 999999998422 111111 011 25789999999873 334599988653
No 193
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.26 E-value=1.1e-10 Score=115.37 Aligned_cols=193 Identities=15% Similarity=0.071 Sum_probs=113.4
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc----
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL---- 238 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all---- 238 (403)
.+|.|++++...+.. +. +...++ ..+...++ ++++++++|.+. .++++||++||.+++.++.
T Consensus 53 ~~p~v~~a~~~~~~~-~~--~~~~~~--~~~~~~~l----~~~la~~~~~~~-----v~~~~gg~ea~~~al~~~~~~~~ 118 (395)
T 3nx3_A 53 NHAKFNAKIKAQVDK-LL--HTSNLY--YNENIAAA----AKNLAKASALER-----VFFTNSGTESIEGAMKTARKYAF 118 (395)
T ss_dssp SCHHHHHHHHHHHTT-CS--CCCTTS--BCHHHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cc--cccccc--CCHHHHHH----HHHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 378999998877643 21 111222 23333333 456888888543 4667789999999998775
Q ss_pred ---cCCCeEEecCCCCCccccccccCCccchhhhc---ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC--
Q 015647 239 ---LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA---SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS-- 310 (403)
Q Consensus 239 ---~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~---g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s-- 310 (403)
.++|+|++....+.|..... ....+...... .....+..++ ..|+++|+++++ .++++|++...
T Consensus 119 ~~g~~~~~vi~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~-~~~~~v~~~~~~~ 190 (395)
T 3nx3_A 119 NKGVKGGQFIAFKHSFHGRTLGA-LSLTANEKYQKPFKPLISGVKFAK------YNDISSVEKLVN-EKTCAIILESVQG 190 (395)
T ss_dssp HTTCTTCEEEEETTCCCCSSHHH-HTTCCCHHHHGGGCSCCSCEEEEC------TTCHHHHHTTCC-TTEEEEEEESEEC
T ss_pred ccCCCCCEEEEEcCCcCCCCHHH-HhhcCCcccccccCCCCCCcEEeC------CCCHHHHHHhcc-CCeEEEEEeCccC
Confidence 35799999887764432100 00000000000 0001122222 238999999886 35677777643
Q ss_pred CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015647 311 SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 311 ~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
+.|...+ +++|+++|+++|++||+|.+|. +|..........++ ..|++++| |+|.+ .+.|+++.+++
T Consensus 191 ~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~s--K~~~~G~~~G~~~~~~~ 264 (395)
T 3nx3_A 191 EGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSA--KALGCGLSVGAFVINQK 264 (395)
T ss_dssp TTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGTTTSCCEEEEECHH
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEec--ccccCCCceEEEEEchh
Confidence 3345555 9999999999999999999987 44322111111112 26787765 88754 45588887764
No 194
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.26 E-value=8.9e-11 Score=116.14 Aligned_cols=185 Identities=16% Similarity=0.067 Sum_probs=115.5
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc---
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL--- 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~--- 239 (403)
.+|.|++++...+.. +. +.+..| ..+...+ .++++++++|.+. .++++||++|+.+++.++..
T Consensus 57 ~~~~v~~a~~~~~~~-~~--~~~~~~--~~~~~~~----l~~~la~~~g~~~-----v~~~~gg~~a~~~al~~~~~~~~ 122 (397)
T 2ord_A 57 SHPRLVEAIKDQAEK-LI--HCSNLF--WNRPQME----LAELLSKNTFGGK-----VFFANTGTEANEAAIKIARKYGK 122 (397)
T ss_dssp TCHHHHHHHHHHHHH-CS--CCCTTS--EEHHHHH----HHHHHHHTTTSCE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cc--cCcccc--CCHHHHH----HHHHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 378999999887654 32 222222 2333333 3456889998543 35667899999999988753
Q ss_pred ---C-CCeEEecCCCCCccccccccCCccchhhhcccc-----e-----EEeeeecCCCCCCCCHHHHHHHhccCCCcEE
Q 015647 240 ---P-GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----F-----ESFPYKVNPQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 240 ---p-GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~-----~vv~~~vd~~~g~ID~d~Le~~i~~~~pklV 305 (403)
+ +|+|++....+.+... ..+...+.. + .+..+++ .|+++|++++++ ++++|
T Consensus 123 ~~~~~~~~vi~~~~~yh~~~~--------~~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~l~~-~~~~v 187 (397)
T 2ord_A 123 KKSEKKYRILSAHNSFHGRTL--------GSLTATGQPKYQKPFEPLVPGFEYFEF------NNVEDLRRKMSE-DVCAV 187 (397)
T ss_dssp HHCTTCCEEEEEBTCCCCSSH--------HHHHHSBCHHHHGGGCSCCTTEEEECT------TCHHHHHHHCCT-TEEEE
T ss_pred cCCCCCceEEEEcCCcCCCch--------hhhhccCChhhccccCCCCCCeeEecC------CCHHHHHHHhhc-CeEEE
Confidence 5 4788887655533211 012222221 0 0233322 489999999874 68888
Q ss_pred EEeCCC--CCc----cccHHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-cccEEEEcCcCCCcCC-ceEEEE
Q 015647 306 ICGGSS--YPR----EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCDIVTSTTHKSLRGP-RGGIIF 375 (403)
Q Consensus 306 iv~~s~--~g~----~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aDivt~StHKtL~GP-~GG~I~ 375 (403)
++...+ +|. ..++++|.++|+++|++|++|++|+ |+...+... ..++ ..|++++ +|+|.++ +.|+++
T Consensus 188 ~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G~r~G~~~ 264 (397)
T 2ord_A 188 FLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGKLFAYQKYGVVPDVLTT--AKGLGGGVPIGAVI 264 (397)
T ss_dssp EECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEE
T ss_pred EEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCccchhhhhhCCCCCeeee--ccccCCCcCeEEEE
Confidence 886543 354 3589999999999999999999996 653322110 0111 2687754 7998743 457887
Q ss_pred EeCC
Q 015647 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
++++
T Consensus 265 ~~~~ 268 (397)
T 2ord_A 265 VNER 268 (397)
T ss_dssp ECST
T ss_pred EchH
Confidence 7765
No 195
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.26 E-value=5e-11 Score=123.38 Aligned_cols=197 Identities=13% Similarity=0.030 Sum_probs=119.6
Q ss_pred CccCcHHHHHHHHHHhhhcCC---CCCCCCccccchHHHHHHHHHHHHHHHHHcC-C--CCCCCcceEEeCChHHHHHHH
Q 015647 160 ENFVCRAVMEALGSHLTNKYS---EGYPGARYYTGNQYIDQIENLCFERALKAFD-L--DSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 160 en~~~p~V~eA~~s~l~~~y~---eG~pgsr~~~G~~~~~~lE~~arerla~lfg-~--~~~~~~v~V~~~SGT~An~aa 233 (403)
.+..+..+.+++...+..... .+|+. ..|.. .+.+...+.+.+..| . +++ -.++++++++|+.++
T Consensus 99 ~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~gG~~~~~~---~i~~t~G~~~ai~~~ 169 (498)
T 3ihj_A 99 SPSFPEDAKKRARRILQACGGNSLGSYSA---SQGVN---CIREDVAAYITRRDGGVPADPD---NIYLTTGASDGISTI 169 (498)
T ss_dssp CSSSCHHHHHHHHHHHHHC-------------CCSCH---HHHHHHHHHHHHHTTTCCCCGG---GEEEESSHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHhccCCCCCCCCC---CCCHH---HHHHHHHHHHHHhcCCCCCCcc---cEEEcCCHHHHHHHH
Confidence 445666677766655543210 11111 12332 222222234555553 3 343 134455678899999
Q ss_pred HhhhccCCC----eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccC----CCcE
Q 015647 234 YTGLLLPGD----RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDY----RPKI 304 (403)
Q Consensus 234 l~all~pGD----~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~----~pkl 304 (403)
+.+++++|| +|++..+.|.... ..+...| .++++|+++++ +..+|+++|++++++. ++|+
T Consensus 170 ~~~l~~~gd~~~d~Vlv~~p~y~~~~---------~~~~~~g--~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~ 238 (498)
T 3ihj_A 170 LKILVSGGGKSRTGVMIPIPQYPLYS---------AVISELD--AIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKV 238 (498)
T ss_dssp HHHHCCCCGGGSEEEEEEESCCTHHH---------HHHHHTT--CEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHcCCCCCCCCEEEEeCCCchhHH---------HHHHHcC--CEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeE
Confidence 999999876 9999987765432 1233334 45667777643 3479999999999764 4788
Q ss_pred EEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCCCCc------------cc-EEEEcCcCCC
Q 015647 305 LICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDY------------CD-IVTSTTHKSL 366 (403)
Q Consensus 305 Viv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~------------aD-ivt~StHKtL 366 (403)
|++...++ |.+. ++++|.++|+++|+++++|.+|.......+....++.. .. +++.|++|++
T Consensus 239 i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 318 (498)
T 3ihj_A 239 LCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGY 318 (498)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSST
T ss_pred EEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEecccccc
Confidence 77654444 4454 47778999999999999999987754432211111110 11 5678999998
Q ss_pred c---CCceEEEEE
Q 015647 367 R---GPRGGIIFF 376 (403)
Q Consensus 367 ~---GP~GG~I~~ 376 (403)
. |-++|+++.
T Consensus 319 ~G~~G~R~G~~~~ 331 (498)
T 3ihj_A 319 MGECGYRGGYMEV 331 (498)
T ss_dssp TCCSSSCCEEEEE
T ss_pred ccCcccceEEEEE
Confidence 3 667798874
No 196
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.26 E-value=7.8e-11 Score=116.06 Aligned_cols=200 Identities=16% Similarity=0.167 Sum_probs=119.5
Q ss_pred cccceeccC----c---cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc-CC--CCCCCcceE
Q 015647 152 KGIELIASE----N---FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF-DL--DSDNWGVNV 221 (403)
Q Consensus 152 ~~l~LiaSe----n---~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf-g~--~~~~~~v~V 221 (403)
..|+|..+. + ++++.|++++...+......+|+. ..|. .+ .|+.+++++ +. +++ .|
T Consensus 27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~----lr~~la~~~~~~~~~~~----~v 92 (394)
T 2ay1_A 27 GKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAG---LSGE---PE----FQKAMGELILGDGLKSE----TT 92 (394)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCC---SSCC---HH----HHHHHHHHHHGGGCCGG----GE
T ss_pred cccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCC---CCCc---HH----HHHHHHHHHhCCCCCcc----cE
Confidence 346666554 1 457999999887654311112211 1121 12 344566665 44 332 24
Q ss_pred E---eCChHHHHHHHHhhhcc--CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHH
Q 015647 222 Q---PYSCTSANFAVYTGLLL--PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEE 295 (403)
Q Consensus 222 ~---~~SGT~An~aal~all~--pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~ 295 (403)
+ +.+|++|+.+++.++.. +||+|++....|.+.. ..+...|. +++.+++++ +++.+|++++++
T Consensus 93 ~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~---------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~ 161 (394)
T 2ay1_A 93 ATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHV---------SIMNFMGL--PVQTYRYFDAETRGVDFEGMKA 161 (394)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHH---------HHHHHHTC--CEEEEECEETTTTEECHHHHHH
T ss_pred EEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHH---------HHHHHcCC--ceEEEecccccCCccCHHHHHH
Confidence 4 55789999999887754 9999999887764432 12233343 344455421 246799999999
Q ss_pred HhccCC--CcEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEecccccccccc--cccc-CCCC--c-ccEEEEcC
Q 015647 296 KAMDYR--PKILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAA--KELA-SPFD--Y-CDIVTSTT 362 (403)
Q Consensus 296 ~i~~~~--pklViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~--g~~~-~p~~--~-aDivt~St 362 (403)
++++.+ ++++++...+ +|..+ ++++|.++|+++|+++++|++|....... +..+ ..+. . ..+++.|+
T Consensus 162 ~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 241 (394)
T 2ay1_A 162 DLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASC 241 (394)
T ss_dssp HHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred HHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEec
Confidence 997542 4555555444 35555 46688999999999999999988543210 0000 0111 1 23678899
Q ss_pred cCCCc--CCceEEEEE
Q 015647 363 HKSLR--GPRGGIIFF 376 (403)
Q Consensus 363 HKtL~--GP~GG~I~~ 376 (403)
+|+++ |.+-|++++
T Consensus 242 sK~~~~~G~riG~~~~ 257 (394)
T 2ay1_A 242 SKNFGIYRERTGCLLA 257 (394)
T ss_dssp TTTTTCGGGCEEEEEE
T ss_pred cCCCcCcCCccceEEE
Confidence 99873 334488887
No 197
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.26 E-value=2.9e-11 Score=126.29 Aligned_cols=149 Identities=17% Similarity=0.149 Sum_probs=98.1
Q ss_pred eEEe-CChHHHHHHHHhh-----hccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecC-CCCCCCCHHH
Q 015647 220 NVQP-YSCTSANFAVYTG-----LLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVN-PQTGYIDYEK 292 (403)
Q Consensus 220 ~V~~-~SGT~An~aal~a-----ll~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd-~~~g~ID~d~ 292 (403)
.|++ .+||+|+.+++.+ ++++||+|++....|.++.. .+...+..+..+++..+ ..++.+|+++
T Consensus 166 ~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~---------~~~~~g~~~~~v~~~~~~~~~~~~d~~~ 236 (533)
T 3f6t_A 166 DLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLR---------IPELKDYELVEVDLHSYEKNDWEIEPNE 236 (533)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHT---------SGGGGGSEEEEECCCEETTTTSEECHHH
T ss_pred eEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHH---------HHHHcCCeEEEEEecCCcccCCCCCHHH
Confidence 3444 4578899999988 78999999999988755431 12333433333333321 2356799999
Q ss_pred HHHHhccCCCcEEEEeCCC--CCccccHH---HHHHHHH-HcCCEEEEecccccccccccc-ccCCCCcccEEEEcCcCC
Q 015647 293 LEEKAMDYRPKILICGGSS--YPREWDYG---RFRQIAD-KCGAVLMCDMAHISGLIAAKE-LASPFDYCDIVTSTTHKS 365 (403)
Q Consensus 293 Le~~i~~~~pklViv~~s~--~g~~~Di~---~I~~Iak-e~Ga~LivDaAh~~Glia~g~-~~~p~~~aDivt~StHKt 365 (403)
|++++.. ++++|++...+ +|.+.+.+ +|.++|+ ++|+++++|.+|.. +..... ........++++.|++|+
T Consensus 237 l~~~l~~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~i~~~S~SK~ 314 (533)
T 3f6t_A 237 IEKLKDP-SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGA-FVPNFKSIYSVVPYNTMLVYSYSKL 314 (533)
T ss_dssp HHHHSCT-TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGG-GSTTCCCHHHHSGGGEEEEEESHHH
T ss_pred HHHHhCC-CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccc-cccCccCHhhcCCCCEEEEecCccc
Confidence 9999864 67888775443 45666655 7778888 68999999999873 322110 000001255999999998
Q ss_pred Cc--CCceEEEEEeCC
Q 015647 366 LR--GPRGGIIFFRRG 379 (403)
Q Consensus 366 L~--GP~GG~I~~~~~ 379 (403)
++ |-+.|++++++.
T Consensus 315 ~g~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 315 FGCTGWRLGVIALNEK 330 (533)
T ss_dssp HTCGGGCEEEEEEESS
T ss_pred CCCcccceEEEEECcH
Confidence 63 344599998876
No 198
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.25 E-value=1.6e-10 Score=113.80 Aligned_cols=200 Identities=16% Similarity=0.076 Sum_probs=119.4
Q ss_pred cccceeccC-------ccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC------CCCCCc
Q 015647 152 KGIELIASE-------NFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL------DSDNWG 218 (403)
Q Consensus 152 ~~l~LiaSe-------n~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~------~~~~~~ 218 (403)
..|+|..+. .+.++.|++++...+......+|.. ..|. .+ .|+.++++++. +++.
T Consensus 27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~----lr~~la~~~~~~~~~~~~~~~-- 94 (396)
T 2q7w_A 27 GKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLG---IDGI---PE----FGRCTQELLFGKGSALINDKR-- 94 (396)
T ss_dssp -CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCC---TTCC---HH----HHHHHHHHHHCTTCHHHHTTC--
T ss_pred CceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCC---CCCC---HH----HHHHHHHHHhcCCCCcccccc--
Confidence 456666554 1457999999887654321111210 1121 12 34456666621 2321
Q ss_pred ceEE--eCChHHHHHHHHhhh--ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHH
Q 015647 219 VNVQ--PYSCTSANFAVYTGL--LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKL 293 (403)
Q Consensus 219 v~V~--~~SGT~An~aal~al--l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~L 293 (403)
+ ++ +.+|++|+.+++.++ +.+||+|++....|.++. ..+...| .+++.+++++ +++.+|+++|
T Consensus 95 v-~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~d~~~l 162 (396)
T 2q7w_A 95 A-RTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHK---------SVFNSAG--LEVREYAYYDAENHTLDFDAL 162 (396)
T ss_dssp E-EEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHH---------HHHHHTT--CEEEEEECEETTTTEECHHHH
T ss_pred E-EEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHH---------HHHHHcC--CceEEEecccCCCCCcCHHHH
Confidence 2 33 567889999998765 469999999887765542 1223334 3455555531 2467999999
Q ss_pred HHHhccCC--CcEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEecccccccccc--cccc-CCCC---cccEEEE
Q 015647 294 EEKAMDYR--PKILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAA--KELA-SPFD---YCDIVTS 360 (403)
Q Consensus 294 e~~i~~~~--pklViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~--g~~~-~p~~---~aDivt~ 360 (403)
++++.+.+ ++++++...+ +|..+ ++++|.++|+++|+++++|.+|....... ...+ ..+. ..++++.
T Consensus 163 ~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 242 (396)
T 2q7w_A 163 INSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVAS 242 (396)
T ss_dssp HHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEE
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEE
Confidence 99997542 4566655444 35554 46789999999999999999987532211 0000 0011 1357789
Q ss_pred cCcCCCcCCce---EEEEE
Q 015647 361 TTHKSLRGPRG---GIIFF 376 (403)
Q Consensus 361 StHKtL~GP~G---G~I~~ 376 (403)
|++|++ |+.| |+++.
T Consensus 243 s~sK~~-~~~G~riG~~~~ 260 (396)
T 2q7w_A 243 SYSXNF-GLYNERVGACTL 260 (396)
T ss_dssp ECTTTT-TCGGGCCEEEEE
T ss_pred eccccc-cccccccceEEE
Confidence 999987 4444 88886
No 199
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.24 E-value=8.8e-11 Score=117.64 Aligned_cols=161 Identities=11% Similarity=-0.039 Sum_probs=108.9
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCC-hHHHH--HHHHhhhcc--C----------CCeEEecCCCCCccccccccCCccch
Q 015647 202 CFERALKAFDLDSDNWGVNVQPYS-CTSAN--FAVYTGLLL--P----------GDRIMGLDSPSGGHLSHGYHTPGGKK 266 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~S-GT~An--~aal~all~--p----------GD~VL~~~~ehgghlsh~~~~~~~~~ 266 (403)
.|+.++++++++++ +|++++ +++|+ .+++.+++. | ||+|++....|.++. ..
T Consensus 83 lr~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~---------~~ 149 (427)
T 3ppl_A 83 IRQIWADLLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHF---------SI 149 (427)
T ss_dssp HHHHHHHHHTSCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH---------HH
T ss_pred HHHHHHHHhCCCcc----eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHH---------HH
Confidence 46678899998874 455555 56688 478888877 6 999999887765432 12
Q ss_pred hhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC-CC--CCccccHH---HHHHHH-HHcCCEEEEecccc
Q 015647 267 VSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG-SS--YPREWDYG---RFRQIA-DKCGAVLMCDMAHI 339 (403)
Q Consensus 267 v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~-s~--~g~~~Di~---~I~~Ia-ke~Ga~LivDaAh~ 339 (403)
+...| ++++++++++ .+ +|+++|+++++..++++|++.. .+ +|.+++.+ +|.++| +++|+++|+|.+|.
T Consensus 150 ~~~~g--~~~~~v~~~~-~g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~ 225 (427)
T 3ppl_A 150 TERFG--FEMISVPMNE-DG-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYA 225 (427)
T ss_dssp HHHTT--CEEEEEEEET-TE-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTT
T ss_pred HHHcC--CEEEEeCCCC-CC-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCc
Confidence 23334 4566667765 34 9999999999655788887653 23 46677766 778888 89999999999987
Q ss_pred ccccccccc-cCC---------CCcccEEEEcCcCCC-cCCceEEEEEeCC
Q 015647 340 SGLIAAKEL-ASP---------FDYCDIVTSTTHKSL-RGPRGGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~-~~p---------~~~aDivt~StHKtL-~GP~GG~I~~~~~ 379 (403)
......... +.. ....++++.|++|++ .|.+.|+++.+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~ 276 (427)
T 3ppl_A 226 VHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAE 276 (427)
T ss_dssp TCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHH
T ss_pred ccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHH
Confidence 533221110 000 112568899999974 3445588887653
No 200
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.22 E-value=2.7e-10 Score=113.06 Aligned_cols=214 Identities=10% Similarity=0.025 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHh-hhcccceeccC-------ccCcHHHHHHHHHHhhhc-CCCCCCCCccccchHHHHHHHHHHHHHHHH
Q 015647 138 EIFDIMEKEKQR-QFKGIELIASE-------NFVCRAVMEALGSHLTNK-YSEGYPGARYYTGNQYIDQIENLCFERALK 208 (403)
Q Consensus 138 ei~~li~~e~~r-q~~~l~LiaSe-------n~~~p~V~eA~~s~l~~~-y~eG~pgsr~~~G~~~~~~lE~~arerla~ 208 (403)
.+..+...-... ....++|..+. .++++.|.+++...+... ...+|.. ..|. .+ .|+.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~---~~g~---~~----lr~~la~ 85 (412)
T 1ajs_A 16 LVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLP---ILGL---AE----FRTCASR 85 (412)
T ss_dssp HHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCC---TTCC---HH----HHHHHHH
T ss_pred hHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCC---CCCC---HH----HHHHHHH
Confidence 455555443222 23456666554 245689999988765221 1111110 1121 12 3555777
Q ss_pred Hc-CC-----CCCCCcceEE--eCChHHHHHHHHh--hhccCC-----CeEEecCCCCCccccccccCCccchhhhcccc
Q 015647 209 AF-DL-----DSDNWGVNVQ--PYSCTSANFAVYT--GLLLPG-----DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF 273 (403)
Q Consensus 209 lf-g~-----~~~~~~v~V~--~~SGT~An~aal~--all~pG-----D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~ 273 (403)
++ +. +++. .++ +.+|++|+.+++. .++.+| |+|++....|.++. ..+...|.
T Consensus 86 ~~~~~~~~~~~~~~---v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~---------~~~~~~g~- 152 (412)
T 1ajs_A 86 LALGDDSPALQEKR---VGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHN---------GVFTTAGF- 152 (412)
T ss_dssp HHHCTTCHHHHTTC---EEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHH---------HHHHHTTC-
T ss_pred HHhcCCCCccCCCc---EEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHH---------HHHHHcCC-
Confidence 77 43 3321 233 5578999999854 556899 99999988775542 12233343
Q ss_pred eE-EeeeecCC-CCCCCCHHHHHHHhccC--CCcEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccc
Q 015647 274 FE-SFPYKVNP-QTGYIDYEKLEEKAMDY--RPKILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIA 344 (403)
Q Consensus 274 ~~-vv~~~vd~-~~g~ID~d~Le~~i~~~--~pklViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia 344 (403)
+ ++.+++++ +++.+|+++|++++.+. ++++|++...+ +|..+ ++++|.++|+++|++|++|.+|......
T Consensus 153 -~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~ 231 (412)
T 1ajs_A 153 -KDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASG 231 (412)
T ss_dssp -SCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTS
T ss_pred -ceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCC
Confidence 3 44444421 35679999999998764 34566555444 34554 5678999999999999999996532111
Q ss_pred c---cccc-CCCC---cccEEEEcCcCCCcCCce---EEEEE
Q 015647 345 A---KELA-SPFD---YCDIVTSTTHKSLRGPRG---GIIFF 376 (403)
Q Consensus 345 ~---g~~~-~p~~---~aDivt~StHKtL~GP~G---G~I~~ 376 (403)
. .... ..+. .-.+++.|++|++ |+.| |++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~ 272 (412)
T 1ajs_A 232 NLEKDAWAIRYFVSEGFELFCAQSFSKNF-GLYNERVGNLTV 272 (412)
T ss_dssp CHHHHTHHHHHHHHTTCCEEEEEECTTTS-CCGGGCEEEEEE
T ss_pred cccccchHHHHHhccCCcEEEEEeccccc-CCCCcceEEEEE
Confidence 0 0000 0011 1238899999987 4444 88887
No 201
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.20 E-value=3.3e-11 Score=119.47 Aligned_cols=164 Identities=13% Similarity=0.039 Sum_probs=96.7
Q ss_pred HHHHHHHc------CCCCCCCcceEEeCChHHHHHHHHhhhccCCC-----eEEec-CCCCCccccccccCCccchh-hh
Q 015647 203 FERALKAF------DLDSDNWGVNVQPYSCTSANFAVYTGLLLPGD-----RIMGL-DSPSGGHLSHGYHTPGGKKV-SA 269 (403)
Q Consensus 203 rerla~lf------g~~~~~~~v~V~~~SGT~An~aal~all~pGD-----~VL~~-~~ehgghlsh~~~~~~~~~v-~~ 269 (403)
|+.+++++ +++++ -.+++++||+|+.+++.+++++|| +|+++ ...|.++.... ... ..
T Consensus 81 r~~ia~~~~~~~g~~~~~~---~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~------~~~~~~ 151 (417)
T 3g7q_A 81 LNALAVLLRETLGWDIEPQ---NIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSG------LEDDLF 151 (417)
T ss_dssp HHHHHHHHHHHHCCCCCGG---GEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----------CCE
T ss_pred HHHHHHHHHHHhCCCCCcc---cEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhc------cchhhh
Confidence 44455554 45553 134455789999999999999988 89886 66654432110 000 01
Q ss_pred cccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccc
Q 015647 270 ASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIA 344 (403)
Q Consensus 270 ~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia 344 (403)
.+....+..++.+..+..+|+++|+ +. .++++|++...+ +|.+++ +++|.++|+++|+++++|++|......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~ 228 (417)
T 3g7q_A 152 VSARPNIELLPEGQFKYHVDFEHLH--IG-EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG 228 (417)
T ss_dssp EECCCEEEEEGGGEEEEECCGGGCC--CC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC
T ss_pred ccccCcccccCCcccccccCHHHhc--cc-cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc
Confidence 1122233333322112358899887 43 357887775444 466777 888999999999999999999753211
Q ss_pred ccccc-CC-CCcccEEEEcCcCCC-cCCceEEEEEeC
Q 015647 345 AKELA-SP-FDYCDIVTSTTHKSL-RGPRGGIIFFRR 378 (403)
Q Consensus 345 ~g~~~-~p-~~~aDivt~StHKtL-~GP~GG~I~~~~ 378 (403)
..... .+ ....++++.|++|++ .|-+.|+++.++
T Consensus 229 ~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 265 (417)
T 3g7q_A 229 IIFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIAND 265 (417)
T ss_dssp CBCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECCH
T ss_pred ccccccccCCCCCEEEEEechhccCCCcceEEEEeCH
Confidence 11101 11 123678899999952 223348888754
No 202
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.20 E-value=6.3e-11 Score=118.83 Aligned_cols=220 Identities=13% Similarity=0.021 Sum_probs=127.2
Q ss_pred CCCCChHHHHHHHHHHHhhhcccceeccCcc-----CcHHHHHHHHHHhh--hc-CCCCCCCCccccchHHHHHHHHHHH
Q 015647 132 LPLADPEIFDIMEKEKQRQFKGIELIASENF-----VCRAVMEALGSHLT--NK-YSEGYPGARYYTGNQYIDQIENLCF 203 (403)
Q Consensus 132 l~~~d~ei~~li~~e~~rq~~~l~LiaSen~-----~~p~V~eA~~s~l~--~~-y~eG~pgsr~~~G~~~~~~lE~~ar 203 (403)
|......++..+.+-+ .+...|+|-.+++. .++.+++++...+. .. ...+|+.. .|. + ..|
T Consensus 14 l~~~~~~~~~~~~~l~-~~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~---~G~------~-~lr 82 (422)
T 3d6k_A 14 LAQVREEVTAKYAELK-AKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGL---LGI------A-DIR 82 (422)
T ss_dssp ----CHHHHHHHHHHH-HTTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCS---SCC------H-HHH
T ss_pred HHhhHHHHHHHHHHHh-ccCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCC---CCC------H-HHH
Confidence 3444556666554432 23446777766662 23456665543210 00 01112111 122 1 246
Q ss_pred HHHHHHcCCCCCCCcceEEeCCh-HHHH--HHHHhhhccC------------CCeEEecCCCCCccccccccCCccchhh
Q 015647 204 ERALKAFDLDSDNWGVNVQPYSC-TSAN--FAVYTGLLLP------------GDRIMGLDSPSGGHLSHGYHTPGGKKVS 268 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SG-T~An--~aal~all~p------------GD~VL~~~~ehgghlsh~~~~~~~~~v~ 268 (403)
+.++++++++++ +|++++| ++++ .+++.++.++ +|+|++....|.+.. ..+.
T Consensus 83 ~~ia~~~~~~~~----~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~---------~~~~ 149 (422)
T 3d6k_A 83 ELWAEALGLPAD----LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHF---------TITE 149 (422)
T ss_dssp HHHHHHHTCCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH---------HHHH
T ss_pred HHHHHHhCCChh----HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHH---------HHHH
Confidence 678889998864 4666654 5576 5666677665 347998887764432 1223
Q ss_pred hcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE-eCCC--CCccccHH---HHHHHHH-HcCCEEEEeccccc-
Q 015647 269 AASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC-GGSS--YPREWDYG---RFRQIAD-KCGAVLMCDMAHIS- 340 (403)
Q Consensus 269 ~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv-~~s~--~g~~~Di~---~I~~Iak-e~Ga~LivDaAh~~- 340 (403)
..| .+++++++++ ++ +|+++|++++++.++|+|++ ...+ +|.+++.+ +|.++|+ ++|+++++|.+|+.
T Consensus 150 ~~g--~~~~~v~~~~-~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~ 225 (422)
T 3d6k_A 150 HFG--FEMINVPMTD-EG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALH 225 (422)
T ss_dssp HHT--CEEEEEEEET-TE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTC
T ss_pred HcC--CEEEecCCCC-CC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCcccc
Confidence 334 4556666664 34 99999999997656788774 3333 46677766 6777777 89999999999984
Q ss_pred cccccccccCCC---------CcccEEEEcCcCC-CcCCceEEEEEeCC
Q 015647 341 GLIAAKELASPF---------DYCDIVTSTTHKS-LRGPRGGIIFFRRG 379 (403)
Q Consensus 341 Glia~g~~~~p~---------~~aDivt~StHKt-L~GP~GG~I~~~~~ 379 (403)
++...+....++ ...++++.|++|+ +.|.+.|+++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~ 274 (422)
T 3d6k_A 226 TLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKE 274 (422)
T ss_dssp BSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHH
T ss_pred ccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHH
Confidence 332221101111 1256889999996 23445699987653
No 203
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.20 E-value=1.8e-10 Score=115.87 Aligned_cols=194 Identities=16% Similarity=0.084 Sum_probs=111.6
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCC-CCCcceEEeCChHHHHHHHHhhh--cc
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDS-DNWGVNVQPYSCTSANFAVYTGL--LL 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~-~~~~v~V~~~SGT~An~aal~al--l~ 239 (403)
.+|.|++++...+.. +. .+...++ -.+...+ .+++++++++... + -.++++||++||.+++.++ +.
T Consensus 60 ~~p~v~~a~~~~~~~-~~-~~~~~~~--~~~~~~~----l~~~la~~~~~~~~~---~v~~~~ggsea~~~al~~~~~~~ 128 (439)
T 3dxv_A 60 GHPAIVAAVSAAAAN-PA-GATILSA--SNAPAVT----LAERLLASFPGEGTH---KIWFGHSGSDANEAAYRAIVKAT 128 (439)
T ss_dssp SCHHHHHHHHHHHHS-CS-CSCSSSS--EEHHHHH----HHHHHHHTTTCTTTE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cc-Ccccccc--CCHHHHH----HHHHHHHhCCCCCCC---EEEEeCCHHHHHHHHHHHHHHHh
Confidence 588999998877643 21 1111111 1233333 3456888885433 2 2456778999999999876 34
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccc-------e-----EEeeeecCCCCCCC-----CHHHHHHHhc---c
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-------F-----ESFPYKVNPQTGYI-----DYEKLEEKAM---D 299 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-------~-----~vv~~~vd~~~g~I-----D~d~Le~~i~---~ 299 (403)
++++|++....+.|.... .+...+.. + .+..++++. .+.. |+++|+++++ .
T Consensus 129 ~~~~vi~~~~~yhg~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l~~~~~ 199 (439)
T 3dxv_A 129 GRSGVIAFAGAYHGCTVG--------SMAFSGHSVQADAAKADGLILLPYPDPYRP-YRNDPTGDAILTLLTEKLAAVPA 199 (439)
T ss_dssp SCCEEEEETTCCCCSSHH--------HHCC-------------CEEEECCCCSSSC-BTTBTTSHHHHHHHHHHHHTSCT
T ss_pred CCCEEEEECCCCCCCcHH--------HHhhcCCCchhhccccCCCCCCcEEcCCCc-ccccccHHHHHHHHHHHHHhcCC
Confidence 667777776554332110 11111110 0 111222211 1112 7999999984 3
Q ss_pred CCCcEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccccccccccc-cc-CCCC-cccEEEEcCcCCCcC-C
Q 015647 300 YRPKILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKE-LA-SPFD-YCDIVTSTTHKSLRG-P 369 (403)
Q Consensus 300 ~~pklViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~-~p~~-~aDivt~StHKtL~G-P 369 (403)
.++++|++.+.+ .|...+ +++|.++|+++|++||+|.+|+ |+...+. .. ..++ ..|+++ +.|+|.+ .
T Consensus 200 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~di~s--~sK~~~~G~ 276 (439)
T 3dxv_A 200 GSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPDILV--LGKGLGGGL 276 (439)
T ss_dssp TCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCSEEE--ECGGGGTTS
T ss_pred CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCCEEE--EcchhcCCc
Confidence 345777776542 356667 9999999999999999999997 4322221 11 1111 267774 5598853 3
Q ss_pred ceEEEEEeCC
Q 015647 370 RGGIIFFRRG 379 (403)
Q Consensus 370 ~GG~I~~~~~ 379 (403)
+.|+++.+++
T Consensus 277 riG~~~~~~~ 286 (439)
T 3dxv_A 277 PLSAVIAPAE 286 (439)
T ss_dssp CCEEEEEEHH
T ss_pred ceEEEEECHH
Confidence 4588888764
No 204
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.19 E-value=3.6e-10 Score=112.22 Aligned_cols=201 Identities=14% Similarity=0.127 Sum_probs=114.5
Q ss_pred cccceeccCc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHH--cC-CCCCCCcceEEeC-C
Q 015647 152 KGIELIASEN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKA--FD-LDSDNWGVNVQPY-S 225 (403)
Q Consensus 152 ~~l~LiaSen--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~l--fg-~~~~~~~v~V~~~-S 225 (403)
..|.|..+++ ..+|.|++++...+..... . .+...|.......+ .|+.++++ +| ++++ +|+++ +
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~-~-~~~~~y~~~~g~~~----lr~~la~~l~~g~~~~~----~v~~~~G 103 (400)
T 3asa_A 34 TVINLSIGDTTQPLNASVAEAFASSIARLSS-P-TTCRGYGPDFGLPA----LRQKLSEDFYRGFVDAK----EIFISDG 103 (400)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHHHTS-S-SCCCCCCCTTCCHH----HHHHHHHTTSTTSSCGG----GEEEESC
T ss_pred ceEeccCCCCCCCCCHHHHHHHHHHHhcccc-c-ccccCCCCCCCCHH----HHHHHHHHHHcCCCCHH----HEEEccC
Confidence 4566655544 3588999998877654210 0 01111110111122 35567787 47 5543 35444 5
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCC-CCCHHHHHHHhccCCCcE
Q 015647 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTG-YIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g-~ID~d~Le~~i~~~~pkl 304 (403)
+++|+.+++ .++++||+|++....|.+.. ..+...|.. .+++++++++++ ..|+++ + .++++
T Consensus 104 ~~~al~~~~-~~~~~gd~Vl~~~p~y~~~~---------~~~~~~g~~-~~~~~~~~~~~~~~~~l~~----~--~~~~~ 166 (400)
T 3asa_A 104 AKVDLFRLL-SFFGPNQTVAIQDPSYPAYL---------DIARLTGAK-EIIALPCLQENAFFPEFPE----D--THIDI 166 (400)
T ss_dssp HHHHHHHHH-HHHCSSCEEEEEESCCHHHH---------HHHHHTTCS-EEEEEECCGGGTTCCCCCT----T--CCCSE
T ss_pred hHHHHHHHH-HHcCCCCEEEECCCCcHHHH---------HHHHHcCCc-ceEecccchhcCcccChhh----c--cCccE
Confidence 677887754 56689999999887765432 112333432 145555543222 233321 1 36788
Q ss_pred EEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCC---CC---cccEEEEcCcCCC--cCCce
Q 015647 305 LICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASP---FD---YCDIVTSTTHKSL--RGPRG 371 (403)
Q Consensus 305 Viv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p---~~---~aDivt~StHKtL--~GP~G 371 (403)
|++...++ |.+++ +++|.++|+++|+++++|++|..... .+..+.+ ++ ..++++.|++|++ .|.+.
T Consensus 167 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~Glri 245 (400)
T 3asa_A 167 LCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFIS-DPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRL 245 (400)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCC-CTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhc-CCCCCCchhhCCCCCCceEEEecchhhcCCcchhe
Confidence 87764443 55665 66788899999999999999983211 1111111 12 1348899999987 34445
Q ss_pred EEEEEeCCC
Q 015647 372 GIIFFRRGK 380 (403)
Q Consensus 372 G~I~~~~~~ 380 (403)
|+++++++.
T Consensus 246 G~~~~~~~~ 254 (400)
T 3asa_A 246 GWTVIPQEL 254 (400)
T ss_dssp EEEECCTTC
T ss_pred eEEeeChhh
Confidence 888887653
No 205
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.19 E-value=2.4e-10 Score=115.01 Aligned_cols=185 Identities=17% Similarity=0.123 Sum_probs=114.0
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc---
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL--- 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~--- 239 (403)
.+|.|.+++...+.. +. +.+..| ..+...++ ++++++++|.+. .++++||++||.+++.++..
T Consensus 74 ~~p~v~~ai~~~~~~-~~--~~~~~~--~~~~~~~l----~~~la~~~g~~~-----v~~~~ggteA~~~al~~~~~~~~ 139 (420)
T 2pb2_A 74 CHPALVEALKSQGET-LW--HTSNVF--TNEPALRL----GRKLIDATFAER-----VLFMNSGTEANETAFKLARHYAC 139 (420)
T ss_dssp TCHHHHHHHHHHHTT-CC--CCCTTS--CCHHHHHH----HHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cc--cccCcc--CCHHHHHH----HHHHHhhCCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 378899998877643 21 222222 23333333 456888998643 35567899999999998865
Q ss_pred ----CCC-eEEecCCCCCccccccccCCccchhhhcccc-----e-----EEeeeecCCCCCCCCHHHHHHHhccCCCcE
Q 015647 240 ----PGD-RIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----F-----ESFPYKVNPQTGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 240 ----pGD-~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~-----~vv~~~vd~~~g~ID~d~Le~~i~~~~pkl 304 (403)
+|+ +|++....+.|... ..+...+.. + .+..++ ..|+++|++++.+ ++++
T Consensus 140 ~~~~~g~~~vi~~~~~yh~~~~--------~~~~~~g~~~~~~~~~p~~~~~~~~~------~~d~~~le~~i~~-~~~~ 204 (420)
T 2pb2_A 140 VRHSPFKTKIIAFHNAFHGRSL--------FTVSVGGQPKYSDGFGPKPADIIHVP------FNDLHAVKAVMDD-HTCA 204 (420)
T ss_dssp HHTCTTCCEEEEETTCCCCSSH--------HHHHHSSCHHHHTTSSSCCSCEEEEC------TTCHHHHHHHCCT-TEEE
T ss_pred hccCCCCCEEEEEeCCcCCcCH--------HHHHhcCCccccccCCCCCCCeEEec------CCCHHHHHHHhcc-CceE
Confidence 774 89888766533321 011222211 0 122222 2489999999874 6788
Q ss_pred EEEeCCC--CCc----cccHHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-cccEEEEcCcCCCcCC-ceEEE
Q 015647 305 LICGGSS--YPR----EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCDIVTSTTHKSLRGP-RGGII 374 (403)
Q Consensus 305 Viv~~s~--~g~----~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aDivt~StHKtL~GP-~GG~I 374 (403)
|++.+.+ .|. ..++++|+++|+++|++|++|++| .|+...+... ..++ ..|+++ ++|+|.+. +.|++
T Consensus 205 vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~-~g~~~~g~~~~~~~~~~~~diit--~sK~l~~G~~iG~~ 281 (420)
T 2pb2_A 205 VVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQ-CGMGRTGDLFAYMHYGVTPDILT--SAKALGGGFPVSAM 281 (420)
T ss_dssp EEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTSCCEEE
T ss_pred EEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCC-cCcccCCcHHHHHhcCCCCCeEE--ecccccCCCceEEE
Confidence 8876432 232 357999999999999999999999 4653322110 0111 268885 46998642 34777
Q ss_pred EEeCC
Q 015647 375 FFRRG 379 (403)
Q Consensus 375 ~~~~~ 379 (403)
+++++
T Consensus 282 ~~~~~ 286 (420)
T 2pb2_A 282 LTTQE 286 (420)
T ss_dssp EECHH
T ss_pred EEhHH
Confidence 77654
No 206
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.16 E-value=4.6e-10 Score=112.53 Aligned_cols=195 Identities=13% Similarity=0.036 Sum_probs=107.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-----
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL----- 238 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all----- 238 (403)
+|.|++++...+.. ...+++ .++ -.+...++ +++++++++.+.+ -.++++||++||.+++.+++
T Consensus 47 ~p~v~~a~~~~~~~-~~~~~~-~~~--~~~~~~~l----~~~la~~~~~~~~---~v~~~~gg~ea~~~al~~~~~~~~~ 115 (430)
T 3i4j_A 47 RAEVGERMAAQAAR-LPFVHG-SQF--SSDVLEEY----AGRLARFVGLPTF---RFWAVSGGSEATESAVKLARQYHVE 115 (430)
T ss_dssp CHHHHHHHHHHHHH-CCCCCT-TTC--EEHHHHHH----HHHHHHHTTCTTC---EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cccccc-ccc--CCHHHHHH----HHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHHHHh
Confidence 88888888776644 211111 111 12233333 4468888987654 13456679999999998876
Q ss_pred ---cCCCeEEecCCCCCccccccccCCccchhhhcccc-----e-------EEeeeecCC--CCCCCCHHHHHHHhcc--
Q 015647 239 ---LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----F-------ESFPYKVNP--QTGYIDYEKLEEKAMD-- 299 (403)
Q Consensus 239 ---~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~-------~vv~~~vd~--~~g~ID~d~Le~~i~~-- 299 (403)
..+|+|++....+.|... .. ....+.. + .+..++.+. ..+.+|+++|++++++
T Consensus 116 ~g~~~~~~vi~~~~~yhg~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 187 (430)
T 3i4j_A 116 RGEPGRFKVITRVPSYHGASL-GS-------LAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREG 187 (430)
T ss_dssp TTCTTCCEEEEETTC---------------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHC
T ss_pred cCCCCCcEEEEEeCCcCCCCc-cc-------ccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcC
Confidence 347899988876644321 00 1111100 0 111111110 0023467999998874
Q ss_pred -CCCcEEEEeCCC---CCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCC-C-cccEEEEcCcCCCcC
Q 015647 300 -YRPKILICGGSS---YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPF-D-YCDIVTSTTHKSLRG 368 (403)
Q Consensus 300 -~~pklViv~~s~---~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~-~-~aDivt~StHKtL~G 368 (403)
.++++|++.+.+ .|...+ +++|+++|+++|++||+|.+|. +|..........+ + ..|++++| |+|.+
T Consensus 188 ~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~s--K~l~~ 265 (430)
T 3i4j_A 188 PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLG--KGLAA 265 (430)
T ss_dssp GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEEC--GGGTT
T ss_pred CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEc--ccccC
Confidence 345667776533 233444 8999999999999999999987 4322111001111 2 25777755 99864
Q ss_pred --CceEEEEEeCC
Q 015647 369 --PRGGIIFFRRG 379 (403)
Q Consensus 369 --P~GG~I~~~~~ 379 (403)
-+-|+++++++
T Consensus 266 G~~r~G~~~~~~~ 278 (430)
T 3i4j_A 266 GYAPLAGLLAAPQ 278 (430)
T ss_dssp TSSCCEEEEECHH
T ss_pred CccccEEEEECHH
Confidence 23378887654
No 207
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.15 E-value=3.7e-10 Score=115.50 Aligned_cols=202 Identities=13% Similarity=-0.012 Sum_probs=112.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc----
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL---- 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~---- 239 (403)
+|.|.+|+...+... ..... .++ ..+...+ .+++++++++...+ ..++++||++||.+++..+..
T Consensus 93 ~p~v~~A~~~~~~~~-~~~~~-~~~--~~~~~~~----L~e~la~~~~~~~~---~v~~~~sGseA~~~Alk~a~~~~~~ 161 (457)
T 3tfu_A 93 HPALDQALTTQLRVM-NHVMF-GGL--THEPAAR----LAKLLVDITPAGLD---TVFFSDSGSVSVEVAAKMALQYWRG 161 (457)
T ss_dssp CHHHHHHHHHHHHHC-SCCCS-SSE--ECHHHHH----HHHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc-cCccc-ccc--CCHHHHH----HHHHHHHhCCCCcC---EEEEeCcHHHHHHHHHHHHHHHHHh
Confidence 778888877666432 11110 111 1222222 35568899975543 235566899999999988765
Q ss_pred ---CCC-eEEecCCCCCcccccc-ccCC-c--cch-hhhcccceEEeeeecCCCCCCCCHHHHHHHhcc--CCCcEEEEe
Q 015647 240 ---PGD-RIMGLDSPSGGHLSHG-YHTP-G--GKK-VSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD--YRPKILICG 308 (403)
Q Consensus 240 ---pGD-~VL~~~~ehgghlsh~-~~~~-~--~~~-v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~--~~pklViv~ 308 (403)
+|+ +|++....+.|..... .+.. . .+. .......+..++++.+. ....|+++|++++++ .++++|+++
T Consensus 162 ~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~d~~~le~~l~~~~~~~aavi~e 240 (457)
T 3tfu_A 162 RGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRD-YDPAYSAAFEAQLAQHAGELAAVVVE 240 (457)
T ss_dssp TTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSS-CCHHHHHHHHHHHHHHGGGEEEEEEC
T ss_pred cCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcc-cCHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 565 7887776654332000 0000 0 000 00000112223332221 123588999999874 345777777
Q ss_pred C-C--CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcC--CceEEEEEe
Q 015647 309 G-S--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRG--PRGGIIFFR 377 (403)
Q Consensus 309 ~-s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~G--P~GG~I~~~ 377 (403)
+ . ..|...+ +++|+++|+++|++||+|.+|. +|-.........++ ..|++++ .|+|.| .+.|+++++
T Consensus 241 p~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~--sK~l~gG~~~lG~v~~~ 318 (457)
T 3tfu_A 241 PVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCV--GKALTGGYLSLAATLCT 318 (457)
T ss_dssp SSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEE--CGGGGTTSSCCEEEEEE
T ss_pred CCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEE--ChhhhCCCcceEEEEEc
Confidence 6 2 3354544 9999999999999999999976 33211100000011 2688855 599977 466788877
Q ss_pred CC
Q 015647 378 RG 379 (403)
Q Consensus 378 ~~ 379 (403)
++
T Consensus 319 ~~ 320 (457)
T 3tfu_A 319 AD 320 (457)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 208
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.15 E-value=1.2e-09 Score=110.37 Aligned_cols=200 Identities=13% Similarity=-0.005 Sum_probs=112.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-----
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL----- 238 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all----- 238 (403)
+|.|.+|+...+.. . ++....+ ..+...+ .+++++++++.+.+ .++++||++||.+++..+.
T Consensus 67 ~p~v~~A~~~~~~~-~--~~~~~~~--~~~~~~~----la~~l~~~~~~~~~----v~~~~ggseA~~~al~~~~~~~~~ 133 (452)
T 3n5m_A 67 RKELAEAAYKQLQT-L--SYFPMSQ--SHEPAIK----LAEKLNEWLGGEYV----IFFSNSGSEANETAFKIARQYYAQ 133 (452)
T ss_dssp CHHHHHHHHHHHTT-C--CCCCTTS--EEHHHHH----HHHHHHHHHTSCEE----EEEESSHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHh-c--CCccccc--CCHHHHH----HHHHHHHhCCCCce----EEEeCchHHHHHHHHHHHHHHHHh
Confidence 78899998877643 2 1111111 2233333 34568888886642 3456689999999999876
Q ss_pred c---CCCeEEecCCCCCccccccccCCccchhhh---c--ccceEEeeeecCCCCCCCC---------HHHHHHHhc---
Q 015647 239 L---PGDRIMGLDSPSGGHLSHGYHTPGGKKVSA---A--SIFFESFPYKVNPQTGYID---------YEKLEEKAM--- 298 (403)
Q Consensus 239 ~---pGD~VL~~~~ehgghlsh~~~~~~~~~v~~---~--g~~~~vv~~~vd~~~g~ID---------~d~Le~~i~--- 298 (403)
. ++|+|++....+.|... +.....+..... . ...+..++.+.......-| +++|+++++
T Consensus 134 ~g~~~~~~vi~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 212 (452)
T 3n5m_A 134 KGEPHRYKFMSRYRGYHGNTM-ATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWEL 212 (452)
T ss_dssp TTCTTCCEEEEETTCCCCSSH-HHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHC
T ss_pred cCCCCCCEEEEECCCcCCCCH-HHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcC
Confidence 5 78999998877644320 000000000000 0 0011112111000001122 899999987
Q ss_pred cCCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcC--
Q 015647 299 DYRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRG-- 368 (403)
Q Consensus 299 ~~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~G-- 368 (403)
..++++|++++. +.|...+ +++|+++|+++|++||+|.+|. +|..........++ ..|++++| |++.+
T Consensus 213 ~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~s--K~l~~G~ 290 (452)
T 3n5m_A 213 SETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMA--KGITSAY 290 (452)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTS
T ss_pred CCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeec--ccccCCC
Confidence 234577777753 4455565 9999999999999999999987 43221110011111 26787755 88753
Q ss_pred CceEEEEEeCC
Q 015647 369 PRGGIIFFRRG 379 (403)
Q Consensus 369 P~GG~I~~~~~ 379 (403)
.+-|+++++++
T Consensus 291 ~~ig~~~~~~~ 301 (452)
T 3n5m_A 291 LPLSATAVKRE 301 (452)
T ss_dssp SCCEEEEEEHH
T ss_pred cceEEEEECHH
Confidence 23388887764
No 209
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.15 E-value=4.6e-10 Score=112.77 Aligned_cols=190 Identities=18% Similarity=0.094 Sum_probs=111.9
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc-CCCCCCCcceEEeCChHHHHHHHHhhh--cc
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF-DLDSDNWGVNVQPYSCTSANFAVYTGL--LL 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf-g~~~~~~~v~V~~~SGT~An~aal~al--l~ 239 (403)
.+|.|.+++...+.... .+ .+ ..+...+ .++++++++ +.+. .++++||++||.+++.+. +.
T Consensus 73 ~~~~v~~a~~~~~~~~~--~~---~~--~~~~~~~----l~~~la~~~~~~~~-----v~~~~sgseA~~~al~~ar~~~ 136 (434)
T 2epj_A 73 KHPRVLEAVEEALARGW--LY---GA--PGEAEVL----LAEKILGYVKRGGM-----IRFVNSGTEATMTAIRLARGYT 136 (434)
T ss_dssp TCHHHHHHHHHHHHTCS--CC---SS--CCHHHHH----HHHHHHHHHCTTCE-----EEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC--CC---CC--CCHHHHH----HHHHHHHhCCCCCE-----EEEeCCHHHHHHHHHHHHHHhh
Confidence 57999999987775421 11 11 1222333 345678888 4332 355678999999999872 34
Q ss_pred CCCeEEecCCCCCccccccccCCccchh------hhcccc----eEEeeeecCCCCCCCCHHHHHHHhcc--CCCcEEEE
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKV------SAASIF----FESFPYKVNPQTGYIDYEKLEEKAMD--YRPKILIC 307 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v------~~~g~~----~~vv~~~vd~~~g~ID~d~Le~~i~~--~~pklViv 307 (403)
++++|++....+.|... ..+...+... ...+.. ..+..++ ..|+++|++++++ .++++|++
T Consensus 137 ~~~~vi~~~~~yhg~~~-~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ 209 (434)
T 2epj_A 137 GRDLILKFDGCYHGSHD-AVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTP------YNDVEALERVFAEYGDRIAGVIV 209 (434)
T ss_dssp CCCEEEEEETCCCCSSG-GGSEECC------CEESSTTCCHHHHTTEEEEE------TTCHHHHHHHHHHHGGGEEEEEE
T ss_pred CCCeEEEEcCCcCCCCH-HHHHhcCCCccccCCCCCCCCCCcccCceEecC------CCCHHHHHHHHHhCCCCEEEEEE
Confidence 56788887766544321 0000000000 000110 0122222 2489999999874 25677777
Q ss_pred eCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcC-CceEEEEEe
Q 015647 308 GGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRG-PRGGIIFFR 377 (403)
Q Consensus 308 ~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~G-P~GG~I~~~ 377 (403)
.+. +.|...+ +++|+++|+++|++||+|.+|+ |+ ..+.. ...++ ..|+++ ++|+|.+ .+.|+++++
T Consensus 210 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~s--~sK~l~~G~~~G~v~~~ 285 (434)
T 2epj_A 210 EPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GF-RLGLEGAQGYFNIEGDIIV--LGKIIGGGFPVGAVAGS 285 (434)
T ss_dssp CSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TT-TSSTTHHHHHHTCCCSEEE--EEGGGGTTSSCEEEEEC
T ss_pred eCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ce-eCCcchhhHHhCCCCCeee--ecchhcCCcceeeeeec
Confidence 654 2466777 9999999999999999999998 55 22210 00111 268765 4599865 356888887
Q ss_pred CC
Q 015647 378 RG 379 (403)
Q Consensus 378 ~~ 379 (403)
++
T Consensus 286 ~~ 287 (434)
T 2epj_A 286 RE 287 (434)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 210
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.14 E-value=5.3e-10 Score=111.14 Aligned_cols=142 Identities=18% Similarity=0.123 Sum_probs=89.3
Q ss_pred EeCChHHHHHHH---HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecC-CCCCCCCHHHHHHHh
Q 015647 222 QPYSCTSANFAV---YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVN-PQTGYIDYEKLEEKA 297 (403)
Q Consensus 222 ~~~SGT~An~aa---l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd-~~~g~ID~d~Le~~i 297 (403)
++.+|+.|+.++ +.+++++||+|++....|.++. ..+...| .+++.++++ .+++.+|+++|++++
T Consensus 109 ~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l 177 (409)
T 4eu1_A 109 QTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHE---------SIFAKAG--MELTPYSYYDPATKGLNLAGMLECL 177 (409)
T ss_dssp EESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHH---------HHHHHTT--CEEEEECCEETTTTEECHHHHHHHH
T ss_pred ecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHH---------HHHHHcC--CeEEEEEeecCcCCcCcHHHHHHHH
Confidence 355677787764 4566789999999988775543 1233344 345555542 235679999999999
Q ss_pred ccC--CCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEecccccccccc----cc-ccC--CCCcccEEEEcCc
Q 015647 298 MDY--RPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAA----KE-LAS--PFDYCDIVTSTTH 363 (403)
Q Consensus 298 ~~~--~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~----g~-~~~--p~~~aDivt~StH 363 (403)
++. +++++++...+ +|..++ +++|.++|+++|+++++|.+|....... .. ... ....-.+++.|++
T Consensus 178 ~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 257 (409)
T 4eu1_A 178 DKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFS 257 (409)
T ss_dssp HHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECT
T ss_pred HhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCc
Confidence 742 34555554444 455665 5668999999999999999976532211 00 000 0111237788999
Q ss_pred CCCc--CCceEEE
Q 015647 364 KSLR--GPRGGII 374 (403)
Q Consensus 364 KtL~--GP~GG~I 374 (403)
|+++ |-+-|++
T Consensus 258 K~~g~~G~riG~~ 270 (409)
T 4eu1_A 258 KNFGLYGHRCGAL 270 (409)
T ss_dssp TTSSCGGGCCEEE
T ss_pred ccccCccCCceEE
Confidence 9873 3333876
No 211
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.13 E-value=1.4e-09 Score=109.16 Aligned_cols=184 Identities=14% Similarity=0.052 Sum_probs=108.3
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc--C
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL--P 240 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~--p 240 (403)
.+|.|.+|+...+......+++ .+...+ .+++++++++ ..+ -.++++|||+|+.+++..+.. +
T Consensus 72 ~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~----l~~~la~~~~-~~~---~v~~~~sGsea~~~ai~~a~~~~~ 136 (434)
T 3l44_A 72 AHPHITKAITTAAENGVLYGTP-------TALEVK----FAKMLKEAMP-ALD---KVRFVNSGTEAVMTTIRVARAYTG 136 (434)
T ss_dssp TCHHHHHHHHHHHHHCSCCSSC-------CHHHHH----HHHHHHHHCT-TCS---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCcCCCCC-------CHHHHH----HHHHHHHhCC-CCC---EEEEeCchHHHHHHHHHHHHHhhC
Confidence 3889999988776542211111 222222 2446888886 332 235566899999999987754 7
Q ss_pred CCeEEecCCCCCccccccccCCccchhhhcccce-----------------EEeeeecCCCCCCCCHHHHHHHhccC--C
Q 015647 241 GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFF-----------------ESFPYKVNPQTGYIDYEKLEEKAMDY--R 301 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~-----------------~vv~~~vd~~~g~ID~d~Le~~i~~~--~ 301 (403)
+++|++....+.|.... .+...+... .+..++ ..|+++|++++++. +
T Consensus 137 ~~~vi~~~~~yhg~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~ 202 (434)
T 3l44_A 137 RTKIMKFAGCYHGHSDL--------VLVAAGSGPSTLGTPDSAGVPQSIAQEVITVP------FNNVETLKEALDKWGHE 202 (434)
T ss_dssp CCEEEEETTCCCCSSGG--------GGBC-------CCCBSSTTCCHHHHTTEEEEC------TTCHHHHHHHHHHHGGG
T ss_pred CCEEEEEcCccCCCcHH--------HHhhcCCcccccCCCCcCCCCCcCCCceEecC------cccHHHHHHHHHhCCCC
Confidence 88999987765443211 111111100 111111 12899999998742 3
Q ss_pred CcEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-cccEEEEcCcCCCcC-Cce
Q 015647 302 PKILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCDIVTSTTHKSLRG-PRG 371 (403)
Q Consensus 302 pklViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aDivt~StHKtL~G-P~G 371 (403)
+++|++.+.+ .|...+ +++|+++|+++|++||+|.+|. |+ ..+... ..++ ..|++++| |+|.| .+.
T Consensus 203 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~-g~-~~g~~~~~~~~~~~~di~t~s--K~~~~G~~i 278 (434)
T 3l44_A 203 VAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT-AF-RFMYGGAQDLLGVTPDLTALG--KVIGGGLPI 278 (434)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TT-TSSSSCHHHHHTCCCSEEEEE--GGGGTTSSC
T ss_pred EEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-ce-eccccHHHHHcCCCCCeeehh--hhhcCCcCe
Confidence 5667776543 345666 9999999999999999999985 32 211110 0011 25777654 88854 234
Q ss_pred EEEEEeCC
Q 015647 372 GIIFFRRG 379 (403)
Q Consensus 372 G~I~~~~~ 379 (403)
|+++++++
T Consensus 279 G~~~~~~~ 286 (434)
T 3l44_A 279 GAYGGKKE 286 (434)
T ss_dssp EEEEECHH
T ss_pred eeEEEcHH
Confidence 77777654
No 212
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.12 E-value=1.7e-09 Score=109.45 Aligned_cols=195 Identities=13% Similarity=0.054 Sum_probs=106.9
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc---
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL--- 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~--- 239 (403)
.+|.|.+|+...+.. ...++ ...+ ..+...++ .++++++++...+ -.++++||++||.+++..+..
T Consensus 61 ~~p~v~~A~~~~~~~-~~~~~-~~~~--~~~~~~~l----a~~l~~~~~~~~~---~v~~~~sGseA~~~al~~~~~~~~ 129 (448)
T 3dod_A 61 RKKELDDAIKKQLGK-IAHST-LLGM--TNVPATQL----AETLIDISPKKLT---RVFYSDSGAEAMEIALKMAFQYWK 129 (448)
T ss_dssp SCHHHHHHHHHHHTT-CSCCC-CSSS--EEHHHHHH----HHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcc-cccc--CCHHHHHH----HHHHHHhCCCCCC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 378889888876643 21111 1111 12333333 4468888865432 235566899999999988865
Q ss_pred -CC----CeEEecCCCCCccccccccCCccchhhhcccc----------eEEeeeecCCCCC-----------CCCHHHH
Q 015647 240 -PG----DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF----------FESFPYKVNPQTG-----------YIDYEKL 293 (403)
Q Consensus 240 -pG----D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~----------~~vv~~~vd~~~g-----------~ID~d~L 293 (403)
+| |+|++....+.|... + .+...+.. ..+..++.+ ... ..|+++|
T Consensus 130 ~~G~~~~~~vi~~~~~yhg~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~l 200 (448)
T 3dod_A 130 NIGKPEKQKFIAMKNGYHGDTI-G-------AVSVGSIELFHHVYGPLMFESYKAPIP-YVYRSESGDPDECRDQCLREL 200 (448)
T ss_dssp HTTCTTCCEEEEEC-------------------------------------CEEECCC-CCTTSSSCCHHHHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCCCccH-H-------HHHhcCCccccccccCCCCCceEeCCC-ccccCCccchhhhhHHHHHHH
Confidence 55 999998877644321 1 01111100 011111111 111 1258999
Q ss_pred HHHhcc--CCCcEEEEeCC---CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcC
Q 015647 294 EEKAMD--YRPKILICGGS---SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTT 362 (403)
Q Consensus 294 e~~i~~--~~pklViv~~s---~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~St 362 (403)
+++++. .++++|++++. +.|...+ +++|+++|+++|++||+|.+|. +|..+.......++ ..|++++|
T Consensus 201 e~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~s- 279 (448)
T 3dod_A 201 AQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAG- 279 (448)
T ss_dssp HHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC-
T ss_pred HHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEec-
Confidence 999872 34567777753 2344444 9999999999999999999987 33221111011111 26787765
Q ss_pred cCCCcCC--ceEEEEEeCC
Q 015647 363 HKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 363 HKtL~GP--~GG~I~~~~~ 379 (403)
|+|.|. +.|+++.+++
T Consensus 280 -K~l~~G~~~ig~v~~~~~ 297 (448)
T 3dod_A 280 -KGITGGYLPIAVTFATED 297 (448)
T ss_dssp -GGGGTTSSCCEEEEEEHH
T ss_pred -ccccCCcCceEEEEECHH
Confidence 998542 4577777764
No 213
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.10 E-value=2.2e-09 Score=107.83 Aligned_cols=188 Identities=15% Similarity=0.090 Sum_probs=109.0
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc--C
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL--P 240 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~--p 240 (403)
.+|.|++|+...+......++ ..+...++ +++++++++ ..+ ..++++|||+||.+++..+.. +
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~-------~~~~~~~l----~~~la~~~~-~~~---~v~~~~~Gsea~~~ai~~a~~~~~ 134 (429)
T 3k28_A 70 ANDRVVEALKAVAERGTSFGA-------PTEIENKL----AKLVIERVP-SIE---IVRMVNSGTEATMSALRLARGYTG 134 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCSS-------CCHHHHHH----HHHHHHHST-TCS---EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhhCcCcCC-------CCHHHHHH----HHHHHHhCC-CCC---EEEEeCChHHHHHHHHHHHHHhhC
Confidence 489999998877654221111 12222222 446788885 222 235566899999999987754 6
Q ss_pred CCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCC-------------CCCHHHHHHHhccC--CCcEE
Q 015647 241 GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTG-------------YIDYEKLEEKAMDY--RPKIL 305 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g-------------~ID~d~Le~~i~~~--~pklV 305 (403)
+++|++....+.|.... .+...+.......++.. .+ ..|+++|+++++++ ++++|
T Consensus 135 ~~~vi~~~~~yhg~~~~--------~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 204 (429)
T 3k28_A 135 RNKILKFIGCYHGHGDS--------LLIKAGSGVATLGLPDS--PGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACV 204 (429)
T ss_dssp CCEEEEEETCCCCSCGG--------GCSSCCTTC-----CCC--TTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEE
T ss_pred CCEEEEECCCcCCCcHH--------HHHhcCCcccccCCCCc--CCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEE
Confidence 78888876655333210 01111111000000000 01 12899999998742 45677
Q ss_pred EEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-cccEEEEcCcCCCcC-CceEEEE
Q 015647 306 ICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCDIVTSTTHKSLRG-PRGGIIF 375 (403)
Q Consensus 306 iv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aDivt~StHKtL~G-P~GG~I~ 375 (403)
++.+.+ .|...+ +++|.++|+++|++||+|.+|. |+ ..+... ..++ ..|++++| |+|.+ .+.|+++
T Consensus 205 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di~t~s--K~~~~G~~iG~~~ 280 (429)
T 3k28_A 205 IVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GF-RVAYNCGQGYYGVTPDLTCLG--KVIGGGLPVGAYG 280 (429)
T ss_dssp EECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TT-TSSTTHHHHHHTCCCSEEEEC--GGGGTTSCCEEEE
T ss_pred EEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchHHHHhCCCCceehhh--hhhcCCCCeEEEE
Confidence 776543 355666 9999999999999999999994 44 222110 0011 25777654 99854 4558888
Q ss_pred EeCC
Q 015647 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
++++
T Consensus 281 ~~~~ 284 (429)
T 3k28_A 281 GKAE 284 (429)
T ss_dssp ECHH
T ss_pred EcHH
Confidence 7764
No 214
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.10 E-value=1.2e-09 Score=109.27 Aligned_cols=202 Identities=13% Similarity=0.000 Sum_probs=112.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCC
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPG 241 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pG 241 (403)
+|.|++++...+... . +....|. .+...++ +++++++++.+.+ -.++++||++|+.+++..+. ..+
T Consensus 61 ~p~v~~a~~~~~~~~-~--~~~~~~~--~~~~~~l----~~~la~~~~~~~~---~v~~~~gg~ea~~~a~~~~~~~~~~ 128 (433)
T 1zod_A 61 HPEIVSVIGEYAGKL-D--HLFSEML--SRPVVDL----ATRLANITPPGLD---RALLLSTGAESNEAAIRMAKLVTGK 128 (433)
T ss_dssp CHHHHHHHHHHHHHC-C--CCCTTCC--CHHHHHH----HHHHHHHSCTTCC---EEEEESCHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhC-c--ccccccC--CHHHHHH----HHHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHhhCC
Confidence 899999988776542 1 1111121 2222223 4468889987653 23455689999999998653 345
Q ss_pred CeEEecCCCCCccccccc-cC--CccchhhhcccceEEeeeecCC---------CCCCCCHHHHHHHhcc---CCCcEEE
Q 015647 242 DRIMGLDSPSGGHLSHGY-HT--PGGKKVSAASIFFESFPYKVNP---------QTGYIDYEKLEEKAMD---YRPKILI 306 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~-~~--~~~~~v~~~g~~~~vv~~~vd~---------~~g~ID~d~Le~~i~~---~~pklVi 306 (403)
|+|++....+.|...... .. +...........+..++++... +.+.+|+++|++++++ .++++|+
T Consensus 129 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi 208 (433)
T 1zod_A 129 YEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFI 208 (433)
T ss_dssp CEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 789888766533211000 00 0000000000122233222100 0112579999999874 3567777
Q ss_pred EeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcC-CceEEEEEe
Q 015647 307 CGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRG-PRGGIIFFR 377 (403)
Q Consensus 307 v~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~G-P~GG~I~~~ 377 (403)
+++. ..|...+ +++|+++|+++|++||+|.+|+ +|..........++ ..|++++| |+|.+ -+.|+++++
T Consensus 209 ~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~s--K~~~~G~~ig~~~~~ 286 (433)
T 1zod_A 209 AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLS--KTLGAGLPLAAIVTS 286 (433)
T ss_dssp ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--HHHHTTSSCEEEEEC
T ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEec--ccccCCCCeeEEEEh
Confidence 7654 2465555 9999999999999999999998 44321100000011 25776554 99864 234888887
Q ss_pred CC
Q 015647 378 RG 379 (403)
Q Consensus 378 ~~ 379 (403)
++
T Consensus 287 ~~ 288 (433)
T 1zod_A 287 AA 288 (433)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 215
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.09 E-value=1.5e-09 Score=110.33 Aligned_cols=198 Identities=10% Similarity=-0.009 Sum_probs=109.0
Q ss_pred CcHHHH-H-HHHH---HhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCChHHHHHHHHhh
Q 015647 163 VCRAVM-E-ALGS---HLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD-LDSDNWGVNVQPYSCTSANFAVYTG 236 (403)
Q Consensus 163 ~~p~V~-e-A~~s---~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg-~~~~~~~v~V~~~SGT~An~aal~a 236 (403)
.+|.|+ + |+.. .+.. . .+.+.+| ..+...++ +++++++++ ...+ -.++++||++||.+++..
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~-~--~~~~~~~--~~~~~~~l----a~~la~~~~~~~~~---~v~~~~~gseA~~~aik~ 138 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAAL-N--KPSNSDV--YSVAMARF----VETFARVLGDPALP---HLFFVEGGALAVENALKA 138 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHT-C--CCCTTTC--CCHHHHHH----HHHHHHHHCCTTCC---EEEEESSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh-c--CCCCccc--CCHHHHHH----HHHHHHhcCCCCCC---EEEEeCchHHHHHHHHHH
Confidence 478888 8 8776 4432 1 1111122 12222223 345888886 3332 134556799999999875
Q ss_pred hc---c-----------CCCeEEecCCCCCccccccccCCccc-hhhhccc---ceEEeeeecCC--CC-------CCCC
Q 015647 237 LL---L-----------PGDRIMGLDSPSGGHLSHGYHTPGGK-KVSAASI---FFESFPYKVNP--QT-------GYID 289 (403)
Q Consensus 237 ll---~-----------pGD~VL~~~~ehgghlsh~~~~~~~~-~v~~~g~---~~~vv~~~vd~--~~-------g~ID 289 (403)
+. . +||+||+....+.|..... +...+. +....+. ...+..++.+. .. ..+|
T Consensus 139 a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 217 (449)
T 2cjg_A 139 AFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYT-LSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEA 217 (449)
T ss_dssp HHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTG-GGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHH
T ss_pred HHHHhcccccccccccCCCCEEEEECCCcCCcccch-hhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHH
Confidence 43 2 2899999987665432111 000000 0000010 01233333321 00 0246
Q ss_pred HHHHHHHhcc--CCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc-c-CCCC-cccEE
Q 015647 290 YEKLEEKAMD--YRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL-A-SPFD-YCDIV 358 (403)
Q Consensus 290 ~d~Le~~i~~--~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~-~p~~-~aDiv 358 (403)
+++|++++++ .++++|++++. ..|...+ +++|+++|+++|++||+|.+|. |+...|.. . ..++ ..|++
T Consensus 218 ~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~~di~ 296 (449)
T 2cjg_A 218 LRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQT-GCGLTGTAWAYQQLDVAPDIV 296 (449)
T ss_dssp HHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEE
T ss_pred HHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecccc-CCCccCcceeecccCCCceEE
Confidence 6779998863 35678887753 2455566 9999999999999999999998 33222211 0 0111 26888
Q ss_pred EEcCcCCCcCCceEEEEEeCC
Q 015647 359 TSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 359 t~StHKtL~GP~GG~I~~~~~ 379 (403)
++| |+| |- |+++++++
T Consensus 297 t~s--K~l--~i-G~~~~~~~ 312 (449)
T 2cjg_A 297 AFG--KKT--QV-CGVMAGRR 312 (449)
T ss_dssp EEC--GGG--SS-EEEEECGG
T ss_pred Eec--Ccc--cE-EEEEECHH
Confidence 665 998 54 55556553
No 216
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.08 E-value=3.7e-09 Score=105.76 Aligned_cols=191 Identities=17% Similarity=0.061 Sum_probs=110.1
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cC
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LP 240 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~p 240 (403)
.+|.|++++...+.... .+ .+ -.+...+ ..++++++++ ..+ ..++++||++|+.+++.... ..
T Consensus 69 ~~p~v~~a~~~~~~~~~--~~---~~--~~~~~~~----la~~l~~~~~-~~~---~v~~~~ggsea~~~al~~a~~~~~ 133 (427)
T 3fq8_A 69 AHPEVIEALKVAMEKGT--SF---GA--PCALENV----LAEMVNDAVP-SIE---MVRFVNSGTEACMAVLRIMRAYTG 133 (427)
T ss_dssp TCHHHHHHHHHHHTTCS--CC---SS--CCHHHHH----HHHHHHHHST-TCS---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCC--Cc---CC--CCHHHHH----HHHHHHHhCC-CCC---EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 48999999887764321 11 01 1222222 3446888887 332 23556689999999985432 34
Q ss_pred CCeEEecCCCCCccccccccCCccchhhhcc----cce------EEeeeecCCCCCCCCHHHHHHHhccC--CCcEEEEe
Q 015647 241 GDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS----IFF------ESFPYKVNPQTGYIDYEKLEEKAMDY--RPKILICG 308 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g----~~~------~vv~~~vd~~~g~ID~d~Le~~i~~~--~pklViv~ 308 (403)
+++|++....+.|..... ....+......+ ..+ .+..++. .|+++|+++++++ ++++|++.
T Consensus 134 ~~~vi~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~vi~~ 206 (427)
T 3fq8_A 134 RDKIIKFEGCYHGHADMF-LVKAGSGVATLGLPSSPGVPKKTTANTLTTPY------NDLEAVKALFAENPGEIAGVILE 206 (427)
T ss_dssp CCEEEEEETCCCCSCGGG-CSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET------TCHHHHHHHHHHSTTTEEEEEEC
T ss_pred CCEEEEECCCcCCCCHHH-HHhcCCcccccCCCCCCCCCCcccCceeecCC------CCHHHHHHHHHhCCCCEEEEEEc
Confidence 578888776654432110 000000000000 000 0111221 2899999999764 46777776
Q ss_pred CC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcC-CceEEEEEeC
Q 015647 309 GS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRR 378 (403)
Q Consensus 309 ~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~ 378 (403)
+. +.|...+ +++|.++|+++|++||+|.+|+ |+ ..+.. ...++ ..|++++| |+|.+ -+.|+++.++
T Consensus 207 p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di~t~s--K~~~~G~~~G~~~~~~ 282 (427)
T 3fq8_A 207 PIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFGVTPDLTTLG--KIIGGGLPVGAYGGKR 282 (427)
T ss_dssp SSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTTCCCSEEEEC--GGGGTTSSCEEEEECH
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcCCCCChhhhh--hhhhCCcceEEEEEcH
Confidence 54 2356677 9999999999999999999997 54 22211 01111 25787666 99863 3568888765
Q ss_pred C
Q 015647 379 G 379 (403)
Q Consensus 379 ~ 379 (403)
+
T Consensus 283 ~ 283 (427)
T 3fq8_A 283 E 283 (427)
T ss_dssp H
T ss_pred H
Confidence 4
No 217
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.08 E-value=3.1e-09 Score=108.08 Aligned_cols=194 Identities=12% Similarity=0.023 Sum_probs=112.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc----
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL---- 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~---- 239 (403)
+|.|++|+...+... ...+...++ ..+...+ .+++++++++.+.+ -.++++||++||.+++..+++
T Consensus 68 ~p~v~~A~~~~~~~~-~~~~~~~~~--~~~~~~~----la~~l~~~~~~~~~---~v~~~~ggseA~~~al~~~~~~~~~ 137 (459)
T 4a6r_A 68 RKDFAEAARRQMEEL-PFYNTFFKT--THPAVVE----LSSLLAEVTPAGFD---RVFYTNSGSESVDTMIRMVRRYWDV 137 (459)
T ss_dssp CHHHHHHHHHHHHHC-SCCCTTSSS--CCHHHHH----HHHHHHHHSCTTCC---EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc-ccccccccc--CCHHHHH----HHHHHHHhCCCCCC---EEEEeCchHHHHHHHHHHHHHHHHh
Confidence 788999888776542 111221111 1233333 34568888876554 234556899999999998875
Q ss_pred ----CCCeEEecCCCCCccccccccCCccchhhhcc------------cceEEeeeec--CCCCCCCC--------HHHH
Q 015647 240 ----PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS------------IFFESFPYKV--NPQTGYID--------YEKL 293 (403)
Q Consensus 240 ----pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g------------~~~~vv~~~v--d~~~g~ID--------~d~L 293 (403)
++++|++....+.|... + .....+ ..+..++++. +.... +| +++|
T Consensus 138 ~g~~~~~~vi~~~~~yhg~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~l 208 (459)
T 4a6r_A 138 QGKPEKKTLIGRWNGYHGSTI-G-------GASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWL 208 (459)
T ss_dssp TTCTTCCEEEEETTCCCCSSH-H-------HHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCcCCccH-H-------HHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHH
Confidence 57899988876644321 0 001111 1122222211 00011 45 7889
Q ss_pred HHHhcc---CCCcEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccc-cccccccccc-CCCC-cccEEEEc
Q 015647 294 EEKAMD---YRPKILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELA-SPFD-YCDIVTST 361 (403)
Q Consensus 294 e~~i~~---~~pklViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~-~p~~-~aDivt~S 361 (403)
++++.+ .++++|++.+.+ .|...+ +++|+++|+++|++||+|.+|. +|-... ... ..++ ..|++++|
T Consensus 209 e~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~-~~~~~~~~~~pdi~t~s 287 (459)
T 4a6r_A 209 EEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGE-WFGHQHFGFQPDLFTAA 287 (459)
T ss_dssp HHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSHHHHHTCCCSEEEEC
T ss_pred HHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-cchHhhcCCCCCeeehh
Confidence 988864 345677776532 244555 9999999999999999999986 332211 000 0011 26888765
Q ss_pred CcCCCcC--CceEEEEEeCC
Q 015647 362 THKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 362 tHKtL~G--P~GG~I~~~~~ 379 (403)
|+|.| .+-|+++++++
T Consensus 288 --K~l~gg~~~lg~v~~~~~ 305 (459)
T 4a6r_A 288 --KGLSSGYLPIGAVFVGKR 305 (459)
T ss_dssp --GGGGTTSSCCEEEEECHH
T ss_pred --hhhcCCCCCccceeeCHH
Confidence 99865 34477777654
No 218
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.07 E-value=1.2e-09 Score=110.57 Aligned_cols=190 Identities=16% Similarity=0.107 Sum_probs=107.9
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhh---hcc
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTG---LLL 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~a---ll~ 239 (403)
.+|.|.+++...+.... .+ .+ ..+++....+++++.++ ..+ -.++++||++|+.+++.+ +.+
T Consensus 74 ~~~~v~~a~~~~~~~~~--~~---~~------~~~~~~~la~~l~~~~~-~~~---~v~~~~gg~eA~~~al~~ar~~~~ 138 (453)
T 2cy8_A 74 GHPRVNAAIAEALSHGV--QY---AA------SHPLEVRWAERIVAAFP-SIR---KLRFTGSGTETTLLALRVARAFTG 138 (453)
T ss_dssp TCHHHHHHHHHHHTTTC--SS---CS------SCHHHHHHHHHHHHHCT-TCS---EEEEESCHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCC--CC---CC------CCHHHHHHHHHHHhhCC-CCC---EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 58999999987764311 11 11 12333344556777775 332 235567899999999987 444
Q ss_pred CCCeEEecCCCCCccccccccCCccch---hhhcccc----eEEeeeecCCCCCCCCHHHHHHHhcc--CCCcEEEEeCC
Q 015647 240 PGDRIMGLDSPSGGHLSHGYHTPGGKK---VSAASIF----FESFPYKVNPQTGYIDYEKLEEKAMD--YRPKILICGGS 310 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~---v~~~g~~----~~vv~~~vd~~~g~ID~d~Le~~i~~--~~pklViv~~s 310 (403)
+++|++....+.|..... ....+.. ....+.. ..+..++ ..|+++|++++++ .++++|++.+.
T Consensus 139 -~~~vi~~~~~yhg~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ep~ 210 (453)
T 2cy8_A 139 -RRMILRFEGHYHGWHDFS-ASGYNSHFDGQPAPGVLPETTANTLLIR------PDDIEGMREVFANHGSDIAAFIAEPV 210 (453)
T ss_dssp -CCEEEEECC-----------------------------CGGGEEEEC------TTCHHHHHHHHHHHGGGEEEEEECSS
T ss_pred -CCEEEEEcCCcCCCchhh-HhhcCCccCCCcCCCCCccccCceeecC------CCCHHHHHHHHHhcCCCEEEEEECCC
Confidence 467777776554332100 0000000 0000110 0112221 2589999999874 24677777654
Q ss_pred C--CCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015647 311 S--YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 311 ~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
. .|...+ +++|.++|+++|++||+|.+|+ |+ ..+.. ...++ ..|+++ +.|+|.+ .+.|+++++++
T Consensus 211 ~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~s--~sK~l~~G~~~G~v~~~~~ 285 (453)
T 2cy8_A 211 GSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGNHGMQALLDVQPDLTC--LAKASAGGLPGGILGGRED 285 (453)
T ss_dssp EHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCTTHHHHHHTCCCSEEE--EEGGGGTTSSCEEEEECHH
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCchhhhHHhCCCCcEEE--EChhhhCCcceEEEechHH
Confidence 2 355667 9999999999999999999997 65 22210 00111 268774 5599874 46788888764
No 219
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.06 E-value=4e-09 Score=107.26 Aligned_cols=202 Identities=11% Similarity=-0.007 Sum_probs=111.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc----
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL---- 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~---- 239 (403)
+|.|++|+...+.... ..+....+ -.+...++ .++++++++...+ -.++++||++||.+++.++..
T Consensus 69 ~p~v~~A~~~~~~~~~-~~~~~~~~--~~~~~~~l----a~~l~~~~~~~~~---~v~~~~gGseA~~~al~~~~~~~~~ 138 (460)
T 3gju_A 69 RQKIADAIATQAKNLA-YYHAYVGH--GTEASITL----AKMIIDRAPKGMS---RVYFGLSGSDANETNIKLIWYYNNV 138 (460)
T ss_dssp CHHHHHHHHHHHHHHS-CCCCCTTC--CCHHHHHH----HHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcc-cccccccc--CCHHHHHH----HHHHHhhCCCCcC---EEEEeCchHHHHHHHHHHHHHHHHh
Confidence 6888888876664421 11111111 12223333 4467888865543 134566899999999988864
Q ss_pred ----CCCeEEecCCCCCccccccccCCccch-----hhhcccceEEeeeec--CCCCCCCC--------HHHHHHHhcc-
Q 015647 240 ----PGDRIMGLDSPSGGHLSHGYHTPGGKK-----VSAASIFFESFPYKV--NPQTGYID--------YEKLEEKAMD- 299 (403)
Q Consensus 240 ----pGD~VL~~~~ehgghlsh~~~~~~~~~-----v~~~g~~~~vv~~~v--d~~~g~ID--------~d~Le~~i~~- 299 (403)
++++|++....+.|..... ....+.. .......+..++++. ......++ +++|++++.+
T Consensus 139 ~g~~~~~~vi~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~ 217 (460)
T 3gju_A 139 LGRPEKKKIISRWRGYHGSGVMT-GSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAE 217 (460)
T ss_dssp TTCTTCCEEEEETTCCCCSSHHH-HHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCcCCCCHHH-hhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhc
Confidence 4688998877664432100 0000000 000011122333221 10011123 6889988864
Q ss_pred --CCCcEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccc-cccccccccc-CCCC-cccEEEEcCcCCCcC
Q 015647 300 --YRPKILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELA-SPFD-YCDIVTSTTHKSLRG 368 (403)
Q Consensus 300 --~~pklViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~-~p~~-~aDivt~StHKtL~G 368 (403)
.++++|++++.+ .|...+ +++|+++|+++|++||+|.+|. +|-... ... ..++ ..|++++| |+|.|
T Consensus 218 ~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~-~~~~~~~~~~pdi~t~s--K~l~g 294 (460)
T 3gju_A 218 GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGT-MFGSDHYGIKPDLITIA--KGLTS 294 (460)
T ss_dssp CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SCHHHHHTCCCSEEEEC--GGGTT
T ss_pred CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-cchHhhcCCCCCeeeee--hhhcC
Confidence 345677777533 233444 9999999999999999999987 432210 100 0011 26788765 99976
Q ss_pred --CceEEEEEeCC
Q 015647 369 --PRGGIIFFRRG 379 (403)
Q Consensus 369 --P~GG~I~~~~~ 379 (403)
.+-|+++++++
T Consensus 295 G~~~lg~v~~~~~ 307 (460)
T 3gju_A 295 AYAPLSGVIVADR 307 (460)
T ss_dssp TSSCCEEEEEEHH
T ss_pred CCCCeEEEEECHH
Confidence 45577777664
No 220
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.06 E-value=5.4e-09 Score=104.81 Aligned_cols=201 Identities=16% Similarity=0.130 Sum_probs=111.7
Q ss_pred ccceeccCc-----cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015647 153 GIELIASEN-----FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSen-----~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
.|.+.++.. +.+|.|++++...+......++ -.+...++ +++++++++ ..+ -.++++|||
T Consensus 55 ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-------~~~~~~~l----a~~l~~~~~-~~~---~v~~~~sGs 119 (429)
T 4e77_A 55 YIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGA-------PTEMEVKM----AQLVTDLVP-TMD---MVRMVNSGT 119 (429)
T ss_dssp EEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSS-------CCHHHHHH----HHHHHHHST-TCS---EEEEESSHH
T ss_pred EEECCCchhccccCCCCHHHHHHHHHHHHhCcccCC-------CCHHHHHH----HHHHHhhCC-CCC---EEEEeCcHH
Confidence 455554432 1489999998877654221111 12222222 446788886 232 235566899
Q ss_pred HHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCcc-chhh-----hccc----ceEEeeeecCCCCCCCCHHHHHH
Q 015647 228 SANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGG-KKVS-----AASI----FFESFPYKVNPQTGYIDYEKLEE 295 (403)
Q Consensus 228 ~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~-~~v~-----~~g~----~~~vv~~~vd~~~g~ID~d~Le~ 295 (403)
+|+.+++..+. ..+++|++....+.|.... .....+ .... ..+. ...+..++ ..|+++|++
T Consensus 120 ea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~ 192 (429)
T 4e77_A 120 EATMSAIRLARGYTGRDKIIKFEGCYHGHADC-LLVKAGSGALTLGQPNSPGVPTDFAKHTLTCT------YNDLASVRQ 192 (429)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEETTCCCC-------------------CCCTTSCGGGGTTEEEEC------TTCHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCccCCCChh-hhhhcCCcccccCCCCcCCCCCccCCceeecC------CCCHHHHHH
Confidence 99999988543 3567888876655333210 000000 0000 0000 00111111 238999999
Q ss_pred HhccC--CCcEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcC
Q 015647 296 KAMDY--RPKILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHK 364 (403)
Q Consensus 296 ~i~~~--~pklViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHK 364 (403)
++++. ++++|++.+.+ .|...+ +++|.++|+++|++||+|.+|+ |+ ..+.. ...++ ..|++++| |
T Consensus 193 ~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~-r~g~~~~~~~~~~~pdi~t~s--K 268 (429)
T 4e77_A 193 AFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF-RVALAGAQDYYHVIPDLTCLG--K 268 (429)
T ss_dssp HHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT-TTBTTCHHHHTTCCCSEEEEE--G
T ss_pred HHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc-ccCcchHHHhcCCCCCeeeec--c
Confidence 99753 34667776542 345566 9999999999999999999998 43 21210 01111 25777554 9
Q ss_pred CCcC-CceEEEEEeCC
Q 015647 365 SLRG-PRGGIIFFRRG 379 (403)
Q Consensus 365 tL~G-P~GG~I~~~~~ 379 (403)
+|.| .+.|+++.+++
T Consensus 269 ~~~~G~~~G~~~~~~~ 284 (429)
T 4e77_A 269 IIGGGMPVGAFGGRRE 284 (429)
T ss_dssp GGGTTSCCEEEEECHH
T ss_pred cccCCCCeEEEEECHH
Confidence 8863 35688887654
No 221
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.00 E-value=7.5e-09 Score=106.33 Aligned_cols=195 Identities=12% Similarity=-0.005 Sum_probs=111.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc----
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL---- 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~---- 239 (403)
+|.|.+|+...+.. ....+...++ ..+...++ .++++++++...+ -.++++||++||.++++.+..
T Consensus 73 ~p~v~~A~~~~~~~-~~~~~~~~~~--~~~~~~~l----ae~l~~~~~~~~~---~v~~~~sGseA~~~aik~a~~~~~~ 142 (472)
T 3hmu_A 73 RDELAEVAARQMRE-LPYYNTFFKT--THVPAIAL----AQKLAELAPGDLN---HVFFAGGGSEANDTNIRMVRTYWQN 142 (472)
T ss_dssp CHHHHHHHHHHHHH-CSCCCSSSSE--ECHHHHHH----HHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cccccccccc--CCHHHHHH----HHHHHHhCCCCCC---EEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 78899888877654 2111211122 12333333 4468888875443 134566899999999988764
Q ss_pred ----CCCeEEecCCCCCccccccccCCccchhhhccc-----------ceEEeeeec--CCCCCCCC--------HHHHH
Q 015647 240 ----PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI-----------FFESFPYKV--NPQTGYID--------YEKLE 294 (403)
Q Consensus 240 ----pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~-----------~~~vv~~~v--d~~~g~ID--------~d~Le 294 (403)
++++|++....+.|... + .....+. .+..++++. +.... .| +++|+
T Consensus 143 ~g~~~~~~ii~~~~~yHg~t~-~-------~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le 213 (472)
T 3hmu_A 143 KGQPEKTVIISRKNAYHGSTV-A-------SSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELE 213 (472)
T ss_dssp TTCTTCCEEEEETTCCCCSSH-H-------HHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCcCCCccH-H-------hhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHH
Confidence 46788888766533210 0 1111111 122232211 00011 34 78888
Q ss_pred HHhcc---CCCcEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCc
Q 015647 295 EKAMD---YRPKILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTH 363 (403)
Q Consensus 295 ~~i~~---~~pklViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StH 363 (403)
+++.+ .++++|++++.. .|.+.+ +++|+++|+++|++||+|.+|. +|-.........++ ..|+++++
T Consensus 214 ~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~s-- 291 (472)
T 3hmu_A 214 EAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIA-- 291 (472)
T ss_dssp HHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEEC--
T ss_pred HHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeec--
Confidence 88863 235677776532 344555 9999999999999999999987 43221100000011 26888765
Q ss_pred CCCcC--CceEEEEEeCC
Q 015647 364 KSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 364 KtL~G--P~GG~I~~~~~ 379 (403)
|+|.| .+-|+++++++
T Consensus 292 K~l~gg~~plG~v~~~~~ 309 (472)
T 3hmu_A 292 KGLSSGYAPIGGSIVCDE 309 (472)
T ss_dssp GGGTTTSSCCEEEEEEHH
T ss_pred hhhhcCCcceEEEEECHH
Confidence 99876 34577777654
No 222
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.00 E-value=6.8e-09 Score=105.69 Aligned_cols=204 Identities=15% Similarity=-0.026 Sum_probs=105.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCC
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPG 241 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pG 241 (403)
+|.|.+|+...+.... .+....+ -.+...+ .+++++++++....+ -.++++|||+||.+++..+. ..+
T Consensus 82 ~p~v~~A~~~~~~~~~--~~~~~~~--~~~~~~~----la~~l~~~~~~~~~~--~v~~~~sGseA~~~alk~a~~~~g~ 151 (453)
T 4ffc_A 82 HPAVAAAIADQATHFT--HTCFMVT--PYEQYVQ----VAELLNALTPGDHDK--RTALFNSGAEAVENAIKVARLATGR 151 (453)
T ss_dssp CHHHHHHHHHHHHHCS--CCTTTTS--CCHHHHH----HHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhcc--ccccCcC--CCHHHHH----HHHHHHHhCCCCCCc--EEEEeCcHHHHHHHHHHHHHHhcCC
Confidence 7788888776664321 1111111 1222222 345688888754211 23556689999999997664 245
Q ss_pred CeEEecCCCCCcccccc-ccC----CccchhhhcccceEEeeeecC--CCCCC-------CCHHHHHHHhccCCCcEEEE
Q 015647 242 DRIMGLDSPSGGHLSHG-YHT----PGGKKVSAASIFFESFPYKVN--PQTGY-------IDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~-~~~----~~~~~v~~~g~~~~vv~~~vd--~~~g~-------ID~d~Le~~i~~~~pklViv 307 (403)
++|++....+.|..... .+. +...........+..++++.. ...+. .+.+.|++.+...++++|++
T Consensus 152 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ 231 (453)
T 4ffc_A 152 PAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIII 231 (453)
T ss_dssp CEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEE
T ss_pred CEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 78988877664442100 000 000000000012233333321 00111 11355666654434566777
Q ss_pred eCCC--CCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcC-CceEEEEEeC
Q 015647 308 GGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRR 378 (403)
Q Consensus 308 ~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~ 378 (403)
.+.+ .|...+ +++|+++|+++|++||+|.+|. +|..........++ ..|++++| |+|.+ .+-|++++++
T Consensus 232 ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~ 309 (453)
T 4ffc_A 232 EPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMA--KGIAGGMPLSAVTGRA 309 (453)
T ss_dssp CSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--GGGGTTSSCEEEEEEH
T ss_pred cCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhh--hhhcCCcCeEEEEECH
Confidence 6532 234444 9999999999999999999985 33221100000011 25787765 98853 3447777766
Q ss_pred C
Q 015647 379 G 379 (403)
Q Consensus 379 ~ 379 (403)
+
T Consensus 310 ~ 310 (453)
T 4ffc_A 310 E 310 (453)
T ss_dssp H
T ss_pred H
Confidence 4
No 223
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=98.99 E-value=3.7e-09 Score=105.85 Aligned_cols=201 Identities=16% Similarity=0.065 Sum_probs=114.6
Q ss_pred ccceeccC--cc---CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015647 153 GIELIASE--NF---VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSe--n~---~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
.|.+..+. ++ .+|.|++++...+.... .+ .+ -.+...+ .+++++++++ ..+ -.++++||+
T Consensus 54 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~---~~--~~~~~~~----l~~~l~~~~~-~~~---~v~~~~~g~ 118 (424)
T 2e7u_A 54 YLDYVMSWGPLILGHAHPKVLARVRETLERGL--TF---GA--PSPLEVA----LAKKVKRAYP-FVD---LVRFVNSGT 118 (424)
T ss_dssp EEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CC---SS--CCHHHHH----HHHHHHHHCT-TCC---EEEEESSHH
T ss_pred EEEccccccccccCCCCHHHHHHHHHHHHhCC--CC---CC--CCHHHHH----HHHHHHHhCC-CCC---EEEEeCCHH
Confidence 35665443 23 48999999988775421 11 11 1222233 3456888885 332 135566899
Q ss_pred HHHHHHHhh--hccCCCeEEecCCCCCccccccc-cCCccc-hh---hhcccc----eEEeeeecCCCCCCCCHHHHHHH
Q 015647 228 SANFAVYTG--LLLPGDRIMGLDSPSGGHLSHGY-HTPGGK-KV---SAASIF----FESFPYKVNPQTGYIDYEKLEEK 296 (403)
Q Consensus 228 ~An~aal~a--ll~pGD~VL~~~~ehgghlsh~~-~~~~~~-~v---~~~g~~----~~vv~~~vd~~~g~ID~d~Le~~ 296 (403)
+|+.+++.. .+..+|+|++....+.|...... ....++ .. ...|.. ..+..++ ..|+++|+++
T Consensus 119 ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~------~~d~~~le~~ 192 (424)
T 2e7u_A 119 EATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLE------YNDPEGLREV 192 (424)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEEC------TTCHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCC------CCCHHHHHHH
Confidence 999999885 23445788887766544321000 000000 00 000100 0122222 2589999998
Q ss_pred hcc--CCCcEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCC
Q 015647 297 AMD--YRPKILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKS 365 (403)
Q Consensus 297 i~~--~~pklViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKt 365 (403)
+++ .++++|++.+.+ .|...+ +++|.++ +++|++||+|.+|+ |+ ..+.. ...++ ..|++ |++|+
T Consensus 193 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK~ 267 (424)
T 2e7u_A 193 LKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GF-RLAFGGATELLGLKPDLV--TLGKI 267 (424)
T ss_dssp HHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TT-TSSTTHHHHHHTCCCSEE--EECGG
T ss_pred HHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-cc-ccchhHHHHHhCCCcchh--hhhhh
Confidence 874 245777776542 466677 9999999 99999999999998 65 22210 00111 26776 55699
Q ss_pred CcC-CceEEEEEeCC
Q 015647 366 LRG-PRGGIIFFRRG 379 (403)
Q Consensus 366 L~G-P~GG~I~~~~~ 379 (403)
|.+ -+.|+++++++
T Consensus 268 l~~G~~~G~~~~~~~ 282 (424)
T 2e7u_A 268 LGGGLPAAAYAGRRE 282 (424)
T ss_dssp GGTTSSCEEEEECHH
T ss_pred hhCCcceEEEEEcHH
Confidence 864 25688887764
No 224
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.98 E-value=3.5e-09 Score=107.69 Aligned_cols=203 Identities=11% Similarity=-0.028 Sum_probs=104.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc--CC
Q 015647 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL--PG 241 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~--pG 241 (403)
+|.|.+|+...+.... .+....+ ..+...+ ..++++++++....+ -.++++|||+||.+++..+.. .+
T Consensus 79 ~p~v~~A~~~~~~~~~--~~~~~~~--~~~~~~~----la~~l~~~~~~~~~~--~v~~~~sGseA~~~Alk~a~~~~g~ 148 (451)
T 3oks_A 79 APKVVEAVRSQVGDFT--HTCFMVT--PYEGYVA----VCEQLNRLTPVRGDK--RSALFNSGSEAVENAVKIARSHTHK 148 (451)
T ss_dssp CHHHHHHHHHHHTTCS--CCTTTTS--CCHHHHH----HHHHHHHHSSCCSSE--EEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhcc--cccCCcc--CCHHHHH----HHHHHHHhCCcCCCC--EEEEeCcHHHHHHHHHHHHHHhcCC
Confidence 7788888776654321 1110111 1222222 345688888743211 235567899999999977653 45
Q ss_pred CeEEecCCCCCcccccc-ccC----CccchhhhcccceEEeeee---------cCCCC-CCCCHHHHHHHhcc----CCC
Q 015647 242 DRIMGLDSPSGGHLSHG-YHT----PGGKKVSAASIFFESFPYK---------VNPQT-GYIDYEKLEEKAMD----YRP 302 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~-~~~----~~~~~v~~~g~~~~vv~~~---------vd~~~-g~ID~d~Le~~i~~----~~p 302 (403)
++|++....+.|..... .+. +...........+..++++ .+.+. +..+++.+++.+++ .++
T Consensus 149 ~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~ 228 (451)
T 3oks_A 149 PAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNL 228 (451)
T ss_dssp CEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGE
T ss_pred CeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCE
Confidence 78888877665442100 000 0000000000122333332 11000 01234555455442 345
Q ss_pred cEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcC-CceE
Q 015647 303 KILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRG-PRGG 372 (403)
Q Consensus 303 klViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~G-P~GG 372 (403)
++|++++.+ .|...+ +++|+++|+++|++||+|.+|. |+...+.. ...++ ..|++++| |+|.+ .+-|
T Consensus 229 aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~t~s--K~l~~G~~iG 305 (451)
T 3oks_A 229 AAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT-GFARTGAMFACEHEGIDPDLIVTA--KGIAGGLPLS 305 (451)
T ss_dssp EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSSCE
T ss_pred EEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCccccchhhhhcCCCCCeeeeh--hhhhCCcceE
Confidence 667776532 234444 9999999999999999999986 33222211 01111 26788654 99854 3447
Q ss_pred EEEEeCC
Q 015647 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+++++++
T Consensus 306 ~v~~~~~ 312 (451)
T 3oks_A 306 AVTGRAE 312 (451)
T ss_dssp EEEEEHH
T ss_pred EEEECHH
Confidence 7777664
No 225
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=98.98 E-value=1.4e-08 Score=104.26 Aligned_cols=203 Identities=12% Similarity=0.010 Sum_probs=111.5
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc---
Q 015647 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL--- 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~--- 239 (403)
.+|.|.+|+...+.. +..+++. .+ ..+...++ .++++++++...+ -.++++||++||.+++..+.+
T Consensus 71 ~~p~v~~A~~~~l~~-~~~~~~~-~~--~~~~~~~l----a~~l~~~~~~~~~---~v~~~~sGseA~~~Aik~a~~~~~ 139 (476)
T 3i5t_A 71 GRREIVDAMAHQAMV-LPYASPW-YM--ATSPAARL----AEKIATLTPGDLN---RIFFTTGGSTAVDSALRFSEFYNN 139 (476)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCTT-TC--BCHHHHHH----HHHHHTTSSTTCC---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccC-cc--CCHHHHHH----HHHHHhcCCCCcC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 378999988877654 2212221 11 23333333 3468888865443 135566899999999988753
Q ss_pred -----CCCeEEecCCCCCccccccccCCccchh-----hhcccceEEeeeecCCCCCCCC--------HHHHHHHhcc--
Q 015647 240 -----PGDRIMGLDSPSGGHLSHGYHTPGGKKV-----SAASIFFESFPYKVNPQTGYID--------YEKLEEKAMD-- 299 (403)
Q Consensus 240 -----pGD~VL~~~~ehgghlsh~~~~~~~~~v-----~~~g~~~~vv~~~vd~~~g~ID--------~d~Le~~i~~-- 299 (403)
.+++|++....+.|... +.....+... ......+..++++........| +++|++++.+
T Consensus 140 ~~g~~~~~~vi~~~~~yHg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 218 (476)
T 3i5t_A 140 VLGRPQKKRIIVRYDGYHGSTA-LTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG 218 (476)
T ss_dssp HTTCTTCCEEEEETTCCCCSSH-HHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC
T ss_pred hcCCCCCCEEEEEcCCcCcCCh-hhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC
Confidence 35688888776644321 0000000000 0000112223322211010112 7899988864
Q ss_pred -CCCcEEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccc-cccccccc-ccCCCC-cccEEEEcCcCCCcC-
Q 015647 300 -YRPKILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKE-LASPFD-YCDIVTSTTHKSLRG- 368 (403)
Q Consensus 300 -~~pklViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~-~~~p~~-~aDivt~StHKtL~G- 368 (403)
.++++|++++.. .|...+ +++|+++|+++|++||+|.+|. +|-..... ....++ ..|+++++ |+|.|
T Consensus 219 ~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~s--K~l~~G 296 (476)
T 3i5t_A 219 PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFA--KGVTSG 296 (476)
T ss_dssp GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEEC--GGGGTT
T ss_pred CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhh--hhhcCC
Confidence 345677776532 243344 9999999999999999999987 33221100 010112 26888765 99865
Q ss_pred -CceEEEEEeCC
Q 015647 369 -PRGGIIFFRRG 379 (403)
Q Consensus 369 -P~GG~I~~~~~ 379 (403)
.+-|+++++++
T Consensus 297 ~~plg~v~~~~~ 308 (476)
T 3i5t_A 297 YVPLGGLAISEA 308 (476)
T ss_dssp SSCCEEEEECHH
T ss_pred CcCeEEEEECHH
Confidence 34477777664
No 226
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=98.95 E-value=7.1e-09 Score=108.81 Aligned_cols=147 Identities=18% Similarity=0.143 Sum_probs=98.4
Q ss_pred eEEeC-ChHHHHHHHHhh-----hccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHH
Q 015647 220 NVQPY-SCTSANFAVYTG-----LLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEK 292 (403)
Q Consensus 220 ~V~~~-SGT~An~aal~a-----ll~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~ 292 (403)
+|+++ ++++|+..++.+ +++|||+|++....|.+... ...+.+.+.+++++++++++ ..+|+++
T Consensus 167 ~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~---------~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 237 (546)
T 2zy4_A 167 NLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIE---------IPELAQYALEEVAINADPSLNWQYPDSE 237 (546)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHH---------HHHSTTSCCEEEEEECBGGGTTBCCHHH
T ss_pred eEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHH---------HHHHcCCCcEEEEEecCcccCCCCCHHH
Confidence 45555 467788888877 57899999999877654321 11222334556666665433 3599999
Q ss_pred HHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHH--HHcCCEEEEeccccccccccccccCCC---CcccEEEEcC
Q 015647 293 LEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIA--DKCGAVLMCDMAHISGLIAAKELASPF---DYCDIVTSTT 362 (403)
Q Consensus 293 Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Ia--ke~Ga~LivDaAh~~Glia~g~~~~p~---~~aDivt~St 362 (403)
|++++. .++|+|++...++ |.+.+ +++|.++| +++|+++++|.++.... . + ....+ ...++++.|+
T Consensus 238 l~~~~~-~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~-~-~-~~s~~~~~~~~~i~~~S~ 313 (546)
T 2zy4_A 238 LDKLKD-PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFA-D-D-FQSLFAICPENTLLVYSF 313 (546)
T ss_dssp HGGGGS-TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGS-T-T-CCCHHHHCGGGEEEEEES
T ss_pred HHHhhC-CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhc-c-c-CcCHHHhCCCCEEEEEeC
Confidence 988764 4678887665444 55555 66678888 78999999999987432 1 1 11111 1256889999
Q ss_pred cCCCc--CCceEEEEEeCC
Q 015647 363 HKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 363 HKtL~--GP~GG~I~~~~~ 379 (403)
+|+++ |-+.|+++.+++
T Consensus 314 SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 314 SKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp TTTTTCGGGCEEEEEEESS
T ss_pred ccccCCCCcceEEEEECCH
Confidence 99873 455699998775
No 227
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=98.93 E-value=9.6e-10 Score=112.91 Aligned_cols=82 Identities=20% Similarity=0.301 Sum_probs=56.3
Q ss_pred CHHHHHHHhccC-----CCcEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC---
Q 015647 289 DYEKLEEKAMDY-----RPKILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD--- 353 (403)
Q Consensus 289 D~d~Le~~i~~~-----~pklViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~--- 353 (403)
|+++|+++++++ ++++|++.+ ++.|.+.+ +++|+++|+++|++||+|++|. +|..+.......++
T Consensus 241 d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~ 320 (472)
T 1ohv_A 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDD 320 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCC
Confidence 688999998752 578888864 23566677 9999999999999999999997 34321110111111
Q ss_pred cccEEEEcCcCC-CcCCceEEEE
Q 015647 354 YCDIVTSTTHKS-LRGPRGGIIF 375 (403)
Q Consensus 354 ~aDivt~StHKt-L~GP~GG~I~ 375 (403)
..|++++| |+ +. ||+++
T Consensus 321 ~~Di~t~s--K~~l~---GG~~~ 338 (472)
T 1ohv_A 321 PADVMTFS--KKMMT---GGFFH 338 (472)
T ss_dssp CCSEEEEC--GGGSS---EEEEE
T ss_pred CCCEEEEc--ccccc---CCccC
Confidence 16888766 98 44 57766
No 228
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.92 E-value=1.9e-08 Score=103.64 Aligned_cols=158 Identities=19% Similarity=0.175 Sum_probs=93.8
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015647 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
+++++++..-. ...+.+|||+||..+++... ...++|+.....+.|+.. +... .. ......+....++
T Consensus 134 e~l~~~~p~~~----~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~-~~~~---~~-~~~~~~~~~~~~p- 203 (454)
T 4ao9_A 134 RLICERFPQIE----QLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVL-GFGA---RP-SPTTVPFDFLVLP- 203 (454)
T ss_dssp HHHHHHSTTCS----EEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTC-BBSS---SB-CTTSCCSEEEEEC-
T ss_pred HHHHHhCCCCC----EEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccc-cccc---cc-cCccCCCCcccCC-
Confidence 45777775332 13445689999999997653 234688888766655421 1100 00 0001112223222
Q ss_pred CCCCCCCCHHHHHHHhccCCCc--EEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccccCCCC
Q 015647 282 NPQTGYIDYEKLEEKAMDYRPK--ILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD 353 (403)
Q Consensus 282 d~~~g~ID~d~Le~~i~~~~pk--lViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~ 353 (403)
..|++.++++++++.++ .||+++ .+.|.+.+ +++|+++|+++|++||+|.+|. |-........-++
T Consensus 204 -----~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~g 277 (454)
T 4ao9_A 204 -----YNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLG 277 (454)
T ss_dssp -----TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHT
T ss_pred -----CchHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccC
Confidence 35899999999876544 466654 24455554 8999999999999999999997 6443221111111
Q ss_pred -cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015647 354 -YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 354 -~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
..|+++++ |.|.| -+.|+++++++
T Consensus 278 v~PDi~t~g--K~lggG~Piga~~~~~e 303 (454)
T 4ao9_A 278 IRSDLTTLG--KYIGGGMSFGAFGGRAD 303 (454)
T ss_dssp CCCSEEEEE--GGGGTTSSCEEEEECHH
T ss_pred CCCcEEEec--cccCCCCcceeeeeHHH
Confidence 26888654 77754 23466666654
No 229
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=98.79 E-value=3.6e-07 Score=92.30 Aligned_cols=214 Identities=15% Similarity=0.110 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHh-hhcccceeccC-------ccCcHHHHHHHHHHh-hhcCCCCCCCCccccchHHHHHHHHHHHHHHHH
Q 015647 138 EIFDIMEKEKQR-QFKGIELIASE-------NFVCRAVMEALGSHL-TNKYSEGYPGARYYTGNQYIDQIENLCFERALK 208 (403)
Q Consensus 138 ei~~li~~e~~r-q~~~l~LiaSe-------n~~~p~V~eA~~s~l-~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~ 208 (403)
.++.+.++-+.. ..+.|+|-.++ .++++.|.+++. .+ ......+|.. ..|... .|+.+++
T Consensus 15 ~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~---~~G~~~-------lr~aia~ 83 (405)
T 3k7y_A 15 NILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLL---GNGTED-------FSTLTQN 83 (405)
T ss_dssp HHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCT---TSSCHH-------HHHHHHH
T ss_pred hHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCC---CCCcHH-------HHHHHHH
Confidence 477777664432 24568887664 246888999876 32 2211112211 124321 1223333
Q ss_pred Hc-CCCC----CCCcce-EEeCChHHHHHHHHhhhcc--CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015647 209 AF-DLDS----DNWGVN-VQPYSCTSANFAVYTGLLL--PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 209 lf-g~~~----~~~~v~-V~~~SGT~An~aal~all~--pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
++ +... .+| +. +++.+|++|+.+++.+++. | |+|++..+.+.++.. .+...|. +++.++
T Consensus 84 ~~~~~~~~~~~~~~-i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~---------~~~~~g~--~~~~v~ 150 (405)
T 3k7y_A 84 LIFGNNSKYIEDKK-ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVN---------MIESRGF--NLKYIN 150 (405)
T ss_dssp HHHCSSCTTTTTTC-EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHH---------HHHTTTC--EEEEEC
T ss_pred HHcCCCCccccccc-eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHH---------HHHHcCC--eEEEEe
Confidence 33 3211 111 22 4555678899999988877 8 999999987755431 2333443 455555
Q ss_pred c-CCCCCCCCHHHHHHHhccC-CCcEEEEeCC-CC--Cccc---cHHHHHHHHHHcCCEEEEeccccccccccccc----
Q 015647 281 V-NPQTGYIDYEKLEEKAMDY-RPKILICGGS-SY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKEL---- 348 (403)
Q Consensus 281 v-d~~~g~ID~d~Le~~i~~~-~pklViv~~s-~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~---- 348 (403)
. ++++..+|++++++.+.+. ++++|++..+ ++ |..+ .+++|.++|+++++++++|.++. ++...+..
T Consensus 151 ~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~-~l~~~~~~~~~~ 229 (405)
T 3k7y_A 151 FFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQ-GFGHTNLEEDVL 229 (405)
T ss_dssp CEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCT-TTSSSSTTGGGH
T ss_pred ccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcc-cccCCCcccchH
Confidence 4 3335679999999998753 4578877643 34 5555 46778889999999999999864 23221100
Q ss_pred c-CCC-C-c-ccEEEEcCcCCC--cCCceEEEEE
Q 015647 349 A-SPF-D-Y-CDIVTSTTHKSL--RGPRGGIIFF 376 (403)
Q Consensus 349 ~-~p~-~-~-aDivt~StHKtL--~GP~GG~I~~ 376 (403)
. ..+ . . -=+++.|+.|++ .|-|-|+++.
T Consensus 230 ~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 230 LIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp HHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred HHHHHHhcCCcEEEEeeCCccCCCccccceEEEE
Confidence 0 001 1 1 126678999997 4777788864
No 230
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.15 E-value=1.9e-09 Score=111.35 Aligned_cols=197 Identities=15% Similarity=0.113 Sum_probs=114.7
Q ss_pred ccceeccCcc-----CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc-CCCCCCCcceEEeCCh
Q 015647 153 GIELIASENF-----VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF-DLDSDNWGVNVQPYSC 226 (403)
Q Consensus 153 ~l~LiaSen~-----~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf-g~~~~~~~v~V~~~SG 226 (403)
.|.++.+... .+|.|.+|+...+..... ..| .++...++ .+++++++ +.+. .++++||
T Consensus 102 yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~-----~~~--~~~~~~~L----ae~L~~~~p~~~~-----v~~~nSG 165 (465)
T 2yky_A 102 YVNFLGEYTAGLFGHSHPVIRAAVERALAVGLN-----LST--QTENEALF----AEAVCDRFPSIDL-----VRFTNSG 165 (465)
Confidence 4555544331 378999998776544211 111 12222233 44688888 4433 3556789
Q ss_pred HHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc--CCC
Q 015647 227 TSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD--YRP 302 (403)
Q Consensus 227 T~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~--~~p 302 (403)
++||.+++..+. ..+|+|++.+..+.|+.. +.+ .+ + ...|....++.++ ..|+++|++++++ .++
T Consensus 166 seA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~-~~~--sg-~-~~~g~~~~~~~~~------~~d~~~l~~~l~~~~~~~ 234 (465)
T 2yky_A 166 TEANLMALATATAITGRKTVLAFDGGYHGGLL-NFA--SG-H-APTNAPYHVVLGV------YNDVEGTADLLKRHGHDC 234 (465)
Confidence 999999998652 456899988866644321 110 00 0 0011100122222 2478999998874 356
Q ss_pred cEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcC-CceEEE
Q 015647 303 KILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRG-PRGGII 374 (403)
Q Consensus 303 klViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~G-P~GG~I 374 (403)
++|++++. +.|...+ +++|+++|+++|++||+|.+|. +-.........++ ..|++ |+.|+++| -+.|++
T Consensus 235 aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~--t~sK~lg~G~piG~v 311 (465)
T 2yky_A 235 AAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLT--TLGKYIGGGMSFGAF 311 (465)
Confidence 78877642 3455555 9999999999999999999999 5321111111111 25766 56799865 234777
Q ss_pred EEeCC
Q 015647 375 FFRRG 379 (403)
Q Consensus 375 ~~~~~ 379 (403)
+++++
T Consensus 312 ~~~~~ 316 (465)
T 2yky_A 312 GGRRD 316 (465)
Confidence 77765
No 231
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=98.61 E-value=5.1e-07 Score=91.93 Aligned_cols=233 Identities=15% Similarity=0.145 Sum_probs=130.5
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHhhhcccceecc-------CccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHH
Q 015647 125 RAWGNQSLPLADPEIFDIMEKEKQRQFKGIELIAS-------ENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQ 197 (403)
Q Consensus 125 ~~~~~~~l~~~d~ei~~li~~e~~rq~~~l~LiaS-------en~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~ 197 (403)
..|.+-+..- ...|+.+.+.-+.....+|+|--+ ..++.|.|++|....+.....-+|.. ..|.+..
T Consensus 19 ~~~~~v~~~p-~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p---~~G~p~l-- 92 (420)
T 4h51_A 19 ERWQKIQAQA-PDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLP---ISGYQPF-- 92 (420)
T ss_dssp HHHHTCCCCC-CCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCC---TTCCHHH--
T ss_pred HHHhCCCCCC-CChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCC---cCChHHH--
Confidence 3465533332 236777776644434457888766 34567999999765554332212211 1244321
Q ss_pred HHHHHHHHHHH-HcCCCCCC-CcceEEeCChHHHHHHHHh----hhccCCCeEEecCCCCCccccccccCCccchhhhcc
Q 015647 198 IENLCFERALK-AFDLDSDN-WGVNVQPYSCTSANFAVYT----GLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS 271 (403)
Q Consensus 198 lE~~arerla~-lfg~~~~~-~~v~V~~~SGT~An~aal~----all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g 271 (403)
|+.+++ +||-.... --+.++..+||.|+..++. .++.|||+|+++++.+..|.. .+...|
T Consensus 93 -----r~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~---------i~~~aG 158 (420)
T 4h51_A 93 -----IDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYG---------VVKAAG 158 (420)
T ss_dssp -----HHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHH---------HHHHTT
T ss_pred -----HHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHH---------HHHHcC
Confidence 122223 34533211 0023455678888766554 345799999999987766531 133444
Q ss_pred cc-eEEeeeecCCCCCCCCHHHHHHHhccCC--CcEEEEeCCCC--Ccc---ccHHHHHHHHHHcCCEEEEecccccccc
Q 015647 272 IF-FESFPYKVNPQTGYIDYEKLEEKAMDYR--PKILICGGSSY--PRE---WDYGRFRQIADKCGAVLMCDMAHISGLI 343 (403)
Q Consensus 272 ~~-~~vv~~~vd~~~g~ID~d~Le~~i~~~~--pklViv~~s~~--g~~---~Di~~I~~Iake~Ga~LivDaAh~~Gli 343 (403)
.. +...++ .++++..+|.+.+.+.++... +++++....++ |.. -.+++|.++|+++++++++|.+ ..|+.
T Consensus 159 ~~~V~~~~~-~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~-Y~~~~ 236 (420)
T 4h51_A 159 WKNICTYAY-YDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSA-YQGYA 236 (420)
T ss_dssp CCCEEEEEC-EEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEES-CTTTT
T ss_pred CeEEEeecc-ccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehh-hhhhc
Confidence 32 222222 233456789999888876433 34555554444 433 3688999999999999999998 34443
Q ss_pred ccccccCCC------Cc--ccEEEEcCcCCC--cCCceEEEEEeCC
Q 015647 344 AAKELASPF------DY--CDIVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 344 a~g~~~~p~------~~--aDivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
..+....++ +. -=+++.|+.|++ .|-|-|+++....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~ 282 (420)
T 4h51_A 237 SGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLK 282 (420)
T ss_dssp TSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECS
T ss_pred cCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEeccc
Confidence 322111111 01 126778999975 5677788877654
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.45 E-value=1.5e-05 Score=82.02 Aligned_cols=171 Identities=13% Similarity=-0.029 Sum_probs=86.2
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh--ccCCCeEEecCCCCCccccccccCCccchhhh---cc---cceE
Q 015647 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL--LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSA---AS---IFFE 275 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~al--l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~---~g---~~~~ 275 (403)
+++++++..+..+ ..++++||++||..+++.. .....+|+.....|.|+.. +.+.-.+..... .+ ..+.
T Consensus 114 e~L~~~~p~~~~~--~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~-~als~t~~~~~~~~~~~p~~~~~~ 190 (456)
T 4atq_A 114 EQLNRLTPGDHAK--RTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTN-LTMALTAKAMPYKTNFGPFAPEVY 190 (456)
T ss_dssp HHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSH-HHHHHCCCCTTTTTTSCSCCSSEE
T ss_pred HHHHHhCCCCCCc--EEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccc-cccccccCccccccCCCCccccce
Confidence 3567777543211 1244569999999998754 2345688888776655421 100000000000 00 0112
Q ss_pred Eeeeec--CCC-CCCCCHHHHHHHhc-------cCCCcEEEEeCC--CCCccc----cHHHHHHHHHHcCCEEEEecccc
Q 015647 276 SFPYKV--NPQ-TGYIDYEKLEEKAM-------DYRPKILICGGS--SYPREW----DYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 276 vv~~~v--d~~-~g~ID~d~Le~~i~-------~~~pklViv~~s--~~g~~~----Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
.++++. ... ....+.+.++..+. ..+...||+++. +.|.+. =+++|+++|+++|++||+|.+|.
T Consensus 191 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~t 270 (456)
T 4atq_A 191 RMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQS 270 (456)
T ss_dssp EECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT
T ss_pred ecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEeccccc
Confidence 222221 110 11223343333332 223455677642 233332 28999999999999999999987
Q ss_pred c-cccccccccCCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015647 340 S-GLIAAKELASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 340 ~-Glia~g~~~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
- |-.........++ ..|+++++ |.+.| -+-|+++.+++
T Consensus 271 G~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P~~av~~~~~ 311 (456)
T 4atq_A 271 GFCRTGEWFAVDHEGVVPDIITMA--KGIAGGLPLSAITGRAD 311 (456)
T ss_dssp TTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCEEEEEEHH
T ss_pred ccCCccccccccccCCCCchhhhh--hcccCcCCceeeEecHH
Confidence 4 3332211111122 27999876 77754 22355555543
No 233
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=98.31 E-value=5e-07 Score=89.86 Aligned_cols=130 Identities=14% Similarity=0.063 Sum_probs=78.2
Q ss_pred eEEeCC-hHHHHHHHHhhhccCCC----eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHH
Q 015647 220 NVQPYS-CTSANFAVYTGLLLPGD----RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLE 294 (403)
Q Consensus 220 ~V~~~S-GT~An~aal~all~pGD----~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le 294 (403)
+|++++ +++|+.+++.+++++|| +|++....|.+.. ..+...|. +++.+++|.+ + ++
T Consensus 93 ~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~---------~~~~~~g~--~~~~~~~d~~-~-l~----- 154 (391)
T 3bwn_A 93 YIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYV---------EETTYVRS--GMYKWEGDAW-G-FD----- 154 (391)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHH---------HHHHTTCB--TTEEEEEEST-T-CC-----
T ss_pred eEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHH---------HHHHHcCC--eEEEecCCHH-H-cC-----
Confidence 455555 56899999999999999 9999998775542 12233343 3344555432 1 22
Q ss_pred HHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCc--CCc
Q 015647 295 EKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLR--GPR 370 (403)
Q Consensus 295 ~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~--GP~ 370 (403)
..++|+|++...++ |.+++ +|++.++.+++++++|.+|..+... .+.. ....++++.|++|+++ |.+
T Consensus 155 ----~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~~--~l~~-~~~~~i~~~S~SK~~g~~GlR 225 (391)
T 3bwn_A 155 ----KKGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHYT--PITR-RQDHDIMLFTFSKITGHAGSR 225 (391)
T ss_dssp ----CCSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTTS--CCCC-CBCCSEEEEEHHHHHSCGGGC
T ss_pred ----CCCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCCC--cccc-CCCCeEEEEechhhcCCCccc
Confidence 13688887665444 55554 4443222233999999999743110 0111 1136799999999863 444
Q ss_pred eEEEEE
Q 015647 371 GGIIFF 376 (403)
Q Consensus 371 GG~I~~ 376 (403)
-|+++.
T Consensus 226 iG~~~~ 231 (391)
T 3bwn_A 226 IGWALV 231 (391)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 499887
No 234
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=98.09 E-value=9.9e-07 Score=89.16 Aligned_cols=129 Identities=11% Similarity=0.007 Sum_probs=81.7
Q ss_pred eEEeC-ChHHHHHHHHhhh--------ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCH
Q 015647 220 NVQPY-SCTSANFAVYTGL--------LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDY 290 (403)
Q Consensus 220 ~V~~~-SGT~An~aal~al--------l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~ 290 (403)
+|+++ ++++|+.+++.++ ++|||+|++..+.|.+.. ..+...|.. ++.+ .+|+
T Consensus 125 ~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~---------~~~~~~g~~--~~~~-------~~d~ 186 (427)
T 2hox_A 125 YIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFR---------EQTKYFDKK--GYVW-------AGNA 186 (427)
T ss_dssp EEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHH---------HHHHHSCBT--TEEE-------EEEG
T ss_pred EEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHH---------HHHHHcCCe--eeee-------cCCH
Confidence 34444 5678999999999 999999999988764432 122333322 2222 3567
Q ss_pred HHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCC-CcccEEEEcCcCCCc
Q 015647 291 EKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF-DYCDIVTSTTHKSLR 367 (403)
Q Consensus 291 d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~-~~aDivt~StHKtL~ 367 (403)
++|++++.+ ++|+|++...++ |.+.+ + +++ ++..++|.++.-.... . ..+ ...++++.|++|+++
T Consensus 187 ~~l~~~~~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s--~--~~~~~~~~i~~~S~SK~~g 254 (427)
T 2hox_A 187 ANYVNVSNP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYT--P--IKYKADEDILLFTMSKFTG 254 (427)
T ss_dssp GGGTTCSCG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTS--C--CCSCBCCSEEEEEHHHHTS
T ss_pred HHHHHhhcC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCC--c--cccCCCceEEEEeChhcCC
Confidence 888877754 578877764444 56677 3 333 5678889876421111 0 111 237899999999863
Q ss_pred --CCceEEEEEeC
Q 015647 368 --GPRGGIIFFRR 378 (403)
Q Consensus 368 --GP~GG~I~~~~ 378 (403)
|.+.|++++++
T Consensus 255 ~~G~RiG~~~~~~ 267 (427)
T 2hox_A 255 HSGSRFGWALIKD 267 (427)
T ss_dssp CGGGCCEEEEECC
T ss_pred CCCceEEEEEECC
Confidence 34459999853
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.73 E-value=0.00043 Score=71.41 Aligned_cols=169 Identities=16% Similarity=0.041 Sum_probs=83.8
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-------cCC-CeEEecCCCCCccccccccCCccchhh-hcc---
Q 015647 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL-------LPG-DRIMGLDSPSGGHLSHGYHTPGGKKVS-AAS--- 271 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all-------~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~-~~g--- 271 (403)
+++++++..+.. -..+..||++||..+++... +++ .+||+....|.|... +.+...+.... ..+
T Consensus 118 e~L~~~~p~~~~---~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~-~a~s~tg~~~~~~~~~~~ 193 (473)
T 4e3q_A 118 EKLVEVSPFDSG---RVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTA-VSASMTGKPYNSVFGLPL 193 (473)
T ss_dssp HHHHHHSSCSSC---EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSH-HHHHHSCCGGGGGGTCSC
T ss_pred HHHHhhCCCCcc---EEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCcc-ccccccccccccccCCCC
Confidence 457777765432 12344689999999987542 133 468877766544321 10000000000 000
Q ss_pred cceEEeeee----cCCCCCCC-------CHHHHHHHhccCC---CcEEEEeCC--CCCccc----cHHHHHHHHHHcCCE
Q 015647 272 IFFESFPYK----VNPQTGYI-------DYEKLEEKAMDYR---PKILICGGS--SYPREW----DYGRFRQIADKCGAV 331 (403)
Q Consensus 272 ~~~~vv~~~----vd~~~g~I-------D~d~Le~~i~~~~---pklViv~~s--~~g~~~----Di~~I~~Iake~Ga~ 331 (403)
..+..++++ ... .+.. ..+++++.+.+.. ...||+++. +.|.+. =+++|+++|+++|++
T Consensus 194 ~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gil 272 (473)
T 4e3q_A 194 PGFVHLTCPHYWRYGE-EGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIP 272 (473)
T ss_dssp TTEEEECCCCHHHHSC-TTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCC
T ss_pred CcccccCCCccccccc-ccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceE
Confidence 011111111 111 1111 1345555554332 345666542 334332 289999999999999
Q ss_pred EEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcC--CceEEEEEeCC
Q 015647 332 LMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 332 LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~G--P~GG~I~~~~~ 379 (403)
||+|..|. +|-.........++ ..|+++++ |.|.| .+-|+++++++
T Consensus 273 LI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~--K~l~gG~~Pl~av~~~~~ 322 (473)
T 4e3q_A 273 VISDEVICGFGRTGNTWGCVTYDFTPDAIISS--KNLTAGFFPMGAVILGPE 322 (473)
T ss_dssp EEEECTTTSSSTTSSSCHHHHTTCCCSEEEEC--GGGGTTSSCCEEEEECHH
T ss_pred EeccCccccCCcccchhHHHhcCCCCChHHhc--ccccCCCCCcccccccHH
Confidence 99999976 23222111001111 26998765 88754 34455555543
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=97.59 E-value=0.00054 Score=75.44 Aligned_cols=87 Identities=10% Similarity=-0.043 Sum_probs=51.1
Q ss_pred HHHHHHhcc-------CCCcEEEEeCC--C-CCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-c
Q 015647 291 EKLEEKAMD-------YRPKILICGGS--S-YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-Y 354 (403)
Q Consensus 291 d~Le~~i~~-------~~pklViv~~s--~-~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~ 354 (403)
++|++++++ .++..||+++. . .|...+ +++|+++|++||++||+|.+|. +|-.+.......++ .
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~ 656 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCK 656 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSC
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCC
Confidence 567777752 22356777653 2 244332 8999999999999999999876 33322111000011 2
Q ss_pred ccEEEEcCcCCCcC--CceEEEEEeCC
Q 015647 355 CDIVTSTTHKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 355 aDivt~StHKtL~G--P~GG~I~~~~~ 379 (403)
.|++| +-|.|.| -+-|+++++++
T Consensus 657 PDiit--lsK~L~gG~~Plgav~~~~~ 681 (831)
T 4a0g_A 657 PDIAC--FAKLLTGGMVPLAVTLATDA 681 (831)
T ss_dssp CSEEE--ECGGGGTTSSCCEEEEECHH
T ss_pred CcEEE--EecccccCccCcEEEEECHH
Confidence 58875 5699865 12266666654
No 237
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=63.73 E-value=11 Score=32.67 Aligned_cols=61 Identities=10% Similarity=-0.075 Sum_probs=45.2
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcC---CEEEEecc
Q 015647 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCG---AVLMCDMA 337 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~G---a~LivDaA 337 (403)
.+|+++.++. .+.++++.+.+.+.+|++|.++.........++++.+..++.| +.+++=+.
T Consensus 45 ~G~eVi~lG~-----~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 45 AGFEVVYTGL-----RQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp TTCEEECCCS-----BCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 4577776553 4789999999988899999887666666677888888888765 56666553
No 238
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=54.66 E-value=22 Score=31.56 Aligned_cols=62 Identities=16% Similarity=0.090 Sum_probs=46.2
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcC----CEEEEeccc
Q 015647 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCG----AVLMCDMAH 338 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~G----a~LivDaAh 338 (403)
.+|+++.++. .+.++++.+.+++.+|++|.+..........++++.+..++.| +.+++=++.
T Consensus 115 ~G~~v~~LG~-----~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~~ 180 (210)
T 1y80_A 115 GGFTVYNLGV-----DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGAP 180 (210)
T ss_dssp TTCEEEECCS-----SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEESTT
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECCC
Confidence 4577777654 3789999999988899999887655555567788887777765 788887653
No 239
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=49.57 E-value=39 Score=31.83 Aligned_cols=60 Identities=13% Similarity=0.298 Sum_probs=46.2
Q ss_pred ceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCC---ccccHHHHHHHHHHcC----CEEEEecc
Q 015647 273 FFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYP---REWDYGRFRQIADKCG----AVLMCDMA 337 (403)
Q Consensus 273 ~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g---~~~Di~~I~~Iake~G----a~LivDaA 337 (403)
+|+++.+.. .+.++++.+.+.+.++++|.++..... ....++++.+.+++.| +.+++=++
T Consensus 157 G~eVi~LG~-----~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 157 MIDAYNLGS-----QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp TEEEEECCS-----SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred CcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 578777654 478999999998889999988766665 5556777888778776 77887775
No 240
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=49.56 E-value=17 Score=30.34 Aligned_cols=61 Identities=18% Similarity=0.169 Sum_probs=43.8
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcC---CEEEEecc
Q 015647 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCG---AVLMCDMA 337 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~G---a~LivDaA 337 (403)
.+|+++++.. .+.++++.+.+.+.++++|.++.+.......++++.+..++.| +.+++=++
T Consensus 30 ~G~~Vi~lG~-----~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 30 AGFNVVNIGV-----LSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp TTCEEEEEEE-----EECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 4578887764 3789999999888889998887655555556777777777654 56666554
No 241
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=46.70 E-value=27 Score=32.78 Aligned_cols=58 Identities=16% Similarity=0.222 Sum_probs=42.1
Q ss_pred CCC-CCHHHHHHHhcc----CCCcEEEEe----C-CCCCc-cccHHHHHHHHHHcCCEEEEeccccccc
Q 015647 285 TGY-IDYEKLEEKAMD----YRPKILICG----G-SSYPR-EWDYGRFRQIADKCGAVLMCDMAHISGL 342 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~~----~~pklViv~----~-s~~g~-~~Di~~I~~Iake~Ga~LivDaAh~~Gl 342 (403)
+|. .+++++..++.. ..++++++. . ++|+. ..|+..|..+.+.++.++++|.+|+.|.
T Consensus 137 ~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 137 RGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 455 388888776632 245777665 2 35653 5688899888888899999999999885
No 242
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=44.51 E-value=19 Score=35.92 Aligned_cols=57 Identities=21% Similarity=0.324 Sum_probs=42.6
Q ss_pred CCC-CCHHHHHHHhcc----CCCcEEEEe--CCCCCc----cccHHHHHHHHHHcCCEEEEecccccc
Q 015647 285 TGY-IDYEKLEEKAMD----YRPKILICG--GSSYPR----EWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~~----~~pklViv~--~s~~g~----~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
+|. -++++++.+++. .+++++++. .+.|+. ..|+..|..+.+..+.++++|.+|+.|
T Consensus 256 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 256 RGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 455 788888776542 245787775 455653 468999988888899999999999987
No 243
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=41.39 E-value=32 Score=31.09 Aligned_cols=61 Identities=11% Similarity=-0.003 Sum_probs=45.3
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE--eCCCCCccccHHHHHHHHHHcC----CEEEEecc
Q 015647 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC--GGSSYPREWDYGRFRQIADKCG----AVLMCDMA 337 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv--~~s~~g~~~Di~~I~~Iake~G----a~LivDaA 337 (403)
.+|+++.+..+ +.++++.+.+.+++|++|.+ +....+....++++.+..++.| +.+++=++
T Consensus 119 ~G~~Vi~LG~~-----vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 119 NGFQIVDLGVD-----VLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGA 185 (215)
T ss_dssp TSCEEEECCSS-----CCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESS
T ss_pred CCCeEEEcCCC-----CCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECC
Confidence 45788877643 78999988888889999888 5444455566888888888775 57777664
No 244
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=41.13 E-value=15 Score=36.29 Aligned_cols=28 Identities=11% Similarity=0.189 Sum_probs=25.6
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4678889999999999999999999985
No 245
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=40.47 E-value=77 Score=31.52 Aligned_cols=84 Identities=19% Similarity=0.086 Sum_probs=56.2
Q ss_pred CCCCCHHHHHHHhc---cC-CCcEEEE-eCCCCCc---cccHHHHHHHHHHc-CCEEEEecccccc-ccccccccCCCCc
Q 015647 285 TGYIDYEKLEEKAM---DY-RPKILIC-GGSSYPR---EWDYGRFRQIADKC-GAVLMCDMAHISG-LIAAKELASPFDY 354 (403)
Q Consensus 285 ~g~ID~d~Le~~i~---~~-~pklViv-~~s~~g~---~~Di~~I~~Iake~-Ga~LivDaAh~~G-lia~g~~~~p~~~ 354 (403)
+|.-++++++.+++ .. ..+++++ +.+.|+. ..|+..|..+.+.+ ++++ .|..|..| .... ..... -+
T Consensus 165 tGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G~~~~~-~AAvA-lG 241 (385)
T 1vli_A 165 TAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSEHPTEAP-CAAVR-LG 241 (385)
T ss_dssp CTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEECCSSSSHHH-HHHHH-TT
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCCCCCCchHHH-HHHHH-cC
Confidence 46567888877653 22 2477766 4567864 56899999999999 8887 78999999 3211 00000 13
Q ss_pred ccEE--EEcCcCCCcCCce
Q 015647 355 CDIV--TSTTHKSLRGPRG 371 (403)
Q Consensus 355 aDiv--t~StHKtL~GP~G 371 (403)
||++ -++..|++.||.+
T Consensus 242 A~iIEkHftldra~~G~D~ 260 (385)
T 1vli_A 242 AKLIEKHFTIDKNLPGADH 260 (385)
T ss_dssp CSEEEEEBCSCTTSSCSSC
T ss_pred CCEEEeCCCccccCCCCch
Confidence 7766 4688899888865
No 246
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=35.40 E-value=53 Score=31.06 Aligned_cols=57 Identities=16% Similarity=0.234 Sum_probs=41.9
Q ss_pred CCC-CCHHHHHHHhcc----CCCcEEEEe-C-CCC---C-ccccHHHHHHHHHHcCCEEEEecccccc
Q 015647 285 TGY-IDYEKLEEKAMD----YRPKILICG-G-SSY---P-REWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~~----~~pklViv~-~-s~~---g-~~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
+|. .++++++.+++. .+++++++. . ++| + ...|+..|..+.+.+|.++++|.+|+.|
T Consensus 152 ~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g 219 (276)
T 1vs1_A 152 RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAG 219 (276)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 565 488888776642 246777765 3 344 2 3578999998887789999999999998
No 247
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=34.78 E-value=32 Score=33.81 Aligned_cols=57 Identities=19% Similarity=0.290 Sum_probs=41.6
Q ss_pred CCC-CCHHHHHHHhcc----CCCcEEEEe--CCCC----CccccHHHHHHHHHHcCCEEEEecccccc
Q 015647 285 TGY-IDYEKLEEKAMD----YRPKILICG--GSSY----PREWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~~----~~pklViv~--~s~~----g~~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
+|. .++++++.+++. .+++++++. .++| ....|+..|..+.+.++.++++|.+|+.|
T Consensus 220 ~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 220 RGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 455 488887776642 346787773 3334 24578999888888889999999999998
No 248
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=34.70 E-value=39 Score=32.28 Aligned_cols=56 Identities=23% Similarity=0.371 Sum_probs=37.9
Q ss_pred CCC-CCHHHHHHHhc----cCCCcEEEEe-CCCCCc---cccHHHHHHHHHHc-CCEEEEeccccc
Q 015647 285 TGY-IDYEKLEEKAM----DYRPKILICG-GSSYPR---EWDYGRFRQIADKC-GAVLMCDMAHIS 340 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~----~~~pklViv~-~s~~g~---~~Di~~I~~Iake~-Ga~LivDaAh~~ 340 (403)
+|. .++++++.+++ .-+.+++++. .++|+. ..|+..|..+.+.. |.++++|.+|+.
T Consensus 141 ~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~ 206 (285)
T 3sz8_A 141 KPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSL 206 (285)
T ss_dssp CCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCcc
Confidence 444 45555544432 3346788775 445553 35899998887777 799999999994
No 249
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=33.79 E-value=50 Score=30.50 Aligned_cols=61 Identities=8% Similarity=0.112 Sum_probs=45.1
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcC--CEEEEecc
Q 015647 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCG--AVLMCDMA 337 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~G--a~LivDaA 337 (403)
.+|+++.++.+ +.++++.+.+.+.+|++|.+.....+....++++.+..++.| +.+++=++
T Consensus 150 ~G~~Vi~LG~~-----vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~ 212 (258)
T 2i2x_B 150 NGYNVVDLGRD-----VPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGG 212 (258)
T ss_dssp TTCEEEEEEEE-----CCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEEST
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECc
Confidence 45788777653 678899888888889999887665566667888887777765 66766554
No 250
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=32.99 E-value=25 Score=34.84 Aligned_cols=28 Identities=14% Similarity=0.347 Sum_probs=24.9
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 64 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 64 AEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3567788999999999999999999986
No 251
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=32.89 E-value=25 Score=35.27 Aligned_cols=28 Identities=7% Similarity=0.020 Sum_probs=25.0
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++++-||+.|+.||+|.+
T Consensus 73 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 73 TKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3567888999999999999999999985
No 252
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=32.07 E-value=24 Score=35.13 Aligned_cols=28 Identities=11% Similarity=0.038 Sum_probs=25.1
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 59 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 59 SRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3578888999999999999999999984
No 253
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=31.68 E-value=26 Score=35.22 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=25.0
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.||+..|++++.+-||+.|+.||.|.+
T Consensus 74 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 74 PQYGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3577788999999999999999999985
No 254
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=31.13 E-value=28 Score=34.94 Aligned_cols=28 Identities=11% Similarity=0.080 Sum_probs=25.0
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++++-||+.|+.||+|.+
T Consensus 77 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 77 TKYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3577788999999999999999999985
No 255
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=31.01 E-value=28 Score=34.86 Aligned_cols=27 Identities=11% Similarity=0.024 Sum_probs=24.6
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.+|...|++++++-||+.|+.||+|.+
T Consensus 76 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 76 KYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 477788999999999999999999984
No 256
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=30.70 E-value=78 Score=26.10 Aligned_cols=52 Identities=10% Similarity=-0.064 Sum_probs=38.6
Q ss_pred CCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEecccc
Q 015647 287 YIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 287 ~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
.++.++++.+++. +|.+|+++.-.......-+++.+..++.|+-+-+-.+..
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T~~ 99 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTEQ 99 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECHHH
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCHHH
Confidence 4889999998874 699999986666654233677888889998887766543
No 257
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=30.32 E-value=29 Score=35.28 Aligned_cols=28 Identities=21% Similarity=0.287 Sum_probs=25.2
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++++-||+.|+.||+|.+
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3578889999999999999999999985
No 258
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=30.29 E-value=30 Score=33.99 Aligned_cols=28 Identities=14% Similarity=0.169 Sum_probs=25.0
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567788999999999999999999984
No 259
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=30.12 E-value=30 Score=34.63 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=24.6
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 92 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 92 ENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567778999999999999999999985
No 260
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=30.05 E-value=30 Score=34.37 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=25.1
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4577888999999999999999999985
No 261
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=28.92 E-value=41 Score=31.83 Aligned_cols=55 Identities=18% Similarity=0.361 Sum_probs=37.9
Q ss_pred CCC-CCHHHHHHHhc----cCCCcEEEEe-CCCCCcc---ccHHHHHHHHHHc-CCEEEEecccc
Q 015647 285 TGY-IDYEKLEEKAM----DYRPKILICG-GSSYPRE---WDYGRFRQIADKC-GAVLMCDMAHI 339 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~----~~~pklViv~-~s~~g~~---~Di~~I~~Iake~-Ga~LivDaAh~ 339 (403)
+|. .++++++.++. ..+++++++. .++|+.. .|+..|..+.+.. +.++++|.+|+
T Consensus 136 ~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~ 200 (280)
T 2qkf_A 136 KPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHS 200 (280)
T ss_dssp CCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHhCCCCCEEEECCCC
Confidence 444 36666665543 2346777664 3455543 5888888887777 89999999999
No 262
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=28.24 E-value=35 Score=34.86 Aligned_cols=28 Identities=11% Similarity=0.204 Sum_probs=25.3
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4678888999999999999999999984
No 263
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=28.05 E-value=54 Score=32.22 Aligned_cols=41 Identities=20% Similarity=0.259 Sum_probs=28.0
Q ss_pred CCcEEEEe--CC--CCCccccHHHHHHHHHHcCCE--EEEeccccccc
Q 015647 301 RPKILICG--GS--SYPREWDYGRFRQIADKCGAV--LMCDMAHISGL 342 (403)
Q Consensus 301 ~pklViv~--~s--~~g~~~Di~~I~~Iake~Ga~--LivDaAh~~Gl 342 (403)
++.++++. .. +| ...|+..+.++.++.|.. +|+|++|+.+-
T Consensus 226 N~~~~lilRG~~~~ny-~~~di~~~~~~l~~~~lp~~VivD~SH~ns~ 272 (350)
T 1n8f_A 226 NGDCHIILRGGKEPNY-SAKHVAEVKEGLNKAGLPAQVMIDFSHANSS 272 (350)
T ss_dssp CSCEEEEECCSSSCCC-SHHHHHHHHHHHHHTTCCCCEEEECSGGGTT
T ss_pred CCCEEEEECCCCCCCC-CHHHHHHHHHHHHHcCCCCeEEEECCCcccC
Confidence 35555552 22 23 345777777666778999 99999998864
No 264
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=27.96 E-value=30 Score=34.73 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=24.9
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 76 p~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 76 PDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3567788999999999999999999995
No 265
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=27.49 E-value=33 Score=34.44 Aligned_cols=28 Identities=18% Similarity=0.241 Sum_probs=24.8
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 92 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 92 SNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567778999999999999999999985
No 266
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=27.31 E-value=44 Score=31.88 Aligned_cols=55 Identities=16% Similarity=0.319 Sum_probs=37.5
Q ss_pred CCC-CCHHHHHHHhc----cCCCcEEEEe-CCCCCcc---ccHHHHHHHHHHc-CCEEEEecccc
Q 015647 285 TGY-IDYEKLEEKAM----DYRPKILICG-GSSYPRE---WDYGRFRQIADKC-GAVLMCDMAHI 339 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~----~~~pklViv~-~s~~g~~---~Di~~I~~Iake~-Ga~LivDaAh~ 339 (403)
+|. .++++++.++. ..+++++++. .++|+.. .|+..|..+.+.. +.++++|.+|+
T Consensus 139 ~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~ 203 (292)
T 1o60_A 139 KPQFLSPSQMGNIVEKIEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHS 203 (292)
T ss_dssp CCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHhhCCCCCEEEECCCc
Confidence 444 36666665543 2346777664 3345433 6999998877777 89999999999
No 267
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=26.46 E-value=32 Score=34.35 Aligned_cols=28 Identities=11% Similarity=0.079 Sum_probs=24.3
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 91 p~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 91 PILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp GGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3567778999999999999999999985
No 268
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=26.46 E-value=1.8e+02 Score=27.55 Aligned_cols=36 Identities=8% Similarity=0.064 Sum_probs=26.3
Q ss_pred CcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 302 PKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 302 pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.++|++..-..+....+.++.+.|++.|+.+++|..
T Consensus 187 ~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 222 (352)
T 4e84_A 187 HDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPK 222 (352)
T ss_dssp CSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 577777532223333588999999999999999985
No 269
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=26.13 E-value=34 Score=33.91 Aligned_cols=28 Identities=18% Similarity=0.284 Sum_probs=24.7
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.||...|++++.+-||+.|+.||.|.+
T Consensus 76 p~~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 76 PNFGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4678888999999999999999999985
No 270
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=25.85 E-value=33 Score=33.97 Aligned_cols=27 Identities=22% Similarity=0.332 Sum_probs=24.0
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.+|...|++++.+-||+.|+.||+|.+
T Consensus 79 ~~Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 79 EYGTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 456778999999999999999999985
No 271
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=25.65 E-value=30 Score=34.69 Aligned_cols=27 Identities=11% Similarity=0.191 Sum_probs=24.5
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.+|...|++++.+-||+.|+.||+|.+
T Consensus 70 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 70 RSGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp TTEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 477788999999999999999999984
No 272
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=25.55 E-value=77 Score=24.03 Aligned_cols=51 Identities=10% Similarity=0.024 Sum_probs=34.0
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEE-eccccccc
Q 015647 290 YEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMC-DMAHISGL 342 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~Liv-DaAh~~Gl 342 (403)
..++.++++..+.++|++....-+ .=.+.|..+|++++++++. +.-.-+|.
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~lc~~~~Ip~~~v~sk~eLG~ 67 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAKDADP--ILTSSVVSLAEDQGISVSMVESMKKLGK 67 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEETTSCH--HHHHHHHHHHHHHTCCEEEESCHHHHHH
T ss_pred HHHHHHHHHcCCeeEEEEeCCCCH--HHHHHHHHHHHHcCCCEEEECCHHHHHH
Confidence 567778888777788887653333 2356788899999998765 33333443
No 273
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=25.50 E-value=41 Score=32.33 Aligned_cols=55 Identities=20% Similarity=0.247 Sum_probs=37.3
Q ss_pred CCC-CCHHHHHHHhc----cCCCcEEEEe-CCCCCc---cccHHHHHHHHHHcCCEEEEeccccc
Q 015647 285 TGY-IDYEKLEEKAM----DYRPKILICG-GSSYPR---EWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~----~~~pklViv~-~s~~g~---~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
+|. .++++++.+++ ..+.+++++. .++|+. ..|+..|..+.+ .+.++++|.+|+.
T Consensus 162 ~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~D~sHsv 225 (298)
T 3fs2_A 162 KGQFLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-LGAPVIFDATHSV 225 (298)
T ss_dssp CCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-TTSCEEEEHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-cCCcEEEcCCCcc
Confidence 454 46665554443 2346788775 345553 258999888765 9999999999984
No 274
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=25.23 E-value=40 Score=34.62 Aligned_cols=28 Identities=29% Similarity=0.369 Sum_probs=24.7
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 74 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 74 KEYGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3567788999999999999999999985
No 275
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=24.48 E-value=33 Score=34.42 Aligned_cols=28 Identities=7% Similarity=0.005 Sum_probs=24.3
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 97 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 97 PMLGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp GGGTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3567778999999999999999999984
No 276
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=24.19 E-value=1.1e+02 Score=29.70 Aligned_cols=51 Identities=10% Similarity=-0.089 Sum_probs=43.0
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEec
Q 015647 286 GYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDM 336 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDa 336 (403)
...+++.++++++....++|.+..+-.|.+....+|+++|+++|+.+++=+
T Consensus 245 ~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 245 CVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee
Confidence 456788999988876678888888788888889999999999999988863
No 277
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=24.15 E-value=1.4e+02 Score=26.83 Aligned_cols=66 Identities=12% Similarity=0.153 Sum_probs=44.5
Q ss_pred hhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCC
Q 015647 150 QFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSD 215 (403)
Q Consensus 150 q~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~ 215 (403)
.+..+.+.|.+.+.++..++-|...-...+-.-.|...+|...+.++++......|+.+.||.++.
T Consensus 130 ~~~plvl~Paem~~~~~~~~Nm~~L~~~G~~iipp~~g~ya~p~~iediv~~vv~r~ld~lgi~~~ 195 (209)
T 3zqu_A 130 ERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFYHQPQSVEDLVDFVVARILNTLGIPQD 195 (209)
T ss_dssp HTCCEEEEECCSSCCHHHHHHHHHHHHHTCEECCSCCCCTTCCCSHHHHHHHHHHHHHHHHTCCCS
T ss_pred cCCcEEEEEcccccCHHHHHHHHHHHHCCCEEeCCCcccccCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 345688999999999999988774322222111233334555566777777778889999999863
No 278
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=23.93 E-value=43 Score=35.40 Aligned_cols=28 Identities=21% Similarity=0.287 Sum_probs=24.9
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 106 p~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 106 PFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3567788999999999999999999985
No 279
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=23.75 E-value=1.4e+02 Score=24.35 Aligned_cols=51 Identities=8% Similarity=0.145 Sum_probs=34.2
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCcccc-HHHHHHHHHHcCCEEE-Eeccccccc
Q 015647 290 YEKLEEKAMDYRPKILICGGSSYPREWD-YGRFRQIADKCGAVLM-CDMAHISGL 342 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~D-i~~I~~Iake~Ga~Li-vDaAh~~Gl 342 (403)
..++.++++..+.++|++....-+ .+ ...|..+|+++|++++ ++.-.-+|.
T Consensus 25 ~~~v~kai~~gkakLViiA~D~~~--~~~~~~l~~lc~~~~VP~~~v~sk~eLG~ 77 (121)
T 2lbw_A 25 VKEVVKALRKGEKGLVVIAGDIWP--ADVISHIPVLCEDHSVPYIFIPSKQDLGA 77 (121)
T ss_dssp HHHHHHHHHHSCCCEEEECTTCSC--TTHHHHHHHHHHHTCCCEEECCCHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEeCCCCH--HHHHHHHHHHHHhcCCcEEEECCHHHHHH
Confidence 466777777777888888643322 23 5678899999999974 444444554
No 280
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=23.61 E-value=37 Score=33.46 Aligned_cols=28 Identities=14% Similarity=0.249 Sum_probs=24.4
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 69 ~~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 69 RYLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp TTTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3467788999999999999999999985
No 281
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=23.55 E-value=44 Score=35.35 Aligned_cols=28 Identities=18% Similarity=0.220 Sum_probs=25.0
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.||...|++++.+-||+.|+.||+|.+
T Consensus 110 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 110 PAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4677788999999999999999999985
No 282
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=23.50 E-value=44 Score=35.34 Aligned_cols=28 Identities=11% Similarity=0.183 Sum_probs=24.9
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.||...|++++.+-||+.|+.||+|.+
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3677788999999999999999999985
No 283
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=23.34 E-value=45 Score=34.64 Aligned_cols=27 Identities=30% Similarity=0.358 Sum_probs=24.0
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.+|...|++++.+-||+.|+.||+|.+
T Consensus 194 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 194 RYGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 456677999999999999999999986
No 284
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=23.27 E-value=45 Score=34.48 Aligned_cols=28 Identities=11% Similarity=0.108 Sum_probs=24.4
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.||...|++++.+-||+.|+.||+|.+
T Consensus 217 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 217 PHFGDKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3567778999999999999999999984
No 285
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=22.99 E-value=39 Score=34.80 Aligned_cols=27 Identities=22% Similarity=0.234 Sum_probs=24.2
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.+|...|++++.+-||+.|+.||+|.+
T Consensus 88 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 88 EYGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 467778999999999999999999985
No 286
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=22.80 E-value=46 Score=35.14 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=25.0
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.||...|++++.+-||+.|+.||+|.+
T Consensus 111 p~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 111 PYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3677788999999999999999999985
No 287
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=22.77 E-value=63 Score=30.39 Aligned_cols=51 Identities=10% Similarity=0.142 Sum_probs=31.8
Q ss_pred CCHHHHHHHhc----cCCCcEEEEe-CCCCCc---cccHHHHHHHHHHcCCEEEEeccccc
Q 015647 288 IDYEKLEEKAM----DYRPKILICG-GSSYPR---EWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 288 ID~d~Le~~i~----~~~pklViv~-~s~~g~---~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
.+++++..++. .-+++++++. +++|+. ..|+..|..+.+ .+ .+++|++|+.
T Consensus 129 ~t~~e~~~Av~~i~~~GN~~i~L~~rG~~~~y~~~~~dl~~i~~lk~-~~-pVivD~sH~~ 187 (267)
T 2nwr_A 129 LAPWDTKNVVEKLKFGGAKEIYLTERGTTFGYNNLVVDFRSLPIMKQ-WA-KVIYDATHSV 187 (267)
T ss_dssp CCGGGGHHHHHHHHHTTCSSEEEEECCEECSSSCEECCTTHHHHHTT-TS-EEEEETTGGG
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHH-cC-CEEEcCCccc
Confidence 45555554442 2346776664 333443 258888876644 47 9999999995
No 288
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=22.64 E-value=1.7e+02 Score=31.42 Aligned_cols=62 Identities=15% Similarity=0.187 Sum_probs=46.2
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCC---ccccHHHHHHHHHHcCC----EEEEecc
Q 015647 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYP---REWDYGRFRQIADKCGA----VLMCDMA 337 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g---~~~Di~~I~~Iake~Ga----~LivDaA 337 (403)
..+|+++.+.++ +.++++.+.+.+.++++|.++..... ...-++++.+.+++.|. ++++=++
T Consensus 632 ~aGFEVIDLGvd-----VPpEeIVeAA~EedADVVGLSsLLTt~dihL~~MkevIelLrE~GlrDkIkVIVGGa 700 (763)
T 3kp1_A 632 KYGVEVHYLGTS-----VPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGT 700 (763)
T ss_dssp GGTCEEEECCSS-----BCHHHHHHHHHHTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHTTCTTTSEEEEECT
T ss_pred hCCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEeccccCchhhHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 345888877653 78999999999899999988755554 34567888888888764 6777554
No 289
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=22.61 E-value=1.1e+02 Score=23.95 Aligned_cols=43 Identities=5% Similarity=-0.007 Sum_probs=30.7
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEE
Q 015647 290 YEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMC 334 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~Liv 334 (403)
++++.+.++..+.++|++....-+. -.+.|..+|++++++++.
T Consensus 23 ~~~v~kai~~gka~lViiA~D~~~~--~~~~i~~~c~~~~ip~~~ 65 (101)
T 3on1_A 23 EEQVVKAVQNGQVTLVILSSDAGIH--TKKKLLDKCGSYQIPVKV 65 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEETTSCHH--HHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCcEEEEeCCCCHH--HHHHHHHHHHHcCCCEEE
Confidence 5778888887778888876432221 256788889999988654
No 290
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=22.21 E-value=49 Score=34.33 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=24.7
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.||...|++++.+-||+.|+.||+|.+
T Consensus 82 ~~~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 82 PTYGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3567778999999999999999999985
No 291
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=22.21 E-value=46 Score=34.41 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=24.3
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 214 ~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 214 PQFGDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3567778999999999999999999984
No 292
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=22.15 E-value=42 Score=34.45 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=24.7
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 73 ~~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 73 NEFGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3567778999999999999999999985
No 293
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=21.74 E-value=48 Score=34.58 Aligned_cols=28 Identities=7% Similarity=0.039 Sum_probs=25.0
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 203 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 203 TKYGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3577788999999999999999999985
No 294
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=21.55 E-value=43 Score=35.02 Aligned_cols=28 Identities=4% Similarity=-0.003 Sum_probs=24.9
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||.|.+
T Consensus 280 p~~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 280 RRLGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp GGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 3567778999999999999999999985
No 295
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=21.34 E-value=1e+02 Score=25.27 Aligned_cols=46 Identities=11% Similarity=0.179 Sum_probs=29.2
Q ss_pred CCHHHHHHHhcc----C----CCcEEEEeCCCCCccccHHHHHHHHHHcCCEEE
Q 015647 288 IDYEKLEEKAMD----Y----RPKILICGGSSYPREWDYGRFRQIADKCGAVLM 333 (403)
Q Consensus 288 ID~d~Le~~i~~----~----~pklViv~~s~~g~~~Di~~I~~Iake~Ga~Li 333 (403)
.|++.+.+.+.+ . +-.-|++..+......|++++.++++++|..++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 566666665542 1 223355543333345799999999999998874
No 296
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=20.98 E-value=1.4e+02 Score=28.67 Aligned_cols=50 Identities=8% Similarity=0.050 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEe
Q 015647 286 GYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCD 335 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivD 335 (403)
...+++.++++++....++|.+..+-.|.+....+|+++|+++|+.+++=
T Consensus 241 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 290 (368)
T 1sjd_A 241 SIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCG 290 (368)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeC
Confidence 34678888888876556788887777788888899999999999996654
No 297
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=20.75 E-value=44 Score=34.22 Aligned_cols=27 Identities=15% Similarity=0.182 Sum_probs=23.8
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.+|...|++++.+-||+.|+.||+|.+
T Consensus 74 ~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 74 IFGNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp GGCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 467778899999999999999999985
No 298
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=20.73 E-value=45 Score=34.20 Aligned_cols=27 Identities=15% Similarity=0.270 Sum_probs=23.8
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.+|...|++++++-||+.|+.||+|.+
T Consensus 74 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 74 EFGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 467778899999999999999999985
No 299
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=20.64 E-value=1.4e+02 Score=23.74 Aligned_cols=51 Identities=10% Similarity=-0.024 Sum_probs=33.5
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEE-E-eccccccc
Q 015647 290 YEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLM-C-DMAHISGL 342 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~Li-v-DaAh~~Gl 342 (403)
++++.++++..+.++|++.... + ..=...|..+|++++++++ + +...-+|.
T Consensus 26 ~~~v~kai~~gka~lViiA~D~-~-~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~ 78 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLAGNI-P-KDLEEDVKYYAKLSNIPVYQHKITSLELGA 78 (110)
T ss_dssp HHHHHHHHHTTCCSEEEECTTC-B-HHHHHHHHHHHHHTTCCEEECCSCHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEeCCC-C-HHHHHHHHHHHHHcCCCEEEEcCCHHHHHH
Confidence 5677788887778888876433 2 1225677889999998854 3 44444553
No 300
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=20.41 E-value=1.6e+02 Score=28.61 Aligned_cols=51 Identities=6% Similarity=-0.059 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEec
Q 015647 286 GYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDM 336 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDa 336 (403)
...+..+++++++....++|.+..+-.|.+....+|+++|+++|+.+++=+
T Consensus 253 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 303 (383)
T 3i4k_A 253 SVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGAT 303 (383)
T ss_dssp TCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred ccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 456788888888765578888888788888899999999999999998754
No 301
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.36 E-value=1.4e+02 Score=23.15 Aligned_cols=51 Identities=12% Similarity=-0.029 Sum_probs=34.5
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEE-E-eccccccc
Q 015647 290 YEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLM-C-DMAHISGL 342 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~Li-v-DaAh~~Gl 342 (403)
++++.+.++..+.++|++... .+ ..=.++|..+|++++++++ + +...-+|.
T Consensus 20 ~~~v~kai~~gka~lViiA~D-~~-~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~ 72 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVAKN-AP-KEIKDDIYYYAKLSDIPVYEFEGTSVELGT 72 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEECC-CC-HHHHHHHHHHHHHTTCCEEEECCCSCGGGG
T ss_pred HHHHHHHHHcCCccEEEEeCC-CC-HHHHHHHHHHHHHcCCCEEEeCCCHHHHHH
Confidence 567788888777888887643 22 2235677888999999863 4 44445554
No 302
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=20.20 E-value=57 Score=34.23 Aligned_cols=28 Identities=11% Similarity=0.067 Sum_probs=24.9
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 157 p~~Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 157 PALGTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3567788999999999999999999985
No 303
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=20.17 E-value=49 Score=34.25 Aligned_cols=28 Identities=7% Similarity=0.192 Sum_probs=24.4
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015647 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++.+-||+.|+.||+|.+
T Consensus 213 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 240 (583)
T 1ea9_C 213 PQFGDKDTLKKLVDLCHERGIRVLLDAV 240 (583)
T ss_dssp TTTCCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3567778999999999999999999985
No 304
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=20.03 E-value=39 Score=32.27 Aligned_cols=55 Identities=16% Similarity=0.297 Sum_probs=37.4
Q ss_pred CCC-CCHHHHHHHhcc----CC------CcEEEEe-CCCCCcc---ccHHHHHHHHHHcCCEEEEeccccc
Q 015647 285 TGY-IDYEKLEEKAMD----YR------PKILICG-GSSYPRE---WDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~~----~~------pklViv~-~s~~g~~---~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
+|. .++++++.+++. .+ .++++++ .++|+.. .|+..|..+.+ .+.++++|.+|+.
T Consensus 138 ~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~~~pV~~D~sHs~ 207 (288)
T 3tml_A 138 KGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRE-TNAPVVFDATHSV 207 (288)
T ss_dssp CCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGG-GSSCEEEEHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHh-cCCcEEEcCCccc
Confidence 454 466666554432 12 5687775 4456643 49999988755 9999999999984
Done!