Query 015650
Match_columns 403
No_of_seqs 658 out of 3968
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 16:18:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.3E-43 4.4E-48 314.6 34.8 278 79-403 26-313 (321)
2 1vyh_C Platelet-activating fac 100.0 2.4E-43 8.4E-48 323.7 34.4 278 77-403 100-403 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 1.6E-42 5.5E-47 310.5 38.2 280 77-403 47-335 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 1.5E-42 5.2E-47 305.6 34.6 278 77-402 5-294 (304)
5 2pbi_B Guanine nucleotide-bind 100.0 4.1E-42 1.4E-46 309.3 35.1 282 77-403 56-349 (354)
6 4gqb_B Methylosome protein 50; 100.0 2.7E-42 9.4E-47 308.5 29.9 273 82-403 27-323 (344)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-40 8.9E-45 296.6 34.9 289 79-403 9-327 (345)
8 4g56_B MGC81050 protein; prote 100.0 2.2E-41 7.5E-46 304.8 26.8 275 81-403 38-335 (357)
9 3vu4_A KMHSV2; beta-propeller 100.0 1.4E-39 4.9E-44 292.8 37.2 293 80-403 14-328 (355)
10 3frx_A Guanine nucleotide-bind 100.0 9.5E-40 3.2E-44 289.7 34.3 286 78-403 10-309 (319)
11 3iz6_a 40S ribosomal protein R 100.0 7.7E-41 2.6E-45 304.1 27.1 288 74-403 55-367 (380)
12 4ery_A WD repeat-containing pr 100.0 5.3E-39 1.8E-43 284.2 35.7 280 77-403 15-304 (312)
13 2xzm_R RACK1; ribosome, transl 100.0 4.5E-39 1.5E-43 288.5 34.9 289 78-403 14-332 (343)
14 1erj_A Transcriptional repress 100.0 6.1E-39 2.1E-43 293.0 35.4 272 83-403 62-381 (393)
15 1nr0_A Actin interacting prote 100.0 6.7E-39 2.3E-43 309.1 34.8 255 76-338 50-359 (611)
16 3zwl_B Eukaryotic translation 100.0 1.3E-37 4.5E-42 281.3 37.3 284 70-403 17-338 (369)
17 2ymu_A WD-40 repeat protein; u 100.0 7.1E-38 2.4E-42 300.4 36.1 271 79-403 297-572 (577)
18 2hes_X YDR267CP; beta-propelle 100.0 4.9E-38 1.7E-42 280.1 32.4 280 78-403 7-320 (330)
19 3ow8_A WD repeat-containing pr 100.0 7.5E-38 2.6E-42 277.6 33.0 241 79-333 74-320 (321)
20 4aow_A Guanine nucleotide-bind 100.0 1.1E-37 3.8E-42 278.8 32.3 289 77-403 30-329 (340)
21 1nr0_A Actin interacting prote 100.0 1.2E-37 4.2E-42 300.3 34.9 306 83-403 16-347 (611)
22 1gxr_A ESG1, transducin-like e 100.0 8.9E-37 3.1E-41 272.4 37.6 274 81-403 47-329 (337)
23 4gqb_B Methylosome protein 50; 100.0 1.4E-37 4.7E-42 278.0 30.0 243 82-336 79-333 (344)
24 1vyh_C Platelet-activating fac 100.0 1.1E-37 3.6E-42 286.2 30.0 244 78-333 143-410 (410)
25 4g56_B MGC81050 protein; prote 100.0 1.5E-37 5.2E-42 279.8 25.1 246 81-337 90-346 (357)
26 3i2n_A WD repeat-containing pr 100.0 8.1E-37 2.8E-41 275.0 28.6 298 79-403 12-345 (357)
27 3dm0_A Maltose-binding peripla 100.0 1.2E-36 4.2E-41 297.9 32.0 297 79-403 376-685 (694)
28 3ei3_B DNA damage-binding prot 100.0 2.9E-36 9.9E-41 274.4 32.2 277 78-403 66-374 (383)
29 1sq9_A Antiviral protein SKI8; 100.0 3.1E-36 1.1E-40 275.4 31.4 297 78-403 9-387 (397)
30 1r5m_A SIR4-interacting protei 100.0 4.9E-36 1.7E-40 276.2 32.3 289 84-403 107-417 (425)
31 2ynn_A Coatomer subunit beta'; 100.0 3.5E-36 1.2E-40 265.0 29.8 236 122-403 7-251 (304)
32 1got_B GT-beta; complex (GTP-b 100.0 9.3E-36 3.2E-40 266.5 32.9 240 79-331 91-340 (340)
33 1k8k_C P40, ARP2/3 complex 41 100.0 4.9E-36 1.7E-40 271.5 30.1 305 81-403 4-353 (372)
34 2ymu_A WD-40 repeat protein; u 100.0 2.1E-35 7.1E-40 283.3 36.0 271 79-403 256-531 (577)
35 2pm7_B Protein transport prote 100.0 7.8E-36 2.7E-40 261.9 30.3 248 80-335 4-286 (297)
36 3k26_A Polycomb protein EED; W 100.0 3.7E-36 1.3E-40 271.6 26.4 281 79-403 12-358 (366)
37 2pm9_A Protein WEB1, protein t 100.0 1.4E-36 4.7E-41 279.5 23.0 308 82-403 64-406 (416)
38 3frx_A Guanine nucleotide-bind 100.0 6.9E-35 2.4E-39 258.4 32.2 243 79-335 59-318 (319)
39 1r5m_A SIR4-interacting protei 100.0 4.2E-35 1.4E-39 270.0 31.7 274 81-403 41-353 (425)
40 3mmy_A MRNA export factor; mRN 100.0 8.7E-35 3E-39 262.6 32.5 277 76-402 30-337 (368)
41 1erj_A Transcriptional repress 100.0 1.6E-34 5.3E-39 263.8 34.0 239 84-336 122-391 (393)
42 3odt_A Protein DOA1; ubiquitin 100.0 2.9E-34 1E-38 253.5 33.9 271 77-403 10-288 (313)
43 3dw8_B Serine/threonine-protei 100.0 2.6E-35 8.9E-40 273.6 27.8 307 82-402 25-438 (447)
44 4h5i_A Guanine nucleotide-exch 100.0 1.2E-34 4.3E-39 261.5 30.9 269 86-403 15-335 (365)
45 3bg1_A Protein SEC13 homolog; 100.0 1.2E-35 4.2E-40 262.9 23.6 247 79-335 7-294 (316)
46 3gre_A Serine/threonine-protei 100.0 2.2E-35 7.6E-40 273.4 26.0 310 80-403 58-432 (437)
47 1yfq_A Cell cycle arrest prote 100.0 2.1E-35 7.1E-40 264.3 24.9 273 80-403 6-315 (342)
48 3mkq_A Coatomer beta'-subunit; 100.0 1.9E-34 6.6E-39 287.6 34.0 249 78-340 6-265 (814)
49 4e54_B DNA damage-binding prot 100.0 1.4E-35 4.9E-40 274.4 23.4 277 80-402 114-421 (435)
50 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.2E-34 1.4E-38 256.2 32.1 249 80-338 56-339 (345)
51 4gga_A P55CDC, cell division c 100.0 5.5E-34 1.9E-38 262.6 33.6 267 88-403 108-387 (420)
52 2hes_X YDR267CP; beta-propelle 100.0 2E-34 6.9E-39 256.7 29.2 242 83-334 56-328 (330)
53 3vl1_A 26S proteasome regulato 100.0 3.2E-34 1.1E-38 264.1 31.4 277 86-402 98-410 (420)
54 2j04_B YDR362CP, TAU91; beta p 100.0 2.1E-35 7.2E-40 276.9 23.8 308 84-403 132-509 (524)
55 2pbi_B Guanine nucleotide-bind 100.0 5.9E-34 2E-38 256.1 30.9 241 79-331 100-354 (354)
56 4aez_A CDC20, WD repeat-contai 100.0 3.5E-33 1.2E-37 255.6 36.6 273 83-403 89-372 (401)
57 3vl1_A 26S proteasome regulato 100.0 7.4E-35 2.5E-39 268.4 24.7 268 87-403 58-357 (420)
58 2pm7_B Protein transport prote 100.0 4E-34 1.4E-38 250.9 27.9 236 127-403 7-277 (297)
59 2pm9_A Protein WEB1, protein t 100.0 1.8E-35 6E-40 272.1 20.1 273 84-403 11-329 (416)
60 3f3f_A Nucleoporin SEH1; struc 100.0 9E-34 3.1E-38 253.8 30.2 248 78-337 4-340 (351)
61 3jrp_A Fusion protein of prote 100.0 1.3E-33 4.4E-38 256.1 31.1 248 79-336 5-289 (379)
62 3dwl_C Actin-related protein 2 100.0 1.1E-35 3.9E-40 269.8 17.5 240 81-334 7-281 (377)
63 4aez_A CDC20, WD repeat-contai 100.0 1.5E-33 5.1E-38 258.1 31.7 247 82-339 131-385 (401)
64 1gxr_A ESG1, transducin-like e 100.0 8.2E-33 2.8E-37 246.7 34.7 237 83-333 95-336 (337)
65 4ggc_A P55CDC, cell division c 100.0 8.3E-33 2.8E-37 244.8 33.9 267 88-403 28-307 (318)
66 2xzm_R RACK1; ribosome, transl 100.0 3.2E-33 1.1E-37 250.4 30.5 244 79-336 70-342 (343)
67 4gga_A P55CDC, cell division c 100.0 1.3E-32 4.6E-37 253.3 35.1 247 81-340 143-401 (420)
68 4a11_B DNA excision repair pro 100.0 2.2E-33 7.6E-38 257.1 29.5 283 78-403 36-357 (408)
69 3sfz_A APAF-1, apoptotic pepti 100.0 4.4E-33 1.5E-37 289.8 35.1 277 78-403 608-905 (1249)
70 3v7d_B Cell division control p 100.0 3.5E-32 1.2E-36 253.8 36.6 267 78-402 114-412 (464)
71 3bg1_A Protein SEC13 homolog; 100.0 2.8E-34 9.7E-39 254.2 21.2 237 127-403 11-285 (316)
72 3iz6_a 40S ribosomal protein R 100.0 5.2E-34 1.8E-38 259.1 23.4 249 78-336 101-377 (380)
73 4ery_A WD repeat-containing pr 100.0 1.1E-32 3.7E-37 243.7 30.3 242 78-333 58-311 (312)
74 4h5i_A Guanine nucleotide-exch 100.0 2.8E-33 9.5E-38 252.6 26.4 245 80-336 68-345 (365)
75 1pgu_A Actin interacting prote 100.0 1.3E-32 4.4E-37 265.7 30.9 272 82-403 15-320 (615)
76 1p22_A F-BOX/WD-repeat protein 100.0 5.6E-32 1.9E-36 250.3 33.9 271 81-403 129-406 (435)
77 1pgu_A Actin interacting prote 100.0 3.2E-32 1.1E-36 262.9 31.7 277 79-403 197-606 (615)
78 2oaj_A Protein SNI1; WD40 repe 100.0 5.2E-32 1.8E-36 270.6 33.9 239 80-332 12-310 (902)
79 1sq9_A Antiviral protein SKI8; 100.0 2.1E-32 7.1E-37 250.0 28.2 248 78-336 55-397 (397)
80 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.4E-31 1.2E-35 245.8 36.6 268 77-403 151-430 (445)
81 3k26_A Polycomb protein EED; W 100.0 1E-32 3.5E-37 249.0 25.5 238 83-334 67-366 (366)
82 3sfz_A APAF-1, apoptotic pepti 100.0 3.6E-32 1.2E-36 282.9 32.4 310 78-403 650-1108(1249)
83 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.6E-31 8.8E-36 247.0 33.9 272 86-400 5-374 (450)
84 4ggc_A P55CDC, cell division c 100.0 5.8E-31 2E-35 232.9 34.4 244 80-336 62-317 (318)
85 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-31 4.9E-36 267.4 31.9 310 84-403 97-597 (902)
86 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.5E-30 5.2E-35 241.5 35.9 264 79-403 112-383 (445)
87 3dm0_A Maltose-binding peripla 100.0 1.7E-31 5.9E-36 261.4 30.4 243 79-334 424-693 (694)
88 3v7d_B Cell division control p 100.0 1.1E-30 3.7E-35 243.8 32.8 240 77-337 154-424 (464)
89 4aow_A Guanine nucleotide-bind 100.0 1.2E-30 4.1E-35 233.1 31.6 246 78-336 79-339 (340)
90 3mkq_A Coatomer beta'-subunit; 100.0 5.8E-31 2E-35 262.4 32.7 249 77-338 47-306 (814)
91 3ei3_B DNA damage-binding prot 100.0 4E-31 1.4E-35 240.5 28.5 238 82-334 115-382 (383)
92 3zwl_B Eukaryotic translation 100.0 2.1E-30 7.2E-35 233.9 33.0 252 76-337 65-349 (369)
93 1k8k_C P40, ARP2/3 complex 41 100.0 3.7E-31 1.3E-35 239.4 26.6 248 78-337 45-364 (372)
94 3dwl_C Actin-related protein 2 100.0 1.2E-32 4E-37 250.0 16.7 232 128-402 10-273 (377)
95 3jrp_A Fusion protein of prote 100.0 4.5E-31 1.5E-35 239.3 26.8 240 122-403 5-279 (379)
96 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-31 6.2E-36 244.4 24.3 267 87-398 36-331 (402)
97 3i2n_A WD repeat-containing pr 100.0 4.3E-31 1.5E-35 237.5 25.7 240 82-336 62-355 (357)
98 3jro_A Fusion protein of prote 100.0 2.2E-31 7.6E-36 262.3 24.3 249 79-337 3-288 (753)
99 2j04_A TAU60, YPL007P, hypothe 100.0 1E-31 3.5E-36 246.5 20.0 252 82-403 12-290 (588)
100 2aq5_A Coronin-1A; WD40 repeat 100.0 6.2E-31 2.1E-35 240.8 25.4 249 78-337 74-345 (402)
101 3bws_A Protein LP49; two-domai 100.0 9E-30 3.1E-34 235.3 33.2 270 86-402 123-423 (433)
102 2xyi_A Probable histone-bindin 100.0 1E-30 3.5E-35 241.4 26.1 247 79-336 122-412 (430)
103 2xyi_A Probable histone-bindin 100.0 2.4E-30 8.2E-35 238.9 28.2 246 127-403 126-402 (430)
104 3lrv_A PRE-mRNA-splicing facto 100.0 1.3E-30 4.3E-35 233.6 23.8 227 92-336 43-294 (343)
105 2j04_B YDR362CP, TAU91; beta p 100.0 6.7E-31 2.3E-35 246.4 22.8 242 81-335 203-518 (524)
106 3odt_A Protein DOA1; ubiquitin 100.0 1.6E-29 5.6E-34 223.0 28.8 241 78-339 52-301 (313)
107 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-29 4.5E-34 226.6 27.7 266 127-403 9-329 (351)
108 3gre_A Serine/threonine-protei 100.0 1.2E-29 4.2E-34 234.8 27.7 241 83-331 109-437 (437)
109 4gq1_A NUP37; propeller, trans 100.0 3.3E-30 1.1E-34 235.0 21.9 258 82-402 86-381 (393)
110 1l0q_A Surface layer protein; 100.0 4.9E-28 1.7E-32 220.6 35.0 253 98-402 3-266 (391)
111 2w18_A PALB2, fancn, partner a 100.0 4.3E-28 1.5E-32 209.3 31.5 242 87-333 41-356 (356)
112 4e54_B DNA damage-binding prot 100.0 5.3E-30 1.8E-34 237.0 20.5 246 79-337 158-433 (435)
113 3jro_A Fusion protein of prote 100.0 1.5E-29 5.3E-34 249.1 24.3 236 127-403 7-277 (753)
114 2j04_A TAU60, YPL007P, hypothe 100.0 4E-31 1.4E-35 242.6 11.5 222 82-333 49-296 (588)
115 3dw8_B Serine/threonine-protei 100.0 3.6E-29 1.2E-33 232.2 23.8 240 128-403 27-365 (447)
116 1p22_A F-BOX/WD-repeat protein 100.0 1.5E-28 5.3E-33 227.3 26.9 235 77-337 165-417 (435)
117 3mmy_A MRNA export factor; mRN 100.0 2E-28 6.8E-33 220.9 27.0 245 79-336 80-348 (368)
118 1yfq_A Cell cycle arrest prote 100.0 1.9E-28 6.4E-33 219.1 24.5 234 126-403 8-274 (342)
119 1l0q_A Surface layer protein; 100.0 4.2E-27 1.4E-31 214.4 33.5 241 86-342 32-283 (391)
120 4a11_B DNA excision repair pro 100.0 1.8E-27 6.2E-32 217.8 28.3 245 82-341 96-372 (408)
121 3bws_A Protein LP49; two-domai 100.0 8.8E-27 3E-31 215.3 32.6 240 80-334 164-432 (433)
122 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.8E-26 6E-31 214.4 29.8 242 81-336 98-393 (450)
123 3vu4_A KMHSV2; beta-propeller 100.0 7.2E-27 2.5E-31 210.0 24.6 234 110-403 3-263 (355)
124 2w18_A PALB2, fancn, partner a 100.0 5.4E-26 1.9E-30 196.3 28.7 228 131-403 41-349 (356)
125 3lrv_A PRE-mRNA-splicing facto 100.0 4.9E-27 1.7E-31 210.2 22.9 221 136-402 43-283 (343)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.1E-26 3.8E-31 213.0 25.3 272 86-402 63-375 (415)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 9.5E-26 3.2E-30 206.8 22.0 263 81-393 113-410 (415)
128 3vgz_A Uncharacterized protein 99.9 6.8E-24 2.3E-28 190.3 33.6 266 84-402 39-335 (353)
129 1nir_A Nitrite reductase; hemo 99.9 2.2E-24 7.4E-29 203.8 30.8 266 92-399 144-439 (543)
130 2ecf_A Dipeptidyl peptidase IV 99.9 2.3E-24 7.7E-29 212.7 26.1 237 85-334 36-367 (741)
131 1nir_A Nitrite reductase; hemo 99.9 3.8E-23 1.3E-27 195.3 30.7 270 88-399 181-497 (543)
132 4gq1_A NUP37; propeller, trans 99.9 2.2E-24 7.4E-29 196.5 21.3 227 79-334 130-389 (393)
133 2ojh_A Uncharacterized protein 99.9 1.1E-23 3.7E-28 183.8 24.6 248 105-402 21-293 (297)
134 3u4y_A Uncharacterized protein 99.9 2.6E-22 8.9E-27 178.4 31.5 229 92-336 4-254 (331)
135 3o4h_A Acylamino-acid-releasin 99.9 1.4E-23 4.8E-28 201.3 23.4 231 85-332 21-274 (582)
136 1ri6_A Putative isomerase YBHE 99.9 3.1E-22 1.1E-26 178.6 29.7 240 83-335 35-309 (343)
137 2z3z_A Dipeptidyl aminopeptida 99.9 5.7E-23 1.9E-27 201.6 24.0 235 88-333 28-341 (706)
138 1pby_B Quinohemoprotein amine 99.9 2.1E-22 7.2E-27 179.2 25.2 252 98-402 2-301 (337)
139 1xfd_A DIP, dipeptidyl aminope 99.9 1E-23 3.6E-28 207.4 18.3 239 87-331 18-341 (723)
140 2ecf_A Dipeptidyl peptidase IV 99.9 1.1E-22 3.8E-27 200.7 24.5 265 87-400 110-444 (741)
141 1ri6_A Putative isomerase YBHE 99.9 2.8E-21 9.7E-26 172.3 30.9 258 100-400 8-296 (343)
142 3u4y_A Uncharacterized protein 99.9 7.2E-22 2.4E-26 175.6 26.8 242 84-336 39-306 (331)
143 1k32_A Tricorn protease; prote 99.9 1E-22 3.5E-27 207.8 23.8 267 81-402 199-493 (1045)
144 2z3z_A Dipeptidyl aminopeptida 99.9 1.9E-22 6.4E-27 197.9 24.5 266 85-401 81-421 (706)
145 1pby_B Quinohemoprotein amine 99.9 4.6E-22 1.6E-26 177.0 23.9 236 87-337 35-313 (337)
146 1xfd_A DIP, dipeptidyl aminope 99.9 2.5E-22 8.6E-27 197.6 21.7 240 87-336 62-395 (723)
147 3pe7_A Oligogalacturonate lyas 99.9 4.8E-22 1.6E-26 180.7 22.0 276 79-400 24-370 (388)
148 3hfq_A Uncharacterized protein 99.9 1.5E-20 5.2E-25 168.2 31.3 254 105-401 15-306 (347)
149 2ojh_A Uncharacterized protein 99.9 7.9E-22 2.7E-26 171.9 22.2 239 80-325 36-293 (297)
150 1k32_A Tricorn protease; prote 99.9 2.5E-21 8.4E-26 197.6 27.0 267 84-402 294-629 (1045)
151 3hfq_A Uncharacterized protein 99.9 8.8E-21 3E-25 169.8 26.4 241 84-335 38-318 (347)
152 3scy_A Hypothetical bacterial 99.9 9E-20 3.1E-24 164.1 30.2 239 84-335 48-338 (361)
153 3vgz_A Uncharacterized protein 99.9 5.2E-20 1.8E-24 164.9 27.4 205 130-336 41-264 (353)
154 1jmx_B Amine dehydrogenase; ox 99.9 3.3E-20 1.1E-24 165.9 25.8 228 90-337 4-328 (349)
155 1jmx_B Amine dehydrogenase; ox 99.9 1.8E-19 6.2E-24 161.0 26.1 221 135-402 5-316 (349)
156 3scy_A Hypothetical bacterial 99.9 8.9E-19 3E-23 157.6 30.3 265 96-401 12-326 (361)
157 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.6E-19 8.8E-24 161.4 25.7 241 85-335 39-342 (365)
158 1z68_A Fibroblast activation p 99.8 2.4E-21 8.2E-26 190.4 11.6 237 90-336 20-348 (719)
159 3o4h_A Acylamino-acid-releasin 99.8 3.5E-20 1.2E-24 177.7 18.3 194 128-337 20-230 (582)
160 3c5m_A Oligogalacturonate lyas 99.8 1.3E-19 4.6E-24 164.9 18.9 233 88-336 38-331 (396)
161 1jof_A Carboxy-CIS,CIS-muconat 99.8 8E-18 2.7E-22 151.6 29.7 254 106-401 14-330 (365)
162 2oit_A Nucleoporin 214KDA; NH2 99.8 5.3E-19 1.8E-23 162.5 21.8 196 131-336 38-280 (434)
163 4a5s_A Dipeptidyl peptidase 4 99.8 2.1E-19 7E-24 177.0 19.8 245 87-336 18-355 (740)
164 2oit_A Nucleoporin 214KDA; NH2 99.8 2E-18 6.7E-23 158.8 23.9 239 85-333 36-332 (434)
165 1q7f_A NHL, brain tumor CG1071 99.8 5.9E-17 2E-21 140.7 32.0 239 82-336 26-282 (286)
166 3fvz_A Peptidyl-glycine alpha- 99.8 1.5E-16 5.1E-21 141.1 29.2 241 85-336 23-324 (329)
167 3pe7_A Oligogalacturonate lyas 99.8 1.9E-17 6.3E-22 150.4 22.8 245 81-336 76-384 (388)
168 2oiz_A Aromatic amine dehydrog 99.8 1.7E-17 5.8E-22 148.9 22.0 230 90-335 54-335 (361)
169 2gop_A Trilobed protease; beta 99.8 2.1E-16 7E-21 141.2 28.1 224 86-335 15-292 (347)
170 1z68_A Fibroblast activation p 99.8 2E-18 6.8E-23 169.7 15.2 189 134-336 20-293 (719)
171 4a5s_A Dipeptidyl peptidase 4 99.8 2.8E-17 9.6E-22 161.8 19.9 193 131-336 18-296 (740)
172 3azo_A Aminopeptidase; POP fam 99.8 7.5E-17 2.6E-21 157.0 22.7 243 78-334 16-323 (662)
173 2dg1_A DRP35, lactonase; beta 99.8 6.2E-16 2.1E-20 137.3 25.5 268 86-402 6-301 (333)
174 3dsm_A Uncharacterized protein 99.7 8.5E-15 2.9E-19 129.6 30.4 218 105-337 16-256 (328)
175 2xdw_A Prolyl endopeptidase; a 99.7 2.1E-15 7.1E-20 147.8 26.6 247 83-336 122-416 (710)
176 3fvz_A Peptidyl-glycine alpha- 99.7 2E-15 6.8E-20 133.8 23.8 238 130-402 24-313 (329)
177 1q7f_A NHL, brain tumor CG1071 99.7 1.6E-14 5.4E-19 125.3 28.3 193 128-332 28-236 (286)
178 1qks_A Cytochrome CD1 nitrite 99.7 4.4E-14 1.5E-18 133.2 32.5 229 95-336 165-423 (567)
179 3e5z_A Putative gluconolactona 99.7 4.3E-14 1.5E-18 123.2 29.8 234 80-336 22-288 (296)
180 3c5m_A Oligogalacturonate lyas 99.7 1.3E-14 4.6E-19 131.7 27.0 231 90-335 85-383 (396)
181 2oiz_A Aromatic amine dehydrog 99.7 2E-15 6.7E-20 135.5 21.0 252 96-400 14-324 (361)
182 3azo_A Aminopeptidase; POP fam 99.7 1.2E-15 3.9E-20 148.6 21.0 199 127-333 21-271 (662)
183 3e5z_A Putative gluconolactona 99.7 1.4E-14 5E-19 126.2 25.6 224 128-402 26-278 (296)
184 2xdw_A Prolyl endopeptidase; a 99.7 1.4E-14 5E-19 141.8 26.8 240 95-336 81-370 (710)
185 2gop_A Trilobed protease; beta 99.7 2E-14 6.8E-19 128.3 24.9 226 86-333 59-330 (347)
186 2z2n_A Virginiamycin B lyase; 99.7 9.5E-13 3.3E-17 114.5 34.6 232 83-332 12-253 (299)
187 1rwi_B Serine/threonine-protei 99.7 3.3E-14 1.1E-18 122.1 24.5 235 87-337 25-267 (270)
188 3dsm_A Uncharacterized protein 99.7 6.7E-14 2.3E-18 123.8 26.4 234 86-336 44-303 (328)
189 2bkl_A Prolyl endopeptidase; m 99.7 2.1E-14 7E-19 140.4 24.5 232 94-334 76-349 (695)
190 2dg1_A DRP35, lactonase; beta 99.6 6.7E-13 2.3E-17 117.7 31.0 245 81-334 40-314 (333)
191 3no2_A Uncharacterized protein 99.6 6.4E-14 2.2E-18 120.4 23.1 186 141-339 5-200 (276)
192 2bkl_A Prolyl endopeptidase; m 99.6 4.2E-15 1.4E-19 145.2 17.7 246 82-336 117-399 (695)
193 3g4e_A Regucalcin; six bladed 99.6 1.4E-12 4.7E-17 113.7 29.3 229 130-401 13-262 (297)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.4E-12 4.8E-17 114.5 29.1 238 84-336 16-301 (314)
195 3no2_A Uncharacterized protein 99.6 2.3E-12 7.7E-17 110.8 27.7 211 96-322 4-231 (276)
196 2mad_H Methylamine dehydrogena 99.6 3.1E-12 1.1E-16 114.8 29.2 233 90-339 70-355 (373)
197 2qc5_A Streptogramin B lactona 99.6 3E-11 1E-15 105.0 34.9 231 84-332 18-258 (300)
198 1yr2_A Prolyl oligopeptidase; 99.6 1.2E-13 4.1E-18 135.9 21.8 244 84-336 161-443 (741)
199 1qks_A Cytochrome CD1 nitrite 99.6 4.7E-12 1.6E-16 119.4 31.6 233 87-335 198-478 (567)
200 3hrp_A Uncharacterized protein 99.6 4.7E-12 1.6E-16 115.2 29.6 236 85-333 130-409 (409)
201 2mad_H Methylamine dehydrogena 99.6 2.3E-11 7.9E-16 109.1 31.7 251 94-399 29-337 (373)
202 2ghs_A AGR_C_1268P; regucalcin 99.6 1.3E-11 4.3E-16 109.0 29.5 223 133-401 52-292 (326)
203 1yr2_A Prolyl oligopeptidase; 99.6 1.1E-12 3.9E-17 129.0 25.1 235 94-333 115-392 (741)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 4.2E-12 1.4E-16 111.4 25.5 227 131-401 19-288 (314)
205 3g4e_A Regucalcin; six bladed 99.5 1.3E-11 4.6E-16 107.4 27.8 222 84-323 11-261 (297)
206 3iuj_A Prolyl endopeptidase; h 99.5 9.7E-13 3.3E-17 128.3 22.6 244 82-336 125-407 (693)
207 3sjl_D Methylamine dehydrogena 99.5 3.5E-12 1.2E-16 113.1 23.9 232 90-337 82-366 (386)
208 1rwi_B Serine/threonine-protei 99.5 2.5E-12 8.5E-17 110.3 21.4 225 131-402 25-255 (270)
209 2z2n_A Virginiamycin B lyase; 99.5 1.1E-10 3.9E-15 101.3 32.0 233 85-336 56-297 (299)
210 3c75_H MADH, methylamine dehyd 99.5 3.9E-12 1.3E-16 114.9 20.7 215 106-337 99-405 (426)
211 3dr2_A Exported gluconolactona 99.4 6.2E-11 2.1E-15 103.6 25.3 224 82-325 41-298 (305)
212 2ghs_A AGR_C_1268P; regucalcin 99.4 2.7E-10 9.1E-15 100.5 29.6 217 87-324 50-292 (326)
213 3sjl_D Methylamine dehydrogena 99.4 1.4E-11 4.7E-16 109.4 21.0 255 92-400 39-351 (386)
214 3hrp_A Uncharacterized protein 99.4 1.2E-10 4E-15 106.0 27.8 195 130-336 131-356 (409)
215 1xip_A Nucleoporin NUP159; bet 99.4 6.8E-12 2.3E-16 111.8 15.1 167 87-275 39-230 (388)
216 1xip_A Nucleoporin NUP159; bet 99.4 1.8E-11 6.2E-16 109.0 17.1 172 131-322 39-232 (388)
217 2qc5_A Streptogramin B lactona 99.4 1.8E-09 6E-14 93.7 29.0 230 85-333 61-299 (300)
218 3dr2_A Exported gluconolactona 99.4 4.5E-10 1.5E-14 98.1 25.0 222 130-402 45-298 (305)
219 2ece_A 462AA long hypothetical 99.4 1.4E-09 4.7E-14 97.3 28.0 228 95-322 93-399 (462)
220 2ece_A 462AA long hypothetical 99.3 4E-09 1.4E-13 94.3 30.2 189 141-335 96-353 (462)
221 2qe8_A Uncharacterized protein 99.3 6.3E-10 2.1E-14 98.9 25.4 233 86-330 17-317 (343)
222 3iuj_A Prolyl endopeptidase; h 99.3 1.2E-10 4.2E-15 113.5 20.9 197 127-335 126-360 (693)
223 2qe8_A Uncharacterized protein 99.3 8.2E-10 2.8E-14 98.1 23.8 198 130-336 17-280 (343)
224 1yiq_A Quinohemoprotein alcoho 99.3 2.3E-09 8E-14 104.0 27.7 231 97-337 121-508 (689)
225 1mda_H Methylamine dehydrogena 99.3 9.9E-11 3.4E-15 104.0 16.0 212 107-339 47-351 (368)
226 2iwa_A Glutamine cyclotransfer 99.3 1.5E-09 5.2E-14 91.2 22.3 165 166-337 9-184 (266)
227 1npe_A Nidogen, entactin; glyc 99.3 1.9E-08 6.4E-13 85.9 29.7 228 97-336 1-240 (267)
228 2iwa_A Glutamine cyclotransfer 99.3 2.9E-08 1E-12 83.4 28.6 195 130-336 21-239 (266)
229 1kb0_A Quinohemoprotein alcoho 99.2 8.3E-09 2.8E-13 99.9 26.4 231 97-337 128-510 (677)
230 3nol_A Glutamine cyclotransfer 99.2 6.7E-09 2.3E-13 86.2 20.3 202 167-400 32-244 (262)
231 1fwx_A Nitrous oxide reductase 99.2 1.9E-09 6.4E-14 99.8 18.8 236 95-336 99-433 (595)
232 1kb0_A Quinohemoprotein alcoho 99.2 4.8E-08 1.6E-12 94.6 28.9 194 96-298 77-354 (677)
233 3nok_A Glutaminyl cyclase; bet 99.1 1.3E-08 4.3E-13 84.5 20.8 202 167-399 44-253 (268)
234 3c75_H MADH, methylamine dehyd 99.1 2.2E-08 7.6E-13 90.4 24.0 170 156-334 99-295 (426)
235 3q7m_A Lipoprotein YFGL, BAMB; 99.1 9.2E-08 3.1E-12 86.0 28.0 219 96-337 103-340 (376)
236 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.3E-07 4.4E-12 85.0 28.9 222 97-338 53-300 (376)
237 1fwx_A Nitrous oxide reductase 99.1 1.7E-08 5.9E-13 93.4 22.6 184 140-334 100-361 (595)
238 1mda_H Methylamine dehydrogena 99.1 4.7E-09 1.6E-13 93.2 17.8 89 157-248 47-158 (368)
239 3nol_A Glutamine cyclotransfer 99.1 4.7E-08 1.6E-12 81.1 22.5 190 122-323 35-244 (262)
240 1yiq_A Quinohemoprotein alcoho 99.1 1.3E-07 4.5E-12 91.7 28.9 192 96-298 70-346 (689)
241 1npe_A Nidogen, entactin; glyc 99.1 4.9E-07 1.7E-11 77.0 29.3 216 86-316 36-263 (267)
242 2fp8_A Strictosidine synthase; 99.1 4.2E-07 1.4E-11 79.8 28.5 236 87-336 20-315 (322)
243 3nok_A Glutaminyl cyclase; bet 99.1 3.8E-07 1.3E-11 75.7 26.0 186 122-322 47-253 (268)
244 2hz6_A Endoplasmic reticulum t 99.0 2.9E-10 9.8E-15 102.0 7.3 183 96-298 8-200 (369)
245 2hz6_A Endoplasmic reticulum t 99.0 6.4E-11 2.2E-15 106.3 2.7 167 156-336 19-194 (369)
246 3hxj_A Pyrrolo-quinoline quino 99.0 4.1E-08 1.4E-12 86.4 20.7 219 96-337 107-327 (330)
247 3mbr_X Glutamine cyclotransfer 99.0 5.9E-07 2E-11 73.9 25.6 189 122-322 13-222 (243)
248 3hxj_A Pyrrolo-quinoline quino 99.0 1.3E-08 4.5E-13 89.6 17.0 214 91-331 25-241 (330)
249 4a2l_A BT_4663, two-component 99.0 1.5E-06 5.2E-11 86.1 33.3 234 88-336 175-438 (795)
250 3mbr_X Glutamine cyclotransfer 99.0 4.5E-07 1.5E-11 74.6 23.0 204 167-400 10-223 (243)
251 2ad6_A Methanol dehydrogenase 98.9 3.1E-07 1.1E-11 87.0 24.6 230 97-337 115-497 (571)
252 2p4o_A Hypothetical protein; p 98.9 5.6E-06 1.9E-10 72.0 29.0 226 86-325 32-279 (306)
253 4a2l_A BT_4663, two-component 98.9 9.8E-06 3.4E-10 80.3 34.0 236 85-336 262-528 (795)
254 1kv9_A Type II quinohemoprotei 98.9 7.1E-07 2.4E-11 86.3 25.0 236 97-337 117-491 (668)
255 1ijq_A LDL receptor, low-densi 98.8 2.8E-05 9.5E-10 67.9 31.2 230 98-340 2-244 (316)
256 2p4o_A Hypothetical protein; p 98.8 1.2E-05 4E-10 69.9 28.7 223 130-401 32-278 (306)
257 3v65_B Low-density lipoprotein 98.8 2.2E-05 7.5E-10 70.6 30.7 238 87-339 78-323 (386)
258 3v64_C Agrin; beta propeller, 98.8 2.8E-05 9.6E-10 68.8 30.7 239 86-339 34-280 (349)
259 3p5b_L Low density lipoprotein 98.8 4E-05 1.4E-09 69.2 31.5 231 98-340 84-326 (400)
260 1kv9_A Type II quinohemoprotei 98.8 6.6E-06 2.2E-10 79.6 27.4 191 96-298 66-341 (668)
261 1w6s_A Methanol dehydrogenase 98.8 6.6E-06 2.2E-10 78.0 26.5 227 100-337 124-506 (599)
262 2ad6_A Methanol dehydrogenase 98.7 1.1E-05 3.9E-10 76.3 27.0 194 96-299 62-344 (571)
263 2xzh_A Clathrin heavy chain 1; 98.7 9.8E-05 3.3E-09 62.8 29.9 229 92-336 73-334 (365)
264 2xzh_A Clathrin heavy chain 1; 98.7 0.0001 3.5E-09 62.7 30.4 217 108-337 51-293 (365)
265 3v9f_A Two-component system se 98.7 4.7E-05 1.6E-09 75.3 30.9 237 84-336 311-570 (781)
266 1flg_A Protein (quinoprotein e 98.7 1.4E-05 4.7E-10 75.8 25.9 140 194-337 291-519 (582)
267 3sov_A LRP-6, low-density lipo 98.7 5.3E-05 1.8E-09 66.0 27.5 230 99-340 6-244 (318)
268 1ijq_A LDL receptor, low-densi 98.6 0.00022 7.5E-09 62.1 30.5 174 156-334 10-195 (316)
269 3v9f_A Two-component system se 98.6 0.00012 4E-09 72.5 31.3 235 85-336 210-480 (781)
270 3qqz_A Putative uncharacterize 98.6 0.00012 4E-09 61.1 26.2 197 80-288 21-251 (255)
271 2fp8_A Strictosidine synthase; 98.6 4.7E-05 1.6E-09 66.6 25.3 180 132-323 21-248 (322)
272 3m0c_C LDL receptor, low-densi 98.6 0.00015 5E-09 71.1 30.7 230 98-339 396-637 (791)
273 3v65_B Low-density lipoprotein 98.6 0.00011 3.6E-09 66.1 27.8 174 156-334 96-277 (386)
274 3v64_C Agrin; beta propeller, 98.6 0.00022 7.5E-09 63.1 29.1 174 156-334 53-234 (349)
275 1bpo_A Protein (clathrin); cla 98.6 0.00035 1.2E-08 61.9 29.8 230 91-336 71-333 (494)
276 1k3i_A Galactose oxidase precu 98.6 4.5E-06 1.6E-10 80.7 19.3 239 90-336 190-499 (656)
277 1flg_A Protein (quinoprotein e 98.5 0.00021 7E-09 67.8 29.9 195 96-299 68-364 (582)
278 3amr_A 3-phytase; beta-propell 98.5 5.7E-05 1.9E-09 65.5 23.1 172 156-333 50-262 (355)
279 4hw6_A Hypothetical protein, I 98.5 0.00011 3.8E-09 67.0 26.6 238 86-333 139-432 (433)
280 3qqz_A Putative uncharacterize 98.5 0.00032 1.1E-08 58.4 28.4 198 122-331 20-250 (255)
281 1w6s_A Methanol dehydrogenase 98.5 0.0002 6.9E-09 67.9 28.3 194 96-298 62-350 (599)
282 1bpo_A Protein (clathrin); cla 98.5 0.00054 1.8E-08 60.7 32.1 218 107-337 49-292 (494)
283 3tc9_A Hypothetical hydrolase; 98.5 0.00017 5.7E-09 65.8 26.2 237 87-333 138-429 (430)
284 2xe4_A Oligopeptidase B; hydro 98.5 2E-05 6.8E-10 77.4 21.3 241 87-336 175-460 (751)
285 3p5b_L Low density lipoprotein 98.5 0.0007 2.4E-08 61.0 29.8 206 84-299 110-329 (400)
286 4a0p_A LRP6, LRP-6, low-densit 98.4 0.00079 2.7E-08 64.3 31.3 228 98-338 7-241 (628)
287 3tc9_A Hypothetical hydrolase; 98.4 0.00045 1.5E-08 62.9 27.2 148 132-289 139-300 (430)
288 3kya_A Putative phosphatase; s 98.4 0.00054 1.9E-08 62.8 27.0 246 87-337 140-478 (496)
289 1k3i_A Galactose oxidase precu 98.3 0.00021 7.2E-09 69.1 22.9 231 88-323 245-530 (656)
290 3m0c_C LDL receptor, low-densi 98.3 0.002 6.8E-08 63.1 29.6 175 156-335 404-590 (791)
291 2xe4_A Oligopeptidase B; hydro 98.2 6.7E-05 2.3E-09 73.7 19.0 198 131-333 175-397 (751)
292 4hw6_A Hypothetical protein, I 98.2 0.0012 3.9E-08 60.2 25.6 191 132-332 141-372 (433)
293 3sov_A LRP-6, low-density lipo 98.2 0.0015 5.1E-08 56.8 24.8 197 87-298 36-246 (318)
294 1n7d_A LDL receptor, low-densi 98.2 6.9E-06 2.4E-10 79.7 10.0 231 99-341 379-621 (699)
295 3s94_A LRP-6, low-density lipo 98.1 0.0023 8E-08 61.0 25.8 230 97-338 9-247 (619)
296 4a0p_A LRP6, LRP-6, low-densit 98.0 0.012 4.1E-07 56.3 29.9 174 156-335 15-198 (628)
297 1n7d_A LDL receptor, low-densi 98.0 8.7E-05 3E-09 72.0 14.2 201 86-299 406-623 (699)
298 2ism_A Putative oxidoreductase 97.8 0.014 4.9E-07 51.4 26.2 190 131-336 32-299 (352)
299 3sre_A PON1, serum paraoxonase 97.8 0.011 3.7E-07 51.9 22.9 199 89-298 53-308 (355)
300 3amr_A 3-phytase; beta-propell 97.8 0.016 5.5E-07 50.3 23.5 178 105-299 49-273 (355)
301 2xbg_A YCF48-like protein; pho 97.8 0.017 6E-07 50.2 30.2 234 85-336 35-280 (327)
302 3ott_A Two-component system se 97.7 0.041 1.4E-06 54.0 32.2 230 85-336 21-262 (758)
303 2ism_A Putative oxidoreductase 97.7 0.022 7.5E-07 50.2 26.8 228 85-322 30-333 (352)
304 3s94_A LRP-6, low-density lipo 97.7 0.04 1.4E-06 52.6 28.5 224 99-335 319-552 (619)
305 2vpj_A Kelch-like protein 12; 97.7 0.02 6.8E-07 49.1 23.4 230 96-336 14-280 (301)
306 2p9w_A MAL S 1 allergenic prot 97.7 0.017 6E-07 49.6 21.3 149 134-291 17-216 (334)
307 3pbp_A Nucleoporin NUP82; beta 97.6 0.0052 1.8E-07 54.5 17.5 112 219-336 25-160 (452)
308 2p9w_A MAL S 1 allergenic prot 97.6 0.0064 2.2E-07 52.3 17.5 151 218-402 16-206 (334)
309 1xi4_A Clathrin heavy chain; a 97.6 0.003 1E-07 64.4 17.6 219 107-338 49-293 (1630)
310 1xi4_A Clathrin heavy chain; a 97.6 0.0025 8.7E-08 64.9 17.1 231 92-338 72-335 (1630)
311 2xn4_A Kelch-like protein 2; s 97.5 0.038 1.3E-06 47.3 23.5 230 97-336 16-278 (302)
312 3kya_A Putative phosphatase; s 97.5 0.0086 3E-07 54.9 18.2 154 178-334 141-341 (496)
313 3a9g_A Putative uncharacterize 97.5 0.048 1.6E-06 48.0 27.6 232 85-322 28-330 (354)
314 2xbg_A YCF48-like protein; pho 97.5 0.044 1.5E-06 47.6 25.8 227 85-331 79-319 (327)
315 3sre_A PON1, serum paraoxonase 97.3 0.07 2.4E-06 46.7 25.7 136 193-334 82-252 (355)
316 3pbp_A Nucleoporin NUP82; beta 97.3 0.021 7.3E-07 50.7 17.3 136 189-330 36-208 (452)
317 1zgk_A Kelch-like ECH-associat 97.3 0.071 2.4E-06 45.8 22.1 232 95-336 23-289 (308)
318 3ii7_A Kelch-like protein 7; p 97.3 0.076 2.6E-06 45.5 24.2 228 97-336 12-274 (306)
319 2g8s_A Glucose/sorbosone dehyd 97.1 0.13 4.6E-06 45.1 27.0 243 86-333 18-351 (353)
320 3a9g_A Putative uncharacterize 97.1 0.14 4.8E-06 45.0 26.3 192 130-335 29-297 (354)
321 3ei3_A DNA damage-binding prot 96.9 0.51 1.7E-05 48.5 34.0 251 100-400 486-756 (1158)
322 1zgk_A Kelch-like ECH-associat 96.9 0.18 6.2E-06 43.2 20.0 173 156-336 39-242 (308)
323 2vpj_A Kelch-like protein 12; 96.8 0.21 7.2E-06 42.6 22.3 173 156-336 31-233 (301)
324 3ott_A Two-component system se 96.7 0.53 1.8E-05 46.1 30.0 233 86-336 324-588 (758)
325 3s25_A Hypothetical 7-bladed b 96.7 0.25 8.5E-06 42.3 22.9 172 137-333 23-213 (302)
326 4asc_A Kelch repeat and BTB do 96.6 0.28 9.6E-06 42.1 24.1 218 99-324 7-253 (315)
327 2uvk_A YJHT; unknown function, 96.5 0.38 1.3E-05 42.1 21.6 138 194-337 168-345 (357)
328 3das_A Putative oxidoreductase 96.4 0.34 1.2E-05 42.2 17.7 160 174-337 30-236 (347)
329 2xn4_A Kelch-like protein 2; s 96.3 0.42 1.4E-05 40.6 21.1 173 156-336 30-231 (302)
330 2be1_A Serine/threonine-protei 96.3 0.045 1.5E-06 47.5 11.5 106 100-212 13-139 (339)
331 2uvk_A YJHT; unknown function, 96.2 0.59 2E-05 40.9 19.6 48 239-288 168-224 (357)
332 3ei3_A DNA damage-binding prot 96.1 1.5 5.1E-05 45.1 36.5 236 85-334 553-873 (1158)
333 1cru_A Protein (soluble quinop 95.9 0.69 2.4E-05 42.1 17.9 63 259-322 27-98 (454)
334 1cru_A Protein (soluble quinop 95.7 1.2 4E-05 40.6 26.0 107 85-191 26-159 (454)
335 3s25_A Hypothetical 7-bladed b 95.6 0.98 3.3E-05 38.5 25.0 214 93-333 21-252 (302)
336 1tl2_A L10, protein (tachylect 95.4 0.016 5.5E-07 46.5 4.6 68 259-332 41-114 (236)
337 2g8s_A Glucose/sorbosone dehyd 95.4 1.2 4.2E-05 38.9 25.0 135 131-275 19-214 (353)
338 3sbq_A Nitrous-oxide reductase 95.3 1.8 6.1E-05 40.0 23.3 219 95-322 140-453 (638)
339 1tl2_A L10, protein (tachylect 95.2 0.96 3.3E-05 36.4 16.0 148 176-336 41-210 (236)
340 3das_A Putative oxidoreductase 95.2 1.5 5E-05 38.2 29.0 232 79-322 25-326 (347)
341 2woz_A Kelch repeat and BTB do 94.9 1.6 5.5E-05 37.3 23.8 217 99-324 18-263 (318)
342 2be1_A Serine/threonine-protei 94.7 0.11 3.8E-06 45.1 8.2 111 186-300 10-140 (339)
343 2zwa_A Leucine carboxyl methyl 94.7 3.3 0.00011 40.0 23.3 197 95-294 396-639 (695)
344 3ii7_A Kelch-like protein 7; p 94.3 2.1 7.2E-05 36.3 22.6 191 96-293 55-275 (306)
345 4asc_A Kelch repeat and BTB do 93.6 3 0.0001 35.5 22.1 196 93-294 42-281 (315)
346 2zwa_A Leucine carboxyl methyl 93.4 6.1 0.00021 38.2 21.1 191 139-336 397-637 (695)
347 2woz_A Kelch repeat and BTB do 91.8 5.6 0.00019 33.9 20.4 195 93-295 53-292 (318)
348 3q6k_A 43.2 kDa salivary prote 91.7 6.6 0.00023 34.6 19.5 151 156-334 123-306 (381)
349 3sbq_A Nitrous-oxide reductase 90.8 10 0.00035 35.2 23.3 72 260-335 324-409 (638)
350 3zwu_A Alkaline phosphatase PH 89.4 11 0.00038 35.3 14.8 59 261-321 478-548 (592)
351 3b7f_A Glycosyl hydrolase, BNR 89.3 11 0.00037 33.3 24.9 59 260-321 233-296 (394)
352 2wg3_C Hedgehog-interacting pr 88.8 8.9 0.0003 34.9 13.5 105 217-325 16-160 (463)
353 2wg3_C Hedgehog-interacting pr 88.1 11 0.00038 34.2 13.7 55 259-314 14-79 (463)
354 4gq2_M Nucleoporin NUP120; bet 84.5 11 0.00039 37.8 12.7 38 260-298 237-274 (950)
355 3qhy_B Beta-lactamase inhibito 81.2 23 0.00078 29.6 17.1 184 130-336 63-248 (282)
356 4hvt_A Ritya.17583.B, post-pro 79.7 46 0.0016 32.2 21.4 177 156-336 156-383 (711)
357 3f7f_A Nucleoporin NUP120; nuc 79.2 16 0.00053 35.1 10.7 73 259-336 222-307 (729)
358 4a9v_A PHOX; hydrolase, beta-p 78.3 14 0.00047 34.4 9.8 60 260-321 477-548 (592)
359 4gq2_M Nucleoporin NUP120; bet 76.6 14 0.00047 37.2 10.2 38 304-341 236-273 (950)
360 4hvt_A Ritya.17583.B, post-pro 65.0 1E+02 0.0035 29.7 23.9 240 87-333 130-429 (711)
361 3b7f_A Glycosyl hydrolase, BNR 62.1 80 0.0027 27.5 20.4 65 259-325 177-254 (394)
362 4gz8_A Semaphorin-3A; multi-do 61.2 28 0.00096 33.2 8.2 58 272-329 431-495 (667)
363 4fhn_B Nucleoporin NUP120; pro 60.1 8.1 0.00028 39.8 4.7 38 260-298 239-276 (1139)
364 3no0_A DNA gyrase subunit A; D 57.5 81 0.0028 26.1 13.6 75 258-336 67-148 (276)
365 3qhy_B Beta-lactamase inhibito 56.7 84 0.0029 26.0 16.5 181 87-290 64-246 (282)
366 1q47_A Semaphorin 3A; beta pro 55.3 27 0.00091 32.0 6.8 69 261-329 406-487 (495)
367 3q6k_A 43.2 kDa salivary prote 55.1 1.1E+02 0.0037 26.8 29.9 206 84-321 85-341 (381)
368 4fhn_B Nucleoporin NUP120; pro 47.5 48 0.0017 34.1 8.0 36 133-173 241-276 (1139)
369 4a9v_A PHOX; hydrolase, beta-p 45.6 67 0.0023 30.0 7.7 57 177-233 477-549 (592)
370 1sqj_A OXG-RCBH, oligoxylogluc 44.7 1.6E+02 0.0056 28.7 11.0 63 258-322 14-83 (789)
371 3f7f_A Nucleoporin NUP120; nuc 43.5 1.3E+02 0.0043 29.1 9.4 37 86-124 222-259 (729)
372 3uc1_A DNA gyrase subunit A; D 41.3 1.7E+02 0.0057 25.0 14.3 106 226-337 109-231 (327)
373 3zwu_A Alkaline phosphatase PH 37.7 1.1E+02 0.0039 28.6 8.2 57 219-276 480-548 (592)
374 2cn3_A Xyloglucanase, beta-1,4 37.2 2.9E+02 0.01 26.6 11.6 75 260-336 24-112 (737)
375 3nvq_A Semaphorin-7A; beta-pro 36.9 1E+02 0.0035 28.9 7.6 58 272-329 382-444 (590)
376 3al9_A Plexin-A2; beta-propell 36.5 1E+02 0.0034 28.6 7.5 69 260-329 401-476 (539)
377 1olz_A Semaphorin 4D; developm 32.7 1.8E+02 0.0061 27.8 8.8 69 261-329 399-477 (663)
378 3hx6_A Type 4 fimbrial biogene 31.1 3.3E+02 0.011 25.4 10.2 55 283-337 225-287 (570)
379 3no0_A DNA gyrase subunit A; D 29.3 2.4E+02 0.0082 23.2 15.2 150 86-248 24-196 (276)
380 2zux_A YESW protein; beta-prop 28.1 3.7E+02 0.013 25.0 20.6 151 157-316 230-426 (591)
381 3mvd_K Regulator of chromosome 23.8 3.7E+02 0.013 23.5 26.3 188 131-335 76-323 (423)
382 1zvt_A Topoisomerase IV subuni 22.6 3.1E+02 0.011 22.2 10.4 74 259-336 84-165 (256)
383 3uc1_A DNA gyrase subunit A; D 20.6 3.9E+02 0.013 22.6 19.9 158 174-336 93-281 (327)
384 3mez_B Mannose-specific lectin 20.1 2.2E+02 0.0075 19.5 9.7 27 307-335 59-85 (113)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=314.64 Aligned_cols=278 Identities=16% Similarity=0.247 Sum_probs=245.2
Q ss_pred cccCCCCCCeEEEEEcCC----CCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCC
Q 015650 79 STSSSPPPTLLHISFNQD----HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d----~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~ 153 (403)
....+|.+.|++++|+|+ +.+|++|+ |+.|+||++..........+. +|...|.++.+++++..+++++.|
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~-gh~~~v~~~~~~~~~~~l~s~s~D--- 101 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLE-GHQLGVVSVDISHTLPIAASSSLD--- 101 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECSSSSEEEEEETT---
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeec-cCCCCEEEEEECCCCCEEEEEeCC---
Confidence 456789999999999875 57899998 555999999877766556676 899999999999999999999999
Q ss_pred CCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeE
Q 015650 154 PLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (403)
Q Consensus 154 ~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (403)
+.|++||+.+++.+..+. +...+.+++|+|++.+++ .|+.|++||+++++....+..+...+..++|+|+++.
T Consensus 102 --~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~- 178 (321)
T 3ow8_A 102 --AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY- 178 (321)
T ss_dssp --SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE-
T ss_pred --CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE-
Confidence 999999999999999888 788899999999999888 3899999999999998888888888999999999874
Q ss_pred EEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEE
Q 015650 230 VLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (403)
+++ |+.|+.|++||+++++ +..+.+|...|.+++|+|++++|++++.|+. |+|||+++++.+..+.+ |...|.+
T Consensus 179 -las-g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~ 253 (321)
T 3ow8_A 179 -LAS-GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-IKIYDVQHANLAGTLSG--HASWVLN 253 (321)
T ss_dssp -EEE-EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC-EEEEETTTCCEEEEECC--CSSCEEE
T ss_pred -EEE-EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe-EEEEECCCcceeEEEcC--CCCceEE
Confidence 443 4489999999998865 4567889999999999999999999999999 99999999999988886 7789999
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEe
Q 015650 309 LAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAF 388 (403)
Q Consensus 309 l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 388 (403)
++|+|++++|++++.|++|++||+.+++. +..+..|.+.|..++|
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~~~~-----------------------------------~~~~~~h~~~v~~v~~ 298 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGTRTC-----------------------------------VHTFFDHQDQVWGVKY 298 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEE-----------------------------------EEEECCCSSCEEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCEE-----------------------------------EEEEcCCCCcEEEEEE
Confidence 99999999999999999999999988763 3345667889999999
Q ss_pred ccCCCEEEEEccCCC
Q 015650 389 GHQKNTVVILGMDGR 403 (403)
Q Consensus 389 s~d~~~l~~~~~dG~ 403 (403)
+|++++|++++.||+
T Consensus 299 s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 299 NGNGSKIVSVGDDQE 313 (321)
T ss_dssp CTTSSEEEEEETTCC
T ss_pred CCCCCEEEEEeCCCe
Confidence 999999999999985
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-43 Score=323.69 Aligned_cols=278 Identities=15% Similarity=0.215 Sum_probs=248.1
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
....+.+|...|++++|+|++.+|++|+. +.|+|||+.+++.. ..+. +|...|.++.|++++..+++++.|
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~--~~l~-~h~~~V~~v~~~~~~~~l~sgs~D----- 171 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLK-GHTDSVQDISFDHSGKLLASCSAD----- 171 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE--EEEe-ccCCcEEEEEEcCCCCEEEEEeCC-----
Confidence 34567899999999999999999999985 45999999887765 5666 789999999999999999999999
Q ss_pred ceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEE
Q 015650 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (403)
++|++||+.+++++..+. |...|.+++|+|++.+++ .|++|++||+++++++..+.+|...+..+.+++++. ++
T Consensus 172 ~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~--~l 249 (410)
T 1vyh_C 172 MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT--LI 249 (410)
T ss_dssp SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS--EE
T ss_pred CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC--EE
Confidence 999999999999998888 999999999999998877 499999999999999999999999999999998877 34
Q ss_pred EeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCC--------------------CCEEEEEeCCCcEEEEEEcCC
Q 015650 232 VCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQD--------------------GQLLATSSTKGTLVRIFNTLD 290 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~--------------------g~~l~s~~~dg~~i~iwd~~~ 290 (403)
++ ++.|+.|++||++++. ...+..|...|.+++|+|+ |.+|++|+.|+. |++||+.+
T Consensus 250 ~s-~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~-i~iwd~~~ 327 (410)
T 1vyh_C 250 AS-CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVST 327 (410)
T ss_dssp EE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE-EEEEETTT
T ss_pred EE-EcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe-EEEEECCC
Confidence 44 4489999999998855 4567889999999999996 679999999999 99999999
Q ss_pred CcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeee
Q 015650 291 GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSE 370 (403)
Q Consensus 291 ~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (403)
++++..+.+ |...|++++|+|+|++|++++.||.|++||+.+++.
T Consensus 328 ~~~~~~~~~--h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~--------------------------------- 372 (410)
T 1vyh_C 328 GMCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--------------------------------- 372 (410)
T ss_dssp TEEEEEEEC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC---------------------------------
T ss_pred CceEEEEEC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce---------------------------------
Confidence 999999986 778999999999999999999999999999987763
Q ss_pred eeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 371 WSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 371 ~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+..+..|.+.|++++|+|++++|++|+.||+
T Consensus 373 --~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~ 403 (410)
T 1vyh_C 373 --MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 403 (410)
T ss_dssp --CEEEECCSSCEEEEEECSSSSCEEEEETTSE
T ss_pred --EEEEcCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence 3346778889999999999999999999984
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.6e-42 Score=310.45 Aligned_cols=280 Identities=13% Similarity=0.129 Sum_probs=243.8
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
....+.+|.+.|++++|+|++++|++|+.+ .|+|||+.+.+.. ..+. .|...+.++.|++++.++++++.|
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~--~~~~-~~~~~v~~~~~s~~~~~l~s~~~d----- 118 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKV--HAIP-LRSSWVMTCAYAPSGNYVACGGLD----- 118 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE--EEEE-CSSSCEEEEEECTTSSEEEEEETT-----
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcc--eEee-cCCccEEEEEECCCCCEEEEEeCC-----
Confidence 346788999999999999999999999854 5999999887765 4454 578889999999999999999999
Q ss_pred ceEEEEECCCCc----eeEEEe-cCCceeEEEEecCceEEE--ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCe
Q 015650 156 NKVMIWDDHQSR----CIGELS-FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (403)
Q Consensus 156 ~~i~iwd~~~~~----~~~~~~-~~~~i~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (403)
+.|++|++.+++ ....+. |...|.++.|++++.++. .|++|++||+++++.+..+.+|...+..++++|++.
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~- 197 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR- 197 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-
T ss_pred CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC-
Confidence 999999998763 444555 889999999999998766 499999999999999999999999999999999876
Q ss_pred EEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEE
Q 015650 229 LVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIY 307 (403)
Q Consensus 229 ~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~ 307 (403)
++++ |+.|+.|++||++.+. ...+.+|...|.+++|+|++++|++|+.|+. |++||+++++.+..+....+...|.
T Consensus 198 -~l~s-g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~~~~~~~v~ 274 (340)
T 1got_B 198 -LFVS-GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT-CRLFDLRADQELMTYSHDNIICGIT 274 (340)
T ss_dssp -EEEE-EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEE
T ss_pred -EEEE-EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc-EEEEECCCCcEEEEEccCCcccceE
Confidence 3444 4589999999998854 5667889999999999999999999999999 9999999998888776433445799
Q ss_pred EEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEE
Q 015650 308 SLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVA 387 (403)
Q Consensus 308 ~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (403)
+++|+|+|++|++|+.||.|++||+.+++. ...+.+|.+.|.+++
T Consensus 275 ~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~-----------------------------------~~~~~~h~~~v~~~~ 319 (340)
T 1got_B 275 SVSFSKSGRLLLAGYDDFNCNVWDALKADR-----------------------------------AGVLAGHDNRVSCLG 319 (340)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCE-----------------------------------EEEEECCSSCEEEEE
T ss_pred EEEECCCCCEEEEECCCCeEEEEEcccCcE-----------------------------------eeEeecCCCcEEEEE
Confidence 999999999999999999999999987762 344678899999999
Q ss_pred eccCCCEEEEEccCCC
Q 015650 388 FGHQKNTVVILGMDGR 403 (403)
Q Consensus 388 fs~d~~~l~~~~~dG~ 403 (403)
|+|||++|++|+.||+
T Consensus 320 ~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 320 VTDDGMAVATGSWDSF 335 (340)
T ss_dssp ECTTSSCEEEEETTSC
T ss_pred EcCCCCEEEEEcCCcc
Confidence 9999999999999985
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-42 Score=305.63 Aligned_cols=278 Identities=12% Similarity=0.134 Sum_probs=238.4
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
.+.++.+|.+.|++++|+|++++|++|+. +.|+|||+.++... ..+. .|...+.++.|++++..+++++.|
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~s~s~d----- 76 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEV--RSIQ-VTETPVRAGKFIARKNWIIVGSDD----- 76 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEEEGGGTEEEEEETT-----
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcee--EEee-ccCCcEEEEEEeCCCCEEEEECCC-----
Confidence 34678899999999999999999999984 55999999887765 5565 688899999999999999999999
Q ss_pred ceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCc-eeeeEeeccCCCceeEEEeeCCCeEE
Q 015650 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLV 230 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (403)
+.|++||+.+++.+..+. |...|.+++|+|++.+++ .|++|++||++++ .....+.+|...+..++|+|.+...
T Consensus 77 ~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~- 155 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST- 155 (304)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE-
T ss_pred CEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE-
Confidence 999999999999999998 999999999999998887 4999999999887 5566788899999999999954443
Q ss_pred EEeeCCccCeEEEEEccCCce--eEEeecCCceEEEEEcC--CCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccE
Q 015650 231 LVCPGLQKGQVRVEHYASKRT--KFIMAHDSRIACFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEI 306 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~~~~--~~~~~~~~~i~~~~~sp--~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v 306 (403)
+++ |+.|+.|++||++.... .....|...+..+.|+| ++.+|++++.|+. |++||+++++++..+.+ |...|
T Consensus 156 l~s-gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~~~~~~~~--h~~~v 231 (304)
T 2ynn_A 156 FAS-GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEG--HMSNV 231 (304)
T ss_dssp EEE-EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTEEEEEEEC--CSSCE
T ss_pred EEE-EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCccceeeCC--CCCCE
Confidence 343 45899999999987442 23345678899999987 7889999999999 99999999999999986 77899
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEE
Q 015650 307 YSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIV 386 (403)
Q Consensus 307 ~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (403)
.+++|+|++++|++++.||+|++||+.+++. ...+..+.+.+.++
T Consensus 232 ~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~-----------------------------------~~~~~~~~~~~~~~ 276 (304)
T 2ynn_A 232 SFAVFHPTLPIIISGSEDGTLKIWNSSTYKV-----------------------------------EKTLNVGLERSWCI 276 (304)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTTCCE-----------------------------------EEEECCSSSSEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCce-----------------------------------eeeccCCCccEEEE
Confidence 9999999999999999999999999998773 23355566788999
Q ss_pred EeccCCC--EEEEEccCC
Q 015650 387 AFGHQKN--TVVILGMDG 402 (403)
Q Consensus 387 ~fs~d~~--~l~~~~~dG 402 (403)
+|+|++. +|++|+.||
T Consensus 277 ~~~~~~~~~~~asg~~~g 294 (304)
T 2ynn_A 277 ATHPTGRKNYIASGFDNG 294 (304)
T ss_dssp EECTTCGGGCEEEEETTE
T ss_pred EECCCCCceEEEEecCCc
Confidence 9999875 688888886
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.1e-42 Score=309.32 Aligned_cols=282 Identities=12% Similarity=0.104 Sum_probs=242.1
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
....+.+|.+.|++++|+|++++|++|+.++ |+|||..+.+.. ..+. .+...+.++.|+|++..+++++.|
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~--~~~~-~~~~~v~~~~~sp~g~~lasg~~d----- 127 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKE--HAVT-MPCTWVMACAYAPSGCAIACGGLD----- 127 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE--EEEE-CSSSCCCEEEECTTSSEEEEESTT-----
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcc--eEEe-cCCCCEEEEEECCCCCEEEEeeCC-----
Confidence 4467889999999999999999999999555 999999877665 3443 467789999999999999999999
Q ss_pred ceEEEEECCCC------ceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeC
Q 015650 156 NKVMIWDDHQS------RCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQG 225 (403)
Q Consensus 156 ~~i~iwd~~~~------~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (403)
+.+++|++... .....+. |...|.++.|++++..++ .|++|++||+++++.+..+.+|...+..++++++
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 207 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCC
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeC
Confidence 99999998643 2344555 899999999999987776 4999999999999999999999999999999987
Q ss_pred CCeEEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcc
Q 015650 226 VGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRA 304 (403)
Q Consensus 226 ~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~ 304 (403)
.+..++++ |+.|+.|++||++++. ...+..|...|.+++|+|++.+|++++.|+. |++||+++++.+..+..+.+..
T Consensus 208 ~~g~~l~s-gs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-v~lwd~~~~~~~~~~~~~~~~~ 285 (354)
T 2pbi_B 208 ETGNTFVS-GGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT-CRLYDLRADREVAIYSKESIIF 285 (354)
T ss_dssp SSCCEEEE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCS
T ss_pred CCCCEEEE-EeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe-EEEEECCCCcEEEEEcCCCccc
Confidence 55445555 4589999999999855 4567889999999999999999999999999 9999999998887776544445
Q ss_pred cEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCce
Q 015650 305 EIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPY 384 (403)
Q Consensus 305 ~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (403)
.+.+++|+|+|++|++++.|+.|++||+.+++. +..+..|.+.|+
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~-----------------------------------~~~l~~h~~~v~ 330 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR-----------------------------------VSILFGHENRVS 330 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSE-----------------------------------EEEECCCSSCEE
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCCCce-----------------------------------EEEEECCCCcEE
Confidence 799999999999999999999999999988763 334667888999
Q ss_pred EEEeccCCCEEEEEccCCC
Q 015650 385 IVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 385 ~~~fs~d~~~l~~~~~dG~ 403 (403)
+++|+|||++|++|+.||+
T Consensus 331 ~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 331 TLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp EEEECTTSSCEEEEETTSE
T ss_pred EEEECCCCCEEEEEcCCCC
Confidence 9999999999999999984
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=308.45 Aligned_cols=273 Identities=13% Similarity=0.126 Sum_probs=220.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCC----------CeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCC
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDP----------FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP 151 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 151 (403)
..|...|.+++|+|||++|++++++++++|+... ........+ .+...|.+++|++++. +++++.|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~d~~-l~~~s~d- 102 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGV--QTEAGVADLTWVGERG-ILVASDS- 102 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEE--EESSCEEEEEEETTTE-EEEEETT-
T ss_pred ccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeee--ccCCCEEEEEEeCCCe-EEEEECC-
Confidence 3567789999999999999999988888887321 000000111 2446799999999975 4566677
Q ss_pred CCCCceEEEEECCCCceeEEEe-----cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEe
Q 015650 152 QYPLNKVMIWDDHQSRCIGELS-----FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVS 223 (403)
Q Consensus 152 ~~~~~~i~iwd~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 223 (403)
|.|+|||+.+++.+..+. |...|.+++|+|++.+++ .|++|++||+++++++..+.+|...+..++|+
T Consensus 103 ----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~ 178 (344)
T 4gqb_B 103 ----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAAS 178 (344)
T ss_dssp ----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEec
Confidence 999999999987654432 889999999999999888 48999999999999999999999999999999
Q ss_pred eCCCeEEEEeeCCccCeEEEEEccCCcee-EE--eecCCceEEEEEcC-CCCEEEEEeCCCcEEEEEEcCCCcEEEEEec
Q 015650 224 QGVGSLVLVCPGLQKGQVRVEHYASKRTK-FI--MAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (403)
Q Consensus 224 ~~~~~~~~~~~g~~d~~i~v~d~~~~~~~-~~--~~~~~~i~~~~~sp-~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (403)
+++..+++. ++.|+.|++||+++++.. .+ ..|...+.+++|+| ++++|++|+.|+. |+|||+++++++..+.+
T Consensus 179 ~~~~~~l~s--~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~-v~~wd~~~~~~~~~~~~ 255 (344)
T 4gqb_B 179 PHKDSVFLS--CSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT-VSLVDTKSTSCVLSSAV 255 (344)
T ss_dssp SSCTTEEEE--EETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE-EEEEESCC--CCEEEEC
T ss_pred CCCCCceee--eccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc-EEEEECCCCcEEEEEcC
Confidence 998775443 358999999999986543 33 34566799999999 5678899999999 99999999999999986
Q ss_pred CCCcccEEEEEeCCCC-CEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEE
Q 015650 300 GADRAEIYSLAFSSNA-QWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRL 378 (403)
Q Consensus 300 ~~~~~~v~~l~~s~d~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (403)
|...|++++|+|++ ++|++|+.|++|+|||+++++ +.++..
T Consensus 256 --h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~------------------------------------~~~~~~ 297 (344)
T 4gqb_B 256 --HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE------------------------------------LFRSQA 297 (344)
T ss_dssp --CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE------------------------------------EEEECC
T ss_pred --CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc------------------------------------EEEEcC
Confidence 77899999999998 579999999999999988765 233567
Q ss_pred eCCCceEEEeccCCC-EEEEEccCCC
Q 015650 379 VEGSPYIVAFGHQKN-TVVILGMDGR 403 (403)
Q Consensus 379 ~~~~~~~~~fs~d~~-~l~~~~~dG~ 403 (403)
|.+.|++++|+|+++ .|++++.||+
T Consensus 298 H~~~V~~v~~sp~~~~llas~s~D~~ 323 (344)
T 4gqb_B 298 HRDFVRDATWSPLNHSLLTTVGWDHQ 323 (344)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred CCCCEEEEEEeCCCCeEEEEEcCCCe
Confidence 889999999999986 5678999985
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=296.64 Aligned_cols=289 Identities=17% Similarity=0.228 Sum_probs=233.2
Q ss_pred cccCCCCC-CeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 79 STSSSPPP-TLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 79 ~~~~~~~~-~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
..+.+|.. .|.+++|+|+|++||+|+ |+.|+||++.+........+..+|...|.+++|++++.+|++++.| +
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-----~ 83 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-----A 83 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-----S
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-----C
Confidence 45678887 999999999999999998 5559999998776544444434799999999999999999999999 9
Q ss_pred eEEEEECCCCc--eeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCc---eeeeEeeccCCCceeEEEeeCCC
Q 015650 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADL---KLLHQIETIANPKGLCAVSQGVG 227 (403)
Q Consensus 157 ~i~iwd~~~~~--~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 227 (403)
.|++|++.++. .+..+. |...|.+++|+|++.+++ .|++|++||++++ +++..+..|...+..++|+|+++
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 99999988764 566676 899999999999999888 4899999999875 34566778889999999999987
Q ss_pred eEEEEeeCCccCeEEEEEccCCc---eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCC--------------
Q 015650 228 SLVLVCPGLQKGQVRVEHYASKR---TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD-------------- 290 (403)
Q Consensus 228 ~~~~~~~g~~d~~i~v~d~~~~~---~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~-------------- 290 (403)
. +++ ++.|+.|++||.+... ...+.+|...|.+++|+|+|++|++++.|+. |+|||...
T Consensus 164 ~--l~s-~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 164 L--LAS-ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp C--EEE-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEECTTCTTCCCCC---C
T ss_pred E--EEE-EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccccCCCCccceeeccCC
Confidence 4 343 3489999999998754 3567889999999999999999999999999 99999632
Q ss_pred -CcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeee
Q 015650 291 -GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSS 369 (403)
Q Consensus 291 -~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (403)
.+++..+.+ .|...|.+++|+|++..|++++.|+.|++|+++........ . +..
T Consensus 240 ~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~-----------------------~-~~~ 294 (345)
T 3fm0_A 240 SWKCICTLSG-FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP-----------------------T-FSL 294 (345)
T ss_dssp EEEEEEEECS-SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC-----------------------C-EEE
T ss_pred ccceeEEecC-CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee-----------------------e-EEE
Confidence 133444543 27789999999999999999999999999999876531110 0 000
Q ss_pred eeeeEEEEEeCCCceEEEeccCC-CEEEEEccCCC
Q 015650 370 EWSVAQFRLVEGSPYIVAFGHQK-NTVVILGMDGR 403 (403)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~fs~d~-~~l~~~~~dG~ 403 (403)
.......|.+.|++|+|+|++ ..|++|+.||+
T Consensus 295 --~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~ 327 (345)
T 3fm0_A 295 --TAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE 327 (345)
T ss_dssp --EEEETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred --EeeecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence 011123567899999999998 59999999985
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.2e-41 Score=304.81 Aligned_cols=275 Identities=14% Similarity=0.165 Sum_probs=217.6
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcC------C-cEEEEEcCCCeeEE--EEecccCcceeEEEEeeeCCeEEEeeCCCCC
Q 015650 81 SSSPPPTLLHISFNQDHGCFAAGTD------H-GFRIYNCDPFREIF--RRDFERGGGIGVVEMLFRCNILALVGGGPDP 151 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l~~~~~------~-~i~iw~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 151 (403)
...|...|++++|+|||++|++|++ + .|++|+...+.... .... .+|...|.+++|++++.+++++ .|
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~-~~~~~~V~~~~~s~d~~~l~~s-~d- 114 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAG-VQTEAGVTDVAWVSEKGILVAS-DS- 114 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEE-EECSSCEEEEEEETTTEEEEEE-TT-
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEeccc-CCCCCCEEEEEEcCCCCEEEEE-CC-
Confidence 3569999999999999999999985 3 37888765443210 0111 1477789999999998877654 45
Q ss_pred CCCCceEEEEECCCCceeEE--E---ecCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEe
Q 015650 152 QYPLNKVMIWDDHQSRCIGE--L---SFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVS 223 (403)
Q Consensus 152 ~~~~~~i~iwd~~~~~~~~~--~---~~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 223 (403)
|+|+|||+.+++.... + .|...|.+++|+|++.+++ .|++|++||+++++.+..+..|...+..++|+
T Consensus 115 ----g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 115 ----GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAAC 190 (357)
T ss_dssp ----SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ----CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 8999999988865432 2 2788999999999999888 48999999999999999999999999999999
Q ss_pred eCCCeEEEEeeCCccCeEEEEEccCCceeE---EeecCCceEEEEEcCC-CCEEEEEeCCCcEEEEEEcCCCcEEEEEec
Q 015650 224 QGVGSLVLVCPGLQKGQVRVEHYASKRTKF---IMAHDSRIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (403)
Q Consensus 224 ~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~---~~~~~~~i~~~~~sp~-g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (403)
++++.+++.. +.|+.|++||+++++... ...|...+.+++|+|+ +.+|++|+.|+. |++||+++++++..+..
T Consensus 191 ~~~~~~~~s~--~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~-i~~wd~~~~~~~~~~~~ 267 (357)
T 4g56_B 191 PGKDTIFLSC--GEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGN-VSLVNIKNPDSAQTSAV 267 (357)
T ss_dssp TTCSSCEEEE--ETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSC-EEEEESSCGGGCEEECC
T ss_pred cCCCceeeee--ccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccc-eeEEECCCCcEeEEEec
Confidence 9987655443 479999999998855332 3356778999999997 568899999999 99999999999988886
Q ss_pred CCCcccEEEEEeCCCC-CEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEE
Q 015650 300 GADRAEIYSLAFSSNA-QWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRL 378 (403)
Q Consensus 300 ~~~~~~v~~l~~s~d~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (403)
|...|++++|+|++ ++|++++.|++|+|||+++++. .+...
T Consensus 268 --~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~------------------------------------~~~~~ 309 (357)
T 4g56_B 268 --HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV------------------------------------FRDLS 309 (357)
T ss_dssp --CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE------------------------------------EEECC
T ss_pred --cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE------------------------------------eEECC
Confidence 67899999999987 5789999999999999987762 12346
Q ss_pred eCCCceEEEecc-CCCEEEEEccCCC
Q 015650 379 VEGSPYIVAFGH-QKNTVVILGMDGR 403 (403)
Q Consensus 379 ~~~~~~~~~fs~-d~~~l~~~~~dG~ 403 (403)
|.+.|++|+|+| |+++|++++.||+
T Consensus 310 H~~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 310 HRDFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred CCCCEEEEEEeCCCCCEEEEEcCCCe
Confidence 788999999998 8999999999985
No 9
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.4e-39 Score=292.84 Aligned_cols=293 Identities=31% Similarity=0.514 Sum_probs=234.2
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 80 TSSSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
....|.+.|++++|+|||++|++|++++++||++++.+....... +...+..+.+..+..+++++ .+ +.|+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~d-----~~v~ 84 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM---RHLSKVRMLHRTNYVAFVTG-VK-----EVVH 84 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC---SCCCEEEECTTSSEEEEECS-ST-----TEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec---CCeEEEEEcCCCCEEEEEEC-Cc-----cEEE
Confidence 347799999999999999999999999999999988766644333 33555666666665555444 44 7999
Q ss_pred EEECCCCceeEEEecCCceeEEEEecCceEEEecCeEEEEEcCCc-eeeeEeeccCCCceeEEEeeCCCeEEEEee-CCc
Q 015650 160 IWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLVLVCP-GLQ 237 (403)
Q Consensus 160 iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ 237 (403)
+||+.+++.+..+.+...|.++.++++...++.++.|++||+.++ +.+..+.. ....+++++ . +++++ |..
T Consensus 85 iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~--~la~~sg~~ 157 (355)
T 3vu4_A 85 IWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--G--LLVYSNEFN 157 (355)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--T--EEEEEESSC
T ss_pred EEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--c--EEEEeCCCc
Confidence 999999999999998889999999999988889999999999988 77776654 445677777 2 34444 779
Q ss_pred cCeEEEEEccCCc-----------------eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecC
Q 015650 238 KGQVRVEHYASKR-----------------TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG 300 (403)
Q Consensus 238 d~~i~v~d~~~~~-----------------~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~ 300 (403)
+|.|++||++.+. ...+.+|...|.+++|+|+|++|++|+.|++.|+|||+++++++..+..+
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g 237 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG 237 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 9999999999754 67788999999999999999999999999933999999999999999843
Q ss_pred CCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeC
Q 015650 301 ADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVE 380 (403)
Q Consensus 301 ~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (403)
.|...|++++|+|+|++|++++.|++|++||++.+...... .+. ..+++.++...|.+..+..+.
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~~~~~ 302 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH-------------ALK--GWINMKYFQSEWSLCNFKLSV 302 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE-------------ETT--TTEECCCCCCSSCSEEEECCC
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc-------------ccc--ceeeccccccccceeEEEecc
Confidence 47789999999999999999999999999999886532111 111 114667788889888877766
Q ss_pred CC---ceEEEeccCCCEEEEEccCCC
Q 015650 381 GS---PYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 381 ~~---~~~~~fs~d~~~l~~~~~dG~ 403 (403)
.. ...++|++|+++|++++.||+
T Consensus 303 ~~~~~~~~~a~~~d~~~l~~~~~dg~ 328 (355)
T 3vu4_A 303 DKHVRGCKIAWISESSLVVVWPHTRM 328 (355)
T ss_dssp CTTCCCCEEEESSSSEEEEEETTTTE
T ss_pred CCCCCceEEEEeCCCCEEEEEeCCCe
Confidence 43 477999999999999999984
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.5e-40 Score=289.74 Aligned_cols=286 Identities=16% Similarity=0.227 Sum_probs=232.9
Q ss_pred ccccCCCCCCeEEEEEcCCC-CEEEEEc-CCcEEEEEcCCCe---eEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCC
Q 015650 78 ESTSSSPPPTLLHISFNQDH-GCFAAGT-DHGFRIYNCDPFR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ 152 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~-~~l~~~~-~~~i~iw~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 152 (403)
...+.+|.+.|++++|+|++ ++|++|+ |+.|++|++.... ......+. +|...|.++.|++++.++++++.|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D-- 86 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK-GHSHIVQDCTLTADGAYALSASWD-- 86 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEETT--
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe-CCcccEEEEEECCCCCEEEEEeCC--
Confidence 45688999999999999965 8899988 5559999986422 22335665 799999999999999999999999
Q ss_pred CCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCC-
Q 015650 153 YPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG- 227 (403)
Q Consensus 153 ~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~- 227 (403)
++|++||+.+++.+..+. |...|.+++|+|++.+++ .|++|++||++ ++++..+.+|...+..+.+.|...
T Consensus 87 ---~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 87 ---KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp ---SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC---
T ss_pred ---CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCC
Confidence 999999999999999998 999999999999998888 48999999986 567778888999999999988542
Q ss_pred ---eEEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCc
Q 015650 228 ---SLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR 303 (403)
Q Consensus 228 ---~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~ 303 (403)
..++++ ++.|+.|++||++... ...+.+|...|.+++|+|+|++|++++.|+. |+|||+.+++.+..+.. .
T Consensus 163 ~~~~~~l~s-~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~-i~iwd~~~~~~~~~~~~---~ 237 (319)
T 3frx_A 163 DDDSVTIIS-AGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE-IMLWNLAAKKAMYTLSA---Q 237 (319)
T ss_dssp ---CCEEEE-EETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEEC---C
T ss_pred CCCccEEEE-EeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEecC---C
Confidence 234444 4589999999998855 4557789999999999999999999999999 99999999999988873 4
Q ss_pred ccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCc
Q 015650 304 AEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSP 383 (403)
Q Consensus 304 ~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (403)
..|.+++|+|++.+|++++.+ .+++|+++.......+..+ .. . ....++..+
T Consensus 238 ~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~------------------~~----~-----~~~~~~~~v 289 (319)
T 3frx_A 238 DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPE------------------FA----G-----YSKAAEPHA 289 (319)
T ss_dssp SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCC------------------CT----T-----CCGGGCCCE
T ss_pred CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCcc------------------cc----c-----cccCcCcce
Confidence 689999999999999988755 5999999876521111000 00 0 011234567
Q ss_pred eEEEeccCCCEEEEEccCCC
Q 015650 384 YIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 384 ~~~~fs~d~~~l~~~~~dG~ 403 (403)
..++|+|||++|++|+.||+
T Consensus 290 ~~~~~spdg~~l~sg~~Dg~ 309 (319)
T 3frx_A 290 VSLAWSADGQTLFAGYTDNV 309 (319)
T ss_dssp EEEEECTTSSEEEEEETTSC
T ss_pred eEEEECCCCCEEEEeecCce
Confidence 88999999999999999985
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.7e-41 Score=304.12 Aligned_cols=288 Identities=15% Similarity=0.164 Sum_probs=234.3
Q ss_pred CCCCccccCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCC
Q 015650 74 PSPAESTSSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ 152 (403)
Q Consensus 74 ~~~~~~~~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 152 (403)
......++.+|.+.|++++|+|++++|++|+.+ .|+|||+.+.+.. ..+. .|...+.+++|++++..+++++.|
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~--~~~~-~h~~~v~~~~~s~~g~~las~~~d-- 129 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKT--HAIK-LHCPWVMECAFAPNGQSVACGGLD-- 129 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEE--EEEE-CCCTTCCCCEECTTSSEEEECCSS--
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccc--eEEe-cCCCCEEEEEECCCCCEEEEeeCC--
Confidence 334456789999999999999999999999854 5999999887765 4555 688889999999999999999999
Q ss_pred CCCceEEEEECCCCc-------eeEEEe-cCCceeEEEEecCc-eEEE---ecCeEEEEEcCCceeeeEe-----eccCC
Q 015650 153 YPLNKVMIWDDHQSR-------CIGELS-FRSEVRSVKLRRDR-IIVV---LEQKIFVYNFADLKLLHQI-----ETIAN 215 (403)
Q Consensus 153 ~~~~~i~iwd~~~~~-------~~~~~~-~~~~i~~~~~~~~~-~~~~---~d~~i~i~d~~~~~~~~~~-----~~~~~ 215 (403)
+.+++|++.+.. ....+. |...|.++.|.|++ ..++ .|++|++||+++++.+..+ .+|..
T Consensus 130 ---~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 130 ---SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp ---SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred ---CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 999999986532 233455 88899999999964 3343 4999999999999888777 45777
Q ss_pred CceeEEEeeCCCeEEEEeeCCccCeEEEEEccC--CceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 015650 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (403)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~ 293 (403)
.+..+++++.+..+ +++ |+.|+.|++||++. .....+.+|...|.+++|+|++++|++|+.|++ |++||+++++.
T Consensus 207 ~v~~~~~~~~~~~~-l~s-gs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-i~lwd~~~~~~ 283 (380)
T 3iz6_a 207 DVLSLSINSLNANM-FIS-GSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT-CRLFDMRTGHQ 283 (380)
T ss_dssp CEEEEEECSSSCCE-EEE-EETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC-EEEEETTTTEE
T ss_pred CeEEEEeecCCCCE-EEE-EECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe-EEEEECCCCcE
Confidence 78888887744433 343 45899999999974 456778899999999999999999999999999 99999999999
Q ss_pred EEEEecCCC-----cccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceee
Q 015650 294 LQEVRRGAD-----RAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFS 368 (403)
Q Consensus 294 ~~~~~~~~~-----~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (403)
+..+..+.. ...|++++|+|+|++|++|+.||.|++||+.+++....+.
T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~-------------------------- 337 (380)
T 3iz6_a 284 LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLG-------------------------- 337 (380)
T ss_dssp EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEEC--------------------------
T ss_pred EEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEe--------------------------
Confidence 888765321 1248999999999999999999999999998776311000
Q ss_pred eeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 369 SEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
.....|.+.|++++|+|||++|++|+.||+
T Consensus 338 -----~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 338 -----TLQNSHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp -----CSCSSCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred -----cccCCCCCceEEEEECCCCCEEEEeeCCCC
Confidence 001356788999999999999999999985
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.3e-39 Score=284.22 Aligned_cols=280 Identities=14% Similarity=0.253 Sum_probs=237.6
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
....+.+|...|++++|+|++++|++|+. +.|+||++.+++.. ..+. +|...|.++.|++++..+++++.|
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~~~d----- 86 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTIS-GHKLGISDVAWSSDSNLLVSASDD----- 86 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccc--hhhc-cCCCceEEEEEcCCCCEEEEECCC-----
Confidence 34567899999999999999999999984 55999999877654 5565 788999999999999999999999
Q ss_pred ceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEE
Q 015650 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (403)
+.|++||+.+++.+..+. |...|.++.|+|++.+++ .|+.|++||+++++.+..+..|...+..++++++++. +
T Consensus 87 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l 164 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL--I 164 (312)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE--E
T ss_pred CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCE--E
Confidence 999999999999999998 899999999999998888 4899999999999999999999999999999998874 3
Q ss_pred EeeCCccCeEEEEEccCCcee-EE-eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCccc-EEE
Q 015650 232 VCPGLQKGQVRVEHYASKRTK-FI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAE-IYS 308 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~~~~-~~-~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~-v~~ 308 (403)
++ ++.|+.|++||++++... .+ ..+...+.+++|+|++++|++++.|+. |++||+.+++++..+..+..... +..
T Consensus 165 ~~-~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
T 4ery_A 165 VS-SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTYTGHKNEKYCIFA 242 (312)
T ss_dssp EE-EETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE-EEEEETTTTEEEEEECSSCCSSSCCCE
T ss_pred EE-EeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe-EEEEECCCCcEEEEEEecCCceEEEEE
Confidence 33 348999999999986543 33 356678999999999999999999999 99999999999988886432222 333
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEe
Q 015650 309 LAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAF 388 (403)
Q Consensus 309 l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 388 (403)
....+++.+|++|+.||.|++||+.+++. +..+..|.+.+..++|
T Consensus 243 ~~~~~~~~~l~sg~~dg~i~vwd~~~~~~-----------------------------------~~~~~~h~~~v~~~~~ 287 (312)
T 4ery_A 243 NFSVTGGKWIVSGSEDNLVYIWNLQTKEI-----------------------------------VQKLQGHTDVVISTAC 287 (312)
T ss_dssp EEECSSSCEEEECCTTSCEEEEETTTCCE-----------------------------------EEEECCCSSCEEEEEE
T ss_pred EEEeCCCcEEEEECCCCEEEEEECCCchh-----------------------------------hhhhhccCCcEEEEee
Confidence 33447889999999999999999988763 3446778889999999
Q ss_pred ccCCCEEEEEc--cCCC
Q 015650 389 GHQKNTVVILG--MDGR 403 (403)
Q Consensus 389 s~d~~~l~~~~--~dG~ 403 (403)
+|+++.|++++ .||+
T Consensus 288 ~p~~~~l~s~~~~~d~~ 304 (312)
T 4ery_A 288 HPTENIIASAALENDKT 304 (312)
T ss_dssp CSSSSEEEEEECTTTCC
T ss_pred cCcCCceEEEEccCCcc
Confidence 99999999987 5764
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.5e-39 Score=288.47 Aligned_cols=289 Identities=17% Similarity=0.175 Sum_probs=228.5
Q ss_pred ccccCCCCCCeEEEEE-----cC-CCCEEEEEc-CCcEEEEEcCCCe-----eEEEEecccCcceeEEEEeeeCCeEEEe
Q 015650 78 ESTSSSPPPTLLHISF-----NQ-DHGCFAAGT-DHGFRIYNCDPFR-----EIFRRDFERGGGIGVVEMLFRCNILALV 145 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~-----s~-d~~~l~~~~-~~~i~iw~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 145 (403)
...+.+|.+.|++++| ++ ++++|++|+ |+.|+||++...+ ......+. +|...|.++.|++++.+++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~-~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT-GHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC-CCSSCEEEEEECSSTTEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhc-cCCCceEEEEECCCCCEEE
Confidence 3568899999999999 76 999999998 4559999987542 23335565 7999999999999999999
Q ss_pred eCCCCCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEee---ccCCCce
Q 015650 146 GGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIE---TIANPKG 218 (403)
Q Consensus 146 s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~---~~~~~~~ 218 (403)
+++.| ++|++||+.+++.+..+. |...|.+++|+|++.+++ .|++|++||+... ...... .|...+.
T Consensus 93 s~s~D-----~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 93 SSSWD-----KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVS 166 (343)
T ss_dssp EEETT-----SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEE
T ss_pred EEcCC-----CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceee
Confidence 99999 999999999999999988 999999999999998887 4899999999743 333332 5777889
Q ss_pred eEEEeeCCCe--------EEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcC-
Q 015650 219 LCAVSQGVGS--------LVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL- 289 (403)
Q Consensus 219 ~~~~~~~~~~--------~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~- 289 (403)
.++++|++.. .++++ ++.|+.|++||........+.+|...|.+++|+|+|++|++|+.|+. |++||+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s-~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~-v~iwd~~~ 244 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFAS-VGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKK-LLIWDILN 244 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEE-EETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCE-EEEEESSC
T ss_pred eeeeccccccccccCCCCCEEEE-EcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCe-EEEEECCC
Confidence 9999987631 24454 45899999999766667778899999999999999999999999999 9999994
Q ss_pred CCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCC--CCCCCCCCCCCCccccccccccccccee
Q 015650 290 DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA--RSEPRSTSDPTLPTSSLSFIKGVLPKYF 367 (403)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (403)
.......+. +...|.+++|+|++++|+++ .|+.|++|++.+++... .+... .+
T Consensus 245 ~~~~~~~~~---~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~-----------------~~---- 299 (343)
T 2xzm_R 245 LTYPQREFD---AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAE-----------------PI---- 299 (343)
T ss_dssp CSSCSEEEE---CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCC-----------------SG----
T ss_pred Ccccceeec---CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecC-----------------cc----
Confidence 444444554 34579999999999988755 57789999998876432 11100 00
Q ss_pred eeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 368 SSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
........|...+.+++|+|+|++|++|+.||+
T Consensus 300 ---~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~ 332 (343)
T 2xzm_R 300 ---TKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGV 332 (343)
T ss_dssp ---GGBTTBCCSCCCEEEEEECSSSCCEEEEETTSE
T ss_pred ---hhhhhhcCCCCceEEEEECCCCCeEEEecCCce
Confidence 000001245667899999999999999999984
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.1e-39 Score=292.96 Aligned_cols=272 Identities=16% Similarity=0.188 Sum_probs=227.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEeccc-----------------CcceeEEEEeeeCCeEEEe
Q 015650 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFER-----------------GGGIGVVEMLFRCNILALV 145 (403)
Q Consensus 83 ~~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~~~~~~~ 145 (403)
+|...|.+++|+|||++||+|+++.++||++.+++... .+.. .+...|.+++|++++..++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVA--RLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEE--EECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEE--EecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 59999999999999999999998889999998876553 3321 1122489999999999999
Q ss_pred eCCCCCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEE
Q 015650 146 GGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCA 221 (403)
Q Consensus 146 s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 221 (403)
+++.| +.|++||+.+++.+..+. |...|.+++|+|++.+++ .|++|++||+++++....+. +...+..++
T Consensus 140 s~~~d-----~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~ 213 (393)
T 1erj_A 140 TGAED-----RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVA 213 (393)
T ss_dssp EEETT-----SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEE
T ss_pred EEcCC-----CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEE
Confidence 99999 999999999999998888 999999999999998887 48999999999998877775 456788899
Q ss_pred Eee-CCCeEEEEeeCCccCeEEEEEccCCcee-EE-------eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCC-
Q 015650 222 VSQ-GVGSLVLVCPGLQKGQVRVEHYASKRTK-FI-------MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG- 291 (403)
Q Consensus 222 ~~~-~~~~~~~~~~g~~d~~i~v~d~~~~~~~-~~-------~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~- 291 (403)
++| +++ ++++ |+.|+.|++||++++... .+ .+|...|.+++|+|+|++|++++.|+. |++||+++.
T Consensus 214 ~~~~~~~--~l~~-~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~-v~~wd~~~~~ 289 (393)
T 1erj_A 214 VSPGDGK--YIAA-GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNAN 289 (393)
T ss_dssp ECSTTCC--EEEE-EETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE-EEEEEC----
T ss_pred EECCCCC--EEEE-EcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEECCCCC
Confidence 998 444 3343 458999999999886543 23 478999999999999999999999999 999999763
Q ss_pred -----------cEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCccccccccc
Q 015650 292 -----------TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIK 360 (403)
Q Consensus 292 -----------~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (403)
.+...+.+ |...|.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~----------------------- 344 (393)
T 1erj_A 290 NKSDSKTPNSGTCEVTYIG--HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP----------------------- 344 (393)
T ss_dssp -----------CEEEEEEC--CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE-----------------------
T ss_pred CcccccCCCCCcceEEEec--ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE-----------------------
Confidence 34445554 778999999999999999999999999999988773
Q ss_pred ccccceeeeeeeeEEEEEeCCCceEEEecc------CCCEEEEEccCCC
Q 015650 361 GVLPKYFSSEWSVAQFRLVEGSPYIVAFGH------QKNTVVILGMDGR 403 (403)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~------d~~~l~~~~~dG~ 403 (403)
+..+++|.+.|..++|++ ++++|++|+.||+
T Consensus 345 ------------~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 345 ------------LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp ------------EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred ------------EEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence 344678888999999876 7899999999984
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.7e-39 Score=309.07 Aligned_cols=255 Identities=12% Similarity=0.161 Sum_probs=210.0
Q ss_pred CCccccCCCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCC
Q 015650 76 PAESTSSSPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (403)
Q Consensus 76 ~~~~~~~~~~~~i~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~ 154 (403)
.....+.+|...|++++|+|||++||+|+. +.|+|||+.+.+......+. +|...|.+++|++++..+++++.+.. .
T Consensus 50 ~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~-~~~~~v~~v~fs~dg~~l~~~~~~~~-~ 127 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIP-VFSGPVKDISWDSESKRIAAVGEGRE-R 127 (611)
T ss_dssp SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEE-CSSSCEEEEEECTTSCEEEEEECCSS-C
T ss_pred ccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeec-ccCCceEEEEECCCCCEEEEEECCCC-c
Confidence 345677899999999999999999999985 45999999765554445565 68889999999999988887664300 0
Q ss_pred CceEEEEECCCCceeEEEe-cCCceeEEEEecCce-EEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeE
Q 015650 155 LNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (403)
Q Consensus 155 ~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (403)
.+.|++|| .++.+..+. |...|.+++|+|++. .++ .|++|++||..+++++..+.+|...+..++|+|+++
T Consensus 128 ~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~-- 203 (611)
T 1nr0_A 128 FGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS-- 203 (611)
T ss_dssp SEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS--
T ss_pred eeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC--
Confidence 14677776 566667777 999999999999985 355 489999999999999999999999999999999987
Q ss_pred EEEeeCCccCeEEEEEccCCcee-EEe-------ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEec--
Q 015650 230 VLVCPGLQKGQVRVEHYASKRTK-FIM-------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR-- 299 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~~~-~~~-------~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~-- 299 (403)
++++ ++.|+.|++||+.++... .+. +|...|.+++|+|+|++|++++.|++ |+|||+.+++++.++..
T Consensus 204 ~las-~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~-v~lWd~~~~~~~~~~~~~~ 281 (611)
T 1nr0_A 204 LFAS-TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT-IKIWNVATLKVEKTIPVGT 281 (611)
T ss_dssp EEEE-EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEECCS
T ss_pred EEEE-EECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe-EEEEeCCCCceeeeecCCC
Confidence 3444 348999999998875543 342 79999999999999999999999999 99999998877665431
Q ss_pred ---------------------------------------CCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCC
Q 015650 300 ---------------------------------------GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (403)
Q Consensus 300 ---------------------------------------~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~ 338 (403)
..|...|++++|+|||++|++++.|++|++||+.+++..
T Consensus 282 ~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 282 RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISN 359 (611)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 136788999999999999999999999999999987643
No 16
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=281.28 Aligned_cols=284 Identities=12% Similarity=0.164 Sum_probs=242.1
Q ss_pred CCCCCCCCccccCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC
Q 015650 70 QMPLPSPAESTSSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG 148 (403)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 148 (403)
...........+.+|.+.|++++|+|++++|++++.+ .|+||++.+++.. ..+. +|...|.++.|++++..+++++
T Consensus 17 ~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~~ 93 (369)
T 3zwl_B 17 YFQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERL--GTLD-GHTGTIWSIDVDCFTKYCVTGS 93 (369)
T ss_dssp CSSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEE--EEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred EEeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhh--hhhh-hcCCcEEEEEEcCCCCEEEEEe
Confidence 3444455557789999999999999999999999855 5999999887765 5565 7889999999999999999999
Q ss_pred CCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE---ec-----CeEEEEEcCCce-----------eeeE
Q 015650 149 PDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LE-----QKIFVYNFADLK-----------LLHQ 209 (403)
Q Consensus 149 ~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d-----~~i~i~d~~~~~-----------~~~~ 209 (403)
.| +.|++||+.+++.+..+.+...|.+++|+|++.+++ .+ +.|++||+..+. .+..
T Consensus 94 ~d-----g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~ 168 (369)
T 3zwl_B 94 AD-----YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK 168 (369)
T ss_dssp TT-----TEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred CC-----CeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence 88 999999999999999999999999999999999888 25 899999998653 2334
Q ss_pred eeccCC--CceeEEEeeCCCeEEEEeeCCccCeEEEEEccC--CceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEE
Q 015650 210 IETIAN--PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRI 285 (403)
Q Consensus 210 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~i 285 (403)
+..+.. .+..++++++++.++. ++.|+.|++||++. .....+..|...|.+++|+|++++|++++.|+. |++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~---~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v 244 (369)
T 3zwl_B 169 IITHEGLDAATVAGWSTKGKYIIA---GHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN-SFL 244 (369)
T ss_dssp EECCTTCCCEEEEEECGGGCEEEE---EETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEE
T ss_pred ccCCcCccceeEEEEcCCCCEEEE---EcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce-EEE
Confidence 444444 7888999998874433 34789999999997 445667789999999999999999999999999 999
Q ss_pred EEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCC--------------cEEEEEeecCCCCCCCCCCCCCCCCC
Q 015650 286 FNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG--------------TVHVFNLKVNSGSARSEPRSTSDPTL 351 (403)
Q Consensus 286 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg--------------~v~iwd~~~~~~~~~~~~~~~~~~~~ 351 (403)
||+.+++.+..+. +...+..++|+|+++++++++.++ .+++||+.+++.
T Consensus 245 ~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-------------- 307 (369)
T 3zwl_B 245 VDVSTLQVLKKYE---TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE-------------- 307 (369)
T ss_dssp EETTTCCEEEEEE---CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE--------------
T ss_pred EECCCCceeeeec---CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc--------------
Confidence 9999999999888 567899999999999999999888 788888877663
Q ss_pred cccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 352 PTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+..+..|.+.++.++|+|++++|++++.||+
T Consensus 308 ---------------------~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 338 (369)
T 3zwl_B 308 ---------------------IGRVQGHFGPLNTVAISPQGTSYASGGEDGF 338 (369)
T ss_dssp ---------------------EEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ---------------------hhheecccCcEEEEEECCCCCEEEEEcCCCe
Confidence 3456778899999999999999999999984
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.1e-38 Score=300.41 Aligned_cols=271 Identities=20% Similarity=0.301 Sum_probs=237.4
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCce
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (403)
..+.+|...|.+++|+|++++|+++++++ |++|+...... ..+. +|...+.+++|++++..+++++.+ +.
T Consensus 297 ~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~---~~~~-~~~~~v~~~~~s~~g~~l~~~~~d-----g~ 367 (577)
T 2ymu_A 297 QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHL---QTLT-GHSSSVWGVAFSPDGQTIASASDD-----KT 367 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEE---EEEC-CCSSCEEEEEECTTSSEEEEEETT-----SE
T ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCee---EEEe-CCCCCEEEEEECCCCCEEEEEeCC-----CE
Confidence 45678999999999999999999998554 99999865443 3444 688899999999999999999998 99
Q ss_pred EEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEe
Q 015650 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (403)
|++|| .+++.+..+. |...|.+++|+|++.+++ .|+.|++||. +++.+..+..|...+..++|+|+++. +++
T Consensus 368 v~~~~-~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~--l~~ 443 (577)
T 2ymu_A 368 VKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQT--IAS 443 (577)
T ss_dssp EEEEE-TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSE--EEE
T ss_pred EEEEc-CCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCE--EEE
Confidence 99999 4677788887 899999999999999887 3899999995 67888889999999999999999874 343
Q ss_pred eCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCC
Q 015650 234 PGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (403)
Q Consensus 234 ~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 313 (403)
++.|+.|++||...+....+.+|...|.+++|+|++++|++++.|+. |++||. +++++..+.+ |...|++++|+|
T Consensus 444 -~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~-i~iw~~-~~~~~~~~~~--h~~~v~~l~~s~ 518 (577)
T 2ymu_A 444 -ASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWNR-NGQLLQTLTG--HSSSVRGVAFSP 518 (577)
T ss_dssp -EETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE-EEEEET-TSCEEEEEEC--CSSCEEEEEECT
T ss_pred -EcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-EEEEcC-CCCEEEEEeC--CCCCEEEEEEcC
Confidence 34899999999988888889999999999999999999999999999 999994 7888888886 778999999999
Q ss_pred CCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCC
Q 015650 314 NAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKN 393 (403)
Q Consensus 314 d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~ 393 (403)
||++|++++.||.|++||+ +++. +..+.+|.+.|+.++|+|||+
T Consensus 519 dg~~l~s~~~dg~v~lwd~-~~~~-----------------------------------~~~~~~h~~~v~~~~fs~dg~ 562 (577)
T 2ymu_A 519 DGQTIASASDDKTVKLWNR-NGQL-----------------------------------LQTLTGHSSSVWGVAFSPDGQ 562 (577)
T ss_dssp TSSCEEEEETTSEEEEECT-TSCE-----------------------------------EEEEECCSSCEEEEEECTTSS
T ss_pred CCCEEEEEECcCEEEEEeC-CCCE-----------------------------------EEEEcCCCCCEEEEEEcCCCC
Confidence 9999999999999999995 3331 445788899999999999999
Q ss_pred EEEEEccCCC
Q 015650 394 TVVILGMDGR 403 (403)
Q Consensus 394 ~l~~~~~dG~ 403 (403)
+|++++.||+
T Consensus 563 ~l~s~~~D~~ 572 (577)
T 2ymu_A 563 TIASASSDKT 572 (577)
T ss_dssp CEEEEETTSC
T ss_pred EEEEEeCCCE
Confidence 9999999985
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-38 Score=280.05 Aligned_cols=280 Identities=14% Similarity=0.182 Sum_probs=218.1
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEec-ccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
...+.+|.+.|.+++|+++ +|++|+ |+.|+||++..........+ ..+|...|.+++|++++..+++++.|
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D----- 79 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD----- 79 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT-----
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC-----
Confidence 3457789999999999998 888888 55599999986543333445 32388999999999999999999999
Q ss_pred ceEEEEECCC-------CceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCC----ceeeeEeeccCCCceeE
Q 015650 156 NKVMIWDDHQ-------SRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFAD----LKLLHQIETIANPKGLC 220 (403)
Q Consensus 156 ~~i~iwd~~~-------~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~----~~~~~~~~~~~~~~~~~ 220 (403)
+.|++||+.. .+.+..+. |...|.+++|+|++.+++ .|++|++||++. .+++..+..|...+..+
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v 159 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV 159 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence 9999999853 34566666 899999999999999888 399999999943 25667788899999999
Q ss_pred EEeeCCCeEEEEeeCCccCeEEEEEccCC---ceeEEeecCCceEEEEEcCC--CCEEEEEeCCCcEEEEEEcCCC----
Q 015650 221 AVSQGVGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQD--GQLLATSSTKGTLVRIFNTLDG---- 291 (403)
Q Consensus 221 ~~~~~~~~~~~~~~g~~d~~i~v~d~~~~---~~~~~~~~~~~i~~~~~sp~--g~~l~s~~~dg~~i~iwd~~~~---- 291 (403)
+|+|++. ++++ ++.|+.|++||...+ .+..+.+|...|.+++|+|+ +.+|++++.|++ |++||+..+
T Consensus 160 ~~~p~~~--~l~s-~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~-v~iw~~~~~~~~~ 235 (330)
T 2hes_X 160 IWHPSEA--LLAS-SSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST-VRVWKYMGDDEDD 235 (330)
T ss_dssp EECSSSS--EEEE-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC-EEEEEEEEECTTS
T ss_pred EECCCCC--EEEE-EcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe-EEEEEecCCCccc
Confidence 9999877 3444 448999999998764 45677899999999999998 779999999999 999998754
Q ss_pred ----cEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCccccccccccccccee
Q 015650 292 ----TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYF 367 (403)
Q Consensus 292 ----~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (403)
.+...+.. .|...|.+++|++++ +|++++.||.|+||++.+++..
T Consensus 236 ~~~~~~~~~~~~-~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~----------------------------- 284 (330)
T 2hes_X 236 QQEWVCEAILPD-VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWK----------------------------- 284 (330)
T ss_dssp CEEEEEEEECCS-CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEE-----------------------------
T ss_pred cceeEEeeeccc-ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceE-----------------------------
Confidence 33334432 277899999999765 8999999999999999865310
Q ss_pred eeeeeeEE-EEEeCC-CceEEEecc--CCCEEEEEccCCC
Q 015650 368 SSEWSVAQ-FRLVEG-SPYIVAFGH--QKNTVVILGMDGR 403 (403)
Q Consensus 368 ~~~~~~~~-~~~~~~-~~~~~~fs~--d~~~l~~~~~dG~ 403 (403)
.+.. ...|.. .+.+++|+| +++.|++|+.||+
T Consensus 285 ----~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~ 320 (330)
T 2hes_X 285 ----VFAKRALCHGVYEINVVKWLELNGKTILATGGDDGI 320 (330)
T ss_dssp ----EEEEESCTTTTSCEEEEEEC-----CCEEEEETTSE
T ss_pred ----EEeccccccccceEEEEEEecCCCceEEEEecCCCc
Confidence 0111 123444 789999999 7899999999984
No 19
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=277.56 Aligned_cols=241 Identities=16% Similarity=0.247 Sum_probs=216.6
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCce
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (403)
..+.+|...|.+++|++++.++++++ |+.|++||+.+++.. ..+. .+...+..+.|++++..+++++.+ +.
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~--~~~~-~~~~~~~~~~~spdg~~l~~g~~d-----g~ 145 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSID-AGPVDAWTLAFSPDSQYLATGTHV-----GK 145 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCTTCCCCEEECTTSSEEEEECTT-----SE
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEE--EEEe-CCCccEEEEEECCCCCEEEEEcCC-----Cc
Confidence 35789999999999999999999998 555999999988765 4454 567778899999999999999999 99
Q ss_pred EEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEe
Q 015650 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (403)
|++|++.+++....+. +...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+..++|+|+++ ++++
T Consensus 146 v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~--~l~s 223 (321)
T 3ow8_A 146 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVT 223 (321)
T ss_dssp EEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSC--EEEE
T ss_pred EEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCC--EEEE
Confidence 9999999999888887 788999999999999888 489999999999999999999999999999999887 3444
Q ss_pred eCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeC
Q 015650 234 PGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFS 312 (403)
Q Consensus 234 ~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 312 (403)
++.|+.|++||++... ...+.+|...|.+++|+|++++|++++.|+. |+|||+.+++++..+.. |...|.+++|+
T Consensus 224 -~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~-v~iwd~~~~~~~~~~~~--h~~~v~~v~~s 299 (321)
T 3ow8_A 224 -ASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFFD--HQDQVWGVKYN 299 (321)
T ss_dssp -ECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECC--CSSCEEEEEEC
T ss_pred -EcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-EEEEeCCCCEEEEEEcC--CCCcEEEEEEC
Confidence 4589999999998854 5567889999999999999999999999999 99999999999999986 77899999999
Q ss_pred CCCCEEEEEeCCCcEEEEEee
Q 015650 313 SNAQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 313 ~d~~~l~s~~~dg~v~iwd~~ 333 (403)
|++++|++++.||.|+|||+.
T Consensus 300 ~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 300 GNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TTSSEEEEEETTCCEEEEECC
T ss_pred CCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999964
No 20
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-37 Score=278.81 Aligned_cols=289 Identities=16% Similarity=0.171 Sum_probs=234.8
Q ss_pred CccccCCCCCCeEEEEEcCC-CCEEEEEc-CCcEEEEEcCCCe---eEEEEecccCcceeEEEEeeeCCeEEEeeCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQD-HGCFAAGT-DHGFRIYNCDPFR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP 151 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d-~~~l~~~~-~~~i~iw~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 151 (403)
...++.+|.+.|++|+|+|+ +++|++|+ |+.|+|||+...+ ......+. +|...|.++.|++++.++++++.|
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~-~h~~~V~~~~~s~dg~~l~s~~~d- 107 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR-GHSHFVSDVVISSDGQFALSGSWD- 107 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC-CCSSCEEEEEECTTSSEEEEEETT-
T ss_pred EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe-CCCCCEEEEEECCCCCEEEEEccc-
Confidence 34578999999999999998 68999998 5559999997543 23345665 789999999999999999999999
Q ss_pred CCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceee-eEeeccCCCceeEEEeeCC
Q 015650 152 QYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLL-HQIETIANPKGLCAVSQGV 226 (403)
Q Consensus 152 ~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~ 226 (403)
+.|++|+........... +...+..+.+++++.+++ .|+.+++||+...... .....|...+..+++++++
T Consensus 108 ----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 108 ----GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS 183 (340)
T ss_dssp ----SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCS
T ss_pred ----ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCC
Confidence 999999999988877777 778889999999888777 4899999998765443 3345678888999999988
Q ss_pred CeEEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCccc
Q 015650 227 GSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAE 305 (403)
Q Consensus 227 ~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~ 305 (403)
...++++ ++.|+.|++||++..+ ...+.+|...|.+++|+|++++|++|+.|+. |++||+.+.+.+..+. +...
T Consensus 184 ~~~~~~s-~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~~---~~~~ 258 (340)
T 4aow_A 184 SNPIIVS-CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ-AMLWDLNEGKHLYTLD---GGDI 258 (340)
T ss_dssp SSCEEEE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEE---CSSC
T ss_pred CCcEEEE-EcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe-EEEEEeccCceeeeec---CCce
Confidence 7766665 4489999999999865 4567789999999999999999999999999 9999999999998888 4468
Q ss_pred EEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceE
Q 015650 306 IYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYI 385 (403)
Q Consensus 306 v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (403)
|.++.|+|++.++ +++.|+.|++||++++.....+. ..........|...|++
T Consensus 259 v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~--------------------------~~~~~~~~~~h~~~v~~ 311 (340)
T 4aow_A 259 INALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELK--------------------------QEVISTSSKAEPPQCTS 311 (340)
T ss_dssp EEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEEC--------------------------CC-------CCCCCEEE
T ss_pred EEeeecCCCCcee-eccCCCEEEEEECCCCeEEEecc--------------------------ccceeeeccCCCCCEEE
Confidence 9999999987655 55679999999998765321111 11112234567788999
Q ss_pred EEeccCCCEEEEEccCCC
Q 015650 386 VAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 386 ~~fs~d~~~l~~~~~dG~ 403 (403)
++|+|||++|++|+.||+
T Consensus 312 l~~s~dg~~l~sgs~Dg~ 329 (340)
T 4aow_A 312 LAWSADGQTLFAGYTDNL 329 (340)
T ss_dssp EEECTTSSEEEEEETTSC
T ss_pred EEECCCCCEEEEEeCCCE
Confidence 999999999999999985
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-37 Score=300.28 Aligned_cols=306 Identities=12% Similarity=0.143 Sum_probs=237.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEE
Q 015650 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (403)
Q Consensus 83 ~~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd 162 (403)
.+.+.+.+++|+|||++|+++.++.|+||++.+.+.. ..+. +|...|.+++|+|++.++++++.| ++|+|||
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~--~~~~-~h~~~v~~~~~spdg~~lasg~~d-----~~v~lWd 87 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDT--EIYT-EHSHQTTVAKTSPSGYYCASGDVH-----GNVRIWD 87 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCC--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----SEEEEEE
T ss_pred cccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccC--eEec-CCCCceEEEEECCCCcEEEEEeCC-----CCEEEeE
Confidence 3466778899999999999999888999999766554 4565 799999999999999999999999 9999999
Q ss_pred CCCCc--eeEEEe-cCCceeEEEEecCceEEEe--c-----CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEE
Q 015650 163 DHQSR--CIGELS-FRSEVRSVKLRRDRIIVVL--E-----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (403)
Q Consensus 163 ~~~~~--~~~~~~-~~~~i~~~~~~~~~~~~~~--d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (403)
+.+++ ....+. |...|.+++|+|++..++. + +.|++|| .++....+.+|...+..++|+|++... ++
T Consensus 88 ~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~-l~ 164 (611)
T 1nr0_A 88 TTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFR-II 164 (611)
T ss_dssp SSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCE-EE
T ss_pred CCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeE-EE
Confidence 97654 344556 8999999999999998872 2 3677777 566777888999999999999987643 33
Q ss_pred eeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecC-----CCcccE
Q 015650 233 CPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG-----ADRAEI 306 (403)
Q Consensus 233 ~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~-----~~~~~v 306 (403)
+ ++.|+.|++||....+ ...+.+|...|.+++|+|+|++|++++.|+. |+|||+.+++++..+... .|...|
T Consensus 165 s-~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~-i~lwd~~~g~~~~~~~~~~~~~~~h~~~V 242 (611)
T 1nr0_A 165 S-GSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT-IVLYNGVDGTKTGVFEDDSLKNVAHSGSV 242 (611)
T ss_dssp E-EETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCEEEECBCTTSSSCSSSSCE
T ss_pred E-EeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCc-EEEEECCCCcEeeeeccccccccccCCCE
Confidence 3 4589999999988744 4567899999999999999999999999999 999999999998887421 378899
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCC----CCccccccccc----ccccceee--eeeeeEEE
Q 015650 307 YSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDP----TLPTSSLSFIK----GVLPKYFS--SEWSVAQF 376 (403)
Q Consensus 307 ~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~--~~~~~~~~ 376 (403)
.+++|+|||++|++++.|++|++||+++++....+........ .... +..++. +.+ ..+. .......+
T Consensus 243 ~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d~~i-~~~~~~~~~~~~~~ 320 (611)
T 1nr0_A 243 FGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT-KQALVSISANGFI-NFVNPELGSIDQVR 320 (611)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC-SSCEEEEETTCCE-EEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEc-CCEEEEEeCCCcE-EEEeCCCCCcceEE
Confidence 9999999999999999999999999998775443321100000 0000 000000 000 0000 01122345
Q ss_pred EEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 377 RLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 377 ~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
.+|.+.|++++|+|||++|++++.||+
T Consensus 321 ~gh~~~v~~l~~spdg~~l~s~s~D~~ 347 (611)
T 1nr0_A 321 YGHNKAITALSSSADGKTLFSADAEGH 347 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cCCCCCEEEEEEeCCCCEEEEEeCCCc
Confidence 678889999999999999999999985
No 22
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.9e-37 Score=272.40 Aligned_cols=274 Identities=12% Similarity=0.147 Sum_probs=232.9
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeE---EEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCce
Q 015650 81 SSSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREI---FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (403)
..+|...|++++|+|++++|++++++.|++|++.+.+.. ...... .|...+.++.|++++..+++++.+ +.
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-----~~ 120 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCL-NRDNYIRSCKLLPDGCTLIVGGEA-----ST 120 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECS-CTTSBEEEEEECTTSSEEEEEESS-----SE
T ss_pred eccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeeccccc-CCCCcEEEEEEcCCCCEEEEEcCC-----Cc
Confidence 447999999999999999999999766999999765422 112221 578899999999999999998888 99
Q ss_pred EEEEECCCCc--eeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEE
Q 015650 158 VMIWDDHQSR--CIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (403)
Q Consensus 158 i~iwd~~~~~--~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (403)
|++||+.+++ ....+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+..++++++++.++
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~- 199 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLW- 199 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEE-
Confidence 9999999887 445555 788999999999998777 489999999999999999998999999999999887443
Q ss_pred EeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEe
Q 015650 232 VCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAF 311 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 311 (403)
+ ++.|+.|++||++.+.......+...+.+++|+|++++|++++.++. |++||+.+++.. .+.. |...|.+++|
T Consensus 200 -~-~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-i~~~~~~~~~~~-~~~~--~~~~v~~~~~ 273 (337)
T 1gxr_A 200 -T-GGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSN-VEVLHVNKPDKY-QLHL--HESCVLSLKF 273 (337)
T ss_dssp -E-EETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSC-EEEEETTSSCEE-EECC--CSSCEEEEEE
T ss_pred -E-EecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCc-EEEEECCCCCeE-EEcC--CccceeEEEE
Confidence 3 34899999999999877766778899999999999999999999999 999999988765 3433 7789999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccC
Q 015650 312 SSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQ 391 (403)
Q Consensus 312 s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d 391 (403)
+|++++|++++.||.|++||+.+++. . ....+...+..++|+|+
T Consensus 274 ~~~~~~l~~~~~dg~i~~~~~~~~~~-----------------------------------~-~~~~~~~~v~~~~~s~~ 317 (337)
T 1gxr_A 274 AYCGKWFVSTGKDNLLNAWRTPYGAS-----------------------------------I-FQSKESSSVLSCDISVD 317 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCE-----------------------------------E-EEEECSSCEEEEEECTT
T ss_pred CCCCCEEEEecCCCcEEEEECCCCeE-----------------------------------E-EEecCCCcEEEEEECCC
Confidence 99999999999999999999998773 1 12345778999999999
Q ss_pred CCEEEEEccCCC
Q 015650 392 KNTVVILGMDGR 403 (403)
Q Consensus 392 ~~~l~~~~~dG~ 403 (403)
+++|++++.||+
T Consensus 318 ~~~l~~~~~dg~ 329 (337)
T 1gxr_A 318 DKYIVTGSGDKK 329 (337)
T ss_dssp SCEEEEEETTSC
T ss_pred CCEEEEecCCCe
Confidence 999999999985
No 23
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=278.01 Aligned_cols=243 Identities=13% Similarity=0.122 Sum_probs=199.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEE--EecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFR--RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
..|...|.+++|+|++.+++.+.|+.|+|||+++++.... ..+. +|...|.+++|++++..+++++.| +.|+
T Consensus 79 ~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~-~H~~~V~~v~~spdg~~l~sgs~d-----~~i~ 152 (344)
T 4gqb_B 79 VQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKY-EHDDIVSTVSVLSSGTQAVSGSKD-----ICIK 152 (344)
T ss_dssp EEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEE-CCSSCEEEEEECTTSSEEEEEETT-----SCEE
T ss_pred eccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeecccc-CCCCCEEEEEECCCCCEEEEEeCC-----CeEE
Confidence 3466789999999997555444466699999988765432 2333 689999999999999999999999 9999
Q ss_pred EEECCCCceeEEEe-cCCceeEEEEecCce-EEE---ecCeEEEEEcCCceeeeEeec--cCCCceeEEEeeCCCeEEEE
Q 015650 160 IWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQIET--IANPKGLCAVSQGVGSLVLV 232 (403)
Q Consensus 160 iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 232 (403)
+||+.+++++..+. |...|.+++|++++. +++ .|++|++||+++++....+.. +...+..+++++++..++ +
T Consensus 153 iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l-~ 231 (344)
T 4gqb_B 153 VWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVF-V 231 (344)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEE-E
T ss_pred EEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcce-E
Confidence 99999999999998 999999999999874 444 489999999999988877643 444577888888766543 3
Q ss_pred eeCCccCeEEEEEccCC-ceeEEeecCCceEEEEEcCCC-CEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEE
Q 015650 233 CPGLQKGQVRVEHYASK-RTKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLA 310 (403)
Q Consensus 233 ~~g~~d~~i~v~d~~~~-~~~~~~~~~~~i~~~~~sp~g-~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 310 (403)
+ |+.|+.|++||++++ .+..+.+|...|++++|+|++ ++|++|+.|++ |+|||+.+++++. +.+ |...|++++
T Consensus 232 s-g~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-i~vwd~~~~~~~~-~~~--H~~~V~~v~ 306 (344)
T 4gqb_B 232 F-GDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-LAVLDSSLSELFR-SQA--HRDFVRDAT 306 (344)
T ss_dssp E-EETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTCCEEEE-ECC--CSSCEEEEE
T ss_pred E-eccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCcEEE-EcC--CCCCEEEEE
Confidence 3 458999999999874 467788999999999999998 57999999999 9999999888754 443 889999999
Q ss_pred eCCCCC-EEEEEeCCCcEEEEEeecCC
Q 015650 311 FSSNAQ-WLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 311 ~s~d~~-~l~s~~~dg~v~iwd~~~~~ 336 (403)
|+|+++ +|++++.||+|++|++.+..
T Consensus 307 ~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 307 WSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999986 57799999999999998764
No 24
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-37 Score=286.20 Aligned_cols=244 Identities=16% Similarity=0.282 Sum_probs=217.5
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
...+.+|.+.|++++|+|++++|++|+ |+.|+|||+.+.+.. ..+. +|...|.++.|++++..+++++.| +
T Consensus 143 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~--~~~~-~h~~~V~~v~~~p~~~~l~s~s~D-----~ 214 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI--RTMH-GHDHNVSSVSIMPNGDHIVSASRD-----K 214 (410)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE--ECCC-CCSSCEEEEEECSSSSEEEEEETT-----S
T ss_pred EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--EEEc-CCCCCEEEEEEeCCCCEEEEEeCC-----C
Confidence 356788999999999999999999998 455999999877655 6676 788999999999999999999999 9
Q ss_pred eEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCC-----
Q 015650 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG----- 227 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 227 (403)
.|++||+.+++++..+. |...|.++.+++++.+++ .|++|++||++++++...+..|...+.+++|+|++.
T Consensus 215 ~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 294 (410)
T 1vyh_C 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSIS 294 (410)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred eEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchh
Confidence 99999999999999998 899999999999999888 489999999999999999999999999999998642
Q ss_pred -------------eEEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 015650 228 -------------SLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (403)
Q Consensus 228 -------------~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~ 293 (403)
..++++ |+.|+.|++||++++. +..+.+|...|.+++|+|+|++|++|+.|+. |++||+.++++
T Consensus 295 ~~~~~~~~~~~~~g~~l~s-gs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~-i~vwd~~~~~~ 372 (410)
T 1vyh_C 295 EATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT-LRVWDYKNKRC 372 (410)
T ss_dssp GCCSCC-------CCEEEE-EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTE-EEEECCTTSCC
T ss_pred hhccccccccCCCCCEEEE-EeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCce
Confidence 224554 4589999999998854 5667889999999999999999999999999 99999999999
Q ss_pred EEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEee
Q 015650 294 LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 294 ~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~ 333 (403)
+..+.. |...|++++|+|++.+|++|+.||+|+||+++
T Consensus 373 ~~~~~~--h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 373 MKTLNA--HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CEEEEC--CSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEEcC--CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999886 77899999999999999999999999999864
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-37 Score=279.77 Aligned_cols=246 Identities=15% Similarity=0.198 Sum_probs=199.2
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecc-cCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 81 SSSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
..+|...|++++|+|++++|+++.++.|+|||+.+++......+. .+|...|.+++|++++..+++++.| +.|+
T Consensus 90 ~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~ 164 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVK 164 (357)
T ss_dssp EEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEE
T ss_pred cCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-----CeEE
Confidence 456888999999999999888777888999999876544222211 2688899999999999999999999 9999
Q ss_pred EEECCCCceeEEEe-cCCceeEEEEecCce-EEE---ecCeEEEEEcCCceeeeEee--ccCCCceeEEEeeCCCeEEEE
Q 015650 160 IWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQIE--TIANPKGLCAVSQGVGSLVLV 232 (403)
Q Consensus 160 iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 232 (403)
+||+.+++.+..+. |...|.+++|++++. +++ .|++|++||+++++.+..+. .+...+..++|+|++..++ +
T Consensus 165 iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l-a 243 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTF-A 243 (357)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEE-E
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceE-E
Confidence 99999999999998 999999999999864 333 48999999999988776554 3455678899999876543 3
Q ss_pred eeCCccCeEEEEEccCC-ceeEEeecCCceEEEEEcCCC-CEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEE
Q 015650 233 CPGLQKGQVRVEHYASK-RTKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLA 310 (403)
Q Consensus 233 ~~g~~d~~i~v~d~~~~-~~~~~~~~~~~i~~~~~sp~g-~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 310 (403)
+ |+.|+.|++||+++. ....+..|...|.+++|+|++ ++|++|+.|++ |+|||+++++++..+. |...|++|+
T Consensus 244 ~-g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-i~iwd~~~~~~~~~~~---H~~~V~~va 318 (357)
T 4g56_B 244 C-GDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-VAVLDADFSEVFRDLS---HRDFVTGVA 318 (357)
T ss_dssp E-EESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTSCEEEEECC---CSSCEEEEE
T ss_pred E-eecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-EEEEECCCCcEeEECC---CCCCEEEEE
Confidence 3 458999999999884 456788999999999999987 57999999999 9999999998887653 889999999
Q ss_pred eCC-CCCEEEEEeCCCcEEEEEeecCCC
Q 015650 311 FSS-NAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 311 ~s~-d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
|+| |+++|++++.||+|++|++.+...
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 998 899999999999999999987654
No 26
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.1e-37 Score=274.99 Aligned_cols=298 Identities=10% Similarity=0.137 Sum_probs=231.2
Q ss_pred cccCCCCCCeEEEEEcCCCCEE-EEEc----CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCC---eEEEeeCCCC
Q 015650 79 STSSSPPPTLLHISFNQDHGCF-AAGT----DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN---ILALVGGGPD 150 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l-~~~~----~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~s~~~d 150 (403)
.++.+|...|.+++|+|++..+ ++|+ |+.|+||++.+++......+ +|...|.++.|+++ +..+++++.|
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI--EKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE--EESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee--cccCcEEEEEEcCCCCCCceEEEecCC
Confidence 4567799999999999999655 5554 34499999998776544444 48889999999998 5888888888
Q ss_pred CCCCCceEEEEECCCCc-eeEEEe-cCCceeEEEE------ecCceEEE---ecCeEEEEEcCCce-eeeEeeccCC---
Q 015650 151 PQYPLNKVMIWDDHQSR-CIGELS-FRSEVRSVKL------RRDRIIVV---LEQKIFVYNFADLK-LLHQIETIAN--- 215 (403)
Q Consensus 151 ~~~~~~~i~iwd~~~~~-~~~~~~-~~~~i~~~~~------~~~~~~~~---~d~~i~i~d~~~~~-~~~~~~~~~~--- 215 (403)
|.|++||+.+++ .+..+. |...|.++.| ++++.+++ .|+.|++||+++++ .+..+..+..
T Consensus 90 -----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 164 (357)
T 3i2n_A 90 -----GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENK 164 (357)
T ss_dssp -----SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCC
T ss_pred -----CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCC
Confidence 999999999988 788887 9999999955 67887777 48999999999876 6777765544
Q ss_pred -CceeEE----EeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcC---CCCEEEEEeCCCcEEEEEE
Q 015650 216 -PKGLCA----VSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQ---DGQLLATSSTKGTLVRIFN 287 (403)
Q Consensus 216 -~~~~~~----~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp---~g~~l~s~~~dg~~i~iwd 287 (403)
.+..++ ++++++ ++++ ++.|+.|++||++.........|...|.+++|+| ++.+|++++.||. |++||
T Consensus 165 ~~v~~~~~~~~~~~~~~--~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~-i~i~d 240 (357)
T 3i2n_A 165 RDCWTVAFGNAYNQEER--VVCA-GYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK-FHVFD 240 (357)
T ss_dssp CCEEEEEEECCCC-CCC--EEEE-EETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE-EEEEE
T ss_pred CceEEEEEEeccCCCCC--EEEE-EccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe-EEEEe
Confidence 566666 456665 3443 3478999999999988888888999999999999 9999999999999 99999
Q ss_pred cCCCcEEEEEe---cCCCcccEEEEEeCCCCC-EEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccc
Q 015650 288 TLDGTLLQEVR---RGADRAEIYSLAFSSNAQ-WLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVL 363 (403)
Q Consensus 288 ~~~~~~~~~~~---~~~~~~~v~~l~~s~d~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (403)
+++++.+..+. ...|...|++++|+|+++ +|++++.||.|++||++++.............
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~--------------- 305 (357)
T 3i2n_A 241 MRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEM--------------- 305 (357)
T ss_dssp EEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCC---------------
T ss_pred CcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcc---------------
Confidence 98765543332 112778999999999999 89999999999999999887543222111000
Q ss_pred cceeeeeeeeEEEEEeCCCceEEEeccCCCEEE-EEccCCC
Q 015650 364 PKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVV-ILGMDGR 403 (403)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~-~~~~dG~ 403 (403)
........+..+..|.+.|+.++|+|++++|+ +++.||+
T Consensus 306 -~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~ 345 (357)
T 3i2n_A 306 -GVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQT 345 (357)
T ss_dssp -CCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSE
T ss_pred -ccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCc
Confidence 00001122455778889999999999999998 7998874
No 27
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-36 Score=297.87 Aligned_cols=297 Identities=16% Similarity=0.183 Sum_probs=230.0
Q ss_pred cccCCCCCCeEEEEEcCCC-CEEEEEc-CCcEEEEEcCCCe---eEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCC
Q 015650 79 STSSSPPPTLLHISFNQDH-GCFAAGT-DHGFRIYNCDPFR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~-~~l~~~~-~~~i~iw~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~ 153 (403)
..+.+|.+.|++|+|+|++ .+|++|+ |+.|+||++.... ......+. +|...|.++.|++++..+++++.|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~-~h~~~v~~v~~s~~g~~l~sgs~D--- 451 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT-GHSHFVEDVVLSSDGQFALSGSWD--- 451 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE-CCSSCEEEEEECTTSSEEEEEETT---
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceec-CCCCcEEEEEECCCCCEEEEEeCC---
Confidence 4578999999999999875 7899988 5559999986532 22335565 799999999999999999999999
Q ss_pred CCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEe---eccCCCceeEEEeeCC
Q 015650 154 PLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQI---ETIANPKGLCAVSQGV 226 (403)
Q Consensus 154 ~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~~ 226 (403)
+.|+|||+.+++.+..+. |...|.+++|+|++.+++ .|++|++||+......... ..|...+.+++|++++
T Consensus 452 --g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 452 --GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp --SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred --CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 999999999999999888 999999999999998877 4999999998654333222 3567788999999987
Q ss_pred CeEEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCccc
Q 015650 227 GSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAE 305 (403)
Q Consensus 227 ~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~ 305 (403)
...++++ ++.|+.|++||++... ...+.+|...|.+++|+|+|++|++|+.|+. |+|||+.+++++..+. +...
T Consensus 530 ~~~~l~s-~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~-i~iwd~~~~~~~~~~~---~~~~ 604 (694)
T 3dm0_A 530 LQPTIVS-ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWDLAEGKKLYSLE---ANSV 604 (694)
T ss_dssp SSCEEEE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB-CEEEETTTTEEEECCB---CSSC
T ss_pred CcceEEE-EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe-EEEEECCCCceEEEec---CCCc
Confidence 5545554 4589999999999855 4567889999999999999999999999999 9999999999888776 4468
Q ss_pred EEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceE
Q 015650 306 IYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYI 385 (403)
Q Consensus 306 v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (403)
|.+++|+|++.+|++++ ++.|+|||+++++....+..+.......... .. ......+.-.++.
T Consensus 605 v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~~~~~~~ 667 (694)
T 3dm0_A 605 IHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADN--------------SG--PAATKRKVIYCTS 667 (694)
T ss_dssp EEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC--------------------------------CCCCEEE
T ss_pred EEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccc--------------cc--cccCCceeEEeee
Confidence 99999999999888776 5569999999887533222110000000000 00 0000111124678
Q ss_pred EEeccCCCEEEEEccCCC
Q 015650 386 VAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 386 ~~fs~d~~~l~~~~~dG~ 403 (403)
++|+|||++|++|+.||+
T Consensus 668 l~~spdg~~l~sgs~Dg~ 685 (694)
T 3dm0_A 668 LNWSADGSTLFSGYTDGV 685 (694)
T ss_dssp EEECTTSSEEEEEETTSE
T ss_pred EEEcCCCCEEEEEcCCCe
Confidence 999999999999999984
No 28
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.9e-36 Score=274.42 Aligned_cols=277 Identities=13% Similarity=0.123 Sum_probs=225.1
Q ss_pred ccccCCCCCCeEEEEEcCCC-CEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCC
Q 015650 78 ESTSSSPPPTLLHISFNQDH-GCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYP 154 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~-~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~ 154 (403)
...+.+|...|++++|+|++ ++|++|+. +.|+||++.+.+......+. +|...|.++.|++ ++..+++++.|
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d---- 140 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGM-GPGDAITGMKFNQFNTNQLFVSSIR---- 140 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCC-STTCBEEEEEEETTEEEEEEEEETT----
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecC-CcCCceeEEEeCCCCCCEEEEEeCC----
Confidence 34668899999999999999 89999985 55999999887766544443 6899999999999 77899999998
Q ss_pred CceEEEEECCCCceeEEEe----cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCC
Q 015650 155 LNKVMIWDDHQSRCIGELS----FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG 227 (403)
Q Consensus 155 ~~~i~iwd~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (403)
+.|++||+.. +.+..+. +...|.+++|+|++.+++ .|+.|++||+ +++.+..+..|...+..++|+++++
T Consensus 141 -~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 141 -GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp -TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCT
T ss_pred -CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCC
Confidence 9999999986 5555554 347899999999999888 4899999999 5778888999999999999999987
Q ss_pred eEEEEeeCCccCeEEEEEccC----CceeEEeecCCceEEEEEcC-CCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCC-
Q 015650 228 SLVLVCPGLQKGQVRVEHYAS----KRTKFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA- 301 (403)
Q Consensus 228 ~~~~~~~g~~d~~i~v~d~~~----~~~~~~~~~~~~i~~~~~sp-~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~- 301 (403)
.+++. ++.|+.|++||++. ........|...|.+++|+| ++++|++++.|+. |++||+++++.+..+..+.
T Consensus 218 ~~l~s--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~ 294 (383)
T 3ei3_B 218 WLMAT--SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE-IRVYSSYDWSKPDQIIIHPH 294 (383)
T ss_dssp TEEEE--EETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE-EEEEETTBTTSCSEEEECCB
T ss_pred CEEEE--EeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc-EEEEECCCCccccccccccc
Confidence 54433 35899999999997 45555558999999999999 9999999999999 9999999988776666431
Q ss_pred ----Cc----------ccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCccccccccccccccee
Q 015650 302 ----DR----------AEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYF 367 (403)
Q Consensus 302 ----~~----------~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (403)
|. ..+..++|+|++++ +++.||.|++||+.+++.
T Consensus 295 ~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~------------------------------ 342 (383)
T 3ei3_B 295 RQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL------------------------------ 342 (383)
T ss_dssp CCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE------------------------------
T ss_pred cccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce------------------------------
Confidence 11 34455677777766 777999999999998873
Q ss_pred eeeeeeEEEEE--eCCCceEEEeccCCCEEEEEccCCC
Q 015650 368 SSEWSVAQFRL--VEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 368 ~~~~~~~~~~~--~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+..+.. +.+.+..++|+|++++|++|+ ||+
T Consensus 343 -----~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~ 374 (383)
T 3ei3_B 343 -----VHQLRDPNAAGIISLNKFSPTGDVLASGM-GFN 374 (383)
T ss_dssp -----EEEECBTTBCSCCCEEEECTTSSEEEEEE-TTE
T ss_pred -----eeeecCCCCCceEEEEEEecCccEEEEec-CCc
Confidence 223333 346677789999999999996 763
No 29
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.1e-36 Score=275.41 Aligned_cols=297 Identities=11% Similarity=0.166 Sum_probs=229.2
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCe------eEEEEecccCcceeEEEEeeeCC----e---EE
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFR------EIFRRDFERGGGIGVVEMLFRCN----I---LA 143 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~----~---~~ 143 (403)
...+.+|.+.|++++|+| ++|++|+ |+.|+||++...+ .. ..+. +|...|.++.|+++ + ..
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKS--YSHF-VHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGE--EEEE-CCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcc--eEEe-cCCCcEEEEEEecccccCCccccE
Confidence 356789999999999998 7888887 4559999998776 33 4454 68889999999999 8 89
Q ss_pred EeeCCCCCCCCCceEEEEECCCCce-----eEEEe-c-----CCceeEEEEe----cCceE-EE---ecCeEEEEEcCC-
Q 015650 144 LVGGGPDPQYPLNKVMIWDDHQSRC-----IGELS-F-----RSEVRSVKLR----RDRII-VV---LEQKIFVYNFAD- 203 (403)
Q Consensus 144 ~~s~~~d~~~~~~~i~iwd~~~~~~-----~~~~~-~-----~~~i~~~~~~----~~~~~-~~---~d~~i~i~d~~~- 203 (403)
+++++.| +.|++|++.+++. +..+. | ...|.+++|+ |++.+ ++ .|+.|++||+++
T Consensus 84 l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 84 VATTSFS-----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEEEETT-----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS
T ss_pred EEEEcCC-----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc
Confidence 9999888 9999999998886 77777 6 4899999999 99887 66 489999999998
Q ss_pred -----ceeee-----Eee-------ccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc-eeEEee---c---CC
Q 015650 204 -----LKLLH-----QIE-------TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMA---H---DS 259 (403)
Q Consensus 204 -----~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~---~---~~ 259 (403)
++.+. .+. .+...+..++|++++ ++++ ++.|+.|++||++... ...+.. | ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~ 234 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG---LIAT-GFNNGTVQISELSTLRPLYNFESQHSMINNSN 234 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS---EEEE-ECTTSEEEEEETTTTEEEEEEECCC---CCCC
T ss_pred ccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc---eEEE-EeCCCcEEEEECCCCceeEEEeccccccccCC
Confidence 77666 664 377889999999987 3333 3589999999998754 455667 8 99
Q ss_pred ceEEEEEcCCCCEEEEEeCC---CcEEEEEEcCCCcEEEEEecCC-----------CcccEEEEEeCCCCCEEEEEeCCC
Q 015650 260 RIACFALTQDGQLLATSSTK---GTLVRIFNTLDGTLLQEVRRGA-----------DRAEIYSLAFSSNAQWLAVSSDKG 325 (403)
Q Consensus 260 ~i~~~~~sp~g~~l~s~~~d---g~~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~s~d~~~l~s~~~dg 325 (403)
.|.+++|+|++++|++++.| +. |++||+.+++.+..+.... |...|.+++|+|++++|++++.||
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 313 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGC-ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 313 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEE-EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS
T ss_pred ccceEEECCCCCEEEEEecCCCCce-EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence 99999999999999999999 99 9999999999998887511 568999999999999999999999
Q ss_pred cEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCC----------CEE
Q 015650 326 TVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQK----------NTV 395 (403)
Q Consensus 326 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~----------~~l 395 (403)
.|++||+++++....+...........+ . ... ......+|...++.++|+|++ ++|
T Consensus 314 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~---------~----~~g-~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l 379 (397)
T 1sq9_A 314 KLRFWDVKTKERITTLNMHCDDIEIEED---------I----LAV-DEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESL 379 (397)
T ss_dssp EEEEEETTTTEEEEEEECCGGGCSSGGG---------C----CCB-CTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEE
T ss_pred eEEEEEcCCCceeEEEecccCcccchhh---------h----hcc-ccccccccCCceeEEEeccccccccccccccceE
Confidence 9999999887742221100000000000 0 000 000012237889999999999 799
Q ss_pred EEEccCCC
Q 015650 396 VILGMDGR 403 (403)
Q Consensus 396 ~~~~~dG~ 403 (403)
++++.||+
T Consensus 380 ~s~~~dg~ 387 (397)
T 1sq9_A 380 CCVCLDRS 387 (397)
T ss_dssp EEEETTTE
T ss_pred EEecCCCc
Confidence 99999984
No 30
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-36 Score=276.22 Aligned_cols=289 Identities=16% Similarity=0.223 Sum_probs=232.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEE
Q 015650 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd 162 (403)
|.+.|++++|+|++++|++|+.++ |++|+. +++.. ..+. .|...+.++.|++++..+++++.+ +.|++||
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd 177 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNK-TGALL--NVLN-FHRAPIVSVKWNKDGTHIISMDVE-----NVTILWN 177 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEE--EEEC-CCCSCEEEEEECTTSSEEEEEETT-----CCEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-CCCee--eecc-CCCccEEEEEECCCCCEEEEEecC-----CeEEEEE
Confidence 688999999999999999998555 999993 33333 4554 688999999999999999999888 9999999
Q ss_pred CCCCceeEEEe-cCCc---------------eeEEEEecCceEEE--ecCeEEEEEcCCceeeeEeeccCCCceeEEEee
Q 015650 163 DHQSRCIGELS-FRSE---------------VRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQ 224 (403)
Q Consensus 163 ~~~~~~~~~~~-~~~~---------------i~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 224 (403)
+.+++.+..+. +... +.++.|++++.+++ .++.|++||+++++.+..+..|...+..++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 257 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND 257 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC
Confidence 99999988887 5554 99999999998777 589999999999999989989999999999999
Q ss_pred CCCeEEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCc
Q 015650 225 GVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR 303 (403)
Q Consensus 225 ~~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~ 303 (403)
+++. +++ ++.|+.|++||++.+. ...+..|...|.+++|+|++ +|++++.|+. |++||+.+++.+..+.. |.
T Consensus 258 ~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~~ 330 (425)
T 1r5m_A 258 TNKL--LLS-ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS-VRLWSLKQNTLLALSIV--DG 330 (425)
T ss_dssp TTTE--EEE-EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSE-EEEEETTTTEEEEEEEC--TT
T ss_pred CCCE--EEE-EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCc-EEEEECCCCcEeEeccc--CC
Confidence 9874 333 3479999999998854 55677899999999999999 9999999999 99999999999988885 66
Q ss_pred ccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCC--
Q 015650 304 AEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEG-- 381 (403)
Q Consensus 304 ~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 381 (403)
..|.+++|+|++++|++++.||.|++||+++++........ .. ...+.. .....+..+..+..
T Consensus 331 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~---------~~----~~~~~~--~~~~~~~~~~~~~~~~ 395 (425)
T 1r5m_A 331 VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYG---------NR----DGILNP--LPIPLYASYQSSQDND 395 (425)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC---------------------------C--EECCEEEEECCTTCCC
T ss_pred ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeec---------cc----ccccCc--ccchhhhhhcCcccCC
Confidence 89999999999999999999999999999987632111000 00 000000 00012444666655
Q ss_pred CceEEEeccCCCEEEEEccCCC
Q 015650 382 SPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 382 ~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
.++.++|+|++++|++++.||+
T Consensus 396 ~v~~~~~s~~~~~l~~~~~dg~ 417 (425)
T 1r5m_A 396 YIFDLSWNCAGNKISVAYSLQE 417 (425)
T ss_dssp CEEEEEECTTSSEEEEEESSSC
T ss_pred ceEEEEccCCCceEEEEecCce
Confidence 8999999999999999999985
No 31
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.5e-36 Score=264.97 Aligned_cols=236 Identities=14% Similarity=0.195 Sum_probs=209.2
Q ss_pred EecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEE
Q 015650 122 RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIF 197 (403)
Q Consensus 122 ~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~ 197 (403)
+.+. +|...|.+++|+|++..+++++.| |.|++||+.+++.+..+. |..+|.+++|++++.+++ .|++|+
T Consensus 7 ~~~~-~h~~~V~~~~fsp~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 7 KTFS-NRSDRVKGIDFHPTEPWVLTTLYS-----GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp EEEE-EECSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred Eeec-CCCCceEEEEECCCCCEEEEEcCC-----CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 4565 788999999999999999999999 999999999999999998 889999999999999888 489999
Q ss_pred EEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc--eeEEeecCCceEEEEEcC-CCCEEE
Q 015650 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR--TKFIMAHDSRIACFALTQ-DGQLLA 274 (403)
Q Consensus 198 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~--~~~~~~~~~~i~~~~~sp-~g~~l~ 274 (403)
+||+++++.+..+..|...+..++|+|+++. +++ |+.|+.|++||++.+. ...+.+|...|.+++|+| ++.+|+
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~s-gs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY--VLS-GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSE--EEE-EETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCE--EEE-ECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEE
Confidence 9999999999999999999999999999873 443 4589999999998753 355788999999999999 689999
Q ss_pred EEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCC--CCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCc
Q 015650 275 TSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS--NAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLP 352 (403)
Q Consensus 275 s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~--d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 352 (403)
+|+.|+. |++||+.+++....+..+ +...+..+.|+| ++.+|++++.|++|++||+++++.
T Consensus 158 sgs~D~~-v~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~--------------- 220 (304)
T 2ynn_A 158 SGCLDRT-VKVWSLGQSTPNFTLTTG-QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC--------------- 220 (304)
T ss_dssp EEETTSE-EEEEETTCSSCSEEEECC-CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE---------------
T ss_pred EEeCCCe-EEEEECCCCCccceeccC-CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc---------------
Confidence 9999999 999999888777666653 567899999986 778999999999999999988763
Q ss_pred ccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 353 TSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+..+..|...+..++|+|+++.|++|+.||+
T Consensus 221 --------------------~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~ 251 (304)
T 2ynn_A 221 --------------------VATLEGHMSNVSFAVFHPTLPIIISGSEDGT 251 (304)
T ss_dssp --------------------EEEEECCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred --------------------ceeeCCCCCCEEEEEECCCCCEEEEEcCCCe
Confidence 4457788899999999999999999999985
No 32
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.3e-36 Score=266.54 Aligned_cols=240 Identities=13% Similarity=0.167 Sum_probs=207.7
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCee--EEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFRE--IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
..+..|...|.+++|+|++++|++|+ |+.|++|++.+... .....+. +|...+.++.|.+++. +++++.|
T Consensus 91 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-l~s~s~d----- 163 (340)
T 1got_B 91 HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA-GHTGYLSCCRFLDDNQ-IVTSSGD----- 163 (340)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE-CCSSCEEEEEEEETTE-EEEEETT-----
T ss_pred eEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec-CCCccEEEEEECCCCc-EEEEECC-----
Confidence 45567889999999999999999998 44599999976532 2334555 7888999999998887 5666667
Q ss_pred ceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEE
Q 015650 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (403)
+.|++||+.+++.+..+. |...|.+++|+|++.+++ .|++|++||+++++.+..+..|...+..++|+|+++. +
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~--l 241 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA--F 241 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE--E
T ss_pred CcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE--E
Confidence 999999999999999998 999999999999998887 4899999999999999999999999999999998874 4
Q ss_pred EeeCCccCeEEEEEccCCceeEEeec---CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEE
Q 015650 232 VCPGLQKGQVRVEHYASKRTKFIMAH---DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~~~~~~~~~---~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (403)
++ |+.|+.|++||++.........| ...|.+++|+|+|++|++|+.|+. |++||+.+++.+..+.+ |...|.+
T Consensus 242 ~s-~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~~~~--h~~~v~~ 317 (340)
T 1got_B 242 AT-GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAG--HDNRVSC 317 (340)
T ss_dssp EE-EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--CSSCEEE
T ss_pred EE-EcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe-EEEEEcccCcEeeEeec--CCCcEEE
Confidence 43 45899999999998665443333 347999999999999999999999 99999999999998886 7789999
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEE
Q 015650 309 LAFSSNAQWLAVSSDKGTVHVFN 331 (403)
Q Consensus 309 l~~s~d~~~l~s~~~dg~v~iwd 331 (403)
++|+|+|++|++|+.||.|+|||
T Consensus 318 ~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 318 LGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999996
No 33
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.9e-36 Score=271.53 Aligned_cols=305 Identities=14% Similarity=0.086 Sum_probs=230.5
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 81 SSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
+..|.+.|++++|+|++++|++++ ++.|+||++.+.+......+. +|...+.++.|++++..+++++.| +.|+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~ 77 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTD-----RNAY 77 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEETT-----SCEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEcCC-----CeEE
Confidence 455899999999999999999997 555999999887643446665 788999999999999999999988 9999
Q ss_pred EEECCCCceeEEEe---cCCceeEEEEecCceEEE---ecCeEEEEEcCCcee---eeEe-eccCCCceeEEEeeCCCeE
Q 015650 160 IWDDHQSRCIGELS---FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKL---LHQI-ETIANPKGLCAVSQGVGSL 229 (403)
Q Consensus 160 iwd~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~ 229 (403)
+||+.+++....+. |...|.+++|+|++.+++ .|+.|++||++.++. ...+ ..|...+..++|+++++.
T Consensus 78 vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~- 156 (372)
T 1k8k_C 78 VWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL- 156 (372)
T ss_dssp EEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE-
T ss_pred EEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE-
Confidence 99999887655543 888999999999998887 389999999988653 2333 456788999999998774
Q ss_pred EEEeeCCccCeEEEEEcc------------------C-CceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCC
Q 015650 230 VLVCPGLQKGQVRVEHYA------------------S-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~------------------~-~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~ 290 (403)
+++ ++.|+.|++||++ . .....+..|...|.+++|+|++++|++++.|+. |++||+++
T Consensus 157 -l~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~d~~~ 233 (372)
T 1k8k_C 157 -LAA-GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST-VCLADADK 233 (372)
T ss_dssp -EEE-EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-EEEEEGGG
T ss_pred -EEE-EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE-EEEEECCC
Confidence 343 3479999999964 2 344556789999999999999999999999999 99999999
Q ss_pred CcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeec--CC--CCCCCCCCCCCCCCCcccccccccccccce
Q 015650 291 GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV--NS--GSARSEPRSTSDPTLPTSSLSFIKGVLPKY 366 (403)
Q Consensus 291 ~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (403)
++++..+.. |...|.+++|+|++++|+++ .|+.|++|++.+ ++ ....+.......... ......... +.
T Consensus 234 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~-- 306 (372)
T 1k8k_C 234 KMAVATLAS--ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRG-LTARERFQN-LD-- 306 (372)
T ss_dssp TTEEEEEEC--SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC---------CHHHHHHH-CC--
T ss_pred CceeEEEcc--CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhh-cchhhhhhh-cc--
Confidence 999999985 66799999999999988887 899999999998 42 111111110000000 000000000 00
Q ss_pred eeeeeee------EEE-EEeCCCceEEEec-cCC---CEEEEEccCCC
Q 015650 367 FSSEWSV------AQF-RLVEGSPYIVAFG-HQK---NTVVILGMDGR 403 (403)
Q Consensus 367 ~~~~~~~------~~~-~~~~~~~~~~~fs-~d~---~~l~~~~~dG~ 403 (403)
. ..... ..+ ..|.+.|++++|+ ++| ++|++|+.||+
T Consensus 307 ~-~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~ 353 (372)
T 1k8k_C 307 K-KASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGG 353 (372)
T ss_dssp C-CC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSE
T ss_pred c-ccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCc
Confidence 0 00000 112 3678899999966 677 99999999984
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.1e-35 Score=283.27 Aligned_cols=271 Identities=20% Similarity=0.277 Sum_probs=233.6
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCce
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (403)
..+.+|...|++++|+|++++|++++.+ .|++|+... +.. ..+. +|...+.+++|++++..+++++.| +.
T Consensus 256 ~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-~~~--~~~~-~h~~~v~~~~~~~~~~~l~t~~~d-----~~ 326 (577)
T 2ymu_A 256 QTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-QLL--QTLT-GHSSSVWGVAFSPDGQTIASASDD-----KT 326 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEE--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----SC
T ss_pred EEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-cEE--EEEe-cCCCCeEEEEECCCCCEEEEEeCC-----Ce
Confidence 4577899999999999999999999855 599999753 222 4555 788999999999999999999998 99
Q ss_pred EEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEe
Q 015650 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (403)
|++||.... .+..+. |...|.+++|+|++.+++ .|+.|++||. +++.+..+..|...+..++|+|+++.+ ++
T Consensus 327 i~~w~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l--~~ 402 (577)
T 2ymu_A 327 VKLWNRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI--AS 402 (577)
T ss_dssp EEEEETTSC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCE--EE
T ss_pred EEEEeCCCC-eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEE--EE
Confidence 999997654 455555 899999999999999888 3899999995 678888899999999999999998854 33
Q ss_pred eCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCC
Q 015650 234 PGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (403)
Q Consensus 234 ~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 313 (403)
++.|+.|++||...+....+.+|...|.+++|+|++++|++++.|+. |++||. +++.+..+.. |...|++++|+|
T Consensus 403 -~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-v~~w~~-~~~~~~~~~~--~~~~v~~~~~sp 477 (577)
T 2ymu_A 403 -ASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT-VKLWNR-NGQLLQTLTG--HSSSVRGVAFSP 477 (577)
T ss_dssp -EETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEET-TSCEEEEEEC--CSSCEEEEEECT
T ss_pred -EeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-EEEEEC-CCCEEEEEcC--CCCCEEEEEEcC
Confidence 34899999999887888889999999999999999999999999999 999996 6778888875 778999999999
Q ss_pred CCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCC
Q 015650 314 NAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKN 393 (403)
Q Consensus 314 d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~ 393 (403)
|+++|++++.|+.|++||. +++. +..+..|.+.|+.++|+|||+
T Consensus 478 d~~~las~~~d~~i~iw~~-~~~~-----------------------------------~~~~~~h~~~v~~l~~s~dg~ 521 (577)
T 2ymu_A 478 DGQTIASASDDKTVKLWNR-NGQL-----------------------------------LQTLTGHSSSVRGVAFSPDGQ 521 (577)
T ss_dssp TSCEEEEEETTSEEEEEET-TSCE-----------------------------------EEEEECCSSCEEEEEECTTSS
T ss_pred CCCEEEEEeCCCEEEEEcC-CCCE-----------------------------------EEEEeCCCCCEEEEEEcCCCC
Confidence 9999999999999999995 3331 344678889999999999999
Q ss_pred EEEEEccCCC
Q 015650 394 TVVILGMDGR 403 (403)
Q Consensus 394 ~l~~~~~dG~ 403 (403)
+|++++.||+
T Consensus 522 ~l~s~~~dg~ 531 (577)
T 2ymu_A 522 TIASASDDKT 531 (577)
T ss_dssp CEEEEETTSE
T ss_pred EEEEEECcCE
Confidence 9999999984
No 35
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.8e-36 Score=261.86 Aligned_cols=248 Identities=16% Similarity=0.156 Sum_probs=200.7
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCC--eEEEeeCCCCCCCCCc
Q 015650 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN--ILALVGGGPDPQYPLN 156 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~s~~~d~~~~~~ 156 (403)
++.+|.+.|++++|+|+|++||+|+ |+.|+||++..........+. +|...|.++.|+++ +..+++++.| +
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s~D-----~ 77 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYD-----G 77 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETT-----T
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEcCC-----C
Confidence 4678999999999999999999998 555999999754333335666 79999999999753 7789999999 9
Q ss_pred eEEEEECCCCc--eeEEEe-cCCceeEEEEecC--ceEEE---ecCeEEEEEcCCce--eeeEeeccCCCceeEEEeeCC
Q 015650 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLK--LLHQIETIANPKGLCAVSQGV 226 (403)
Q Consensus 157 ~i~iwd~~~~~--~~~~~~-~~~~i~~~~~~~~--~~~~~---~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~ 226 (403)
+|++||+.+++ .+..+. |...|.+++|+|+ +.+++ .|++|++||++++. ....+..|...+..++|+|+.
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence 99999998874 455565 8899999999997 66666 49999999998753 245667888899999999873
Q ss_pred C-----------eEEEEeeCCccCeEEEEEccCCc-----eeEEeecCCceEEEEEcCCC---CEEEEEeCCCcEEEEEE
Q 015650 227 G-----------SLVLVCPGLQKGQVRVEHYASKR-----TKFIMAHDSRIACFALTQDG---QLLATSSTKGTLVRIFN 287 (403)
Q Consensus 227 ~-----------~~~~~~~g~~d~~i~v~d~~~~~-----~~~~~~~~~~i~~~~~sp~g---~~l~s~~~dg~~i~iwd 287 (403)
. ..++++ |+.|+.|++||++... ...+.+|...|.+++|+|++ .+|++++.|++ |+|||
T Consensus 158 ~~~~~~~~~~~~~~~l~s-gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~-v~iWd 235 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT-CIIWT 235 (297)
T ss_dssp ------------CCEEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEEE
T ss_pred ccccccCCCCCCcceEEE-EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc-EEEEE
Confidence 1 224554 4589999999998743 34677899999999999985 89999999999 99999
Q ss_pred cCCCc---EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecC
Q 015650 288 TLDGT---LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (403)
Q Consensus 288 ~~~~~---~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~ 335 (403)
+.+.. ....+....|...|.+++|+|+|++|++++.||.|+||+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred eCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 97743 2223322336788999999999999999999999999998743
No 36
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.7e-36 Score=271.56 Aligned_cols=281 Identities=14% Similarity=0.200 Sum_probs=228.3
Q ss_pred cccCCCCCCeEEEEEcCC---CC--EEEEEcCCcEEEEEcCCCeeEEEE-ecc-cCcceeEEEEeeeCC----eEEEeeC
Q 015650 79 STSSSPPPTLLHISFNQD---HG--CFAAGTDHGFRIYNCDPFREIFRR-DFE-RGGGIGVVEMLFRCN----ILALVGG 147 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d---~~--~l~~~~~~~i~iw~~~~~~~~~~~-~~~-~~~~~~v~~~~~~~~----~~~~~s~ 147 (403)
....+|...|++++|+|+ +. +++++.++.|+||++.+.+..... ... ..+...+.+++|+++ +..++++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 345689999999999984 33 556666778999999866544221 111 136678999999998 7889999
Q ss_pred CCCCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEec-CceEEE---ecCeEEEEEcCCceeeeEe---eccCCCcee
Q 015650 148 GPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQI---ETIANPKGL 219 (403)
Q Consensus 148 ~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~---~~~~~~~~~ 219 (403)
+.| |.|++||+.+++.+..+. |...|.+++|+| ++.+++ .|+.|++||+++++.+..+ ..|...+..
T Consensus 92 ~~d-----g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 92 GSR-----GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp ETT-----CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred cCC-----CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 988 999999999999999998 999999999999 888777 3899999999999988888 678889999
Q ss_pred EEEeeCCCeEEEEeeCCccCeEEEEEccCCce-----------------------------eEEeecCCceEEEEEcCCC
Q 015650 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-----------------------------KFIMAHDSRIACFALTQDG 270 (403)
Q Consensus 220 ~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~-----------------------------~~~~~~~~~i~~~~~sp~g 270 (403)
++|+++++.+ ++ ++.|+.|++||++.+.. .....|...|.+++|+ +
T Consensus 167 ~~~~~~~~~l--~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 167 ADYDLLGEKI--MS-CGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EEECTTSSEE--EE-EETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred EEECCCCCEE--EE-ecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 9999988743 33 34799999999987432 1223389999999998 7
Q ss_pred CEEEEEeCCCcEEEEEEcCCCcE--------------EEEEecCCCcccEEEEEeCCC--CCEEEEEeCCCcEEEEEeec
Q 015650 271 QLLATSSTKGTLVRIFNTLDGTL--------------LQEVRRGADRAEIYSLAFSSN--AQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 271 ~~l~s~~~dg~~i~iwd~~~~~~--------------~~~~~~~~~~~~v~~l~~s~d--~~~l~s~~~dg~v~iwd~~~ 334 (403)
++|++++.|+. |++||+.+++. +..+.. |...|++++|+|+ +++|++++.||.|++||+++
T Consensus 242 ~~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 242 DLILSKSCENA-IVCWKPGKMEDDIDKIKPSESNVTILGRFDY--SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp TEEEEECSSSE-EEEEEESSTTCCGGGCCTTCCCEEEEEEEEC--SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred CEEEEEecCCE-EEEEeCCCccccccccccCCcchheeccccc--cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 79999999999 99999987643 666664 6688999999999 99999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEe--CCCceEEEeccCCCEEEEEccCCC
Q 015650 335 NSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLV--EGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
++.... ....+..+ ...++.++|+|++++|++++.||+
T Consensus 319 ~~~~~~-------------------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 358 (366)
T 3k26_A 319 EDPHKA-------------------------------KCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDAS 358 (366)
T ss_dssp SSGGGC-------------------------------EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCccc-------------------------------cceEEcccccCCceEEEEeCCCCCeEEEEeCCCE
Confidence 874110 12234555 578999999999999999999984
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=279.48 Aligned_cols=308 Identities=13% Similarity=0.131 Sum_probs=231.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCC--eeEEEEecccCcceeEEEEeeeCC-eEEEeeCCCCCCCCCce
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPF--REIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNK 157 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~~~~~~ 157 (403)
..|...|++++|+|++++|++|+.+ .|++|++... .......+. +|...|.++.|+++ +..+++++.| +.
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d-----g~ 137 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNN-----GE 137 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSS-----SC
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEcCC-----Ce
Confidence 3588899999999999999999854 5999999861 111235565 78899999999998 7889999988 99
Q ss_pred EEEEECCCCc------eeEEE---e-cCCceeEEEEecC-ceEEE---ecCeEEEEEcCCceeeeEeecc------CCCc
Q 015650 158 VMIWDDHQSR------CIGEL---S-FRSEVRSVKLRRD-RIIVV---LEQKIFVYNFADLKLLHQIETI------ANPK 217 (403)
Q Consensus 158 i~iwd~~~~~------~~~~~---~-~~~~i~~~~~~~~-~~~~~---~d~~i~i~d~~~~~~~~~~~~~------~~~~ 217 (403)
|++||+.+++ ....+ . |...|.+++|+|+ +.+++ .|+.|++||+++++.+..+..+ ...+
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v 217 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQL 217 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCE
T ss_pred EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCce
Confidence 9999999886 33333 3 8889999999998 56666 4899999999999998888766 6788
Q ss_pred eeEEEeeCCCeEEEEeeCCccC---eEEEEEccCC--ceeEEe-ecCCceEEEEEcC-CCCEEEEEeCCCcEEEEEEcCC
Q 015650 218 GLCAVSQGVGSLVLVCPGLQKG---QVRVEHYASK--RTKFIM-AHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLD 290 (403)
Q Consensus 218 ~~~~~~~~~~~~~~~~~g~~d~---~i~v~d~~~~--~~~~~~-~~~~~i~~~~~sp-~g~~l~s~~~dg~~i~iwd~~~ 290 (403)
..++|+|++..++++. +.++ .|++||++.. ....+. +|...|.+++|+| ++++|++++.|+. |++||+.+
T Consensus 218 ~~~~~~~~~~~~l~~~--~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-v~~wd~~~ 294 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATA--TGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-VLLWNPES 294 (416)
T ss_dssp EEEEECSSCTTEEEEE--ECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-EEEECSSS
T ss_pred EEEEECCCCCCEEEEE--ECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-EEEeeCCC
Confidence 9999999976554443 4667 9999999984 455666 8999999999999 9999999999999 99999999
Q ss_pred CcEEEEEecCCCcccEEEEEeCCCC-CEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCccccccccc-cc--ccce
Q 015650 291 GTLLQEVRRGADRAEIYSLAFSSNA-QWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIK-GV--LPKY 366 (403)
Q Consensus 291 ~~~~~~~~~~~~~~~v~~l~~s~d~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~ 366 (403)
++++..+.. |...|.+++|+|++ .+|++++.||.|++|++.+.+............ . .....+.. .- ....
T Consensus 295 ~~~~~~~~~--~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~ 369 (416)
T 2pm9_A 295 AEQLSQFPA--RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQ--Q-ESETDFWNNVSREESKE 369 (416)
T ss_dssp CCEEEEEEC--SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------------------------CCS
T ss_pred CccceeecC--CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccc--c-CCccccccccccccccc
Confidence 999999986 67899999999999 899999999999999999887544332100000 0 00000000 00 0000
Q ss_pred eeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 367 FSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
-.....+.....+...+..++|+|||++|++++.||+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~ 406 (416)
T 2pm9_A 370 KPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKG 406 (416)
T ss_dssp CCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSC
T ss_pred ccccccccCCccccCCccceEEeeCCeEEEEeCCCCe
Confidence 0000000001113456778999999999999999985
No 38
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.9e-35 Score=258.44 Aligned_cols=243 Identities=13% Similarity=0.268 Sum_probs=206.5
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCce
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (403)
..+.+|...|.+++|+|++++|++|+ |+.|+|||+.+++.. ..+. +|...|.++.|++++..+++++.| +.
T Consensus 59 ~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~s~D-----~~ 130 (319)
T 3frx_A 59 RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETY--QRFV-GHKSDVMSVDIDKKASMIISGSRD-----KT 130 (319)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEECTTSCEEEEEETT-----SC
T ss_pred eEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCee--EEEc-cCCCcEEEEEEcCCCCEEEEEeCC-----Ce
Confidence 45788999999999999999999998 555999999988765 5565 799999999999999999999999 99
Q ss_pred EEEEECCCCceeEEEe-cCCceeEEEEecCc------eEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCC
Q 015650 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDR------IIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG 227 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~------~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (403)
|++||++ ++.+..+. |...|.++.+.|.. ..++ .|+.|++||+++++....+.+|...+..++++|+++
T Consensus 131 i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~ 209 (319)
T 3frx_A 131 IKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGT 209 (319)
T ss_dssp EEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSS
T ss_pred EEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCC
Confidence 9999986 45566665 89999999999854 3455 499999999999999999999999999999999887
Q ss_pred eEEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecC------C
Q 015650 228 SLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG------A 301 (403)
Q Consensus 228 ~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~------~ 301 (403)
++++ ++.|+.|++||++.++......+...|.+++|+|++.+|++++.+ . +++|++.....+..+... .
T Consensus 210 --~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~-i~v~~~~~~~~~~~~~~~~~~~~~~ 284 (319)
T 3frx_A 210 --LIAS-AGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-G-IKVFSLDPQYLVDDLRPEFAGYSKA 284 (319)
T ss_dssp --EEEE-EETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-E-EEEEEETTEEEEEEECCCCTTCCGG
T ss_pred --EEEE-EeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-C-cEEEEeCcCeeeeccCccccccccC
Confidence 3444 348999999999987765554566789999999999999988765 4 999999988877776532 1
Q ss_pred CcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecC
Q 015650 302 DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (403)
Q Consensus 302 ~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~ 335 (403)
+...+.+++|+|||++|++|+.||.|+|||+.+.
T Consensus 285 ~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 285 AEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp GCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred cCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 3457999999999999999999999999999875
No 39
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-35 Score=269.96 Aligned_cols=274 Identities=17% Similarity=0.214 Sum_probs=226.1
Q ss_pred cCCCCCCeEEEEEcCCCC-EEEEEcCCc-EEEEEc----CCCe------eEEE--Eeccc-----CcceeEEEEeeeCCe
Q 015650 81 SSSPPPTLLHISFNQDHG-CFAAGTDHG-FRIYNC----DPFR------EIFR--RDFER-----GGGIGVVEMLFRCNI 141 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~-~l~~~~~~~-i~iw~~----~~~~------~~~~--~~~~~-----~~~~~v~~~~~~~~~ 141 (403)
...|.+.|++++|+|+++ +|++|+.++ |++|++ .+++ .... ..+.. +|...|.++.|++++
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 345668999999999999 999998544 999999 7666 2211 11211 157799999999999
Q ss_pred EEEeeCCCCCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCC-
Q 015650 142 LALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANP- 216 (403)
Q Consensus 142 ~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~- 216 (403)
.++++++.+ |.|++|| .+++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..+...
T Consensus 121 ~~l~~~~~d-----g~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 194 (425)
T 1r5m_A 121 NSIVTGVEN-----GELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGG 194 (425)
T ss_dssp SEEEEEETT-----SCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----
T ss_pred CEEEEEeCC-----CeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCc
Confidence 999999988 9999999 7788888888 899999999999998777 4899999999999998888777666
Q ss_pred --------------ceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCc
Q 015650 217 --------------KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGT 281 (403)
Q Consensus 217 --------------~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~ 281 (403)
+..+++++++. +++ +..++.|++||++.+. ...+..|...|.+++|+|++++|++++.|+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 270 (425)
T 1r5m_A 195 SSINAENHSGDGSLGVDVEWVDDDK---FVI-PGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT 270 (425)
T ss_dssp -----------CCCBSCCEEEETTE---EEE-ECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred cceeeccccCCcceeeEEEEcCCCE---EEE-EcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCE
Confidence 88889988743 333 3489999999999854 4567789999999999999999999999999
Q ss_pred EEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccc
Q 015650 282 LVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKG 361 (403)
Q Consensus 282 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (403)
|++||+.+++.+..+.. |...|.+++|+|++ +|++++.||.|++||+++++.
T Consensus 271 -i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~------------------------ 322 (425)
T 1r5m_A 271 -LRIWHGGNGNSQNCFYG--HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL------------------------ 322 (425)
T ss_dssp -EEEECSSSBSCSEEECC--CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE------------------------
T ss_pred -EEEEECCCCccceEecC--CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE------------------------
Confidence 99999999998888875 67899999999999 999999999999999988763
Q ss_pred cccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 362 VLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+..+..+...+..++|+|++++|++++.||+
T Consensus 323 -----------~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 353 (425)
T 1r5m_A 323 -----------LALSIVDGVPIFAGRISQDGQKYAVAFMDGQ 353 (425)
T ss_dssp -----------EEEEECTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred -----------eEecccCCccEEEEEEcCCCCEEEEEECCCe
Confidence 3345667789999999999999999999984
No 40
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.7e-35 Score=262.64 Aligned_cols=277 Identities=13% Similarity=0.144 Sum_probs=223.7
Q ss_pred CCccccCCCCCCeEEEEEcCC---CCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCC
Q 015650 76 PAESTSSSPPPTLLHISFNQD---HGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP 151 (403)
Q Consensus 76 ~~~~~~~~~~~~i~~i~~s~d---~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 151 (403)
.....+.+|.+.|++++|+|+ |++|++|+.+ .|+||++.+........+. +|...|.++.|++++..+++++.|
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d- 107 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ-MHTGPVLDVCWSDDGSKVFTASCD- 107 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE-ECSSCEEEEEECTTSSEEEEEETT-
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec-cccCCEEEEEECcCCCEEEEEcCC-
Confidence 344678899999999999999 6999999855 4999999874444435555 688999999999999999999998
Q ss_pred CCCCceEEEEECCCCceeEEEecCCceeEEEE--ecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCC
Q 015650 152 QYPLNKVMIWDDHQSRCIGELSFRSEVRSVKL--RRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGV 226 (403)
Q Consensus 152 ~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (403)
|.|++||+.+++.+....|...|.+++| ++++.+++ .|+.|++||+++++.+..+..+. ...++.+..
T Consensus 108 ----g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~ 180 (368)
T 3mmy_A 108 ----KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE---RCYCADVIY 180 (368)
T ss_dssp ----SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS---CEEEEEEET
T ss_pred ----CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC---CceEEEecC
Confidence 9999999999998887779999999999 88988777 38999999999999888887654 344444555
Q ss_pred CeEEEEeeCCccCeEEEEEccCCceeEE---eecCCceEEEEEcCCCCE----EEEEeCCCcEEEEEEcCCC---cEEEE
Q 015650 227 GSLVLVCPGLQKGQVRVEHYASKRTKFI---MAHDSRIACFALTQDGQL----LATSSTKGTLVRIFNTLDG---TLLQE 296 (403)
Q Consensus 227 ~~~~~~~~g~~d~~i~v~d~~~~~~~~~---~~~~~~i~~~~~sp~g~~----l~s~~~dg~~i~iwd~~~~---~~~~~ 296 (403)
+.++++ ..++.+++|+++....... ..+...+.++.+.++... +++++.|+. |++||+... +.+..
T Consensus 181 ~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 181 PMAVVA---TAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR-VAIHYINPPNPAKDNFT 256 (368)
T ss_dssp TEEEEE---EGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE-EEEEESSCSCHHHHSEE
T ss_pred CeeEEE---eCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc-EEEEecCCCCcccccee
Confidence 544443 3689999999988543322 234456677777666554 999999999 999999887 55666
Q ss_pred EecCCCcc------------cEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCccccccccccccc
Q 015650 297 VRRGADRA------------EIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLP 364 (403)
Q Consensus 297 ~~~~~~~~------------~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (403)
+.. |.. .|++++|+|++++|++++.||.|++||+++++.
T Consensus 257 ~~~--~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~--------------------------- 307 (368)
T 3mmy_A 257 FKC--HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK--------------------------- 307 (368)
T ss_dssp EEC--SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE---------------------------
T ss_pred eee--eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE---------------------------
Confidence 665 333 699999999999999999999999999998763
Q ss_pred ceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 365 KYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
+..+..|.+.+..++|+|||++|++++.||
T Consensus 308 --------~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 308 --------LKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp --------EEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred --------EEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 333556678999999999999999999987
No 41
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-34 Score=263.78 Aligned_cols=239 Identities=18% Similarity=0.245 Sum_probs=206.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEE
Q 015650 84 PPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd 162 (403)
+...|.+++|+|+|++|++|+. +.|+|||+.+.+.. ..+. +|...|.++.|++++..+++++.| +.|++||
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~--~~~~-~h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd 193 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIV--MILQ-GHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWD 193 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----SEEEEEE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE--EEEc-cCCCCEEEEEEcCCCCEEEEecCC-----CcEEEEE
Confidence 3345999999999999999985 45999999887655 5565 789999999999999999999999 9999999
Q ss_pred CCCCceeEEEecCCceeEEEEec-CceEEE---ecCeEEEEEcCCceeeeEe-------eccCCCceeEEEeeCCCeEEE
Q 015650 163 DHQSRCIGELSFRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQI-------ETIANPKGLCAVSQGVGSLVL 231 (403)
Q Consensus 163 ~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 231 (403)
+.+++....+.+...+.+++|+| ++.+++ .|+.|++||+++++.+..+ .+|...+..++|+++++. +
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~--l 271 (393)
T 1erj_A 194 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS--V 271 (393)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE--E
T ss_pred CCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE--E
Confidence 99999988888888999999999 888877 4899999999998877766 467788999999999874 3
Q ss_pred EeeCCccCeEEEEEccCC-------------ceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 232 VCPGLQKGQVRVEHYASK-------------RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~-------------~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
++ |+.|+.|++||++.. ....+.+|...|.+++|+|++.+|++|+.|+. |++||+.+++++..+.
T Consensus 272 ~s-~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 272 VS-GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp EE-EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-EEEEETTTCCEEEEEE
T ss_pred EE-EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe-EEEEECCCCeEEEEEC
Confidence 43 458999999998752 23456789999999999999999999999999 9999999999999888
Q ss_pred cCCCcccEEEEEeCC------CCCEEEEEeCCCcEEEEEeecCC
Q 015650 299 RGADRAEIYSLAFSS------NAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 299 ~~~~~~~v~~l~~s~------d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
+ |...|.+++|++ ++.+|++|+.||+|+||++...+
T Consensus 350 ~--h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 350 G--HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp C--CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred C--CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence 6 778999999886 68899999999999999998754
No 42
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-34 Score=253.46 Aligned_cols=271 Identities=14% Similarity=0.141 Sum_probs=223.1
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
....+.+|.+.|++++| +++++|++|+.++ |++|++.+.... ..+. .|...+.++.|++++..+++++.+
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~d----- 80 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLG--TVVY-TGQGFLNSVCYDSEKELLLFGGKD----- 80 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEE--EEEE-ECSSCEEEEEEETTTTEEEEEETT-----
T ss_pred HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEE--EEee-cCCccEEEEEECCCCCEEEEecCC-----
Confidence 34668899999999999 9999999998555 999999876654 4444 578899999999999999999998
Q ss_pred ceEEEEECCCC---ceeEEEe-cCCceeEEEEecCceEEE-ecCeEEEEEcCCceeeeEeeccCCCceeEEEee-CCCeE
Q 015650 156 NKVMIWDDHQS---RCIGELS-FRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQ-GVGSL 229 (403)
Q Consensus 156 ~~i~iwd~~~~---~~~~~~~-~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 229 (403)
+.|++|++... +.+..+. |...|.++.|..+..+.+ .|+.|++|| .++.+..+..+...+..+++.+ +++.
T Consensus 81 g~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~- 157 (313)
T 3odt_A 81 TMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK- 157 (313)
T ss_dssp SCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE-
T ss_pred CeEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE-
Confidence 99999998765 5566666 899999999944322222 489999999 6778888888999999999988 5553
Q ss_pred EEEeeCCccCeEEEEEccCCceeEEee-cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEE
Q 015650 230 VLVCPGLQKGQVRVEHYASKRTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~~~~~~~-~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (403)
+ ++ ++.|+.|++||.. .....+.. |...+.+++|+|++. |++++.|+. |++||+++++.+..+.. |...|++
T Consensus 158 l-~~-~~~d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~i~d~~~~~~~~~~~~--~~~~i~~ 230 (313)
T 3odt_A 158 F-LT-ASADKTIKLWQND-KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGL-IKLVDMHTGDVLRTYEG--HESFVYC 230 (313)
T ss_dssp E-EE-EETTSCEEEEETT-EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSE-EEEEETTTCCEEEEEEC--CSSCEEE
T ss_pred E-EE-EECCCCEEEEecC-ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCe-EEEEECCchhhhhhhhc--CCceEEE
Confidence 3 32 3479999999933 34444555 899999999999998 889999999 99999999999999986 6789999
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEe
Q 015650 309 LAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAF 388 (403)
Q Consensus 309 l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 388 (403)
++|+|++ .|++++.||.|++||+++++. ...+..+...+..++|
T Consensus 231 ~~~~~~~-~l~~~~~dg~v~iwd~~~~~~-----------------------------------~~~~~~~~~~i~~~~~ 274 (313)
T 3odt_A 231 IKLLPNG-DIVSCGEDRTVRIWSKENGSL-----------------------------------KQVITLPAISIWSVDC 274 (313)
T ss_dssp EEECTTS-CEEEEETTSEEEEECTTTCCE-----------------------------------EEEEECSSSCEEEEEE
T ss_pred EEEecCC-CEEEEecCCEEEEEECCCCce-----------------------------------eEEEeccCceEEEEEE
Confidence 9999999 588999999999999998873 3346677789999999
Q ss_pred ccCCCEEEEEccCCC
Q 015650 389 GHQKNTVVILGMDGR 403 (403)
Q Consensus 389 s~d~~~l~~~~~dG~ 403 (403)
+|+++ +++++.||+
T Consensus 275 ~~~~~-~~~~~~dg~ 288 (313)
T 3odt_A 275 MSNGD-IIVGSSDNL 288 (313)
T ss_dssp CTTSC-EEEEETTSC
T ss_pred ccCCC-EEEEeCCCc
Confidence 99998 667888874
No 43
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=273.59 Aligned_cols=307 Identities=10% Similarity=0.137 Sum_probs=217.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCee---------EEEEecccCcc------------eeEEEEeeeC
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFRE---------IFRRDFERGGG------------IGVVEMLFRC 139 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~---------~~~~~~~~~~~------------~~v~~~~~~~ 139 (403)
..+.+.|++++|+|+|++||+|+.++ |+||++.+.+. .....+. +|. ..|.++.|++
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEcC
Confidence 34678999999999999999998555 99999986552 1235565 676 7799999999
Q ss_pred Ce--EEEeeCCCCCCCCCceEEEEECCCCcee---------------------------------------EEE-e-cCC
Q 015650 140 NI--LALVGGGPDPQYPLNKVMIWDDHQSRCI---------------------------------------GEL-S-FRS 176 (403)
Q Consensus 140 ~~--~~~~s~~~d~~~~~~~i~iwd~~~~~~~---------------------------------------~~~-~-~~~ 176 (403)
++ ..+++++.| +.|++||+.+++.. ..+ . |..
T Consensus 104 ~~~~~~l~s~s~d-----~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 104 QKNAAQFLLSTND-----KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp CCSSSEEEEEECS-----SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred CCCcceEEEeCCC-----CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 87 677777888 99999998775432 122 2 889
Q ss_pred ceeEEEEecCceEEE--ecCeEEEEEcCC-ceeee-------EeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEc
Q 015650 177 EVRSVKLRRDRIIVV--LEQKIFVYNFAD-LKLLH-------QIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHY 246 (403)
Q Consensus 177 ~i~~~~~~~~~~~~~--~d~~i~i~d~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~ 246 (403)
.|.+++|+|++.+++ .|+.|++||+++ ++.+. .+..|...+..++|+|++..+ +++ |+.|+.|++||+
T Consensus 179 ~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-l~s-~~~dg~i~iwd~ 256 (447)
T 3dw8_B 179 HINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNT-FVY-SSSKGTIRLCDM 256 (447)
T ss_dssp CCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTE-EEE-EETTSCEEEEET
T ss_pred ceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcE-EEE-EeCCCeEEEEEC
Confidence 999999999999888 599999999984 44444 245788889999999998333 333 358999999999
Q ss_pred cCCc-----eeEEeecCC------------ceEEEEEcCCCCEEEEEeCCCcEEEEEEcCC-CcEEEEEecCCCcc----
Q 015650 247 ASKR-----TKFIMAHDS------------RIACFALTQDGQLLATSSTKGTLVRIFNTLD-GTLLQEVRRGADRA---- 304 (403)
Q Consensus 247 ~~~~-----~~~~~~~~~------------~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~-~~~~~~~~~~~~~~---- 304 (403)
+.+. ...+..|.. .|.+++|+|+|++|++++. +. |+|||+++ ++++..+..+....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~-v~iwd~~~~~~~~~~~~~~~~~~~~l~ 334 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS-VKVWDLNMENRPVETYQVHEYLRSKLC 334 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE-EEEEETTCCSSCSCCEESCGGGTTTHH
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce-EEEEeCCCCccccceeecccccccccc
Confidence 9866 467777775 8999999999999999998 98 99999997 88888887531100
Q ss_pred ---------cEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCC-CcccccccccccccceeeeeeeeE
Q 015650 305 ---------EIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPT-LPTSSLSFIKGVLPKYFSSEWSVA 374 (403)
Q Consensus 305 ---------~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 374 (403)
.+..++|+|++++|++++.||.|++||+.+++... +..+...... .......+... .++. .......
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~ 411 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCAS-GKRK-KDEISVD 411 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECS-SCCC-TTCEEGG
T ss_pred ccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCcccccc-CCcc-ccccccc
Confidence 13459999999999999999999999999887532 1111110000 00000000000 0000 0000000
Q ss_pred EEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 375 QFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 375 ~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
.......+..++|+|+++.||+++.++
T Consensus 412 -~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 412 -SLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp -GCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred -ccccCCceeEEEECCCCCEEEEEecce
Confidence 001135688899999999999999876
No 44
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.2e-34 Score=261.45 Aligned_cols=269 Identities=12% Similarity=0.087 Sum_probs=205.8
Q ss_pred CCeEEEEEcCCCCEEEEEcC--------CcEEEEEcCCCee--------EEEEecccCcceeEEEEeeeCCeEEE-----
Q 015650 86 PTLLHISFNQDHGCFAAGTD--------HGFRIYNCDPFRE--------IFRRDFERGGGIGVVEMLFRCNILAL----- 144 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~~--------~~i~iw~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~----- 144 (403)
-+|++++|+|||++|++|+. +.|++|+++.... .....+. .+...+.++.++.+..+.
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~-~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALE-DNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECC-TTSCCCCEEEEETTEEEEECCCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEcc-CCCCceEEEEeCCCEEEEEECCC
Confidence 37999999999999999862 2399999875432 1223454 677778888887765443
Q ss_pred ----eeCCCCCCCCCceEEEEECCCCceeE----EEe------cCCceeEEEEecCceEEE-----ecCeEEEEEcCCce
Q 015650 145 ----VGGGPDPQYPLNKVMIWDDHQSRCIG----ELS------FRSEVRSVKLRRDRIIVV-----LEQKIFVYNFADLK 205 (403)
Q Consensus 145 ----~s~~~d~~~~~~~i~iwd~~~~~~~~----~~~------~~~~i~~~~~~~~~~~~~-----~d~~i~i~d~~~~~ 205 (403)
++++.+ +.+++|++....... ... +...+..++|+|||++++ .|++|++||+++++
T Consensus 94 ~~~l~s~~~d-----~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~ 168 (365)
T 4h5i_A 94 STKITQGKGN-----KHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT 168 (365)
T ss_dssp HHHHHHTSCC-----CCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE
T ss_pred ccEEEEecCC-----CcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc
Confidence 334455 889999987653221 111 234588999999999875 27899999999999
Q ss_pred eeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCcee---EEeecCCceEEEEEcCCCCEEEEEeCCC--
Q 015650 206 LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK---FIMAHDSRIACFALTQDGQLLATSSTKG-- 280 (403)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~---~~~~~~~~i~~~~~sp~g~~l~s~~~dg-- 280 (403)
++..+. +...|..++|+|+++. +++ + .++.+++|+..++... ....|...|.+++|+|+++++++++.|+
T Consensus 169 ~~~~~~-~~~~V~~v~fspdg~~--l~s-~-s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~ 243 (365)
T 4h5i_A 169 EKFEIE-TRGEVKDLHFSTDGKV--VAY-I-TGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK 243 (365)
T ss_dssp EEEEEE-CSSCCCEEEECTTSSE--EEE-E-CSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC
T ss_pred EEEEeC-CCCceEEEEEccCCce--EEe-c-cceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc
Confidence 988885 6678999999999874 343 2 2456777776664432 2346888999999999999999999887
Q ss_pred --cEEEEEEcCCCcE----EEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCccc
Q 015650 281 --TLVRIFNTLDGTL----LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTS 354 (403)
Q Consensus 281 --~~i~iwd~~~~~~----~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 354 (403)
. +++||+..... ...+. .|...|++++|+|||++||+|+.|++|+|||+++++.
T Consensus 244 ~~~-i~~~~~~~~~~~~~~~~~~~--~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~----------------- 303 (365)
T 4h5i_A 244 GIV-LTKISIKSGNTSVLRSKQVT--NRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM----------------- 303 (365)
T ss_dssp CEE-EEEEEEETTEEEEEEEEEEE--SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE-----------------
T ss_pred eeE-Eeecccccceecceeeeeec--CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE-----------------
Confidence 5 88899876643 22344 3678999999999999999999999999999998873
Q ss_pred ccccccccccceeeeeeeeEEE-EEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 355 SLSFIKGVLPKYFSSEWSVAQF-RLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+..+ ++|.+.|++|+|||||++||+|+.||+
T Consensus 304 ------------------~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 304 ------------------SKIFKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp ------------------EEEETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred ------------------EEEecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 2222 567889999999999999999999985
No 45
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-35 Score=262.89 Aligned_cols=247 Identities=17% Similarity=0.162 Sum_probs=195.8
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC--CeEEEeeCCCCCCCCC
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC--NILALVGGGPDPQYPL 155 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~~~~ 155 (403)
.++.+|.+.|++++|+|+|++||+|+ |+.|+|||+.+++......+. +|...|.+++|++ ++..|++++.|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~-gH~~~V~~v~~~~~~~~~~l~s~s~D----- 80 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR-GHEGPVWQVAWAHPMYGNILASCSYD----- 80 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE-CCSSCEEEEEECCGGGSSCEEEEETT-----
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc-CCCccEEEEEeCCCCCCCEEEEEECC-----
Confidence 45678999999999999999999998 555999999877655556776 8999999999975 37788999998
Q ss_pred ceEEEEECCCCc--eeEEEe-cCCceeEEEEecC--ceEEE---ecCeEEEEEcCCcee---eeEeeccCCCceeEEEee
Q 015650 156 NKVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLKL---LHQIETIANPKGLCAVSQ 224 (403)
Q Consensus 156 ~~i~iwd~~~~~--~~~~~~-~~~~i~~~~~~~~--~~~~~---~d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~ 224 (403)
++|++||+++++ .+..+. |...|.+++|+|+ +.+++ .|++|++||++.+.. ...+..|...+..++|+|
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 160 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP 160 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECC
T ss_pred CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcc
Confidence 999999999874 455565 8999999999997 66666 499999999987532 344567788888999988
Q ss_pred CCC---------------eEEEEeeCCccCeEEEEEccCC----ceeEEeecCCceEEEEEcCCC----CEEEEEeCCCc
Q 015650 225 GVG---------------SLVLVCPGLQKGQVRVEHYASK----RTKFIMAHDSRIACFALTQDG----QLLATSSTKGT 281 (403)
Q Consensus 225 ~~~---------------~~~~~~~g~~d~~i~v~d~~~~----~~~~~~~~~~~i~~~~~sp~g----~~l~s~~~dg~ 281 (403)
+.. ..++++ |+.|+.|++||++.. ....+.+|...|.+++|+|++ .+|++++.|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~l~s-gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~ 239 (316)
T 3bg1_A 161 AVVPGSLIDHPSGQKPNYIKRFAS-GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR 239 (316)
T ss_dssp CCCC------CCSCCCCCCCBEEC-CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE
T ss_pred ccCCccccccccccCccccceEEE-ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCe
Confidence 731 124554 568999999999753 345577899999999999986 89999999999
Q ss_pred EEEEEEcCCC---c-EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecC
Q 015650 282 LVRIFNTLDG---T-LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (403)
Q Consensus 282 ~i~iwd~~~~---~-~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~ 335 (403)
|+|||+.+. + ....+.. |...|.+++|+|++++|++++.||.|+||+....
T Consensus 240 -v~iw~~~~~~~~~~~~~~~~~--~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 240 -VFIWTCDDASSNTWSPKLLHK--FNDVVWHVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp -EEEEECSSTTCCCCBCCEEEE--CSSCEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred -EEEEEccCccccchhhhhhhc--CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 999998762 1 1223333 6689999999999999999999999999998743
No 46
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-35 Score=273.37 Aligned_cols=310 Identities=13% Similarity=0.158 Sum_probs=226.0
Q ss_pred ccCCCCCCeEEEEEcC-CCCEEEEEcCC-cEEEEEcCC---CeeE-EEEecccCcceeEEEEeeeCCeEEEeeCCCCCCC
Q 015650 80 TSSSPPPTLLHISFNQ-DHGCFAAGTDH-GFRIYNCDP---FREI-FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~-d~~~l~~~~~~-~i~iw~~~~---~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~ 153 (403)
...+|.+.|++++|+| ++++|++|+.+ .|+||++.+ .... ....+ +|...|.+++|++++..+++++.|
T Consensus 58 ~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~d--- 132 (437)
T 3gre_A 58 LMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY--DCSSTVTQITMIPNFDAFAVSSKD--- 132 (437)
T ss_dssp ECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE--ECSSCEEEEEECTTSSEEEEEETT---
T ss_pred eccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec--cCCCCEEEEEEeCCCCEEEEEeCC---
Confidence 3388999999999999 99999999855 499999865 3211 11223 378899999999999999999999
Q ss_pred CCceEEEEECC---CCceeEEEe-------------cCCceeEEE--EecCceEEE---ecCeEEEEEcCCceeeeEeec
Q 015650 154 PLNKVMIWDDH---QSRCIGELS-------------FRSEVRSVK--LRRDRIIVV---LEQKIFVYNFADLKLLHQIET 212 (403)
Q Consensus 154 ~~~~i~iwd~~---~~~~~~~~~-------------~~~~i~~~~--~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~ 212 (403)
|.|++||+. +++.+..+. +...+.++. +++++.+++ .|+.|++||+++++.+..+..
T Consensus 133 --g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 133 --GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp --SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred --CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 999999995 555544333 234455555 446777777 489999999999999999987
Q ss_pred --cCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCcee-EEe-ecCCceEEEEEc----CCCCEEEEEeCCCcEEE
Q 015650 213 --IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIM-AHDSRIACFALT----QDGQLLATSSTKGTLVR 284 (403)
Q Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~-~~~-~~~~~i~~~~~s----p~g~~l~s~~~dg~~i~ 284 (403)
|...+..++|+|+++. +++ |+.||.|++||++.+... .+. .|...|.+++|+ |++.+|++++.|+. |+
T Consensus 211 ~~h~~~v~~~~~s~~~~~--l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~-i~ 286 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCV--LIL-GTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF-LT 286 (437)
T ss_dssp CGGGCCEEEEEECTTSCE--EEE-EETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE-EE
T ss_pred CCCCCceEEEEECCCCCE--EEE-EcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc-EE
Confidence 7889999999998764 343 348999999999986654 444 778899999665 46889999999999 99
Q ss_pred EEEcCCCcEEEEEecCC------------------------CcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCC
Q 015650 285 IFNTLDGTLLQEVRRGA------------------------DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (403)
Q Consensus 285 iwd~~~~~~~~~~~~~~------------------------~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~ 340 (403)
+||+++++++..+..+. |...|++++|+ ++++|++++.||.|++||+.+++....
T Consensus 287 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 287 IWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp EEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEE
T ss_pred EEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceE
Confidence 99999999998887532 55679999999 789999999999999999999987655
Q ss_pred CCCCCCCCCCCc----ccccccccccccceeeeeeeeEEEEEeCCCceEEEeccC--CCEEEEEccCCC
Q 015650 341 SEPRSTSDPTLP----TSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQ--KNTVVILGMDGR 403 (403)
Q Consensus 341 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d--~~~l~~~~~dG~ 403 (403)
+.++........ .....++...+.. ...........|.+.|++++|+++ +..|++|+.||+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~ 432 (437)
T 3gre_A 366 VISPSRFSDVFIPTQVTANLTMLLRKMKR--TSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGL 432 (437)
T ss_dssp EECC--CCCEEEEEEEETTEEEEEEECC---------------CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred EecccccCceEEEEEeecceEEEEEeccc--ccccccCcccccccceeeEeeeccCCceEEEEEcCCce
Confidence 543322111000 0000000000000 000011224458889999999998 889999999995
No 47
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.1e-35 Score=264.33 Aligned_cols=273 Identities=14% Similarity=0.075 Sum_probs=222.7
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCee-EEEEecccCcceeEEEEeeeCCeE-EEeeCCCCCCCCCc
Q 015650 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFRE-IFRRDFERGGGIGVVEMLFRCNIL-ALVGGGPDPQYPLN 156 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~~~~~ 156 (403)
+..+|.+.|++++|+|++++|++++ ++.|+||++..... .....+. .|...+.++.|++++. .+++++.+ |
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d-----g 79 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQ-----G 79 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETT-----S
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCC-----C
Confidence 4568999999999999999999988 45599999987661 1112233 5888999999999998 89999888 9
Q ss_pred eEEEEEC-CCCceeEEEe--cCCceeEEEEecCceEEE---ecCeEEEEEcCC---------ceeeeEeeccCCCceeEE
Q 015650 157 KVMIWDD-HQSRCIGELS--FRSEVRSVKLRRDRIIVV---LEQKIFVYNFAD---------LKLLHQIETIANPKGLCA 221 (403)
Q Consensus 157 ~i~iwd~-~~~~~~~~~~--~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~~ 221 (403)
.|++||+ .+++...... |...|.+++|+| +.+++ .|+.|++||+++ ++.+..+. +...+..++
T Consensus 80 ~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 157 (342)
T 1yfq_A 80 EILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMD 157 (342)
T ss_dssp CEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEE
T ss_pred eEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEE
Confidence 9999999 8887655445 889999999999 66666 489999999988 77777666 777888888
Q ss_pred EeeCCCeEEEEeeCCccCeEEEEEccC-Cce---eEEeecCCceEEEEEcC-CCCEEEEEeCCCcEEEEEEcCCC-----
Q 015650 222 VSQGVGSLVLVCPGLQKGQVRVEHYAS-KRT---KFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDG----- 291 (403)
Q Consensus 222 ~~~~~~~~~~~~~g~~d~~i~v~d~~~-~~~---~~~~~~~~~i~~~~~sp-~g~~l~s~~~dg~~i~iwd~~~~----- 291 (403)
++++. +++ ++.++.|++||++. ... .....|...+.+++|+| ++++|++++.||. |++|++...
T Consensus 158 ~~~~~----l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 158 TNSSR----LIV-GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR-VAVEFFDDQGDDYN 231 (342)
T ss_dssp ECSSE----EEE-EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE-EEEEECCTTCCSTT
T ss_pred ecCCc----EEE-EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc-EEEEEEcCCCcccc
Confidence 88764 332 34789999999987 432 24456888999999999 9999999999999 999999876
Q ss_pred -cEEEEEecCC-------CcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccc
Q 015650 292 -TLLQEVRRGA-------DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVL 363 (403)
Q Consensus 292 -~~~~~~~~~~-------~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (403)
+.+..+..+. |...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-------------------------- 285 (342)
T 1yfq_A 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK-------------------------- 285 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE--------------------------
T ss_pred cccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH--------------------------
Confidence 7777787632 134899999999999999999999999999998773
Q ss_pred cceeeeeeeeEEEEEe-CCCceEEEeccCCCEEEEEccCCC
Q 015650 364 PKYFSSEWSVAQFRLV-EGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 364 ~~~~~~~~~~~~~~~~-~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+..+..| .+.+..++ |++++|++++.||+
T Consensus 286 ---------~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 286 ---------IKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp ---------EEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred ---------hhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 2334555 67888888 99999999999984
No 48
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.9e-34 Score=287.57 Aligned_cols=249 Identities=13% Similarity=0.173 Sum_probs=216.1
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
...+.+|.+.|.+++|+|++++|++++.++ |+||++.+++.. ..+. +|...|.++.|++++..+++++.| |
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~--~~~~-~~~~~v~~~~~s~~~~~l~~~~~d-----g 77 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEV--RSIQ-VTETPVRAGKFIARKNWIIVGSDD-----F 77 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEEEGGGTEEEEEETT-----S
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceE--EEEe-cCCCcEEEEEEeCCCCEEEEEeCC-----C
Confidence 456788999999999999999999998555 999999887765 5565 688999999999999999999988 9
Q ss_pred eEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCc-eeeeEeeccCCCceeEEEee-CCCeEE
Q 015650 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADL-KLLHQIETIANPKGLCAVSQ-GVGSLV 230 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~ 230 (403)
.|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||+.++ .....+..|...+..++|+| +++.
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-- 155 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST-- 155 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEE--
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCE--
Confidence 99999999999999998 999999999999998777 3899999999886 67778888999999999999 4442
Q ss_pred EEeeCCccCeEEEEEccCCc-eeEEee-cCCceEEEEEcC--CCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccE
Q 015650 231 LVCPGLQKGQVRVEHYASKR-TKFIMA-HDSRIACFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEI 306 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~~~-~~~~~~-~~~~i~~~~~sp--~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v 306 (403)
+++ ++.|+.|++||++... ...+.. +...+.+++|+| ++.+|++++.||. |++||+.+++.+..+.. |...|
T Consensus 156 l~~-~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~--~~~~v 231 (814)
T 3mkq_A 156 FAS-GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEG--HMSNV 231 (814)
T ss_dssp EEE-EETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE-EEEEETTTTEEEEEEEC--CSSCE
T ss_pred EEE-EeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE-EEEEECCCCcEEEEEcC--CCCCE
Confidence 333 3489999999998744 334444 448899999999 9999999999999 99999999999988886 66899
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCC
Q 015650 307 YSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (403)
Q Consensus 307 ~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~ 340 (403)
.+++|+|++++|++++.||.|++||+.+++....
T Consensus 232 ~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 265 (814)
T 3mkq_A 232 SFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (814)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 9999999999999999999999999998775433
No 49
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-35 Score=274.40 Aligned_cols=277 Identities=12% Similarity=0.090 Sum_probs=215.3
Q ss_pred ccCCCCCCeEEEEEcC-CCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCc
Q 015650 80 TSSSPPPTLLHISFNQ-DHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLN 156 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~-d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~ 156 (403)
...+|...|+||+|+| ++.+||+|+.+ .|+|||+.+.+......+. +|...|.++.|+| ++..|++++.| |
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~-gH~~~V~~l~f~p~~~~~l~s~s~D-----~ 187 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGI-GAGGSITGLKFNPLNTNQFYASSME-----G 187 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCC-SSSCCCCEEEECSSCTTEEEEECSS-----S
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEcc-CCCCCEEEEEEeCCCCCEEEEEeCC-----C
Confidence 3456888999999999 56789999855 5999999877665545565 7999999999997 67889999999 9
Q ss_pred eEEEEECCCCceeEEEe---cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEE
Q 015650 157 KVMIWDDHQSRCIGELS---FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (403)
+|++||++++....... +...+.+++|++++.+++ .|+.|++||++ ++.+..+..|...|..++|+|+++.++
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEE
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEE
Confidence 99999998765433333 344678999999998888 48999999986 466777888999999999999987654
Q ss_pred EEeeCCccCeEEEEEccCCc----eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCc---
Q 015650 231 LVCPGLQKGQVRVEHYASKR----TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR--- 303 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~~~----~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~--- 303 (403)
+. ++.|+.|++||++... .....+|...|.+++|+|+|++|++++.|+. |+|||+.+++....+..+.+.
T Consensus 267 ~s--~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-i~iwd~~~~~~~~~~~~~~~~~~~ 343 (435)
T 4e54_B 267 AT--ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-IRVYSASQWDCPLGLIPHPHRHFQ 343 (435)
T ss_dssp EE--EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-EEEEESSSSSSEEEECCCCCCCCS
T ss_pred EE--ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-EEEEECCCCccceEEecccccccc
Confidence 33 3589999999998733 2334679999999999999999999999999 999999999888777653221
Q ss_pred -ccEEEEEeCCCCCEEEEEe------------CCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeee
Q 015650 304 -AEIYSLAFSSNAQWLAVSS------------DKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSE 370 (403)
Q Consensus 304 -~~v~~l~~s~d~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (403)
..+....|+|++.+++++. .++.|++||+.+++.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~--------------------------------- 390 (435)
T 4e54_B 344 HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM--------------------------------- 390 (435)
T ss_dssp SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE---------------------------------
T ss_pred cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE---------------------------------
Confidence 1234567777777777664 345799999988873
Q ss_pred eeeEEE-EEeCCCceEE-EeccCCCEEEEEccCC
Q 015650 371 WSVAQF-RLVEGSPYIV-AFGHQKNTVVILGMDG 402 (403)
Q Consensus 371 ~~~~~~-~~~~~~~~~~-~fs~d~~~l~~~~~dG 402 (403)
+.++ ..|...|.++ +|+|+|++|++|+ ||
T Consensus 391 --~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~ 421 (435)
T 4e54_B 391 --MCQLYDPESSGISSLNEFNPMGDTLASAM-GY 421 (435)
T ss_dssp --EEEECCSSCCCCCCEEEECTTSSCEEEEC-SS
T ss_pred --EEEEeCCCCCcEEEEEEECCCCCEEEEEc-CC
Confidence 1122 2334566665 7999999999887 54
No 50
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-34 Score=256.24 Aligned_cols=249 Identities=16% Similarity=0.170 Sum_probs=201.2
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceE
Q 015650 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (403)
...+|...|.+++|+|+|++|++|+ |+.|+||++..........+. +|...|.+++|++++..+++++.| +.|
T Consensus 56 ~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~D-----~~v 129 (345)
T 3fm0_A 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSRD-----KSV 129 (345)
T ss_dssp ECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEETT-----SCE
T ss_pred eccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEECC-----CeE
Confidence 3468999999999999999999998 555999999877655556776 799999999999999999999999 999
Q ss_pred EEEECCCCc---eeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCce--eeeEeeccCCCceeEEEeeCCCeE
Q 015650 159 MIWDDHQSR---CIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLK--LLHQIETIANPKGLCAVSQGVGSL 229 (403)
Q Consensus 159 ~iwd~~~~~---~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 229 (403)
++||+.++. .+..+. |...|.+++|+|++.+++ .|++|++||+++++ +...+.+|...+..++|+|+++.
T Consensus 130 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~- 208 (345)
T 3fm0_A 130 WVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR- 208 (345)
T ss_dssp EEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSE-
T ss_pred EEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCE-
Confidence 999998764 344555 889999999999998887 48999999998765 45678889999999999999874
Q ss_pred EEEeeCCccCeEEEEEccCC----------------ceeEEee-cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCc
Q 015650 230 VLVCPGLQKGQVRVEHYASK----------------RTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~----------------~~~~~~~-~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~ 292 (403)
+++ ++.|+.|++||.... .+..+.+ |...|.+++|+|++.+|++++.|+. |++|+...+.
T Consensus 209 -l~s-~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~vw~~~~~~ 285 (345)
T 3fm0_A 209 -LAS-CSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-IRVFQEDPNS 285 (345)
T ss_dssp -EEE-EETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-EEEEEECTTS
T ss_pred -EEE-EeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-EEEEEeCCCC
Confidence 444 458999999997431 1122333 8889999999999999999999999 9999987542
Q ss_pred ----EEEEE---ecCCCcccEEEEEeCCCC-CEEEEEeCCCcEEEEEeecCCCC
Q 015650 293 ----LLQEV---RRGADRAEIYSLAFSSNA-QWLAVSSDKGTVHVFNLKVNSGS 338 (403)
Q Consensus 293 ----~~~~~---~~~~~~~~v~~l~~s~d~-~~l~s~~~dg~v~iwd~~~~~~~ 338 (403)
....+ ....|...|++++|+|++ .+|++|+.||+|++|++.+++..
T Consensus 286 ~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 286 DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp CTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred CcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 11111 112378899999999998 49999999999999999998853
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.5e-34 Score=262.55 Aligned_cols=267 Identities=14% Similarity=0.144 Sum_probs=224.5
Q ss_pred eEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc
Q 015650 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (403)
Q Consensus 88 i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~ 167 (403)
++.|+|+++ .+||+|.|+.|+|||..+++......+. +|...|.+++|++++.++++++.| |.|+|||+.+++
T Consensus 108 ~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~-~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~ 180 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQME-QPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQK 180 (420)
T ss_dssp CBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECC-STTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTE
T ss_pred ceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEec-CCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCc
Confidence 567999975 5899999999999999998876555554 678899999999999999999999 999999999999
Q ss_pred eeEEEe-cCCceeEEEEecCceEEE-ecCeEEEEEcCC-ceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEE
Q 015650 168 CIGELS-FRSEVRSVKLRRDRIIVV-LEQKIFVYNFAD-LKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVE 244 (403)
Q Consensus 168 ~~~~~~-~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~ 244 (403)
.+..+. |...+.++.+++.-.... .|+.+++||... ...+..+..|...+..+.+++++.. +++ +..|+.+++|
T Consensus 181 ~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~--l~s-~~~D~~v~i~ 257 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH--LAS-GGNDNLVNVW 257 (420)
T ss_dssp EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE--EEE-EETTSCEEEE
T ss_pred EEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCe--eee-eeccccceEE
Confidence 999998 899999888865432222 489999999886 4556778889999999999998874 343 3489999999
Q ss_pred EccCCc-----eeEEeecCCceEEEEEcCCCC-EEEE--EeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCC
Q 015650 245 HYASKR-----TKFIMAHDSRIACFALTQDGQ-LLAT--SSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ 316 (403)
Q Consensus 245 d~~~~~-----~~~~~~~~~~i~~~~~sp~g~-~l~s--~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 316 (403)
+...+. ......|...|.+++|+|++. ++++ |+.|+. |+|||+.+++++..+.. ...+.++.|+++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t~~~~~~~~~---~~~v~~~~~~~~~~ 333 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVDA---HSQVCSILWSPHYK 333 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTTTEEEEEEEC---SSCEEEEEEETTTT
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCccccceeecc---ccceeeeeecCCCC
Confidence 998743 456678999999999999654 5554 457999 99999999999998884 46899999999999
Q ss_pred EEEEEe--CCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCE
Q 015650 317 WLAVSS--DKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNT 394 (403)
Q Consensus 317 ~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~ 394 (403)
.|++++ .|+.|+|||+.+++. +..+++|.+.|++++|+|||++
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~-----------------------------------v~~l~gH~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAK-----------------------------------VAELKGHTSRVLSLTMSPDGAT 378 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCE-----------------------------------EEEECCCSSCEEEEEECTTSSC
T ss_pred eEEEEEecCCCEEEEEECCCCcE-----------------------------------EEEEcCCCCCEEEEEEcCCCCE
Confidence 988765 799999999998873 4557888999999999999999
Q ss_pred EEEEccCCC
Q 015650 395 VVILGMDGR 403 (403)
Q Consensus 395 l~~~~~dG~ 403 (403)
|++|+.||+
T Consensus 379 l~S~s~D~t 387 (420)
T 4gga_A 379 VASAAADET 387 (420)
T ss_dssp EEEEETTTE
T ss_pred EEEEecCCe
Confidence 999999985
No 52
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=256.70 Aligned_cols=242 Identities=18% Similarity=0.286 Sum_probs=189.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCC-----eeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPF-----REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 83 ~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
+|...|.+++|+|++++|++|+ |+.|+||++... .......+. +|...|.+++|++++.++++++.| +
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~las~s~D-----~ 129 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE-GHENEVKGVAWSNDGYYLATCSRD-----K 129 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETT-----S
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc-CCCCcEEEEEECCCCCEEEEEeCC-----C
Confidence 4999999999999999999998 555999998532 122335565 799999999999999999999999 9
Q ss_pred eEEEEECCCC----ceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCc--eeeeEeeccCCCceeEEEeeCC
Q 015650 157 KVMIWDDHQS----RCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADL--KLLHQIETIANPKGLCAVSQGV 226 (403)
Q Consensus 157 ~i~iwd~~~~----~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~ 226 (403)
.|++||+... +++..+. |...|.+++|+|++.+++ .|++|++||+.++ +++..+.+|...+..++|++++
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 209 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTE 209 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSS
T ss_pred EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCC
Confidence 9999999432 4566666 899999999999998888 4899999998776 6788889999999999999986
Q ss_pred CeEEEEeeCCccCeEEEEEccCC---------ceeEEee-cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCc--EE
Q 015650 227 GSLVLVCPGLQKGQVRVEHYASK---------RTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT--LL 294 (403)
Q Consensus 227 ~~~~~~~~g~~d~~i~v~d~~~~---------~~~~~~~-~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~--~~ 294 (403)
...++++ |+.|+.|++||++.. ....+.. |...|.+++|++++ +|++++.||. |+|||..+++ .+
T Consensus 210 ~~~~l~s-~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 210 GVFRLCS-GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-LAVYEEVDGEWKVF 286 (330)
T ss_dssp SSCEEEE-EETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-EEEEEEETTEEEEE
T ss_pred CeeEEEE-EeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-EEEEEcCCCceEEE
Confidence 5545555 458999999998763 1222333 88999999999765 7899999999 9999998774 23
Q ss_pred EEEecCCCcc-cEEEEEeCC--CCCEEEEEeCCCcEEEEEeec
Q 015650 295 QEVRRGADRA-EIYSLAFSS--NAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 295 ~~~~~~~~~~-~v~~l~~s~--d~~~l~s~~~dg~v~iwd~~~ 334 (403)
.... ..|.. .|.+++|+| ++++|++|+.||+|+||++++
T Consensus 287 ~~~~-~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 287 AKRA-LCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEES-CTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred eccc-cccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 2322 22555 899999999 789999999999999999875
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.2e-34 Score=264.14 Aligned_cols=277 Identities=10% Similarity=0.089 Sum_probs=218.9
Q ss_pred CCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC
Q 015650 86 PTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~ 164 (403)
..+....|++++++|++|+.+ .|+||++.+.+.. ..+. +|...|.++.|++++..+++++.| +.|++||+.
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~ 169 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR--EIDQ-AHVSEITKLKFFPSGEALISSSQD-----MQLKIWSVK 169 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE--EETT-SSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETT
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCccee--eecc-cccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCC
Confidence 445555789999999999855 5999999876654 5555 799999999999999999999999 999999999
Q ss_pred CCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeec---cCCCceeEEE---------------
Q 015650 165 QSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIET---IANPKGLCAV--------------- 222 (403)
Q Consensus 165 ~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~--------------- 222 (403)
+++.+..+. |...|.+++|+|++.+++ .|++|++||+++++.+..+.. +...+..+++
T Consensus 170 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 170 DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp TCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 999999998 999999999999998877 489999999999998888864 3334444444
Q ss_pred ------eeCCCeEEEEeeCCccCeEEEEEccCCcee-EE-eecCCceEEEEEcCCCC-EEEEEeCCCcEEEEEEcCCCcE
Q 015650 223 ------SQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FI-MAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDGTL 293 (403)
Q Consensus 223 ------~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~-~~-~~~~~~i~~~~~sp~g~-~l~s~~~dg~~i~iwd~~~~~~ 293 (403)
+++++ ++++ |+.||.|++||++++... .+ ..|...|.+++|+|++. +|++++.||. |++||+++++.
T Consensus 250 v~~~~~s~~~~--~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~-i~vwd~~~~~~ 325 (420)
T 3vl1_A 250 KNNLEFGTYGK--YVIA-GHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM-LAQWDLRSPEC 325 (420)
T ss_dssp CCTTCSSCTTE--EEEE-EETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTS
T ss_pred ccceEEcCCCC--EEEE-EcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe-EEEEEcCCCcC
Confidence 45544 4444 458999999999886543 33 35788999999999999 9999999999 99999998754
Q ss_pred -EEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeee
Q 015650 294 -LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWS 372 (403)
Q Consensus 294 -~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (403)
+..+..+ |...|.++.| +++++|++++.||.|++|++...+...... ....
T Consensus 326 ~~~~~~~~-~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~--------------------------~~~~ 377 (420)
T 3vl1_A 326 PVGEFLIN-EGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAI--------------------------EFET 377 (420)
T ss_dssp CSEEEEES-TTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEE--------------------------CTTS
T ss_pred chhhhhcc-CCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccce--------------------------eccC
Confidence 6677654 6678888866 578899999999999999999865321110 0000
Q ss_pred eEEEEEeCCCceEEEeccCCC---EEEEEccCC
Q 015650 373 VAQFRLVEGSPYIVAFGHQKN---TVVILGMDG 402 (403)
Q Consensus 373 ~~~~~~~~~~~~~~~fs~d~~---~l~~~~~dG 402 (403)
...+..+.+.+..++|+|+++ .|++++.+|
T Consensus 378 ~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g 410 (420)
T 3vl1_A 378 PTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNN 410 (420)
T ss_dssp CEEECCSSCCCCEEEEECCSSSSCEEEEEETTT
T ss_pred ccEEccCCcceEEEEEccCCCCcceEEEEcCCc
Confidence 122456678899999999999 677777666
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-35 Score=276.91 Aligned_cols=308 Identities=9% Similarity=-0.037 Sum_probs=215.9
Q ss_pred CCCCeEEEEEcCCC---------CEEEEEc--------------------CCcEEEEEcCCCeeEE--EEecccCcceeE
Q 015650 84 PPPTLLHISFNQDH---------GCFAAGT--------------------DHGFRIYNCDPFREIF--RRDFERGGGIGV 132 (403)
Q Consensus 84 ~~~~i~~i~~s~d~---------~~l~~~~--------------------~~~i~iw~~~~~~~~~--~~~~~~~~~~~v 132 (403)
+.+.|.+|+|+|++ ++||+|. |+.|+||++.+.+... ...+. +|...|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~-~~~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV-HSFGEV 210 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEE-ECCCSE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEE-ecCCcE
Confidence 57889999999986 6777754 2349999997765322 12343 566789
Q ss_pred EEEeeeCC------eEEEeeCCCCCCCCCceEEEEECCCCce-----------eEEEe-cCCceeEEEEecCceEEE--e
Q 015650 133 VEMLFRCN------ILALVGGGPDPQYPLNKVMIWDDHQSRC-----------IGELS-FRSEVRSVKLRRDRIIVV--L 192 (403)
Q Consensus 133 ~~~~~~~~------~~~~~s~~~d~~~~~~~i~iwd~~~~~~-----------~~~~~-~~~~i~~~~~~~~~~~~~--~ 192 (403)
..++|+|+ +..|++++.| |+|++||+.+++. ...+. |...|.+++|++++.++. .
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~D-----gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~ 285 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQE-----GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFK 285 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETT-----SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEET
T ss_pred EEEEECCCCCCCCCCceEEEEecC-----CeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeC
Confidence 99999986 5689999988 9999999987642 23455 889999999998875544 4
Q ss_pred cCeEEEEEcCCce-eeeEeeccCCCceeEE--EeeCCCeEEEEeeCCccCeEEEEEccCCc-eeEEeecCC--ceEEEEE
Q 015650 193 EQKIFVYNFADLK-LLHQIETIANPKGLCA--VSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDS--RIACFAL 266 (403)
Q Consensus 193 d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~--~i~~~~~ 266 (403)
||+|++||+++++ ....+..|...|..++ +++++.. ++++ ++.|++|+|||+++.. ...+.+|.. .|.+++|
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~-~laS-~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~f 363 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDT-VVST-VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVY 363 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCC-EEEE-EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEE
T ss_pred CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCe-EEEE-eccCCeEEEEECCCCCcccccccccccCcccceEe
Confidence 9999999999764 4556888999999884 4555423 4454 4589999999998844 345566653 5889999
Q ss_pred cCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCC-
Q 015650 267 TQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRS- 345 (403)
Q Consensus 267 sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~- 345 (403)
+|+++.|++++.|++ |++||++++.++..+.+ |...|++|+|+|+|++|++|+.||+|++||+... .........
T Consensus 364 sp~~~~l~s~~~d~t-v~lwd~~~~~~~~~l~g--H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~ 439 (524)
T 2j04_B 364 CPQIYSYIYSDGASS-LRAVPSRAAFAVHPLVS--RETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSA 439 (524)
T ss_dssp ETTTTEEEEECSSSE-EEEEETTCTTCCEEEEE--CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC-----
T ss_pred CCCcCeEEEeCCCCc-EEEEECcccccceeeec--CCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCcc
Confidence 999999999999999 99999999998888876 7789999999999999999999999999998654 222111000
Q ss_pred C-------CCCCCcccc-cccccccccceee-eeeeeEEEEEeCCCceEEEeccCCC---EEEEEccCCC
Q 015650 346 T-------SDPTLPTSS-LSFIKGVLPKYFS-SEWSVAQFRLVEGSPYIVAFGHQKN---TVVILGMDGR 403 (403)
Q Consensus 346 ~-------~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~fs~d~~---~l~~~~~dG~ 403 (403)
. ....+++.. ..+.......... .......+..|++.|.+|+|+|+++ .|++|+.||+
T Consensus 440 ~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~ 509 (524)
T 2j04_B 440 TQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGL 509 (524)
T ss_dssp -CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSE
T ss_pred ceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCce
Confidence 0 011111111 0010100000011 1223455778889999999999964 9999999984
No 55
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.9e-34 Score=256.09 Aligned_cols=241 Identities=13% Similarity=0.177 Sum_probs=204.8
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCee----EEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCC
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFRE----IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~ 153 (403)
.....|...|.+++|+|+|.+|++|+ |+.+++|++..... .....+. .|...+..+.|++++..+++++.|
T Consensus 100 ~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~D--- 175 (354)
T 2pbi_B 100 HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTASGD--- 175 (354)
T ss_dssp EEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEETT---
T ss_pred eEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEeCC---
Confidence 44566888999999999999999998 55599999854311 1112333 588899999999999889999998
Q ss_pred CCceEEEEECCCCceeEEEe-cCCceeEEEEec--CceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCC
Q 015650 154 PLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRR--DRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG 227 (403)
Q Consensus 154 ~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~--~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (403)
++|++||+++++.+..+. |...|.+++|+| ++.+++ .|++|++||+++++++..+..|...+..++|+|+++
T Consensus 176 --~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~ 253 (354)
T 2pbi_B 176 --GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD 253 (354)
T ss_dssp --SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred --CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCC
Confidence 999999999999999998 899999999987 456666 499999999999999999999999999999999887
Q ss_pred eEEEEeeCCccCeEEEEEccCCceeEE-ee--cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcc
Q 015650 228 SLVLVCPGLQKGQVRVEHYASKRTKFI-MA--HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRA 304 (403)
Q Consensus 228 ~~~~~~~g~~d~~i~v~d~~~~~~~~~-~~--~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~ 304 (403)
. +++ ++.|+.|++||++....... .. +...+.+++|+|+|++|++|+.|+. |++||+.+++.+..+.+ |..
T Consensus 254 ~--l~s-~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~l~~--h~~ 327 (354)
T 2pbi_B 254 A--FAS-GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-INVWDVLKGSRVSILFG--HEN 327 (354)
T ss_dssp E--EEE-EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCSEEEEECC--CSS
T ss_pred E--EEE-EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-EEEEECCCCceEEEEEC--CCC
Confidence 4 444 34899999999998654433 32 2347899999999999999999999 99999999999888875 778
Q ss_pred cEEEEEeCCCCCEEEEEeCCCcEEEEE
Q 015650 305 EIYSLAFSSNAQWLAVSSDKGTVHVFN 331 (403)
Q Consensus 305 ~v~~l~~s~d~~~l~s~~~dg~v~iwd 331 (403)
.|++++|+|||++|++|+.||+|+||+
T Consensus 328 ~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 328 RVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred cEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999999995
No 56
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-33 Score=255.64 Aligned_cols=273 Identities=12% Similarity=0.084 Sum_probs=222.5
Q ss_pred CCCCC--eEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEE
Q 015650 83 SPPPT--LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (403)
Q Consensus 83 ~~~~~--i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~i 160 (403)
+|... +.++.|++ +.+++++.++.|++|++.+++....... .|...|.+++|++++..+++++.+ |.|++
T Consensus 89 ~~~~~~~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~--~~~~~v~~v~~s~~~~~l~~~~~d-----g~i~i 160 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAET--DESTYVASVKWSHDGSFLSVGLGN-----GLVDI 160 (401)
T ss_dssp TCCCCTTCBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEEC--CTTCCEEEEEECTTSSEEEEEETT-----SCEEE
T ss_pred CCcCCceEEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeec--CCCCCEEEEEECCCCCEEEEECCC-----CeEEE
Confidence 45444 55577775 4455555677799999998876643333 478899999999999999999988 99999
Q ss_pred EECCCCceeEEEe-cCCceeEEEEecCceEEE-ecCeEEEEEcC-CceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCc
Q 015650 161 WDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV-LEQKIFVYNFA-DLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (403)
Q Consensus 161 wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 237 (403)
||+.+++.+..+. |...|.+++|+++..... .|+.|++||++ ....+..+..|...+..++|++++.. +++ ++.
T Consensus 161 wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~s-~~~ 237 (401)
T 4aez_A 161 YDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQ--LAS-GGN 237 (401)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE--EEE-EET
T ss_pred EECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCE--EEE-EeC
Confidence 9999999999998 999999999965433333 58999999998 46677888889999999999998764 343 348
Q ss_pred cCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCC-EEEEEe--CCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCC
Q 015650 238 KGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQ-LLATSS--TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (403)
Q Consensus 238 d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~-~l~s~~--~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 313 (403)
|+.|++||++... ...+..|...|.+++|+|++. ++++++ .|+. |++||+.+++++..+. +...|.+++|+|
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~-i~i~d~~~~~~~~~~~---~~~~v~~~~~s~ 313 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ-IHFWNAATGARVNTVD---AGSQVTSLIWSP 313 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE-EEEEETTTCCEEEEEE---CSSCEEEEEECS
T ss_pred CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE-EEEEECCCCCEEEEEe---CCCcEEEEEECC
Confidence 9999999999855 456678999999999999764 556654 7999 9999999999999887 557899999999
Q ss_pred CCCEEEEEe--CCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccC
Q 015650 314 NAQWLAVSS--DKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQ 391 (403)
Q Consensus 314 d~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d 391 (403)
++++|++++ .||.|++||+.+++.. ....+..|.+.+..++|+|+
T Consensus 314 ~~~~l~~~~g~~dg~i~v~~~~~~~~~---------------------------------~~~~~~~h~~~v~~~~~s~d 360 (401)
T 4aez_A 314 HSKEIMSTHGFPDNNLSIWSYSSSGLT---------------------------------KQVDIPAHDTRVLYSALSPD 360 (401)
T ss_dssp SSSEEEEEECTTTCEEEEEEEETTEEE---------------------------------EEEEEECCSSCCCEEEECTT
T ss_pred CCCeEEEEeecCCCcEEEEecCCccce---------------------------------eEEEecCCCCCEEEEEECCC
Confidence 999999954 8999999999986520 12235677889999999999
Q ss_pred CCEEEEEccCCC
Q 015650 392 KNTVVILGMDGR 403 (403)
Q Consensus 392 ~~~l~~~~~dG~ 403 (403)
+++|++++.||+
T Consensus 361 g~~l~s~~~dg~ 372 (401)
T 4aez_A 361 GRILSTAASDEN 372 (401)
T ss_dssp SSEEEEECTTSE
T ss_pred CCEEEEEeCCCc
Confidence 999999999984
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.4e-35 Score=268.35 Aligned_cols=268 Identities=10% Similarity=0.077 Sum_probs=216.2
Q ss_pred CeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCC
Q 015650 87 TLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~ 165 (403)
.+++++|+|++++|++++ ++.|++|++.+.+.. ..+. .+ ..+....+++++..+++++.| +.|++||+.+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~--~~~~-~~-~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 128 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGS--KMLK-RA-DYTAVDTAKLQMRRFILGTTE-----GDIKVLDSNF 128 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETT--TTSC-SC-CEEEEEEECSSSCEEEEEETT-----SCEEEECTTS
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEeccccee--eEEe-cC-CceEEEEEecCCCEEEEEECC-----CCEEEEeCCC
Confidence 355789999999999998 556999998765443 3343 23 344445678899899999988 9999999999
Q ss_pred CceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeE
Q 015650 166 SRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQV 241 (403)
Q Consensus 166 ~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i 241 (403)
++....+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+..++|+|+++.+ ++ ++.|+.|
T Consensus 129 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l--~s-~~~d~~v 205 (420)
T 3vl1_A 129 NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNV--LS-ASLDGTI 205 (420)
T ss_dssp CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEE--EE-EETTSCE
T ss_pred cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEE--EE-EcCCCcE
Confidence 98888875 999999999999998887 48999999999999999999999999999999998744 33 3489999
Q ss_pred EEEEccCCce-eEEee---cCCce---------------------EEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEE
Q 015650 242 RVEHYASKRT-KFIMA---HDSRI---------------------ACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (403)
Q Consensus 242 ~v~d~~~~~~-~~~~~---~~~~i---------------------~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~ 296 (403)
++||+++++. ..+.. |...+ .+++|+|++++|++++.||. |++||+++++.+..
T Consensus 206 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 206 RLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV-ITVHNVFSKEQTIQ 284 (420)
T ss_dssp EEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC-EEEEETTTCCEEEE
T ss_pred EEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe-EEEEECCCCceeEE
Confidence 9999988554 33432 33344 44555789999999999999 99999999998888
Q ss_pred EecCCCcccEEEEEeCCCCC-EEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEE
Q 015650 297 VRRGADRAEIYSLAFSSNAQ-WLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQ 375 (403)
Q Consensus 297 ~~~~~~~~~v~~l~~s~d~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (403)
+... |...|.+++|+|+++ +|++++.||.|++||+++++.. +..
T Consensus 285 ~~~~-~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~----------------------------------~~~ 329 (420)
T 3vl1_A 285 LPSK-FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP----------------------------------VGE 329 (420)
T ss_dssp ECCT-TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC----------------------------------SEE
T ss_pred cccc-cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc----------------------------------hhh
Confidence 7653 678999999999999 9999999999999999987631 223
Q ss_pred EEE-eCCCceEEEeccCCCEEEEEccCCC
Q 015650 376 FRL-VEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 376 ~~~-~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+.. +...+..+ +.+++++|++++.||+
T Consensus 330 ~~~~~~~~v~~~-~~~~~~~l~s~~~d~~ 357 (420)
T 3vl1_A 330 FLINEGTPINNV-YFAAGALFVSSGFDTS 357 (420)
T ss_dssp EEESTTSCEEEE-EEETTEEEEEETTTEE
T ss_pred hhccCCCCceEE-EeCCCCEEEEecCCcc
Confidence 455 34566666 4568899999999974
No 58
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4e-34 Score=250.92 Aligned_cols=236 Identities=12% Similarity=0.160 Sum_probs=193.5
Q ss_pred CcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCC--CceeEEEe-cCCceeEEEEecC--ceEEE---ecCeEEE
Q 015650 127 GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ--SRCIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFV 198 (403)
Q Consensus 127 ~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~--~~~~~~~~-~~~~i~~~~~~~~--~~~~~---~d~~i~i 198 (403)
+|...|.+++|++++..+++++.| ++|+|||+.. .+.+..+. |...|.+++|+++ +.+++ .|++|++
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred CCcCceEEEEECCCCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 789999999999999999999999 9999999874 36777887 9999999999863 67776 4999999
Q ss_pred EEcCCce--eeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc---eeEEeecCCceEEEEEcCC----
Q 015650 199 YNFADLK--LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR---TKFIMAHDSRIACFALTQD---- 269 (403)
Q Consensus 199 ~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~---~~~~~~~~~~i~~~~~sp~---- 269 (403)
||+++++ .+..+..|...+..++|+|+....++++ ++.|+.|++||++... ...+.+|...|.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s-~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEE-EECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 9998874 5566778889999999999742224444 4589999999998742 4567889999999999997
Q ss_pred ---------CCEEEEEeCCCcEEEEEEcCCCc----EEEEEecCCCcccEEEEEeCCCC---CEEEEEeCCCcEEEEEee
Q 015650 270 ---------GQLLATSSTKGTLVRIFNTLDGT----LLQEVRRGADRAEIYSLAFSSNA---QWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 270 ---------g~~l~s~~~dg~~i~iwd~~~~~----~~~~~~~~~~~~~v~~l~~s~d~---~~l~s~~~dg~v~iwd~~ 333 (403)
+++|++|+.|+. |+|||+++++ ....+.+ |...|.+++|+|++ .+|++++.|++|+|||++
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~-v~lwd~~~~~~~~~~~~~l~~--H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ---------CCEEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cccCCCCCCcceEEEEcCCCc-EEEEEEcCCCceEEEEEEecC--CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 579999999999 9999998766 5556664 77899999999995 899999999999999998
Q ss_pred cCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEE--EEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 334 VNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQF--RLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+.+... ....+ ..+.+.+..++|+|+|++|++++.||+
T Consensus 238 ~~~~~~--------------------------------~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~ 277 (297)
T 2pm7_B 238 NEQGPW--------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK 277 (297)
T ss_dssp STTSCC--------------------------------EEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC
T ss_pred CCCCcc--------------------------------ceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc
Confidence 754200 00001 234567899999999999999999985
No 59
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-35 Score=272.07 Aligned_cols=273 Identities=12% Similarity=0.168 Sum_probs=222.4
Q ss_pred CCCCeEEEEEcCCCC-EEEEE----------c-CCcEEEEEcCCCeeE-EEEecccCcceeEEEEeeeCCeEEEeeCCCC
Q 015650 84 PPPTLLHISFNQDHG-CFAAG----------T-DHGFRIYNCDPFREI-FRRDFERGGGIGVVEMLFRCNILALVGGGPD 150 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~-~l~~~----------~-~~~i~iw~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d 150 (403)
+...|.+++|+|+++ +|++| + |+.|+||++.+.... ....+ .|...+.++.|++++.++++++.|
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d 88 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL--QVDSKFNDLDWSHNNKIIAGALDN 88 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC--CCSSCEEEEEECSSSSCEEEEESS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE--ecCCceEEEEECCCCCeEEEEccC
Confidence 335788999999997 89998 5 445999999876532 11333 478899999999999999999888
Q ss_pred CCCCCceEEEEECCC----CceeEEEe-cCCceeEEEEecC-ceEEE---ecCeEEEEEcCCce------eeeE---eec
Q 015650 151 PQYPLNKVMIWDDHQ----SRCIGELS-FRSEVRSVKLRRD-RIIVV---LEQKIFVYNFADLK------LLHQ---IET 212 (403)
Q Consensus 151 ~~~~~~~i~iwd~~~----~~~~~~~~-~~~~i~~~~~~~~-~~~~~---~d~~i~i~d~~~~~------~~~~---~~~ 212 (403)
|.|++||+.+ .+.+..+. |...|.+++|+|+ +.+++ .|+.|++||+++++ .... +..
T Consensus 89 -----g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 89 -----GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp -----SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred -----CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccC
Confidence 9999999987 34667776 9999999999998 66666 48999999999876 3322 356
Q ss_pred cCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce-eEEeec------CCceEEEEEcCCC-CEEEEEeCCC---c
Q 015650 213 IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMAH------DSRIACFALTQDG-QLLATSSTKG---T 281 (403)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~~~------~~~i~~~~~sp~g-~~l~s~~~dg---~ 281 (403)
|...+..++|++++..++++ ++.|+.|++||++.+.. ..+..+ ...|.+++|+|++ .+|++++.|+ .
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFAS--AGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEE--ESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred CCCCeeEEEeCCCCCcEEEE--EcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 78889999999985554333 35899999999998654 444444 7889999999997 6899999998 9
Q ss_pred EEEEEEcCCC-cEEEEEe-cCCCcccEEEEEeCC-CCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCccccccc
Q 015650 282 LVRIFNTLDG-TLLQEVR-RGADRAEIYSLAFSS-NAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSF 358 (403)
Q Consensus 282 ~i~iwd~~~~-~~~~~~~-~~~~~~~v~~l~~s~-d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (403)
|++||++++ +.+..+. . |...|.+++|+| ++++|++++.||.|++||+++++.
T Consensus 242 -i~~~d~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~--------------------- 297 (416)
T 2pm9_A 242 -ILIWDLRNANTPLQTLNQG--HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ--------------------- 297 (416)
T ss_dssp -CCEEETTSTTSCSBCCCSC--CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE---------------------
T ss_pred -EEEEeCCCCCCCcEEeecC--ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc---------------------
Confidence 999999986 5555555 3 678999999999 999999999999999999998763
Q ss_pred ccccccceeeeeeeeEEEEEeCCCceEEEeccCC-CEEEEEccCCC
Q 015650 359 IKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQK-NTVVILGMDGR 403 (403)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~-~~l~~~~~dG~ 403 (403)
+..+..|.+.+..++|+|++ ++|++++.||+
T Consensus 298 --------------~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 298 --------------LSQFPARGNWCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp --------------EEEEECSSSCCCCEEECTTCTTEEEECCSSSE
T ss_pred --------------ceeecCCCCceEEEEECCCCCCEEEEEecCCc
Confidence 44467788899999999999 89999999984
No 60
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9e-34 Score=253.78 Aligned_cols=248 Identities=14% Similarity=0.204 Sum_probs=203.9
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCee--EEEEecccCcceeEEEEeeeC--CeEEEeeCCCCCC
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFRE--IFRRDFERGGGIGVVEMLFRC--NILALVGGGPDPQ 152 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~--~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~ 152 (403)
+.++.+|.+.|++++|+|++++|++|+.++ |+||++.+... .....+. +|...|.++.|++ ++..+++++.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~d-- 80 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYD-- 80 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETT--
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcCC--
Confidence 456789999999999999999999998555 99999986532 2335555 7889999999998 58888998888
Q ss_pred CCCceEEEEECCCC---------ceeEEEe-cCCceeEEEEecC--ceEEE---ecCeEEEEEcCCceeeeEee------
Q 015650 153 YPLNKVMIWDDHQS---------RCIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLKLLHQIE------ 211 (403)
Q Consensus 153 ~~~~~i~iwd~~~~---------~~~~~~~-~~~~i~~~~~~~~--~~~~~---~d~~i~i~d~~~~~~~~~~~------ 211 (403)
|.|++||+.++ +.+..+. |...|.+++|+|+ +.+++ .|+.|++||+++++.+..+.
T Consensus 81 ---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 81 ---KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp ---SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred ---CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc
Confidence 99999999887 4466666 8999999999998 87777 48999999999876554433
Q ss_pred -------ccCCCceeEEEeeC---CCeEEEEeeCCccCeEEEEEccCCc---eeEEeecCCceEEEEEcCCC----CEEE
Q 015650 212 -------TIANPKGLCAVSQG---VGSLVLVCPGLQKGQVRVEHYASKR---TKFIMAHDSRIACFALTQDG----QLLA 274 (403)
Q Consensus 212 -------~~~~~~~~~~~~~~---~~~~~~~~~g~~d~~i~v~d~~~~~---~~~~~~~~~~i~~~~~sp~g----~~l~ 274 (403)
.+...+..++++|+ ++ ++++ ++.++.+.+|+...+. ...+.+|...|.+++|+|++ ++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~--~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~ 234 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWCPSRFSPE--KLAV-SALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIA 234 (351)
T ss_dssp SCSCCCSSCSCCCEEEEECCCSSSCC--EEEE-EETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEE
T ss_pred ccccccCCcccceeEEEeccCCCCCc--EEEE-ecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEE
Confidence 45667888999987 44 3333 3478888888877755 44566899999999999998 8999
Q ss_pred EEeCCCcEEEEEEcCCC----------------------------------------------cEEEEEecCCCcccEEE
Q 015650 275 TSSTKGTLVRIFNTLDG----------------------------------------------TLLQEVRRGADRAEIYS 308 (403)
Q Consensus 275 s~~~dg~~i~iwd~~~~----------------------------------------------~~~~~~~~~~~~~~v~~ 308 (403)
+++.||. |++||+.++ +.+..+.. |...|++
T Consensus 235 s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~ 311 (351)
T 3f3f_A 235 TGCKDGR-IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD--HNGEVWS 311 (351)
T ss_dssp EEETTSC-EEEEEEEECC---------------------------------------CCSEEEEEEEEECT--TSSCEEE
T ss_pred EEcCCCe-EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec--ccccEEE
Confidence 9999999 999999764 45555554 7789999
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 309 LAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 309 l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
++|+|++++|++++.||.|+||++++++.
T Consensus 312 ~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 312 VSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred EEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 99999999999999999999999998874
No 61
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=256.08 Aligned_cols=248 Identities=15% Similarity=0.156 Sum_probs=206.4
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCC--eEEEeeCCCCCCCCC
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN--ILALVGGGPDPQYPL 155 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~s~~~d~~~~~ 155 (403)
.++.+|.+.|++++|+|++++|++|+. +.|+||++..........+. +|...|.++.|+++ +..+++++.|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~d----- 78 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYD----- 78 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETT-----
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec-CCCCcEEEEEeCCCCCCCEEEEeccC-----
Confidence 467889999999999999999999984 45999999866655556776 78999999999876 8889999988
Q ss_pred ceEEEEECCCCc--eeEEEe-cCCceeEEEEecC--ceEEE---ecCeEEEEEcCCce--eeeEeeccCCCceeEEEeeC
Q 015650 156 NKVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLK--LLHQIETIANPKGLCAVSQG 225 (403)
Q Consensus 156 ~~i~iwd~~~~~--~~~~~~-~~~~i~~~~~~~~--~~~~~---~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~ 225 (403)
|.|++||+.+++ .+..+. |...|.+++|+|+ +.+++ .|+.|++||++++. ....+..|...+..++|+|.
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 999999999987 556666 8899999999998 77766 48999999998873 34456678889999999994
Q ss_pred -------------CCeEEEEeeCCccCeEEEEEccCCc-----eeEEeecCCceEEEEEcCC---CCEEEEEeCCCcEEE
Q 015650 226 -------------VGSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAHDSRIACFALTQD---GQLLATSSTKGTLVR 284 (403)
Q Consensus 226 -------------~~~~~~~~~g~~d~~i~v~d~~~~~-----~~~~~~~~~~i~~~~~sp~---g~~l~s~~~dg~~i~ 284 (403)
+. ++++ ++.|+.|++||++... ...+..|...|.+++|+|+ +++|++++.||. |+
T Consensus 159 ~~~~~~~~~~~~~~~--~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~-i~ 234 (379)
T 3jrp_A 159 TIEEDGEHNGTKESR--KFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CI 234 (379)
T ss_dssp C----------CTTC--EEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EE
T ss_pred cccccccccCCCCCC--EEEE-EeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE-EE
Confidence 44 3343 3489999999998743 2456789999999999999 899999999999 99
Q ss_pred EEEcCCCc---EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 285 IFNTLDGT---LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 285 iwd~~~~~---~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
+||+.+++ ....+....|...|++++|+|++++|++++.||.|++|+++...
T Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 235 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred EEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 99998874 33333333467899999999999999999999999999999654
No 62
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-35 Score=269.84 Aligned_cols=240 Identities=13% Similarity=0.085 Sum_probs=190.3
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 81 SSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
...+.+.|++++|+|++++|++|+ ++.|+||++.+........+. +|...|.++.|++++..+++++.| +.|+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~ 80 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQD-----RNAY 80 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETT-----SSEE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCC-----CeEE
Confidence 344677899999999999999997 555999999877433446676 789999999999999999999998 9999
Q ss_pred EEECCCCc---eeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCce---eeeEeec-cCCCceeEEEeeCCCe
Q 015650 160 IWDDHQSR---CIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLK---LLHQIET-IANPKGLCAVSQGVGS 228 (403)
Q Consensus 160 iwd~~~~~---~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~ 228 (403)
+||+.+++ ....+. |...|.+++|+|++.+++ .|+.|++||+++++ ....+.. |...+..++|+|+++.
T Consensus 81 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp EC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred EEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 99999887 445554 899999999999988777 48999999999876 4677777 8899999999998763
Q ss_pred EEEEeeCCccCeEEEEEccCC-------------------ceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcC
Q 015650 229 LVLVCPGLQKGQVRVEHYASK-------------------RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (403)
Q Consensus 229 ~~~~~~g~~d~~i~v~d~~~~-------------------~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~ 289 (403)
+++ ++.|+.|++||++.. ....+ .|...|.+++|+|++++|++++.|+. |++||+.
T Consensus 161 --l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~-i~iwd~~ 235 (377)
T 3dwl_C 161 --LAA-GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS-VTIAYPS 235 (377)
T ss_dssp --EEE-EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE-EC-CEEC
T ss_pred --EEE-EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc-EEEEECC
Confidence 443 348999999998521 22233 89999999999999999999999999 9999999
Q ss_pred CCcE----EEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeec
Q 015650 290 DGTL----LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 290 ~~~~----~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~ 334 (403)
+++. +..+.. |...|.+++|+|++++|++++.++.+ +|+...
T Consensus 236 ~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 236 APEQPPRALITVKL--SQLPLRSLLWANESAIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp STTSCEEECCCEEC--SSSCEEEEEEEETTEEEEEESSSSEE-EECCCC
T ss_pred CCCCcceeeEeecC--CCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCC
Confidence 9887 666665 67899999999999999998866655 776653
No 63
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-33 Score=258.09 Aligned_cols=247 Identities=13% Similarity=0.166 Sum_probs=208.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEE
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~i 160 (403)
..|...|.+++|+|++++|++|+.+ .|++|++.+++.. ..+. +|...+.++.|+++ .+++++.| |.|++
T Consensus 131 ~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~-~~~~~v~~~~~~~~--~l~~~~~d-----g~i~i 200 (401)
T 4aez_A 131 TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKL--RTMA-GHQARVGCLSWNRH--VLSSGSRS-----GAIHH 200 (401)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEEC-CCSSCEEEEEEETT--EEEEEETT-----SEEEE
T ss_pred cCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEE--EEec-CCCCceEEEEECCC--EEEEEcCC-----CCEEE
Confidence 3488999999999999999999855 4999999887765 5565 78899999999665 66777777 99999
Q ss_pred EECC-CCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeC
Q 015650 161 WDDH-QSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (403)
Q Consensus 161 wd~~-~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 235 (403)
||+. .+..+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+..++|+|++..+++..+|
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECC
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecC
Confidence 9998 456677777 999999999999998888 38999999999999999998899999999999998877665545
Q ss_pred CccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEE--eCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCC
Q 015650 236 LQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATS--STKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (403)
Q Consensus 236 ~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~--~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 313 (403)
+.|+.|++||++++.......+...|.+++|+|++++|+++ +.||. |++||+.+++.........|...|.+++|+|
T Consensus 281 s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~-i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 359 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN-LSIWSYSSSGLTKQVDIPAHDTRVLYSALSP 359 (401)
T ss_dssp TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE-EEEEEEETTEEEEEEEEECCSSCCCEEEECT
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc-EEEEecCCccceeEEEecCCCCCEEEEEECC
Confidence 68999999999987766666688899999999999999984 48999 9999999977666544334778999999999
Q ss_pred CCCEEEEEeCCCcEEEEEeecCCCCC
Q 015650 314 NAQWLAVSSDKGTVHVFNLKVNSGSA 339 (403)
Q Consensus 314 d~~~l~s~~~dg~v~iwd~~~~~~~~ 339 (403)
++++|++++.||.|++|++.+++...
T Consensus 360 dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 360 DGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp TSSEEEEECTTSEEEEEECCC-----
T ss_pred CCCEEEEEeCCCcEEEEECCCCcccc
Confidence 99999999999999999999988543
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.2e-33 Score=246.68 Aligned_cols=237 Identities=11% Similarity=0.199 Sum_probs=209.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEE
Q 015650 83 SPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (403)
Q Consensus 83 ~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iw 161 (403)
.|...|.+++|+|++++|++++.+ .|++|++.+.+......+. .|...+.++.|++++..+++++.+ +.|++|
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~ 168 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSD-----GNIAVW 168 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETT-----SCEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc-cCCCceEEEEECCCCCEEEEEeCC-----CcEEEE
Confidence 789999999999999999998855 4999999887755545565 688889999999999999999888 999999
Q ss_pred ECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCc
Q 015650 162 DDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (403)
Q Consensus 162 d~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 237 (403)
|+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+. +...+..++++++++.+++ ++.
T Consensus 169 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~---~~~ 244 (337)
T 1gxr_A 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAV---GME 244 (337)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEE---EET
T ss_pred eCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEE---EcC
Confidence 999999999888 899999999999998777 48999999999998887774 5677889999999875433 347
Q ss_pred cCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCE
Q 015650 238 KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQW 317 (403)
Q Consensus 238 d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~ 317 (403)
++.|++||++......+..|...|.+++|+|++++|++++.||. |++||+.+++.+.... |...|.+++|+|++++
T Consensus 245 ~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~ 320 (337)
T 1gxr_A 245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL-LNAWRTPYGASIFQSK---ESSSVLSCDISVDDKY 320 (337)
T ss_dssp TSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEE---CSSCEEEEEECTTSCE
T ss_pred CCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc-EEEEECCCCeEEEEec---CCCcEEEEEECCCCCE
Confidence 89999999999888888899999999999999999999999999 9999999999886655 6789999999999999
Q ss_pred EEEEeCCCcEEEEEee
Q 015650 318 LAVSSDKGTVHVFNLK 333 (403)
Q Consensus 318 l~s~~~dg~v~iwd~~ 333 (403)
|++++.||.|++|++.
T Consensus 321 l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 321 IVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEETTSCEEEEEEE
T ss_pred EEEecCCCeEEEEEEe
Confidence 9999999999999974
No 65
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8.3e-33 Score=244.77 Aligned_cols=267 Identities=13% Similarity=0.132 Sum_probs=220.6
Q ss_pred eEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc
Q 015650 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (403)
Q Consensus 88 i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~ 167 (403)
.++|+||+++ +||+|.|+.|+|||+.+++......+. +|...|.++.|++++..+++++.| |.|++||+++++
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~-~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~ 100 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQME-QPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQK 100 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECC-STTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTE
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEec-CCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCce
Confidence 4679999986 899999999999999998877555554 688899999999999999999999 999999999999
Q ss_pred eeEEEe-cCCceeEEEEecCceEEE-ecCeEEEEEcCCc-eeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEE
Q 015650 168 CIGELS-FRSEVRSVKLRRDRIIVV-LEQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVE 244 (403)
Q Consensus 168 ~~~~~~-~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~ 244 (403)
.+..+. |...+.++.+.+...... .++.+++|+.... ..+..+..|...+..+.+.++++. +++ ++.|+.|++|
T Consensus 101 ~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~s-~~~d~~i~iw 177 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH--LAS-GGNDNLVNVW 177 (318)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE--EEE-EETTSCEEEE
T ss_pred eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCE--EEE-EecCcceeEE
Confidence 999988 888887766655432222 4889999998775 456677888888999999998874 333 3489999999
Q ss_pred EccCCc-----eeEEeecCCceEEEEEcCCCCEE---EEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCC
Q 015650 245 HYASKR-----TKFIMAHDSRIACFALTQDGQLL---ATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ 316 (403)
Q Consensus 245 d~~~~~-----~~~~~~~~~~i~~~~~sp~g~~l---~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 316 (403)
|+++++ ......+...|.++.++|++..+ ++++.++. |++||........... +...+..+.|+|++.
T Consensus 178 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-i~lwd~~~~~~~~~~~---~~~~v~~~~~~~~~~ 253 (318)
T 4ggc_A 178 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVD---AHSQVCSILWSPHYK 253 (318)
T ss_dssp ESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE-EEEEETTTCCEEEEEE---CSSCEEEEEEETTTT
T ss_pred ECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCE-EEEEeccccccccccc---ceeeeeeeeeccccc
Confidence 998743 34456788899999999976533 45677888 9999999988877766 557899999999999
Q ss_pred EEEEEe--CCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCE
Q 015650 317 WLAVSS--DKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNT 394 (403)
Q Consensus 317 ~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~ 394 (403)
.+++++ .|+.|+|||+++++. +..+++|.+.|++++|+|||++
T Consensus 254 ~~~~~sg~~d~~i~iwd~~~~~~-----------------------------------~~~l~gH~~~V~~l~~spdg~~ 298 (318)
T 4ggc_A 254 ELISGHGFAQNQLVIWKYPTMAK-----------------------------------VAELKGHTSRVLSLTMSPDGAT 298 (318)
T ss_dssp EEEEEECTTTCCEEEEETTTCCE-----------------------------------EEEECCCSSCEEEEEECTTSSC
T ss_pred ceEEEEEcCCCEEEEEECCCCcE-----------------------------------EEEEcCCCCCEEEEEEcCCCCE
Confidence 887765 799999999998873 4457788999999999999999
Q ss_pred EEEEccCCC
Q 015650 395 VVILGMDGR 403 (403)
Q Consensus 395 l~~~~~dG~ 403 (403)
|++|+.||+
T Consensus 299 l~S~s~D~~ 307 (318)
T 4ggc_A 299 VASAAADET 307 (318)
T ss_dssp EEEEETTTE
T ss_pred EEEEecCCe
Confidence 999999985
No 66
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.2e-33 Score=250.36 Aligned_cols=244 Identities=13% Similarity=0.187 Sum_probs=197.9
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCce
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (403)
..+.+|...|.+++|+|++.+|++|+ |+.|+|||+.+++.. ..+. +|...|.+++|++++..+++++.| +.
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~--~~~~-~h~~~v~~v~~sp~~~~l~s~~~d-----~~ 141 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY--KRFV-GHQSEVYSVAFSPDNRQILSAGAE-----RE 141 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE--EEEE-CCCSCEEEEEECSSTTEEEEEETT-----SC
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE--EEEc-CCCCcEEEEEECCCCCEEEEEcCC-----CE
Confidence 46789999999999999999999998 555999999887755 5565 789999999999999999999999 99
Q ss_pred EEEEECCCCceeEEE---ecCCceeEEEEecCc----------eEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEE
Q 015650 158 VMIWDDHQSRCIGEL---SFRSEVRSVKLRRDR----------IIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCA 221 (403)
Q Consensus 158 i~iwd~~~~~~~~~~---~~~~~i~~~~~~~~~----------~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 221 (403)
|++||+......... .|...|.+++|+|++ .+++ .|+.|++|| ...+....+..|...+..++
T Consensus 142 i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 142 IKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLS 220 (343)
T ss_dssp EEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEE
T ss_pred EEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEE
Confidence 999998744333222 277889999999986 4555 499999999 45677778889999999999
Q ss_pred EeeCCCeEEEEeeCCccCeEEEEEccC-CceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEE--EEe
Q 015650 222 VSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ--EVR 298 (403)
Q Consensus 222 ~~~~~~~~~~~~~g~~d~~i~v~d~~~-~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~--~~~ 298 (403)
|+|+++. +++ |+.|+.|++||+.. ........+...|.+++|+|++.+|+++ .|+. |++||+.+++... .+.
T Consensus 221 ~s~~g~~--l~s-gs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~-v~iw~~~~~~~~~~~~~~ 295 (343)
T 2xzm_R 221 ISPNGKY--IAT-GGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQG-VKIFNLMTQSKAPVCTIE 295 (343)
T ss_dssp ECTTSSE--EEE-EETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSC-EEEEESSSCCSCSEEECC
T ss_pred ECCCCCE--EEE-EcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCC-EEEEEeCCCCCCceEEee
Confidence 9999874 444 45899999999954 4333444466779999999999988755 5777 9999998776543 333
Q ss_pred c---------CCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 299 R---------GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 299 ~---------~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
. ..|...|.+++|+|+|++|++|+.||.|++|++++++
T Consensus 296 ~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 296 AEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp CCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred cCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 1 1266789999999999999999999999999998864
No 67
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.3e-32 Score=253.31 Aligned_cols=247 Identities=13% Similarity=0.165 Sum_probs=210.7
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 81 SSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
..+|...|++|+|+|+|++|++|+.+ .|+||++.+++.. ..+. +|...+.++.+++. .+++++.| +.++
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~--~~~~-~h~~~v~~~s~~~~--~l~sgs~d-----~~i~ 212 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL--RNMT-SHSARVGSLSWNSY--ILSSGSRS-----GHIH 212 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEEETT--EEEEEETT-----SEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE--EEEe-CCCCceEEEeeCCC--EEEEEeCC-----Ccee
Confidence 45788899999999999999999855 4999999988765 5565 78889999888765 67777777 9999
Q ss_pred EEECCCC-ceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCce----eeeEeeccCCCceeEEEeeCCCeEE
Q 015650 160 IWDDHQS-RCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLK----LLHQIETIANPKGLCAVSQGVGSLV 230 (403)
Q Consensus 160 iwd~~~~-~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (403)
+||.... ..+..+. |...+..+.+++++.+++ .|+.+++|+..+++ .+.....+...+..++++|.+..++
T Consensus 213 ~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~l 292 (420)
T 4gga_A 213 HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL 292 (420)
T ss_dssp EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEE
T ss_pred EeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEE
Confidence 9998875 4456666 899999999999999888 48999999998764 3456677888999999999988877
Q ss_pred EEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEe--CCCcEEEEEEcCCCcEEEEEecCCCcccEEE
Q 015650 231 LVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS--TKGTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~--~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (403)
...+|+.|+.|++||+.++.......+...+.++.|+|+++.|++++ .|+. |+|||+.+++++.++.+ |...|++
T Consensus 293 a~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~-I~iwd~~~~~~v~~l~g--H~~~V~~ 369 (420)
T 4gga_A 293 ATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELKG--HTSRVLS 369 (420)
T ss_dssp EEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEECC--CSSCEEE
T ss_pred EEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE-EEEEECCCCcEEEEEcC--CCCCEEE
Confidence 76677899999999999988776666777899999999999998765 6899 99999999999999986 7789999
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEEeecCCCCCC
Q 015650 309 LAFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (403)
Q Consensus 309 l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~ 340 (403)
++|+|||++|++|+.|++|+|||+.+..+..+
T Consensus 370 l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 370 LTMSPDGATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp EEECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred EEEcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence 99999999999999999999999987765433
No 68
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.2e-33 Score=257.10 Aligned_cols=283 Identities=11% Similarity=0.096 Sum_probs=226.1
Q ss_pred ccccCCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEEcCCCeeEEEEecc----------cCcceeEEEEeeeC-CeEEE
Q 015650 78 ESTSSSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRDFE----------RGGGIGVVEMLFRC-NILAL 144 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~-d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~-~~~~~ 144 (403)
...+.+|.+.|++++|+| ++++|++|+.++ |+||++.+.......... .+|...|.++.|++ ++..+
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 356678999999999999 999999998554 999999866543211110 24888999999999 67788
Q ss_pred eeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCc---eEEE---ecCeEEEEEcCCceeeeEeeccCCCce
Q 015650 145 VGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR---IIVV---LEQKIFVYNFADLKLLHQIETIANPKG 218 (403)
Q Consensus 145 ~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~ 218 (403)
++++.| +.|++||+.+++.+..+.+...+.++.+.+.+ .+++ .|+.|++||+++++.+..+..|...+.
T Consensus 116 ~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~ 190 (408)
T 4a11_B 116 TSSSFD-----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEIL 190 (408)
T ss_dssp EEEETT-----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEE
T ss_pred EEEeCC-----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEE
Confidence 888888 99999999999999999999999999999854 3555 489999999999999999999999999
Q ss_pred eEEEeeCCCeEEEEeeCCccCeEEEEEccCCc--eeEE---------------eecCCceEEEEEcCCCCEEEEEeCCCc
Q 015650 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR--TKFI---------------MAHDSRIACFALTQDGQLLATSSTKGT 281 (403)
Q Consensus 219 ~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~--~~~~---------------~~~~~~i~~~~~sp~g~~l~s~~~dg~ 281 (403)
.++|+|+++.++++ ++.||.|++||++... ...+ ..|...|.+++|+|++++|++++.|+.
T Consensus 191 ~~~~~~~~~~ll~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 191 AVSWSPRYDYILAT--ASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp EEEECSSCTTEEEE--EETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEECCCCCcEEEE--EcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 99999998864433 3589999999998743 2222 568899999999999999999999999
Q ss_pred EEEEEEcCCCcEEEEEecCCC---cccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCccccccc
Q 015650 282 LVRIFNTLDGTLLQEVRRGAD---RAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSF 358 (403)
Q Consensus 282 ~i~iwd~~~~~~~~~~~~~~~---~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (403)
|++||+.+++....+..... ...+........+..+++++.++.|++||+.+++.
T Consensus 269 -i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~--------------------- 326 (408)
T 4a11_B 269 -MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ--------------------- 326 (408)
T ss_dssp -EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE---------------------
T ss_pred -EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc---------------------
Confidence 99999998876554432111 11222222333455677778899999999998773
Q ss_pred ccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 359 IKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+..+..|.+.|++++|+|++++|++|+.||+
T Consensus 327 --------------~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 357 (408)
T 4a11_B 327 --------------ITMLKGHYKTVDCCVFQSNFQELYSGSRDCN 357 (408)
T ss_dssp --------------EEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred --------------eeeeccCCCeEEEEEEcCCCCEEEEECCCCe
Confidence 3446677889999999999999999999985
No 69
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.4e-33 Score=289.76 Aligned_cols=277 Identities=16% Similarity=0.224 Sum_probs=239.3
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
...+.+|.+.|++++|+|+|++|++|+.++ |+||++.+++.. ..+. +|...|.+++|++++.++++++.| +
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~--~~~~-~h~~~v~~~~~s~~~~~l~s~~~d-----~ 679 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL--LDIK-AHEDEVLCCAFSSDDSYIATCSAD-----K 679 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----S
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEE--EEec-cCCCCEEEEEEecCCCEEEEEeCC-----C
Confidence 356788999999999999999999998555 999999888765 5565 799999999999999999999998 9
Q ss_pred eEEEEECCCCceeEEEe-cCCceeEEEEecC--ceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEE
Q 015650 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~--~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (403)
.|++||+.+++.+..+. |...|.+++|+++ +.+++ .|+.|++||+++++.+..+.+|...+..++|+|+++.
T Consensus 680 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~-- 757 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDEL-- 757 (1249)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTE--
T ss_pred eEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCE--
Confidence 99999999999999998 9999999999994 44555 3899999999999999999999999999999999884
Q ss_pred EEeeCCccCeEEEEEccCCceeE-Ee-------------ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEE
Q 015650 231 LVCPGLQKGQVRVEHYASKRTKF-IM-------------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~~~~~~-~~-------------~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~ 296 (403)
+++ ++.||.|++||++.+.... +. .+...+.+++|+|+|+++++++ ++. +.+||+.++..+..
T Consensus 758 l~s-~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~-v~~~d~~~~~~~~~ 834 (1249)
T 3sfz_A 758 LAS-CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNK-VLLFDIHTSGLLAE 834 (1249)
T ss_dssp EEE-EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTE-EEEEETTTCCEEEE
T ss_pred EEE-EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCc-EEEEEecCCCceeE
Confidence 333 3489999999998854322 21 1234788999999999999887 567 99999999999888
Q ss_pred EecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEE
Q 015650 297 VRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQF 376 (403)
Q Consensus 297 ~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (403)
+... |...|.+++|+|+++++++++.||.|++||+.+++. ...+
T Consensus 835 ~~~~-~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~-----------------------------------~~~~ 878 (1249)
T 3sfz_A 835 IHTG-HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK-----------------------------------VADC 878 (1249)
T ss_dssp EECS-SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE-----------------------------------EEEE
T ss_pred EcCC-CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce-----------------------------------eeec
Confidence 8754 778999999999999999999999999999988763 3446
Q ss_pred EEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 377 RLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 377 ~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
..|.+.+.+++|+|+|++|++++.||+
T Consensus 879 ~~h~~~v~~v~~spdg~~l~s~s~dg~ 905 (1249)
T 3sfz_A 879 RGHLSWVHGVMFSPDGSSFLTASDDQT 905 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCccceEEEEECCCCCEEEEEeCCCe
Confidence 678889999999999999999999985
No 70
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.5e-32 Score=253.83 Aligned_cols=267 Identities=18% Similarity=0.243 Sum_probs=216.9
Q ss_pred ccccCCCCCCe-EEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 78 ESTSSSPPPTL-LHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 78 ~~~~~~~~~~i-~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
...+.+|...| .++.+ ++.+|++|+. +.|++||+.+++.. ..+. +|...|.++.|++++ .+++++.|
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~--~~~~-~h~~~V~~l~~~~~~-~l~s~s~d----- 182 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFL--LQLS-GHDGGVWALKYAHGG-ILVSGSTD----- 182 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEECSTT-EEEEEETT-----
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEE--EEEe-CCCcCEEEEEEcCCC-EEEEEeCC-----
Confidence 35677888875 66666 5679999885 55999999888765 5665 799999999999988 78888888
Q ss_pred ceEEEEECCCCceeEEEe-cCCceeEEEEe--cCceEEE---ecCeEEEEEcCCcee-----------------------
Q 015650 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLR--RDRIIVV---LEQKIFVYNFADLKL----------------------- 206 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~--~~~~~~~---~d~~i~i~d~~~~~~----------------------- 206 (403)
|.|++||+.+++.+..+. |...|.+++|+ +++.+++ .|+.|++||+++++.
T Consensus 183 g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 183 RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred CCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 999999999999999998 99999999998 4667666 489999999987653
Q ss_pred eeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEE
Q 015650 207 LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRI 285 (403)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~i 285 (403)
+..+.+|...+ .+++++++. +++ |+.|+.|++||+++.. ...+.+|...|.+++|+|++++|++|+.|+. |++
T Consensus 263 ~~~~~~~~~~v--~~~~~~~~~--l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~-i~v 336 (464)
T 3v7d_B 263 VGVLRGHMASV--RTVSGHGNI--VVS-GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT-IRI 336 (464)
T ss_dssp EEEECCCSSCE--EEEEEETTE--EEE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEE
T ss_pred EEEccCccceE--EEEcCCCCE--EEE-EeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc-EEE
Confidence 33444454444 445677664 333 3489999999998855 4567789999999999999999999999999 999
Q ss_pred EEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccc
Q 015650 286 FNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPK 365 (403)
Q Consensus 286 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (403)
||+.+++++..+.. |...|.++.|+ +++|++++.||.|++||+++++.
T Consensus 337 wd~~~~~~~~~~~~--h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~---------------------------- 384 (464)
T 3v7d_B 337 WDLENGELMYTLQG--HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR---------------------------- 384 (464)
T ss_dssp EETTTTEEEEEECC--CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE----------------------------
T ss_pred EECCCCcEEEEEeC--CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce----------------------------
Confidence 99999999999986 77899999997 58999999999999999988662
Q ss_pred eeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 366 YFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
.. ...+...+..++|++++++|++|+ ||
T Consensus 385 -------~~-~~~~~~~~~~~~~~~~~~~l~~~~-dg 412 (464)
T 3v7d_B 385 -------KF-SYHHTNLSAITTFYVSDNILVSGS-EN 412 (464)
T ss_dssp -------EE-EEECTTCCCEEEEEECSSEEEEEE-TT
T ss_pred -------ee-eecCCCCccEEEEEeCCCEEEEec-CC
Confidence 00 112455677889999999999988 65
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-34 Score=254.17 Aligned_cols=237 Identities=15% Similarity=0.206 Sum_probs=191.8
Q ss_pred CcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc--eeEEEe-cCCceeEEEEec--CceEEE---ecCeEEE
Q 015650 127 GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR--CIGELS-FRSEVRSVKLRR--DRIIVV---LEQKIFV 198 (403)
Q Consensus 127 ~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~--~~~~~~-~~~~i~~~~~~~--~~~~~~---~d~~i~i 198 (403)
+|...|.++.|++++..|++++.| ++|+|||+.+++ .+..+. |...|.+++|++ ++.+++ .|++|++
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred cccCeEEEeeEcCCCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 799999999999999999999999 999999998875 456677 999999999986 366666 4999999
Q ss_pred EEcCCc--eeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc----eeEEeecCCceEEEEEcCC---
Q 015650 199 YNFADL--KLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR----TKFIMAHDSRIACFALTQD--- 269 (403)
Q Consensus 199 ~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~----~~~~~~~~~~i~~~~~sp~--- 269 (403)
||++++ +.+..+..|...+..++|+|+....++++ |+.|+.|++||++... ...+.+|...+.+++|+|+
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~las-gs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILAC-GSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEE-ECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEE-EcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 999886 35667778999999999999854445665 4589999999998753 2334578899999999997
Q ss_pred --------------CCEEEEEeCCCcEEEEEEcCCC---cEEEEEecCCCcccEEEEEeCCCC----CEEEEEeCCCcEE
Q 015650 270 --------------GQLLATSSTKGTLVRIFNTLDG---TLLQEVRRGADRAEIYSLAFSSNA----QWLAVSSDKGTVH 328 (403)
Q Consensus 270 --------------g~~l~s~~~dg~~i~iwd~~~~---~~~~~~~~~~~~~~v~~l~~s~d~----~~l~s~~~dg~v~ 328 (403)
+++|++|+.|+. |++||++.. +++..+.+ |...|.+++|+|++ ++|++++.||+|+
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~-v~lWd~~~~~~~~~~~~l~~--h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNL-IKLWKEEEDGQWKEEQKLEA--HSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSB-CCEEEECTTSCEEEEECCBC--CSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred ccccccccccCccccceEEEecCCCe-EEEEEeCCCCccceeeeccc--CCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 478999999999 999999755 35555654 77899999999987 8999999999999
Q ss_pred EEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 329 VFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 329 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
||++++.... .+....+..+.+.+..++|+|++++|++++.||+
T Consensus 242 iw~~~~~~~~-------------------------------~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 242 IWTCDDASSN-------------------------------TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp EEECSSTTCC-------------------------------CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred EEEccCcccc-------------------------------chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 9999874310 0011123556789999999999999999999985
No 72
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.2e-34 Score=259.09 Aligned_cols=249 Identities=14% Similarity=0.202 Sum_probs=205.6
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCee-----EEEEecccCcceeEEEEeeeCC-eEEEeeCCCC
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFRE-----IFRRDFERGGGIGVVEMLFRCN-ILALVGGGPD 150 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d 150 (403)
...+..|...|.+++|+|+|++|++|+ |+.++||++..... .....+. +|...+.++.|.++ ...+++++.|
T Consensus 101 ~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-gh~~~v~~~~~~~~~~~~l~s~s~D 179 (380)
T 3iz6_a 101 THAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLT-GHKGYASSCQYVPDQETRLITGSGD 179 (380)
T ss_dssp EEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCC-CCSSCCCCCBCCSSSSSCEEEECTT
T ss_pred ceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeecc-CCCcceEEEEEecCCCCEEEEECCC
Confidence 356778999999999999999999998 55599999864321 1113444 78888999999886 4568888888
Q ss_pred CCCCCceEEEEECCCCceeEEE-----e-cCCceeEEEEec-CceEEE---ecCeEEEEEcC-CceeeeEeeccCCCcee
Q 015650 151 PQYPLNKVMIWDDHQSRCIGEL-----S-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFA-DLKLLHQIETIANPKGL 219 (403)
Q Consensus 151 ~~~~~~~i~iwd~~~~~~~~~~-----~-~~~~i~~~~~~~-~~~~~~---~d~~i~i~d~~-~~~~~~~~~~~~~~~~~ 219 (403)
++|++||+.+++.+..+ . |...|.++.|++ ++.+++ .|++|++||++ .++.+..+.+|...+..
T Consensus 180 -----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~ 254 (380)
T 3iz6_a 180 -----QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINS 254 (380)
T ss_dssp -----SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCE
T ss_pred -----CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEE
Confidence 99999999999988877 3 778899999987 677766 49999999998 45778889999999999
Q ss_pred EEEeeCCCeEEEEeeCCccCeEEEEEccCCceeE-Eeec-------CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCC
Q 015650 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKF-IMAH-------DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (403)
Q Consensus 220 ~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~-~~~~-------~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~ 291 (403)
++|+|++.. +++ |+.|+.|++||++++.... +..+ ...|.+++|+|+|++|++|+.||. |++||+.++
T Consensus 255 v~~~p~~~~--l~s-~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-i~vwd~~~~ 330 (380)
T 3iz6_a 255 VKFFPDGQR--FGT-GSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-CYVWDTLLA 330 (380)
T ss_dssp EEECTTSSE--EEE-ECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-EEEEETTTC
T ss_pred EEEecCCCe--EEE-EcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-EEEEECCCC
Confidence 999999874 444 4589999999999865433 3332 234899999999999999999999 999999999
Q ss_pred cEEEEEec--CCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 292 TLLQEVRR--GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 292 ~~~~~~~~--~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
+.+..+.. ..|...|++++|+|||++|++|+.||+|+||++...+
T Consensus 331 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 331 EMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 98877732 2378899999999999999999999999999998765
No 73
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-32 Score=243.66 Aligned_cols=242 Identities=17% Similarity=0.269 Sum_probs=204.9
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
...+.+|...|.+++|+|++++|++|+.++ |++||+.+.+.. ..+. +|...+.++.|++++..+++++.| +
T Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~s~~~d-----~ 129 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL--KTLK-GHSNYVFCCNFNPQSNLIVSGSFD-----E 129 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE--EEEE-CCSSCEEEEEECSSSSEEEEEETT-----S
T ss_pred chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE--EEEc-CCCCCEEEEEEcCCCCEEEEEeCC-----C
Confidence 355678999999999999999999998555 999999887765 5565 688899999999999999999999 9
Q ss_pred eEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEee-ccCCCceeEEEeeCCCeEEE
Q 015650 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVL 231 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (403)
.|++||+++++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+. .+...+..++|+|+++.+
T Consensus 130 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-- 207 (312)
T 4ery_A 130 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI-- 207 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEE--
T ss_pred cEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEE--
Confidence 99999999999998888 889999999999998877 48999999999988877664 345677889999988743
Q ss_pred EeeCCccCeEEEEEccCCc-eeEEeecCCceE---EEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEE
Q 015650 232 VCPGLQKGQVRVEHYASKR-TKFIMAHDSRIA---CFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIY 307 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~---~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~ 307 (403)
++ ++.|+.|++||++.++ ...+.+|..... .....+++.+|++|+.||. |++||+.+++.+..+.+ |...|.
T Consensus 208 ~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~--h~~~v~ 283 (312)
T 4ery_A 208 LA-ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL-VYIWNLQTKEIVQKLQG--HTDVVI 283 (312)
T ss_dssp EE-EETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSC-EEEEETTTCCEEEEECC--CSSCEE
T ss_pred EE-EcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCE-EEEEECCCchhhhhhhc--cCCcEE
Confidence 33 3489999999998865 445666665433 2333468899999999999 99999999999999986 678999
Q ss_pred EEEeCCCCCEEEEEe--CCCcEEEEEee
Q 015650 308 SLAFSSNAQWLAVSS--DKGTVHVFNLK 333 (403)
Q Consensus 308 ~l~~s~d~~~l~s~~--~dg~v~iwd~~ 333 (403)
+++|+|++.+|++++ .|+.|++|+.+
T Consensus 284 ~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 284 STACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999987 69999999975
No 74
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.8e-33 Score=252.64 Aligned_cols=245 Identities=13% Similarity=0.119 Sum_probs=193.7
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEc------------CCcEEEEEcCCCeeEEE--Eec--c--cCcceeEEEEeeeCCe
Q 015650 80 TSSSPPPTLLHISFNQDHGCFAAGT------------DHGFRIYNCDPFREIFR--RDF--E--RGGGIGVVEMLFRCNI 141 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~~l~~~~------------~~~i~iw~~~~~~~~~~--~~~--~--~~~~~~v~~~~~~~~~ 141 (403)
.+.+|...|.+++++ +..+++|. ++.+|+|++........ ... . ..+...+..++|+||+
T Consensus 68 ~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 467788889888764 55666653 34499999865543221 111 1 1234457788999988
Q ss_pred EE--EeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE--ecCeEEEEEcCCceeeeE--eeccCC
Q 015650 142 LA--LVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQ--IETIAN 215 (403)
Q Consensus 142 ~~--~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~--~~~~~~ 215 (403)
.+ +++++.| ++|+|||+.+++.+..+.|...|.+++|+||+.+++ .++.+++|+..+++.+.. ...|..
T Consensus 146 ~~la~as~~~d-----~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 146 TVAAIASSKVP-----AIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp SCEEEEESCSS-----CEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTE
T ss_pred CEEEEEECCCC-----CEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCC
Confidence 65 4577778 999999999999999999989999999999999988 578889999888776543 345666
Q ss_pred CceeEEEeeCCCeEEEEeeCCccC----eEEEEEccCCc-----eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 015650 216 PKGLCAVSQGVGSLVLVCPGLQKG----QVRVEHYASKR-----TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIF 286 (403)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~g~~d~----~i~v~d~~~~~-----~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iw 286 (403)
.+..++|+|++..++.++ .++ .+++|++.... ...+..|...|++++|+|||++||+|+.|+. |+||
T Consensus 221 ~v~~v~fspdg~~l~~~s---~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~-V~iw 296 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAAS---LKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS-IALV 296 (365)
T ss_dssp EEEEEEEEETTEEEEEEE---ESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC-EEEE
T ss_pred CEEEEEEcCCCCEEEEEe---cCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE-EEEE
Confidence 788999999987654443 333 68888887643 2446788999999999999999999999999 9999
Q ss_pred EcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 287 NTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 287 d~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
|+++++++..+..+ |...|++|+|+|||++||+|+.|++|+|||+...-
T Consensus 297 d~~~~~~~~~~~~g-H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 297 KLKDLSMSKIFKQA-HSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp ETTTTEEEEEETTS-SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred ECCCCcEEEEecCc-ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 99999999887543 88999999999999999999999999999997544
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.3e-32 Score=265.68 Aligned_cols=272 Identities=14% Similarity=0.216 Sum_probs=226.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCC----eeEEEEecccCccee-EEEEeeeC--CeEEEeeCCCCCCCC
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPF----REIFRRDFERGGGIG-VVEMLFRC--NILALVGGGPDPQYP 154 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~----~~~~~~~~~~~~~~~-v~~~~~~~--~~~~~~s~~~d~~~~ 154 (403)
..|.+.|.+++|+|+|++|++++++.|+||++++. +.. ..+. +|... |.+++|++ ++.++++++.|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~--~~~~-~h~~~~v~~~~~sp~~~~~~l~s~~~d---- 87 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPV--VQFT-GHGSSVVTTVKFSPIKGSQYLCSGDES---- 87 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSE--EEEC-TTTTSCEEEEEECSSTTCCEEEEEETT----
T ss_pred CCccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccc--eEEe-cCCCceEEEEEECcCCCCCEEEEecCC----
Confidence 35788999999999999999999888999999876 544 5565 78888 99999999 99999999998
Q ss_pred CceEEEEECCCC--------ceeEEEe-cCCceeEEEEecCceEEEe---c----CeEEEEEcCCceeeeEeeccCCCce
Q 015650 155 LNKVMIWDDHQS--------RCIGELS-FRSEVRSVKLRRDRIIVVL---E----QKIFVYNFADLKLLHQIETIANPKG 218 (403)
Q Consensus 155 ~~~i~iwd~~~~--------~~~~~~~-~~~~i~~~~~~~~~~~~~~---d----~~i~i~d~~~~~~~~~~~~~~~~~~ 218 (403)
|.|++||+.++ +.+..+. |...|.+++|+|++.+++. + +.|++|| .++.+..+..|...+.
T Consensus 88 -g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~ 164 (615)
T 1pgu_A 88 -GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRIN 164 (615)
T ss_dssp -SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEE
T ss_pred -CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEE
Confidence 99999999755 5666676 8999999999999998882 3 5788887 6778888889999999
Q ss_pred eEEEeeCCCeEEEEeeCCccCeEEEEEccCCc-eeEEeecCC---ceEEEEEcCC-CCEEEEEeCCCcEEEEEEcCCCcE
Q 015650 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDS---RIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTL 293 (403)
Q Consensus 219 ~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~---~i~~~~~sp~-g~~l~s~~~dg~~i~iwd~~~~~~ 293 (403)
.++|+++++.+++. ++.|+.|++||++..+ ...+..|.. .|.+++|+|+ +++|++++.|+. |++||+.+++.
T Consensus 165 ~~~~~~~~~~~l~~--~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~ 241 (615)
T 1pgu_A 165 ACHLKQSRPMRSMT--VGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK-ISCFDGKSGEF 241 (615)
T ss_dssp EEEECSSSSCEEEE--EETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC-EEEEETTTCCE
T ss_pred EEEECCCCCcEEEE--EeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe-EEEEECCCCCE
Confidence 99999998754443 3589999999998855 456778888 9999999999 999999999999 99999999999
Q ss_pred EEEEecC--CCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeee
Q 015650 294 LQEVRRG--ADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEW 371 (403)
Q Consensus 294 ~~~~~~~--~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (403)
+..+... .|...|.+++|+ ++++|++++.||.|++||+++++..
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~--------------------------------- 287 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV--------------------------------- 287 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE---------------------------------
T ss_pred eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE---------------------------------
Confidence 9888320 277899999999 9999999999999999999987632
Q ss_pred eeEEEEEe----CCCceEEEeccCCCEEEEEccCCC
Q 015650 372 SVAQFRLV----EGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 372 ~~~~~~~~----~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
..+..+ ...+..+.|+ ++++|++++.||+
T Consensus 288 --~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~ 320 (615)
T 1pgu_A 288 --QKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGT 320 (615)
T ss_dssp --EEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSC
T ss_pred --EEEcCCCCcccCceeEEEeC-CCCeEEEEECCCC
Confidence 222332 2345566765 7888888888774
No 76
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.6e-32 Score=250.33 Aligned_cols=271 Identities=14% Similarity=0.269 Sum_probs=219.5
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 81 SSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
..+|...|.+++| ++++|++|+.+ .|++||+.+++.. ..+. +|...|.++.| ++..+++++.| |.|+
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~--~~~~-~h~~~v~~l~~--~~~~l~sg~~d-----g~i~ 196 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECK--RILT-GHTGSVLCLQY--DERVIITGSSD-----STVR 196 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEE--EEEC-CCSSCEEEEEC--CSSEEEEEETT-----SCEE
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEE--EEEc-CCCCcEEEEEE--CCCEEEEEcCC-----CeEE
Confidence 3457788999887 78999999855 5999999887765 5565 78899999999 55577888888 9999
Q ss_pred EEECCCCceeEEEe-cCCceeEEEEecCceEEE-ecCeEEEEEcCCceee---eEeeccCCCceeEEEeeCCCeEEEEee
Q 015650 160 IWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLL---HQIETIANPKGLCAVSQGVGSLVLVCP 234 (403)
Q Consensus 160 iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (403)
+||+.+++.+..+. |...|.+++|+++..+.+ .|+.|++||+++++.. ..+.+|...+..+++ +++ ++++
T Consensus 197 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~--~l~s- 271 (435)
T 1p22_A 197 VWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK--YIVS- 271 (435)
T ss_dssp EEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT--EEEE-
T ss_pred EEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC--EEEE-
Confidence 99999999999988 899999999986532222 5899999999987655 566778888777777 444 3343
Q ss_pred CCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCC
Q 015650 235 GLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (403)
Q Consensus 235 g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 313 (403)
|+.|+.|++||++++. ...+..|...|.++.| ++++|++|+.||. |++||+++++++..+.. |...|.+++|
T Consensus 272 ~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~~~~-- 344 (435)
T 1p22_A 272 ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT-IRLWDIECGACLRVLEG--HEELVRCIRF-- 344 (435)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECC--CSSCEEEEEC--
T ss_pred EeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-EEEEECCCCCEEEEEeC--CcCcEEEEEe--
Confidence 3479999999998854 5567889999999999 5789999999999 99999999999999986 7789999999
Q ss_pred CCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCC
Q 015650 314 NAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKN 393 (403)
Q Consensus 314 d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~ 393 (403)
++.+|++|+.||.|++||+.+++...... ....+..+..|.+.|.+++| +++
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~--------------------------~~~~~~~~~~h~~~v~~l~~--~~~ 396 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVAALDPRAPA--------------------------GTLCLRTLVEHSGRVFRLQF--DEF 396 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHHHTSTTSCT--------------------------TTTEEEEECCCSSCCCCEEE--CSS
T ss_pred cCCEEEEEeCCCcEEEEECCCCCCccccc--------------------------cchheeeccCCCCCeEEEEe--CCC
Confidence 78999999999999999998876321110 00124446678889999999 889
Q ss_pred EEEEEccCCC
Q 015650 394 TVVILGMDGR 403 (403)
Q Consensus 394 ~l~~~~~dG~ 403 (403)
+|++|+.||+
T Consensus 397 ~l~s~s~Dg~ 406 (435)
T 1p22_A 397 QIVSSSHDDT 406 (435)
T ss_dssp CEEECCSSSE
T ss_pred EEEEEeCCCE
Confidence 9999999984
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.2e-32 Score=262.93 Aligned_cols=277 Identities=10% Similarity=0.175 Sum_probs=220.3
Q ss_pred cccCCCCC---CeEEEEEcCC-CCEEEEEcC-CcEEEEEcCCCeeEEEEeccc---CcceeEEEEeeeCCeEEEeeCCCC
Q 015650 79 STSSSPPP---TLLHISFNQD-HGCFAAGTD-HGFRIYNCDPFREIFRRDFER---GGGIGVVEMLFRCNILALVGGGPD 150 (403)
Q Consensus 79 ~~~~~~~~---~i~~i~~s~d-~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~s~~~d 150 (403)
..+.+|.. .|.+++|+|+ +++|++++. +.|++||+.+++.. ..+.. .|...+.++.|+ ++..+++++.|
T Consensus 197 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d 273 (615)
T 1pgu_A 197 ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL--KYIEDDQEPVQGGIFALSWL-DSQKFATVGAD 273 (615)
T ss_dssp EEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE--EECCBTTBCCCSCEEEEEES-SSSEEEEEETT
T ss_pred eeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe--EEecccccccCCceEEEEEc-CCCEEEEEcCC
Confidence 45677888 9999999999 999999884 55999999887765 44522 588899999999 88889999888
Q ss_pred CCCCCceEEEEECCCCceeEEEe-c----CCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEE
Q 015650 151 PQYPLNKVMIWDDHQSRCIGELS-F----RSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAV 222 (403)
Q Consensus 151 ~~~~~~~i~iwd~~~~~~~~~~~-~----~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 222 (403)
+.|++||+.+++.+..+. + ...+.++.|. ++.+++ .|+.|++||+.+++.+..+..|...+..+++
T Consensus 274 -----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 347 (615)
T 1pgu_A 274 -----ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV 347 (615)
T ss_dssp -----SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET
T ss_pred -----CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe
Confidence 999999999999988887 3 3677888886 444444 4899999999888777777665554444333
Q ss_pred eeC---------------------------------CCeE----------------------------------------
Q 015650 223 SQG---------------------------------VGSL---------------------------------------- 229 (403)
Q Consensus 223 ~~~---------------------------------~~~~---------------------------------------- 229 (403)
++ ++.+
T Consensus 348 -~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 426 (615)
T 1pgu_A 348 -NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTND 426 (615)
T ss_dssp -TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETT
T ss_pred -cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCC
Confidence 21 1111
Q ss_pred -------------------------------EEEeeCCc-cCeEEEEEccCCce--eEEeecCCceEEEEEcCCCCEEEE
Q 015650 230 -------------------------------VLVCPGLQ-KGQVRVEHYASKRT--KFIMAHDSRIACFALTQDGQLLAT 275 (403)
Q Consensus 230 -------------------------------~~~~~g~~-d~~i~v~d~~~~~~--~~~~~~~~~i~~~~~sp~g~~l~s 275 (403)
++++ +.. ++.|++||+..+.. ..+..|...|.+++|+|++++|++
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 505 (615)
T 1pgu_A 427 DDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAV-GLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA 505 (615)
T ss_dssp SEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEE-EETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEE
T ss_pred CceEEEeccCCceeeecccCCCceEEEEcCCEEEE-eecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEE
Confidence 1222 224 77788888777555 455678999999999999999999
Q ss_pred EeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCC----------CCCEEEEEeCCCcEEEEEeecCCCCCCCCCCC
Q 015650 276 SSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS----------NAQWLAVSSDKGTVHVFNLKVNSGSARSEPRS 345 (403)
Q Consensus 276 ~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~----------d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 345 (403)
++.|+. |++||+.+++.+..+... |...|++++|+| ++++|++++.||.|++||++++..
T Consensus 506 ~~~dg~-i~iw~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-------- 575 (615)
T 1pgu_A 506 GDVMGK-ILLYDLQSREVKTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK-------- 575 (615)
T ss_dssp EETTSC-EEEEETTTTEEEECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC--------
T ss_pred cCCCCe-EEEeeCCCCcceeEeecC-CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCce--------
Confidence 999999 999999999998877642 678999999999 999999999999999999998742
Q ss_pred CCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 346 TSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
.+..+..|.+.|+.++|+||++ |++++.||+
T Consensus 576 --------------------------~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~ 606 (615)
T 1pgu_A 576 --------------------------IIKALNAHKDGVNNLLWETPST-LVSSGADAC 606 (615)
T ss_dssp --------------------------CEEETTSSTTCEEEEEEEETTE-EEEEETTSC
T ss_pred --------------------------echhhhcCccceEEEEEcCCCC-eEEecCCce
Confidence 0223456678999999999999 999999985
No 78
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-32 Score=270.56 Aligned_cols=239 Identities=11% Similarity=0.107 Sum_probs=191.0
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceE
Q 015650 80 TSSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (403)
...+|...|++++|+|++++||+|+.+ .|+||+....+.. ..+. |...|.++.|++ +.++++++.| +.|
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~--~~~~--~~~~V~~l~fsp-g~~L~S~s~D-----~~v 81 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVV--IKLE--DRSAIKEMRFVK-GIYLVVINAK-----DTV 81 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEE--EECS--SCCCEEEEEEET-TTEEEEEETT-----CEE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEE--EEcC--CCCCEEEEEEcC-CCEEEEEECc-----CeE
Confidence 345799999999999999999999855 4999998766544 3443 778899999999 6688888888 999
Q ss_pred EEEECCCCceeEEEecCCceeEEEEecCceEEE---ecCeEEEEEcCCceee-----------eEeeccCCCceeEEEee
Q 015650 159 MIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLL-----------HQIETIANPKGLCAVSQ 224 (403)
Q Consensus 159 ~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~-----------~~~~~~~~~~~~~~~~~ 224 (403)
++||+.+++++..+.+...|.+++|+|++.+++ .||+|++||++++++. ..+..|...+..++|+|
T Consensus 82 ~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 82 YVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 999999999999998889999999999999888 4999999999987753 23356778999999999
Q ss_pred CCCeEEEEeeCCccCeEEEEEccCCce-eEEeec------------------CCceEEEEEcCCCCEEEEEeCCCcEEEE
Q 015650 225 GVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMAH------------------DSRIACFALTQDGQLLATSSTKGTLVRI 285 (403)
Q Consensus 225 ~~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~~~------------------~~~i~~~~~sp~g~~l~s~~~dg~~i~i 285 (403)
++...+++ |+.|+.| +||++.++. ..+..| ...|.+++|+|+|++|++++.|+. |++
T Consensus 162 ~~~~~l~~--g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~-i~l 237 (902)
T 2oaj_A 162 RDIGTVLI--SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS-LVF 237 (902)
T ss_dssp TEEEEEEE--ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC-EEE
T ss_pred CCCCEEEE--EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe-EEE
Confidence 75444333 4589999 999998654 344444 477999999999999999999999 999
Q ss_pred EEcCCCcEEEE--Ee---cC-----------CCcccEEEEEeC----CCC-CEEEEEeCC-----CcEEEEEe
Q 015650 286 FNTLDGTLLQE--VR---RG-----------ADRAEIYSLAFS----SNA-QWLAVSSDK-----GTVHVFNL 332 (403)
Q Consensus 286 wd~~~~~~~~~--~~---~~-----------~~~~~v~~l~~s----~d~-~~l~s~~~d-----g~v~iwd~ 332 (403)
||+++++++.. +. .+ .|...|++++|+ |++ .+|++|+.| ..+++|++
T Consensus 238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred EECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 99999988754 21 11 134579999995 554 466777655 36788875
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.1e-32 Score=250.03 Aligned_cols=248 Identities=13% Similarity=0.157 Sum_probs=205.2
Q ss_pred ccccCCCCCCeEEEEEcCC----C---CEEEEEc-CCcEEEEEcCCCee---EEEEecccCc-----ceeEEEEeee---
Q 015650 78 ESTSSSPPPTLLHISFNQD----H---GCFAAGT-DHGFRIYNCDPFRE---IFRRDFERGG-----GIGVVEMLFR--- 138 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d----~---~~l~~~~-~~~i~iw~~~~~~~---~~~~~~~~~~-----~~~v~~~~~~--- 138 (403)
...+.+|...|++++|+|+ + ++|++++ ++.|++|++.+.+. .....+. .| ...+.++.|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp EEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC
T ss_pred ceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeecc
Confidence 3456689999999999999 9 9999988 55599999976654 1124444 45 5899999999
Q ss_pred -CCeEE-EeeCCCCCCCCCceEEEEECCC------CceeE-----EEe--------cCCceeEEEEecCceEEE---ecC
Q 015650 139 -CNILA-LVGGGPDPQYPLNKVMIWDDHQ------SRCIG-----ELS--------FRSEVRSVKLRRDRIIVV---LEQ 194 (403)
Q Consensus 139 -~~~~~-~~s~~~d~~~~~~~i~iwd~~~------~~~~~-----~~~--------~~~~i~~~~~~~~~~~~~---~d~ 194 (403)
+++.. +++++.+ |.|++||+.+ ++.+. .+. |...|.+++|+|++ +++ .|+
T Consensus 134 ~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg 207 (397)
T 1sq9_A 134 DRLLSHRLVATDVK-----GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG 207 (397)
T ss_dssp ----CEEEEEEETT-----SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS
T ss_pred CCCCceEEEEEeCC-----CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC
Confidence 99988 9999888 9999999998 66665 652 68899999999999 666 489
Q ss_pred eEEEEEcCCceeeeEeec---c---CCCceeEEEeeCCCeEEEEeeCCcc---CeEEEEEccCCc-eeEEee--------
Q 015650 195 KIFVYNFADLKLLHQIET---I---ANPKGLCAVSQGVGSLVLVCPGLQK---GQVRVEHYASKR-TKFIMA-------- 256 (403)
Q Consensus 195 ~i~i~d~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~g~~d---~~i~v~d~~~~~-~~~~~~-------- 256 (403)
.|++||+++++.+..+.. | ...+..++|+++++.+ ++ ++.| +.|++||+++.. +..+..
T Consensus 208 ~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l--~~-~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~ 284 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL--AI-AHDSNSFGCITLYETEFGERIGSLSVPTHSSQAS 284 (397)
T ss_dssp EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEE--EE-EEEETTEEEEEEEETTTCCEEEEECBC-------
T ss_pred cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEE--EE-EecCCCCceEEEEECCCCcccceeccCccccccc
Confidence 999999999999999988 8 8899999999998743 33 3478 999999998754 455666
Q ss_pred -----cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecC----CC---------------cccEEEEEeC
Q 015650 257 -----HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG----AD---------------RAEIYSLAFS 312 (403)
Q Consensus 257 -----~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~----~~---------------~~~v~~l~~s 312 (403)
|...|.+++|+|++++|++++.|+. |+|||+.+++++..+... .| ...|++++|+
T Consensus 285 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 363 (397)
T 1sq9_A 285 LGEFAHSSWVMSLSFNDSGETLCSAGWDGK-LRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 363 (397)
T ss_dssp -CCBSBSSCEEEEEECSSSSEEEEEETTSE-EEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEE
T ss_pred ccccccCCcEEEEEECCCCCEEEEEeCCCe-EEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEec
Confidence 9999999999999999999999999 999999999999999811 14 7899999999
Q ss_pred CCC----------CEEEEEeCCCcEEEEEeecCC
Q 015650 313 SNA----------QWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 313 ~d~----------~~l~s~~~dg~v~iwd~~~~~ 336 (403)
|++ ++|++++.||.|++|++++++
T Consensus 364 ~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 364 KKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 998 799999999999999999864
No 80
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.4e-31 Score=245.84 Aligned_cols=268 Identities=19% Similarity=0.270 Sum_probs=221.4
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
....+.+|...|.+++|+ +.+|++|+ |+.|++|++.+++.. ..+. +|...+.++.++++. +++++.|
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~~~~~--l~s~s~d----- 218 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECI--HTLY-GHTSTVRCMHLHEKR--VVSGSRD----- 218 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEEETTE--EEEEETT-----
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEE--EEEC-CCCCcEEEEEecCCE--EEEEeCC-----
Confidence 345678899999999997 56888887 555999999888765 5565 788899999997664 6666777
Q ss_pred ceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEE
Q 015650 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (403)
|.|++||+.+++.+..+. |...|.++.+ ++.+++ .|+.|++||+++++.+..+..|...+..+.+ ++.. +
T Consensus 219 g~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~--l 292 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIH--V 292 (445)
T ss_dssp SEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSE--E
T ss_pred CEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCE--E
Confidence 999999999999999888 8999999999 444444 4899999999999999999988888888777 5443 3
Q ss_pred EeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecC-CCcccEEEE
Q 015650 232 VCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG-ADRAEIYSL 309 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~-~~~~~v~~l 309 (403)
++ ++.|+.|++||++++. ...+.+|...+.++.+ ++++|++++.||. |++||+++++.+..+..+ .|...|.++
T Consensus 293 ~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 293 VS-GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCL 368 (445)
T ss_dssp EE-EETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECSTTSCSSCEEEE
T ss_pred EE-EeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCe-EEEEECCCCcEEEEEccCCCCCCCEEEE
Confidence 43 3489999999998855 5567789999998887 5679999999999 999999999999988753 266889999
Q ss_pred EeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEE-----EEeCCCce
Q 015650 310 AFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQF-----RLVEGSPY 384 (403)
Q Consensus 310 ~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 384 (403)
+|+ +++|++++.||.|++||+.+++.. ..+ ..+.+.+.
T Consensus 369 ~~~--~~~l~s~~~dg~v~iwd~~~~~~~-----------------------------------~~~~~~~~~~~~~~v~ 411 (445)
T 2ovr_B 369 QFN--KNFVITSSDDGTVKLWDLKTGEFI-----------------------------------RNLVTLESGGSGGVVW 411 (445)
T ss_dssp EEC--SSEEEEEETTSEEEEEETTTCCEE-----------------------------------EEEEECTTGGGTCEEE
T ss_pred EEC--CCEEEEEeCCCeEEEEECCCCcee-----------------------------------eeeeccccCCCCceEE
Confidence 995 689999999999999999988731 112 23456899
Q ss_pred EEEeccCCCEEEEEccCCC
Q 015650 385 IVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 385 ~~~fs~d~~~l~~~~~dG~ 403 (403)
.++|+|++..|++|+.||+
T Consensus 412 ~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 412 RIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEECSSEEEEEEECSSSS
T ss_pred EEEecCCEEEEEEcccCCC
Confidence 9999999999999999985
No 81
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1e-32 Score=248.97 Aligned_cols=238 Identities=13% Similarity=0.179 Sum_probs=200.6
Q ss_pred CCCCCeEEEEEcCC----CCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCc
Q 015650 83 SPPPTLLHISFNQD----HGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLN 156 (403)
Q Consensus 83 ~~~~~i~~i~~s~d----~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~ 156 (403)
.|...|++++|+|+ +++|++|+.++ |++|++.+.+.. ..+. +|...|.++.|++ ++..+++++.| |
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~-~~~~~i~~~~~~~~~~~~l~s~~~d-----g 138 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCI--KHYV-GHGNAINELKFHPRDPNLLLSVSKD-----H 138 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEE--EEEE-SCCSCEEEEEECSSCTTEEEEEETT-----S
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEe--eeec-CCCCcEEEEEECCCCCCEEEEEeCC-----C
Confidence 47789999999999 67899888555 999999887765 4565 6889999999999 88899999988 9
Q ss_pred eEEEEECCCCceeEEE---e-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeec-----------------
Q 015650 157 KVMIWDDHQSRCIGEL---S-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIET----------------- 212 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~---~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~----------------- 212 (403)
.|++||+.+++.+..+ . |...|.+++|+|++.+++ .|+.|++||+++++.+..+..
T Consensus 139 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (366)
T 3k26_A 139 ALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQK 218 (366)
T ss_dssp CEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEE
T ss_pred eEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccccccee
Confidence 9999999999999888 4 899999999999998877 489999999998766544433
Q ss_pred -----------cCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc---------------eeEEeecCCceEEEEE
Q 015650 213 -----------IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR---------------TKFIMAHDSRIACFAL 266 (403)
Q Consensus 213 -----------~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~---------------~~~~~~~~~~i~~~~~ 266 (403)
|...+..++++ ++ ++++ ++.|+.|++||++... ...+..|...|.+++|
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~~~--~~--~l~~-~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 293 (366)
T 3k26_A 219 IHFPDFSTRDIHRNYVDCVRWL--GD--LILS-KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 293 (366)
T ss_dssp ECCCSEEECSSCSSCCCEEEEE--TT--EEEE-ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCC
T ss_pred eccCccccccCCcceEEEEEEc--CC--EEEE-EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEE
Confidence 78888999998 44 3444 3479999999988742 4556789999999999
Q ss_pred cCC--CCEEEEEeCCCcEEEEEEcCCCc----EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeec
Q 015650 267 TQD--GQLLATSSTKGTLVRIFNTLDGT----LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 267 sp~--g~~l~s~~~dg~~i~iwd~~~~~----~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~ 334 (403)
+|+ +++|++++.||. |++||+.+++ ....+..+.|...|++++|+|++++|++++.||.|++||+.+
T Consensus 294 s~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 294 SMDFWQKMLALGNQVGK-LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EECTTSSEEEEECTTSC-EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cCCCCCcEEEEEecCCc-EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 999 999999999999 9999999875 445676644478999999999999999999999999999864
No 82
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.6e-32 Score=282.93 Aligned_cols=310 Identities=15% Similarity=0.185 Sum_probs=235.1
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeC--CeEEEeeCCCCCCCC
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC--NILALVGGGPDPQYP 154 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~~~ 154 (403)
...+.+|...|.+++|+|+|++|++++.+ .|+|||+.+++.. ..+. +|...+.++.|++ +...+++++.|
T Consensus 650 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~d---- 722 (1249)
T 3sfz_A 650 LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV--HTYD-EHSEQVNCCHFTNKSNHLLLATGSND---- 722 (1249)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE--EEEE-CCSSCEEEEEECSSSSCCEEEEEETT----
T ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceE--EEEc-CCCCcEEEEEEecCCCceEEEEEeCC----
Confidence 35677899999999999999999999854 5999999988765 5565 6889999999998 66788999988
Q ss_pred CceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEee-------------------
Q 015650 155 LNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIE------------------- 211 (403)
Q Consensus 155 ~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~------------------- 211 (403)
+.|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++....+.
T Consensus 723 -~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 801 (1249)
T 3sfz_A 723 -FFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIV 801 (1249)
T ss_dssp -SCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCB
T ss_pred -CeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceE
Confidence 999999999999999888 999999999999998887 48999999998765544332
Q ss_pred ------------------------------------ccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc-eeEE
Q 015650 212 ------------------------------------TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFI 254 (403)
Q Consensus 212 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~ 254 (403)
.|...+..+++++++..+ ++ ++.++.|++||+.++. ...+
T Consensus 802 ~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l--~~-~~~dg~v~vwd~~~~~~~~~~ 878 (1249)
T 3sfz_A 802 KCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLA--VI-ALSQYCVELWNIDSRLKVADC 878 (1249)
T ss_dssp CCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEE--EE-ECSSSCEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEE--EE-EeCCCeEEEEEcCCCceeeec
Confidence 445667788888887743 33 3478999999998854 4557
Q ss_pred eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCC--------------------------------------------
Q 015650 255 MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD-------------------------------------------- 290 (403)
Q Consensus 255 ~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~-------------------------------------------- 290 (403)
.+|...|.+++|+|+|++|++++.|+. |++||+.+
T Consensus 879 ~~h~~~v~~v~~spdg~~l~s~s~dg~-v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1249)
T 3sfz_A 879 RGHLSWVHGVMFSPDGSSFLTASDDQT-IRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQID 957 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEE
T ss_pred CCCccceEEEEECCCCCEEEEEeCCCe-EEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEE
Confidence 789999999999999999999999988 88888531
Q ss_pred -----------------------------------CcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecC
Q 015650 291 -----------------------------------GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (403)
Q Consensus 291 -----------------------------------~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~ 335 (403)
++.+..+. .|...|++++|+|+|++|++++.||.|++||+.++
T Consensus 958 ~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~--~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 958 YLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGV--GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp EECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECC--CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTT
T ss_pred EcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecc--cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 22222232 26678999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCCC-CCcccccccccccccceeeeeee------eEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 336 SGSARSEPRSTSDP-TLPTSSLSFIKGVLPKYFSSEWS------VAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 336 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+...... +..... ........++.... ...-..|+ ...+..|.+.+..++|+||+++|++++.||+
T Consensus 1036 ~~~~~~~-~~~~v~~~~~~~~~~l~~~~~-dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~ 1108 (1249)
T 3sfz_A 1036 DYVFLQA-HQETVKDFRLLQDSRLLSWSF-DGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKT 1108 (1249)
T ss_dssp EEECCBC-CSSCEEEEEECSSSEEEEEES-SSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSC
T ss_pred ceEEEec-CCCcEEEEEEcCCCcEEEEEC-CCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCc
Confidence 7543222 111111 00011111111000 00011222 3457778889999999999999999999985
No 83
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-31 Score=246.96 Aligned_cols=272 Identities=8% Similarity=0.055 Sum_probs=214.4
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCe---eEEEEecc-------------------------------------
Q 015650 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFR---EIFRRDFE------------------------------------- 125 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~---~~~~~~~~------------------------------------- 125 (403)
.++.+++|+++|++|+++.++.|++|++.+++ .+......
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 47889999999999888888889999998776 32111100
Q ss_pred --------------cCcceeEEEEeeeCCeEEE-eeCCCCCCCCCceEEEEECC--CCceeEEEe---cCCceeEEEEec
Q 015650 126 --------------RGGGIGVVEMLFRCNILAL-VGGGPDPQYPLNKVMIWDDH--QSRCIGELS---FRSEVRSVKLRR 185 (403)
Q Consensus 126 --------------~~~~~~v~~~~~~~~~~~~-~s~~~d~~~~~~~i~iwd~~--~~~~~~~~~---~~~~i~~~~~~~ 185 (403)
..+...|.+++|++++..| ++++.| |.|++||+. +++.+..+. +...|.+++|+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCC-----CeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 0122369999999999885 888888 999999999 888888774 678999999999
Q ss_pred CceEEE---ecCeEEEEEcCCceeee----EeeccCCCceeEEEeeC---CCeEEEEeeCCccCeEEEEEccCCce-eE-
Q 015650 186 DRIIVV---LEQKIFVYNFADLKLLH----QIETIANPKGLCAVSQG---VGSLVLVCPGLQKGQVRVEHYASKRT-KF- 253 (403)
Q Consensus 186 ~~~~~~---~d~~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~d~~i~v~d~~~~~~-~~- 253 (403)
++.+++ .++.|++|++.+++... .+..|...+..++|+|+ +. ++++ ++.|+.|++||++.+.. ..
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~--~l~s-~~~d~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ--FIIT-SDRDEHIKISHYPQCFIVDKW 236 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE--EEEE-EETTSCEEEEEESCTTCEEEE
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc--EEEE-EcCCCcEEEEECCCCceeeee
Confidence 998887 37899999998876554 67788999999999998 43 3444 34899999999988654 33
Q ss_pred EeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecC-----------------------CCcccEEEEE
Q 015650 254 IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG-----------------------ADRAEIYSLA 310 (403)
Q Consensus 254 ~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~-----------------------~~~~~v~~l~ 310 (403)
+.+|...|.+++|+ ++++|++++.|+. |+|||+.+++++..+..+ .....|.+++
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d~~-v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGDDK-IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESSSE-EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCCCe-EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 45899999999999 9999999999999 999999999998888632 1235799999
Q ss_pred eCCCCCEEEEEe-CCCcEEEEEe--ecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEE
Q 015650 311 FSSNAQWLAVSS-DKGTVHVFNL--KVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVA 387 (403)
Q Consensus 311 ~s~d~~~l~s~~-~dg~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (403)
|+|++++|++++ .|+.|+||++ .++.. ...+..+..+ +.+..++
T Consensus 315 ~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~--------------------------------l~~~~~~~~~-~~v~~~~ 361 (450)
T 2vdu_B 315 KSKNLPFVAFFVEATKCIIILEMSEKQKGD--------------------------------LALKQIITFP-YNVISLS 361 (450)
T ss_dssp ECSSSSEEEEEETTCSEEEEEEECSSSTTC--------------------------------EEEEEEEECS-SCEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEEeccCCCCc--------------------------------eeeccEeccC-CceEEEE
Confidence 999999999998 8999999999 33321 0113345555 7899999
Q ss_pred eccCCCEEEEEcc
Q 015650 388 FGHQKNTVVILGM 400 (403)
Q Consensus 388 fs~d~~~l~~~~~ 400 (403)
|+|++.++++++.
T Consensus 362 ~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 362 AHNDEFQVTLDNK 374 (450)
T ss_dssp EETTEEEEEECCT
T ss_pred ecCCcEEEEEecc
Confidence 9996544444443
No 84
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.8e-31 Score=232.91 Aligned_cols=244 Identities=12% Similarity=0.159 Sum_probs=206.9
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceE
Q 015650 80 TSSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (403)
...+|...|++++|+|++++|++|+.+ .|+||++++++.. ..+. +|...+..+.+.+. .+++++.+ +.+
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~--~~~~-~h~~~~~~~~~~~~--~l~s~~~~-----~~~ 131 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL--RNMT-SHSARVGSLSWNSY--ILSSGSRS-----GHI 131 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEEETT--EEEEEETT-----SEE
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE--EEec-CccceEEEeecCCC--EEEEEecC-----Cce
Confidence 356788899999999999999999855 5999999988766 5555 68888888777665 56667777 999
Q ss_pred EEEECCCCc-eeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCcee----eeEeeccCCCceeEEEeeCCCeE
Q 015650 159 MIWDDHQSR-CIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKL----LHQIETIANPKGLCAVSQGVGSL 229 (403)
Q Consensus 159 ~iwd~~~~~-~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 229 (403)
++|+...+. .+..+. |...+..+.+.+++.+++ .|+.|++||+++++. ......+...+..+.+.+.+..+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 211 (318)
T 4ggc_A 132 HHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 211 (318)
T ss_dssp EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTE
T ss_pred EeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcE
Confidence 999988764 445555 899999999999998888 489999999988653 34445567788889999988887
Q ss_pred EEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEe--CCCcEEEEEEcCCCcEEEEEecCCCcccEE
Q 015650 230 VLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS--TKGTLVRIFNTLDGTLLQEVRRGADRAEIY 307 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~--~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~ 307 (403)
+...+++.++.|++||.+.........+...+..+.|+|++..+++++ .|+. |+|||+++++++.++.+ |.+.|+
T Consensus 212 ~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~-i~iwd~~~~~~~~~l~g--H~~~V~ 288 (318)
T 4ggc_A 212 LATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELKG--HTSRVL 288 (318)
T ss_dssp EEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEECC--CSSCEE
T ss_pred EEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCE-EEEEECCCCcEEEEEcC--CCCCEE
Confidence 776678899999999999988888888899999999999999887755 7899 99999999999999986 778999
Q ss_pred EEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 308 SLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 308 ~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
+++|+|||++|++|+.||+|+|||+.+.+
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 99999999999999999999999997654
No 85
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-31 Score=267.35 Aligned_cols=310 Identities=14% Similarity=0.079 Sum_probs=207.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEE---------EecccCcceeEEEEeeeCC-eEEEeeCCCCCC
Q 015650 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFR---------RDFERGGGIGVVEMLFRCN-ILALVGGGPDPQ 152 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~---------~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~ 152 (403)
|...|++++|+|++++|++|+.++ |++||+++.+.... ..+ .+|...|.+++|+|+ ...+++++.|
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~-~~h~~~V~sl~~sp~~~~~l~~g~~d-- 173 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFP-AARLSPIVSIQWNPRDIGTVLISYEY-- 173 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCS-SSCCCCCCEEEEETTEEEEEEEECSS--
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccccccc-ccCCCCeEEEEEccCCCCEEEEEeCC--
Confidence 667899999999999999998555 99999987764311 122 368889999999996 4677788888
Q ss_pred CCCceEEEEECCCCceeEEEe-c------------------CCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeE-
Q 015650 153 YPLNKVMIWDDHQSRCIGELS-F------------------RSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQ- 209 (403)
Q Consensus 153 ~~~~~i~iwd~~~~~~~~~~~-~------------------~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~- 209 (403)
+.| +||+++++.+..+. | ...|.+++|+|++.+++ .|++|++||+++++++..
T Consensus 174 ---g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r 249 (902)
T 2oaj_A 174 ---VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMAR 249 (902)
T ss_dssp ---CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred ---CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEE
Confidence 999 99999999888876 3 36799999999999888 499999999998877653
Q ss_pred -ee---cc-------------CCCceeEEEeeCC--C-eEEEEeeC----------------------------------
Q 015650 210 -IE---TI-------------ANPKGLCAVSQGV--G-SLVLVCPG---------------------------------- 235 (403)
Q Consensus 210 -~~---~~-------------~~~~~~~~~~~~~--~-~~~~~~~g---------------------------------- 235 (403)
+. .| ...+..++|++.. + ..+++++|
T Consensus 250 ~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~ 329 (902)
T 2oaj_A 250 TVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYA 329 (902)
T ss_dssp CSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHH
T ss_pred eecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhc
Confidence 21 12 2346677775421 1 12222221
Q ss_pred -----------------------------------------CccCeEEEEEccCCcee-E--------------------
Q 015650 236 -----------------------------------------LQKGQVRVEHYASKRTK-F-------------------- 253 (403)
Q Consensus 236 -----------------------------------------~~d~~i~v~d~~~~~~~-~-------------------- 253 (403)
+.|+.|++||+..+... .
T Consensus 330 ~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~ 409 (902)
T 2oaj_A 330 NPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMA 409 (902)
T ss_dssp SCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEE
T ss_pred CccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEE
Confidence 12355666665432110 0
Q ss_pred ---------------------EeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEE----EEEec-----CCCc
Q 015650 254 ---------------------IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLL----QEVRR-----GADR 303 (403)
Q Consensus 254 ---------------------~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~----~~~~~-----~~~~ 303 (403)
+.+|...+.+++|+|++++|++|+.|++ |++||+.++... ..+.. ..|.
T Consensus 410 s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~Dgt-VrlWd~~~g~~~~~~~~~~~l~~~~~~~h~ 488 (902)
T 2oaj_A 410 ASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGS-VRIYDASHGDIQDNASFEVNLSRTLNKAKE 488 (902)
T ss_dssp EEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSE-EEEEESSCCTTTTTBCEEEEHHHHTTCSSS
T ss_pred EEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCc-EEEEECCCccccCCceEEeechhhcCCCCC
Confidence 1122333444556789999999999999 999999877421 11111 1377
Q ss_pred ccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCC----------CCCCCCCCCCCcccccccc-cccccceeeeeee
Q 015650 304 AEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR----------SEPRSTSDPTLPTSSLSFI-KGVLPKYFSSEWS 372 (403)
Q Consensus 304 ~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 372 (403)
..|++++|+|||++||+|+.||+|+|||+.+++.... ++...-....... ...++ .+..+.+...-..
T Consensus 489 ~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ 567 (902)
T 2oaj_A 489 LAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNG-VLVDVRDRAPTGVRQGFMP 567 (902)
T ss_dssp CCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSC-SEEECGGGCCTTCSEEEEE
T ss_pred CceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcc-ccccccccCCCCCCCccce
Confidence 8999999999999999999999999999998753110 0000000000000 00000 0011111111122
Q ss_pred eEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 373 VAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 373 ~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+..+++|.+.|+.|+||||| +||+|+.||+
T Consensus 568 ~~~l~~h~~~V~svafSpdG-~lAsgs~D~t 597 (902)
T 2oaj_A 568 STAVHANKGKTSAINNSNIG-FVGIAYAAGS 597 (902)
T ss_dssp EEEECCCSCSEEEEEECBTS-EEEEEETTSE
T ss_pred eEEEEcCCCcEEEEEecCCc-EEEEEeCCCc
Confidence 45567789999999999999 9999999984
No 86
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.5e-30 Score=241.45 Aligned_cols=264 Identities=16% Similarity=0.279 Sum_probs=216.6
Q ss_pred cccCCCCCCe-EEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 79 STSSSPPPTL-LHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 79 ~~~~~~~~~i-~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
..+.+|.+.| .+ +.++|++|++|+.+ .|++|++.+++.. ..+. +|...|.++.++++ .+++++.| |
T Consensus 112 ~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~~~~--~l~s~~~d-----g 179 (445)
T 2ovr_B 112 KVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCL--RTLV-GHTGGVWSSQMRDN--IIISGSTD-----R 179 (445)
T ss_dssp EEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEE--EECC-CCSSCEEEEEEETT--EEEEEETT-----S
T ss_pred EEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEE--EEEc-CCCCCEEEEEecCC--EEEEEeCC-----C
Confidence 5677898875 55 44568999999855 5999999887765 6676 78999999999855 66777777 9
Q ss_pred eEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE-ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEee
Q 015650 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (403)
.|++||+.+++.+..+. |...|.++.++++....+ .|++|++||+++++.+..+..|...+..+.+ +++. +++
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~--l~~- 254 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRR--VVS- 254 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSC--EEE-
T ss_pred eEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCE--EEE-
Confidence 99999999999999988 999999999976553333 5999999999999999999999888888877 4543 333
Q ss_pred CCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCC
Q 015650 235 GLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (403)
Q Consensus 235 g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 313 (403)
|+.|+.|++||++++. ...+.+|...|.++.| ++.+|++++.|+. |++||+++++.+..+.. |...+.++.+
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~~~~v~~~~~-- 327 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-IRVWDVETGNCIHTLTG--HQSLTSGMEL-- 327 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-EEEEETTTCCEEEEECC--CCSCEEEEEE--
T ss_pred EcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-EEEEECCCCCEEEEEcC--CcccEEEEEE--
Confidence 3489999999998854 4567789999999999 8899999999999 99999999999998885 6678888887
Q ss_pred CCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEE---eCCCceEEEecc
Q 015650 314 NAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRL---VEGSPYIVAFGH 390 (403)
Q Consensus 314 d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~fs~ 390 (403)
++++|++++.||.|++||+++++. +..+.. +...+.+++|
T Consensus 328 ~~~~l~~~~~dg~i~vwd~~~~~~-----------------------------------~~~~~~~~~~~~~v~~~~~-- 370 (445)
T 2ovr_B 328 KDNILVSGNADSTVKIWDIKTGQC-----------------------------------LQTLQGPNKHQSAVTCLQF-- 370 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCE-----------------------------------EEEECSTTSCSSCEEEEEE--
T ss_pred eCCEEEEEeCCCeEEEEECCCCcE-----------------------------------EEEEccCCCCCCCEEEEEE--
Confidence 567999999999999999988763 222332 4567888888
Q ss_pred CCCEEEEEccCCC
Q 015650 391 QKNTVVILGMDGR 403 (403)
Q Consensus 391 d~~~l~~~~~dG~ 403 (403)
++++|++|+.||+
T Consensus 371 ~~~~l~s~~~dg~ 383 (445)
T 2ovr_B 371 NKNFVITSSDDGT 383 (445)
T ss_dssp CSSEEEEEETTSE
T ss_pred CCCEEEEEeCCCe
Confidence 4789999999984
No 87
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.7e-31 Score=261.42 Aligned_cols=243 Identities=15% Similarity=0.232 Sum_probs=201.0
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCce
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (403)
..+.+|...|.+++|+|++++|++|+ |+.|+|||+.++... ..+. +|...|.+++|++++..+++++.| ++
T Consensus 424 ~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~--~~~~-~h~~~v~~~~~s~~~~~l~s~s~D-----~~ 495 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST--RRFV-GHTKDVLSVAFSLDNRQIVSASRD-----RT 495 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEECTTSSCEEEEETT-----SC
T ss_pred ceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce--eEEe-CCCCCEEEEEEeCCCCEEEEEeCC-----CE
Confidence 45788999999999999999999998 555999999887655 5565 799999999999999999999999 99
Q ss_pred EEEEECCCCceeEEEe----cCCceeEEEEecCc--eEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCe
Q 015650 158 VMIWDDHQSRCIGELS----FRSEVRSVKLRRDR--IIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~----~~~~i~~~~~~~~~--~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (403)
|++||+.......... |...|.+++|+|++ ..++ .|++|++||+++++....+..|...+..++++|+++.
T Consensus 496 i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 496 IKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp EEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred EEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCE
Confidence 9999976554333321 67789999999986 3444 4999999999999999999999999999999999873
Q ss_pred EEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCC-------
Q 015650 229 LVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA------- 301 (403)
Q Consensus 229 ~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~------- 301 (403)
+++ |+.|+.|++||+++++......+...|.+++|+|++.+|++++ ++. |+|||+++++.+..+..+.
T Consensus 576 --l~s-g~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~-i~iwd~~~~~~~~~~~~~~~~~~~~~ 650 (694)
T 3dm0_A 576 --CAS-GGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHG-IKIWDLESKSIVEDLKVDLKAEAEKA 650 (694)
T ss_dssp --EEE-EETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTE-EEEEETTTTEEEEEECCCCC------
T ss_pred --EEE-EeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCC-EEEEECCCCCChhhhccccccccccc
Confidence 444 4589999999999876655455677899999999999887765 566 9999999999888775321
Q ss_pred ----------CcccEEEEEeCCCCCEEEEEeCCCcEEEEEeec
Q 015650 302 ----------DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 302 ----------~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~ 334 (403)
+...+++++|+|||++|++|+.||.|+||++..
T Consensus 651 ~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 651 DNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp ----------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 112378999999999999999999999999863
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-30 Score=243.75 Aligned_cols=240 Identities=16% Similarity=0.217 Sum_probs=200.1
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeee--CCeEEEeeCCCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQY 153 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~~~d~~~ 153 (403)
....+.+|.+.|.+++|++++ +|++|+ |+.|++||+++++.. ..+. +|...|.++.+. +++..+++++.|
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d--- 226 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCT--HVFE-GHNSTVRCLDIVEYKNIKYIVTGSRD--- 226 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEEEESSSCEEEEEEETT---
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEE--EEEC-CCCCccEEEEEecCCCCCEEEEEcCC---
Confidence 335577899999999999988 777777 555999999988755 5565 788899999887 578899999998
Q ss_pred CCceEEEEECCCCcee-----------------------EEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCcee
Q 015650 154 PLNKVMIWDDHQSRCI-----------------------GELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKL 206 (403)
Q Consensus 154 ~~~~i~iwd~~~~~~~-----------------------~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~ 206 (403)
+.|++||+.+++.. ..+. |...+.++ ++++.+++ .|+.|++||+++++.
T Consensus 227 --~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~ 302 (464)
T 3v7d_B 227 --NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC 302 (464)
T ss_dssp --SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE
T ss_pred --CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 99999999877532 3333 66777776 45555555 499999999999999
Q ss_pred eeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEE
Q 015650 207 LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRI 285 (403)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~i 285 (403)
+..+..|...+..++++++++.+ ++ |+.|+.|++||++++. ...+.+|...|.+++|+ +++|++++.||. |++
T Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l--~s-g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~-v~v 376 (464)
T 3v7d_B 303 LYILSGHTDRIYSTIYDHERKRC--IS-ASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGS-IRG 376 (464)
T ss_dssp EEEECCCSSCEEEEEEETTTTEE--EE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSE-EEE
T ss_pred EEEecCCCCCEEEEEEcCCCCEE--EE-EeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCc-EEE
Confidence 99999999999999999988743 33 4589999999998754 56678899999999996 589999999999 999
Q ss_pred EEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 286 FNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 286 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
||+.+++....+. +...+..++|++++++|++++ ||.|++||+++++.
T Consensus 377 wd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~ 424 (464)
T 3v7d_B 377 WDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKL 424 (464)
T ss_dssp EETTTCCEEEEEE---CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCE
T ss_pred EECCCCceeeeec---CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcE
Confidence 9999988777665 556788899999999999998 89999999999884
No 89
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-30 Score=233.11 Aligned_cols=246 Identities=17% Similarity=0.243 Sum_probs=202.0
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
...+.+|...|.+++|+|+|++|++++.++ |++|+......... .. .+...+....+.+++..+++++.| +
T Consensus 79 ~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~s~s~d-----~ 150 (340)
T 4aow_A 79 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR--FV-GHTKDVLSVAFSSDNRQIVSGSRD-----K 150 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EE-CCSSCEEEEEECTTSSCEEEEETT-----S
T ss_pred eEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeee--ec-CCCCceeEEEEeecCccceeecCC-----C
Confidence 356788999999999999999999998554 99999987766533 32 466677788888888889999988 9
Q ss_pred eEEEEECCCCceeEEE-e-cCCceeEEEEecCc--eEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeE
Q 015650 157 KVMIWDDHQSRCIGEL-S-FRSEVRSVKLRRDR--IIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~-~-~~~~i~~~~~~~~~--~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (403)
.+++||+......... . |...+..++|++++ .+++ .|+.|++||+++++.+..+..|...+..++|+|+++.
T Consensus 151 ~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~- 229 (340)
T 4aow_A 151 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL- 229 (340)
T ss_dssp CEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE-
T ss_pred eEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCE-
Confidence 9999998776544333 2 78899999998864 3444 4899999999999999999999999999999998873
Q ss_pred EEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEec-------CCC
Q 015650 230 VLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR-------GAD 302 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~-------~~~ 302 (403)
+++ |+.|+.|++||++.........+...+.++.|+|++.++ +++.|+. |+|||++++..+..+.. ..|
T Consensus 230 -l~s-~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~h 305 (340)
T 4aow_A 230 -CAS-GGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAE 305 (340)
T ss_dssp -EEE-EETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTE-EEEEETTTTEEEEEECCC-------CC
T ss_pred -EEE-EeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCE-EEEEECCCCeEEEeccccceeeeccCC
Confidence 444 348999999999997766666677889999999998755 5667898 99999998887776653 236
Q ss_pred cccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 303 RAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 303 ~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
...|++++|+|||++|++|+.||.|+|||+++|+
T Consensus 306 ~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 306 PPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 7889999999999999999999999999999986
No 90
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.8e-31 Score=262.44 Aligned_cols=249 Identities=12% Similarity=0.159 Sum_probs=208.5
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
....+.+|...|.+++|+|++++|++|++++ |+||++.+++.. ..+. +|...+.++.|++++..+++++.|
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~--~~~~-~~~~~v~~~~~s~~~~~l~~~~~d----- 118 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV--VDFE-AHPDYIRSIAVHPTKPYVLSGSDD----- 118 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE--EEEE-CCSSCEEEEEECSSSSEEEEEETT-----
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE--EEEe-cCCCCEEEEEEeCCCCEEEEEcCC-----
Confidence 3455678999999999999999999998555 999999888765 4554 688999999999999999999988
Q ss_pred ceEEEEECCCC-ceeEEEe-cCCceeEEEEec-CceEEE---ecCeEEEEEcCCceeeeEeeccC-CCceeEEEeeCCCe
Q 015650 156 NKVMIWDDHQS-RCIGELS-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIETIA-NPKGLCAVSQGVGS 228 (403)
Q Consensus 156 ~~i~iwd~~~~-~~~~~~~-~~~~i~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 228 (403)
|.|++||+.++ .....+. |...|.+++|+| ++..++ .|+.|++||+.+++....+..+. ..+..++++|.++.
T Consensus 119 g~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 198 (814)
T 3mkq_A 119 LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK 198 (814)
T ss_dssp SEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTC
T ss_pred CEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCC
Confidence 99999999987 5666666 899999999999 777776 48999999999888777776554 78899999994333
Q ss_pred EEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEE
Q 015650 229 LVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIY 307 (403)
Q Consensus 229 ~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~ 307 (403)
.++++ ++.|+.|++||++++. ...+..|...|.+++|+|++++|++++.||. |++||+.+++.+..+.. +...+.
T Consensus 199 ~~l~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~--~~~~v~ 274 (814)
T 3mkq_A 199 PYMIT-ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNV--GLERSW 274 (814)
T ss_dssp CEEEE-ECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCSEEEEECC--SSSSEE
T ss_pred CEEEE-EeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEeec--CCCcEE
Confidence 34554 3489999999998855 5567789999999999999999999999999 99999999999988886 567999
Q ss_pred EEEeCCCCC--EEEEEeCCCcEEEEEeecCCCC
Q 015650 308 SLAFSSNAQ--WLAVSSDKGTVHVFNLKVNSGS 338 (403)
Q Consensus 308 ~l~~s~d~~--~l~s~~~dg~v~iwd~~~~~~~ 338 (403)
+++|+|++. +++++ .++.+.+|++......
T Consensus 275 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 306 (814)
T 3mkq_A 275 CIATHPTGRKNYIASG-FDNGFTVLSLGNDEPT 306 (814)
T ss_dssp EEEECTTCGGGEEEEE-ETTEEEEEECSCCSCC
T ss_pred EEEEccCCCceEEEEE-eCCCEEEEEcCCCCce
Confidence 999999997 45554 5677999998766543
No 91
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4e-31 Score=240.49 Aligned_cols=238 Identities=13% Similarity=0.127 Sum_probs=191.5
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 82 SSPPPTLLHISFNQ-DHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 82 ~~~~~~i~~i~~s~-d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
.+|...|.+++|+| ++.+|++++. +.|++||+........... ..+...+.++.|++++..+++++.| +.|+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~ 188 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKT-DSWDYWYCCVDVSVSRQMLATGDST-----GRLL 188 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECC-CCSSCCEEEEEEETTTTEEEEEETT-----SEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEecc-CCCCCCeEEEEECCCCCEEEEECCC-----CCEE
Confidence 47999999999999 7789998884 5599999986433222222 2455789999999999999999999 9999
Q ss_pred EEECCCCceeEEEe-cCCceeEEEEecCce-EEE---ecCeEEEEEcCC----ceeeeEeeccCCCceeEEEee-CCCeE
Q 015650 160 IWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFAD----LKLLHQIETIANPKGLCAVSQ-GVGSL 229 (403)
Q Consensus 160 iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~d~~i~i~d~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~ 229 (403)
+||+ +++.+..+. |...|.+++|+|++. +++ .|+.|++||+++ ++.+..+ .|...+..++|+| +++.
T Consensus 189 i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~- 265 (383)
T 3ei3_B 189 LLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTK- 265 (383)
T ss_dssp EEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCE-
T ss_pred EEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCE-
Confidence 9998 577788887 999999999999987 565 489999999998 5566666 6888999999999 7764
Q ss_pred EEEeeCCccCeEEEEEccCCc-eeEEeecC-----------------CceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCC
Q 015650 230 VLVCPGLQKGQVRVEHYASKR-TKFIMAHD-----------------SRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~-----------------~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~ 291 (403)
+++ ++.|+.|++||+++.. ...+..|. ..+..++|+|++++ +++.|+. |+|||+.++
T Consensus 266 -l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~-i~iwd~~~~ 340 (383)
T 3ei3_B 266 -LLT-TDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRT-IDIYDANSG 340 (383)
T ss_dssp -EEE-EESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCC-EEEEETTTC
T ss_pred -EEE-EcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCe-EEEEecCCC
Confidence 333 3479999999998743 34444332 33445667777766 7788999 999999999
Q ss_pred cEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeec
Q 015650 292 TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 292 ~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~ 334 (403)
+++..+..+.+...+..++|+|++++|++++ ||.|+|||+++
T Consensus 341 ~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 341 GLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred ceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 9999998765667788889999999999997 99999999975
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-30 Score=233.94 Aligned_cols=252 Identities=8% Similarity=0.092 Sum_probs=210.6
Q ss_pred CCccccCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCC
Q 015650 76 PAESTSSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (403)
Q Consensus 76 ~~~~~~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~ 154 (403)
.....+.+|...|.+++|+|++++|++++.+ .|++|++.+++.. ..+. +...+.++.|++++..++++..+....
T Consensus 65 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~ 140 (369)
T 3zwl_B 65 ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV--ATWK--SPVPVKRVEFSPCGNYFLAILDNVMKN 140 (369)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE--EEEE--CSSCEEEEEECTTSSEEEEEECCBTTB
T ss_pred hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE--EEee--cCCCeEEEEEccCCCEEEEecCCccCC
Confidence 3446677899999999999999999999855 4999999888766 4454 667899999999988887765432222
Q ss_pred CceEEEEECCCCce-----------eEEEe-cCC--ceeEEEEecCceEEE---ecCeEEEEEcCC-ceeeeEeeccCCC
Q 015650 155 LNKVMIWDDHQSRC-----------IGELS-FRS--EVRSVKLRRDRIIVV---LEQKIFVYNFAD-LKLLHQIETIANP 216 (403)
Q Consensus 155 ~~~i~iwd~~~~~~-----------~~~~~-~~~--~i~~~~~~~~~~~~~---~d~~i~i~d~~~-~~~~~~~~~~~~~ 216 (403)
++.|++||+..+.. +..+. +.. .+.+++|+|++.+++ .|+.|++||+++ ++.+..+..+...
T Consensus 141 ~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 220 (369)
T 3zwl_B 141 PGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS 220 (369)
T ss_dssp CCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC
T ss_pred CCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc
Confidence 27999999877642 22333 444 899999999998887 489999999998 7888889889999
Q ss_pred ceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCC--------------cE
Q 015650 217 KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG--------------TL 282 (403)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg--------------~~ 282 (403)
+..++|+++++.++ + ++.|+.|++||+++........+...+.+++|+|+++++++++.++ .
T Consensus 221 v~~~~~~~~~~~l~--~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~- 296 (369)
T 3zwl_B 221 ISDMQFSPDLTYFI--T-SSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFE- 296 (369)
T ss_dssp EEEEEECTTSSEEE--E-EETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CE-
T ss_pred eeEEEECCCCCEEE--E-ecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcce-
Confidence 99999999887543 3 3479999999999977766666889999999999999999999888 7
Q ss_pred EEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 283 VRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 283 i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
+++||+.+++.+..+.. |...|++++|+|++++|++++.||.|++|+++++..
T Consensus 297 i~~~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 297 ARFYHKIFEEEIGRVQG--HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EEEEETTTCCEEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred eEEEecCCCcchhheec--ccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 99999999999999986 678999999999999999999999999999998764
No 93
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.7e-31 Score=239.43 Aligned_cols=248 Identities=8% Similarity=0.036 Sum_probs=204.1
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
...+.+|...|.+++|+|++++|++++.+ .|++|++.+.+......+. .|...+.++.|++++..+++++.+ +
T Consensus 45 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-----~ 118 (372)
T 1k8k_C 45 VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL-RINRAARCVRWAPNEKKFAVGSGS-----R 118 (372)
T ss_dssp EEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECC-CCSSCEEEEEECTTSSEEEEEETT-----S
T ss_pred eeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEee-cCCCceeEEEECCCCCEEEEEeCC-----C
Confidence 35567899999999999999999999854 5999999887755444444 688899999999999999999988 9
Q ss_pred eEEEEECCCCce---eEEEe--cCCceeEEEEecCceEEE---ecCeEEEEEc------------------CCceeeeEe
Q 015650 157 KVMIWDDHQSRC---IGELS--FRSEVRSVKLRRDRIIVV---LEQKIFVYNF------------------ADLKLLHQI 210 (403)
Q Consensus 157 ~i~iwd~~~~~~---~~~~~--~~~~i~~~~~~~~~~~~~---~d~~i~i~d~------------------~~~~~~~~~ 210 (403)
.|++||+..++. ...+. |...|.+++|+|++.+++ .|+.|++||+ ..++.+..+
T Consensus 119 ~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (372)
T 1k8k_C 119 VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 198 (372)
T ss_dssp SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC
T ss_pred EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec
Confidence 999999988763 33343 788999999999998877 3899999995 367788888
Q ss_pred eccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCC-ceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcC
Q 015650 211 ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK-RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (403)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~-~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~ 289 (403)
..|...+..++|+++++. +++ ++.|+.|++||++++ .+..+..|...|.+++|+|++++|+++ .|+. |++||+.
T Consensus 199 ~~~~~~v~~~~~~~~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~-i~i~~~~ 273 (372)
T 1k8k_C 199 SSSCGWVHGVCFSANGSR--VAW-VSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCF-PVLFTYD 273 (372)
T ss_dssp CCCSSCEEEEEECSSSSE--EEE-EETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSS-CEEEEEE
T ss_pred CCCCCeEEEEEECCCCCE--EEE-EeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCe-EEEEEcc
Confidence 888899999999998874 333 348999999999874 456678899999999999999988877 8999 9999998
Q ss_pred C--CcE--E------------------------------------EEEecCCCcccEEEEEeC-CCC---CEEEEEeCCC
Q 015650 290 D--GTL--L------------------------------------QEVRRGADRAEIYSLAFS-SNA---QWLAVSSDKG 325 (403)
Q Consensus 290 ~--~~~--~------------------------------------~~~~~~~~~~~v~~l~~s-~d~---~~l~s~~~dg 325 (403)
+ ++. + ..+. ..|...|++++|. ++| .+|++++.||
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg 352 (372)
T 1k8k_C 274 SAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD-SLHKNSVSQISVLSGGKAKCSQFCTTGMDG 352 (372)
T ss_dssp TTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCS-SSSSSCEEEEEEEESTTTSCSEEEEEETTS
T ss_pred CcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccc-ccccCCcceeEEecCCCcceeeEEEecCCC
Confidence 7 421 0 1122 1378899999966 676 9999999999
Q ss_pred cEEEEEeecCCC
Q 015650 326 TVHVFNLKVNSG 337 (403)
Q Consensus 326 ~v~iwd~~~~~~ 337 (403)
.|++||+++++.
T Consensus 353 ~i~~W~~~~~~~ 364 (372)
T 1k8k_C 353 GMSIWDVRSLES 364 (372)
T ss_dssp EEEEEEHHHHHH
T ss_pred ceEEEEecChhH
Confidence 999999998763
No 94
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-32 Score=249.96 Aligned_cols=232 Identities=13% Similarity=0.108 Sum_probs=188.1
Q ss_pred cceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCC--ceeEEEe-cCCceeEEEEecCceEEE---ecCeEEEEEc
Q 015650 128 GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS--RCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNF 201 (403)
Q Consensus 128 ~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~--~~~~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~ 201 (403)
+...|.+++|++++.++++++.| +.|++||+.++ +.+..+. |...|.+++|+|++.+++ .|++|++||+
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred CCCcEEEEEECCCCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 45678999999999999999988 99999999988 6777777 899999999999998877 3899999999
Q ss_pred CCce---eeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc----eeEEee-cCCceEEEEEcCCCCEE
Q 015650 202 ADLK---LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR----TKFIMA-HDSRIACFALTQDGQLL 273 (403)
Q Consensus 202 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~----~~~~~~-~~~~i~~~~~sp~g~~l 273 (403)
.+++ ....+..|...+..++|+++++.++.+ +.|+.|++||++.+. ...+.. |...|.+++|+|++++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVG---SGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEE---ESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEE---ecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEE
Confidence 9876 566677889999999999988754433 479999999999865 566776 99999999999999999
Q ss_pred EEEeCCCcEEEEEEcC------------------CCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecC
Q 015650 274 ATSSTKGTLVRIFNTL------------------DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (403)
Q Consensus 274 ~s~~~dg~~i~iwd~~------------------~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~ 335 (403)
++++.|+. |++||+. .++++..+ .|...|.+++|+|++++|++++.||.|++||+.++
T Consensus 162 ~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 162 AAGCADRK-AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEESSSC-EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEeCCCE-EEEEEEEecccCCCccccccccccchhhhhhcc---cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 99999999 9999985 34455555 37889999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 336 SGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
+.... .+..+..|...+..++|+|++++|++|+.|+
T Consensus 238 ~~~~~-------------------------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~ 273 (377)
T 3dwl_C 238 EQPPR-------------------------------ALITVKLSQLPLRSLLWANESAIVAAGYNYS 273 (377)
T ss_dssp TSCEE-------------------------------ECCCEECSSSCEEEEEEEETTEEEEEESSSS
T ss_pred CCcce-------------------------------eeEeecCCCCceEEEEEcCCCCEEEEEcCCc
Confidence 74110 0223566778899999999999999998775
No 95
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-31 Score=239.32 Aligned_cols=240 Identities=13% Similarity=0.159 Sum_probs=197.0
Q ss_pred EecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC--CCceeEEEe-cCCceeEEEEecC--ceEEE---ec
Q 015650 122 RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH--QSRCIGELS-FRSEVRSVKLRRD--RIIVV---LE 193 (403)
Q Consensus 122 ~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~--~~~~~~~~~-~~~~i~~~~~~~~--~~~~~---~d 193 (403)
..+. +|...|.+++|++++..+++++.| |.|++||+. +++.+..+. |...|.+++|+++ +.+++ .|
T Consensus 5 ~~~~-~h~~~v~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 5 VIAN-AHNELIHDAVLDYYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp CCEE-ECCCCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred EEec-CCcccEEEEEEcCCCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC
Confidence 3444 799999999999999999999988 999999998 556777777 8999999999876 77777 48
Q ss_pred CeEEEEEcCCce--eeeEeeccCCCceeEEEeeC--CCeEEEEeeCCccCeEEEEEccCC---ceeEEeecCCceEEEEE
Q 015650 194 QKIFVYNFADLK--LLHQIETIANPKGLCAVSQG--VGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFAL 266 (403)
Q Consensus 194 ~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~d~~i~v~d~~~~---~~~~~~~~~~~i~~~~~ 266 (403)
+.|++||+++++ .+..+..|...+..++|+++ ++. +++ ++.|+.|++||++.. ....+..|...|.+++|
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL--LLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE--EEE-EETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCE--EEE-ecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 999999999886 67777788899999999998 553 333 348999999999885 34566789999999999
Q ss_pred cC-------------CCCEEEEEeCCCcEEEEEEcCCCc----EEEEEecCCCcccEEEEEeCCC---CCEEEEEeCCCc
Q 015650 267 TQ-------------DGQLLATSSTKGTLVRIFNTLDGT----LLQEVRRGADRAEIYSLAFSSN---AQWLAVSSDKGT 326 (403)
Q Consensus 267 sp-------------~g~~l~s~~~dg~~i~iwd~~~~~----~~~~~~~~~~~~~v~~l~~s~d---~~~l~s~~~dg~ 326 (403)
+| ++.+|++++.|+. |++||+++++ .+..+.. |...|.+++|+|+ +++|++++.||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred cCccccccccccCCCCCCEEEEEeCCCe-EEEEEecCCCcceeeEEEEec--ccCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 99 6999999999999 9999998764 3344543 7789999999999 899999999999
Q ss_pred EEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 327 VHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 327 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
|++||+++++..... .......+...+..++|+|++++|++++.||+
T Consensus 233 i~iwd~~~~~~~~~~------------------------------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 279 (379)
T 3jrp_A 233 CIIWTQDNEQGPWKK------------------------------TLLKEEKFPDVLWRASWSLSGNVLALSGGDNK 279 (379)
T ss_dssp EEEEEESSTTSCCEE------------------------------EESSSSCCSSCEEEEEECSSSCCEEEEESSSS
T ss_pred EEEEeCCCCCcccee------------------------------eeeccccCCCcEEEEEEcCCCCEEEEecCCCc
Confidence 999999987631100 00001224568899999999999999999984
No 96
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.8e-31 Score=244.36 Aligned_cols=267 Identities=11% Similarity=0.119 Sum_probs=209.6
Q ss_pred CeEEEEEcCCCCEEEE-Ec-CCcEEEEEcCCCeeE--EEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEEE
Q 015650 87 TLLHISFNQDHGCFAA-GT-DHGFRIYNCDPFREI--FRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIW 161 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~-~~-~~~i~iw~~~~~~~~--~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iw 161 (403)
....++++|+...+++ ++ ++.|+||++...... ....+. +|...|.++.|++ ++..+++++.| |.|++|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d-----g~v~vw 109 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVC-GHTAPVLDIAWCPHNDNVIASGSED-----CTVMVW 109 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBC-CCSSCEEEEEECTTCTTEEEEEETT-----SEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEe-cCCCCEEEEEeCCCCCCEEEEEeCC-----CeEEEE
Confidence 3446889988765553 44 555999998654332 112344 7899999999999 88899999998 999999
Q ss_pred ECCCC-------ceeEEEe-cCCceeEEEEecCc-eEEE---ecCeEEEEEcCCceeeeEe--eccCCCceeEEEeeCCC
Q 015650 162 DDHQS-------RCIGELS-FRSEVRSVKLRRDR-IIVV---LEQKIFVYNFADLKLLHQI--ETIANPKGLCAVSQGVG 227 (403)
Q Consensus 162 d~~~~-------~~~~~~~-~~~~i~~~~~~~~~-~~~~---~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 227 (403)
|+.++ +.+..+. |...|.+++|+|++ .+++ .|+.|++||+++++.+..+ ..|...+..++|+++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 189 (402)
T 2aq5_A 110 EIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGA 189 (402)
T ss_dssp ECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSS
T ss_pred EccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCC
Confidence 99988 5677777 99999999999997 4665 4899999999999999998 78899999999999887
Q ss_pred eEEEEeeCCccCeEEEEEccCCce-eEE-eecCCc-eEEEEEcCCCCEEEEE---eCCCcEEEEEEcCCCcE-EEEEecC
Q 015650 228 SLVLVCPGLQKGQVRVEHYASKRT-KFI-MAHDSR-IACFALTQDGQLLATS---STKGTLVRIFNTLDGTL-LQEVRRG 300 (403)
Q Consensus 228 ~~~~~~~g~~d~~i~v~d~~~~~~-~~~-~~~~~~-i~~~~~sp~g~~l~s~---~~dg~~i~iwd~~~~~~-~~~~~~~ 300 (403)
.++. ++.|+.|++||++.+.. ..+ ..|.+. +.++.|+|++++|++| +.|+. |++||+++++. +.....
T Consensus 190 ~l~~---~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~-i~iwd~~~~~~~~~~~~~- 264 (402)
T 2aq5_A 190 LICT---SCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ-VALWDTKHLEEPLSLQEL- 264 (402)
T ss_dssp CEEE---EETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE-EEEEETTBCSSCSEEEEC-
T ss_pred EEEE---EecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce-EEEEcCccccCCceEEec-
Confidence 5433 34899999999998654 444 577765 8999999999999999 78999 99999988764 333332
Q ss_pred CCcccEEEEEeCCCCCEEEE-EeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEE-
Q 015650 301 ADRAEIYSLAFSSNAQWLAV-SSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRL- 378 (403)
Q Consensus 301 ~~~~~v~~l~~s~d~~~l~s-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 378 (403)
.+...+.+++|+|++++|++ ++.||.|++||+.+++.. +..+..
T Consensus 265 ~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~----------------------------------~~~l~~~ 310 (402)
T 2aq5_A 265 DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF----------------------------------LHYLSMF 310 (402)
T ss_dssp CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC----------------------------------EEEEEEE
T ss_pred cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc----------------------------------eEeeccc
Confidence 25678999999999999975 557999999999987730 111222
Q ss_pred -eCCCceEEEeccCCCEEEEE
Q 015650 379 -VEGSPYIVAFGHQKNTVVIL 398 (403)
Q Consensus 379 -~~~~~~~~~fs~d~~~l~~~ 398 (403)
+.+.+..++|+|++.+++++
T Consensus 311 ~~~~~v~~~~~sp~~~~~~s~ 331 (402)
T 2aq5_A 311 SSKESQRGMGYMPKRGLEVNK 331 (402)
T ss_dssp CCSSCCSEEEECCGGGSCGGG
T ss_pred ccCCcccceEEecccccceec
Confidence 34788889999998877654
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.3e-31 Score=237.55 Aligned_cols=240 Identities=19% Similarity=0.240 Sum_probs=193.7
Q ss_pred CCCCCCeEEEEEcCC---CCEEEEEc-CCcEEEEEcCCCe-eEEEEecccCcceeEEEE------eeeCCeEEEeeCCCC
Q 015650 82 SSPPPTLLHISFNQD---HGCFAAGT-DHGFRIYNCDPFR-EIFRRDFERGGGIGVVEM------LFRCNILALVGGGPD 150 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d---~~~l~~~~-~~~i~iw~~~~~~-~~~~~~~~~~~~~~v~~~------~~~~~~~~~~s~~~d 150 (403)
.+|...|.+++|+|+ +.+|++|+ ++.|++|++.+.+ .. ..+. +|...+.++ +|++++..+++++.|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d 138 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPV--YSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRD 138 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCS--EEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETT
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccE--EEEE-ecccceEEEeeccccccCCCccEEEEEeCC
Confidence 478999999999999 69999988 4559999998776 33 4454 688889988 456788899999998
Q ss_pred CCCCCceEEEEECCCCc-eeEEEe-cC----CceeEEE----EecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCc
Q 015650 151 PQYPLNKVMIWDDHQSR-CIGELS-FR----SEVRSVK----LRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPK 217 (403)
Q Consensus 151 ~~~~~~~i~iwd~~~~~-~~~~~~-~~----~~i~~~~----~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~ 217 (403)
+.|++||+.+++ .+..+. +. ..+.+++ |++++.+++ .|+.|++||+++++.... ..+...+
T Consensus 139 -----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v 212 (357)
T 3i2n_A 139 -----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGV 212 (357)
T ss_dssp -----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCE
T ss_pred -----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCce
Confidence 999999999987 677775 33 3788888 678888887 379999999999887544 4677889
Q ss_pred eeEEEee---CCCeEEEEeeCCccCeEEEEEccCCc-ee-----EEeecCCceEEEEEcCCCC-EEEEEeCCCcEEEEEE
Q 015650 218 GLCAVSQ---GVGSLVLVCPGLQKGQVRVEHYASKR-TK-----FIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFN 287 (403)
Q Consensus 218 ~~~~~~~---~~~~~~~~~~g~~d~~i~v~d~~~~~-~~-----~~~~~~~~i~~~~~sp~g~-~l~s~~~dg~~i~iwd 287 (403)
..++|+| +++.+ ++ ++.|+.|++||++.+. .. .+..|...|.+++|+|+++ +|++++.||. |++||
T Consensus 213 ~~~~~~~~~~~~~~l--~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~iwd 288 (357)
T 3i2n_A 213 CSLEFDRKDISMNKL--VA-TSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG-LHLWK 288 (357)
T ss_dssp EEEEESCSSSSCCEE--EE-EESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE-EEEEE
T ss_pred EEEEcCCCCCCCCEE--EE-ECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc-EEEee
Confidence 9999999 66643 33 3489999999998743 22 2348999999999999998 8999999999 99999
Q ss_pred cCCC-------------------cEEEEEecCCCcccEEEEEeCCCCCEEE-EEeCCCcEEEEEeecCC
Q 015650 288 TLDG-------------------TLLQEVRRGADRAEIYSLAFSSNAQWLA-VSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 288 ~~~~-------------------~~~~~~~~~~~~~~v~~l~~s~d~~~l~-s~~~dg~v~iwd~~~~~ 336 (403)
++++ +.+..+.. |...|++++|+|++++|+ +++.||.|++||+.+.+
T Consensus 289 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 289 YEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL--STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EECCSCC--CCTTSCCCCCCCEEEEEEEEEC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred cCCCcccccccCCCCccccccccceeecccc--CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 9754 35556664 678999999999999998 89999999999998865
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-31 Score=262.27 Aligned_cols=249 Identities=15% Similarity=0.150 Sum_probs=202.7
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCC--eEEEeeCCCCCCCCC
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN--ILALVGGGPDPQYPL 155 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~s~~~d~~~~~ 155 (403)
.++.+|.+.|++++|+|++++|++|+.++ |+||++..........+. +|...|.++.|+++ +..+++++.|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~~~l~s~s~D----- 76 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYD----- 76 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCTTSCSEEEEEETT-----
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc-CCcCceEEEEecCCCCCCEEEEEeCC-----
Confidence 45789999999999999999999998554 999999866655556776 78999999999887 8899999998
Q ss_pred ceEEEEECCCCc--eeEEEe-cCCceeEEEEecC--ceEEE---ecCeEEEEEcCCce--eeeEeeccCCCceeEEEeeC
Q 015650 156 NKVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLK--LLHQIETIANPKGLCAVSQG 225 (403)
Q Consensus 156 ~~i~iwd~~~~~--~~~~~~-~~~~i~~~~~~~~--~~~~~---~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~ 225 (403)
|.|++||+.+++ .+..+. |...|.+++|+|+ +.+++ .||.|++||++++. ....+..|...+..++++|.
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 999999999986 555565 8999999999998 77777 48999999998863 34556778889999999984
Q ss_pred -------------CCeEEEEeeCCccCeEEEEEccCCc-----eeEEeecCCceEEEEEcCC---CCEEEEEeCCCcEEE
Q 015650 226 -------------VGSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAHDSRIACFALTQD---GQLLATSSTKGTLVR 284 (403)
Q Consensus 226 -------------~~~~~~~~~g~~d~~i~v~d~~~~~-----~~~~~~~~~~i~~~~~sp~---g~~l~s~~~dg~~i~ 284 (403)
+. ++++ |+.||.|++||++... ...+.+|...|.+++|+|+ +++|++++.||. |+
T Consensus 157 ~~~~~~~~~~~~d~~--~l~s-gs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~-I~ 232 (753)
T 3jro_A 157 TIEEDGEHNGTKESR--KFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CI 232 (753)
T ss_dssp C---------CGGGC--CEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC-EE
T ss_pred ccccccccccCCCCC--EEEE-EECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE-EE
Confidence 44 3343 3479999999998742 3456789999999999999 999999999999 99
Q ss_pred EEEcCCCcEE---EEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 285 IFNTLDGTLL---QEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 285 iwd~~~~~~~---~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
+||+.+++.. .......|...|++++|+|+|++|++++.||.|++|+++++..
T Consensus 233 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp EEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSC
T ss_pred EecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCC
Confidence 9999886421 1122223678899999999999999999999999999997553
No 99
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1e-31 Score=246.49 Aligned_cols=252 Identities=10% Similarity=0.026 Sum_probs=198.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEE
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~i 160 (403)
+.-...|.+++|+|||+++|++++++ |+ +.... ..+. +|...+..++|+|++ .+ +.+.+
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~-----~~l~-gh~~~v~~V~FsPdg-------~~-----~~~~~ 71 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA-----KDIN-CNSKNLFHVKEFPLE-------FE-----NKLDF 71 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC-----SCCS-SBGGGTEEEEEECCC-------CC-----CTTTT
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--ccccc-----ceec-CCCccEEEEEECCCC-------Cc-----ceEEE
Confidence 44567899999999999999999555 88 64433 3344 799999999999998 33 66666
Q ss_pred EECCCCceeEEEecCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCC-----CceeEEEeeCCCeEEEE
Q 015650 161 WDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIAN-----PKGLCAVSQGVGSLVLV 232 (403)
Q Consensus 161 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 232 (403)
|+.+ +..+..+.+...|.+++|+|+|..++ .||.|++||... ++..+. |.. .+..++|+|+++.++.+
T Consensus 72 ~~~~-~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsg 147 (588)
T 2j04_A 72 ELAQ-QNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVG 147 (588)
T ss_dssp SCCC-SSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEE
T ss_pred EeCC-CceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEE
Confidence 6643 22333445688899999999999888 499999999543 566666 554 48899999999854433
Q ss_pred eeCCccCeEEEEEccCCc--------eeEE----eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcE---EEEE
Q 015650 233 CPGLQKGQVRVEHYASKR--------TKFI----MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL---LQEV 297 (403)
Q Consensus 233 ~~g~~d~~i~v~d~~~~~--------~~~~----~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~---~~~~ 297 (403)
+.||+|++||+..+. +..+ .+|...|.+++|+||| |++++.|+. |++||+.+++. .+++
T Consensus 148 ---s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~t-VrlWd~~~~~~~~~~~tL 221 (588)
T 2j04_A 148 ---NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNS-VFSMTVSASSHQPVSRMI 221 (588)
T ss_dssp ---ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCC-EEEECCCSSSSCCCEEEE
T ss_pred ---cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCe-EEEEECCCCccccceeee
Confidence 489999999999874 3555 5677899999999999 788899999 99999988773 3556
Q ss_pred ecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEE
Q 015650 298 RRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFR 377 (403)
Q Consensus 298 ~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (403)
..+ |...|.+++|+ |++||+++ +++|++||+.+++. ..+.
T Consensus 222 ~~~-h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~------------------------------------~~~~ 261 (588)
T 2j04_A 222 QNA-SRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSI------------------------------------SSLK 261 (588)
T ss_dssp ECC-CSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEE------------------------------------EEEE
T ss_pred ccc-ccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeE------------------------------------EEEE
Confidence 432 66899999999 68999987 69999999998762 1122
Q ss_pred -EeCCCceEEEe--ccCCCEEEEEccCCC
Q 015650 378 -LVEGSPYIVAF--GHQKNTVVILGMDGR 403 (403)
Q Consensus 378 -~~~~~~~~~~f--s~d~~~l~~~~~dG~ 403 (403)
+|.+.++.++| +||+..|+++++||+
T Consensus 262 ~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 262 TGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp CSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred cCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 67789999999 999999999999984
No 100
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=6.2e-31 Score=240.82 Aligned_cols=249 Identities=11% Similarity=0.128 Sum_probs=203.3
Q ss_pred ccccCCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEEcCCCee-----EEEEecccCcceeEEEEeeeCCe-EEEeeCCC
Q 015650 78 ESTSSSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFRE-----IFRRDFERGGGIGVVEMLFRCNI-LALVGGGP 149 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~-d~~~l~~~~~~~-i~iw~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~ 149 (403)
...+.+|.+.|++++|+| ++.+|++|+.++ |+||++.+... .....+. +|...|.++.|++++ ..+++++.
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEET
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEcC
Confidence 345778999999999999 999999998555 99999987632 1124454 688999999999998 68888888
Q ss_pred CCCCCCceEEEEECCCCceeEEE--e-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEe-eccCCC-ceeEE
Q 015650 150 DPQYPLNKVMIWDDHQSRCIGEL--S-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQI-ETIANP-KGLCA 221 (403)
Q Consensus 150 d~~~~~~~i~iwd~~~~~~~~~~--~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~-~~~~~~-~~~~~ 221 (403)
| +.|++||+.+++.+..+ . |...|.+++|+|++.+++ .|+.|++||+++++.+..+ ..|... +..+.
T Consensus 153 d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 153 D-----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAV 227 (402)
T ss_dssp T-----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEE
T ss_pred C-----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEE
Confidence 8 99999999999999998 5 899999999999998777 4899999999999998888 666665 78899
Q ss_pred EeeCCCeEEEEee--CCccCeEEEEEccCCce--eEE-eecCCceEEEEEcCCCCEEEE-EeCCCcEEEEEEcCCCcE-E
Q 015650 222 VSQGVGSLVLVCP--GLQKGQVRVEHYASKRT--KFI-MAHDSRIACFALTQDGQLLAT-SSTKGTLVRIFNTLDGTL-L 294 (403)
Q Consensus 222 ~~~~~~~~~~~~~--g~~d~~i~v~d~~~~~~--~~~-~~~~~~i~~~~~sp~g~~l~s-~~~dg~~i~iwd~~~~~~-~ 294 (403)
|++++. +++++ ++.|+.|++||++.... ... ..|...+.+++|+|++++|++ ++.|+. |++||+.+++. +
T Consensus 228 ~~~~~~--~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~-i~i~d~~~~~~~~ 304 (402)
T 2aq5_A 228 FVSEGK--ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS-IRYFEITSEAPFL 304 (402)
T ss_dssp ECSTTE--EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSC-EEEEEECSSTTCE
T ss_pred EcCCCc--EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCe-EEEEEecCCCcce
Confidence 998865 34432 15799999999988442 222 357788999999999999975 557999 99999998874 5
Q ss_pred EEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 295 QEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 295 ~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
..+..+.+...|.+++|+|++.++++ .++.+++|++.+++.
T Consensus 305 ~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 305 HYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred EeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 55555446689999999999998875 567999999998653
No 101
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=9e-30 Score=235.34 Aligned_cols=270 Identities=10% Similarity=0.048 Sum_probs=218.6
Q ss_pred CCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEE---ecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEE
Q 015650 86 PTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRR---DFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iw 161 (403)
..+.+++|+|++.+++++.+++ |++||+.+++..... .+. +|...+.++.|++++..+++++.+ +.|++|
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~~ 196 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYK-KKLGFVETISIPEHNELWVSQMQA-----NAVHVF 196 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHH-TTCCEEEEEEEGGGTEEEEEEGGG-----TEEEEE
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCccccc-ccCCceeEEEEcCCCEEEEEECCC-----CEEEEE
Confidence 4566899999777777777554 999999887765221 222 577789999999999999999988 999999
Q ss_pred ECCCCceeEEEe-cCCceeEEEEecCceEEE----ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCC
Q 015650 162 DDHQSRCIGELS-FRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (403)
Q Consensus 162 d~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 236 (403)
|+.+++.+..+. +...+.+++|+|++..++ .++.|++||+++++.+..+..+ ..+..++++|+++.++++..+.
T Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~ 275 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSA 275 (433)
T ss_dssp ETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEES
T ss_pred ECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCC
Confidence 999999998887 888999999999987664 3789999999999888877653 3478889999988665554221
Q ss_pred -----ccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEE-EEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEE
Q 015650 237 -----QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLA 310 (403)
Q Consensus 237 -----~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l-~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 310 (403)
.|+.|++||+++++......|...+.+++|+|++++| ++++.++. |++||+.+++.+..+. +...+.+++
T Consensus 276 ~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-v~v~d~~~~~~~~~~~---~~~~~~~~~ 351 (433)
T 3bws_A 276 SNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSK-IEVYDLKEKKVQKSIP---VFDKPNTIA 351 (433)
T ss_dssp CTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTE-EEEEETTTTEEEEEEE---CSSSEEEEE
T ss_pred CccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCE-EEEEECCCCcEEEEec---CCCCCCeEE
Confidence 4789999999988777666777789999999999765 56688898 9999999999888887 557899999
Q ss_pred eCCCCCEEEEEeC---------------CCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEE
Q 015650 311 FSSNAQWLAVSSD---------------KGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQ 375 (403)
Q Consensus 311 ~s~d~~~l~s~~~---------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (403)
|+|+|++|++++. ||.|++||+.+++. ...
T Consensus 352 ~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~-----------------------------------~~~ 396 (433)
T 3bws_A 352 LSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV-----------------------------------KEF 396 (433)
T ss_dssp ECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE-----------------------------------EEE
T ss_pred EcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE-----------------------------------EEE
Confidence 9999999988876 57999999988763 111
Q ss_pred EEEeCCCceEEEeccCCCEEEEEcc-CC
Q 015650 376 FRLVEGSPYIVAFGHQKNTVVILGM-DG 402 (403)
Q Consensus 376 ~~~~~~~~~~~~fs~d~~~l~~~~~-dG 402 (403)
+.. ...+..++|+|||++|++++. ||
T Consensus 397 ~~~-~~~~~~~~~s~dg~~l~~~~~~d~ 423 (433)
T 3bws_A 397 WEA-GNQPTGLDVSPDNRYLVISDFLDH 423 (433)
T ss_dssp EEC-SSSEEEEEECTTSCEEEEEETTTT
T ss_pred ecC-CCCCceEEEcCCCCEEEEEECCCC
Confidence 222 457889999999999998875 66
No 102
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=1e-30 Score=241.38 Aligned_cols=247 Identities=12% Similarity=0.157 Sum_probs=202.2
Q ss_pred cccCCCCCCeEEEEEcCC-CCEEEEEcCCc-EEEEEcCCC--------eeEEEEecccCcceeEEEEeeeCCeE-EEeeC
Q 015650 79 STSSSPPPTLLHISFNQD-HGCFAAGTDHG-FRIYNCDPF--------REIFRRDFERGGGIGVVEMLFRCNIL-ALVGG 147 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d-~~~l~~~~~~~-i~iw~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~ 147 (403)
.....|.+.|++++|+|+ +.+|++++.++ |+||++... .......+. +|...+.++.|++++. .++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCCCeEEEE
Confidence 445679999999999997 67899988555 999999751 112224454 6888999999999887 88888
Q ss_pred CCCCCCCCceEEEEECCCCce-------eEEEe-cCCceeEEEEec-CceEEE---ecCeEEEEEcCCc---eeeeEeec
Q 015650 148 GPDPQYPLNKVMIWDDHQSRC-------IGELS-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADL---KLLHQIET 212 (403)
Q Consensus 148 ~~d~~~~~~~i~iwd~~~~~~-------~~~~~-~~~~i~~~~~~~-~~~~~~---~d~~i~i~d~~~~---~~~~~~~~ 212 (403)
+.| |.|++|++.++.. ...+. |...|.+++|+| ++.+++ .|+.|++||++++ +.+..+..
T Consensus 201 ~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 201 SDD-----HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp CTT-----SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eCC-----CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 888 9999999987422 34444 888999999999 556665 3899999999986 56777888
Q ss_pred cCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccC--CceeEEeecCCceEEEEEcCCCC-EEEEEeCCCcEEEEEEcC
Q 015650 213 IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTL 289 (403)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~--~~~~~~~~~~~~i~~~~~sp~g~-~l~s~~~dg~~i~iwd~~ 289 (403)
|...+..++|+|++..++++ |+.||.|++||++. ..+..+..|...|.+++|+|+++ +|++++.|+. |+|||+.
T Consensus 276 ~~~~v~~i~~~p~~~~~l~t--g~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~-i~iwd~~ 352 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILAT--GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLS 352 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEE--EETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-CEEEEGG
T ss_pred CCCCeEEEEeCCCCCCEEEE--EeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-EEEEeCC
Confidence 89999999999998765443 35899999999987 44677888999999999999985 6899999999 9999997
Q ss_pred C--------------CcEEEEEecCCCcccEEEEEeCCCCC-EEEEEeCCCcEEEEEeecCC
Q 015650 290 D--------------GTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 290 ~--------------~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~s~~~dg~v~iwd~~~~~ 336 (403)
. .+.+..+.+ |...|++++|+|+++ +|++++.||.|+||++....
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 353 KIGEEQSTEDAEDGPPELLFIHGG--HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp GTTCCCCHHHHHHCCTTEEEECCC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred CCccccCccccccCCcceEEEcCC--CCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 6 255555554 678899999999999 89999999999999998654
No 103
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=2.4e-30 Score=238.94 Aligned_cols=246 Identities=13% Similarity=0.122 Sum_probs=194.7
Q ss_pred CcceeEEEEeeeCC-eEEEeeCCCCCCCCCceEEEEECCC----------CceeEEEe-cCCceeEEEEecCce-EEE--
Q 015650 127 GGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMIWDDHQ----------SRCIGELS-FRSEVRSVKLRRDRI-IVV-- 191 (403)
Q Consensus 127 ~~~~~v~~~~~~~~-~~~~~s~~~d~~~~~~~i~iwd~~~----------~~~~~~~~-~~~~i~~~~~~~~~~-~~~-- 191 (403)
.|...|.++.|+++ ..++++++.+ |.|++|++.+ .+.+..+. |...|.+++|+|++. +++
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~d-----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPS-----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSS-----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred cCCCcEEEEEECCCCCcEEEEECCC-----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 48889999999997 7789999888 9999999987 56677777 899999999999876 665
Q ss_pred -ecCeEEEEEcCCcee-------eeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCC----ceeEEeecCC
Q 015650 192 -LEQKIFVYNFADLKL-------LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK----RTKFIMAHDS 259 (403)
Q Consensus 192 -~d~~i~i~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~----~~~~~~~~~~ 259 (403)
.||.|++||+.++.. ...+..|...+..++|+|++..++++ ++.|+.|++||++.. ....+..|..
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGS--VADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEE--EETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEE--EeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 489999999987322 45566788889999999966554443 347999999999975 4566778999
Q ss_pred ceEEEEEcCCCC-EEEEEeCCCcEEEEEEcCC-CcEEEEEecCCCcccEEEEEeCCCCC-EEEEEeCCCcEEEEEeecCC
Q 015650 260 RIACFALTQDGQ-LLATSSTKGTLVRIFNTLD-GTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 260 ~i~~~~~sp~g~-~l~s~~~dg~~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~s~~~dg~v~iwd~~~~~ 336 (403)
.|.+++|+|++. +|++|+.||. |++||+++ .+++..+.. |...|.+++|+|+++ +|++++.||.|+|||+....
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~-v~vwd~~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred CeEEEEeCCCCCCEEEEEeCCCe-EEEEeCCCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 999999999987 6889999999 99999998 566777775 678999999999995 68999999999999999854
Q ss_pred CCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCC-EEEEEccCCC
Q 015650 337 GSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKN-TVVILGMDGR 403 (403)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~-~l~~~~~dG~ 403 (403)
...... . . ....+ ..+.....|.+.+..++|+|+++ .|++++.||+
T Consensus 356 ~~~~~~-----------~---~-~~~~~------~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~ 402 (430)
T 2xyi_A 356 EEQSTE-----------D---A-EDGPP------ELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNI 402 (430)
T ss_dssp CCCCHH-----------H---H-HHCCT------TEEEECCCCSSCEEEEEECSSSTTEEEEEETTSE
T ss_pred cccCcc-----------c---c-ccCCc------ceEEEcCCCCCCceEEEECCCCCCEEEEEECCCC
Confidence 321100 0 0 00000 01223456677899999999999 8999999884
No 104
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.3e-30 Score=233.56 Aligned_cols=227 Identities=9% Similarity=0.058 Sum_probs=175.2
Q ss_pred EEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC------
Q 015650 92 SFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH------ 164 (403)
Q Consensus 92 ~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~------ 164 (403)
.+.+++.+|++|+ |+.|++||+.+++.... +. ...+..+.++++ +++++.| +.|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~--~~---~~~v~~~~~~~~---~~s~s~D-----~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITT--IT---TPNPRTGGEHPA---IISRGPC-----NRLLLLYPGNQITIL 109 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEE--EE---EECCCTTCCCCS---EEEECST-----TEEEEEETTTEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEE--Ee---cCCceeeeeCCc---eEEecCC-----CeEEEEEccCceEEe
Confidence 3456788999998 55599999988776532 32 245566677777 7888888 999999654
Q ss_pred ---CCceeEEEe--cCCceeEEEEec--CceEEE---ecCeEEEEEcCCceeeeEee-ccCCCceeEEEeeCCCeEEEEe
Q 015650 165 ---QSRCIGELS--FRSEVRSVKLRR--DRIIVV---LEQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVC 233 (403)
Q Consensus 165 ---~~~~~~~~~--~~~~i~~~~~~~--~~~~~~---~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 233 (403)
+++.+..+. |...|.+++|+| ++.+++ .|++|++||+++++.+.... .+...+..++|+|++. ++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~--~las 187 (343)
T 3lrv_A 110 DSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL--LLAL 187 (343)
T ss_dssp ETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC--EEEE
T ss_pred ecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC--EEEE
Confidence 555555555 668899999999 998887 49999999999998876663 3455788999999876 4444
Q ss_pred eCCccCeEEEEEccCCce--eEEee-cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecC-CCcccE--E
Q 015650 234 PGLQKGQVRVEHYASKRT--KFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG-ADRAEI--Y 307 (403)
Q Consensus 234 ~g~~d~~i~v~d~~~~~~--~~~~~-~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~-~~~~~v--~ 307 (403)
|+.|+.|++||++++.. ..+.. |...|.+++|+|+|.+|++++. +. |++||+++++.+..+... .|...+ .
T Consensus 188 -g~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T 3lrv_A 188 -YSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QT-VVCFDLRKDVGTLAYPTYTIPEFKTGTV 264 (343)
T ss_dssp -ECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SB-EEEEETTSSTTCBSSCCCBC-----CCE
T ss_pred -EcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-Ce-EEEEEcCCCCcceeecccccccccccce
Confidence 45899999999998664 46777 9999999999999999999994 48 999999988765544320 011223 4
Q ss_pred EEEeCCCCCEEEEEeC-CCcEEEEEeecCC
Q 015650 308 SLAFSSNAQWLAVSSD-KGTVHVFNLKVNS 336 (403)
Q Consensus 308 ~l~~s~d~~~l~s~~~-dg~v~iwd~~~~~ 336 (403)
+++|+|+|++|++++. |+.|+||++++..
T Consensus 265 ~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 265 TYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 6999999999999998 9999999998766
No 105
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.7e-31 Score=246.38 Aligned_cols=242 Identities=11% Similarity=0.076 Sum_probs=189.8
Q ss_pred cCCCCCCeEEEEEcCC------CCEEEEEc-CCcEEEEEcCCCeeE---------EEEecccCcceeEEEEeeeCCeEEE
Q 015650 81 SSSPPPTLLHISFNQD------HGCFAAGT-DHGFRIYNCDPFREI---------FRRDFERGGGIGVVEMLFRCNILAL 144 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d------~~~l~~~~-~~~i~iw~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~ 144 (403)
+.+|.+.|.+++|+|+ +.+||+++ |+.|+||++...... ....+. +|...+.+++|+++. .|
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~-~h~~~v~sv~~s~~~-~l 280 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS-LADSLITTFDFLSPT-TV 280 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC-CTTTCEEEEEESSSS-EE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE-cCCCCEEEEEecCCC-eE
Confidence 4567889999999997 57999888 555999999765321 012344 678899999998876 58
Q ss_pred eeCCCCCCCCCceEEEEECCCCc-eeEEEe-cCCceeEE--EEecCc-eEEE---ecCeEEEEEcCCceeeeEeeccCC-
Q 015650 145 VGGGPDPQYPLNKVMIWDDHQSR-CIGELS-FRSEVRSV--KLRRDR-IIVV---LEQKIFVYNFADLKLLHQIETIAN- 215 (403)
Q Consensus 145 ~s~~~d~~~~~~~i~iwd~~~~~-~~~~~~-~~~~i~~~--~~~~~~-~~~~---~d~~i~i~d~~~~~~~~~~~~~~~- 215 (403)
++++.| |+|++||+.+++ +...+. |...|.++ .|++++ .+++ .|++|++||+++++++..+.+|..
T Consensus 281 asgs~D-----gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 281 VCGFKN-----GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp EEEETT-----SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred EEEeCC-----CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 888888 999999999774 445566 99999999 578887 6766 499999999999888777766653
Q ss_pred -CceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCC--
Q 015650 216 -PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG-- 291 (403)
Q Consensus 216 -~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~-- 291 (403)
.+..++|+|++.. +++ ++.|+.|++||++... ...+.+|...|.+++|+|+|++|++|+.|++ |++||+..+
T Consensus 356 ~~v~~v~fsp~~~~--l~s-~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt-v~lwd~~~~~~ 431 (524)
T 2j04_B 356 SNLVPVVYCPQIYS--YIY-SDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGS-LIITNAARRLL 431 (524)
T ss_dssp CSCCCEEEETTTTE--EEE-ECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTE-EECCBSCSSTT
T ss_pred CcccceEeCCCcCe--EEE-eCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCE-EEEEechHhhc
Confidence 4678999998774 343 3478999999999855 4678899999999999999999999999999 999985321
Q ss_pred ------------------------------------------cEEEEEecCCCcccEEEEEeCCCCC---EEEEEeCCCc
Q 015650 292 ------------------------------------------TLLQEVRRGADRAEIYSLAFSSNAQ---WLAVSSDKGT 326 (403)
Q Consensus 292 ------------------------------------------~~~~~~~~~~~~~~v~~l~~s~d~~---~l~s~~~dg~ 326 (403)
.++..+. .|...|.+++|+|++. +||+|+.||.
T Consensus 432 ~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~--gh~~~V~~Vafsp~~~~~~~lAsg~~~g~ 509 (524)
T 2j04_B 432 HGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKID--AHGINITCTKWNETSAGGKCYAFSNSAGL 509 (524)
T ss_dssp TCC------CCCCEEEECBCCSSSCEEEECCCCCCCC---------------CCCSCCCEEECCSTTTTTEEEEECTTSE
T ss_pred cccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeec--CCCceEEEEECCCCCCccHHHHhhccCce
Confidence 0111111 2567899999999964 9999999999
Q ss_pred EEEEEeecC
Q 015650 327 VHVFNLKVN 335 (403)
Q Consensus 327 v~iwd~~~~ 335 (403)
|+||+++-.
T Consensus 510 vrlw~l~~~ 518 (524)
T 2j04_B 510 LTLEYLSLE 518 (524)
T ss_dssp EEEEECSCC
T ss_pred EEEEEcccc
Confidence 999998754
No 106
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-29 Score=222.95 Aligned_cols=241 Identities=15% Similarity=0.208 Sum_probs=197.7
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCee-EEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFRE-IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
......|...|.+++|+|++++|++++.++ |++|++..... .....+. +|...+.++.|.++ .+++++.|
T Consensus 52 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~--~l~~~~~d----- 123 (313)
T 3odt_A 52 GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLSFQDG--VVISGSWD----- 123 (313)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEEETT--EEEEEETT-----
T ss_pred EEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh-hcccCEEEEEecCC--EEEEEeCC-----
Confidence 355667899999999999999999998555 99999865421 1124444 68889999999544 56666777
Q ss_pred ceEEEEECCCCceeEEEe-cCCceeEEEEec-CceEEE---ecCeEEEEEcCCceeeeEeec-cCCCceeEEEeeCCCeE
Q 015650 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSL 229 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 229 (403)
+.|++|| .++.+..+. |...+.++.|.+ ++.+++ .|+.|++|| ..+....+.. +...+..+++++++.
T Consensus 124 ~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-- 197 (313)
T 3odt_A 124 KTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-- 197 (313)
T ss_dssp SEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE--
T ss_pred CCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe--
Confidence 9999999 667777777 899999999988 776666 489999999 4566666666 788899999999876
Q ss_pred EEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEE
Q 015650 230 VLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (403)
+++ ++.|+.|++||++.+. ...+..|...|.+++|+|++ .|++++.|+. |++||+.+++++..+.. |...|.+
T Consensus 198 -~~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~-v~iwd~~~~~~~~~~~~--~~~~i~~ 271 (313)
T 3odt_A 198 -FIS-CSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRT-VRIWSKENGSLKQVITL--PAISIWS 271 (313)
T ss_dssp -EEE-EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSE-EEEECTTTCCEEEEEEC--SSSCEEE
T ss_pred -EEE-ccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCE-EEEEECCCCceeEEEec--cCceEEE
Confidence 333 3589999999999754 55677899999999999999 5889999999 99999999999999986 5679999
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEEeecCCCCC
Q 015650 309 LAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (403)
Q Consensus 309 l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~ 339 (403)
++|+|+++ +++++.||.|++||+++++...
T Consensus 272 ~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 272 VDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp EEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred EEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 99999998 5678999999999999987543
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.3e-29 Score=226.63 Aligned_cols=266 Identities=12% Similarity=0.124 Sum_probs=194.8
Q ss_pred CcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCC----ceeEEEe-cCCceeEEEEec--CceEEE---ecCeE
Q 015650 127 GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS----RCIGELS-FRSEVRSVKLRR--DRIIVV---LEQKI 196 (403)
Q Consensus 127 ~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~----~~~~~~~-~~~~i~~~~~~~--~~~~~~---~d~~i 196 (403)
+|...|.++.|++++..+++++.| |.|++||+.++ +.+..+. |...|.+++|+| ++.+++ .|+.|
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccccceeEEEEcCCCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 799999999999999999999999 99999999876 3556666 899999999999 577776 48999
Q ss_pred EEEEcCCc---------eeeeEeeccCCCceeEEEeeC--CCeEEEEeeCCccCeEEEEEccCCce-eEE----------
Q 015650 197 FVYNFADL---------KLLHQIETIANPKGLCAVSQG--VGSLVLVCPGLQKGQVRVEHYASKRT-KFI---------- 254 (403)
Q Consensus 197 ~i~d~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~---------- 254 (403)
++||++++ +.+..+..|...+..++|+++ ++ ++++ ++.|+.|++||++.... ..+
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL--KLAC-LGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS--EEEE-EETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc--EEEE-ecCCCcEEEecCCChHHhccccccccccccc
Confidence 99999886 557778889999999999998 55 3443 34899999999987442 111
Q ss_pred ---eecCCceEEEEEcCC---CCEEEEEeCCCcEEEEEEcCCCcE--EEEEecCCCcccEEEEEeCCCC----CEEEEEe
Q 015650 255 ---MAHDSRIACFALTQD---GQLLATSSTKGTLVRIFNTLDGTL--LQEVRRGADRAEIYSLAFSSNA----QWLAVSS 322 (403)
Q Consensus 255 ---~~~~~~i~~~~~sp~---g~~l~s~~~dg~~i~iwd~~~~~~--~~~~~~~~~~~~v~~l~~s~d~----~~l~s~~ 322 (403)
..|...+.+++|+|+ +.+|++++.++. +.+|+...++. +..+. .|...|++++|+|++ ++|++++
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~--~h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQA-IIYQRGKDGKLHVAAKLP--GHKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEE-EEEEECTTSCEEEEEECC--CCCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCc-EEEEccCCCceeeeeecC--CCCcceeEEEECCCCCCcceEEEEEc
Confidence 257788999999997 999999999999 98888877776 44444 377899999999998 8999999
Q ss_pred CCCcEEEEEeecCCCCCCCCCCCCCCC-CCccccccccc------c---cccc-eeeeeeeeEEEEEeCCCceEEEeccC
Q 015650 323 DKGTVHVFNLKVNSGSARSEPRSTSDP-TLPTSSLSFIK------G---VLPK-YFSSEWSVAQFRLVEGSPYIVAFGHQ 391 (403)
Q Consensus 323 ~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~---~~~~-~~~~~~~~~~~~~~~~~~~~~~fs~d 391 (403)
.||.|++||++++.............. ........+.. . .... .......+..+..|.+.|++++|+|+
T Consensus 238 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 238 KDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT 317 (351)
T ss_dssp TTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSS
T ss_pred CCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCC
Confidence 999999999998754332221110000 00000000000 0 0000 00111223445667789999999999
Q ss_pred CCEEEEEccCCC
Q 015650 392 KNTVVILGMDGR 403 (403)
Q Consensus 392 ~~~l~~~~~dG~ 403 (403)
+++|++|+.||+
T Consensus 318 ~~~l~s~~~dg~ 329 (351)
T 3f3f_A 318 GTILSSAGDDGK 329 (351)
T ss_dssp SCCEEEEETTSC
T ss_pred CCEEEEecCCCc
Confidence 999999999985
No 108
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=234.76 Aligned_cols=241 Identities=14% Similarity=0.176 Sum_probs=192.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcC---CCeeEE--------EEeccc-CcceeEEEEe--eeCCeEEEeeC
Q 015650 83 SPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCD---PFREIF--------RRDFER-GGGIGVVEML--FRCNILALVGG 147 (403)
Q Consensus 83 ~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~---~~~~~~--------~~~~~~-~~~~~v~~~~--~~~~~~~~~s~ 147 (403)
.|...|++++|+|++++|++|+.+ .|++|+++ .++... ...+.. ++...+.++. +++++..++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 589999999999999999999855 59999984 332221 111110 0344555555 56788999999
Q ss_pred CCCCCCCCceEEEEECCCCceeEEEe---cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEee-ccCCCceeE
Q 015650 148 GPDPQYPLNKVMIWDDHQSRCIGELS---FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIE-TIANPKGLC 220 (403)
Q Consensus 148 ~~d~~~~~~~i~iwd~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~ 220 (403)
+.| +.|++||+++++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+. .+...+..+
T Consensus 189 ~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 189 TNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp ETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred eCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEE
Confidence 999 999999999999998887 678999999999998888 48999999999999988876 566678888
Q ss_pred EEeeC--CCeEEEEeeCCccCeEEEEEccCCce-eEEee--------------------------cCCceEEEEEcCCCC
Q 015650 221 AVSQG--VGSLVLVCPGLQKGQVRVEHYASKRT-KFIMA--------------------------HDSRIACFALTQDGQ 271 (403)
Q Consensus 221 ~~~~~--~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~~--------------------------~~~~i~~~~~sp~g~ 271 (403)
+++|. .+..++++ |+.|+.|++||++++.. ..+.+ |...|.+++|+ +++
T Consensus 264 ~~~~~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~ 341 (437)
T 3gre_A 264 EVCQFYGKNSVIVVG-GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK 341 (437)
T ss_dssp EECTTTCTTEEEEEE-ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE
T ss_pred EeccccCCCccEEEE-EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce
Confidence 77764 44556665 55899999999987543 33332 66678999999 789
Q ss_pred EEEEEeCCCcEEEEEEcCCCcEEEEEecCC-----------------------------------CcccEEEEEeCCC--
Q 015650 272 LLATSSTKGTLVRIFNTLDGTLLQEVRRGA-----------------------------------DRAEIYSLAFSSN-- 314 (403)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-----------------------------------~~~~v~~l~~s~d-- 314 (403)
+|++|+.|+. |++||+.+++.+..+..+. |...|++++|+++
T Consensus 342 ~l~s~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~ 420 (437)
T 3gre_A 342 ILLTDEATSS-IVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDE 420 (437)
T ss_dssp EEEEEGGGTE-EEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSS
T ss_pred EEEecCCCCe-EEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCC
Confidence 9999999999 9999999998777776431 6789999999998
Q ss_pred CCEEEEEeCCCcEEEEE
Q 015650 315 AQWLAVSSDKGTVHVFN 331 (403)
Q Consensus 315 ~~~l~s~~~dg~v~iwd 331 (403)
+.+|++|+.||.|+||+
T Consensus 421 ~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 421 TPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp SEEEEEEETTSCEEEEC
T ss_pred ceEEEEEcCCceEEEeC
Confidence 77999999999999995
No 109
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=3.3e-30 Score=235.02 Aligned_cols=258 Identities=12% Similarity=0.013 Sum_probs=167.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEE---EecccCcceeEEEEeeeC--------CeEEEeeCCC
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFR---RDFERGGGIGVVEMLFRC--------NILALVGGGP 149 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~---~~~~~~~~~~v~~~~~~~--------~~~~~~s~~~ 149 (403)
..|...+....+.+++.+|++++ |++|+||+++.++.... ..+. +|...|.+++|+| ++..|++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~-gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKS-GHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTT-SCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccC-CCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 34555555666677888999998 55699999988765432 2344 8999999999987 7899999999
Q ss_pred CCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCce-EEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEee
Q 015650 150 DPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQ 224 (403)
Q Consensus 150 d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 224 (403)
| ++|+|||+.++..+..+. |...+.+++|+|++. +++ .|++|++||+++++.......+........++.
T Consensus 165 D-----~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 165 D-----CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp T-----SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred C-----CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 9 999999998887666655 999999999999874 455 489999999998876655543332222222221
Q ss_pred CCCeEEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEc-CCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCc
Q 015650 225 GVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALT-QDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR 303 (403)
Q Consensus 225 ~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~s-p~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~ 303 (403)
..... .......+|...+.++.|+ |+|+.|++++.|+. +++||+..++....+.. |.
T Consensus 240 ~~~~~-------------------~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~-i~vwd~~~~~~~~~l~~--~~ 297 (393)
T 4gq1_A 240 NTLPL-------------------VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGA-WLRWNLFANNDYNEISD--ST 297 (393)
T ss_dssp ESGGG-------------------C------CCSSSCSEEEEETTTTCEEEEECTTSE-EEEEEC---------------
T ss_pred ccccc-------------------eeeeecccccccceeeeeecCCCCEEEEEeCCCC-EEEEECccCCCCceEee--ec
Confidence 11110 1112234688889999987 79999999999999 99999988776665543 22
Q ss_pred ccEEEEEe------------------CC--CCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccc
Q 015650 304 AEIYSLAF------------------SS--NAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVL 363 (403)
Q Consensus 304 ~~v~~l~~------------------s~--d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (403)
..+..+.+ +| ++.++++|+.||.|+|||+.+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~-------------------------- 351 (393)
T 4gq1_A 298 MKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS-------------------------- 351 (393)
T ss_dssp ------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC--------------------------
T ss_pred CccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE--------------------------
Confidence 33333332 22 344677888999999999998874
Q ss_pred cceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 364 PKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
......+...|..|+|||||++||+++.||
T Consensus 352 ---------~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 352 ---------NSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp ---------CEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred ---------EEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 223456678999999999999999999887
No 110
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=4.9e-28 Score=220.63 Aligned_cols=253 Identities=15% Similarity=0.124 Sum_probs=201.1
Q ss_pred CEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEE-eeCCCCCCCCCceEEEEECCCCceeEEEecC
Q 015650 98 GCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILAL-VGGGPDPQYPLNKVMIWDDHQSRCIGELSFR 175 (403)
Q Consensus 98 ~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~ 175 (403)
.++++++ ++.|++||+.+++.. ..+. +...+.++.|++++..+ ++++.+ +.|++||+.+++.+..+.+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~--~~~~--~~~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~ 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVT--ATIP--VGSNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIATVPAG 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEE--EEEE--CSSSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEEEECS
T ss_pred EEEEEcCCCCEEEEEECCCCeEE--EEee--cCCCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEEEEECC
Confidence 3566776 555999999887765 4454 33458999999998654 666677 99999999999999999866
Q ss_pred CceeEEEEecCceEEE----ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce
Q 015650 176 SEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (403)
Q Consensus 176 ~~i~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~ 251 (403)
..+.+++|+|++..++ .++.|++||+.+++.+..+..+ ..+..++|+++++.++++ +..++.|++||+.+++.
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~--~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVT--NNGDKTVSVINTVTKAV 150 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEE--ETTTTEEEEEETTTTEE
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEE--eCCCCEEEEEECCCCcE
Confidence 7999999999998765 2689999999999888887654 456889999998866554 35789999999998766
Q ss_pred eEEeecCCceEEEEEcCCCCEE-EEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEe---CCCcE
Q 015650 252 KFIMAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSS---DKGTV 327 (403)
Q Consensus 252 ~~~~~~~~~i~~~~~sp~g~~l-~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~---~dg~v 327 (403)
.........+.+++|+|++++| ++++.++. |++||+++++.+..+. +...+.+++|+|++++|++++ .++.|
T Consensus 151 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~~~v 226 (391)
T 1l0q_A 151 INTVSVGRSPKGIAVTPDGTKVYVANFDSMS-ISVIDTVTNSVIDTVK---VEAAPSGIAVNPEGTKAYVTNVDKYFNTV 226 (391)
T ss_dssp EEEEECCSSEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEEE---CSSEEEEEEECTTSSEEEEEEECSSCCEE
T ss_pred EEEEecCCCcceEEECCCCCEEEEEeCCCCE-EEEEECCCCeEEEEEe---cCCCccceEECCCCCEEEEEecCcCCCcE
Confidence 5554445667999999999988 56777888 9999999999888887 456899999999999999888 68999
Q ss_pred EEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEE-EEEccCC
Q 015650 328 HVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTV-VILGMDG 402 (403)
Q Consensus 328 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l-~~~~~dG 402 (403)
++||+.+++. +..+..+ ..+..++|+||+++| ++++.||
T Consensus 227 ~~~d~~~~~~-----------------------------------~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~ 266 (391)
T 1l0q_A 227 SMIDTGTNKI-----------------------------------TARIPVG-PDPAGIAVTPDGKKVYVALSFXN 266 (391)
T ss_dssp EEEETTTTEE-----------------------------------EEEEECC-SSEEEEEECTTSSEEEEEETTTT
T ss_pred EEEECCCCeE-----------------------------------EEEEecC-CCccEEEEccCCCEEEEEcCCCC
Confidence 9999988762 1223332 346789999999988 4556665
No 111
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4.3e-28 Score=209.30 Aligned_cols=242 Identities=11% Similarity=0.087 Sum_probs=167.6
Q ss_pred CeEEEEEcCCCC---EEEEEcCCcEEEEEcCCC---eeEEEEecc----------------------cCcceeEEEEeee
Q 015650 87 TLLHISFNQDHG---CFAAGTDHGFRIYNCDPF---REIFRRDFE----------------------RGGGIGVVEMLFR 138 (403)
Q Consensus 87 ~i~~i~~s~d~~---~l~~~~~~~i~iw~~~~~---~~~~~~~~~----------------------~~~~~~v~~~~~~ 138 (403)
.+.++-|-..|- .++++++..|++|+.... +..+.-.+. .-+...+..++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 466777755443 678888999999999776 433222221 1122356677777
Q ss_pred CC----eEEEeeCCCCC---------------CCCCceEEEEEC-CCCceeEEEe-cCCceeEEEEec---CceEEE---
Q 015650 139 CN----ILALVGGGPDP---------------QYPLNKVMIWDD-HQSRCIGELS-FRSEVRSVKLRR---DRIIVV--- 191 (403)
Q Consensus 139 ~~----~~~~~s~~~d~---------------~~~~~~i~iwd~-~~~~~~~~~~-~~~~i~~~~~~~---~~~~~~--- 191 (403)
++ +..+++++.+. ...++.|++|++ .+|+.+..+. |...+..++|++ ++.+++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS 200 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTT 200 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEE
T ss_pred CCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEec
Confidence 77 66666544200 001278888888 4477777666 777888888888 667777
Q ss_pred ecCeEEEEEcCCceeeeEeeccCC---CceeEEEeeCCCeEEE---------EeeCCccCeEEEEEccCCceeEE-----
Q 015650 192 LEQKIFVYNFADLKLLHQIETIAN---PKGLCAVSQGVGSLVL---------VCPGLQKGQVRVEHYASKRTKFI----- 254 (403)
Q Consensus 192 ~d~~i~i~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~g~~d~~i~v~d~~~~~~~~~----- 254 (403)
.|++|+|||++++++++++.++.. .+..++|+|++..++. +.+|+.|++|++||..+++....
T Consensus 201 ~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~ 280 (356)
T 2w18_A 201 IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL 280 (356)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec
Confidence 399999999999999999976443 4556789998764422 23477899999999998765432
Q ss_pred -eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCccc-EEEEEeCCCCCEEEEEeCCCcEEEEEe
Q 015650 255 -MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAE-IYSLAFSSNAQWLAVSSDKGTVHVFNL 332 (403)
Q Consensus 255 -~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~-v~~l~~s~d~~~l~s~~~dg~v~iwd~ 332 (403)
.+|...+.+..+ ++.++++++.|++ |+|||+.+++++.++.+ |... +..++|+|||++|++|+.|++|+|||+
T Consensus 281 p~Gh~~~~lsg~~--sg~~lASgS~DgT-IkIWDl~tGk~l~tL~g--H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 281 PPGQAGRFLEGDV--KDHCAAAILTSGT-IAIWDLLLGQCTALLPP--VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CTTCCCCEEEEEE--ETTEEEEEETTSC-EEEEETTTCSEEEEECC--C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cCCCcceeEcccc--CCCEEEEEcCCCc-EEEEECCCCcEEEEecC--CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 255555544444 4889999999999 99999999999999986 4444 456899999999999999999999996
Q ss_pred e
Q 015650 333 K 333 (403)
Q Consensus 333 ~ 333 (403)
.
T Consensus 356 ~ 356 (356)
T 2w18_A 356 S 356 (356)
T ss_dssp C
T ss_pred C
Confidence 3
No 112
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=5.3e-30 Score=237.02 Aligned_cols=246 Identities=13% Similarity=0.125 Sum_probs=186.5
Q ss_pred cccCCCCCCeEEEEEcC-CCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 79 STSSSPPPTLLHISFNQ-DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~-d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
..+.+|.+.|++|+|+| ++.+|++|+ |+.|+|||+++.......... .+...+.++.|++++..+++++.| |
T Consensus 158 ~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~d-----g 231 (435)
T 4e54_B 158 IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSD-TINIWFCSLDVSASSRMVVTGDNV-----G 231 (435)
T ss_dssp ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCS-SCSCCCCCEEEETTTTEEEEECSS-----S
T ss_pred EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccC-CCCccEEEEEECCCCCEEEEEeCC-----C
Confidence 34678999999999998 688999998 555999999876543322222 345567889999999999999999 9
Q ss_pred eEEEEECCCCceeEEEe-cCCceeEEEEecCce-EEE---ecCeEEEEEcCCceeeeE---eeccCCCceeEEEeeCCCe
Q 015650 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQ---IETIANPKGLCAVSQGVGS 228 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~d~~i~i~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 228 (403)
.|++||+. ++.+..+. |...|.+++|+|++. +++ .|+.|++||+++.+.... ...|...|..++|+|++..
T Consensus 232 ~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~ 310 (435)
T 4e54_B 232 NVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR 310 (435)
T ss_dssp BEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE
T ss_pred cEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCe
Confidence 99999986 45566666 899999999999875 444 489999999988665433 3567888999999998874
Q ss_pred EEEEeeCCccCeEEEEEccCCc-eeEEeecCC------ceEEEEEcCCCCEEEEEeC------------CCcEEEEEEcC
Q 015650 229 LVLVCPGLQKGQVRVEHYASKR-TKFIMAHDS------RIACFALTQDGQLLATSST------------KGTLVRIFNTL 289 (403)
Q Consensus 229 ~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~------~i~~~~~sp~g~~l~s~~~------------dg~~i~iwd~~ 289 (403)
+++ ++.|+.|++||++... ...+..|.. .+....|+|++.++++++. ++. |++||..
T Consensus 311 --l~s-~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-i~iwd~~ 386 (435)
T 4e54_B 311 --LLT-TDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRT-IDVFDGN 386 (435)
T ss_dssp --EEE-EESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCC-EEEECSS
T ss_pred --eEE-EcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCE-EEEEECC
Confidence 443 3489999999998854 334444432 2334567777777666542 356 9999999
Q ss_pred CCcEEEEEecCCCcccEEEE-EeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 290 DGTLLQEVRRGADRAEIYSL-AFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~l-~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
+++.+..+..+ |...|.++ +|+|+|++|++|+ |+.|+||++++++.
T Consensus 387 ~g~~~~~l~~~-~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 387 SGKMMCQLYDP-ESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp SCCEEEEECCS-SCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred CCcEEEEEeCC-CCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 99999888754 66788887 6999999999876 78999999998873
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=249.15 Aligned_cols=236 Identities=13% Similarity=0.175 Sum_probs=196.4
Q ss_pred CcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC--CCceeEEEe-cCCceeEEEEecC--ceEEE---ecCeEEE
Q 015650 127 GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH--QSRCIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFV 198 (403)
Q Consensus 127 ~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~--~~~~~~~~~-~~~~i~~~~~~~~--~~~~~---~d~~i~i 198 (403)
+|...|.++.|++++..+++++.| |.|++||+. +++.+..+. |...|.+++|+++ +.+++ .||.|++
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred cCcceeEEEEECCCCCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 799999999999999999999998 999999998 556677777 9999999999987 77777 4899999
Q ss_pred EEcCCce--eeeEeeccCCCceeEEEeeC--CCeEEEEeeCCccCeEEEEEccCC---ceeEEeecCCceEEEEEcC---
Q 015650 199 YNFADLK--LLHQIETIANPKGLCAVSQG--VGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQ--- 268 (403)
Q Consensus 199 ~d~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~d~~i~v~d~~~~---~~~~~~~~~~~i~~~~~sp--- 268 (403)
||+.+++ .+..+..|...+..++|+|+ ++ ++++ |+.||.|++||++.. ....+..|...|.+++|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~--~l~s-gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP--LLLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCS--EEEE-EETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCC--EEEE-EeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 9999886 67777889999999999998 55 3443 348999999999885 3456778999999999999
Q ss_pred ----------CCCEEEEEeCCCcEEEEEEcCCC----cEEEEEecCCCcccEEEEEeCCC---CCEEEEEeCCCcEEEEE
Q 015650 269 ----------DGQLLATSSTKGTLVRIFNTLDG----TLLQEVRRGADRAEIYSLAFSSN---AQWLAVSSDKGTVHVFN 331 (403)
Q Consensus 269 ----------~g~~l~s~~~dg~~i~iwd~~~~----~~~~~~~~~~~~~~v~~l~~s~d---~~~l~s~~~dg~v~iwd 331 (403)
++.+|++|+.||. |++||++++ ..+..+.. |...|++++|+|+ +++|++++.||.|++||
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~-I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp --------CGGGCCEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred ccccccccCCCCCEEEEEECCCe-EEEEeccCCcccceeeeeecC--CCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 5899999999999 999999877 44455554 7789999999999 89999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCCC
Q 015650 332 LKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
+.+++...... ......+.+.+++++|+|+|++|++|+.||+
T Consensus 236 ~~~~~~~~~~~------------------------------~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~ 277 (753)
T 3jro_A 236 QDNEQGPWKKT------------------------------LLKEEKFPDVLWRASWSLSGNVLALSGGDNK 277 (753)
T ss_dssp ESSSSSCCBCC------------------------------BSSSSCCSSCCCCEEECTTTCCEEEECSSSC
T ss_pred CCCCCCcceeE------------------------------EeccCCCCCceEEEEEcCCCCEEEEEcCCCE
Confidence 99876311110 0001234567899999999999999999984
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4e-31 Score=242.61 Aligned_cols=222 Identities=8% Similarity=-0.008 Sum_probs=177.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEE
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iw 161 (403)
.+|...|.+++|+|+| .++.+.+|+ .+......+ .+...|.+++|+|++..+++++.+ |.|++|
T Consensus 49 ~gh~~~v~~V~FsPdg------~~~~~~~~~---~~~~~~~~~--~~~~~V~~vawSPdG~~LAs~s~d-----g~V~iw 112 (588)
T 2j04_A 49 NCNSKNLFHVKEFPLE------FENKLDFEL---AQQNGLLNS--QPVCYPRVCKPSPIDDWMAVLSNN-----GNVSVF 112 (588)
T ss_dssp SSBGGGTEEEEEECCC------CCCTTTTSC---CCSSCSSTT--SCSCCEEEEEECSSSSCEEEEETT-----SCEEEE
T ss_pred cCCCccEEEEEECCCC------CcceEEEEe---CCCceEeec--CCCCcEEEEEECCCCCEEEEEeCC-----CcEEEE
Confidence 6899999999999999 344455554 332211333 357889999999999999999999 999999
Q ss_pred ECCCCceeEEEecCC-----ceeEEEEecCceEEE---ecCeEEEEEcCCcee-------eeEe----eccCCCceeEEE
Q 015650 162 DDHQSRCIGELSFRS-----EVRSVKLRRDRIIVV---LEQKIFVYNFADLKL-------LHQI----ETIANPKGLCAV 222 (403)
Q Consensus 162 d~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~-------~~~~----~~~~~~~~~~~~ 222 (403)
|... ++..+.|.. .+.+++|+|||++++ .||+|++||+.+++. +.++ .+|...|..++|
T Consensus 113 d~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVaw 190 (588)
T 2j04_A 113 KDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVW 190 (588)
T ss_dssp ETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEE
T ss_pred eCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEE
Confidence 9544 555555443 499999999999999 399999999988753 5666 556679999999
Q ss_pred eeCCCeEEEEeeCCccCeEEEEEccCCce----eEE-eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEE
Q 015650 223 SQGVGSLVLVCPGLQKGQVRVEHYASKRT----KFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEV 297 (403)
Q Consensus 223 ~~~~~~~~~~~~g~~d~~i~v~d~~~~~~----~~~-~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~ 297 (403)
+|++ ++++ +.|+.|++||+.++.. ..+ .+|...|.+++|+ |.+||+++ +++ |++||+.+++.....
T Consensus 191 SPdg---Laas--s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~t-IkLWd~~~~~~~~~~ 261 (588)
T 2j04_A 191 YEDV---LVAA--LSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGY-VHKIDLKNYSISSLK 261 (588)
T ss_dssp ETTE---EEEE--ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSE-EEEEETTTTEEEEEE
T ss_pred cCCc---EEEE--eCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCe-EEEEECCCCeEEEEE
Confidence 9987 3332 3699999999988664 345 4788999999999 68999887 588 999999887774333
Q ss_pred ecCCCcccEEEEEe--CCCCCEEEEEeCCCcEEEEEee
Q 015650 298 RRGADRAEIYSLAF--SSNAQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 298 ~~~~~~~~v~~l~~--s~d~~~l~s~~~dg~v~iwd~~ 333 (403)
.+ |...|.+++| +||++.|+++++||+ ++|.++
T Consensus 262 ~g--h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 262 TG--SLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CS--CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred cC--CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 33 7899999999 999999999999999 999987
No 115
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=3.6e-29 Score=232.23 Aligned_cols=240 Identities=11% Similarity=0.162 Sum_probs=182.1
Q ss_pred cceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc-----------eeEEEe-cC------------CceeEEEE
Q 015650 128 GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR-----------CIGELS-FR------------SEVRSVKL 183 (403)
Q Consensus 128 ~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~-----------~~~~~~-~~------------~~i~~~~~ 183 (403)
+...|.++.|++++.+|++++.| |.|+|||+.+++ .+..+. |. ..|.+++|
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKG-----GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETT-----SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred ccCcEEEEEECCCCCEEEEEcCC-----CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence 67899999999999999999999 999999998876 466676 76 88999999
Q ss_pred ecCc--eEEE---ecCeEEEEEcCCceee---------------------------------------eE-eeccCCCce
Q 015650 184 RRDR--IIVV---LEQKIFVYNFADLKLL---------------------------------------HQ-IETIANPKG 218 (403)
Q Consensus 184 ~~~~--~~~~---~d~~i~i~d~~~~~~~---------------------------------------~~-~~~~~~~~~ 218 (403)
+|++ ..++ .|++|++||+.+++.. .. ...|...+.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 9997 4444 5999999999764432 12 356888999
Q ss_pred eEEEeeCCCeEEEEeeCCccCeEEEEEccC-CceeE--------EeecCCceEEEEEcCCC-CEEEEEeCCCcEEEEEEc
Q 015650 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKF--------IMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNT 288 (403)
Q Consensus 219 ~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~-~~~~~--------~~~~~~~i~~~~~sp~g-~~l~s~~~dg~~i~iwd~ 288 (403)
.++|+++++ ++++ | .|+.|++||++. ..... +..|...|.+++|+|++ ++|++|+.|+. |++||+
T Consensus 182 ~~~~~~~~~--~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-i~iwd~ 256 (447)
T 3dw8_B 182 SISINSDYE--TYLS-A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT-IRLCDM 256 (447)
T ss_dssp EEEECTTSS--EEEE-E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC-EEEEET
T ss_pred EEEEcCCCC--EEEE-e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe-EEEEEC
Confidence 999999877 4444 4 699999999984 33222 44789999999999998 99999999999 999999
Q ss_pred CCCcE----EEEEecCCCcc------------cEEEEEeCCCCCEEEEEeCCCcEEEEEeec-CCCCCCCCCCCCCCCCC
Q 015650 289 LDGTL----LQEVRRGADRA------------EIYSLAFSSNAQWLAVSSDKGTVHVFNLKV-NSGSARSEPRSTSDPTL 351 (403)
Q Consensus 289 ~~~~~----~~~~~~~~~~~------------~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~ 351 (403)
++++. +..+.. |.. .|.+++|+|+|++|++++. +.|++||+++ ++....+..+.....
T Consensus 257 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~-- 331 (447)
T 3dw8_B 257 RASALCDRHSKLFEE--PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRS-- 331 (447)
T ss_dssp TTCSSSCTTCEEECC--C-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTT--
T ss_pred cCCccccceeeEecc--CCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccc--
Confidence 99886 677775 333 8999999999999999998 9999999987 554332221100000
Q ss_pred cccccccccccccceeeeeeeeEEEEEeCC---CceEEEeccCCCEEEEEccCCC
Q 015650 352 PTSSLSFIKGVLPKYFSSEWSVAQFRLVEG---SPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
.+...+ ... .+..++|+|++++|++|+.||+
T Consensus 332 ----------~l~~~~-----------~~~~i~~~~~~~~s~~~~~l~s~s~dg~ 365 (447)
T 3dw8_B 332 ----------KLCSLY-----------ENDCIFDKFECCWNGSDSVVMTGSYNNF 365 (447)
T ss_dssp ----------THHHHH-----------HTSGGGCCCCEEECTTSSEEEEECSTTE
T ss_pred ----------cccccc-----------cccccccceEEEECCCCCEEEEeccCCE
Confidence 000000 001 1234899999999999999984
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.5e-28 Score=227.26 Aligned_cols=235 Identities=14% Similarity=0.300 Sum_probs=190.7
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 77 AESTSSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 77 ~~~~~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
....+.+|...|.+++| ++++|++|+.+ .|++||+.+++.. ..+. +|...+.++.|+++ .+++++.|
T Consensus 165 ~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~l~~~~~--~l~s~s~d----- 232 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML--NTLI-HHCEAVLHLRFNNG--MMVTCSKD----- 232 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE--EEEC-CCCSCEEEEECCTT--EEEEEETT-----
T ss_pred EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE--EEEc-CCCCcEEEEEEcCC--EEEEeeCC-----
Confidence 34567789999999999 78899999855 5999999888765 5565 68889999999866 66777777
Q ss_pred ceEEEEECCCCcee---EEEe-cCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCe
Q 015650 156 NKVMIWDDHQSRCI---GELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (403)
Q Consensus 156 ~~i~iwd~~~~~~~---~~~~-~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (403)
|.|++||+.+++.+ ..+. |...|.+++| ++.+++ .|+.|++||+++++.+..+..|...+..+.+. ++
T Consensus 233 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~- 307 (435)
T 1p22_A 233 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DR- 307 (435)
T ss_dssp SCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TT-
T ss_pred CcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CC-
Confidence 99999999988765 3444 8899999999 444444 48999999999999999999998888877774 33
Q ss_pred EEEEeeCCccCeEEEEEccCCc-eeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCc---------EEEEEe
Q 015650 229 LVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT---------LLQEVR 298 (403)
Q Consensus 229 ~~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~---------~~~~~~ 298 (403)
++++ |+.|+.|++||++++. +..+.+|...|.+++| ++.+|++|+.||. |++||+.+++ ++..+.
T Consensus 308 -~l~~-g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~ 382 (435)
T 1p22_A 308 -LVVS-GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-IKVWDLVAALDPRAPAGTLCLRTLV 382 (435)
T ss_dssp -EEEE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC-EEEEEHHHHTSTTSCTTTTEEEEEC
T ss_pred -EEEE-EeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc-EEEEECCCCCCccccccchheeecc
Confidence 3443 4589999999999754 5667889999999999 7899999999999 9999997766 777777
Q ss_pred cCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 299 RGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 299 ~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
. |...|.+++| ++++|++++.||.|++||+.+...
T Consensus 383 ~--h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 383 E--HSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp C--CSSCCCCEEE--CSSCEEECCSSSEEEEEC------
T ss_pred C--CCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence 5 7789999999 788999999999999999998764
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2e-28 Score=220.87 Aligned_cols=245 Identities=13% Similarity=0.148 Sum_probs=199.1
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEecccCcceeEEEEee--eCCeEEEeeCCCCCCCCC
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLF--RCNILALVGGGPDPQYPL 155 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~s~~~d~~~~~ 155 (403)
..+.+|...|++++|+|++++|++++.++ |++|++.+.+.. ... .|...+.++.| ++++..+++++.|
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~--~~~--~~~~~v~~~~~~~~~~~~~l~~~~~d----- 150 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI--QIA--QHDAPVKTIHWIKAPNYSCVMTGSWD----- 150 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEE--ECSSCEEEEEEEECSSCEEEEEEETT-----
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce--eec--cccCceEEEEEEeCCCCCEEEEccCC-----
Confidence 56778999999999999999999998554 999999887755 333 48889999999 8999999999998
Q ss_pred ceEEEEECCCCceeEEEecCCceeEEEEecCceEEE-ecCeEEEEEcCCceeeeEe--eccCCCceeEEEeeCCCe--EE
Q 015650 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQI--ETIANPKGLCAVSQGVGS--LV 230 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~ 230 (403)
+.|++||+.+++.+..+.....+.++.+.++..+++ .++.+++|+++........ .........+++.++... ..
T Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (368)
T 3mmy_A 151 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTG 230 (368)
T ss_dssp SEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEE
T ss_pred CcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCe
Confidence 999999999999999999777888888888766665 6899999999875433222 223345566676665542 22
Q ss_pred EEeeCCccCeEEEEEccCC----ceeEEeecCC------------ceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEE
Q 015650 231 LVCPGLQKGQVRVEHYASK----RTKFIMAHDS------------RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLL 294 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~~----~~~~~~~~~~------------~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~ 294 (403)
+++ ++.|+.|++||++.. ....+..|.. .|.+++|+|++++|++++.||. |++||+.+++++
T Consensus 231 ~~~-~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-i~iwd~~~~~~~ 308 (368)
T 3mmy_A 231 FAL-GSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-FSFWDKDARTKL 308 (368)
T ss_dssp EEE-EETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC-EEEEETTTTEEE
T ss_pred EEE-ecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe-EEEEECCCCcEE
Confidence 333 458999999999884 3455666665 7999999999999999999999 999999999999
Q ss_pred EEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 295 QEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 295 ~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
..+.. |...|++++|+|+|++|++++.|+..+.|++...+
T Consensus 309 ~~~~~--~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 309 KTSEQ--LDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQ 348 (368)
T ss_dssp EECCC--CSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCTT
T ss_pred EEecC--CCCCceEEEECCCCCeEEEEecccccccccccCCC
Confidence 88885 67899999999999999999999877766665544
No 118
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.9e-28 Score=219.09 Aligned_cols=234 Identities=11% Similarity=0.053 Sum_probs=186.5
Q ss_pred cCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc----eeEEEecCCceeEEEEecCce-EEE---ecCeEE
Q 015650 126 RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR----CIGELSFRSEVRSVKLRRDRI-IVV---LEQKIF 197 (403)
Q Consensus 126 ~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~----~~~~~~~~~~i~~~~~~~~~~-~~~---~d~~i~ 197 (403)
.+|...|.++.|++++..+++++.| +.|++|++.+++ ......|...|.+++|+|++. +++ .|+.|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCC-----CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence 3788999999999999999999888 999999998887 444445999999999999998 776 489999
Q ss_pred EEEc-CCceeeeEeec--cCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccC---------CceeEEeecCCceEEEE
Q 015650 198 VYNF-ADLKLLHQIET--IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS---------KRTKFIMAHDSRIACFA 265 (403)
Q Consensus 198 i~d~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~---------~~~~~~~~~~~~i~~~~ 265 (403)
+||+ .+++. ..+.. |...+..++|++ ++. +++ ++.|+.|++||++. ........|...|.+++
T Consensus 83 ~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~--l~s-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 157 (342)
T 1yfq_A 83 KVDLIGSPSF-QALTNNEANLGICRICKYG-DDK--LIA-ASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157 (342)
T ss_dssp EECSSSSSSE-EECBSCCCCSCEEEEEEET-TTE--EEE-EETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEE
T ss_pred EEEeccCCce-EeccccCCCCceEEEEeCC-CCE--EEE-EcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEE
Confidence 9999 77654 66777 889999999999 553 333 34899999999886 44333334889999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEEcCC-CcEEEEEecCCCcccEEEEEeCC-CCCEEEEEeCCCcEEEEEeecCC--CCCCC
Q 015650 266 LTQDGQLLATSSTKGTLVRIFNTLD-GTLLQEVRRGADRAEIYSLAFSS-NAQWLAVSSDKGTVHVFNLKVNS--GSARS 341 (403)
Q Consensus 266 ~sp~g~~l~s~~~dg~~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~-d~~~l~s~~~dg~v~iwd~~~~~--~~~~~ 341 (403)
|+|++ |++++.|+. |++||+++ +..........+...|.+++|+| ++++|++++.||.|++|+++... ....
T Consensus 158 ~~~~~--l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~- 233 (342)
T 1yfq_A 158 TNSSR--LIVGMNNSQ-VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS- 233 (342)
T ss_dssp ECSSE--EEEEESTTE-EEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT-
T ss_pred ecCCc--EEEEeCCCe-EEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc-
Confidence 99987 889999999 99999988 55422222223678999999999 99999999999999999998871 1000
Q ss_pred CCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeC---------CCceEEEeccCCCEEEEEccCCC
Q 015650 342 EPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVE---------GSPYIVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~fs~d~~~l~~~~~dG~ 403 (403)
....++.+. ..+.+++|+|++++|++++.||+
T Consensus 234 ------------------------------~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 274 (342)
T 1yfq_A 234 ------------------------------KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI 274 (342)
T ss_dssp ------------------------------TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC
T ss_pred ------------------------------cceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce
Confidence 011233333 38999999999999999999984
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=4.2e-27 Score=214.43 Aligned_cols=241 Identities=12% Similarity=0.087 Sum_probs=197.8
Q ss_pred CCeEEEEEcCCCCEE-EEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEE-eeCCCCCCCCCceEEEEE
Q 015650 86 PTLLHISFNQDHGCF-AAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILAL-VGGGPDPQYPLNKVMIWD 162 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l-~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~~~~~~i~iwd 162 (403)
..+.+++|+|+|++| ++++ ++.|++||+.+++.. ..+. +...+..++|++++..+ +++..+ +.|++||
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~--~~~~--~~~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d 102 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--ATVP--AGSSPQGVAVSPDGKQVYVTNMAS-----STLSVID 102 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--EEEE--CSSSEEEEEECTTSSEEEEEETTT-----TEEEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE--EEEE--CCCCccceEECCCCCEEEEEECCC-----CEEEEEE
Confidence 458999999999977 5554 566999999887765 4444 22388999999987755 566666 8999999
Q ss_pred CCCCceeEEEecCCceeEEEEecCceEEE----ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCcc
Q 015650 163 DHQSRCIGELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (403)
Q Consensus 163 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 238 (403)
+.+++.+..+.+...+.+++|+|++..++ .++.|++||+++++.+..+..+. .+..++++++++.++++ +..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~--~~~~ 179 (391)
T 1l0q_A 103 TTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVA--NFDS 179 (391)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEE--ETTT
T ss_pred CCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEE--eCCC
Confidence 99999998888777899999999998663 38899999999999888887654 45888999998865544 3578
Q ss_pred CeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEe---CCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCC
Q 015650 239 GQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS---TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNA 315 (403)
Q Consensus 239 ~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~---~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~ 315 (403)
+.|++||++++.......+...+.+++|+|+|++|++++ .++. |++||+.+++.+..+..+ ..+.+++|+|++
T Consensus 180 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg 255 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT-VSMIDTGTNKITARIPVG---PDPAGIAVTPDG 255 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCE-EEEEETTTTEEEEEEECC---SSEEEEEECTTS
T ss_pred CEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCc-EEEEECCCCeEEEEEecC---CCccEEEEccCC
Confidence 999999999987766666778899999999999999888 6888 999999999998888853 468999999999
Q ss_pred CEE-EEEeCCCcEEEEEeecCCCCCCCC
Q 015650 316 QWL-AVSSDKGTVHVFNLKVNSGSARSE 342 (403)
Q Consensus 316 ~~l-~s~~~dg~v~iwd~~~~~~~~~~~ 342 (403)
++| ++++.|+.|++||+.+++....+.
T Consensus 256 ~~l~~s~~~d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 256 KKVYVALSFXNTVSVIDTATNTITATMA 283 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEEEEE
Confidence 987 566889999999999877654443
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=1.8e-27 Score=217.75 Aligned_cols=245 Identities=11% Similarity=0.121 Sum_probs=186.7
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC---CeEEEeeCCCCCCCCCc
Q 015650 82 SSPPPTLLHISFNQ-DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC---NILALVGGGPDPQYPLN 156 (403)
Q Consensus 82 ~~~~~~i~~i~~s~-d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~s~~~d~~~~~~ 156 (403)
.+|...|.+++|+| ++.+|++++ ++.|++|++.+.+... .+. +...+..+.+.+ ++..+++++.+ +
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 166 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTAD--VFN--FEETVYSHHMSPVSTKHCLVAVGTRG-----P 166 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEE--EEE--CSSCEEEEEECSSCSSCCEEEEEESS-----S
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccce--ecc--CCCceeeeEeecCCCCCcEEEEEcCC-----C
Confidence 46999999999999 778888888 5559999999887663 343 455677777766 45578888888 9
Q ss_pred eEEEEECCCCceeEEEe-cCCceeEEEEecCce-EEE---ecCeEEEEEcCCce-eeeEe---------------eccCC
Q 015650 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLK-LLHQI---------------ETIAN 215 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~d~~i~i~d~~~~~-~~~~~---------------~~~~~ 215 (403)
.|++||+.+++.+..+. |...|.+++|+|++. +++ .|+.|++||++++. .+..+ ..|..
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG 246 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS
T ss_pred eEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccC
Confidence 99999999999999888 999999999999987 344 48999999998764 33333 45777
Q ss_pred CceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEE-ee-----cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcC
Q 015650 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFI-MA-----HDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (403)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~-~~-----~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~ 289 (403)
.+..++|+|+++.+ ++ ++.|+.|++||++++..... .. ....+........+..+++++.++. |++||+.
T Consensus 247 ~v~~~~~~~~~~~l--~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~d~~ 322 (408)
T 4a11_B 247 KVNGLCFTSDGLHL--LT-VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGST-IAVYTVY 322 (408)
T ss_dssp CEEEEEECTTSSEE--EE-EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTE-EEEEETT
T ss_pred ceeEEEEcCCCCEE--EE-ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCE-EEEEECc
Confidence 88999999987743 33 34799999999988553221 11 1112222222334556677788898 9999999
Q ss_pred CCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCC
Q 015650 290 DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARS 341 (403)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~ 341 (403)
+++.+..+.. |...|++++|+|++++|++++.||.|++||+++++.....
T Consensus 323 ~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 323 SGEQITMLKG--HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp TCCEEEEECC--CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred CCcceeeecc--CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 9999999986 6789999999999999999999999999999998865443
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=8.8e-27 Score=215.27 Aligned_cols=240 Identities=13% Similarity=0.115 Sum_probs=198.9
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEE-eeCCCCCCCCCce
Q 015650 80 TSSSPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILAL-VGGGPDPQYPLNK 157 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~~~~~~ 157 (403)
.+.+|...|.+++|+++++++++++. +.|++|++++.+.. ..+. .+...+..+.|++++..+ +++..+ +.
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-----~~ 235 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK--ATVD-LTGKWSKILLYDPIRDLVYCSNWIS-----ED 235 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE--EEEE-CSSSSEEEEEEETTTTEEEEEETTT-----TE
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE--EEEc-CCCCCeeEEEEcCCCCEEEEEecCC-----Cc
Confidence 34578899999999999999999984 55999999887665 4444 577789999999987655 566567 99
Q ss_pred EEEEECCCCceeEEEecCCceeEEEEecCceEEE--e---------cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCC
Q 015650 158 VMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--L---------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGV 226 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (403)
|++||+.+++.+..+.....+.+++|+|++.+++ . |+.|++||+++++.+..+. +...+..+++++++
T Consensus 236 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g 314 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTE 314 (433)
T ss_dssp EEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSST
T ss_pred EEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCC
Confidence 9999999999888888767799999999997666 2 5699999999988777663 34467789999998
Q ss_pred CeEEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeC---------------CCcEEEEEEcCCC
Q 015650 227 GSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSST---------------KGTLVRIFNTLDG 291 (403)
Q Consensus 227 ~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~---------------dg~~i~iwd~~~~ 291 (403)
+.++++. ..++.|++||+.+++......+...+.+++|+|+|++|++++. ||. |++||+.++
T Consensus 315 ~~l~~~~--~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~-v~~~d~~~~ 391 (433)
T 3bws_A 315 NKIYVSD--MCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK-VYVIDTTTD 391 (433)
T ss_dssp TEEEEEE--TTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE-EEEEETTTT
T ss_pred CEEEEEe--cCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE-EEEEECCCC
Confidence 8665543 5789999999998776665568888999999999999988876 468 999999999
Q ss_pred cEEEEEecCCCcccEEEEEeCCCCCEEEEEeC-CCcEEEEEeec
Q 015650 292 TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSD-KGTVHVFNLKV 334 (403)
Q Consensus 292 ~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~-dg~v~iwd~~~ 334 (403)
+.+..+.. ...+.+++|+|+|++|++++. |+.|++|+++.
T Consensus 392 ~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 392 TVKEFWEA---GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEEEC---SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred cEEEEecC---CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 99988874 357999999999999988874 99999999864
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.8e-26 Score=214.38 Aligned_cols=242 Identities=9% Similarity=0.041 Sum_probs=189.7
Q ss_pred cCCCCCCeEEEEEcCCCCEE-EEEc-CCcEEEEEcC--CCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 81 SSSPPPTLLHISFNQDHGCF-AAGT-DHGFRIYNCD--PFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l-~~~~-~~~i~iw~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
..+|.+.|++++|+|++++| ++|+ |+.|+||++. +++........ .+...+.++.|++++..+++++.+ |
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~-----g 171 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF-CFSKRPNAISIAEDDTTVIIADKF-----G 171 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE-ECSSCEEEEEECTTSSEEEEEETT-----S
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc-cCCCCceEEEEcCCCCEEEEEeCC-----C
Confidence 45688899999999999996 7887 5559999998 65554222211 366789999999999999999888 9
Q ss_pred eEEEEECCCCceeE----EEe-cCCceeEEEEecC---ceEEE---ecCeEEEEEcCCceeeeE-eeccCCCceeEEEee
Q 015650 157 KVMIWDDHQSRCIG----ELS-FRSEVRSVKLRRD---RIIVV---LEQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQ 224 (403)
Q Consensus 157 ~i~iwd~~~~~~~~----~~~-~~~~i~~~~~~~~---~~~~~---~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~ 224 (403)
.|++|++.+++... .+. |...|.+++|+|+ +.+++ .|++|++||+++++.+.. +.+|...+..++|+
T Consensus 172 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s- 250 (450)
T 2vdu_B 172 DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG- 250 (450)
T ss_dssp EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-
T ss_pred cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-
Confidence 99999998887553 555 8899999999999 88777 489999999999888877 55788999999999
Q ss_pred CCCeEEEEeeCCccCeEEEEEccCCce-eEEee-------------------------cCCceEEEEEcCCCCEEEEEe-
Q 015650 225 GVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMA-------------------------HDSRIACFALTQDGQLLATSS- 277 (403)
Q Consensus 225 ~~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~~-------------------------~~~~i~~~~~sp~g~~l~s~~- 277 (403)
+++. +++ ++.|+.|++||+++++. ..+.. ....|.+++|+|++++|++++
T Consensus 251 d~~~--l~s-~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~ 327 (450)
T 2vdu_B 251 KDYL--LLS-AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE 327 (450)
T ss_dssp STTE--EEE-EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET
T ss_pred CCCE--EEE-EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC
Confidence 7663 343 34899999999998654 33432 235689999999999999998
Q ss_pred CCCcEEEEEEc--CCC---cEEEEEecCCCcccEEEEEeCCCCCEEEEEeC------CCcEEEEEeecCC
Q 015650 278 TKGTLVRIFNT--LDG---TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSD------KGTVHVFNLKVNS 336 (403)
Q Consensus 278 ~dg~~i~iwd~--~~~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~------dg~v~iwd~~~~~ 336 (403)
.++. |+||++ .++ +.+..+.. + ..|.+++|+|++.++++++. +..|.+|.++...
T Consensus 328 ~d~~-i~iw~~~~~~~~~l~~~~~~~~--~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~ 393 (450)
T 2vdu_B 328 ATKC-IIILEMSEKQKGDLALKQIITF--P-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNE 393 (450)
T ss_dssp TCSE-EEEEEECSSSTTCEEEEEEEEC--S-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTT
T ss_pred CCCe-EEEEEeccCCCCceeeccEecc--C-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCC
Confidence 7888 999999 555 66667774 3 78999999996444444332 5568999987654
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=7.2e-27 Score=209.95 Aligned_cols=234 Identities=13% Similarity=0.113 Sum_probs=170.6
Q ss_pred EEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceE
Q 015650 110 IYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRII 189 (403)
Q Consensus 110 iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~ 189 (403)
||.+.+...+ ..+. .|...|.+++|++++..+++++.+ .+++|++.+++.+....+. .+..+.+.+++..
T Consensus 3 i~s~~~~~~~--~~~~-~h~~~V~~v~fs~dg~~la~g~~~------~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 72 (355)
T 3vu4_A 3 LGSMITRNPI--VPEN-HVSNPVTDYEFNQDQSCLILSTLK------SFEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNY 72 (355)
T ss_dssp -------------------CCCCCEEEECTTSSEEEEECSS------EEEEEEETTEEEEEEEECS-CCCEEEECTTSSE
T ss_pred cccccccCCc--cccc-cCCCceEEEEECCCCCEEEEEcCC------EEEEEecCCcceeeeeecC-CeEEEEEcCCCCE
Confidence 4555444333 3333 688999999999999999998875 4789999888766655433 5778888887766
Q ss_pred EE----ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCC--ceeEEeecCCceEE
Q 015650 190 VV----LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK--RTKFIMAHDSRIAC 263 (403)
Q Consensus 190 ~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~--~~~~~~~~~~~i~~ 263 (403)
++ .|++|++||+.+++.+..+. +...+..+.++++ .++++ .++.|++||+.+. .+..+.. ....
T Consensus 73 ~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~----~~~~i~i~d~~~~~~~~~~~~~---~~~~ 142 (355)
T 3vu4_A 73 VAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSRE--FIVVS----YGDVISVFKFGNPWKRITDDIR---FGGV 142 (355)
T ss_dssp EEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSS--EEEEE----ETTEEEEEESSTTCCBSSCCEE---EEEE
T ss_pred EEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCC--EEEEE----EcCEEEEEECCCCceeeEEecc---CCce
Confidence 54 36799999999999988886 4556777777654 33332 4789999999876 3333333 4455
Q ss_pred EEEcCCCCEEEE--EeCCCcEEEEEEcCCCc----------------EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCC
Q 015650 264 FALTQDGQLLAT--SSTKGTLVRIFNTLDGT----------------LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG 325 (403)
Q Consensus 264 ~~~sp~g~~l~s--~~~dg~~i~iwd~~~~~----------------~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg 325 (403)
+++++ .++++ |+.||. |++||+.+++ ++..+.+ |...|++++|+|+|++|++++.||
T Consensus 143 ~~~s~--~~la~~sg~~~g~-v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~--h~~~v~~~~~s~~g~~l~s~s~d~ 217 (355)
T 3vu4_A 143 CEFSN--GLLVYSNEFNLGQ-IHITKLQSSGSATTQDQGVQQKAILGKGVLIKA--HTNPIKMVRLNRKSDMVATCSQDG 217 (355)
T ss_dssp EEEET--TEEEEEESSCTTC-EEEEECCC------------------CCEEECC--CSSCEEEEEECTTSSEEEEEETTC
T ss_pred EEEEc--cEEEEeCCCcCcE-EEEEECCCCCccccccccccccccCcccEEEEc--cCCceEEEEECCCCCEEEEEeCCC
Confidence 66777 56666 578999 9999998865 1456664 788999999999999999999999
Q ss_pred c-EEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEE-E-eCCCceEEEeccCCCEEEEEccCC
Q 015650 326 T-VHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFR-L-VEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 326 ~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
+ |++||+++++. +..++ + |.+.|.+++|+|||++|++++.||
T Consensus 218 ~~v~iwd~~~~~~-----------------------------------~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 218 TIIRVFKTEDGVL-----------------------------------VREFRRGLDRADVVDMKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp SEEEEEETTTCCE-----------------------------------EEEEECTTCCSCEEEEEECTTSCEEEEEETTC
T ss_pred CEEEEEECCCCcE-----------------------------------EEEEEcCCCCCcEEEEEECCCCCEEEEEECCC
Confidence 8 99999998873 33355 3 778999999999999999999998
Q ss_pred C
Q 015650 403 R 403 (403)
Q Consensus 403 ~ 403 (403)
+
T Consensus 263 ~ 263 (355)
T 3vu4_A 263 T 263 (355)
T ss_dssp E
T ss_pred E
Confidence 4
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=5.4e-26 Score=196.26 Aligned_cols=228 Identities=12% Similarity=0.136 Sum_probs=158.0
Q ss_pred eEEEEeeeC---CeEEEeeCCCCCCCCCceEEEEECCCC---ceeEEEe-cCC-------------------------ce
Q 015650 131 GVVEMLFRC---NILALVGGGPDPQYPLNKVMIWDDHQS---RCIGELS-FRS-------------------------EV 178 (403)
Q Consensus 131 ~v~~~~~~~---~~~~~~s~~~d~~~~~~~i~iwd~~~~---~~~~~~~-~~~-------------------------~i 178 (403)
.+..+.|.. ....+++++. ..|++|+..++ +++.++. |+. .|
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~------~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v 114 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE------DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREI 114 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES------SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEE
T ss_pred EEeeeeeccCCCCccEEEEecc------ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccce
Confidence 344444433 3346777776 69999999888 6666666 443 35
Q ss_pred eEEEEecC----ceEEEe-----------------------cCeEEEEEc-CCceeeeEeeccCCCceeEEEee-CCCeE
Q 015650 179 RSVKLRRD----RIIVVL-----------------------EQKIFVYNF-ADLKLLHQIETIANPKGLCAVSQ-GVGSL 229 (403)
Q Consensus 179 ~~~~~~~~----~~~~~~-----------------------d~~i~i~d~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 229 (403)
..++++|| +..++. |+.|++|++ .+++.+..+..|...+..++|++ ++++.
T Consensus 115 ~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~ 194 (356)
T 2w18_A 115 RALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQE 194 (356)
T ss_dssp EEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTT
T ss_pred EEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCc
Confidence 56666667 555441 566777777 34666666777777777888887 44444
Q ss_pred EEEeeCCccCeEEEEEccCCc-eeEEeecC---CceEEEEEcCCCCEE------------EEEeCCCcEEEEEEcCCCcE
Q 015650 230 VLVCPGLQKGQVRVEHYASKR-TKFIMAHD---SRIACFALTQDGQLL------------ATSSTKGTLVRIFNTLDGTL 293 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~-~~~~~~~~---~~i~~~~~sp~g~~l------------~s~~~dg~~i~iwd~~~~~~ 293 (403)
++++ |+.|++|+|||+++++ +..+.+|. ..+.+++|+|+|.++ ++|+.|++ |++||..+++.
T Consensus 195 ~LaS-gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t-IklWd~~tgk~ 272 (356)
T 2w18_A 195 ALLG-TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ-LIVINPKTTLS 272 (356)
T ss_dssp EEEE-EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE-EEEEETTTTEE
T ss_pred eEEE-ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE-EEEEECCCCEE
Confidence 5665 4589999999999865 56676554 367788999999987 56778899 99999999998
Q ss_pred EEEEe---cCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeee
Q 015650 294 LQEVR---RGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSE 370 (403)
Q Consensus 294 ~~~~~---~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (403)
+..+. ...|...+.+..++ +.++++++.|++|+|||+.+++.
T Consensus 273 l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~--------------------------------- 317 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQC--------------------------------- 317 (356)
T ss_dssp EEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSE---------------------------------
T ss_pred EEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcE---------------------------------
Confidence 87653 11244445555543 78999999999999999999884
Q ss_pred eeeEEEEEeCCCce-EEEeccCCCEEEEEccCCC
Q 015650 371 WSVAQFRLVEGSPY-IVAFGHQKNTVVILGMDGR 403 (403)
Q Consensus 371 ~~~~~~~~~~~~~~-~~~fs~d~~~l~~~~~dG~ 403 (403)
+..++.|.+.+. .++|||||++|++|+.||+
T Consensus 318 --l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~T 349 (356)
T 2w18_A 318 --TALLPPVSDQHWSFVKWSGTDSHLLAGQKDGN 349 (356)
T ss_dssp --EEEECCC--CCCCEEEECSSSSEEEEECTTSC
T ss_pred --EEEecCCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 334555655544 5899999999999999986
No 125
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.9e-27 Score=210.18 Aligned_cols=221 Identities=15% Similarity=0.196 Sum_probs=168.4
Q ss_pred eeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE--ecCeEEEEEcC---------Cc
Q 015650 136 LFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFA---------DL 204 (403)
Q Consensus 136 ~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~d~~i~i~d~~---------~~ 204 (403)
.+..++..+++++.| |.|++||+.+++.+..+. ...|.++.++|+ ++. .|++|++|+.. ++
T Consensus 43 ~~~~d~~~l~sg~~D-----g~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCED-----GALHFTQLKDSKTITTIT-TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEEEEEEEET-----TEEEEEEESSSSCEEEEE-EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCEEEEECCC-----CcEEEEECCCCcEEEEEe-cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCc
Confidence 344578889999999 999999999999888876 456777778887 333 47788888654 55
Q ss_pred eeeeEee-ccCCCceeEEEee--CCCeEEEEeeCCccCeEEEEEccCCceeEEe--ecCCceEEEEEcCCCCEEEEEeCC
Q 015650 205 KLLHQIE-TIANPKGLCAVSQ--GVGSLVLVCPGLQKGQVRVEHYASKRTKFIM--AHDSRIACFALTQDGQLLATSSTK 279 (403)
Q Consensus 205 ~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~--~~~~~i~~~~~sp~g~~l~s~~~d 279 (403)
+.++.+. .|...+..++++| +++ ++++ ++.|+.|++||++++...... .|...+.+++|+|+|.+|++|+.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~--~l~s-~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTE--YFIW-ADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CC--EEEE-EETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCC--EEEE-EeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC
Confidence 5455443 4557788999999 665 4444 348999999999987764433 455689999999999999999999
Q ss_pred CcEEEEEEcCCCcEE-EEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCccccccc
Q 015650 280 GTLVRIFNTLDGTLL-QEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSF 358 (403)
Q Consensus 280 g~~i~iwd~~~~~~~-~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (403)
|. |+|||+++++.+ ..+.. .|...|++++|+|++.+|++++ |+.|++||+++.+....+...
T Consensus 192 g~-i~iwd~~~~~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~-------------- 254 (343)
T 3lrv_A 192 GI-LDVYNLSSPDQASSRFPV-DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTY-------------- 254 (343)
T ss_dssp SC-EEEEESSCTTSCCEECCC-CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCC--------------
T ss_pred CE-EEEEECCCCCCCccEEec-cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccc--------------
Confidence 99 999999999887 67765 2678999999999999999999 459999999998754333200
Q ss_pred ccccccceeeeeeeeEEEEEeCCCc--eEEEeccCCCEEEEEcc-CC
Q 015650 359 IKGVLPKYFSSEWSVAQFRLVEGSP--YIVAFGHQKNTVVILGM-DG 402 (403)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~fs~d~~~l~~~~~-dG 402 (403)
..+...+ .+++|+|+|++|++++. |+
T Consensus 255 ------------------~~~~~~~~~~~~~~~~~g~~l~~~s~~d~ 283 (343)
T 3lrv_A 255 ------------------TIPEFKTGTVTYDIDDSGKNMIAYSNESN 283 (343)
T ss_dssp ------------------BC-----CCEEEEECTTSSEEEEEETTTT
T ss_pred ------------------ccccccccceEEEECCCCCEEEEecCCCC
Confidence 0011111 46999999999999887 65
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.1e-26 Score=212.99 Aligned_cols=272 Identities=13% Similarity=0.057 Sum_probs=198.3
Q ss_pred CCeEEEEEcCCCC-EEEEEc-----CC----cEEEEEc--CCCeeEEEEecccCcceeEEEEeee---------------
Q 015650 86 PTLLHISFNQDHG-CFAAGT-----DH----GFRIYNC--DPFREIFRRDFERGGGIGVVEMLFR--------------- 138 (403)
Q Consensus 86 ~~i~~i~~s~d~~-~l~~~~-----~~----~i~iw~~--~~~~~~~~~~~~~~~~~~v~~~~~~--------------- 138 (403)
..+....|.+.|. ++++|+ ++ .|+|||+ .+++.+....+. +|...+..+++.
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYK-VNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEE-ECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEE-cChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 3567778888874 555664 34 4999999 888766555565 555555555544
Q ss_pred -CCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE---ec---CeEEEEEcCCceeeeEe
Q 015650 139 -CNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LE---QKIFVYNFADLKLLHQI 210 (403)
Q Consensus 139 -~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~d---~~i~i~d~~~~~~~~~~ 210 (403)
....++++.... .-..+.|++||+..+. ...+. |...+.+++|+|||..++ .+ ..|++||+++++.. .+
T Consensus 142 ~~~~l~~~s~~~~-~~~~~~i~i~d~~g~~-~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l 218 (415)
T 2hqs_A 142 FRTRIAYVVQTNG-GQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QV 218 (415)
T ss_dssp TTCEEEEEEECSS-SSCCEEEEEEETTSCS-CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EE
T ss_pred CCCEEEEEEecCC-CCccceEEEEcCCCCC-CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Ee
Confidence 223333333211 0001589999987544 45555 889999999999998887 24 39999999988765 45
Q ss_pred eccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCC-C--cEEEEEE
Q 015650 211 ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTK-G--TLVRIFN 287 (403)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~d-g--~~i~iwd 287 (403)
..+...+..++|+|+++.++++.....+..|++||+.+++...+..|...+.+++|+|||++|++++.+ + . |++||
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~-i~~~d 297 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQ-VYKVN 297 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCE-EEEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcE-EEEEE
Confidence 566778889999999987665543323456999999998888888899999999999999999988764 4 5 78889
Q ss_pred cCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCC---CcEEEEEeecCCCCCCCCCCCCCCCCCccccccccccccc
Q 015650 288 TLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK---GTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLP 364 (403)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (403)
+.+++.. .+.. +...+.+++|+|||++|++++.+ ..|++||+.+++.
T Consensus 298 ~~~~~~~-~l~~--~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~--------------------------- 347 (415)
T 2hqs_A 298 INGGAPQ-RITW--EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--------------------------- 347 (415)
T ss_dssp TTSSCCE-ECCC--SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE---------------------------
T ss_pred CCCCCEE-EEec--CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE---------------------------
Confidence 9887753 3332 45678999999999999988754 5899999988762
Q ss_pred ceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 365 KYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
..+..+ ..+..++|+|||++|++++.|+
T Consensus 348 ---------~~l~~~-~~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 348 ---------QVLSST-FLDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp ---------EECCCS-SSCEEEEECTTSSEEEEEEEET
T ss_pred ---------EEecCC-CCcCCeEEcCCCCEEEEEEcCC
Confidence 111122 2677899999999999988765
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=9.5e-26 Score=206.80 Aligned_cols=263 Identities=11% Similarity=0.038 Sum_probs=196.8
Q ss_pred cCCCCCCeEEEEEcC--------------CCCEEEEEc-C------CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC
Q 015650 81 SSSPPPTLLHISFNQ--------------DHGCFAAGT-D------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC 139 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~--------------d~~~l~~~~-~------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 139 (403)
+.+|...+..+++++ .+..++.++ + +.|++||++.... +.+. +|...+.++.|+|
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~---~~l~-~~~~~v~~~~~Sp 188 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ---FVVH-RSPQPLMSPAWSP 188 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC---EEEE-EESSCEEEEEECT
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCC---EEEe-CCCCcceeeEEcC
Confidence 455555566555554 145555544 3 3599999975432 3343 4778899999999
Q ss_pred CeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE-e---c--CeEEEEEcCCceeeeEeecc
Q 015650 140 NILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-L---E--QKIFVYNFADLKLLHQIETI 213 (403)
Q Consensus 140 ~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~---d--~~i~i~d~~~~~~~~~~~~~ 213 (403)
++..++.++.+.. ...|++||+.+++......+...+.+++|+|||..++ . + ..|++||+++++. ..+..+
T Consensus 189 dg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~ 265 (415)
T 2hqs_A 189 DGSKLAYVTFESG--RSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDG 265 (415)
T ss_dssp TSSEEEEEECTTS--SCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCC
T ss_pred CCCEEEEEEecCC--CcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCC
Confidence 9988887765500 0399999999998765444888999999999998766 2 3 4599999988765 556667
Q ss_pred CCCceeEEEeeCCCeEEEEeeCCccC--eEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCC---CcEEEEEEc
Q 015650 214 ANPKGLCAVSQGVGSLVLVCPGLQKG--QVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTK---GTLVRIFNT 288 (403)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~g~~d~--~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~d---g~~i~iwd~ 288 (403)
...+..++|+|+++.+++.+ ..++ .|.+||+.++....+..+...+.+++|+|+|++|++++.+ .. |++||+
T Consensus 266 ~~~~~~~~~spdg~~l~~~s--~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~-i~~~d~ 342 (415)
T 2hqs_A 266 RSNNTEPTWFPDSQNLAFTS--DQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH-IAKQDL 342 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEE--CTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEE-EEEEET
T ss_pred CCcccceEECCCCCEEEEEE--CCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceE-EEEEEC
Confidence 77888999999998766554 2334 6888899888877777788889999999999999988765 46 999999
Q ss_pred CCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCC---cEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccc
Q 015650 289 LDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG---TVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPK 365 (403)
Q Consensus 289 ~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (403)
.+++.. .+.. + ..+.+++|+|||++|++++.++ .|++||++.+.
T Consensus 343 ~~~~~~-~l~~--~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~----------------------------- 389 (415)
T 2hqs_A 343 ATGGVQ-VLSS--T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF----------------------------- 389 (415)
T ss_dssp TTCCEE-ECCC--S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC-----------------------------
T ss_pred CCCCEE-EecC--C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc-----------------------------
Confidence 988874 4443 3 3799999999999999888776 79999987443
Q ss_pred eeeeeeeeEEEEEeCCCceEEEeccCCC
Q 015650 366 YFSSEWSVAQFRLVEGSPYIVAFGHQKN 393 (403)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~fs~d~~ 393 (403)
..++..+.+.+..++|+|...
T Consensus 390 -------~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 390 -------KARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp -------EEECCCSSSEEEEEEECCCCC
T ss_pred -------EEEeeCCCCCCcCCccccccc
Confidence 223455667899999999653
No 128
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=6.8e-24 Score=190.28 Aligned_cols=266 Identities=14% Similarity=0.115 Sum_probs=201.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEc--------CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeE-EEeeCCCCCCCC
Q 015650 84 PPPTLLHISFNQDHGCFAAGT--------DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNIL-ALVGGGPDPQYP 154 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~--------~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~~~ 154 (403)
....+..++|+|+|++|++++ ++.|.+||..+++... .+. .......+.+++++. ++++...+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~--~~~--~~~~~~~~~~s~dg~~l~v~~~~~---- 110 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQ--AIH--NDLKPFGATINNTTQTLWFGNTVN---- 110 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEE--EEE--ESSCCCSEEEETTTTEEEEEETTT----
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEE--EEe--cCCCcceEEECCCCCEEEEEecCC----
Confidence 345688999999999888776 2349999998877653 333 223356778888765 55555656
Q ss_pred CceEEEEECCCCceeEEEec-CC---------ceeEEEEecCceEEE--e---cCeEEEEEcCCceeeeEeeccCCCcee
Q 015650 155 LNKVMIWDDHQSRCIGELSF-RS---------EVRSVKLRRDRIIVV--L---EQKIFVYNFADLKLLHQIETIANPKGL 219 (403)
Q Consensus 155 ~~~i~iwd~~~~~~~~~~~~-~~---------~i~~~~~~~~~~~~~--~---d~~i~i~d~~~~~~~~~~~~~~~~~~~ 219 (403)
+.|.+||..+++.+..+.. .. .+.+++|+|++..++ . ++.|++||+.+++.+..+..+......
T Consensus 111 -~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 189 (353)
T 3vgz_A 111 -SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTG 189 (353)
T ss_dssp -TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCC
T ss_pred -CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccce
Confidence 8999999999998888873 21 268899999987655 2 678999999999988888755556788
Q ss_pred EEEeeCCCeEEEEeeCCccCeEEEEEccCCceeE-Eee----cCCceEEEEEcCCCCEEEEEeCC-CcEEEEEEcCCCcE
Q 015650 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKF-IMA----HDSRIACFALTQDGQLLATSSTK-GTLVRIFNTLDGTL 293 (403)
Q Consensus 220 ~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~-~~~----~~~~i~~~~~sp~g~~l~s~~~d-g~~i~iwd~~~~~~ 293 (403)
++++++++.++++. .++.|.+||..+++... +.. +...+..++|+|+|++|+.++.+ +. |.+||+.+++.
T Consensus 190 ~~~s~dg~~l~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-v~~~d~~~~~~ 265 (353)
T 3vgz_A 190 LALDSEGKRLYTTN---ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE-VLVVDTRNGNI 265 (353)
T ss_dssp CEEETTTTEEEEEC---TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE-EEEEETTTCCE
T ss_pred EEECCCCCEEEEEc---CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE-EEEEECCCCcE
Confidence 99999998766553 58999999998866543 332 45568889999999988777665 67 99999999999
Q ss_pred EEEEecCCCcccEEEEEeCCCCCEEEEEe-CCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeee
Q 015650 294 LQEVRRGADRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWS 372 (403)
Q Consensus 294 ~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (403)
+..+..+ . ...++|+|+|++++++. .++.|.+||+.+++.
T Consensus 266 ~~~~~~~---~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~----------------------------------- 306 (353)
T 3vgz_A 266 LAKVAAP---E-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV----------------------------------- 306 (353)
T ss_dssp EEEEECS---S-CCCEEEETTTTEEEEEETTTTEEEEEETTTTEE-----------------------------------
T ss_pred EEEEEcC---C-CceEEECCCCCEEEEEECCCCeEEEEECCCCeE-----------------------------------
Confidence 8888753 1 25699999999766555 789999999988763
Q ss_pred eEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 373 VAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 373 ~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
...+.. ...+..++|+|||++|+++..+|
T Consensus 307 ~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 307 VKTFDT-PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEEC-CSEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEec-CCCCCeEEEcCCCCEEEEEEccc
Confidence 111222 23578899999999998887764
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=2.2e-24 Score=203.79 Aligned_cols=266 Identities=11% Similarity=0.122 Sum_probs=203.6
Q ss_pred EEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEEC--CCCce
Q 015650 92 SFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD--HQSRC 168 (403)
Q Consensus 92 ~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~--~~~~~ 168 (403)
+|+|++.+++++. ++.|.+||..+++.. ..+..++. +..+.|++++.++++++.+ +.|++||+ .+++.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~--~~i~~g~~--~~~v~~spdg~~l~v~~~d-----~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIV--KVIDTGYA--VHISRMSASGRYLLVIGRD-----ARIDMIDLWAKEPTK 214 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEE--EEEECSTT--EEEEEECTTSCEEEEEETT-----SEEEEEETTSSSCEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEE--EEEecCcc--cceEEECCCCCEEEEECCC-----CeEEEEECcCCCCcE
Confidence 3889998888887 455999999888765 44542333 7789999999999998888 99999999 88999
Q ss_pred eEEEecCCceeEEEEec----CceEEE----ecCeEEEEEcCCceeeeEeecc-----------CCCceeEEEeeCCCeE
Q 015650 169 IGELSFRSEVRSVKLRR----DRIIVV----LEQKIFVYNFADLKLLHQIETI-----------ANPKGLCAVSQGVGSL 229 (403)
Q Consensus 169 ~~~~~~~~~i~~~~~~~----~~~~~~----~d~~i~i~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 229 (403)
+..+.+...+..++|+| |+++++ .+++|.+||..++++++.+... ...+..+.+++++..+
T Consensus 215 ~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 215 VAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp EEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred EEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 88888777889999999 998776 3799999999999998887652 1256778899988765
Q ss_pred EEEeeCCccCeEEEEEccCCce-e-EEeecCCceEEEEEcCCCCEEEEEe-CCCcEEEEEEcCCCcEEEEEecCC--Ccc
Q 015650 230 VLVCPGLQKGQVRVEHYASKRT-K-FIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTLLQEVRRGA--DRA 304 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~~-~-~~~~~~~~i~~~~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~~~~~~~~~--~~~ 304 (403)
++.. ..++.|.+||+..... . ....+...+.++.|+|+|++|++++ .+++ |.+||+.+++++..+..+. |.+
T Consensus 295 ~vs~--~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~-v~v~D~~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 295 IVNV--KETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNK-VAVIDSKDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp EEEE--TTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSBCCT
T ss_pred EEEE--CCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCe-EEEEECCCCeEEEeeccCCCCCCC
Confidence 5543 5789999999987432 2 1234667788999999999877655 5778 9999999999998887532 333
Q ss_pred cEEEEEeCCC-CCEEEEEe-CCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeee-eeEEEEEeCC
Q 015650 305 EIYSLAFSSN-AQWLAVSS-DKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEW-SVAQFRLVEG 381 (403)
Q Consensus 305 ~v~~l~~s~d-~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 381 (403)
....+ ++|+ +.+++++. .|++|.+||+++.+... ..| .+.++..+.+
T Consensus 372 ~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~-----------------------------~~~~~v~~l~~~g~ 421 (543)
T 1nir_A 372 RGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ-----------------------------YAWKKVAELQGQGG 421 (543)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT-----------------------------TBTSEEEEEECSCS
T ss_pred CCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCch-----------------------------hcCeEEEEEEcCCC
Confidence 33333 4677 66667765 68999999999843100 011 2445677777
Q ss_pred CceEEEeccCCCEEEEEc
Q 015650 382 SPYIVAFGHQKNTVVILG 399 (403)
Q Consensus 382 ~~~~~~fs~d~~~l~~~~ 399 (403)
.+..++|||||++|++++
T Consensus 422 ~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 422 GSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp CCCCEECCTTCCEEEECC
T ss_pred CceEEEcCCCCCcEEEec
Confidence 778899999999999986
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=2.3e-24 Score=212.73 Aligned_cols=237 Identities=14% Similarity=0.070 Sum_probs=181.0
Q ss_pred CCCeEEEEEcCCCCEEEEEc--CC-----cEEEEEcCCCeeEEEEecccCcc----------------------eeEEEE
Q 015650 85 PPTLLHISFNQDHGCFAAGT--DH-----GFRIYNCDPFREIFRRDFERGGG----------------------IGVVEM 135 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~--~~-----~i~iw~~~~~~~~~~~~~~~~~~----------------------~~v~~~ 135 (403)
...|.+++|+|||++|++++ ++ .|++|++.+++........ .+. ..+..+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSK-VVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGG-GTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchh-hcccccccccchhhhhhhhhhhccccCccee
Confidence 45799999999999999887 44 5999999887755333222 121 346788
Q ss_pred eeeCCeEEEeeCCCCCCCCCceEEEEECCCC---ceeEEEecCCceeEEEEecCceEEE--ecCeEEEEEcCCceeeeEe
Q 015650 136 LFRCNILALVGGGPDPQYPLNKVMIWDDHQS---RCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQI 210 (403)
Q Consensus 136 ~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~ 210 (403)
.|++|+..++.++. +.|++||+.++ +......+...+..++|+|||+.++ .++.|++||+.+++.....
T Consensus 115 ~~SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp EECTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECC
T ss_pred EECCCCCEEEEEeC------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEec
Confidence 99999988777664 79999999988 5443333778899999999999887 6889999999988765544
Q ss_pred eccCCC----------------ceeEEEeeCCCeEEEEeeCCccC---------------------------------eE
Q 015650 211 ETIANP----------------KGLCAVSQGVGSLVLVCPGLQKG---------------------------------QV 241 (403)
Q Consensus 211 ~~~~~~----------------~~~~~~~~~~~~~~~~~~g~~d~---------------------------------~i 241 (403)
..+... +..++|+|+++.++++. .|+ .|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~---~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR---IDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE---EECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEE---EcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 332221 36799999999876654 222 78
Q ss_pred EEEEccC-CceeEEe---ecCCceEEEEEcCCCCEEEEEeC-----CCcEEEEEEcCCCcEEEEEecCCCcc---cEEEE
Q 015650 242 RVEHYAS-KRTKFIM---AHDSRIACFALTQDGQLLATSST-----KGTLVRIFNTLDGTLLQEVRRGADRA---EIYSL 309 (403)
Q Consensus 242 ~v~d~~~-~~~~~~~---~~~~~i~~~~~sp~g~~l~s~~~-----dg~~i~iwd~~~~~~~~~~~~~~~~~---~v~~l 309 (403)
.+||+.+ ++...+. .|...+..++| |||++|++++. +.. |++||+.+++....+..+ ... .+..+
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~ 342 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD-LVEVTLASNQQRVLAHET-SPTWVPLHNSL 342 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE-EEEEETTTCCEEEEEEEE-CSSCCCCCSCC
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE-EEEEECCCCceEEEEEcC-CCCcCCcCCce
Confidence 8889888 7766554 47788999999 99999987654 456 999999999887776642 112 45689
Q ss_pred EeCCCCCEEEEEeCCCcEEEEEeec
Q 015650 310 AFSSNAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 310 ~~s~d~~~l~s~~~dg~v~iwd~~~ 334 (403)
+|+|||+++++++.||.++||.++.
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~ 367 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDS 367 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECS
T ss_pred EECCCCeEEEEecCCCccEEEEEcC
Confidence 9999999999999999999998874
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=3.8e-23 Score=195.27 Aligned_cols=270 Identities=14% Similarity=0.124 Sum_probs=198.3
Q ss_pred eEEEEEcCCCCEEEEEc-CCcEEEEEc--CCCeeEEEEecccCcceeEEEEeeeC----CeEEEeeCC-CCCCCCCceEE
Q 015650 88 LLHISFNQDHGCFAAGT-DHGFRIYNC--DPFREIFRRDFERGGGIGVVEMLFRC----NILALVGGG-PDPQYPLNKVM 159 (403)
Q Consensus 88 i~~i~~s~d~~~l~~~~-~~~i~iw~~--~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~s~~-~d~~~~~~~i~ 159 (403)
+.+++|+|||++|++++ ++.|++||+ .+.+.. ..+. +......++|++ ++..+++++ .+ ++|.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~--~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~-----~~v~ 251 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV--AEIK--IGIEARSVESSKFKGYEDRYTIAGAYWP-----PQFA 251 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE--EEEE--CCSEEEEEEECCSTTCTTTEEEEEEEES-----SEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE--EEEe--cCCCcceEEeCCCcCCCCCEEEEEEccC-----CeEE
Confidence 88999999999999887 555999999 665544 5565 445678999999 887776665 35 8999
Q ss_pred EEECCCCceeEEEec------------CCceeEEEEecCceEEE----ecCeEEEEEcCCceeee--EeeccCCCceeEE
Q 015650 160 IWDDHQSRCIGELSF------------RSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLH--QIETIANPKGLCA 221 (403)
Q Consensus 160 iwd~~~~~~~~~~~~------------~~~i~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~ 221 (403)
+||..+++++..+.. ...+..+.+++++..++ .+++|.+||+.+.+.+. .+. +......+.
T Consensus 252 v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~ 330 (543)
T 1nir_A 252 IMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGG 330 (543)
T ss_dssp EEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEE
T ss_pred EEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCce
Confidence 999999999888762 12688999999765544 37899999998866544 443 445567899
Q ss_pred EeeCCCeEEEEeeCCccCeEEEEEccCCceeE-Eee----cCCceEEEEEcCC-CCEEEEEe-CCCcEEEEEEcCC----
Q 015650 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRTKF-IMA----HDSRIACFALTQD-GQLLATSS-TKGTLVRIFNTLD---- 290 (403)
Q Consensus 222 ~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~-~~~----~~~~i~~~~~sp~-g~~l~s~~-~dg~~i~iwd~~~---- 290 (403)
|+|+++.++++. ..++.|.+||..++++.. +.. |.+....+ ++|+ |.+++++. .|++ |.|||+.+
T Consensus 331 ~spdg~~l~va~--~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~-V~v~d~~~~~~~ 406 (543)
T 1nir_A 331 WDSSHRYFMTAA--NNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGS-ISLIGTDPKNHP 406 (543)
T ss_dssp ECTTSCEEEEEE--GGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE-EEEEECCTTTCT
T ss_pred ECCCCCEEEEEe--cCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCce-EEEEEeCCCCCc
Confidence 999988665543 467899999999876544 332 54433333 5777 66666665 5788 99999988
Q ss_pred ---CcEEEEEecCCCcccEEEEEeCCCCCEEEEEe-------CCCcEEEEEeecCCCCCCCCCCCCCCCCCccccccccc
Q 015650 291 ---GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSS-------DKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIK 360 (403)
Q Consensus 291 ---~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (403)
+++++++.. |...+..++|+|||++|++++ .+++|.+||+++.+...+.
T Consensus 407 ~~~~~~v~~l~~--~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~------------------- 465 (543)
T 1nir_A 407 QYAWKKVAELQG--QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQV------------------- 465 (543)
T ss_dssp TTBTSEEEEEEC--SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEE-------------------
T ss_pred hhcCeEEEEEEc--CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEE-------------------
Confidence 899999996 556788899999999999987 2779999999998842110
Q ss_pred ccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEc
Q 015650 361 GVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILG 399 (403)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~ 399 (403)
++ -..|. -+..+...+..++|+|||++|+++.
T Consensus 466 --~~---v~~~~--~~~~~~~~~~~~~~~~~g~~~~~s~ 497 (543)
T 1nir_A 466 --LP---IAEWA--DLGEGAKRVVQPEYNKRGDEVWFSV 497 (543)
T ss_dssp --EC---HHHHH--CCCSSCCEEEEEEECSSSSEEEEEE
T ss_pred --ee---chhhc--ccCCCCCceEeccCCCCCCEEEEEe
Confidence 00 00000 0111234677899999999999773
No 132
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=2.2e-24 Score=196.54 Aligned_cols=227 Identities=13% Similarity=0.034 Sum_probs=146.6
Q ss_pred cccCCCCCCeEEEEEcC--------CCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCe-EEEeeCC
Q 015650 79 STSSSPPPTLLHISFNQ--------DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNI-LALVGGG 148 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~--------d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~ 148 (403)
..+.+|.+.|++++|+| |+++||+|+ |++|+|||+.+..... .+. .|...+.+++|+|++ ..+++++
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~--~~~-~~~~~v~~v~~~p~~~~~l~~~~ 206 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPIL--AGY-PLSSPGISVQFRPSNPNQLIVGE 206 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEE--EEE-ECSSCEEEEEEETTEEEEEEEEE
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceee--eec-CCCCCcEEEEECCCCCceEEecC
Confidence 45789999999999998 889999998 5559999998776553 333 477889999999987 4789999
Q ss_pred CCCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEEecCeEEEEEcCCceeeeEeeccCCCceeEEEe-eCC
Q 015650 149 PDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVS-QGV 226 (403)
Q Consensus 149 ~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~ 226 (403)
.| ++|++||+.+++...... +........+.. +............+...+..+.+. +++
T Consensus 207 ~d-----~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~--------------~~~~~~~~~~~~~~~~~v~~v~~~~~dg 267 (393)
T 4gq1_A 207 RN-----GNIRIFDWTLNLSAEENSQTELVKNPWLLTL--------------NTLPLVNTCHSSGIASSLANVRWIGSDG 267 (393)
T ss_dssp TT-----SEEEEEETTCCC----------CSCCCSEEE--------------ESGGGC------CCSSSCSEEEEETTTT
T ss_pred CC-----CEEEEEECCCCcccccccccCCcccceEEec--------------ccccceeeeecccccccceeeeeecCCC
Confidence 98 999999999987766554 222111111110 111111111223566777888887 565
Q ss_pred CeEEEEeeCCccCeEEEEEccCCce-eEEeecCCceEE------------------EEEcC--CCCEEEEEeCCCcEEEE
Q 015650 227 GSLVLVCPGLQKGQVRVEHYASKRT-KFIMAHDSRIAC------------------FALTQ--DGQLLATSSTKGTLVRI 285 (403)
Q Consensus 227 ~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~~~~~~i~~------------------~~~sp--~g~~l~s~~~dg~~i~i 285 (403)
.. +++ ++.|+.+++||+...+. ..+..|...+.. ..|+| ++.++++|+.||. |+|
T Consensus 268 ~~--l~s-~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~-V~l 343 (393)
T 4gq1_A 268 SG--ILA-MCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGL-IQL 343 (393)
T ss_dssp CE--EEE-ECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTE-EEE
T ss_pred CE--EEE-EeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCE-EEE
Confidence 53 333 35899999999876432 223333332222 23333 3446778889999 999
Q ss_pred EEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeec
Q 015650 286 FNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 286 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~ 334 (403)
||+.+++++..+.. |...|++++|+|||++||+++++| +.+|++..
T Consensus 344 wd~~~~~~~~~~~~--~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 344 INTYEKDSNSIPIQ--LGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp EETTCTTCCEEEEE--CSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred EECCCCcEEEEecC--CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 99999988877765 567999999999999999998766 77777654
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=1.1e-23 Score=183.75 Aligned_cols=248 Identities=9% Similarity=-0.007 Sum_probs=186.1
Q ss_pred CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCC-CceeEEEe-c-CCceeEE
Q 015650 105 DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ-SRCIGELS-F-RSEVRSV 181 (403)
Q Consensus 105 ~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~-~~~~~~~~-~-~~~i~~~ 181 (403)
++.|++|++.+++.. ... .+...+.++.|++++..++.+. + +.|++||+.+ ++...... + ...+.++
T Consensus 21 ~~~i~~~d~~~~~~~--~~~--~~~~~v~~~~~spdg~~l~~~~-~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMR--VVW--QTPELFEAPNWSPDGKYLLLNS-E-----GLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp CEEEEEEETTTTEEE--EEE--EESSCCEEEEECTTSSEEEEEE-T-----TEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred ceeEEEEeCCCCcee--eec--cCCcceEeeEECCCCCEEEEEc-C-----CeEEEEeCCCCCCceEeccccccccccce
Confidence 344999999887654 223 3677899999999998888776 4 8999999999 87766665 3 4678999
Q ss_pred EEecCceEEE--e-----cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEcc--CCcee
Q 015650 182 KLRRDRIIVV--L-----EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA--SKRTK 252 (403)
Q Consensus 182 ~~~~~~~~~~--~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~--~~~~~ 252 (403)
+|+|++.+++ . ...|+.|++.+++ ...+..+ ..+..++|+|+++.++++. ..++.+++|+++ ++...
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~--~~~~~~~l~~~~~~~~~~~ 166 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCG--IRDQVFDIYSMDIDSGVET 166 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEE--EETTEEEEEEEETTTCCEE
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEE--CCCCceEEEEEECCCCcce
Confidence 9999998887 2 1355555655554 3344333 3467789999988665443 467888999854 46667
Q ss_pred EEeecCCceEEEEEcCCCCEEEEEe-CCCcEEEEEEcC-CCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCC------
Q 015650 253 FIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTL-DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK------ 324 (403)
Q Consensus 253 ~~~~~~~~i~~~~~sp~g~~l~s~~-~dg~~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~d------ 324 (403)
.+..+...+.+++|+|+|++|+.++ .++. ++||++. .+..+..+.. +...+..++|+|+|++|++++.+
T Consensus 167 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 167 RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQ-MQIWRVRVDGSSVERITD--SAYGDWFPHPSPSGDKVVFVSYDADVFDH 243 (297)
T ss_dssp ECCCSSSCEEEEEECTTSSEEEEEECTTSS-CEEEEEETTSSCEEECCC--CSEEEEEEEECTTSSEEEEEEEETTCCSC
T ss_pred EcccCCCccccceECCCCCEEEEEecCCCC-ccEEEECCCCCCcEEEec--CCcccCCeEECCCCCEEEEEEcCCCCCcc
Confidence 7777888999999999999888766 4888 9999886 4555666654 55789999999999999988765
Q ss_pred -----CcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEc
Q 015650 325 -----GTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILG 399 (403)
Q Consensus 325 -----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~ 399 (403)
+.|++||+++++. ..+..+..+...+..++|+|||++|++++
T Consensus 244 ~~~~~~~l~~~d~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGGNV---------------------------------ETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp CSSEEEEEEEEETTSCSC---------------------------------EEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred cccCceEEEEEecCCCCc---------------------------------eeeeccCCCCcccccceECCCCCEEEEEE
Confidence 5699999987762 01223445677889999999999999888
Q ss_pred cCC
Q 015650 400 MDG 402 (403)
Q Consensus 400 ~dG 402 (403)
.|.
T Consensus 291 ~~~ 293 (297)
T 2ojh_A 291 YFP 293 (297)
T ss_dssp ECC
T ss_pred ecc
Confidence 763
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=2.6e-22 Score=178.42 Aligned_cols=229 Identities=14% Similarity=0.128 Sum_probs=166.4
Q ss_pred EEcCCCCE-EEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEE-EeeCCCCCCCCCceEEEEECCCCce
Q 015650 92 SFNQDHGC-FAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILA-LVGGGPDPQYPLNKVMIWDDHQSRC 168 (403)
Q Consensus 92 ~~s~d~~~-l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~s~~~d~~~~~~~i~iwd~~~~~~ 168 (403)
.|.+++.+ ++++. ++.|++||..+++....... +.... .+.|++++.. +++...+ +.|.+||+.+++.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~-~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL---GYDFV-DTAITSDCSNVVVTSDFC-----QTLVQIETQLEPP 74 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC---CCCEE-EEEECSSSCEEEEEESTT-----CEEEEEECSSSSC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc---cCCcc-eEEEcCCCCEEEEEeCCC-----CeEEEEECCCCce
Confidence 46666655 45555 45599999988876543332 34445 8999998864 4444445 8999999999987
Q ss_pred -eEEEec-CCceeEEEEecCceEEE--e-c-C--eEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCe
Q 015650 169 -IGELSF-RSEVRSVKLRRDRIIVV--L-E-Q--KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQ 240 (403)
Q Consensus 169 -~~~~~~-~~~i~~~~~~~~~~~~~--~-d-~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~ 240 (403)
...+.. ..+..+++|+|++.+++ . + + .|++||+.+++.+..+... .....++|+|+++.++++. ..++.
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~--~~~~~ 151 (331)
T 3u4y_A 75 KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILID--RSSAN 151 (331)
T ss_dssp EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEE--ETTTT
T ss_pred eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEe--cCCCc
Confidence 667764 44444499999998777 2 3 3 8999999999888877654 3457899999998766554 34567
Q ss_pred -EEEEEccCCc-e----eEEeecCCceEEEEEcCCCCEEEEEe-CCCcEEEEEEcCCCcE---EEEEecCCCcccEEEEE
Q 015650 241 -VRVEHYASKR-T----KFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTL---LQEVRRGADRAEIYSLA 310 (403)
Q Consensus 241 -i~v~d~~~~~-~----~~~~~~~~~i~~~~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~---~~~~~~~~~~~~v~~l~ 310 (403)
|.+|++.... + ............++|+|+|++|+.++ .++. |++||+.+++. +..+.. ...+..++
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~~~~~~~~~~~---~~~~~~~~ 227 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS-IGILETQNPENITLLNAVGT---NNLPGTIV 227 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE-EEEEECSSTTSCEEEEEEEC---SSCCCCEE
T ss_pred eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe-EEEEECCCCcccceeeeccC---CCCCceEE
Confidence 9999987522 2 12223455689999999999766555 5777 99999999988 777773 36678999
Q ss_pred eCCCCCEEEEEe-CCCcEEEEEeecCC
Q 015650 311 FSSNAQWLAVSS-DKGTVHVFNLKVNS 336 (403)
Q Consensus 311 ~s~d~~~l~s~~-~dg~v~iwd~~~~~ 336 (403)
|+|||++|+++. .++.|.+||+.+++
T Consensus 228 ~spdg~~l~v~~~~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 228 VSRDGSTVYVLTESTVDVFNFNQLSGT 254 (331)
T ss_dssp ECTTSSEEEEECSSEEEEEEEETTTTE
T ss_pred ECCCCCEEEEEEcCCCEEEEEECCCCc
Confidence 999999876665 57889999998876
No 135
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=1.4e-23 Score=201.27 Aligned_cols=231 Identities=9% Similarity=0.014 Sum_probs=168.4
Q ss_pred CCCeEEEEEcCCCCEEEEEc--CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCC---CCCCCCceEE
Q 015650 85 PPTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP---DPQYPLNKVM 159 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~--~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~---d~~~~~~~i~ 159 (403)
...|.+++|+|||+.||+++ ++.++||++++++. ..+..++...+..+.|+|+ ..+++++. + ....
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~---~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~-----~~~~ 91 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET---VKLNREPINSVLDPHYGVG-RVILVRDVSKGA-----EQHA 91 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE---EECCSSCCSEECEECTTCS-EEEEEEECSTTS-----CCEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc---EeeecccccccccccCCCC-eEEEEeccCCCC-----cceE
Confidence 44699999999999999876 45599999866543 3343233368899999999 55554432 2 4455
Q ss_pred EEECCC---CceeEEEecCCceeEEEEecCce--EEE--ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEE
Q 015650 160 IWDDHQ---SRCIGELSFRSEVRSVKLRRDRI--IVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (403)
Q Consensus 160 iwd~~~---~~~~~~~~~~~~i~~~~~~~~~~--~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (403)
+|.+.. +... .+.....+...+|+|++. +++ .++.+.+||+.+++......... ..++++|+++.++.+
T Consensus 92 l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~ 167 (582)
T 3o4h_A 92 LFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGL 167 (582)
T ss_dssp EEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEE
T ss_pred EEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEE
Confidence 554432 3322 444333455668888774 344 35566799999887655544322 788999999976544
Q ss_pred eeC-CccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCC--cEEEEEEcCCCcEEEEEecCCCcccEEEE
Q 015650 233 CPG-LQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG--TLVRIFNTLDGTLLQEVRRGADRAEIYSL 309 (403)
Q Consensus 233 ~~g-~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg--~~i~iwd~~~~~~~~~~~~~~~~~~v~~l 309 (403)
... ...+.|++||+.++....+..|...+..++|+|||++|+++..++ . |++||+.+++.. .+.. +...+..+
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~-i~~~d~~~~~~~-~~~~--~~~~~~~~ 243 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREAR-LVTVDPRDGSVE-DLEL--PSKDFSSY 243 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEE-EEEECTTTCCEE-ECCC--SCSHHHHH
T ss_pred EEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeE-EEEEcCCCCcEE-EccC--CCcChhhh
Confidence 311 112679999999988888888999999999999999999888888 7 999999998887 5543 44556666
Q ss_pred E--------eCCCCCEEEEEeCCCcEEEEEe
Q 015650 310 A--------FSSNAQWLAVSSDKGTVHVFNL 332 (403)
Q Consensus 310 ~--------~s~d~~~l~s~~~dg~v~iwd~ 332 (403)
+ |+|||.++++++.|+.+++|++
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 6 9999998999999999999999
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=3.1e-22 Score=178.58 Aligned_cols=240 Identities=10% Similarity=0.068 Sum_probs=170.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC--CcEEEEEcC--CCeeEEEEecccCcceeEEEEeeeCCeEEEe-eCCCCCCCCCce
Q 015650 83 SPPPTLLHISFNQDHGCFAAGTD--HGFRIYNCD--PFREIFRRDFERGGGIGVVEMLFRCNILALV-GGGPDPQYPLNK 157 (403)
Q Consensus 83 ~~~~~i~~i~~s~d~~~l~~~~~--~~i~iw~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-s~~~d~~~~~~~ 157 (403)
.|...+.+++|+|+|++|++++. +.|++|+++ +++......+. .+ ..+..+.|++++..++ ++..+ +.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~~~~~~-----~~ 107 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-LP-GSLTHISTDHQGQFVFVGSYNA-----GN 107 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-CS-SCCSEEEECTTSSEEEEEETTT-----TE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc-cC-CCCcEEEEcCCCCEEEEEecCC-----Ce
Confidence 35567888999999998888774 459999997 44444334444 22 2678889999887554 44445 89
Q ss_pred EEEEECC---CCceeEEEecCCceeEEEEecCceEEE----ecCeEEEEEcCC-ceeee----Eeec-cCCCceeEEEee
Q 015650 158 VMIWDDH---QSRCIGELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFAD-LKLLH----QIET-IANPKGLCAVSQ 224 (403)
Q Consensus 158 i~iwd~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~----~d~~i~i~d~~~-~~~~~----~~~~-~~~~~~~~~~~~ 224 (403)
|.+||+. ..+.+..+.....+.+++|+|++.+++ .++.|++||+.+ ++... .+.. .......++|+|
T Consensus 108 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 187 (343)
T 1ri6_A 108 VSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP 187 (343)
T ss_dssp EEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT
T ss_pred EEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECC
Confidence 9999994 444555555556789999999997665 378999999987 54432 2222 233556789999
Q ss_pred CCCeEEEEeeCCccCeEEEEEccC--Ccee---EEee---c---CCceEEEEEcCCCCEEEEEe-CCCcEEEEEEcC--C
Q 015650 225 GVGSLVLVCPGLQKGQVRVEHYAS--KRTK---FIMA---H---DSRIACFALTQDGQLLATSS-TKGTLVRIFNTL--D 290 (403)
Q Consensus 225 ~~~~~~~~~~g~~d~~i~v~d~~~--~~~~---~~~~---~---~~~i~~~~~sp~g~~l~s~~-~dg~~i~iwd~~--~ 290 (403)
+++.++++. ..++.|.+|+++. +... .+.. . ...+..++|+|+|++|+++. .++. |++||+. +
T Consensus 188 dg~~l~~~~--~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~-i~v~d~~~~~ 264 (343)
T 1ri6_A 188 NEQYAYCVN--ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL-ITVFSVSEDG 264 (343)
T ss_dssp TSSEEEEEE--TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTS
T ss_pred CCCEEEEEe--CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE-EEEEEEcCCC
Confidence 988655543 4689999999954 3332 2221 1 23567899999999887544 6788 9999998 2
Q ss_pred --CcEEEEEecCCCcccEEEEEeCCCCCEEEEEe-CCCcEEEEEeecC
Q 015650 291 --GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVN 335 (403)
Q Consensus 291 --~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~ 335 (403)
.+.+..+.. + ..+.+++|+|+|++|++++ .++.|.+|+++..
T Consensus 265 ~~~~~~~~~~~--~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~ 309 (343)
T 1ri6_A 265 SVLSKEGFQPT--E-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 309 (343)
T ss_dssp CCEEEEEEEEC--S-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred CceEEeeeecC--C-CccceEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 344445553 2 3488999999999988887 6899999988754
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=5.7e-23 Score=201.62 Aligned_cols=235 Identities=11% Similarity=0.104 Sum_probs=168.0
Q ss_pred eEEEEEcCCCCEEEEEcCCcEEEEEcCCCee--EEEEeccc-------------CcceeEEEEeeeCCeEEEeeCCCCCC
Q 015650 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFRE--IFRRDFER-------------GGGIGVVEMLFRCNILALVGGGPDPQ 152 (403)
Q Consensus 88 i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~--~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~s~~~d~~ 152 (403)
+..+.|. |..++++.+++| +||+.+++. ........ .+...+.++.|++++.++++.+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~~~---- 100 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLFTQ---- 100 (706)
T ss_dssp CTTCEEE--TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEEET----
T ss_pred CCCCcCc--CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEEEC----
Confidence 4446787 556666665669 999988765 32221110 0014688999999966666643
Q ss_pred CCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE--ecCeEEEEEcCC-----ceeeeEeeccCCC---------
Q 015650 153 YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFAD-----LKLLHQIETIANP--------- 216 (403)
Q Consensus 153 ~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~d~~i~i~d~~~-----~~~~~~~~~~~~~--------- 216 (403)
+.|++||+.+++......+...+..++|+|||..++ .++.|++||+.+ ++...........
T Consensus 101 ---~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 101 ---GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp ---TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred ---CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence 899999999887766655778899999999998877 689999999988 7665544333322
Q ss_pred -----ceeEEEeeCCCeEEEEee------------------------------CCccCeEEEEEccCCceeEEe---ecC
Q 015650 217 -----KGLCAVSQGVGSLVLVCP------------------------------GLQKGQVRVEHYASKRTKFIM---AHD 258 (403)
Q Consensus 217 -----~~~~~~~~~~~~~~~~~~------------------------------g~~d~~i~v~d~~~~~~~~~~---~~~ 258 (403)
+..+.|+|+++.++++.. ...+..|++||+.++....+. .|.
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 257 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE 257 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc
Confidence 478999999987665531 113468999999987765543 466
Q ss_pred CceEEEEEcCCCCEEEEEeCCC-----cEEEEEEcCCCcEEEEEecCCCcc---cEEEEEeCC--CCCEEEEEeCCCcEE
Q 015650 259 SRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGTLLQEVRRGADRA---EIYSLAFSS--NAQWLAVSSDKGTVH 328 (403)
Q Consensus 259 ~~i~~~~~sp~g~~l~s~~~dg-----~~i~iwd~~~~~~~~~~~~~~~~~---~v~~l~~s~--d~~~l~s~~~dg~v~ 328 (403)
..+.+++|+|||++|++++.++ . |++||+.+++....+....+.. .+.+++|+| ||++|+++..||.++
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~-v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~ 336 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECK-VNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNH 336 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEE-EEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCE
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeE-EEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccE
Confidence 7899999999999999887765 6 9999999984444443211222 246789999 999999999999999
Q ss_pred EEEee
Q 015650 329 VFNLK 333 (403)
Q Consensus 329 iwd~~ 333 (403)
||+++
T Consensus 337 l~~~~ 341 (706)
T 2z3z_A 337 LYLYD 341 (706)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99998
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=2.1e-22 Score=179.22 Aligned_cols=252 Identities=11% Similarity=0.032 Sum_probs=182.4
Q ss_pred CEEEEEc-CCcEEEEEcCCCeeEEEEecccCcce-eEEEEeeeCCe-EEEeeCCCCCCCCCceEEEEECCCCceeEEEec
Q 015650 98 GCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGI-GVVEMLFRCNI-LALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (403)
Q Consensus 98 ~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~-~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~ 174 (403)
++|+++. ++.|++||+.+++......+. +.. .+..+.|++++ .++++...+ +.|.+||+.+++.+..+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIA--DAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECT--TCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcC--CCCCCccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeEeeEEc
Confidence 3566666 556999999887765333332 211 36678899987 455666666 8999999999998887774
Q ss_pred CC------ceeEEEEecCceEEE-e--------------cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEe
Q 015650 175 RS------EVRSVKLRRDRIIVV-L--------------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (403)
Q Consensus 175 ~~------~i~~~~~~~~~~~~~-~--------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (403)
.. .+..++|+|++.+++ . ++.|++||+.+++.+..+.. ...+..++++|+++.++++
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL- 152 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE-
T ss_pred CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe-
Confidence 33 688999999997665 3 38999999999888877765 3456778899999876554
Q ss_pred eCCccCeEEEEEccCCceeE-EeecCCceEEEEEcCCCCEEEEEeCCCc-----------------------EEEEEEcC
Q 015650 234 PGLQKGQVRVEHYASKRTKF-IMAHDSRIACFALTQDGQLLATSSTKGT-----------------------LVRIFNTL 289 (403)
Q Consensus 234 ~g~~d~~i~v~d~~~~~~~~-~~~~~~~i~~~~~sp~g~~l~s~~~dg~-----------------------~i~iwd~~ 289 (403)
++.|.+||+.+++... +..+. ....+.|+|+|++|+..+..+. .|.+||+.
T Consensus 153 ----~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 227 (337)
T 1pby_B 153 ----GRDLHVMDPEAGTLVEDKPIQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp ----SSSEEEEETTTTEEEEEECSTT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred ----CCeEEEEECCCCcEeeeeeccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC
Confidence 4789999998876543 33222 1123378999987765554332 16899999
Q ss_pred CCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeee
Q 015650 290 DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSS 369 (403)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (403)
+++.. .+....+...+.+++|+|||++|+++ ++.|++||+.+++.
T Consensus 228 ~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~-------------------------------- 272 (337)
T 1pby_B 228 TGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS-------------------------------- 272 (337)
T ss_dssp TCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE--------------------------------
T ss_pred CCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC--------------------------------
Confidence 98875 33332355678899999999999988 78999999987762
Q ss_pred eeeeEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 370 EWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
...+. ....+..++|+|||++|++++.||
T Consensus 273 ---~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 301 (337)
T 1pby_B 273 ---IKRVP-LPHSYYSVNVSTDGSTVWLGGALG 301 (337)
T ss_dssp ---EEEEE-CSSCCCEEEECTTSCEEEEESBSS
T ss_pred ---cceec-CCCceeeEEECCCCCEEEEEcCCC
Confidence 11122 234678899999999999988775
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=1e-23 Score=207.41 Aligned_cols=239 Identities=9% Similarity=0.009 Sum_probs=171.1
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcce---eEEEEeeeCCeEEEeeCCCCCCC----CCceEE
Q 015650 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI---GVVEMLFRCNILALVGGGPDPQY----PLNKVM 159 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~s~~~d~~~----~~~~i~ 159 (403)
.+.+++|+|||++++++.++.|++||+.+++.. ..+. ++.. .+..+.|+||+..++.+..+... ..+.|+
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~--~~~~-~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTST--VLIE-GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCE--EEEC-TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEE--EEec-cccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 466789999999887755667999999887765 3343 3333 48899999999887776543110 126899
Q ss_pred EEECCCCceeEEEe----cCCceeEEEEecCceEEE--ecCeEEEEEcCCceeeeEeeccCCCc----------------
Q 015650 160 IWDDHQSRCIGELS----FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPK---------------- 217 (403)
Q Consensus 160 iwd~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~---------------- 217 (403)
+||+.+++. ..+. +...+..++|+|||+.++ .++.|++||+.+++..+....+...+
T Consensus 95 ~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 999999876 3333 333488999999998777 58899999999887766554433333
Q ss_pred --eeEEEeeCCCeEEEEeeCC-------------------------------ccCeEEEEEccCCce-eEEeec------
Q 015650 218 --GLCAVSQGVGSLVLVCPGL-------------------------------QKGQVRVEHYASKRT-KFIMAH------ 257 (403)
Q Consensus 218 --~~~~~~~~~~~~~~~~~g~-------------------------------~d~~i~v~d~~~~~~-~~~~~~------ 257 (403)
..++|+|+++.++++.... .+..|++||+.++.. ..+..+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 6799999998766654110 022799999988763 555543
Q ss_pred CCceEEEEEcCCCCEEEEEeCC----CcEEEEEEcCCCcEEEEEecCCCcccE----EEEEeCCCCCEEEE--EeCCC--
Q 015650 258 DSRIACFALTQDGQLLATSSTK----GTLVRIFNTLDGTLLQEVRRGADRAEI----YSLAFSSNAQWLAV--SSDKG-- 325 (403)
Q Consensus 258 ~~~i~~~~~sp~g~~l~s~~~d----g~~i~iwd~~~~~~~~~~~~~~~~~~v----~~l~~s~d~~~l~s--~~~dg-- 325 (403)
...+..++|+|||++|++.+.. .. |++||+.++++...+..+ +...+ ..++|+|||+.|+. ...++
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSI-LTLCDATTGVCTKKHEDE-SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEE-EEEEETTTCCEEEEEEEE-CSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEE-EEEEeCCCCcceEEEEec-cCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 5678999999999998776543 45 999999999887666532 23333 37899999997775 44667
Q ss_pred ----cEEEEE
Q 015650 326 ----TVHVFN 331 (403)
Q Consensus 326 ----~v~iwd 331 (403)
.|++||
T Consensus 332 ~~~~~l~~~d 341 (723)
T 1xfd_A 332 GKFYHITVSS 341 (723)
T ss_dssp SCEEEEEEEC
T ss_pred cceeEEEEEe
Confidence 455555
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=1.1e-22 Score=200.68 Aligned_cols=265 Identities=10% Similarity=0.036 Sum_probs=192.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEcCCCe--eEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC
Q 015650 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFR--EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~ 164 (403)
.|.+++|+|||++|++++++.|++|++.++. .. ..+. .+...+..+.|+|++..++.+.. +.|++||+.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~--~~l~-~~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~ 180 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAV--RQLT-HGEGFATDAKLSPKGGFVSFIRG------RNLWVIDLA 180 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSC--CBCC-CSSSCEEEEEECTTSSEEEEEET------TEEEEEETT
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceE--EEcc-cCCcccccccCCCCCCEEEEEeC------CcEEEEecC
Confidence 4788999999999999988779999998762 22 3343 46677999999999988877764 689999999
Q ss_pred CCceeEEEe-cCCc----------------eeEEEEecCceEEE---ecC------------------------------
Q 015650 165 QSRCIGELS-FRSE----------------VRSVKLRRDRIIVV---LEQ------------------------------ 194 (403)
Q Consensus 165 ~~~~~~~~~-~~~~----------------i~~~~~~~~~~~~~---~d~------------------------------ 194 (403)
+++...... +... +..+.|+|||+.++ .|+
T Consensus 181 ~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 181 SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 887665444 2221 47899999998777 344
Q ss_pred ---eEEEEEcCC-ceeeeEee--ccCCCceeEEEeeCCCeEEEEee--CCccCeEEEEEccCCceeEEe-ecCC----ce
Q 015650 195 ---KIFVYNFAD-LKLLHQIE--TIANPKGLCAVSQGVGSLVLVCP--GLQKGQVRVEHYASKRTKFIM-AHDS----RI 261 (403)
Q Consensus 195 ---~i~i~d~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--g~~d~~i~v~d~~~~~~~~~~-~~~~----~i 261 (403)
.|++||+.+ ++...... .+...+..++| |+++.+++... +..+..|++||+.++....+. .+.. .+
T Consensus 261 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 339 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLH 339 (741)
T ss_dssp CEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcC
Confidence 789999988 77554332 24556778999 99997766642 234678999999987665543 3332 45
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEEcC-CCcEEEEEecCCCcccEEEE-EeCCCCCEEEEE-eCCC--cEEEEEeecCC
Q 015650 262 ACFALTQDGQLLATSSTKGTLVRIFNTL-DGTLLQEVRRGADRAEIYSL-AFSSNAQWLAVS-SDKG--TVHVFNLKVNS 336 (403)
Q Consensus 262 ~~~~~sp~g~~l~s~~~dg~~i~iwd~~-~~~~~~~~~~~~~~~~v~~l-~~s~d~~~l~s~-~~dg--~v~iwd~~~~~ 336 (403)
..++|+|||+++++++.++. ++||.+. +++ ...+.. +...|..+ .|+|||+.|+.. +.++ .++||+++...
T Consensus 340 ~~~~~spdg~~~~~~~~~g~-~~l~~~~~~~~-~~~l~~--~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g 415 (741)
T 2ecf_A 340 NSLRFLDDGSILWSSERTGF-QHLYRIDSKGK-AAALTH--GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG 415 (741)
T ss_dssp SCCEECTTSCEEEEECTTSS-CEEEEECSSSC-EEESCC--SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC
T ss_pred CceEECCCCeEEEEecCCCc-cEEEEEcCCCC-eeeeee--cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC
Confidence 68999999999999999997 7888765 455 666654 45678887 599999987654 4555 89999998633
Q ss_pred CCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEcc
Q 015650 337 GSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGM 400 (403)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~ 400 (403)
.. ..++.. .+.+..++|||||++|+....
T Consensus 416 ~~----------------------------------~~~l~~-~~~~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 416 GQ----------------------------------PQRLSK-APGMHSASFARNASVYVDSWS 444 (741)
T ss_dssp CC----------------------------------CEECCC-SCSEEEEEECTTSSEEEEEEE
T ss_pred CC----------------------------------eeeccc-CCCceEEEECCCCCEEEEEec
Confidence 10 011111 335667899999999887654
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=2.8e-21 Score=172.33 Aligned_cols=258 Identities=10% Similarity=0.114 Sum_probs=173.8
Q ss_pred EEEEc-CCcEEEEEcCC-CeeEEEEecccCcceeEEEEeeeCCeEEEeeCC-CCCCCCCceEEEEECC--CCc--eeEEE
Q 015650 100 FAAGT-DHGFRIYNCDP-FREIFRRDFERGGGIGVVEMLFRCNILALVGGG-PDPQYPLNKVMIWDDH--QSR--CIGEL 172 (403)
Q Consensus 100 l~~~~-~~~i~iw~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~~~~~~i~iwd~~--~~~--~~~~~ 172 (403)
++++. ++.|++|+++. +.......+. +...+..++|++++..++.++ .+ +.|.+|++. +++ .+..+
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKRYLYVGVRPE-----FRVLAYRIAPDDGALTFAAES 80 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEEE
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCCEEEEeecCC-----CeEEEEEecCCCCceeecccc
Confidence 34434 66699999963 3323333443 556677899999886554443 34 799999987 554 33445
Q ss_pred ecCCceeEEEEecCceEEE----ecCeEEEEEcC---CceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEE
Q 015650 173 SFRSEVRSVKLRRDRIIVV----LEQKIFVYNFA---DLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEH 245 (403)
Q Consensus 173 ~~~~~i~~~~~~~~~~~~~----~d~~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d 245 (403)
.....+..++|+|++.+++ .++.|++||+. ..+.+..+.. ...+..++|+++++.++++. ..++.|.+||
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~--~~~~~v~~~d 157 (343)
T 1ri6_A 81 ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPA--LKQDRICLFT 157 (343)
T ss_dssp ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEE--GGGTEEEEEE
T ss_pred ccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEec--CCCCEEEEEE
Confidence 5445889999999998665 27889999994 4444555543 33567899999988665543 3679999999
Q ss_pred ccC-CceeE-----Eee-cCCceEEEEEcCCCCEEEEEe-CCCcEEEEEEcCC--CcE--EEEEecC----CCcccEEEE
Q 015650 246 YAS-KRTKF-----IMA-HDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLD--GTL--LQEVRRG----ADRAEIYSL 309 (403)
Q Consensus 246 ~~~-~~~~~-----~~~-~~~~i~~~~~sp~g~~l~s~~-~dg~~i~iwd~~~--~~~--~~~~~~~----~~~~~v~~l 309 (403)
+.. +.... +.. ....+.+++|+|+|++|++++ .++. |++||+.. ++. ...+... .....+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~-i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS-VDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 987 55432 222 345788999999999776555 6788 99999953 433 2333211 112357789
Q ss_pred EeCCCCCEEEEE-eCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEe
Q 015650 310 AFSSNAQWLAVS-SDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAF 388 (403)
Q Consensus 310 ~~s~d~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 388 (403)
+|+|+|++|+++ ..++.|++||++..... ...+..+..+ +.+..++|
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~-------------------------------~~~~~~~~~~-~~~~~~~~ 284 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSV-------------------------------LSKEGFQPTE-TQPRGFNV 284 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCC-------------------------------EEEEEEEECS-SSCCCEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCc-------------------------------eEEeeeecCC-CccceEEE
Confidence 999999988754 47999999999843210 0011222222 34788999
Q ss_pred ccCCCEEEEEcc
Q 015650 389 GHQKNTVVILGM 400 (403)
Q Consensus 389 s~d~~~l~~~~~ 400 (403)
+|||++|++++.
T Consensus 285 s~dg~~l~~~~~ 296 (343)
T 1ri6_A 285 DHSGKYLIAAGQ 296 (343)
T ss_dssp CTTSSEEEEECT
T ss_pred CCCCCEEEEecC
Confidence 999999998884
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=7.2e-22 Score=175.58 Aligned_cols=242 Identities=10% Similarity=0.065 Sum_probs=171.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEc--CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc---eE
Q 015650 84 PPPTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN---KV 158 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~--~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~---~i 158 (403)
+...+ +++|+|+|++|++++ ++.|.+||..+++.. ...+. .+......+.|++++..+++...+ + .|
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~-~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~-----~~~~~i 110 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK-VVAIQ-EGQSSMADVDITPDDQFAVTVTGL-----NHPFNM 110 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-EEEEE-ECSSCCCCEEECTTSSEEEECCCS-----SSSCEE
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-EEecc-cCCCCccceEECCCCCEEEEecCC-----CCcccE
Confidence 34556 999999999766655 445999999877652 13343 233333338899998777754443 3 89
Q ss_pred EEEECCCCceeEEEecCCceeEEEEecCceEEE-e---cCe-EEEEEcCCceeee----EeeccCCCceeEEEeeCCCeE
Q 015650 159 MIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-L---EQK-IFVYNFADLKLLH----QIETIANPKGLCAVSQGVGSL 229 (403)
Q Consensus 159 ~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~---d~~-i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 229 (403)
.+||+.+++.+..+.......+++|+|++++++ . ++. |.+|++.....+. ...........++++|+++.+
T Consensus 111 ~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 111 QSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFA 190 (331)
T ss_dssp EEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEE
T ss_pred EEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEE
Confidence 999999999988888767789999999997544 2 467 9999987633321 111223446788999998876
Q ss_pred EEEeeCCccCeEEEEEccCCce---eEEeecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcE--EEEEecC--C
Q 015650 230 VLVCPGLQKGQVRVEHYASKRT---KFIMAHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTL--LQEVRRG--A 301 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~~---~~~~~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~--~~~~~~~--~ 301 (403)
+++. ..++.|.+||+.+++. .........+..++|+|||++|+.++. ++. |.+||+.+++. +..+... .
T Consensus 191 ~v~~--~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~~ 267 (331)
T 3u4y_A 191 FVAN--LIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVD-VFNFNQLSGTLSFVKSFGHGLLI 267 (331)
T ss_dssp EEEE--TTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEE-EEEEETTTTEEEEEEEEECCCCC
T ss_pred EEEe--CCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCE-EEEEECCCCceeeeccccccccc
Confidence 6654 4678999999988664 333334567789999999998776654 666 99999999877 4444422 1
Q ss_pred Ccc---cEEEEEeCCCCCEEEEEe-CCCcEEEEEeecCC
Q 015650 302 DRA---EIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVNS 336 (403)
Q Consensus 302 ~~~---~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~~ 336 (403)
+.. ....++|+|||++|++++ .++.|++||+....
T Consensus 268 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 268 DPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp CCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 112 235689999999886665 56799999998755
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=1e-22 Score=207.80 Aligned_cols=267 Identities=9% Similarity=0.085 Sum_probs=197.7
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 81 SSSPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
+.+|...+.++.|+++ .+++++.. +.++||.++...... ..+. .+. .+....|++++..++.+. + +.|+
T Consensus 199 l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~-~~l~-~~~-~~~~~~~SpDG~~la~~~-~-----~~i~ 268 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL-RKHT-SFT-DYYPRHLNTDGRRILFSK-G-----GSIY 268 (1045)
T ss_dssp EECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC-EECC-CCC-SSCEEEEEESSSCEEEEE-T-----TEEE
T ss_pred CcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc-eEec-CCC-CcceeeEcCCCCEEEEEe-C-----CEEE
Confidence 4789999999999998 55566654 448899875422211 3343 222 344557888887666653 4 8999
Q ss_pred EEECCCCceeEEEec------------CCceeEEEEe-cCceEEE--ecCeEEEEEcCCceeeeEeeccCC-CceeEEEe
Q 015650 160 IWDDHQSRCIGELSF------------RSEVRSVKLR-RDRIIVV--LEQKIFVYNFADLKLLHQIETIAN-PKGLCAVS 223 (403)
Q Consensus 160 iwd~~~~~~~~~~~~------------~~~i~~~~~~-~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~ 223 (403)
+|++...+ +..+.. ...+..++|+ |||..++ .++.|++|++.+++... +..+.. .+..++|+
T Consensus 269 ~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s 346 (1045)
T 1k32_A 269 IFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD 346 (1045)
T ss_dssp EECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEE-CSCCSCEEEEEECSS
T ss_pred EecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEE-ccCCCcceEEeeeEc
Confidence 99984443 333332 2368999999 9998776 68999999998776443 444555 66778888
Q ss_pred eCCCeEEEEeeCCccCeEE-EEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCC
Q 015650 224 QGVGSLVLVCPGLQKGQVR-VEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGAD 302 (403)
Q Consensus 224 ~~~~~~~~~~~g~~d~~i~-v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~ 302 (403)
+++.++++. .+..+. +||+.++....+..|...+..++|+|||++|++++.++. |++||+.+++....+.. |
T Consensus 347 -dg~~l~~~s---~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~-v~~~d~~tg~~~~~~~~--~ 419 (1045)
T 1k32_A 347 -TKVAFIHGT---REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFE-IMTVDLETGKPTVIERS--R 419 (1045)
T ss_dssp -SEEEEEEEE---TTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--S
T ss_pred -CCCeEEEEE---CCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCe-EEEEECCCCceEEeccC--C
Confidence 766554443 367888 899988877777778889999999999999999999999 99999999998777754 6
Q ss_pred cccEEEEEeCCCCCEEEEEeCCC----------cEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeee
Q 015650 303 RAEIYSLAFSSNAQWLAVSSDKG----------TVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWS 372 (403)
Q Consensus 303 ~~~v~~l~~s~d~~~l~s~~~dg----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (403)
...+.+++|+|||++|++++.++ .|++||+.+++.
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~----------------------------------- 464 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI----------------------------------- 464 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE-----------------------------------
T ss_pred CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE-----------------------------------
Confidence 67889999999999999887654 899999987651
Q ss_pred eEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 373 VAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 373 ~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
..+..+...+..++|+|||++|++++.++
T Consensus 465 -~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 465 -FAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp -EECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred -EEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 11222334456689999999999988754
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=1.9e-22 Score=197.93 Aligned_cols=266 Identities=10% Similarity=0.029 Sum_probs=188.1
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~ 164 (403)
...|.+++|+|| +.++.+.++.|++||+.+++.. ... .+...+..+.|+|++..++.. .+ +.|++|++.
T Consensus 81 ~~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~--~l~--~~~~~~~~~~~SpdG~~la~~-~~-----~~i~v~~~~ 149 (706)
T 2z3z_A 81 AFPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVT--YLF--DTNEETASLDFSPVGDRVAYV-RN-----HNLYIARGG 149 (706)
T ss_dssp -CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEE--EEE--CCTTCCTTCEECTTSSEEEEE-ET-----TEEEEEECB
T ss_pred ccCceeEEECCC-CeEEEEECCEEEEEECCCCceE--Ecc--CCcccccCCcCCCCCCEEEEE-EC-----CeEEEEecC
Confidence 357999999999 7777777778999999877543 222 244567778999999877775 45 899999999
Q ss_pred C-----CceeEEEe-cCCc--------------eeEEEEecCceEEE-e--c----------------------------
Q 015650 165 Q-----SRCIGELS-FRSE--------------VRSVKLRRDRIIVV-L--E---------------------------- 193 (403)
Q Consensus 165 ~-----~~~~~~~~-~~~~--------------i~~~~~~~~~~~~~-~--d---------------------------- 193 (403)
+ ++...... +... +.++.|+|||++++ . |
T Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g 229 (706)
T 2z3z_A 150 KLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAG 229 (706)
T ss_dssp CTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTT
T ss_pred cccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCC
Confidence 8 77665444 2222 48999999999887 2 2
Q ss_pred -----CeEEEEEcCCceeeeEee--ccCCCceeEEEeeCCCeEEEEeeC--CccCeEEEEEccCC-ceeEEe--ecCC--
Q 015650 194 -----QKIFVYNFADLKLLHQIE--TIANPKGLCAVSQGVGSLVLVCPG--LQKGQVRVEHYASK-RTKFIM--AHDS-- 259 (403)
Q Consensus 194 -----~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g--~~d~~i~v~d~~~~-~~~~~~--~~~~-- 259 (403)
..|++||+.+++...... .+...+..++|+|+++.++++... .....|++||..++ ....+. .+..
T Consensus 230 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 230 TPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp SCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 479999999887654432 344556789999999876655421 11248999999987 555443 2222
Q ss_pred -ceEEEEEcC--CCCEEEEEeCCCcEEEEEEcC-CCcEEEEEecCCCcccEEE-EEeCCCCCEEEEEeC-CC----cEEE
Q 015650 260 -RIACFALTQ--DGQLLATSSTKGTLVRIFNTL-DGTLLQEVRRGADRAEIYS-LAFSSNAQWLAVSSD-KG----TVHV 329 (403)
Q Consensus 260 -~i~~~~~sp--~g~~l~s~~~dg~~i~iwd~~-~~~~~~~~~~~~~~~~v~~-l~~s~d~~~l~s~~~-dg----~v~i 329 (403)
.+.+++|+| ||++|++++.++. ++||++. +++.+..+.. +...+.. ++|+|||+.|+.++. ++ .|+.
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~-~~l~~~~~~~~~~~~l~~--~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGW-NHLYLYDTTGRLIRQVTK--GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYC 386 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSS-CEEEEEETTSCEEEECCC--SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEE
T ss_pred CccCCceeecCCCCEEEEEEccCCc-cEEEEEECCCCEEEecCC--CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEE
Confidence 246789999 9999999999998 9999876 6777777764 4456776 799999998876654 44 4555
Q ss_pred EEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccC
Q 015650 330 FNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMD 401 (403)
Q Consensus 330 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~d 401 (403)
||+.+++. . .+. +...+..++|||||++|+.++.+
T Consensus 387 ~d~~~~~~-~-----------------------------------~l~-~~~~~~~~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 387 IDIKGGKT-K-----------------------------------DLT-PESGMHRTQLSPDGSAIIDIFQS 421 (706)
T ss_dssp EETTCCCC-E-----------------------------------ESC-CSSSEEEEEECTTSSEEEEEEEC
T ss_pred EEcCCCCc-e-----------------------------------ecc-CCCceEEEEECCCCCEEEEEecC
Confidence 55554431 0 011 23457779999999999877543
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=4.6e-22 Score=177.03 Aligned_cols=236 Identities=9% Similarity=0.008 Sum_probs=178.9
Q ss_pred CeEEEEEcCCCCEEEEE-cC-CcEEEEEcCCCeeEEEEecccC---cceeEEEEeeeCCeEEEeeCC------------C
Q 015650 87 TLLHISFNQDHGCFAAG-TD-HGFRIYNCDPFREIFRRDFERG---GGIGVVEMLFRCNILALVGGG------------P 149 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~-~~-~~i~iw~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~s~~------------~ 149 (403)
.+..++|+|+|++++++ .. +.|.+||+.+++......+. . +...+..+.|++++..++.+. .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS-TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC-BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC-CcccccccccceEECCCCCEEEEEeccccccccccccc
Confidence 36789999999876544 43 45999999887765333332 1 122456788999885555543 3
Q ss_pred CCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE-ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCe
Q 015650 150 DPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (403)
Q Consensus 150 d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (403)
+ +.|.+||+.+++.+..+.....+..++|+|++.+++ .++.|++||+.+++.+..+...... ..+.++|++..
T Consensus 114 ~-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~ 187 (337)
T 1pby_B 114 P-----TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLA 187 (337)
T ss_dssp C-----CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCC
T ss_pred C-----ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeCCeEEEEECCCCcEeeeeeccccC-CCceeCCCccE
Confidence 4 899999999998888887667788999999998655 7899999999999888777544311 23367888776
Q ss_pred EEEEeeCCccC-----------------------eEEEEEccCCceeE--EeecCCceEEEEEcCCCCEEEEEeCCCcEE
Q 015650 229 LVLVCPGLQKG-----------------------QVRVEHYASKRTKF--IMAHDSRIACFALTQDGQLLATSSTKGTLV 283 (403)
Q Consensus 229 ~~~~~~g~~d~-----------------------~i~v~d~~~~~~~~--~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i 283 (403)
+++.. ..++ .|.+||+.+++... +..+...+.+++|+|+|++|+++ ++. |
T Consensus 188 l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~-v 262 (337)
T 1pby_B 188 VWNQH--ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV-L 262 (337)
T ss_dssp CCCCC--TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE-E
T ss_pred Eeeec--cCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe-E
Confidence 54332 2222 47899998876543 34566678899999999999888 677 9
Q ss_pred EEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 284 RIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 284 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
++||+.+++.+..+.. ...+.+++|+|||++|++++.++.|++||+.+++.
T Consensus 263 ~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 263 ESFDLEKNASIKRVPL---PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp EEEETTTTEEEEEEEC---SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred EEEECCCCcCcceecC---CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 9999999998888874 34678999999999999999999999999998874
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=2.5e-22 Score=197.58 Aligned_cols=240 Identities=7% Similarity=-0.020 Sum_probs=167.2
Q ss_pred CeEEEEEcCCCCEEEEEcC----------CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 87 TLLHISFNQDHGCFAAGTD----------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~~----------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
.|.+++|+|||++|+++.+ ..+.+||+++++........ ++...+..+.|+|++..++.++. +
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-~~~~~~~~~~~SPdG~~la~~~~------~ 134 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPE-VSNAKLQYAGWGPKGQQLIFIFE------N 134 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTT-CCSCCCSBCCBCSSTTCEEEEET------T
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCc-cccccccccEECCCCCEEEEEEC------C
Confidence 4899999999999998864 34889999887653212221 34445788999999987777664 6
Q ss_pred eEEEEECCCCceeEEEe-cCCce------------------eEEEEecCceEEE---ecC--------------------
Q 015650 157 KVMIWDDHQSRCIGELS-FRSEV------------------RSVKLRRDRIIVV---LEQ-------------------- 194 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~-~~~~i------------------~~~~~~~~~~~~~---~d~-------------------- 194 (403)
.|++||+.+++...... +...+ .+++|+|||+.++ .++
T Consensus 135 ~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (723)
T 1xfd_A 135 NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVK 214 (723)
T ss_dssp EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCE
T ss_pred eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcce
Confidence 89999999988766555 33333 7899999998877 232
Q ss_pred --------------eEEEEEcCCceeeeEeecc------CCCceeEEEeeCCCeEEEEee-CCccCeEEEEEccCCceeE
Q 015650 195 --------------KIFVYNFADLKLLHQIETI------ANPKGLCAVSQGVGSLVLVCP-GLQKGQVRVEHYASKRTKF 253 (403)
Q Consensus 195 --------------~i~i~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-g~~d~~i~v~d~~~~~~~~ 253 (403)
.|++||+.+++....+..+ ...+..++|+|+++.++.... +..+..|++||+.+++...
T Consensus 215 ~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 294 (723)
T 1xfd_A 215 PYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK 294 (723)
T ss_dssp EEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE
T ss_pred eccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE
Confidence 7999999888765555543 345677999999874433321 2245689999998877554
Q ss_pred E-e-ecCCceE----EEEEcCCCCEEEE--EeCCC------cEEEEEE-cCCCc--EEEEEecCCCcccEEE-EEeCCCC
Q 015650 254 I-M-AHDSRIA----CFALTQDGQLLAT--SSTKG------TLVRIFN-TLDGT--LLQEVRRGADRAEIYS-LAFSSNA 315 (403)
Q Consensus 254 ~-~-~~~~~i~----~~~~sp~g~~l~s--~~~dg------~~i~iwd-~~~~~--~~~~~~~~~~~~~v~~-l~~s~d~ 315 (403)
+ . .+...+. .++|+|||+.|+. +..++ . |++|| ...++ +...+.. +...+.. ++|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~-l~~~d~~~~~~~~~~~~l~~--~~~~~~~~~~~spdg 371 (723)
T 1xfd_A 295 KHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYH-ITVSSSQPNSSNDNIQSITS--GDWDVTKILAYDEKG 371 (723)
T ss_dssp EEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEE-EEEECSSCCSSSCCCCBSCC--SSSCEEEEEEEETTT
T ss_pred EEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeE-EEEEeccCCCCccceeEeec--CCeEEEeeeEEcCCC
Confidence 3 2 2344443 7899999997775 44566 4 77777 34444 1444442 2234544 6999999
Q ss_pred CEEEEEeCC---CcEEEEEeecCC
Q 015650 316 QWLAVSSDK---GTVHVFNLKVNS 336 (403)
Q Consensus 316 ~~l~s~~~d---g~v~iwd~~~~~ 336 (403)
+.|+..+.+ +.++||+++...
T Consensus 372 ~~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 372 NKIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp TEEEEEESSSCTTCCEEEEECSST
T ss_pred CEEEEEEcCCCCcceEEEEEeCCC
Confidence 999866654 789999998654
No 147
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=4.8e-22 Score=180.74 Aligned_cols=276 Identities=12% Similarity=-0.007 Sum_probs=185.6
Q ss_pred cccCCCCCCeEE-----EEEcCCCCEEEEEcC-Cc---EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCC
Q 015650 79 STSSSPPPTLLH-----ISFNQDHGCFAAGTD-HG---FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP 149 (403)
Q Consensus 79 ~~~~~~~~~i~~-----i~~s~d~~~l~~~~~-~~---i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~ 149 (403)
..+..|...... .+|+|||++|+++++ ++ |.+|++.+++.. .... ++...+....|++++..|+....
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt~-~~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLTE-GRGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--ECCC-SSCBCSSSCEECTTSSEEEEEET
T ss_pred EEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--Eeee-CCCCCccceEEcCCCCEEEEEeC
Confidence 344455555554 789999999988874 44 788888776544 3332 44444445679999988877776
Q ss_pred CCCCCCceEEEEECCCCceeEEEe-cCCceeEEE--EecCceEEEe-------------------------cCeEEEEEc
Q 015650 150 DPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVK--LRRDRIIVVL-------------------------EQKIFVYNF 201 (403)
Q Consensus 150 d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~--~~~~~~~~~~-------------------------d~~i~i~d~ 201 (403)
+ +.|++||+.+++....+. +...+.... +++++.+++. +..|++||+
T Consensus 101 ~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 175 (388)
T 3pe7_A 101 G-----RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL 175 (388)
T ss_dssp T-----TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET
T ss_pred C-----CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEEC
Confidence 6 899999999998777666 444443333 4889888761 257999999
Q ss_pred CCceeeeEeeccCCCceeEEEee-CCCeEEEEeeCCc---cCeEEEEEccCCceeEEeecC--CceEEEEEcCCCCEEEE
Q 015650 202 ADLKLLHQIETIANPKGLCAVSQ-GVGSLVLVCPGLQ---KGQVRVEHYASKRTKFIMAHD--SRIACFALTQDGQLLAT 275 (403)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~---d~~i~v~d~~~~~~~~~~~~~--~~i~~~~~sp~g~~l~s 275 (403)
.+++... +..+...+..+.|+| +++.++++..+.. ...|.++|..++....+..+. ..+..++|+|||+.|+.
T Consensus 176 ~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 176 KTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp TTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred CCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEE
Confidence 9886544 434566678899999 8877665543211 347888888887776666555 35788999999998866
Q ss_pred EeCC-----CcEEEEEEcCCCcEEEEEecCCCccc---EEEEEeCCCCCEEEEE---------eCCCcEEEEEeecCCCC
Q 015650 276 SSTK-----GTLVRIFNTLDGTLLQEVRRGADRAE---IYSLAFSSNAQWLAVS---------SDKGTVHVFNLKVNSGS 338 (403)
Q Consensus 276 ~~~d-----g~~i~iwd~~~~~~~~~~~~~~~~~~---v~~l~~s~d~~~l~s~---------~~dg~v~iwd~~~~~~~ 338 (403)
.+.+ .. |++||+.+++.........+... ...+.|+|||+.|+.. ..+..|++||+.+++.
T Consensus 255 ~~~~~~~~~~~-l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~- 332 (388)
T 3pe7_A 255 VSYLKGSPDRF-IYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ- 332 (388)
T ss_dssp EEEETTCCCEE-EEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-
T ss_pred EecCCCCCcce-EEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-
Confidence 4432 24 99999998875433221111000 1123799999988754 4566899999988662
Q ss_pred CCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCC-----------CceEEEeccCCCEEEEEcc
Q 015650 339 ARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEG-----------SPYIVAFGHQKNTVVILGM 400 (403)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~fs~d~~~l~~~~~ 400 (403)
.++..+.. .+..++|+|||++|+.++.
T Consensus 333 -----------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 333 -----------------------------------HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp -----------------------------------EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred -----------------------------------EEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 12333333 4677899999999987764
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=1.5e-20 Score=168.19 Aligned_cols=254 Identities=11% Similarity=0.075 Sum_probs=167.7
Q ss_pred CCcEEEEEcCC--CeeEEEEecccCcceeEEEEeeeCCeEEEeeCC--CCCCCCCceEEEEECCCCc--eeEEEe-cCCc
Q 015650 105 DHGFRIYNCDP--FREIFRRDFERGGGIGVVEMLFRCNILALVGGG--PDPQYPLNKVMIWDDHQSR--CIGELS-FRSE 177 (403)
Q Consensus 105 ~~~i~iw~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~--~d~~~~~~~i~iwd~~~~~--~~~~~~-~~~~ 177 (403)
+++|.+|.++. ++....... .+......++|++++.++++.. .+ +.|++|++.+++ .+..+. +...
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~--~~~~~p~~~a~spdg~l~~~~~~~~~-----~~v~~~~~~~g~~~~~~~~~~~~~~ 87 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLL--AATQNPTYLALSAKDCLYSVDKEDDE-----GGIAAWQIDGQTAHKLNTVVAPGTP 87 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEE--EECSCCCCEEECTTCEEEEEEEETTE-----EEEEEEEEETTEEEEEEEEEEESCC
T ss_pred CCCEEEEEEcCCCCeEEEeeee--eccCCcceEEEccCCeEEEEEecCCC-----ceEEEEEecCCcEEEeeeeecCCCC
Confidence 34588888764 333322223 2445567789999987444432 25 899999997765 334433 6778
Q ss_pred eeEEEEecCceEEE----ecCeEEEEEcCC-c--eeeeEeecc---------CCCceeEEEeeCCCeEEEEeeCCccCeE
Q 015650 178 VRSVKLRRDRIIVV----LEQKIFVYNFAD-L--KLLHQIETI---------ANPKGLCAVSQGVGSLVLVCPGLQKGQV 241 (403)
Q Consensus 178 i~~~~~~~~~~~~~----~d~~i~i~d~~~-~--~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~d~~i 241 (403)
+..++|+||+.+++ .++.|.+|++.. + +.+..+... ...+..++++|+++ ++++ +..++.|
T Consensus 88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~--~~~~~~v 164 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVI--DLGSDKV 164 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEE--ETTTTEE
T ss_pred CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEE--eCCCCEE
Confidence 89999999998666 258999999963 3 233333221 12356789999988 5443 3457899
Q ss_pred EEEEcc-CCceeEE---ee-cCCceEEEEEcCCCCEEEEE-eCCCcEEEEEEcCC--CcE--EEEEecCCC----cccEE
Q 015650 242 RVEHYA-SKRTKFI---MA-HDSRIACFALTQDGQLLATS-STKGTLVRIFNTLD--GTL--LQEVRRGAD----RAEIY 307 (403)
Q Consensus 242 ~v~d~~-~~~~~~~---~~-~~~~i~~~~~sp~g~~l~s~-~~dg~~i~iwd~~~--~~~--~~~~~~~~~----~~~v~ 307 (403)
.+|++. .+.+... .. ....+..++|+|||++|+++ ..++. |++|++.. ++. +..+..... ...+.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 243 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQ-IASLKYDTQTGAFTQLGIVKTIPADYTAHNGAA 243 (347)
T ss_dssp EEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEEETTTTEEEEEEEEESSCTTCCSCCEEE
T ss_pred EEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCceEEeeeeeecCCCCCCCCcce
Confidence 999998 4544322 22 23367889999999977665 45667 99999874 543 223332111 13588
Q ss_pred EEEeCCCCCEEE-EEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEE
Q 015650 308 SLAFSSNAQWLA-VSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIV 386 (403)
Q Consensus 308 ~l~~s~d~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (403)
.++|+|||++|+ +...++.|.+|+++.... ...+..+..+...+..+
T Consensus 244 ~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~--------------------------------~~~~~~~~~~~~~~~~~ 291 (347)
T 3hfq_A 244 AIRLSHDGHFLYVSNRGYNTLAVFAVTADGH--------------------------------LTLIQQISTEGDFPRDF 291 (347)
T ss_dssp EEEECTTSCEEEEEEETTTEEEEEEECGGGC--------------------------------EEEEEEEECSSSCCCEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEECCCCc--------------------------------EEEeEEEecCCCCcCeE
Confidence 999999999875 555789999999974321 00122233444568899
Q ss_pred EeccCCCEEEEEccC
Q 015650 387 AFGHQKNTVVILGMD 401 (403)
Q Consensus 387 ~fs~d~~~l~~~~~d 401 (403)
+|+|||++|++++.+
T Consensus 292 ~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 292 DLDPTEAFVVVVNQN 306 (347)
T ss_dssp EECTTSSEEEEEETT
T ss_pred EECCCCCEEEEEEcC
Confidence 999999999998765
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=7.9e-22 Score=171.89 Aligned_cols=239 Identities=7% Similarity=-0.095 Sum_probs=174.0
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCC-CeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceE
Q 015650 80 TSSSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDP-FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (403)
.+..|...|.+++|+|+|++|+++.++.|++|++.+ ++.. ......+...+..+.|++++..++.+..+.. ....|
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l 112 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPE--KVDTGFATICNNDHGISPDGALYAISDKVEF-GKSAI 112 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCE--ECCCTTCCCBCSCCEECTTSSEEEEEECTTT-SSCEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCce--EeccccccccccceEECCCCCEEEEEEeCCC-CcceE
Confidence 345578899999999999999999888899999987 6554 3333223467788999999877776652100 01455
Q ss_pred EEEECCCCceeEEEecCCceeEEEEecCceEEE----ecCeEEEEEcCC-ceeeeEeeccCCCceeEEEeeCCCeEEEEe
Q 015650 159 MIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFAD-LKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (403)
Q Consensus 159 ~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (403)
.+|+..+++ ...+.....+..++|+|++..++ .++.+++|++.. ......+..+...+..++|+|+++.++++.
T Consensus 113 ~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 113 YLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 555555554 44455445689999999998766 378888888532 233455556677788999999988655443
Q ss_pred eCCccCeEEEEEcc--CCceeEEeecCCceEEEEEcCCCCEEEEEeCC-----------CcEEEEEEcCCCcEEEEEecC
Q 015650 234 PGLQKGQVRVEHYA--SKRTKFIMAHDSRIACFALTQDGQLLATSSTK-----------GTLVRIFNTLDGTLLQEVRRG 300 (403)
Q Consensus 234 ~g~~d~~i~v~d~~--~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~d-----------g~~i~iwd~~~~~~~~~~~~~ 300 (403)
..++.+++|+++ .+....+..|...+.+++|+|+|++|++++.+ +. |++||+.+++........
T Consensus 192 --~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~-l~~~d~~~~~~~~~~~~~ 268 (297)
T 2ojh_A 192 --SRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR-VQLMDMDGGNVETLFDLF 268 (297)
T ss_dssp --CTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE-EEEEETTSCSCEEEEEEE
T ss_pred --cCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE-EEEEecCCCCceeeeccC
Confidence 357888888875 46667777788889999999999999888765 45 999999888764433321
Q ss_pred CCcccEEEEEeCCCCCEEEEEeCCC
Q 015650 301 ADRAEIYSLAFSSNAQWLAVSSDKG 325 (403)
Q Consensus 301 ~~~~~v~~l~~s~d~~~l~s~~~dg 325 (403)
.|...+..++|+||+++|++++.+.
T Consensus 269 ~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 269 GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCcccccceECCCCCEEEEEEecc
Confidence 2567899999999999998887554
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=2.5e-21 Score=197.65 Aligned_cols=267 Identities=12% Similarity=0.043 Sum_probs=202.8
Q ss_pred CCCCeEEEEEc-CCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcce-eEEEEeeeCCeEEEeeCCCCCCCCCceEE-E
Q 015650 84 PPPTLLHISFN-QDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI-GVVEMLFRCNILALVGGGPDPQYPLNKVM-I 160 (403)
Q Consensus 84 ~~~~i~~i~~s-~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~s~~~d~~~~~~~i~-i 160 (403)
|...|.+++|+ |||++|+++.++.|.+|++...... .+. .+.. .+..+.|+ ++..++.++.+ +.+. +
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~---~~~-~~~~~~~~~~~~s-dg~~l~~~s~~-----~~l~~~ 363 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVL---KVP-EPLRIRYVRRGGD-TKVAFIHGTRE-----GDFLGI 363 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEE---ECS-CCSCEEEEEECSS-SEEEEEEEETT-----EEEEEE
T ss_pred cccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceE---Ecc-CCCcceEEeeeEc-CCCeEEEEECC-----CceEEE
Confidence 34478999999 9999999998777999998766533 243 3555 88999999 98887777666 8898 9
Q ss_pred EECCCCceeEEEecCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeC--
Q 015650 161 WDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG-- 235 (403)
Q Consensus 161 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-- 235 (403)
|++.+++......+...+..++|+|||+.++ .++.|++||+.+++....+..+...+..++|+|+++.++++...
T Consensus 364 ~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~ 443 (1045)
T 1k32_A 364 YDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKH 443 (1045)
T ss_dssp EETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECS
T ss_pred EECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcc
Confidence 9988776543334667899999999999887 37799999999998887777788888999999999866554321
Q ss_pred -----CccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcE-----------------
Q 015650 236 -----LQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL----------------- 293 (403)
Q Consensus 236 -----~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~----------------- 293 (403)
..++.|++||+.++....+..|...+..++|+|||++|++++.++. ..+|+......
T Consensus 444 ~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSL-DPSPDRVVLNFSFEVVSKPFVIPLIPGS 522 (1045)
T ss_dssp STTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCC-CCEECSSSSCEECCSCBEEEEEESSTTC
T ss_pred ccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccC-CcCcchhccccccccCceeEEEEeCCCC
Confidence 1236899999999887778888888999999999999999998877 77776533221
Q ss_pred --------------------------EEEEecCCCcccEEEEEeCCCCCEEEE-----------E--eCCCcEEEEEeec
Q 015650 294 --------------------------LQEVRRGADRAEIYSLAFSSNAQWLAV-----------S--SDKGTVHVFNLKV 334 (403)
Q Consensus 294 --------------------------~~~~~~~~~~~~v~~l~~s~d~~~l~s-----------~--~~dg~v~iwd~~~ 334 (403)
+..+. .+...+..++++|||+++++ . .....|++||+.+
T Consensus 523 ~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~--~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~ 600 (1045)
T 1k32_A 523 PNPTKLVPRSMTSEAGEYDLNDMYKRSSPIN--VDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT 600 (1045)
T ss_dssp CCGGGCCCGGGSCCCCCCCCTTGGGGCEECS--CCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTT
T ss_pred CCccccCcCccccccccccccCHhHceEEcC--CCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCC
Confidence 11111 14467889999999988875 1 2344677777777
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 335 NSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
++. ..+. ..+..++|||||++|++++.|+
T Consensus 601 ~~~------------------------------------~~l~---~~v~~~~~S~DG~~l~~~~~~~ 629 (1045)
T 1k32_A 601 RKV------------------------------------TEVK---NNLTDLRLSADRKTVMVRKDDG 629 (1045)
T ss_dssp CCE------------------------------------EEEE---EEEEEEEECTTSCEEEEEETTS
T ss_pred CcE------------------------------------EEee---cCcceEEECCCCCEEEEEcCCc
Confidence 652 1111 3467789999999999988763
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=8.8e-21 Score=169.77 Aligned_cols=241 Identities=12% Similarity=0.146 Sum_probs=164.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEc---CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC-CCCCCCCceEE
Q 015650 84 PPPTLLHISFNQDHGCFAAGT---DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG-PDPQYPLNKVM 159 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~---~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~~~~~~i~ 159 (403)
+...+..++|+|||++++++. ++.|++|++++++......+. .+...+..++|++++..++.++ .+ +.|.
T Consensus 38 ~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~-~~~~~p~~~a~spdg~~l~~~~~~~-----~~v~ 111 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVV-APGTPPAYVAVDEARQLVYSANYHK-----GTAE 111 (347)
T ss_dssp ECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEE-EESCCCSEEEEETTTTEEEEEETTT-----TEEE
T ss_pred ccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeee-cCCCCCEEEEECCCCCEEEEEeCCC-----CEEE
Confidence 445667899999999544444 245999999776654434433 3555677889999987555544 55 8999
Q ss_pred EEECCC-Cc--eeEEEecC----------CceeEEEEecCceEEEe---cCeEEEEEcC-Cceeee--Eeecc-CCCcee
Q 015650 160 IWDDHQ-SR--CIGELSFR----------SEVRSVKLRRDRIIVVL---EQKIFVYNFA-DLKLLH--QIETI-ANPKGL 219 (403)
Q Consensus 160 iwd~~~-~~--~~~~~~~~----------~~i~~~~~~~~~~~~~~---d~~i~i~d~~-~~~~~~--~~~~~-~~~~~~ 219 (403)
+|++.. +. .+..+.+. ..+.+++|+|++++++. ++.|++|++. +++... .+... ......
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 999963 32 33333322 23788999999995553 6789999998 454322 22222 224567
Q ss_pred EEEeeCCCeEEEEeeCCccCeEEEEEccC--CceeE---EeecC------CceEEEEEcCCCCEEE-EEeCCCcEEEEEE
Q 015650 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKF---IMAHD------SRIACFALTQDGQLLA-TSSTKGTLVRIFN 287 (403)
Q Consensus 220 ~~~~~~~~~~~~~~~g~~d~~i~v~d~~~--~~~~~---~~~~~------~~i~~~~~sp~g~~l~-s~~~dg~~i~iwd 287 (403)
++|+|+++.++++. ..++.|.+|+++. +.... +.... ..+..++|+|||++|+ +...++. |.+||
T Consensus 192 ~~~spdg~~l~v~~--~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~-v~v~~ 268 (347)
T 3hfq_A 192 LVFSPDGQYAFLAG--ELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT-LAVFA 268 (347)
T ss_dssp EEECTTSSEEEEEE--TTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE-EEEEE
T ss_pred EEECCCCCEEEEEe--CCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE-EEEEE
Confidence 89999998666553 4678999999885 44322 22222 3588999999999885 4555788 99999
Q ss_pred cCC-C--cEEEEEecCCCcccEEEEEeCCCCCEEEEEeC-CCcEEEEEeecC
Q 015650 288 TLD-G--TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSD-KGTVHVFNLKVN 335 (403)
Q Consensus 288 ~~~-~--~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~-dg~v~iwd~~~~ 335 (403)
+.. + +.+..+.. +...+..++|+|||++|++++. ++.|.+|+++..
T Consensus 269 ~~~~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 269 VTADGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLT 318 (347)
T ss_dssp ECGGGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ECCCCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCC
Confidence 973 2 44445543 3456889999999999888875 589999977643
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=9e-20 Score=164.12 Aligned_cols=239 Identities=13% Similarity=0.091 Sum_probs=162.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-----CcEEEEEcCC--CeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCc
Q 015650 84 PPPTLLHISFNQDHGCFAAGTD-----HGFRIYNCDP--FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~~-----~~i~iw~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~ 156 (403)
+...+..++|+|||++|++++. +.|.+|+++. ++........ .+......+.+ ....++++...+ +
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~-~~~~~p~~~~~-dg~~l~~~~~~~-----~ 120 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQK-TMGADPCYLTT-NGKNIVTANYSG-----G 120 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEE-CSSSCEEEEEE-CSSEEEEEETTT-----T
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEec-cCCCCcEEEEE-CCCEEEEEECCC-----C
Confidence 5667788999999999888875 3599999876 3333323332 23445566666 333344444455 8
Q ss_pred eEEEEECCCCceeEE----Eec-----------CCceeEEEEecCceEEE-e---cCeEEEEEcCCcee------e----
Q 015650 157 KVMIWDDHQSRCIGE----LSF-----------RSEVRSVKLRRDRIIVV-L---EQKIFVYNFADLKL------L---- 207 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~----~~~-----------~~~i~~~~~~~~~~~~~-~---d~~i~i~d~~~~~~------~---- 207 (403)
.|.+|++.....+.. +.+ ...+.+++|+|++++++ . ++.|++|++..... +
T Consensus 121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence 999999975433221 111 12357899999998655 2 67999999875331 1
Q ss_pred --eEe-eccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEe------ecCCceEEEEEcCCCCEEEEEeC
Q 015650 208 --HQI-ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM------AHDSRIACFALTQDGQLLATSST 278 (403)
Q Consensus 208 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~------~~~~~i~~~~~sp~g~~l~s~~~ 278 (403)
..+ .........++|+|+++.++++. ..++.|.+|++.++....+. .+......++|+|||++|+++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~--~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 201 TPEAFKVAPGSGPRHLIFNSDGKFAYLIN--EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEE--TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred cccceecCCCCCCeEEEEcCCCCEEEEEc--CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 111 12234456799999998666553 45789999999876543322 22345679999999999977666
Q ss_pred C--CcEEEEEEcC--CCc--EEEEEecCCCcccEEEEEeCCCCCEEEEEe-CCCcEEEEEeecC
Q 015650 279 K--GTLVRIFNTL--DGT--LLQEVRRGADRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVN 335 (403)
Q Consensus 279 d--g~~i~iwd~~--~~~--~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~ 335 (403)
+ +. |.+|++. +++ .+..+.. ...+.+++|+|||++|++++ .++.|.+|+++..
T Consensus 279 ~~~~~-i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 279 LKADG-VAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQA 338 (361)
T ss_dssp SSSCE-EEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCCE-EEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCEEEEEECCCCCEEEEEEECC
Confidence 5 77 9999985 455 3434442 34678999999999988887 6789999887643
No 153
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=5.2e-20 Score=164.91 Aligned_cols=205 Identities=11% Similarity=0.072 Sum_probs=157.5
Q ss_pred eeEEEEeeeCCeEEEeeCCCCC--CCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE----ecCeEEEEEcCC
Q 015650 130 IGVVEMLFRCNILALVGGGPDP--QYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFAD 203 (403)
Q Consensus 130 ~~v~~~~~~~~~~~~~s~~~d~--~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~d~~i~i~d~~~ 203 (403)
..+..+.+++++..++.++.+. ....+.|.+||..+++.+..+.....+..++|++++..++ .++.|.+||+.+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 4567888888764433332110 0001789999999999999888767788999999987544 268999999999
Q ss_pred ceeeeEeeccCCC---------ceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEee-cCCceEEEEEcCCCCEE
Q 015650 204 LKLLHQIETIANP---------KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA-HDSRIACFALTQDGQLL 273 (403)
Q Consensus 204 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~-~~~~i~~~~~sp~g~~l 273 (403)
++.+..+..+... ...++++++++.++++..+ .++.|.+||..+++...... +...+.+++|+|+|++|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-CCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 9988887654322 4678999999876665423 57899999999876554433 66668899999999999
Q ss_pred EEEeCCCcEEEEEEcCCCcEEEEEecCC--CcccEEEEEeCCCCCEEEEEe-CCCcEEEEEeecCC
Q 015650 274 ATSSTKGTLVRIFNTLDGTLLQEVRRGA--DRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVNS 336 (403)
Q Consensus 274 ~s~~~dg~~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~~ 336 (403)
++++.++. |.+||+.+++.+..+.... +...+.+++|+|+|++|++++ .++.|.+||+.+++
T Consensus 200 ~~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 200 YTTNADGE-LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp EEECTTSE-EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred EEEcCCCe-EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 99999998 9999999999888876421 244688999999999877666 45999999998877
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=3.3e-20 Score=165.88 Aligned_cols=228 Identities=10% Similarity=0.040 Sum_probs=168.0
Q ss_pred EEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeE-EEeeCCCCCCCCCceEEEEECCCCc
Q 015650 90 HISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDDHQSR 167 (403)
Q Consensus 90 ~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~~~~~~i~iwd~~~~~ 167 (403)
.+++++++++++++. ++.|++||..+++... .+..+....+..+.+++++. ++++...+ +.|.+||+.+++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~ 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYK--SCVMPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCK 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEE--EEECSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEE--EEecCCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCc
Confidence 456788888888887 5559999998877653 33312222456788888874 44555556 899999999998
Q ss_pred eeEEEecC-------CceeEEEEecCceEEE-e--c------------CeEEEEEcCCceee---eEeeccCCCceeEEE
Q 015650 168 CIGELSFR-------SEVRSVKLRRDRIIVV-L--E------------QKIFVYNFADLKLL---HQIETIANPKGLCAV 222 (403)
Q Consensus 168 ~~~~~~~~-------~~i~~~~~~~~~~~~~-~--d------------~~i~i~d~~~~~~~---~~~~~~~~~~~~~~~ 222 (403)
.+..+... ..+..++|+||+++++ . + +.|++||+.+++.. ..+.. ...+..+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~ 155 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRA 155 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEE
T ss_pred EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeE
Confidence 88777632 2378999999998777 2 3 89999999885433 33332 335778889
Q ss_pred eeCCCeEEEEeeCCccCeEEEEEccCCceeE-Eeec--------------------------------------------
Q 015650 223 SQGVGSLVLVCPGLQKGQVRVEHYASKRTKF-IMAH-------------------------------------------- 257 (403)
Q Consensus 223 ~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~-~~~~-------------------------------------------- 257 (403)
+++++ +++ . + +.|.+||..+++... +..+
T Consensus 156 s~dg~-l~~-~-~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 229 (349)
T 1jmx_B 156 ADDGS-LYV-A-G---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 229 (349)
T ss_dssp CTTSC-EEE-E-S---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred CCCCc-EEE-c-c---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence 99988 544 2 2 349999987755332 2211
Q ss_pred ------------------------CCceEEEEEcC-CCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeC
Q 015650 258 ------------------------DSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFS 312 (403)
Q Consensus 258 ------------------------~~~i~~~~~sp-~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 312 (403)
...+..++|+| +|++|+++ ++. |.+||+.+++.+..+.. ...+.+++|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-v~~~d~~~~~~~~~~~~---~~~~~~~~~s 303 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-LAKYDLKQRKLIKAANL---DHTYYCVAFD 303 (349)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-EEEEETTTTEEEEEEEC---SSCCCEEEEC
T ss_pred ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-EEEEECccCeEEEEEcC---CCCccceEEC
Confidence 11345778889 99999888 777 99999999998888874 2457899999
Q ss_pred CCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 313 SNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 313 ~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
|||++|++++.++.|++||+++++.
T Consensus 304 ~dg~~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 304 KKGDKLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp SSSSCEEEESBSSEEEEEETTTTEE
T ss_pred CCCCEEEEecCCCeEEEEeccccce
Confidence 9999998888899999999988774
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=1.8e-19 Score=161.04 Aligned_cols=221 Identities=10% Similarity=0.037 Sum_probs=162.3
Q ss_pred EeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCC--ceeEEEEecCceEEE----ecCeEEEEEcCCceeee
Q 015650 135 MLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS--EVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLH 208 (403)
Q Consensus 135 ~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~ 208 (403)
+++.+++.++++++.+ +.|++||+.+++.+..+.... .+..++|+|++..++ .++.|++||+.+++.+.
T Consensus 5 ~~~~~~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCTTCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccccCCCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 4567778888888877 999999999999988888544 688999999997544 37899999999998877
Q ss_pred EeeccC------CCceeEEEeeCCCeEEEEeeC---------CccCeEEEEEccCCce---eEEeecCCceEEEEEcCCC
Q 015650 209 QIETIA------NPKGLCAVSQGVGSLVLVCPG---------LQKGQVRVEHYASKRT---KFIMAHDSRIACFALTQDG 270 (403)
Q Consensus 209 ~~~~~~------~~~~~~~~~~~~~~~~~~~~g---------~~d~~i~v~d~~~~~~---~~~~~~~~~i~~~~~sp~g 270 (403)
.+.... ..+..++++|+++.++++... ..++.|.+||+.+++. .....+...+.+++|+|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 775432 226789999999876655311 0148999999987332 2223344568899999999
Q ss_pred CEEEEEeCCCcEEEEEEcCCCcEEEEEecCC-------------------------------------------------
Q 015650 271 QLLATSSTKGTLVRIFNTLDGTLLQEVRRGA------------------------------------------------- 301 (403)
Q Consensus 271 ~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~------------------------------------------------- 301 (403)
+ ++++ ++. |++||+.+++.+..+..+.
T Consensus 160 ~-l~~~--~~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 160 S-LYVA--GPD-IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp C-EEEE--SSS-EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred c-EEEc--cCc-EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 9 5554 345 9999999998877665321
Q ss_pred -----------------CcccEEEEEeCC-CCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccc
Q 015650 302 -----------------DRAEIYSLAFSS-NAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVL 363 (403)
Q Consensus 302 -----------------~~~~v~~l~~s~-d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (403)
+...+..++|+| |+++|+++ ++.|++||+.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~-------------------------- 287 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKL-------------------------- 287 (349)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEE--------------------------
T ss_pred EEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeE--------------------------
Confidence 001345678889 99998888 88999999988762
Q ss_pred cceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 364 PKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
...+. ....+..++|+|||++|++++.+|
T Consensus 288 ---------~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 316 (349)
T 1jmx_B 288 ---------IKAAN-LDHTYYCVAFDKKGDKLYLGGTFN 316 (349)
T ss_dssp ---------EEEEE-CSSCCCEEEECSSSSCEEEESBSS
T ss_pred ---------EEEEc-CCCCccceEECCCCCEEEEecCCC
Confidence 11122 234577899999999999887765
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=8.9e-19 Score=157.61 Aligned_cols=265 Identities=13% Similarity=0.082 Sum_probs=167.6
Q ss_pred CCCEEEEEc-----CCcEEEEEcCC--CeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCC--C
Q 015650 96 DHGCFAAGT-----DHGFRIYNCDP--FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ--S 166 (403)
Q Consensus 96 d~~~l~~~~-----~~~i~iw~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~--~ 166 (403)
...++.+|+ +++|.+|.++. ++......+ +......++|++++..+++++.+. ...+.|.+|++.. +
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~---~~~~p~~l~~spdg~~l~~~~~~~-~~~~~v~~~~~~~~~g 87 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA---EVANPSYLIPSADGKFVYSVNEFS-KDQAAVSAFAFDKEKG 87 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE---ECSCCCSEEECTTSSEEEEEECCS-STTCEEEEEEEETTTT
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc---cCCCCceEEECCCCCEEEEEEccC-CCCCcEEEEEEeCCCC
Confidence 344555553 34599998754 333322222 444556688899887665554420 0117999998865 4
Q ss_pred ce--eEEEe-cCCceeEEEEecCceEEE----ecCeEEEEEcCCceeeeEe---ecc-----------CCCceeEEEeeC
Q 015650 167 RC--IGELS-FRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQI---ETI-----------ANPKGLCAVSQG 225 (403)
Q Consensus 167 ~~--~~~~~-~~~~i~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~~~---~~~-----------~~~~~~~~~~~~ 225 (403)
+. +.... +......+++ ++.+++ .++.|.+|++.....+..+ ..+ ...+..++|+|+
T Consensus 88 ~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd 165 (361)
T 3scy_A 88 TLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD 165 (361)
T ss_dssp EEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT
T ss_pred cEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC
Confidence 33 23333 4456777777 665544 3789999999754322211 111 112356899999
Q ss_pred CCeEEEEeeCCccCeEEEEEccCCc-------e-------eEEeecCCceEEEEEcCCCCEEEEEe-CCCcEEEEEEcCC
Q 015650 226 VGSLVLVCPGLQKGQVRVEHYASKR-------T-------KFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLD 290 (403)
Q Consensus 226 ~~~~~~~~~g~~d~~i~v~d~~~~~-------~-------~~~~~~~~~i~~~~~sp~g~~l~s~~-~dg~~i~iwd~~~ 290 (403)
++.++++. ..++.|.+|++.... + .....+...+..++|+|||++|++++ .++. |.+||+.+
T Consensus 166 g~~l~~~~--~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~~~ 242 (361)
T 3scy_A 166 GKYLLADD--LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT-VIAFRYAD 242 (361)
T ss_dssp SSEEEEEE--TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE-EEEEEEET
T ss_pred CCEEEEEe--CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe-EEEEEecC
Confidence 98766553 457899999987532 2 11223455678999999999888777 5777 99999987
Q ss_pred CcE--EEEEecC-CCcccEEEEEeCCCCCEEEEEeC--CCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccc
Q 015650 291 GTL--LQEVRRG-ADRAEIYSLAFSSNAQWLAVSSD--KGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPK 365 (403)
Q Consensus 291 ~~~--~~~~~~~-~~~~~v~~l~~s~d~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (403)
++. +..+... .+......++|+|||++|+++.. ++.|.+|+++......
T Consensus 243 g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~-------------------------- 296 (361)
T 3scy_A 243 GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL-------------------------- 296 (361)
T ss_dssp TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE--------------------------
T ss_pred CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE--------------------------
Confidence 754 3333321 12245789999999999877665 4899999997432100
Q ss_pred eeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccC
Q 015650 366 YFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMD 401 (403)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~d 401 (403)
..+..+.. ...+..++|+|||++|++++.+
T Consensus 297 -----~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 297 -----TKVGYQLT-GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp -----EEEEEEEC-SSCCCEEEECTTSCEEEEEETT
T ss_pred -----EEeeEecC-CCCCceEEECCCCCEEEEEECC
Confidence 00122222 4567889999999999998754
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=2.6e-19 Score=161.38 Aligned_cols=241 Identities=11% Similarity=0.101 Sum_probs=165.6
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEcC-CCeeEEEEecccCcceeEEEEeeeCCeE--EEeeCC-------------
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCD-PFREIFRRDFERGGGIGVVEMLFRCNIL--ALVGGG------------- 148 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~s~~------------- 148 (403)
...+..++|+|||++|++++.+.|.+|+++ +++........ .+. ....+.+++++. ++++++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~-~~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHP-IGG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEE-CCS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEee-cCC-CCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 346778999999998888775599999997 55543222221 011 233478899987 454543
Q ss_pred CCCCCCCceEEEEECC-CCceeEEEe-----cCCceeEEEEecCceEEE-e---cCeEEEEEcC-Cceee--eEeec--c
Q 015650 149 PDPQYPLNKVMIWDDH-QSRCIGELS-----FRSEVRSVKLRRDRIIVV-L---EQKIFVYNFA-DLKLL--HQIET--I 213 (403)
Q Consensus 149 ~d~~~~~~~i~iwd~~-~~~~~~~~~-----~~~~i~~~~~~~~~~~~~-~---d~~i~i~d~~-~~~~~--~~~~~--~ 213 (403)
.+ +.+.+|++. +++....+. +...+.+++|+|||++++ . ++.|++||+. +++.. ..+.. +
T Consensus 117 ~~-----g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~ 191 (365)
T 1jof_A 117 FA-----GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP 191 (365)
T ss_dssp SC-----CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred CC-----ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC
Confidence 45 899999997 466554443 346789999999998666 3 5689999998 66543 23331 2
Q ss_pred CCCceeEEEeeCCCeEEEEeeCCccCeEEEEEcc--CCcee----EEee-------cCC------ceEEEE-EcCCCCEE
Q 015650 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA--SKRTK----FIMA-------HDS------RIACFA-LTQDGQLL 273 (403)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~--~~~~~----~~~~-------~~~------~i~~~~-~sp~g~~l 273 (403)
......++|+|+++.++++. ..++.|.+|+++ +++.. .+.. |.. .+..++ |+|||++|
T Consensus 192 g~~p~~~~~spdg~~l~v~~--~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALM--EAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEE--TTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred CCCCCEeEECCCCCEEEEEE--CCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEE
Confidence 45567899999998766553 457899999876 34332 1221 122 478999 99999998
Q ss_pred EEEeCCC------cEEEEEEcC-CCcEEEEEe-cCCCcccEEEEEeCC---CCCEEEEEeC-CCcEEEEEeecC
Q 015650 274 ATSSTKG------TLVRIFNTL-DGTLLQEVR-RGADRAEIYSLAFSS---NAQWLAVSSD-KGTVHVFNLKVN 335 (403)
Q Consensus 274 ~s~~~dg------~~i~iwd~~-~~~~~~~~~-~~~~~~~v~~l~~s~---d~~~l~s~~~-dg~v~iwd~~~~ 335 (403)
++++.+. . |.+|++. +++...... ...+...+..++|+| ||++|++++. ++.|.+|+++..
T Consensus 270 ~v~~~~~~~~~~~~-i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 270 FASSRANKFELQGY-IAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEESSTTSCCE-EEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEECCCCCCCCCCe-EEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 8766432 7 9999996 666543211 111234566789999 8999999886 489999999865
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=2.4e-21 Score=190.44 Aligned_cols=237 Identities=9% Similarity=-0.009 Sum_probs=163.8
Q ss_pred EEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcce---eEEEEeeeCCeEEEeeCCC---------CCCCCCce
Q 015650 90 HISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI---GVVEMLFRCNILALVGGGP---------DPQYPLNK 157 (403)
Q Consensus 90 ~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~s~~~---------d~~~~~~~ 157 (403)
.++|+|||++++.+.++.|++|++.+++.. ..+. ++.. .+..+.|+||+..++.++. + +.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~--~~~~-~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~-----~~ 91 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSY--TILS-NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT-----AT 91 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEE--EEEC-HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE-----EE
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEE--EEEc-cccccccceeeEEECCCCCeEEEEecCceeEEeecc-----eE
Confidence 578999998777776777999999887754 3333 2322 3789999999988776654 5 89
Q ss_pred EEEEECCCCceeEEEecCCceeEEEEecCceEEE--ecCeEEEEEcCCceeeeEe-eccCC-----------------Cc
Q 015650 158 VMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQI-ETIAN-----------------PK 217 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~-~~~~~-----------------~~ 217 (403)
|++||+.+++.+........+..++|+|||+.++ .++.|++||+.+++..+.. .++.. ..
T Consensus 92 i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 92 YYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp EEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred EEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 9999999987632122246688999999998887 6999999999887765432 12111 11
Q ss_pred eeEEEeeCCCeEEEEeeCC-------------------------------ccCeEEEEEccCCcee---E------Eeec
Q 015650 218 GLCAVSQGVGSLVLVCPGL-------------------------------QKGQVRVEHYASKRTK---F------IMAH 257 (403)
Q Consensus 218 ~~~~~~~~~~~~~~~~~g~-------------------------------~d~~i~v~d~~~~~~~---~------~~~~ 257 (403)
..++|+||++.++++.... ....|++||+.++... . +..|
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 4799999999766554110 1127889999886541 2 2357
Q ss_pred CCceEEEEEcCCCCEEEEEeCC----CcEEEEEE----cCCCcEEEEEe---cCCCcccEE-----EEEeCCCCCEEEE-
Q 015650 258 DSRIACFALTQDGQLLATSSTK----GTLVRIFN----TLDGTLLQEVR---RGADRAEIY-----SLAFSSNAQWLAV- 320 (403)
Q Consensus 258 ~~~i~~~~~sp~g~~l~s~~~d----g~~i~iwd----~~~~~~~~~~~---~~~~~~~v~-----~l~~s~d~~~l~s- 320 (403)
...+..++|+||++++++.... .. |++|| +.++++...+. . .+...+. .+.|+|||+.|+.
T Consensus 252 ~~~~~~~~~SpD~~~~~~~~~~~~~~~~-l~~~d~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 252 DYYFSWLTWVTDERVCLQWLKRVQNVSV-LSICDFREDWQTWDCPKTQEHIEE-SRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSTTEEE-EEEEEECSSSSSEECCGGGEEEEE-CSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred cceEEEeEEeCCCeEEEEEeccccCeEE-EEEEcccCCCCCCceEEEEecccc-cCCceEccccCCccEECCCCCeEEEE
Confidence 7789999999998877764432 24 88899 77776554442 1 1445565 7899999996554
Q ss_pred -EeCCCc--EEEEEeecCC
Q 015650 321 -SSDKGT--VHVFNLKVNS 336 (403)
Q Consensus 321 -~~~dg~--v~iwd~~~~~ 336 (403)
...+|. |++|++.+++
T Consensus 330 ~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 330 FSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp EECTTSCEEEEEESSCSTT
T ss_pred EEccCCceEEEEEECCCCc
Confidence 445664 5555655544
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=3.5e-20 Score=177.69 Aligned_cols=194 Identities=10% Similarity=-0.001 Sum_probs=144.9
Q ss_pred cceeEEEEeeeCCeEEEeeCCC-CCCCCCceEEEEECCCCceeEEEecC-CceeEEEEecCceEEE-ec-----CeEEEE
Q 015650 128 GGIGVVEMLFRCNILALVGGGP-DPQYPLNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRDRIIVV-LE-----QKIFVY 199 (403)
Q Consensus 128 ~~~~v~~~~~~~~~~~~~s~~~-d~~~~~~~i~iwd~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~-~d-----~~i~i~ 199 (403)
....+..+.|++|+..++.++. + |+++||++.+++..+...+. ..+..+.|+|| ++++ .+ ....+|
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~-----g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSE-----GSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALF 93 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEET-----TEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEE
T ss_pred hccchheeecCCCCCeEEEEEccC-----CceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEE
Confidence 3557999999999888887665 7 99999998666654444455 58999999999 6555 32 344554
Q ss_pred EcCC---ceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEE
Q 015650 200 NFAD---LKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATS 276 (403)
Q Consensus 200 d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~ 276 (403)
.+.. +... .+.. .......+++|+++.+++++ + .++.+.+||+.+++...+..+.. .+++|+|||++|+++
T Consensus 94 ~~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s-~-~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~ 167 (582)
T 3o4h_A 94 KVNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTG-A-TEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGL 167 (582)
T ss_dssp EEETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEE-E-CSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEE
T ss_pred EEeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEe-c-CCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEE
Confidence 4432 2222 3322 23445779999999887775 3 33455599999988777765555 889999999999988
Q ss_pred eCC----CcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCC--cEEEEEeecCCC
Q 015650 277 STK----GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG--TVHVFNLKVNSG 337 (403)
Q Consensus 277 ~~d----g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg--~v~iwd~~~~~~ 337 (403)
+.+ +. |++||+.+++.. .+.. +...+..++|||||++|+++..++ .|++||+++++.
T Consensus 168 ~~~~~~~~~-i~~~d~~~g~~~-~l~~--~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 168 GFFGGGRVS-LFTSNLSSGGLR-VFDS--GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp EEEETTEEE-EEEEETTTCCCE-EECC--SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE
T ss_pred EEcCCCCeE-EEEEcCCCCCce-Eeec--CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE
Confidence 877 67 999999888875 4443 567899999999999999888888 899999988774
No 160
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.83 E-value=1.3e-19 Score=164.89 Aligned_cols=233 Identities=11% Similarity=-0.013 Sum_probs=157.6
Q ss_pred eEEEEEcCCCCEEEEEcCC----cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEEC
Q 015650 88 LLHISFNQDHGCFAAGTDH----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (403)
Q Consensus 88 i~~i~~s~d~~~l~~~~~~----~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~ 163 (403)
+..++|+|||++|+...+. .|.+|++.+++.. .+..++......+.|++++..++....+ +.|++||+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~ 109 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV---QLTEGKGDNTFGGFISTDERAFFYVKNE-----LNLMKVDL 109 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE---ECCCSSCBCTTTCEECTTSSEEEEEETT-----TEEEEEET
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE---EeecCCCCccccceECCCCCEEEEEEcC-----CcEEEEEC
Confidence 6677999999998877532 3888888776543 2321222222236689998877776666 78999999
Q ss_pred CCCceeEEEe-cCCceeE-------------------EEEecCceEEE--------ecCeEEEEEcCCceeeeEeeccCC
Q 015650 164 HQSRCIGELS-FRSEVRS-------------------VKLRRDRIIVV--------LEQKIFVYNFADLKLLHQIETIAN 215 (403)
Q Consensus 164 ~~~~~~~~~~-~~~~i~~-------------------~~~~~~~~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~ 215 (403)
.+++...... +...... +.|+|++..++ .+..|++||+.+++..... .+..
T Consensus 110 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~ 188 (396)
T 3c5m_A 110 ETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTA 188 (396)
T ss_dssp TTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESS
T ss_pred CCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCc
Confidence 9887665555 3322222 24556665544 1347999999887765444 4556
Q ss_pred CceeEEEee-CCCeEEEEeeCCcc----CeEEEEEccCCceeEEeec--CCceEEEEEcCCCCEEEEEeCC-----CcEE
Q 015650 216 PKGLCAVSQ-GVGSLVLVCPGLQK----GQVRVEHYASKRTKFIMAH--DSRIACFALTQDGQLLATSSTK-----GTLV 283 (403)
Q Consensus 216 ~~~~~~~~~-~~~~~~~~~~g~~d----~~i~v~d~~~~~~~~~~~~--~~~i~~~~~sp~g~~l~s~~~d-----g~~i 283 (403)
.+..+.|+| +++.++++..+ .. ..|.+||+.++....+..+ ...+..++|+|||++|+.++.+ +. |
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~-~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~-l 266 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEG-PHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRV-I 266 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECS-CSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEE-E
T ss_pred ccccceECCCCCCEEEEEecC-CCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccce-E
Confidence 678889999 66656555422 22 5788999887766555443 2357889999999988777654 45 9
Q ss_pred EEEEcCCCcEEEEEecCCCcccEEEEEeCC-CCCEEEEEe----------------CCCcEEEEEeecCC
Q 015650 284 RIFNTLDGTLLQEVRRGADRAEIYSLAFSS-NAQWLAVSS----------------DKGTVHVFNLKVNS 336 (403)
Q Consensus 284 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-d~~~l~s~~----------------~dg~v~iwd~~~~~ 336 (403)
++||+.+++....... . ... +.|+| ||++|++++ .+..|++||+.+++
T Consensus 267 ~~~d~~~g~~~~l~~~---~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 267 YKANPETLENEEVMVM---P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp EEECTTTCCEEEEEEC---C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred EEEECCCCCeEEeeeC---C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 9999988876543332 1 233 89999 999888754 34789999998766
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=8e-18 Score=151.58 Aligned_cols=254 Identities=10% Similarity=-0.004 Sum_probs=167.5
Q ss_pred CcEEEEEcC--CCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC-CCceeEEEec--CCceeE
Q 015650 106 HGFRIYNCD--PFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH-QSRCIGELSF--RSEVRS 180 (403)
Q Consensus 106 ~~i~iw~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~-~~~~~~~~~~--~~~i~~ 180 (403)
++|.+|+++ +++..............+..+++++++..+++++. +.|.+|++. +++......+ ...+..
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~------~~v~~~~~~~~g~~~~~~~~~~~g~~~~ 87 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM------KKWSSFAVKSPTEIVHEASHPIGGHPRA 87 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB------TEEEEEEEEETTEEEEEEEEECCSSGGG
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc------ceEEEEEECCCCCEEEeeEeecCCCCcc
Confidence 458888764 34433222221123335677889999887776665 479999997 7776554442 234667
Q ss_pred EEEecCceE--EE----------------ecCeEEEEEcC-CceeeeEeec----cCCCceeEEEeeCCCeEEEEeeCCc
Q 015650 181 VKLRRDRII--VV----------------LEQKIFVYNFA-DLKLLHQIET----IANPKGLCAVSQGVGSLVLVCPGLQ 237 (403)
Q Consensus 181 ~~~~~~~~~--~~----------------~d~~i~i~d~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~ 237 (403)
++|+||+++ ++ .++++.+|++. +++....+.. +...+..++|+|+++.++++. ..
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~--~~ 165 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD--LT 165 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE--TT
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc--CC
Confidence 899999984 32 25689999997 4665444432 345677899999998655443 34
Q ss_pred cCeEEEEEcc-CCceeE---Ee--ecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcC--CCcEE---EEEecCC----
Q 015650 238 KGQVRVEHYA-SKRTKF---IM--AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTL--DGTLL---QEVRRGA---- 301 (403)
Q Consensus 238 d~~i~v~d~~-~~~~~~---~~--~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~--~~~~~---~~~~~~~---- 301 (403)
++.|++||+. +++... +. .|...+..++|+|||++|++++. ++. |.+|++. +++.. ..+....
T Consensus 166 ~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
T 1jof_A 166 ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNR-ICEYVIDPATHMPVYTHHSFPLIPPGIP 244 (365)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCe-EEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence 6799999998 655432 22 23567899999999999988775 567 9999765 56543 2232110
Q ss_pred -Ccc------cEEEEE-eCCCCCEEEEEeCC-C-----cEEEEEeec-CCCCCCCCCCCCCCCCCcccccccccccccce
Q 015650 302 -DRA------EIYSLA-FSSNAQWLAVSSDK-G-----TVHVFNLKV-NSGSARSEPRSTSDPTLPTSSLSFIKGVLPKY 366 (403)
Q Consensus 302 -~~~------~v~~l~-~s~d~~~l~s~~~d-g-----~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (403)
+.. .+..++ |+|||++|+++..+ + .|.+|+++. ++. .
T Consensus 245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~-~--------------------------- 296 (365)
T 1jof_A 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI-E--------------------------- 296 (365)
T ss_dssp CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE-E---------------------------
T ss_pred CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCE-E---------------------------
Confidence 111 588999 99999998876533 2 899999973 331 0
Q ss_pred eeeeeeeE-EEEEeCCCceEEEecc---CCCEEEEEccC
Q 015650 367 FSSEWSVA-QFRLVEGSPYIVAFGH---QKNTVVILGMD 401 (403)
Q Consensus 367 ~~~~~~~~-~~~~~~~~~~~~~fs~---d~~~l~~~~~d 401 (403)
.+. ....+...+..++|+| ||++|++++.+
T Consensus 297 -----~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~ 330 (365)
T 1jof_A 297 -----KQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ 330 (365)
T ss_dssp -----EEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS
T ss_pred -----EeeeeeecCCCCcccceecCCCcCCCEEEEEEcC
Confidence 000 1222334567789999 89999999875
No 162
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=5.3e-19 Score=162.54 Aligned_cols=196 Identities=11% Similarity=0.102 Sum_probs=144.2
Q ss_pred eEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCC-----------c-----eeEEEecCCceeEEEEecCceEEE---
Q 015650 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS-----------R-----CIGELSFRSEVRSVKLRRDRIIVV--- 191 (403)
Q Consensus 131 ~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~-----------~-----~~~~~~~~~~i~~~~~~~~~~~~~--- 191 (403)
.+..++++++...+++++.+ + +++|+.... . ....+.+...|.+++|+|++.+++
T Consensus 38 ~~n~lavs~~~~~l~~~~~d-----g-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~ 111 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGAS-----G-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACM 111 (434)
T ss_dssp CCBCEEEETTTTEEEEEETT-----E-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEE
T ss_pred CccEEEEecCCCEEEEECCC-----E-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEE
Confidence 34556677766666666665 5 888874311 0 112233567899999999999888
Q ss_pred -e---cCeEEEEEcCCc--------ee---eeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce-eEEe
Q 015650 192 -L---EQKIFVYNFADL--------KL---LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIM 255 (403)
Q Consensus 192 -~---d~~i~i~d~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~ 255 (403)
+ |+.|++||++++ +. +..+.+|...+..++|+|+...++ ++ ++.||.|++||++++.. ....
T Consensus 112 ~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l-as-~s~Dg~v~iwD~~~~~~~~~~~ 189 (434)
T 2oit_A 112 MSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV-AV-CLADGSIAVLQVTETVKVCATL 189 (434)
T ss_dssp EETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEE-EE-EETTSCEEEEEESSSEEEEEEE
T ss_pred eccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEE-EE-EECCCeEEEEEcCCCcceeecc
Confidence 3 889999998765 22 344556888999999999854433 33 34799999999998643 3455
Q ss_pred ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCC-----CcccEEEEEeCCCCCEEEEEe-CCC----
Q 015650 256 AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA-----DRAEIYSLAFSSNAQWLAVSS-DKG---- 325 (403)
Q Consensus 256 ~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-----~~~~v~~l~~s~d~~~l~s~~-~dg---- 325 (403)
.|...|.+++|+|+|++|++|+.||. |++||++ ++....+..+. |...|.++.|++++.++++.+ .+|
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~-v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGT-VVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSC-EEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCc-EEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 68899999999999999999999999 9999998 66666665421 233899999999988876543 443
Q ss_pred --cEEEEEeecCC
Q 015650 326 --TVHVFNLKVNS 336 (403)
Q Consensus 326 --~v~iwd~~~~~ 336 (403)
.+++|++.+.+
T Consensus 268 ~~~v~i~~l~~~~ 280 (434)
T 2oit_A 268 SPDVVMALLPKKE 280 (434)
T ss_dssp CCEEEEEECCCTT
T ss_pred CCceEEEEeccCC
Confidence 38999998764
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=2.1e-19 Score=176.98 Aligned_cols=245 Identities=11% Similarity=0.030 Sum_probs=166.1
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcce-----eEEEEeeeCCeEEEeeCCCCCC----CCCce
Q 015650 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI-----GVVEMLFRCNILALVGGGPDPQ----YPLNK 157 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~s~~~d~~----~~~~~ 157 (403)
...+++|+|||++|+++ ++.|++|++.+++... .+. ++.. ....+.|+||+..++.+..+.. ...+.
T Consensus 18 ~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSV--FLE-NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEE--EEC-TTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccEECCCCcEEEEc-CCcEEEEECCCCceEE--EEe-chhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 45678999999999987 7779999999887653 333 2321 2234778999887776664300 00145
Q ss_pred EEEEECCCCceeEEEecCCceeEEEEecCceEEE--ecCeEEEEEcCCceeeeEe-eccCC-----------------Cc
Q 015650 158 VMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQI-ETIAN-----------------PK 217 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~-~~~~~-----------------~~ 217 (403)
+.+||+.+++......+...+..++|+|||+.++ .++.|++||+.+++..+.. .++.. ..
T Consensus 94 ~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 94 YDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 6799999998665334778899999999999888 6999999999887654321 12111 11
Q ss_pred eeEEEeeCCCeEEEEeeC-------------------------------C--ccCeEEEEEccC---C---ceeEEee--
Q 015650 218 GLCAVSQGVGSLVLVCPG-------------------------------L--QKGQVRVEHYAS---K---RTKFIMA-- 256 (403)
Q Consensus 218 ~~~~~~~~~~~~~~~~~g-------------------------------~--~d~~i~v~d~~~---~---~~~~~~~-- 256 (403)
..+.|+||++.++++... . ....|++||+.+ + ....+..
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 348899999977665310 0 012688899988 6 5555543
Q ss_pred ----cCCceEEEEEcCCCCEEEEEeC----CCcEEEEEEcCCCc----EE--EEEecCCCcccEE-----EEEeCCCCCE
Q 015650 257 ----HDSRIACFALTQDGQLLATSST----KGTLVRIFNTLDGT----LL--QEVRRGADRAEIY-----SLAFSSNAQW 317 (403)
Q Consensus 257 ----~~~~i~~~~~sp~g~~l~s~~~----dg~~i~iwd~~~~~----~~--~~~~~~~~~~~v~-----~l~~s~d~~~ 317 (403)
|...+..++|+|||++++.... +.. |++||+.+++ +. ..+....+...|. .+.|+|||+.
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~-i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~ 332 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSV-MDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNS 332 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEE-EEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSE
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE-EEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCE
Confidence 7778999999999997765543 235 9999999887 22 1121111344443 7899999998
Q ss_pred EE-EEe-CCC--cEEEEEeecCC
Q 015650 318 LA-VSS-DKG--TVHVFNLKVNS 336 (403)
Q Consensus 318 l~-s~~-~dg--~v~iwd~~~~~ 336 (403)
|+ ..+ .+| .|++|++++++
T Consensus 333 l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 333 FYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp EEEEEECTTSCEEEEEEETTCSS
T ss_pred EEEEEEcCCCceEEEEEECCCCc
Confidence 77 665 344 57777777655
No 164
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=2e-18 Score=158.78 Aligned_cols=239 Identities=14% Similarity=0.107 Sum_probs=164.2
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCC----------eeEEE----EecccCcceeEEEEeeeCCeEEEe----e
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPF----------REIFR----RDFERGGGIGVVEMLFRCNILALV----G 146 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~----------~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~----s 146 (403)
...++.+++++++.++++++.++++||+.... ..... ..+ .+...+.+++|++++..++ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV--PMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEE--CCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccc--cCCCcccEEEEcCCCCEEEEEEec
Confidence 34578899999999999998778999886311 00100 111 2455799999999998888 8
Q ss_pred CCCCCCCCCceEEEEECCCC--------ce---eEEEe-cCCceeEEEEecC-ceEEE---ecCeEEEEEcCCceeeeEe
Q 015650 147 GGPDPQYPLNKVMIWDDHQS--------RC---IGELS-FRSEVRSVKLRRD-RIIVV---LEQKIFVYNFADLKLLHQI 210 (403)
Q Consensus 147 ~~~d~~~~~~~i~iwd~~~~--------~~---~~~~~-~~~~i~~~~~~~~-~~~~~---~d~~i~i~d~~~~~~~~~~ 210 (403)
++.| +.|+|||+.++ +. +..+. |...|.+++|+|+ +.+++ .|++|++||++++..+...
T Consensus 114 gs~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~ 188 (434)
T 2oit_A 114 SEYG-----SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT 188 (434)
T ss_dssp TTTE-----EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE
T ss_pred cCCC-----ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec
Confidence 8888 99999998765 22 23333 7899999999997 66666 4999999999998776666
Q ss_pred eccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeec-------CCceEEEEEcCCCCEEEEEe-CCCc-
Q 015650 211 ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAH-------DSRIACFALTQDGQLLATSS-TKGT- 281 (403)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~-------~~~i~~~~~sp~g~~l~s~~-~dg~- 281 (403)
..|...+..++|+|+++.++. |+.||.|++||.+......+..| ...+.+++|++++.++++.+ .+|.
T Consensus 189 ~~~~~~v~~v~wspdg~~las---gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~ 265 (434)
T 2oit_A 189 LPSTVAVTSVCWSPKGKQLAV---GKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTL 265 (434)
T ss_dssp ECGGGCEEEEEECTTSSCEEE---EETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCS
T ss_pred cCCCCceeEEEEcCCCCEEEE---EcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCcc
Confidence 677888999999999875433 34899999999985444444433 23799999999988875533 3321
Q ss_pred ----EEEEEEcCCCc-----EEEEEecC-----CCcccEEEEEeCCCCCEEEEEe-CCCcEEEEEee
Q 015650 282 ----LVRIFNTLDGT-----LLQEVRRG-----ADRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLK 333 (403)
Q Consensus 282 ----~i~iwd~~~~~-----~~~~~~~~-----~~~~~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~ 333 (403)
.+++|++...+ ....+... ....+-..+.+-++.+++++++ ..+.|.|+...
T Consensus 266 ~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 266 ETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp SSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred CCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 28899997642 11222110 1122222334446777766555 45556666643
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=5.9e-17 Score=140.70 Aligned_cols=239 Identities=13% Similarity=0.214 Sum_probs=174.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecc-----cCcceeEEEEee-eCCeEEEeeCCC-CCCC
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFE-----RGGGIGVVEMLF-RCNILALVGGGP-DPQY 153 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~-----~~~~~~v~~~~~-~~~~~~~~s~~~-d~~~ 153 (403)
.++-..+.+++++++|+++++.. ++.|.+|+.+. +.. ..+. .++...+..+++ .+++.++++... +
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~~~--~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~--- 99 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFK--FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT--- 99 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEE--EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG---
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCC-cEE--EEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC---
Confidence 34566789999999999888876 55599999763 333 2222 123356788888 467766666532 4
Q ss_pred CCceEEEEECCCCceeEEEe--cCCceeEEEEecCceEEEe---cCeEEEEEcCCceeeeEee--ccCCCceeEEEeeCC
Q 015650 154 PLNKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVVL---EQKIFVYNFADLKLLHQIE--TIANPKGLCAVSQGV 226 (403)
Q Consensus 154 ~~~~i~iwd~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~---d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~ 226 (403)
+.|++|| .+++.+..+. +...+..+++.+++.+++. ++.|++||. +++.+..+. .+......+++++++
T Consensus 100 --~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g 175 (286)
T 1q7f_A 100 --HQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQ 175 (286)
T ss_dssp --CEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSS
T ss_pred --CEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCC
Confidence 7999999 6777777775 3457899999999987774 578999995 456666554 223345678888876
Q ss_pred CeEEEEeeCCccCeEEEEEccCCceeEEeec--CCceEEEEEcCCCCEEEEEeCCC-cEEEEEEcCCCcEEEEEecCCCc
Q 015650 227 GSLVLVCPGLQKGQVRVEHYASKRTKFIMAH--DSRIACFALTQDGQLLATSSTKG-TLVRIFNTLDGTLLQEVRRGADR 303 (403)
Q Consensus 227 ~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~--~~~i~~~~~sp~g~~l~s~~~dg-~~i~iwd~~~~~~~~~~~~~~~~ 303 (403)
+ ++++ ...++.|++||.....+..+..+ ...+..++++++|+++++...++ . |.+||. +++.+..+..+...
T Consensus 176 ~-l~v~--~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~-i~~~~~-~g~~~~~~~~~~~~ 250 (286)
T 1q7f_A 176 E-IFIS--DNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-LTIFTQ-DGQLISALESKVKH 250 (286)
T ss_dssp E-EEEE--EGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE-EEEECT-TSCEEEEEEESSCC
T ss_pred C-EEEE--ECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE-EEEECC-CCCEEEEEcccCCC
Confidence 5 4443 23578999999877666555443 35789999999999888887775 8 999994 67777777754333
Q ss_pred ccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 304 AEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 304 ~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
..+.+++++|+|+++++ +.++.|++|++....
T Consensus 251 ~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 251 AQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp SCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred CcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 45889999999987776 579999999987654
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=1.5e-16 Score=141.07 Aligned_cols=241 Identities=10% Similarity=0.061 Sum_probs=175.7
Q ss_pred CCCeEEEEEcCCCCEEEEEcCC-------------------------cEEEEEcCCCeeEEEEecccCcceeEEEEeeeC
Q 015650 85 PPTLLHISFNQDHGCFAAGTDH-------------------------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC 139 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~-------------------------~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 139 (403)
-+.+.+|+++|+|+++++...+ .|.+||.++++.. ..+..++-.....+++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL--QSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE--EEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE--eccCCCccCCceEEEECC
Confidence 4679999999999999888755 4899998766654 333323445778899999
Q ss_pred CeEEEeeCCCCCCCCCceEEEEECCCCc-eeEEEe----------cCCceeEEEEec-CceEEEe----cCeEEEEEcCC
Q 015650 140 NILALVGGGPDPQYPLNKVMIWDDHQSR-CIGELS----------FRSEVRSVKLRR-DRIIVVL----EQKIFVYNFAD 203 (403)
Q Consensus 140 ~~~~~~s~~~d~~~~~~~i~iwd~~~~~-~~~~~~----------~~~~i~~~~~~~-~~~~~~~----d~~i~i~d~~~ 203 (403)
++.++++...+ +.|++|+..... .+..+. +-.....++++| ++.++++ ++.|++|| .+
T Consensus 101 ~g~l~v~d~~~-----~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 101 DGNYWVTDVAL-----HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp TSCEEEEETTT-----TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence 98888887777 899999975442 455552 223578999999 7877774 45899999 56
Q ss_pred ceeeeEeeccC----------CCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc-eeEEe--ecCCceEEEEEcC--
Q 015650 204 LKLLHQIETIA----------NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIM--AHDSRIACFALTQ-- 268 (403)
Q Consensus 204 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-~~~~~--~~~~~i~~~~~sp-- 268 (403)
++.+..+.... .....+++++++..++++- ..++.|++||..+++ +..+. .+...+..++|+|
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d--~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~ 252 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD--RENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGF 252 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE--TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTE
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE--CCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCE
Confidence 77777664322 2256789998866666654 467899999998544 44442 3566788999999
Q ss_pred ----CCCEEEEEeCCCcEEEEEEcCCCcEEEEEec-CCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 269 ----DGQLLATSSTKGTLVRIFNTLDGTLLQEVRR-GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 269 ----~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
+|+.+++...+.. |++||..+++.+..+.. ..+...+.+|+++|+|.++++...++.|++|+++...
T Consensus 253 ~~~~~g~~~v~~~~~~~-v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 253 LFAVNGKPYFGDQEPVQ-GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp EEEEECCCCTTCSCCCC-EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEECS
T ss_pred EEEeCCCEEeccCCCcE-EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCccc
Confidence 3333223333457 99999999999988742 1244678999999999888888899999999998654
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=1.9e-17 Score=150.39 Aligned_cols=245 Identities=13% Similarity=0.075 Sum_probs=162.4
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEee-------------
Q 015650 81 SSSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVG------------- 146 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s------------- 146 (403)
..++...+..+.|+|||+.|+.+..+ .|++|++.+++........ ........+.+++++..++.
T Consensus 76 t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~ 154 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP-AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTD 154 (388)
T ss_dssp CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC-TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS
T ss_pred eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech-hhcccccceeECCCCCeeccccccCcccccccc
Confidence 34455555567899999999988854 5999999988766444443 12122233345777766652
Q ss_pred ---------CCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEec-CceEEE--e-------cCeEEEEEcCCceee
Q 015650 147 ---------GGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-DRIIVV--L-------EQKIFVYNFADLKLL 207 (403)
Q Consensus 147 ---------~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~--~-------d~~i~i~d~~~~~~~ 207 (403)
...+ ..|++||+.+++......+...+..+.|+| |+..++ . ...|+++|+..++.
T Consensus 155 ~~~~~~~~~~~~~-----~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~- 228 (388)
T 3pe7_A 155 WKKFHEFYFTKPC-----CRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM- 228 (388)
T ss_dssp HHHHHHHGGGCCC-----EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-
T ss_pred cchhhhhhccCCc-----ceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-
Confidence 2233 789999999997766666778899999999 998776 2 22788888765543
Q ss_pred eEeeccCC--CceeEEEeeCCCeEEEEeeCCc--cCeEEEEEccCCceeEEeecCCc------eEEEEEcCCCCEEEEE-
Q 015650 208 HQIETIAN--PKGLCAVSQGVGSLVLVCPGLQ--KGQVRVEHYASKRTKFIMAHDSR------IACFALTQDGQLLATS- 276 (403)
Q Consensus 208 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~--d~~i~v~d~~~~~~~~~~~~~~~------i~~~~~sp~g~~l~s~- 276 (403)
..+..+.. .+...+|+|+++.++++..... +..|++||+.+++...+...... ...+.|+|||+.|+..
T Consensus 229 ~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 308 (388)
T 3pe7_A 229 RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDV 308 (388)
T ss_dssp EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC----
T ss_pred EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEe
Confidence 33333332 3566789999998766542211 22499999998776554332221 1223799999988754
Q ss_pred --------eCCCcEEEEEEcCCCcEEEEEecCCCcc-----------cEEEEEeCCCCCEEEEEe-CCCcEEEEEeecCC
Q 015650 277 --------STKGTLVRIFNTLDGTLLQEVRRGADRA-----------EIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVNS 336 (403)
Q Consensus 277 --------~~dg~~i~iwd~~~~~~~~~~~~~~~~~-----------~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~~ 336 (403)
..+.. |++||+.+++.. .+.. +.. .+.+++|+|||++|+..+ .+|...||.++-..
T Consensus 309 ~~~~~~~~~~~~~-i~~~d~~~~~~~-~l~~--~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 309 QDDSGYKIENDPF-LYVFNMKNGTQH-RVAR--HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp --------CCCCE-EEEEETTTTEEE-EEEE--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred eeccccccCCCCE-EEEEeccCCceE-Eecc--ccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 34556 999999887764 3443 223 478899999999888666 57777788776543
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=1.7e-17 Score=148.93 Aligned_cols=230 Identities=12% Similarity=0.098 Sum_probs=156.5
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEEcCCCeeEEEEecccC---cceeEEEEeeeCCeEEEeeCC--CCCCC
Q 015650 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFERG---GGIGVVEMLFRCNILALVGGG--PDPQY 153 (403)
Q Consensus 90 ~i~~s~d~~~l~~~~-----------~~~i~iw~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~s~~--~d~~~ 153 (403)
.++|+|||++|+++. ++.|.+||..+.+......+... +......+.+++++.+++.+. .+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~--- 130 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPA--- 130 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSS---
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCC---
Confidence 899999999998875 23499999987766533332101 123345678899887766553 24
Q ss_pred CCceEEEEECCCCceeEE-EecCCceeEEEEecCc--eEEE--ecCeEEEEEcCC-ceeeeE------eeccCCCceeEE
Q 015650 154 PLNKVMIWDDHQSRCIGE-LSFRSEVRSVKLRRDR--IIVV--LEQKIFVYNFAD-LKLLHQ------IETIANPKGLCA 221 (403)
Q Consensus 154 ~~~~i~iwd~~~~~~~~~-~~~~~~i~~~~~~~~~--~~~~--~d~~i~i~d~~~-~~~~~~------~~~~~~~~~~~~ 221 (403)
+.|.+||+.+++.+.. +..... ..+.+.|++ .+++ .||.+.+|++.. ++.... +.....++ .+.
T Consensus 131 --~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~ 206 (361)
T 2oiz_A 131 --TSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIA 206 (361)
T ss_dssp --EEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSC
T ss_pred --CeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEE
Confidence 7999999999988887 654332 235566765 3333 488888888865 544321 22222221 233
Q ss_pred EeeCCCeEEEEeeCCccCeEEEEEccCCceeEEee---------cC----CceEEEEEcCCCCEEEEEeC----------
Q 015650 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA---------HD----SRIACFALTQDGQLLATSST---------- 278 (403)
Q Consensus 222 ~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~---------~~----~~i~~~~~sp~g~~l~s~~~---------- 278 (403)
.++++..+++.. .++.|.++|+.......... +. .....++|+|++++++.+..
T Consensus 207 ~~~~g~~~~~~~---~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~ 283 (361)
T 2oiz_A 207 PALDKDKAHFVS---YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKF 283 (361)
T ss_dssp CEECSSEEEEEB---TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTC
T ss_pred ecccCCEEEEEe---CCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccC
Confidence 467776665553 56889999987654332211 00 11123789999888877643
Q ss_pred -CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecC
Q 015650 279 -KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (403)
Q Consensus 279 -dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~ 335 (403)
.+. |.+||+.+++.+.++..+ . +.+|+|+|||++|++++. +.|.+||..++
T Consensus 284 ~~~~-v~viD~~t~~~v~~i~~~---~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 284 PAAE-IWVMDTKTKQRVARIPGR---D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp CCSE-EEEEETTTTEEEEEEECT---T-CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred CCce-EEEEECCCCcEEEEEecC---C-eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 246 999999999999999863 3 899999999999998887 99999999998
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.78 E-value=2.1e-16 Score=141.22 Aligned_cols=224 Identities=8% Similarity=0.047 Sum_probs=150.0
Q ss_pred CCeEEEEEcCCCCEEEEEc----------CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 86 PTLLHISFNQDHGCFAAGT----------DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~----------~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
..+...++ ||+.++... +..|.+|++++++... + ..+..+.|+|++..++....+..-..
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---l-----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF---I-----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE---E-----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE---c-----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 45677888 899887652 2238899988765432 2 34667899999876665443200001
Q ss_pred ceEEEEECCCCceeEEEecCCceeEEEEecCceEEE--e-c---------------------------CeEEEEEcCCce
Q 015650 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--L-E---------------------------QKIFVYNFADLK 205 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~-d---------------------------~~i~i~d~~~~~ 205 (403)
..|++|++.+++......+.. +..+.|+||+..++ . + ..|++||+.+++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred ceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 358889998887766655555 99999999998776 2 2 469999998887
Q ss_pred eeeEeeccCCCceeEEEeeCCCeEEEEeeCCcc----C-eEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCC-
Q 015650 206 LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK----G-QVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTK- 279 (403)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d----~-~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~d- 279 (403)
.+..+.. . .+..+.|+|++ ++++.....+ . ...||.++++....+..+ ..+..+ +|||++|+.++.+
T Consensus 164 ~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 164 VIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp EEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECCS
T ss_pred EEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEccc
Confidence 7455554 3 77889999987 4443322111 1 334444436556566555 555554 9999998877754
Q ss_pred -------CcEEEEEEcCCCcEEEEEecCCCcccEEE-EEeCCCCCEEEEEeCCCcEEEEEeecC
Q 015650 280 -------GTLVRIFNTLDGTLLQEVRRGADRAEIYS-LAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (403)
Q Consensus 280 -------g~~i~iwd~~~~~~~~~~~~~~~~~~v~~-l~~s~d~~~l~s~~~dg~v~iwd~~~~ 335 (403)
.. |++|| +++.. .+... +...+.. +.|+ |+ ++++++.++.++|| ++++
T Consensus 237 ~~~~~~~~~-l~~~d--~~~~~-~l~~~-~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 237 KKYMSEHNK-LYIYD--GKEVM-GILDE-VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp SSCCCSSCE-EEEEC--SSCEE-ESSTT-CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS
T ss_pred cCCccccce-EEEEC--CCceE-ecccc-CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC
Confidence 35 88888 56544 33322 4567886 9999 88 88899999999999 9843
No 170
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=2e-18 Score=169.71 Aligned_cols=189 Identities=14% Similarity=0.178 Sum_probs=138.6
Q ss_pred EEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCC----ceeEEEEecCceEEE--e----------cCeEE
Q 015650 134 EMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS----EVRSVKLRRDRIIVV--L----------EQKIF 197 (403)
Q Consensus 134 ~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~--~----------d~~i~ 197 (403)
.+.|++++.+++++. + +.|++||+.+++....+.+.. .+.+++|+|||++++ . ++.|+
T Consensus 20 ~~~~s~dg~~~~~~~-d-----~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWISGQEYLHQSA-D-----NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESSSSEEEEECT-T-----SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECCCCeEEEEcC-C-----CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 668899997776654 6 899999999999877776332 489999999999887 2 47999
Q ss_pred EEEcCCceee--eEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEe--ecCCce------------
Q 015650 198 VYNFADLKLL--HQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM--AHDSRI------------ 261 (403)
Q Consensus 198 i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~--~~~~~i------------ 261 (403)
+||+.+++.+ ..+ ...+..++|+|+++.++++ .++.|++|++.++....+. ++...+
T Consensus 94 ~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~----~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee 166 (719)
T 1z68_A 94 IYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYV----YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEE 166 (719)
T ss_dssp EEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEE----ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHH
T ss_pred EEECCCCccccceec---CcccccceECCCCCEEEEE----ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeee
Confidence 9999988763 222 2457889999999976554 4689999999886655442 222222
Q ss_pred -----EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEEEcCCCcEE--EEEec-
Q 015650 262 -----ACFALTQDGQLLATSSTKG----------------------------------TLVRIFNTLDGTLL--QEVRR- 299 (403)
Q Consensus 262 -----~~~~~sp~g~~l~s~~~dg----------------------------------~~i~iwd~~~~~~~--~~~~~- 299 (403)
.+++|+|||++|++++.|. . |++||+.+++.+ ..+..
T Consensus 167 ~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~-l~~~d~~~~~~~~~~~~~~~ 245 (719)
T 1z68_A 167 MLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVR-IFIIDTTYPAYVGPQEVPVP 245 (719)
T ss_dssp TTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEE-EEEEESSCHHHHCCEECCCC
T ss_pred cccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeE-EEEEECCCCCccceeEccCC
Confidence 4899999999999987652 5 889999887652 12211
Q ss_pred ---CCCcccEEEEEeCCCCCEEEEEeCC----CcEEEEE----eecCC
Q 015650 300 ---GADRAEIYSLAFSSNAQWLAVSSDK----GTVHVFN----LKVNS 336 (403)
Q Consensus 300 ---~~~~~~v~~l~~s~d~~~l~s~~~d----g~v~iwd----~~~~~ 336 (403)
..|...+.+++|+||++++++.... ..|++|| +.+++
T Consensus 246 ~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~ 293 (719)
T 1z68_A 246 AMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD 293 (719)
T ss_dssp HHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE
T ss_pred ccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc
Confidence 1256689999999998877775432 2488888 55554
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=2.8e-17 Score=161.78 Aligned_cols=193 Identities=11% Similarity=0.116 Sum_probs=142.2
Q ss_pred eEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEe-cCC-----ceeEEEEecCceEEE--ec---------
Q 015650 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRS-----EVRSVKLRRDRIIVV--LE--------- 193 (403)
Q Consensus 131 ~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~-----~i~~~~~~~~~~~~~--~d--------- 193 (403)
....+.|++++.+++++ + +.|++||+.+++....+. +.. ....+.|+|||+.++ .+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--E-----NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCEEECSSSEEEEEE--T-----TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred cccccEECCCCcEEEEc--C-----CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 35578999999999886 5 899999999999877776 332 224588999999887 23
Q ss_pred -CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEe--ecCCce---------
Q 015650 194 -QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM--AHDSRI--------- 261 (403)
Q Consensus 194 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~--~~~~~i--------- 261 (403)
+.+++||+.+++... +..+...+...+|+|+++.++++ .++.|++|++.++....+. ++...+
T Consensus 91 ~~~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~----~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 91 TASYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYV----WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVY 165 (740)
T ss_dssp EEEEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEE----ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHH
T ss_pred ceEEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEE----ECCeEEEEECCCCceEEEcCCCCccceecCcccccc
Confidence 678899999987654 55566778899999999976554 4689999999886655543 222222
Q ss_pred --------EEEEEcCCCCEEEEEeCCC------------------------------------cEEEEEEcCC---Cc--
Q 015650 262 --------ACFALTQDGQLLATSSTKG------------------------------------TLVRIFNTLD---GT-- 292 (403)
Q Consensus 262 --------~~~~~sp~g~~l~s~~~dg------------------------------------~~i~iwd~~~---~~-- 292 (403)
..+.|||||++||..+.|. . |++||+.+ ++
T Consensus 166 ~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~-l~v~d~~~~~~~~~~ 244 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK-FFVVNTDSLSSVTNA 244 (740)
T ss_dssp HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE-EEEEETTSCCSSSCC
T ss_pred cchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE-EEEEECCCCCCCCcc
Confidence 3489999999999875321 4 88899988 73
Q ss_pred EEEEEecC----CCcccEEEEEeCCCCCEEEEEeC----CCcEEEEEeecCC
Q 015650 293 LLQEVRRG----ADRAEIYSLAFSSNAQWLAVSSD----KGTVHVFNLKVNS 336 (403)
Q Consensus 293 ~~~~~~~~----~~~~~v~~l~~s~d~~~l~s~~~----dg~v~iwd~~~~~ 336 (403)
....+... .+...+..++|+|||+.++.... +..|++||+.+++
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 245 TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 22334321 15567999999999997765542 3479999999987
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=7.5e-17 Score=156.96 Aligned_cols=243 Identities=12% Similarity=0.011 Sum_probs=164.3
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEE--cCC-cEEEEEcCCCeeEEEEecccCcceeEE---------EEeee--CCeEE
Q 015650 78 ESTSSSPPPTLLHISFNQDHGCFAAG--TDH-GFRIYNCDPFREIFRRDFERGGGIGVV---------EMLFR--CNILA 143 (403)
Q Consensus 78 ~~~~~~~~~~i~~i~~s~d~~~l~~~--~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~ 143 (403)
...+.+|...|..++|++++.+++.. ..+ ...||........ +.+. .+...+. .+.|+ ||+..
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~l~-~~~~~~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAE--ESAL-PAPWNVRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCE--EESS-CTTCCBCCCGGGTCCCCEEEECCSSSSC
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCc--ceeC-CCCccccccccccCCccceeeeecCCCe
Confidence 34566788999999999887777776 333 4889986444333 3343 2333333 44444 77654
Q ss_pred -Ee-eCCCCCCCCCceEEEEECC--C-CceeEEEe------cCCceeEEEEecCceEEE---ec----------CeEEEE
Q 015650 144 -LV-GGGPDPQYPLNKVMIWDDH--Q-SRCIGELS------FRSEVRSVKLRRDRIIVV---LE----------QKIFVY 199 (403)
Q Consensus 144 -~~-s~~~d~~~~~~~i~iwd~~--~-~~~~~~~~------~~~~i~~~~~~~~~~~~~---~d----------~~i~i~ 199 (403)
++ +...+ ..|+++++. . ++. ..+. +...+..++|+|||+.++ .+ ..|++|
T Consensus 93 ~la~~~~~~-----~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 93 LLVFTHFGD-----QRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp EEEEEBTTT-----CCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred EEEEEECCC-----CeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 44 43334 678888876 3 443 3333 345688999999998777 24 489999
Q ss_pred EcCC------ceeeeEee-ccCCCceeEEEeeCCCeEEEEeeCC-----ccCeEEEEEcc-CC---ceeEEe-ecCCceE
Q 015650 200 NFAD------LKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGL-----QKGQVRVEHYA-SK---RTKFIM-AHDSRIA 262 (403)
Q Consensus 200 d~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~-----~d~~i~v~d~~-~~---~~~~~~-~~~~~i~ 262 (403)
|+.+ ++. ..+. .+...+..++|+|+++.++++.... ....|++||+. ++ ....+. .|...+.
T Consensus 167 ~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~ 245 (662)
T 3azo_A 167 PLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA 245 (662)
T ss_dssp ETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE
T ss_pred ECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc
Confidence 9987 543 3444 4445566789999999776654221 12479999998 45 444444 4578899
Q ss_pred EEEEcCCCCEEEEEeCCC--cEEEEEEcCCCcEEEEEecCCCccc--------EEEEEeCCCCCEEEEEeCCCcEEEEEe
Q 015650 263 CFALTQDGQLLATSSTKG--TLVRIFNTLDGTLLQEVRRGADRAE--------IYSLAFSSNAQWLAVSSDKGTVHVFNL 332 (403)
Q Consensus 263 ~~~~sp~g~~l~s~~~dg--~~i~iwd~~~~~~~~~~~~~~~~~~--------v~~l~~s~d~~~l~s~~~dg~v~iwd~ 332 (403)
.+.|+|||++++++..++ . |++||+.+++....... +... +..++|+|++++++++.. +.++||.+
T Consensus 246 ~~~~spdg~l~~~~~~~~~~~-l~~~~~~~~~~~~l~~~--~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 246 QAEWAPDGSLIVATDRTGWWN-LHRVDPATGAATQLCRR--EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp EEEECTTSCEEEEECTTSSCE-EEEECTTTCCEEESSCC--SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred ceEECCCCeEEEEECCCCCeE-EEEEECCCCceeecccc--cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 999999999888887777 5 67777767765443332 2111 567899999999999998 99999976
Q ss_pred ec
Q 015650 333 KV 334 (403)
Q Consensus 333 ~~ 334 (403)
+.
T Consensus 322 d~ 323 (662)
T 3azo_A 322 DP 323 (662)
T ss_dssp ET
T ss_pred EC
Confidence 64
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=6.2e-16 Score=137.33 Aligned_cols=268 Identities=14% Similarity=0.086 Sum_probs=179.4
Q ss_pred CCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC
Q 015650 86 PTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~ 164 (403)
..|.++.|++++..++... ++.++.|. .+.. ..+. .+...+..+.|++++.+++++..+ +.|.+||..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~-~~~~~~~~~~~~~~g~l~~~~~~~-----~~i~~~d~~ 74 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---AEPW--LEIS-KKGLQLEGLNFDRQGQLFLLDVFE-----GNIFKINPE 74 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEE--EEEE-SSCCCEEEEEECTTSCEEEEETTT-----CEEEEECTT
T ss_pred cccceeeecCCccceeEEeecccCcccc---ccee--EEEe-ccCccccCcEECCCCCEEEEECCC-----CEEEEEeCC
Confidence 3467788999887665544 55688883 2222 3333 345566888999998877776666 899999998
Q ss_pred CCceeEEEe-cCCceeEEEEecCceEEEe---c----CeEEEEEcCCceeeeEee--ccCCCceeEEEeeCCCeEEEEee
Q 015650 165 QSRCIGELS-FRSEVRSVKLRRDRIIVVL---E----QKIFVYNFADLKLLHQIE--TIANPKGLCAVSQGVGSLVLVCP 234 (403)
Q Consensus 165 ~~~~~~~~~-~~~~i~~~~~~~~~~~~~~---d----~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 234 (403)
+++...... +...+.++++++++.+++. + +.|++||..+++....+. .....+..++++++++ ++++..
T Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~ 153 (333)
T 2dg1_A 75 TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDF 153 (333)
T ss_dssp TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEEC
T ss_pred CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEec
Confidence 887665543 6678999999999987763 2 489999988766543332 1234566788888764 444431
Q ss_pred CC----ccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEE-eCCCcEEEEEEcCC-CcEEEEE-----ecCCCc
Q 015650 235 GL----QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLD-GTLLQEV-----RRGADR 303 (403)
Q Consensus 235 g~----~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~-~~dg~~i~iwd~~~-~~~~~~~-----~~~~~~ 303 (403)
.. ..+.|..+|..++....+..+...+..++|+|+|++|+.+ +.++. |++||+.+ ++.+..+ ......
T Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-i~~~d~~~~g~~~~~~~~~~~~~~~~~ 232 (333)
T 2dg1_A 154 RGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR-LHRIALEDDGVTIQPFGATIPYYFTGH 232 (333)
T ss_dssp CCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECTTSSSEEEEEEEEEEECCSS
T ss_pred cccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCe-EEEEEecCCCcCcccccceEEEecCCC
Confidence 10 1345666666665655554455568899999999866544 45677 99999863 4332221 110011
Q ss_pred ccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCC--
Q 015650 304 AEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEG-- 381 (403)
Q Consensus 304 ~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 381 (403)
..+..++++++|+++++...++.|.+||.+ ++. +..+..+..
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~-----------------------------------~~~~~~~~~~~ 276 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYP-----------------------------------IGQILIPGRDE 276 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCE-----------------------------------EEEEECTTGGG
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECCC-CCE-----------------------------------EEEEEcCCCcc
Confidence 367889999999988888788999999873 331 112233222
Q ss_pred ----CceEEEeccCCCEEEEEccCC
Q 015650 382 ----SPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 382 ----~~~~~~fs~d~~~l~~~~~dG 402 (403)
.+..++|+||++.|++++.+|
T Consensus 277 g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 277 GHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp TCSCBCCEEEECTTSCEEEEEEECG
T ss_pred ccccCcceEEECCCCCEEEEEeCcc
Confidence 578899999998888777654
No 174
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=8.5e-15 Score=129.60 Aligned_cols=218 Identities=9% Similarity=0.028 Sum_probs=158.3
Q ss_pred CCcEEEEEcCCCeeEEEEeccc-----CcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCcee
Q 015650 105 DHGFRIYNCDPFREIFRRDFER-----GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVR 179 (403)
Q Consensus 105 ~~~i~iw~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~ 179 (403)
+++|.+||.++++.. ..+.. ........+.+..+..+++... + +.|.+||..+++.+.++.......
T Consensus 16 ~~~l~~~d~~t~~~~--~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~-~-----~~v~viD~~t~~~~~~i~~~~~p~ 87 (328)
T 3dsm_A 16 NATLSYYDPATCEVE--NEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN-S-----HVIFAIDINTFKEVGRITGFTSPR 87 (328)
T ss_dssp CBEEEEEETTTTEEE--CSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG-G-----TEEEEEETTTCCEEEEEECCSSEE
T ss_pred CceEEEEECCCCEEh--hhhHhhhcCcccCccceEEEEECCEEEEEEcC-C-----CEEEEEECcccEEEEEcCCCCCCc
Confidence 345999999877643 32210 1123456677777766666654 4 799999999999999888667889
Q ss_pred EEEEecCceEEEe---cCeEEEEEcCCceeeeEeeccCC-----CceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce
Q 015650 180 SVKLRRDRIIVVL---EQKIFVYNFADLKLLHQIETIAN-----PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (403)
Q Consensus 180 ~~~~~~~~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~ 251 (403)
.+++++++++.+. ++.|.+||+.+++....+..... ....+++ +++.++++..+ .++.|.++|..+.++
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~-~~~~v~viD~~t~~~ 164 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWS-YQNRILKIDTETDKV 164 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECT-TCCEEEEEETTTTEE
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCC-CCCEEEEEECCCCeE
Confidence 9999888876663 68999999999988877765430 2345555 55666665422 478999999998665
Q ss_pred eEEeecCCceEEEEEcCCCCEEEEEeCC----------CcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEE
Q 015650 252 KFIMAHDSRIACFALTQDGQLLATSSTK----------GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS 321 (403)
Q Consensus 252 ~~~~~~~~~i~~~~~sp~g~~l~s~~~d----------g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~ 321 (403)
............++++|+|++++++..+ +. |.++|..+++....+... .......++|+||+++|+++
T Consensus 165 ~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~-v~~id~~t~~v~~~~~~~-~g~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 165 VDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS-LYRIDAETFTVEKQFKFK-LGDWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp EEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE-EEEEETTTTEEEEEEECC-TTCCCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCce-EEEEECCCCeEEEEEecC-CCCCceeEEEecCCCEEEEE
Confidence 4433334456789999999977776554 67 999999999988777642 12368999999999999887
Q ss_pred eCCCcEEEEEeecCCC
Q 015650 322 SDKGTVHVFNLKVNSG 337 (403)
Q Consensus 322 ~~dg~v~iwd~~~~~~ 337 (403)
.. .|.+||+.+++.
T Consensus 243 ~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 243 NN--DIWRMPVEADRV 256 (328)
T ss_dssp SS--SEEEEETTCSSC
T ss_pred cc--EEEEEECCCCce
Confidence 54 899999988774
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=2.1e-15 Score=147.83 Aligned_cols=247 Identities=10% Similarity=0.027 Sum_probs=171.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC-C-----cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCC----
Q 015650 83 SPPPTLLHISFNQDHGCFAAGTD-H-----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ---- 152 (403)
Q Consensus 83 ~~~~~i~~i~~s~d~~~l~~~~~-~-----~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~---- 152 (403)
+|...+..++|||||++||.+.+ + .|++||+.+++.... .+. ...+..+.|++|+..|+.+..+..
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~~---~~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLE---RVKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEE---EECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-ccc---CcccceEEEEeCCCEEEEEEECCccccc
Confidence 34456889999999999987752 2 499999988776532 222 223557889998766665544311
Q ss_pred -------CCCceEEEEECCCCcee--EEEe---cCCceeEEEEecCceEEE---e-----cCeEEEEEcCC------ce-
Q 015650 153 -------YPLNKVMIWDDHQSRCI--GELS---FRSEVRSVKLRRDRIIVV---L-----EQKIFVYNFAD------LK- 205 (403)
Q Consensus 153 -------~~~~~i~iwd~~~~~~~--~~~~---~~~~i~~~~~~~~~~~~~---~-----d~~i~i~d~~~------~~- 205 (403)
.....|++|++.+++.. ..+. +...+..+.|+|||++++ . +..|++||+.+ +.
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 00134999999887632 2223 344578999999999877 2 46899999986 43
Q ss_pred eeeEeeccCCCceeEEEeeCCCeEEEEeeC-CccCeEEEEEccCCc---eeEEeecCC--ceEEEEEcCCCCEEEEEeCC
Q 015650 206 LLHQIETIANPKGLCAVSQGVGSLVLVCPG-LQKGQVRVEHYASKR---TKFIMAHDS--RIACFALTQDGQLLATSSTK 279 (403)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~d~~i~v~d~~~~~---~~~~~~~~~--~i~~~~~sp~g~~l~s~~~d 279 (403)
....+..+...... .++++++.+++.+.. ...+.|.+||+.+.. ...+..|.. .+..+.|++++.++++...+
T Consensus 278 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 278 KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 35555555554443 588999888777521 124579999998753 355555544 68889999888888888888
Q ss_pred Cc-EEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEe----CCCcEEEEEeecCC
Q 015650 280 GT-LVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSS----DKGTVHVFNLKVNS 336 (403)
Q Consensus 280 g~-~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~----~dg~v~iwd~~~~~ 336 (403)
+. .|++||+.+++.+..+.. +...+..+.++|+++.|+... ..+.|++||+.+++
T Consensus 357 g~~~l~~~~~~~g~~~~~l~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 VKNTLQLHDLATGALLKIFPL--EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTTCCEEEEECC--CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCCCCEEEecCC--CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 74 167778878887777775 456789999999998766432 45789999998876
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=2e-15 Score=133.81 Aligned_cols=238 Identities=11% Similarity=0.072 Sum_probs=161.4
Q ss_pred eeEEEEeeeCCeEEEeeCCCCCCC-------------------CCceEEEEECCCCceeEEEe--cCCceeEEEEecCce
Q 015650 130 IGVVEMLFRCNILALVGGGPDPQY-------------------PLNKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRI 188 (403)
Q Consensus 130 ~~v~~~~~~~~~~~~~s~~~d~~~-------------------~~~~i~iwd~~~~~~~~~~~--~~~~i~~~~~~~~~~ 188 (403)
..+..+++++++.++++...+... ..+.|.+||..+++.+..+. +-.....+++++++.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 467888888888777766554100 11379999998898877665 345788999999998
Q ss_pred EEEe---cCeEEEEEcCCce-eeeEee---------ccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEe
Q 015650 189 IVVL---EQKIFVYNFADLK-LLHQIE---------TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM 255 (403)
Q Consensus 189 ~~~~---d~~i~i~d~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~ 255 (403)
++++ ++.|++||..... .+..+. .+......+++++++..++++- +..++.|++|+........+.
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d-~~~~~~I~~~~~~g~~~~~~~ 182 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSD-GYCNSRIVQFSPSGKFVTQWG 182 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEE-CSSCCEEEEECTTSCEEEEEC
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEe-CCCCCeEEEEcCCCCEEEEec
Confidence 7774 5799999975432 455542 2222456788888555555553 214789999996655555543
Q ss_pred ec----------CCceEEEEEcCC-CCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEE---
Q 015650 256 AH----------DSRIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS--- 321 (403)
Q Consensus 256 ~~----------~~~i~~~~~sp~-g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~--- 321 (403)
.. -.....++++|+ +.++++...++. |++||..+++.+..+....+...+.+++|+| +..+++.
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-IQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-EEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-EEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 22 234789999998 777777777788 9999998899998887554566889999999 4333333
Q ss_pred ----eCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEE
Q 015650 322 ----SDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVI 397 (403)
Q Consensus 322 ----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~ 397 (403)
..+..|++|++.+++....+. ....+-..+..++|+|||+.+++
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~--------------------------------~~~~~~~~p~~ia~~~dG~lyva 308 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFK--------------------------------PVRKHFDMPHDIVASEDGTVYIG 308 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEEC--------------------------------CSSSCCSSEEEEEECTTSEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEc--------------------------------CCCCccCCeeEEEECCCCCEEEE
Confidence 345589999998877311100 00112245778999999976666
Q ss_pred EccCC
Q 015650 398 LGMDG 402 (403)
Q Consensus 398 ~~~dG 402 (403)
...++
T Consensus 309 d~~~~ 313 (329)
T 3fvz_A 309 DAHTN 313 (329)
T ss_dssp ESSSC
T ss_pred ECCCC
Confidence 65554
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=1.6e-14 Score=125.31 Aligned_cols=193 Identities=13% Similarity=0.138 Sum_probs=142.7
Q ss_pred cceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEec-------CCceeEEEE-ecCceEEE-e---cCe
Q 015650 128 GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF-------RSEVRSVKL-RRDRIIVV-L---EQK 195 (403)
Q Consensus 128 ~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~-------~~~i~~~~~-~~~~~~~~-~---d~~ 195 (403)
+-.....+++++++.++++...+ +.|.+||.. ++.+..+.. ...+..+++ .+++.+++ . ++.
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~-----~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNN-----HRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGG-----TEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred ccCCCceEEECCCCCEEEEECCC-----CEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 44567888999888877776666 899999976 666666642 246789999 47777666 2 679
Q ss_pred EEEEEcCCceeeeEeec-cCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEe--ecCCceEEEEEcCCCCE
Q 015650 196 IFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM--AHDSRIACFALTQDGQL 272 (403)
Q Consensus 196 i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~--~~~~~i~~~~~sp~g~~ 272 (403)
|++|| .+++.+..+.. .......+++.++++ ++++. ..++.|.+||........+. .+...+..++++++|++
T Consensus 102 i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~--~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVE--CKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp EEEEC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEE--TTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEE
T ss_pred EEEEC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEE--CCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCE
Confidence 99999 56777666643 234557788888775 44443 35689999997765555553 34456899999999998
Q ss_pred EEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCC-cEEEEEe
Q 015650 273 LATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG-TVHVFNL 332 (403)
Q Consensus 273 l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg-~v~iwd~ 332 (403)
+++...++. |++||. +++.+..+....+...+..|+++++|+++++...++ .|++|+.
T Consensus 178 ~v~~~~~~~-i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 178 FISDNRAHC-VKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp EEEEGGGTE-EEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred EEEECCCCE-EEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 887777888 999996 566766765422235789999999999888887776 9999984
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.71 E-value=4.4e-14 Score=133.21 Aligned_cols=229 Identities=12% Similarity=0.097 Sum_probs=162.4
Q ss_pred CCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC--CCceeEE
Q 015650 95 QDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH--QSRCIGE 171 (403)
Q Consensus 95 ~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~--~~~~~~~ 171 (403)
+.+.++++.. ++.|.++|..+++.+ ..+. .......+.+++++.+++.++.+ +.|.+||+. +++.+..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~--~~i~--~g~~p~~v~~SpDGr~lyv~~~d-----g~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIK--TVLD--TGYAVHISRLSASGRYLFVIGRD-----GKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEE--EEEE--CSSCEEEEEECTTSCEEEEEETT-----SEEEEEETTSSSCCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEE--EEEe--CCCCccceEECCCCCEEEEEcCC-----CeEEEEECCCCCCcEeEE
Confidence 4444555555 445999999888765 4443 22345588899999887777777 999999995 8888888
Q ss_pred EecCCceeEEEEe----cCceEEE----ecCeEEEEEcCCceeeeEeeccC----------C-CceeEEEeeCCCeEEEE
Q 015650 172 LSFRSEVRSVKLR----RDRIIVV----LEQKIFVYNFADLKLLHQIETIA----------N-PKGLCAVSQGVGSLVLV 232 (403)
Q Consensus 172 ~~~~~~i~~~~~~----~~~~~~~----~d~~i~i~d~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~ 232 (403)
+........++|+ |||++++ .+++|.++|..+.+.++.+.... . .+..+..++++..+++.
T Consensus 236 i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 236 IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred EecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 8865667899999 6998777 47899999999998888775321 1 34566777776655444
Q ss_pred eeCCccCeEEEEEccCCceeE--EeecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEec-CC--CcccE
Q 015650 233 CPGLQKGQVRVEHYASKRTKF--IMAHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRR-GA--DRAEI 306 (403)
Q Consensus 233 ~~g~~d~~i~v~d~~~~~~~~--~~~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~-~~--~~~~v 306 (403)
. ...|.|.++|........ ..........+.|+|+|++|++++. ++. |.++|+.+++.+..+.. +. |.+.-
T Consensus 316 ~--~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~-V~ViD~~t~kl~~~i~vgg~~Phpg~g 392 (567)
T 1qks_A 316 V--KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNK-LVVIDTKEGKLVAIEDTGGQTPHPGRG 392 (567)
T ss_dssp E--TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSSBCCTTC
T ss_pred e--cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCe-EEEEECCCCcEEEEEeccCcCCCCccc
Confidence 3 477999999987643211 1223455778999999999877664 556 99999999998887765 22 32222
Q ss_pred EEEEeCCCCCEE-EEEe-CCCcEEEEEeecCC
Q 015650 307 YSLAFSSNAQWL-AVSS-DKGTVHVFNLKVNS 336 (403)
Q Consensus 307 ~~l~~s~d~~~l-~s~~-~dg~v~iwd~~~~~ 336 (403)
..+ ++|++..+ +++. .++.|.++|.++.+
T Consensus 393 ~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~ 423 (567)
T 1qks_A 393 ANF-VHPTFGPVWATSHMGDDSVALIGTDPEG 423 (567)
T ss_dssp EEE-EETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred eee-ECCCCCcEEEeCCCCCCeEEEecCCCCC
Confidence 222 57875544 4443 56899999998754
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=4.3e-14 Score=123.24 Aligned_cols=234 Identities=9% Similarity=-0.029 Sum_probs=163.7
Q ss_pred ccCCCCCCeEEEEEcCCCC-EEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCce
Q 015650 80 TSSSPPPTLLHISFNQDHG-CFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~-~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (403)
.+..+.....+++|+|+|+ +++++. +++|..|+.++. . ..+. .+...+..+.+++++.++++...+ +.
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~--~~~~-~~~~~~~~l~~~~dg~l~v~~~~~-----~~ 91 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--L--SPEM-HPSHHQNGHCLNKQGHLIACSHGL-----RR 91 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--E--EEEE-SSCSSEEEEEECTTCCEEEEETTT-----TE
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--e--EEEE-CCCCCcceeeECCCCcEEEEecCC-----Ce
Confidence 3444556778999999998 666776 555999998776 2 2332 345668899999998888777665 78
Q ss_pred EEEEECCCCceeEEEe-c----CCceeEEEEecCceEEEec--------------------CeEEEEEcCCceeeeEeec
Q 015650 158 VMIWDDHQSRCIGELS-F----RSEVRSVKLRRDRIIVVLE--------------------QKIFVYNFADLKLLHQIET 212 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~-~----~~~i~~~~~~~~~~~~~~d--------------------~~i~i~d~~~~~~~~~~~~ 212 (403)
|.+||..+++...... . ...+..+++.++|.++++| +.|+.++.. ++ +..+..
T Consensus 92 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~ 169 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIR 169 (296)
T ss_dssp EEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEEC
T ss_pred EEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeec
Confidence 9999998887544332 1 2356789999999988842 356666654 44 333444
Q ss_pred cCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEcc-CCce----eEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEE
Q 015650 213 IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-SKRT----KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (403)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~-~~~~----~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd 287 (403)
.......++++++++.+ ++ ...++.|.+|++. .+.+ ..+..+...+..++++++|+++++. ++. |.+||
T Consensus 170 ~~~~~~gi~~s~dg~~l-v~--~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~-v~~~~ 243 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLL-VS--DTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG-VHVLT 243 (296)
T ss_dssp CCSSEEEEEECTTSCEE-EE--ETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE-EEEEC
T ss_pred CCCCCccEEECCCCCEE-EE--eCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe-EEEEC
Confidence 44455778999998865 33 3467899999986 3433 2223345567789999999976665 677 99999
Q ss_pred cCCCcEEEEEecCCCcccEEEEEe-CCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 288 TLDGTLLQEVRRGADRAEIYSLAF-SSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~v~~l~~-s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
.. ++.+..+.. +.. +.+++| +|+++.|++++.++ +.-++.++.+
T Consensus 244 ~~-g~~~~~~~~--~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 244 PD-GDELGRVLT--PQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp TT-SCEEEEEEC--SSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred CC-CCEEEEEEC--CCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 75 888888875 334 899999 68999998888763 4444554444
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.70 E-value=1.3e-14 Score=131.70 Aligned_cols=231 Identities=10% Similarity=0.001 Sum_probs=151.0
Q ss_pred EEEEcCCCCEEEEEcCC-cEEEEEcCCCeeEEEEecccCcceeEEE-------------------EeeeCCeEEEeeC--
Q 015650 90 HISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVE-------------------MLFRCNILALVGG-- 147 (403)
Q Consensus 90 ~i~~s~d~~~l~~~~~~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~s~-- 147 (403)
.+.|+|||++|+....+ .|.+|++.+++........ ...... ..+++++..++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~---~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVD---EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC---TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc---cccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 37899999999887754 5999999877654333322 111111 2334444333221
Q ss_pred ---CCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEec-CceEEE--ec-------CeEEEEEcCCceeeeEeeccC
Q 015650 148 ---GPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-DRIIVV--LE-------QKIFVYNFADLKLLHQIETIA 214 (403)
Q Consensus 148 ---~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~--~d-------~~i~i~d~~~~~~~~~~~~~~ 214 (403)
..+ ..|++||+.+++......+...+..+.|+| ++..++ .+ ..|++||+..++.. .+..+.
T Consensus 162 ~~~~~~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~ 235 (396)
T 3c5m_A 162 YHTNPT-----CRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHA 235 (396)
T ss_dssp HHTCCC-----EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCC
T ss_pred ccCCCc-----ceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccC
Confidence 233 789999999988766666778899999999 787555 22 46999998765433 232221
Q ss_pred --CCceeEEEeeCCCeEEEEeeCCcc--CeEEEEEccCCceeEEeecCCceEEEEEcC-CCCEEEEEe------------
Q 015650 215 --NPKGLCAVSQGVGSLVLVCPGLQK--GQVRVEHYASKRTKFIMAHDSRIACFALTQ-DGQLLATSS------------ 277 (403)
Q Consensus 215 --~~~~~~~~~~~~~~~~~~~~g~~d--~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~s~~------------ 277 (403)
..+..++|+|+++.++++...... +.|++||+.++....+..... .. +.|+| ||++|++++
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC---------
T ss_pred CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccc
Confidence 235568999999877665421112 459999998877665543332 33 89999 999888754
Q ss_pred ----CCCcEEEEEEcCCCcEEEEEecCCCcc-----------cEEEEEeCCCCCEEEEEe-CCCcEEEEEeecC
Q 015650 278 ----TKGTLVRIFNTLDGTLLQEVRRGADRA-----------EIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVN 335 (403)
Q Consensus 278 ----~dg~~i~iwd~~~~~~~~~~~~~~~~~-----------~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~ 335 (403)
.+.. |++||+.+++.. .+.. +.. .+..+.|+|||+.|+.++ .++...||.++-.
T Consensus 314 ~~~~~~~~-i~~~d~~~~~~~-~l~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~ 383 (396)
T 3c5m_A 314 YNIENDPF-LYVLNTKAKSAQ-KLCK--HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVP 383 (396)
T ss_dssp -CCCCCCE-EEEEETTTTBCC-EEEE--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred cccCCCCc-EEEEecccCceE-EccC--CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEc
Confidence 2356 999999887754 3433 222 256789999999888776 4566666666533
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.70 E-value=2e-15 Score=135.45 Aligned_cols=252 Identities=10% Similarity=0.019 Sum_probs=167.8
Q ss_pred CCCEEEEEc-------CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC----------CCCCCCCceE
Q 015650 96 DHGCFAAGT-------DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG----------PDPQYPLNKV 158 (403)
Q Consensus 96 d~~~l~~~~-------~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~----------~d~~~~~~~i 158 (403)
+++++.+.. ++.|.+||..+++.. ..+. .+... .+.+++++..++.+. .+ +.|
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~--~~i~-~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~-----~~v 83 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFL--GMVP-TAFNG--HVQVSNDGKKIYTMTTYHERITRGKRS-----DVV 83 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEE--EEEE-CCEEE--EEEECTTSSEEEEEEEEETTSSSSCEE-----EEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEE--EEec-CCCCC--ceEECCCCCEEEEEEecccccccCCCC-----CEE
Confidence 555555442 446999998887655 4454 23333 889999987666553 24 679
Q ss_pred EEEECCCCceeEEEe-c------CCceeEEEEecCceEEE-e----cCeEEEEEcCCceeeeE-eeccCCCceeEEEeeC
Q 015650 159 MIWDDHQSRCIGELS-F------RSEVRSVKLRRDRIIVV-L----EQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQG 225 (403)
Q Consensus 159 ~iwd~~~~~~~~~~~-~------~~~i~~~~~~~~~~~~~-~----d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~ 225 (403)
.+||..+++.+.++. . ......++++|||++++ . +++|.+||+.+++.+.. +... ....+.+.|+
T Consensus 84 ~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~ 161 (361)
T 2oiz_A 84 EVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPN 161 (361)
T ss_dssp EEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTT
T ss_pred EEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCC
Confidence 999999999988886 2 24567899999998877 2 46899999999988777 5432 1122556777
Q ss_pred CCeEEEEeeCCccCeEEEEEccC-Ccee-E------EeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcE--EE
Q 015650 226 VGSLVLVCPGLQKGQVRVEHYAS-KRTK-F------IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL--LQ 295 (403)
Q Consensus 226 ~~~~~~~~~g~~d~~i~v~d~~~-~~~~-~------~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~--~~ 295 (403)
+...+++. +.||.+.+|++.. ++.. . +..+..+ ..+.+++++..++..+.++. |.++|+..... +.
T Consensus 162 ~~~~~~~~--~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~-v~v~d~~~~~~~~~~ 237 (361)
T 2oiz_A 162 RPRSFMTI--CGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGN-VYSADFSGDEVKVDG 237 (361)
T ss_dssp SSSEEEEE--ETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSE-EEEEECSSSSCEEEE
T ss_pred CCeeEEEE--CCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCe-EEEEEecCCCceecc
Confidence 65555554 3678898888865 3332 1 1111222 23344677888888888898 99999875542 22
Q ss_pred EEecCC----C----cccEEEEEeCCCCCEEEEEeC-----------CCcEEEEEeecCCCCCCCCCCCCCCCCCccccc
Q 015650 296 EVRRGA----D----RAEIYSLAFSSNAQWLAVSSD-----------KGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSL 356 (403)
Q Consensus 296 ~~~~~~----~----~~~v~~l~~s~d~~~l~s~~~-----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (403)
.+.... . ......++|+||++.++++.. .+.|.+||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~------------------- 298 (361)
T 2oiz_A 238 PWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR------------------- 298 (361)
T ss_dssp EEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE-------------------
T ss_pred cccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE-------------------
Confidence 222100 0 011123789999888877643 34799999988773
Q ss_pred ccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEcc
Q 015650 357 SFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGM 400 (403)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~ 400 (403)
+.++..+. +..++|+|||++|++++.
T Consensus 299 ----------------v~~i~~~~--p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 299 ----------------VARIPGRD--ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp ----------------EEEEECTT--CCEEEEETTTTEEEEECS
T ss_pred ----------------EEEEecCC--eeEEEECCCCCEEEEeCC
Confidence 33445544 889999999999998875
No 182
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=1.2e-15 Score=148.58 Aligned_cols=199 Identities=7% Similarity=-0.020 Sum_probs=141.0
Q ss_pred CcceeEEEEeeeCCeEEEeeC--CCCCCCCCceEEEEECCCCceeEEEe-cCCcee---------EEEEe--cCceE-EE
Q 015650 127 GGGIGVVEMLFRCNILALVGG--GPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVR---------SVKLR--RDRII-VV 191 (403)
Q Consensus 127 ~~~~~v~~~~~~~~~~~~~s~--~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~---------~~~~~--~~~~~-~~ 191 (403)
+|...+..+.++++..+++.. +.+ +...||....+.....+. +...+. ...|+ ||+.. ++
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEA-----GRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTT-----TEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred hcCCccceeEEcCCeEEEEecCcccC-----CcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 466788899999999998887 556 889999865454455554 555555 56666 99887 66
Q ss_pred -e---cCeEEEEEcC--C-ceeeeEeec-----cCCCceeEEEeeCCCeEEEEeeC-------CccCeEEEEEccC----
Q 015650 192 -L---EQKIFVYNFA--D-LKLLHQIET-----IANPKGLCAVSQGVGSLVLVCPG-------LQKGQVRVEHYAS---- 248 (403)
Q Consensus 192 -~---d~~i~i~d~~--~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g-------~~d~~i~v~d~~~---- 248 (403)
. +..|+++++. . ++ ...+.. +...+..++|+|+++.++++... .....|++||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 2 4567777765 2 33 444444 34456789999999976665411 1115899999998
Q ss_pred --CceeEEe-ecCCceEEEEEcCCCCEEEEEeCCC--------cEEEEEEcC-CCc--EEEEEecCCCcccEEEEEeCCC
Q 015650 249 --KRTKFIM-AHDSRIACFALTQDGQLLATSSTKG--------TLVRIFNTL-DGT--LLQEVRRGADRAEIYSLAFSSN 314 (403)
Q Consensus 249 --~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~dg--------~~i~iwd~~-~~~--~~~~~~~~~~~~~v~~l~~s~d 314 (403)
+....+. .+...+..++|+|||++|+.++.++ . |++||+. +++ ....+..+ +...+..+.|+||
T Consensus 175 ~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~-i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spd 252 (662)
T 3azo_A 175 DRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTE-LKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPD 252 (662)
T ss_dssp CGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEE-EEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTT
T ss_pred cCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcE-EEEEEECCCCcccccEEeCCC-CCceEcceEECCC
Confidence 7777777 6677888999999999999877553 5 9999998 561 33334322 4578999999999
Q ss_pred CCEEEEEeCCCcEEEEEee
Q 015650 315 AQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 315 ~~~l~s~~~dg~v~iwd~~ 333 (403)
|++++++..++..+||.++
T Consensus 253 g~l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVD 271 (662)
T ss_dssp SCEEEEECTTSSCEEEEEC
T ss_pred CeEEEEECCCCCeEEEEEE
Confidence 9988888888854444443
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.69 E-value=1.4e-14 Score=126.24 Aligned_cols=224 Identities=10% Similarity=0.062 Sum_probs=158.7
Q ss_pred cceeEEEEeeeCCeE-EEeeCCCCCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEEe---cCeEEEEEcC
Q 015650 128 GGIGVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVVL---EQKIFVYNFA 202 (403)
Q Consensus 128 ~~~~v~~~~~~~~~~-~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~---d~~i~i~d~~ 202 (403)
+......+.|++++. .++++..+ +.|..|+..++ ...+. +...+.++++++++.+++. ++.|.+||..
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~-----~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQ-----NRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred CCccccCCeEeCCCCEEEEEeCCC-----CEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 344567888998875 55555555 89999998877 55565 6677899999999988773 4689999998
Q ss_pred CceeeeEeecc----CCCceeEEEeeCCCeEEEEee--CC-------------ccCeEEEEEccCCceeEEeecCCceEE
Q 015650 203 DLKLLHQIETI----ANPKGLCAVSQGVGSLVLVCP--GL-------------QKGQVRVEHYASKRTKFIMAHDSRIAC 263 (403)
Q Consensus 203 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--g~-------------~d~~i~v~d~~~~~~~~~~~~~~~i~~ 263 (403)
+++........ ...+..++++++++ ++++.. |. ..+.|..++.. +....+..+......
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNG 176 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCcc
Confidence 87654433221 22345688888875 333211 11 12456666655 556666666777899
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEEcC-CCcE---EEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCC
Q 015650 264 FALTQDGQLLATSSTKGTLVRIFNTL-DGTL---LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (403)
Q Consensus 264 ~~~sp~g~~l~s~~~dg~~i~iwd~~-~~~~---~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~ 339 (403)
++|+|+|++|++.+.++. |++||+. +++. ...+ . .+...+.+|+++++|+++++. ++.|.+|+.+ ++.
T Consensus 177 i~~s~dg~~lv~~~~~~~-i~~~~~~~~g~~~~~~~~~-~-~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~-- 248 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNA-THRYCLNARGETEYQGVHF-T-VEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE-- 248 (296)
T ss_dssp EEECTTSCEEEEETTTTE-EEEEEECSSSCEEEEEEEE-C-CSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE--
T ss_pred EEECCCCCEEEEeCCCCe-EEEEEECCCCcCcCCCeEe-e-CCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCE--
Confidence 999999999977777788 9999987 5554 3344 2 244567889999999977666 7889999975 431
Q ss_pred CCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEe-ccCCCEEEEEccCC
Q 015650 340 RSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAF-GHQKNTVVILGMDG 402 (403)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f-s~d~~~l~~~~~dG 402 (403)
+..+..+.. ++.++| +|+++.|++++.+|
T Consensus 249 ---------------------------------~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 249 ---------------------------------LGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp ---------------------------------EEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred ---------------------------------EEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 334556666 889999 68999999988765
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=1.4e-14 Score=141.85 Aligned_cols=240 Identities=7% Similarity=-0.061 Sum_probs=154.1
Q ss_pred CCCCEEEEEc-CCc---EEEEEcC--CCeeEEEE---ecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCC
Q 015650 95 QDHGCFAAGT-DHG---FRIYNCD--PFREIFRR---DFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (403)
Q Consensus 95 ~d~~~l~~~~-~~~---i~iw~~~--~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~ 165 (403)
|+|++++... +.+ -.||..+ .++..... .+..++...+..+.|+||+..++.+..+.......|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8898887654 222 2556553 33322111 2222344578899999998877644332000013899999999
Q ss_pred CceeEEEecCCceeEEEEecCceEEE---ecCe----------------EEEEEcCCceee--eEeec--cCCCceeEEE
Q 015650 166 SRCIGELSFRSEVRSVKLRRDRIIVV---LEQK----------------IFVYNFADLKLL--HQIET--IANPKGLCAV 222 (403)
Q Consensus 166 ~~~~~~~~~~~~i~~~~~~~~~~~~~---~d~~----------------i~i~d~~~~~~~--~~~~~--~~~~~~~~~~ 222 (403)
++.+........+..++|+|||+.++ .++. |++|++.+++.. ..+.. +......+.+
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 98776433333477899999998777 2333 999999886532 22222 2334567899
Q ss_pred eeCCCeEEEEeeCCc--cCeEEEEEccC------C--ceeEEeecCCceEEEEEcCCCCEEEEEeCC----CcEEEEEEc
Q 015650 223 SQGVGSLVLVCPGLQ--KGQVRVEHYAS------K--RTKFIMAHDSRIACFALTQDGQLLATSSTK----GTLVRIFNT 288 (403)
Q Consensus 223 ~~~~~~~~~~~~g~~--d~~i~v~d~~~------~--~~~~~~~~~~~i~~~~~sp~g~~l~s~~~d----g~~i~iwd~ 288 (403)
+++++.+++...... +..|++||+.+ + ....+..+...+.. .|+|+|+.|+..+.. +. |.+||+
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~-l~~~d~ 318 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYR-LINIDF 318 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCE-EEEEET
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCE-EEEEeC
Confidence 999997776653111 57899999986 4 46667777666655 488999988776552 35 999999
Q ss_pred CCCc--EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEE--EeecCC
Q 015650 289 LDGT--LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVF--NLKVNS 336 (403)
Q Consensus 289 ~~~~--~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iw--d~~~~~ 336 (403)
.++. ....+..+.....+..+.|++++.++++...++..+|| ++.+++
T Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 319 TDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp TSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred CCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC
Confidence 8764 22344432222368889999888888888888865555 544444
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.68 E-value=2e-14 Score=128.27 Aligned_cols=226 Identities=14% Similarity=0.100 Sum_probs=149.2
Q ss_pred CCeEEEEEcCCCCEEEEEcC----Cc--EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCC-C------
Q 015650 86 PTLLHISFNQDHGCFAAGTD----HG--FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP-Q------ 152 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~~----~~--i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~-~------ 152 (403)
..+..++|+|||+.|+...+ +. |.+|++.+++.... .. ... +..+.|+|++..++....+. .
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l--~~--~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKI--LE--AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEE--EE--ESE-EEEEEECTTSSEEEEEEECCCC------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEE--Ec--CCC-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 46788999999999988762 22 77778877654422 22 223 88899999886555443110 0
Q ss_pred ---------------CCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE-e--c------C-eEEEEEcCCceee
Q 015650 153 ---------------YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-L--E------Q-KIFVYNFADLKLL 207 (403)
Q Consensus 153 ---------------~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~--d------~-~i~i~d~~~~~~~ 207 (403)
.....|++||+.+++.+..+... .+..+.|+||+ +++ . + . ...+|.+.+++.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~- 210 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE- 210 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-
Confidence 00157999999988774555444 88899999999 555 2 1 2 334444335543
Q ss_pred eEeeccCCCceeEEEeeCCCeEEEEeeCC-----ccCeEEEEEccCCceeEE-eecCCceEE-EEEcCCCCEEEEEeCCC
Q 015650 208 HQIETIANPKGLCAVSQGVGSLVLVCPGL-----QKGQVRVEHYASKRTKFI-MAHDSRIAC-FALTQDGQLLATSSTKG 280 (403)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~d~~i~v~d~~~~~~~~~-~~~~~~i~~-~~~sp~g~~l~s~~~dg 280 (403)
..+..+ .. ...++|+++.++++.... ....|.+|| ++....+ ..+...+.. +.|+ |+ ++++++.++
T Consensus 211 ~~l~~~-~~--~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 211 EKMFEK-VS--FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEEEEE-ES--EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred EEeccC-cc--eeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 333333 33 334489998776654221 135788888 4444443 345677886 9999 88 888999999
Q ss_pred cEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcE-EEEEee
Q 015650 281 TLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTV-HVFNLK 333 (403)
Q Consensus 281 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v-~iwd~~ 333 (403)
. ++|| +.+++....+. +...|.+++|+| .++++++.++.. .||.++
T Consensus 284 ~-~~l~-~~~g~~~~~~~---~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 284 S-VNLY-IWDGEIKPIAK---GRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp E-EEEE-EESSSEEEEEC---SSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred c-EEEE-EcCCceEEEec---CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 8 9999 87676644433 457899999999 677777777665 888887
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.67 E-value=9.5e-13 Score=114.54 Aligned_cols=232 Identities=9% Similarity=-0.013 Sum_probs=161.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEE
Q 015650 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (403)
Q Consensus 83 ~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iw 161 (403)
.+...+.++++.++|+++++.. +++|.+|+.. +... ...+. .....+..+.+.+++..+++...+ +.|..|
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~ 83 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLP-TPDAKVMCLTISSDGEVWFTENAA-----NKIGRI 83 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECS-STTCCEEEEEECTTSCEEEEETTT-----TEEEEE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCC-cccCceeeEEECCCCCEEEeCCCC-----CeEEEE
Confidence 3456799999999999888776 4569999987 4322 22222 244678889998888777776655 789999
Q ss_pred ECCCCceeEEEe---cCCceeEEEEecCceEEEe---cCeEEEEEcCCceeeeE-eeccCCCceeEEEeeCCCeEEEEee
Q 015650 162 DDHQSRCIGELS---FRSEVRSVKLRRDRIIVVL---EQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQGVGSLVLVCP 234 (403)
Q Consensus 162 d~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~---d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (403)
+.. ++ +..+. ....+..+++.+++.+.+. ++.|.+||. +++.... ..........+++.+++ .++++.
T Consensus 84 ~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~- 158 (299)
T 2z2n_A 84 TKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN-ALWFTE- 158 (299)
T ss_dssp CTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-CEEEEE-
T ss_pred CCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC-CEEEEe-
Confidence 975 43 23333 3457889999999887763 568999998 5544322 22223445677777766 344443
Q ss_pred CCccCeEEEEEccCCceeEE--eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeC
Q 015650 235 GLQKGQVRVEHYASKRTKFI--MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFS 312 (403)
Q Consensus 235 g~~d~~i~v~d~~~~~~~~~--~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 312 (403)
..++.|..||. ++....+ ..+...+..++++++|+++++...++. |.+||. +++... +........+.+++++
T Consensus 159 -~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~ 233 (299)
T 2z2n_A 159 -NQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-IGRITT-SGEITE-FKIPTPNARPHAITAG 233 (299)
T ss_dssp -TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEE-EECSSTTCCEEEEEEC
T ss_pred -CCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-EEEECC-CCcEEE-EECCCCCCCceeEEEC
Confidence 34678999998 5555443 233456889999999997776666777 999998 766443 4322234678999999
Q ss_pred CCCCEEEEEeCCCcEEEEEe
Q 015650 313 SNAQWLAVSSDKGTVHVFNL 332 (403)
Q Consensus 313 ~d~~~l~s~~~dg~v~iwd~ 332 (403)
++|+++++...++.|..||.
T Consensus 234 ~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 234 AGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp STTCEEEEETTTTEEEEEET
T ss_pred CCCCEEEeccCCceEEEECC
Confidence 99997777667889999997
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=3.3e-14 Score=122.07 Aligned_cols=235 Identities=9% Similarity=-0.045 Sum_probs=160.8
Q ss_pred CeEEEEEcCCCCEEE-EEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC
Q 015650 87 TLLHISFNQDHGCFA-AGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~-~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~ 164 (403)
...+++++++|++++ +.. +++|.+|+..+.... .+...+...+..+++.+++.++++.. + +.|.+||..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~p~~i~~~~~g~l~v~~~-~-----~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT---VLPFNGLYQPQGLAVDGAGTVYVTDF-N-----NRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E---ECCCCSCCSCCCEEECTTCCEEEEET-T-----TEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc---eEeeCCcCCcceeEECCCCCEEEEcC-C-----CEEEEEeCC
Confidence 678999999999777 434 455999986544322 12112334567788888776666655 5 899999976
Q ss_pred CCceeEEEe--cCCceeEEEEecCceEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccC
Q 015650 165 QSRCIGELS--FRSEVRSVKLRRDRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG 239 (403)
Q Consensus 165 ~~~~~~~~~--~~~~i~~~~~~~~~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 239 (403)
.... ..+. ....+..+++.+++.+++. ++.|.+|+..+................++++++++ ++++. ..++
T Consensus 96 ~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~--~~~~ 171 (270)
T 1rwi_B 96 SNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTD--TDNN 171 (270)
T ss_dssp CSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEE--GGGT
T ss_pred CceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEE--CCCC
Confidence 5543 3333 2357889999999887663 57899998655433222222223456788888775 55543 3467
Q ss_pred eEEEEEccCCceeEEe-ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEE
Q 015650 240 QVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWL 318 (403)
Q Consensus 240 ~i~v~d~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l 318 (403)
.|.+||.......... .+...+.+++++++|.++++...++. |.+||........ +.. .+...+.+++++++|+++
T Consensus 172 ~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-v~~~~~~~~~~~~-~~~-~~~~~p~~i~~~~~g~l~ 248 (270)
T 1rwi_B 172 RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-VVKLLAGSTTSTV-LPF-TGLNTPLAVAVDSDRTVY 248 (270)
T ss_dssp EEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSC-EEEECTTCSCCEE-CCC-CSCSCEEEEEECTTCCEE
T ss_pred EEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCc-EEEEcCCCCccee-ecc-CCCCCceeEEECCCCCEE
Confidence 9999998876554432 23366899999999987777777888 9999986654432 221 123568999999999988
Q ss_pred EEEeCCCcEEEEEeecCCC
Q 015650 319 AVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 319 ~s~~~dg~v~iwd~~~~~~ 337 (403)
++...++.|++|++...+.
T Consensus 249 v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 249 VADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEGGGTEEEEECCCGGGS
T ss_pred EEECCCCEEEEEcCCCccc
Confidence 8888999999999988774
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.66 E-value=6.7e-14 Score=123.82 Aligned_cols=234 Identities=9% Similarity=0.040 Sum_probs=162.6
Q ss_pred CCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC
Q 015650 86 PTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~ 164 (403)
.....+.+. +++++++.. ++.|.+||..+++.. ..+. .......+++++++.++++...+ +.|.+||..
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~--~~i~--~~~~p~~i~~~~~g~lyv~~~~~-----~~v~~iD~~ 113 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEV--GRIT--GFTSPRYIHFLSDEKAYVTQIWD-----YRIFIINPK 113 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEE--EEEE--CCSSEEEEEEEETTEEEEEEBSC-----SEEEEEETT
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEE--EEcC--CCCCCcEEEEeCCCeEEEEECCC-----CeEEEEECC
Confidence 345777774 344555554 556999999888765 3443 33556778887777666666455 899999999
Q ss_pred CCceeEEEecCC------ceeEEEEecCceEEEe----cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEee
Q 015650 165 QSRCIGELSFRS------EVRSVKLRRDRIIVVL----EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (403)
Q Consensus 165 ~~~~~~~~~~~~------~i~~~~~~~~~~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (403)
+++....+.... ....+++ .++.+++. ++.|.++|+.+++.+..+.... ....++++++++ +++++.
T Consensus 114 t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~-l~v~~~ 190 (328)
T 3dsm_A 114 TYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNK-MWTITD 190 (328)
T ss_dssp TTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSE-EEEEBC
T ss_pred CCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCC-EEEEEC
Confidence 999888887433 5667888 44554442 6789999999998888876543 335678888765 555543
Q ss_pred CCc--------cCeEEEEEccCCcee-EEeec-CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcc
Q 015650 235 GLQ--------KGQVRVEHYASKRTK-FIMAH-DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRA 304 (403)
Q Consensus 235 g~~--------d~~i~v~d~~~~~~~-~~~~~-~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~ 304 (403)
+.. .+.|.++|..+.++. .+... ......++|+|++++|+++.. . |.+||..+++............
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~-v~~~d~~t~~~~~~~~~~~~~~ 267 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D-IWRMPVEADRVPVRPFLEFRDT 267 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S-EEEEETTCSSCCSSCSBCCCSS
T ss_pred CCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E-EEEEECCCCceeeeeeecCCCC
Confidence 311 278999999886654 33322 346899999999999988765 7 9999998887632111110135
Q ss_pred cEEEEEeCC-CCCEEEEE----eCCCcEEEEEeecCC
Q 015650 305 EIYSLAFSS-NAQWLAVS----SDKGTVHVFNLKVNS 336 (403)
Q Consensus 305 ~v~~l~~s~-d~~~l~s~----~~dg~v~iwd~~~~~ 336 (403)
....++++| ++.++++. ..++.|.+||.+ ++
T Consensus 268 ~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 268 KYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp CEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred ceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 688999999 55555665 578899999998 66
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.66 E-value=2.1e-14 Score=140.39 Aligned_cols=232 Identities=9% Similarity=0.002 Sum_probs=151.9
Q ss_pred cCCCCEEEEEc-CC---cEEEEEcC--CCeeEEEEe---cccCcceeEEEEeeeCCeEEEe-----eCCCCCCCCCceEE
Q 015650 94 NQDHGCFAAGT-DH---GFRIYNCD--PFREIFRRD---FERGGGIGVVEMLFRCNILALV-----GGGPDPQYPLNKVM 159 (403)
Q Consensus 94 s~d~~~l~~~~-~~---~i~iw~~~--~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~-----s~~~d~~~~~~~i~ 159 (403)
+|+|++++... +. .-.||... .++...... +..+|...+..+.|+||+..++ +++.+ ..|+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~-----~~i~ 150 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADE-----AVLH 150 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSC-----CEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCce-----EEEE
Confidence 37898887665 32 24555543 333222221 1124556788999999998888 66655 7999
Q ss_pred EEECCCCcee-EEEecCCceeEEEEecCceEEE---ecCe-------------EEEEEcCCcee----eeEeeccCCCce
Q 015650 160 IWDDHQSRCI-GELSFRSEVRSVKLRRDRIIVV---LEQK-------------IFVYNFADLKL----LHQIETIANPKG 218 (403)
Q Consensus 160 iwd~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~---~d~~-------------i~i~d~~~~~~----~~~~~~~~~~~~ 218 (403)
+||+.+++.+ ...........++|+|||+.++ .|.. |++|++.+++. +.....+...+.
T Consensus 151 v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~ 230 (695)
T 2bkl_A 151 VIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL 230 (695)
T ss_dssp EEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE
T ss_pred EEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE
Confidence 9999999865 2111111226899999998777 2443 99999988752 222222334567
Q ss_pred eEEEeeCCCeEEEEeeCC-ccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeC----CCcEEEEEEcCCCcE
Q 015650 219 LCAVSQGVGSLVLVCPGL-QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSST----KGTLVRIFNTLDGTL 293 (403)
Q Consensus 219 ~~~~~~~~~~~~~~~~g~-~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~----dg~~i~iwd~~~~~~ 293 (403)
.+.++++++.+++..... ....|.+|+..++....+..+...+....+ ++|. |+..+. ++. |.+||+.+++.
T Consensus 231 ~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~-l~~~d~~~~~~ 307 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQR-VFEVDPAKPAR 307 (695)
T ss_dssp EEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCE-EEEEBTTBCSG
T ss_pred EEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCE-EEEEeCCCCCc
Confidence 889999998766654221 123677777666677777777777777767 6666 544443 467 99999987653
Q ss_pred --EEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeec
Q 015650 294 --LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 294 --~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~ 334 (403)
...+..+.....+..++|+ ++.++++...|+..+||.++.
T Consensus 308 ~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 308 ASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp GGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred cCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC
Confidence 2333332124568889998 777888889999999998873
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.65 E-value=6.7e-13 Score=117.66 Aligned_cols=245 Identities=9% Similarity=-0.004 Sum_probs=163.3
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 81 SSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 81 ~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
+..+...+.+++|+++|++++++. +++|.+|+.++++.... .. .+...+..+.+++++.++++...+. ...+.|.
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~--~~-~~~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~ 115 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP--FV-SHKANPAAIKIHKDGRLFVCYLGDF-KSTGGIF 115 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE--EE-CSSSSEEEEEECTTSCEEEEECTTS-SSCCEEE
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE--ee-CCCCCcceEEECCCCcEEEEeCCCC-CCCceEE
Confidence 445566789999999999888877 45599999877654321 21 2456788999999887666543210 0013799
Q ss_pred EEECCCCceeEEEe---cCCceeEEEEecCceEEEec---------CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCC
Q 015650 160 IWDDHQSRCIGELS---FRSEVRSVKLRRDRIIVVLE---------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG 227 (403)
Q Consensus 160 iwd~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (403)
+||..+++....+. ....+..+++++++.+++.+ +.|+.+|..+++... +.........++++++++
T Consensus 116 ~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEK 194 (333)
T ss_dssp EECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSS
T ss_pred EEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCC
Confidence 99988776553433 34568899999999877732 356667665544333 322333457788999987
Q ss_pred eEEEEeeCCccCeEEEEEccC--CceeEE-----eec--CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 228 SLVLVCPGLQKGQVRVEHYAS--KRTKFI-----MAH--DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 228 ~~~~~~~g~~d~~i~v~d~~~--~~~~~~-----~~~--~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
.++++. ..++.|.+||+.. .....+ ... ...+..++++++|+++++...++. |.+||. +++.+..+.
T Consensus 195 ~l~v~~--~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~-v~~~d~-~g~~~~~~~ 270 (333)
T 2dg1_A 195 VLWVTE--TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGR-VLVFNK-RGYPIGQIL 270 (333)
T ss_dssp EEEEEE--GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTE-EEEECT-TSCEEEEEE
T ss_pred EEEEEe--CCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCE-EEEECC-CCCEEEEEE
Confidence 766654 3568999999963 222211 111 136788999999998887777788 999997 677777776
Q ss_pred cCCC----cccEEEEEeCCCCCEEEEEeCCC----cEEEEEeec
Q 015650 299 RGAD----RAEIYSLAFSSNAQWLAVSSDKG----TVHVFNLKV 334 (403)
Q Consensus 299 ~~~~----~~~v~~l~~s~d~~~l~s~~~dg----~v~iwd~~~ 334 (403)
.+.. ...+.+++|+||++.|+.++.++ .-.||.++.
T Consensus 271 ~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 271 IPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp CTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred cCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 4211 11588999999988777665543 345555543
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=6.4e-14 Score=120.44 Aligned_cols=186 Identities=20% Similarity=0.179 Sum_probs=143.0
Q ss_pred eEEEeeCCCCCCCCCceEEEEECCCCceeEEEe-cC-CceeEEEEecCceEEE-ecCeEEEEEcCCceeeeEeeccC-CC
Q 015650 141 ILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FR-SEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIA-NP 216 (403)
Q Consensus 141 ~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~-~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~-~~ 216 (403)
+..+++++.+ +.|.+||.++|+.+.++. +. ..+.++.+.|+|.+++ .++.|+.||. +++.+..+.... ..
T Consensus 5 ~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGW-----NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CEEEEECTTC-----SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CcEEEeeCCC-----CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 4566777777 999999999999999998 33 4789999999999888 5788999998 899999887642 34
Q ss_pred ceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEee------cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCC
Q 015650 217 KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA------HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (403)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~------~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~ 290 (403)
+..+.+.++++.++... + .++.|..+|...+.+..+.. +......+++.++|++|++...++. |..||..
T Consensus 79 ~~~~~~~~dG~~lv~~~-~-~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~-v~~~d~~- 154 (276)
T 3no2_A 79 MQTARILPDGNALVAWC-G-HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSE-VREIAPN- 154 (276)
T ss_dssp EEEEEECTTSCEEEEEE-S-TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTE-EEEECTT-
T ss_pred ccccEECCCCCEEEEec-C-CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCE-EEEECCC-
Confidence 56677777776433222 2 25677777775555544431 2224556778999999999999999 9999987
Q ss_pred CcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCC
Q 015650 291 GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (403)
Q Consensus 291 ~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~ 339 (403)
|+.+.++... ..+.++.+.++|.+++++..++.|..+|.++++.+.
T Consensus 155 G~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 155 GQLLNSVKLS---GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp SCEEEEEECS---SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred CCEEEEEECC---CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 9999988853 455677888999999998888899999999888543
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=4.2e-15 Score=145.25 Aligned_cols=246 Identities=9% Similarity=-0.042 Sum_probs=162.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEc-----C-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCC---
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGT-----D-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ--- 152 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~-----~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~--- 152 (403)
.+|...+..++|||||++||.+. + ..|++||+++++......+. ......+.|++++..++.+..+..
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~---~~~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE---GGKYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS---CCTTCCCEECTTSSEEEEEECCCCTTS
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC---cccccceEEecCCCEEEEEEecCCCCC
Confidence 34566789999999999998543 2 23999999887643011121 111257889999877776655410
Q ss_pred -----CCCceEEEEECCCCce--eEEEe---cCCceeEEEEecCceEEE---ecC----eEEEEEcCCceeeeEeeccCC
Q 015650 153 -----YPLNKVMIWDDHQSRC--IGELS---FRSEVRSVKLRRDRIIVV---LEQ----KIFVYNFADLKLLHQIETIAN 215 (403)
Q Consensus 153 -----~~~~~i~iwd~~~~~~--~~~~~---~~~~i~~~~~~~~~~~~~---~d~----~i~i~d~~~~~~~~~~~~~~~ 215 (403)
.....|++|++.+++. ...+. +...+..+.|+|||++++ .++ .|++|+..+++ ...+..+..
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~ 272 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVG 272 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSS
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCC
Confidence 0013499999988763 22232 345788999999998777 344 67777765554 344444444
Q ss_pred CceeEEEeeCCCeEEEEee-CCccCeEEEEEccCCc---eeEEeec--CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcC
Q 015650 216 PKGLCAVSQGVGSLVLVCP-GLQKGQVRVEHYASKR---TKFIMAH--DSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (403)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~-g~~d~~i~v~d~~~~~---~~~~~~~--~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~ 289 (403)
......+ ++++ +++.+. +..++.|.+||+.++. ...+..+ ...+..++|+ ++.++++...|+. .+||.+.
T Consensus 273 ~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~ 348 (695)
T 2bkl_A 273 AKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT-SEVRVAT 348 (695)
T ss_dssp CCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE-EEEEEEE
T ss_pred ceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEe
Confidence 4444444 6666 665542 1136889999997754 2444443 4567888888 7778888888887 7777554
Q ss_pred -CCcEEEEEecCCCcccEEEEEeCCCCCEEEEEe----CCCcEEEEEeecCC
Q 015650 290 -DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSS----DKGTVHVFNLKVNS 336 (403)
Q Consensus 290 -~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~----~dg~v~iwd~~~~~ 336 (403)
+++.+..+..+ ....+..+.++|+++.|+... ..++|++||+.+++
T Consensus 349 ~~g~~~~~l~~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 349 LKGKPVRTVQLP-GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp TTCCEEEECCCS-SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCCCeeEEecCC-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 46666666532 246788899999998776333 35789999998876
No 193
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.62 E-value=1.4e-12 Score=113.71 Aligned_cols=229 Identities=13% Similarity=0.098 Sum_probs=153.6
Q ss_pred eeEEEEeeeC-CeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE-ecCeEEEEEcCCceee
Q 015650 130 IGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLL 207 (403)
Q Consensus 130 ~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~ 207 (403)
.-.-...|++ ++.++++.... +.|+.||..+++. ..+.....+.++++++++.+++ .++.|.+||..+++..
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~-----~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPA-----KKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAV 86 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTT-----TEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEE
T ss_pred ccccCCeEECCCCEEEEEECCC-----CEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEECCeEEEEECCCCcEE
Confidence 3445667777 34555555555 8999999887764 4555678899999999998776 6789999999887654
Q ss_pred eEeecc----CCCceeEEEeeCCCeEEEEeeCCc-------cCeEEEEEccC-CceeEEeecCCceEEEEEcCCCCEEEE
Q 015650 208 HQIETI----ANPKGLCAVSQGVGSLVLVCPGLQ-------KGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLAT 275 (403)
Q Consensus 208 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~-------d~~i~v~d~~~-~~~~~~~~~~~~i~~~~~sp~g~~l~s 275 (403)
...... ......+++.++++ +++...+.. .....||.+.. +....+..+......++|+||++.|+.
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEE
Confidence 332221 12245678888776 455432211 12334555443 344444444556789999999997754
Q ss_pred -EeCCCcEEEEEEc--CCCcEE--EEEec-CCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCC
Q 015650 276 -SSTKGTLVRIFNT--LDGTLL--QEVRR-GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDP 349 (403)
Q Consensus 276 -~~~dg~~i~iwd~--~~~~~~--~~~~~-~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 349 (403)
.+.++. |.+||+ .++... +.+.. ..+......++++++|+++++....+.|..||.++++.
T Consensus 166 ~~~~~~~-i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~------------ 232 (297)
T 3g4e_A 166 IDSLSYS-VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR------------ 232 (297)
T ss_dssp EEGGGTE-EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE------------
T ss_pred ecCCCCc-EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE------------
Confidence 455677 999987 455432 22211 11235678999999999888887888999999988773
Q ss_pred CCcccccccccccccceeeeeeeeEEEEEeCCCceEEEec-cCCCEEEEEccC
Q 015650 350 TLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFG-HQKNTVVILGMD 401 (403)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs-~d~~~l~~~~~d 401 (403)
...+..+...+++++|+ ||++.|++++..
T Consensus 233 -----------------------~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 233 -----------------------LQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp -----------------------EEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred -----------------------EEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 23355666678999998 899988777653
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=1.4e-12 Score=114.45 Aligned_cols=238 Identities=10% Similarity=0.048 Sum_probs=162.0
Q ss_pred CCCCeEEEEEcCCCCEEEE-------Ec-CCcEEEEEcCCCeeEEEEecc--cCcceeEEEEeeeCC-eEEEeeCCCCCC
Q 015650 84 PPPTLLHISFNQDHGCFAA-------GT-DHGFRIYNCDPFREIFRRDFE--RGGGIGVVEMLFRCN-ILALVGGGPDPQ 152 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~-------~~-~~~i~iw~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~-~~~~~s~~~d~~ 152 (403)
.-....+++|+++|.++++ +. +++|.+|+..+++..... .. .++...+..+.++++ +..+++...
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~g~l~v~~~~--- 91 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC-KPEVNGYGGIPAGCQCDRDANQLFVADMR--- 91 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE-CCEETTEECCEEEEEECSSSSEEEEEETT---
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEE-ecccCCCCCCCceEEEecCCCcEEEEECC---
Confidence 3345689999999998888 33 666999997766543211 10 023456788999988 776665543
Q ss_pred CCCceEEEEECCCCceeEE-Ee-----cCCceeEEEEecCceEEEec------------------CeEEEEEcCCceeee
Q 015650 153 YPLNKVMIWDDHQSRCIGE-LS-----FRSEVRSVKLRRDRIIVVLE------------------QKIFVYNFADLKLLH 208 (403)
Q Consensus 153 ~~~~~i~iwd~~~~~~~~~-~~-----~~~~i~~~~~~~~~~~~~~d------------------~~i~i~d~~~~~~~~ 208 (403)
+.|.+||.. ++.... .. ....+.++++.+++.+.+.+ +.|..||.. ++...
T Consensus 92 ---~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 92 ---LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp ---TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred ---CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 478999988 665433 22 12358899999999877732 467777765 54433
Q ss_pred EeeccCCCceeEEEe----eCCCeEEEEeeCCccCeEEEEEcc-CCce------eEEeecC-CceEEEEEcCCCCEEEEE
Q 015650 209 QIETIANPKGLCAVS----QGVGSLVLVCPGLQKGQVRVEHYA-SKRT------KFIMAHD-SRIACFALTQDGQLLATS 276 (403)
Q Consensus 209 ~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~d~~i~v~d~~-~~~~------~~~~~~~-~~i~~~~~sp~g~~l~s~ 276 (403)
.. ........++++ ++++.++++. ..++.|.+||.. .+.. ..+..+. ..+..++++++|+++++.
T Consensus 167 ~~-~~~~~~~~i~~~~~~d~dg~~l~v~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 167 VD-TAFQFPNGIAVRHMNDGRPYQLIVAE--TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp EE-EEESSEEEEEEEECTTSCEEEEEEEE--TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred ec-cCCCCcceEEEecccCCCCCEEEEEE--CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEE
Confidence 32 223344678888 7776555553 356899999986 3332 1122232 567889999999988887
Q ss_pred eCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEE-EEeCCCcEEEEEeecCC
Q 015650 277 STKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLA-VSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 277 ~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~-s~~~dg~v~iwd~~~~~ 336 (403)
..++. |.+||..+++.+..+.. +...+.+++|+++|++|+ +...++.|..|++....
T Consensus 244 ~~~~~-i~~~d~~~g~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 244 WGSSH-IEVFGPDGGQPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp ETTTE-EEEECTTCBSCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred cCCCE-EEEEcCCCCcEeEEEeC--CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 77888 99999887877666664 336799999999999555 44566889999987643
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=2.3e-12 Score=110.77 Aligned_cols=211 Identities=12% Similarity=0.045 Sum_probs=153.3
Q ss_pred CCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEec
Q 015650 96 DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (403)
Q Consensus 96 d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~ 174 (403)
.+++|++++ ++.|.+||.++++.+...... ....+..+.+.+++.++++. + +.|..||. +++.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~--~~~~~~~~~~~pdG~ilvs~--~-----~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLE--KGWECNSVAATKAGEILFSY--S-----KGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECC--TTCCCCEEEECTTSCEEEEC--B-----SEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCC--ccCCCcCeEECCCCCEEEeC--C-----CCEEEECC-CCCEEEEEcC
Confidence 457788887 445999999888877544432 22456777888899888854 3 78999998 8999999883
Q ss_pred --CCceeEEEEecCceEEEe----cCeEEEEEcCCceeeeEeeccC------CCceeEEEeeCCCeEEEEeeCCccCeEE
Q 015650 175 --RSEVRSVKLRRDRIIVVL----EQKIFVYNFADLKLLHQIETIA------NPKGLCAVSQGVGSLVLVCPGLQKGQVR 242 (403)
Q Consensus 175 --~~~i~~~~~~~~~~~~~~----d~~i~i~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~~d~~i~ 242 (403)
...+.++.+.++|.+++. ++.|..+|. +++.+..+.... .....+++.++++. +++ ...++.|.
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~--lv~-~~~~~~v~ 149 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNY--LVP-LFATSEVR 149 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCE--EEE-ETTTTEEE
T ss_pred CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCE--EEE-ecCCCEEE
Confidence 357889999999998883 346777774 788777765321 12334566777663 333 24689999
Q ss_pred EEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCC----CcccEEEEEeCCCCCEE
Q 015650 243 VEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA----DRAEIYSLAFSSNAQWL 318 (403)
Q Consensus 243 v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~s~d~~~l 318 (403)
.||...+.+..+.. .....++.+.++|+++++++.++. |..+|..+|+.+.++.... ....+..++..++|.++
T Consensus 150 ~~d~~G~~~w~~~~-~~~~~~~~~~~~g~~~v~~~~~~~-v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~ 227 (276)
T 3no2_A 150 EIAPNGQLLNSVKL-SGTPFSSAFLDNGDCLVACGDAHC-FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY 227 (276)
T ss_dssp EECTTSCEEEEEEC-SSCCCEEEECTTSCEEEECBTTSE-EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEE
T ss_pred EECCCCCEEEEEEC-CCCccceeEcCCCCEEEEeCCCCe-EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEE
Confidence 99998544444443 345667888999999998888888 9999999999999887421 11237889999999988
Q ss_pred EEEe
Q 015650 319 AVSS 322 (403)
Q Consensus 319 ~s~~ 322 (403)
++..
T Consensus 228 v~~~ 231 (276)
T 3no2_A 228 ICNW 231 (276)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8874
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.59 E-value=3.1e-12 Score=114.80 Aligned_cols=233 Identities=11% Similarity=0.006 Sum_probs=158.5
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEEcCCCeeEEEEecc-cC---cceeEEEEeeeCCeEEEeeCCC--CCC
Q 015650 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFE-RG---GGIGVVEMLFRCNILALVGGGP--DPQ 152 (403)
Q Consensus 90 ~i~~s~d~~~l~~~~-----------~~~i~iw~~~~~~~~~~~~~~-~~---~~~~v~~~~~~~~~~~~~s~~~--d~~ 152 (403)
.++|+|||++|.++. ++.|.+||..+.+......+. .. .......+.+++++.+++.+.. +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~-- 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAG-- 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCC--
Confidence 899999999998874 345999999877655332221 00 0123347889999887776542 4
Q ss_pred CCCceEEEEECCCCceeEE-EecCCceeEEEEecCce--EEE--ecCeEEEEEcCCceeeeEee-----ccCCCc-eeEE
Q 015650 153 YPLNKVMIWDDHQSRCIGE-LSFRSEVRSVKLRRDRI--IVV--LEQKIFVYNFADLKLLHQIE-----TIANPK-GLCA 221 (403)
Q Consensus 153 ~~~~~i~iwd~~~~~~~~~-~~~~~~i~~~~~~~~~~--~~~--~d~~i~i~d~~~~~~~~~~~-----~~~~~~-~~~~ 221 (403)
+.|.++| .+++.+.. +..... +.+.+++. ++. .||++.++|. +++...... ....++ ....
T Consensus 148 ---~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~ 219 (373)
T 2mad_H 148 ---PAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPA 219 (373)
T ss_pred ---CeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecce
Confidence 7899999 99998888 664333 44455542 233 5899999999 876663322 111111 1235
Q ss_pred EeeCCCeEEEEeeCCccCeEEEEEccCCceeE---Eee----------cCCceEEEEEcCCCCEEEEEeC----------
Q 015650 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRTKF---IMA----------HDSRIACFALTQDGQLLATSST---------- 278 (403)
Q Consensus 222 ~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~---~~~----------~~~~i~~~~~sp~g~~l~s~~~---------- 278 (403)
+.+++..+++++ ..+.+.+.|+....... +.. .......+.++|+++.|+.+..
T Consensus 220 ~~~~~~~~~~~~---~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~ 296 (373)
T 2mad_H 220 QANKSGRIVWPV---YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAA 296 (373)
T ss_pred eEecCCEEEEEc---CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCC
Confidence 566666666654 45789999987643221 111 1123445789999998887653
Q ss_pred CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCC-EEEEEe-CCCcEEEEEeecCCCCC
Q 015650 279 KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVSS-DKGTVHVFNLKVNSGSA 339 (403)
Q Consensus 279 dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~s~~-~dg~v~iwd~~~~~~~~ 339 (403)
.+. |.++|+.+++.+..+..+ ....+++|+|||+ +|+++. .++.|.+||+.+++.+.
T Consensus 297 ~~~-V~VID~~t~~vv~~i~~g---~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 297 AKE-VTSVTGLVGQTSSQISLG---HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CCe-EEEEECCCCEEEEEEECC---CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 246 999999999999999743 4689999999999 777776 58999999999998643
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=3e-11 Score=105.02 Aligned_cols=231 Identities=9% Similarity=-0.022 Sum_probs=160.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEE
Q 015650 84 PPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd 162 (403)
....+.+|++.++|+++++.. +++|.+|+.. ++.. ...+. .....+..+.+.+++.++++...+ +.|..||
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~-----~~v~~~d 89 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVP-TPDAKVMCLIVSSLGDIWFTENGA-----NKIGKLS 89 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECS-STTCCEEEEEECTTSCEEEEETTT-----TEEEEEC
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECC-CCCCcceeEEECCCCCEEEEecCC-----CeEEEEC
Confidence 346789999999999888775 5569999977 3332 22333 334678888898888777766555 7899999
Q ss_pred CCCCceeEEEe---cCCceeEEEEecCceEEEe---cCeEEEEEcCCceeeeE-eeccCCCceeEEEeeCCCeEEEEeeC
Q 015650 163 DHQSRCIGELS---FRSEVRSVKLRRDRIIVVL---EQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQGVGSLVLVCPG 235 (403)
Q Consensus 163 ~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~---d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g 235 (403)
.. ++. ..+. ....+..+++.+++.+.+. ++.|..||.. ++.... +.........+++.++++ ++++.
T Consensus 90 ~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~-- 163 (300)
T 2qc5_A 90 KK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTE-- 163 (300)
T ss_dssp TT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEE--
T ss_pred CC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEe--
Confidence 77 554 3333 3467889999998887763 5789999987 554322 222234456777877765 55543
Q ss_pred CccCeEEEEEccCCceeEEe--ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCC
Q 015650 236 LQKGQVRVEHYASKRTKFIM--AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (403)
Q Consensus 236 ~~d~~i~v~d~~~~~~~~~~--~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 313 (403)
..++.|..+|. .+....+. .+...+..++++++|+++++....+. |.+||. +++...... ......+.++++++
T Consensus 164 ~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~ 239 (300)
T 2qc5_A 164 NQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-IGRITT-TGEISEYDI-PTPNARPHAITAGK 239 (300)
T ss_dssp TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEEEEC-SSTTCCEEEEEECS
T ss_pred cCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-EEEEcC-CCcEEEEEC-CCCCCCceEEEECC
Confidence 34678999998 44443333 23456889999999987776666777 999997 555543322 12345789999999
Q ss_pred CCCEEEEEeCCCcEEEEEe
Q 015650 314 NAQWLAVSSDKGTVHVFNL 332 (403)
Q Consensus 314 d~~~l~s~~~dg~v~iwd~ 332 (403)
+|+++++...++.|..|+.
T Consensus 240 ~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 240 NSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp TTCEEEEETTTTEEEEECT
T ss_pred CCCEEEeccCCCeEEEECC
Confidence 9997777667789999987
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.59 E-value=1.2e-13 Score=135.91 Aligned_cols=244 Identities=10% Similarity=0.026 Sum_probs=158.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC------cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCC----
Q 015650 84 PPPTLLHISFNQDHGCFAAGTDH------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY---- 153 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~~~------~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~---- 153 (403)
|...+..++|||||++||.+.+. .|++||+++++.... .+ +...+..+.|+++ ..++.+..+...
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~---~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-EL---KWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EE---EEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cC---CCceeccEEEECC-CEEEEEEecCcccccc
Confidence 44468899999999999887632 399999998775421 12 2222346788888 554444333100
Q ss_pred -----CCceEEEEECCCCce--eEEEe---cCCceeEEEEecCceEEE---ec-----CeEEEEEcCCc--eeeeEeecc
Q 015650 154 -----PLNKVMIWDDHQSRC--IGELS---FRSEVRSVKLRRDRIIVV---LE-----QKIFVYNFADL--KLLHQIETI 213 (403)
Q Consensus 154 -----~~~~i~iwd~~~~~~--~~~~~---~~~~i~~~~~~~~~~~~~---~d-----~~i~i~d~~~~--~~~~~~~~~ 213 (403)
....|++|++.+++. ...+. +...+..+.|+|||++++ .+ ..|++||+.++ +....+..+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 013599999987753 22333 223588999999998777 23 38999999876 314455444
Q ss_pred CCCceeEEEeeCCCeEEEEeeC-CccCeEEEEEccCC--ceeEE-eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcC
Q 015650 214 ANPKGLCAVSQGVGSLVLVCPG-LQKGQVRVEHYASK--RTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (403)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~g-~~d~~i~v~d~~~~--~~~~~-~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~ 289 (403)
....... +.++++.+++.+.. ..++.|.+||+.+. ....+ ..+...+..+.++ ++.++++...|+. .+||.+.
T Consensus 316 ~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~ 392 (741)
T 1yr2_A 316 LKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK-SQVLAFD 392 (741)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE-EEEEEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEe
Confidence 4444333 45888888777521 13567999998873 34444 3444556678887 5667778888887 6666543
Q ss_pred -CCcEEEEEecCCCcccEEEEEeCCCCCEEEEE----eCCCcEEEEEeecCC
Q 015650 290 -DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS----SDKGTVHVFNLKVNS 336 (403)
Q Consensus 290 -~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~----~~dg~v~iwd~~~~~ 336 (403)
+++.+..+..+ +...+..+.++|+++.|+.. ...++|++||+.+++
T Consensus 393 ~~g~~~~~l~~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 393 LDGKPAGAVSLP-GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp TTSCEEEECBCS-SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCCceeeccCC-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 46666666532 34678999999999866533 245789999998766
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.59 E-value=4.7e-12 Score=119.43 Aligned_cols=233 Identities=14% Similarity=0.060 Sum_probs=160.0
Q ss_pred CeEEEEEcCCCCEEEEEcC-CcEEEEEcC--CCeeEEEEecccCcceeEEEEeee----CCeEEEee-CCCCCCCCCceE
Q 015650 87 TLLHISFNQDHGCFAAGTD-HGFRIYNCD--PFREIFRRDFERGGGIGVVEMLFR----CNILALVG-GGPDPQYPLNKV 158 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~~-~~i~iw~~~--~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~s-~~~d~~~~~~~i 158 (403)
.+..+.|+|||++++++++ +.|.+||+. +.+.. ..+. .......+.++ +++.+++. ...+ +.|
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~i~--~G~~P~~ia~s~~~~pDGk~l~v~n~~~-----~~v 268 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AEIK--IGSEARSIETSKMEGWEDKYAIAGAYWP-----PQY 268 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EEEE--CCSEEEEEEECCSTTCTTTEEEEEEEET-----TEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EEEe--cCCCCceeEEccccCCCCCEEEEEEccC-----CeE
Confidence 5678999999999888774 459999995 55444 4554 23345788888 57755444 3344 899
Q ss_pred EEEECCCCceeEEEec------------CCceeEEEEecCceEEE----ecCeEEEEEcCCceeee--EeeccCCCceeE
Q 015650 159 MIWDDHQSRCIGELSF------------RSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLH--QIETIANPKGLC 220 (403)
Q Consensus 159 ~iwd~~~~~~~~~~~~------------~~~i~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~--~~~~~~~~~~~~ 220 (403)
.++|..+.+.+..+.. ...+..+..++++..++ .+|.|.++|..+.+.+. .+. .......+
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~ 347 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDG 347 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEE
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCc
Confidence 9999999998887761 12567888888765444 36899999987654322 222 22334567
Q ss_pred EEeeCCCeEEEEeeCCccCeEEEEEccCCceeE-Eee-----cCCceEEEEEcCCCCEE-EEEe-CCCcEEEEEEcCC--
Q 015650 221 AVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKF-IMA-----HDSRIACFALTQDGQLL-ATSS-TKGTLVRIFNTLD-- 290 (403)
Q Consensus 221 ~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~-~~~-----~~~~i~~~~~sp~g~~l-~s~~-~dg~~i~iwd~~~-- 290 (403)
.|+++++.++++. ..++.|.++|+.++++.. +.. |.+.-..+ ++|++..+ +++. .++. |.++|..+
T Consensus 348 ~~~pdgr~~~va~--~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~-Vsvid~~~~~ 423 (567)
T 1qks_A 348 GLDGSHRYFITAA--NARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDS-VALIGTDPEG 423 (567)
T ss_dssp EECTTSCEEEEEE--GGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE-EEEEECCTTT
T ss_pred eECCCCCEEEEEe--CCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCe-EEEecCCCCC
Confidence 8999988766665 357889999999876543 222 32211122 58875554 4443 3577 99999987
Q ss_pred -----CcEEEEEecCCCcccEEEEEeCCCCCEEEEEeC-------CCcEEEEEeecC
Q 015650 291 -----GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSD-------KGTVHVFNLKVN 335 (403)
Q Consensus 291 -----~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~-------dg~v~iwd~~~~ 335 (403)
.+.++++... ...-..|..+|++++|.+... .+.|.++|+.+.
T Consensus 424 ~~~~~~kvv~~i~~~--g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 424 HPDNAWKILDSFPAL--GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp CTTTBTSEEEEEECS--CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CccccCEEEEEEecC--CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 6788888753 123345779999999988763 458999999987
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.57 E-value=4.7e-12 Score=115.23 Aligned_cols=236 Identities=10% Similarity=0.089 Sum_probs=159.4
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEEC
Q 015650 85 PPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~ 163 (403)
-.....|+|+++++++++... +.|++|+.+++..... .. ..... . +++++++..++.++.+. ...|.+|+.
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~--~~-~~~~~-~-ia~~~~g~~l~~~d~~~---~~~I~~~d~ 201 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTV--HP-GFKGG-K-PAVTKDKQRVYSIGWEG---THTVYVYMK 201 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEE--EE-TCCBC-B-CEECTTSSEEEEEBSST---TCEEEEEEG
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEe--ec-cCCCC-c-eeEecCCCcEEEEecCC---CceEEEEEc
Confidence 346889999999997777764 4599999887654422 22 12222 2 77777775555544430 028999998
Q ss_pred CCCceeEEE----e-cCCceeEEEEec-CceEEEe--cCeEEEEEcCCceeeeE----eeccCCCc--eeEEEeeCCCeE
Q 015650 164 HQSRCIGEL----S-FRSEVRSVKLRR-DRIIVVL--EQKIFVYNFADLKLLHQ----IETIANPK--GLCAVSQGVGSL 229 (403)
Q Consensus 164 ~~~~~~~~~----~-~~~~i~~~~~~~-~~~~~~~--d~~i~i~d~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~ 229 (403)
..+.....+ . ....+.+++++| ++.+++. ++.|+.||..++..... ........ ..+++++++..+
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 776554444 2 345678899999 6766663 57899999887653222 11122222 289999977777
Q ss_pred EEEeeCCccCeEEEEEccCCceeEEeecC---------------CceEEEEEcCCCCEEEEEe-CCCcEEEEEEcCCCcE
Q 015650 230 VLVCPGLQKGQVRVEHYASKRTKFIMAHD---------------SRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTL 293 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~~~~~~~~~---------------~~i~~~~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~ 293 (403)
|++- ..++.|+.|+.... ...+.++. .....++++++|+++++-. .++. |+.||+.+++.
T Consensus 282 yv~d--~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-I~~~~~~~G~v 357 (409)
T 3hrp_A 282 YMSD--QNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-LRKLDILDGYV 357 (409)
T ss_dssp EEEE--TTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-EEEEETTTTEE
T ss_pred EEEe--CCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-EEEEECCCCEE
Confidence 7664 45788999987765 43443332 3478999999999777766 6777 99999888875
Q ss_pred EEEEecCC-------------CcccEEEEEeCCCCCEEEEEeCCCcEEEEEee
Q 015650 294 LQEVRRGA-------------DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 294 ~~~~~~~~-------------~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~ 333 (403)
. ++.+.. .-.....|+++++|.++++-..++.|+.++++
T Consensus 358 ~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 358 S-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp E-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred E-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 4 333210 02458899999998888888888899988763
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.55 E-value=2.3e-11 Score=109.13 Aligned_cols=251 Identities=7% Similarity=-0.026 Sum_probs=163.5
Q ss_pred cCCCCEEEEEcC--C----cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC----------CCCCCCCce
Q 015650 94 NQDHGCFAAGTD--H----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG----------PDPQYPLNK 157 (403)
Q Consensus 94 s~d~~~l~~~~~--~----~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~----------~d~~~~~~~ 157 (403)
.|+++++.+... . .|.+||..+++.. ..+.. .... .+.+++++..++.+. .+ +.
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~--~~i~~-g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~-----~~ 98 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSIL--GHVNG-GFLP--NPVAAHSGSEFALASTSFSRIAKGKRT-----DY 98 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEE--EEecC-CCCC--CeEECCCCCEEEEEeccccccccCCCC-----Ce
Confidence 466665554431 1 6799998887754 45542 2222 888999987666553 24 68
Q ss_pred EEEEECCCCceeEEEecC--------CceeEEEEecCceEEE-e----cCeEEEEEcCCceeeeE-eeccCCCceeEEEe
Q 015650 158 VMIWDDHQSRCIGELSFR--------SEVRSVKLRRDRIIVV-L----EQKIFVYNFADLKLLHQ-IETIANPKGLCAVS 223 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~~-~----d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~ 223 (403)
|.+||..+.+.+..+... .....+.|+|||++++ . ++.|.++| .+++.+.. +... .++.+.
T Consensus 99 v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~----~~~~~~ 173 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP----TCYHIH 173 (373)
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC----ceEEEE
Confidence 999999999888877632 3356899999998877 2 36799999 99988777 5432 125566
Q ss_pred eCCCeEEEEeeCCccCeEEEEEccCCcee-EEe-----ecCCc-eEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCc--EE
Q 015650 224 QGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIM-----AHDSR-IACFALTQDGQLLATSSTKGTLVRIFNTLDGT--LL 294 (403)
Q Consensus 224 ~~~~~~~~~~~g~~d~~i~v~d~~~~~~~-~~~-----~~~~~-i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~--~~ 294 (403)
++++..+++. +.||.+.++|. ++... ... ....+ .....+.+++..++..+..+. +.+.|+.+.. .+
T Consensus 174 ~~~~~~~~~~--~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-v~vid~~~~~~~v~ 249 (373)
T 2mad_H 174 PGAPSTFYLL--CAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGK-ILQADISAAGATNK 249 (373)
T ss_pred eCCCceEEEE--cCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCce-EEEEeccCCcceEe
Confidence 7777666654 36899999999 65443 111 11122 123456776665555557778 9999987553 22
Q ss_pred EEEecC--------CCcccEEEEEeCCCCCEEEEEeC----------CCcEEEEEeecCCCCCCCCCCCCCCCCCccccc
Q 015650 295 QEVRRG--------ADRAEIYSLAFSSNAQWLAVSSD----------KGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSL 356 (403)
Q Consensus 295 ~~~~~~--------~~~~~v~~l~~s~d~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (403)
..+... ........+.++||++.|+++.. .+.|.++|+.+.+.
T Consensus 250 ~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v------------------- 310 (373)
T 2mad_H 250 APIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT------------------- 310 (373)
T ss_pred eeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE-------------------
Confidence 333210 01123445789999998877653 35799999988773
Q ss_pred ccccccccceeeeeeeeEEEEEeCCCceEEEeccCCC-EEEEEc
Q 015650 357 SFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKN-TVVILG 399 (403)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~-~l~~~~ 399 (403)
+.++.. .+....++|+|||+ .++++.
T Consensus 311 ----------------v~~i~~-g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 311 ----------------SSQISL-GHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred ----------------EEEEEC-CCCcCeEEECCCCCeEEEEEc
Confidence 223332 23578899999999 677766
No 202
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.55 E-value=1.3e-11 Score=109.05 Aligned_cols=223 Identities=10% Similarity=-0.003 Sum_probs=145.5
Q ss_pred EEEeeeCC-eEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE-ecCeEEEEEcCCceeeeEe
Q 015650 133 VEMLFRCN-ILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQI 210 (403)
Q Consensus 133 ~~~~~~~~-~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~ 210 (403)
....|+++ +..+++...+ +.|..||..+++. ..+.....+.++.+.+++.+++ .+..|++||..+++.....
T Consensus 52 egp~~~~~~~~l~~~d~~~-----~~i~~~d~~~~~~-~~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILE-----RELHELHLASGRK-TVHALPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEETTTTEEEEEEGGG-----TEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEE
T ss_pred cCCeEeCCCCEEEEEECCC-----CEEEEEECCCCcE-EEEECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcEEEEe
Confidence 34567774 4444554445 8899999887654 3455567899999999998777 5667999999887654322
Q ss_pred ecc----CCCceeEEEeeCCCeEEEEeeCC----ccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEe-CCCc
Q 015650 211 ETI----ANPKGLCAVSQGVGSLVLVCPGL----QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS-TKGT 281 (403)
Q Consensus 211 ~~~----~~~~~~~~~~~~~~~~~~~~~g~----~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~-~dg~ 281 (403)
... ...+..++++++++ +++...+. ..+.|..++ .+....+..+......++|+|||+.|+.+. .++.
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 211 12355678888775 44443211 124555566 455544444445678999999999776554 4567
Q ss_pred EEEEEEcC--CC-cE--EEEEec-CCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccc
Q 015650 282 LVRIFNTL--DG-TL--LQEVRR-GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSS 355 (403)
Q Consensus 282 ~i~iwd~~--~~-~~--~~~~~~-~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 355 (403)
|.+||+. ++ +. ...+.. ......+..++++++|.++++...++.|.+|+. +++.
T Consensus 203 -I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~------------------ 262 (326)
T 2ghs_A 203 -LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNH------------------ 262 (326)
T ss_dssp -EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCE------------------
T ss_pred -EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCE------------------
Confidence 9999985 55 31 112211 112345788999999998877767788999987 3431
Q ss_pred cccccccccceeeeeeeeEEEEEeCCCceEEEec-cCCCEEEEEccC
Q 015650 356 LSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFG-HQKNTVVILGMD 401 (403)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs-~d~~~l~~~~~d 401 (403)
+..+..+...+++++|+ +|++.|++++..
T Consensus 263 -----------------~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 263 -----------------IARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp -----------------EEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred -----------------EEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 22345555678899998 898888776543
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.55 E-value=1.1e-12 Score=128.97 Aligned_cols=235 Identities=8% Similarity=-0.011 Sum_probs=148.5
Q ss_pred cCCCCEEEEEc-CCc---EEEEEcC-----CCeeEEEEe---cccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEE
Q 015650 94 NQDHGCFAAGT-DHG---FRIYNCD-----PFREIFRRD---FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (403)
Q Consensus 94 s~d~~~l~~~~-~~~---i~iw~~~-----~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iw 161 (403)
+|+|++++... +.+ -.||..+ .++...... +..++...+..+.|+||+..++.+..+.......|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 48999887665 332 5566553 222221111 22233457788999999877665432100001369999
Q ss_pred ECCCCceeEEEecCCceeEEEEecCceEEE---ecC--------------eEEEEEcCCcee--eeEeeccC--CCceeE
Q 015650 162 DDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQ--------------KIFVYNFADLKL--LHQIETIA--NPKGLC 220 (403)
Q Consensus 162 d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d~--------------~i~i~d~~~~~~--~~~~~~~~--~~~~~~ 220 (403)
|+.+++.+........+..++|+|| ..++ .++ .|++|++.+++. ...+.... ..+..+
T Consensus 195 dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 195 GVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp ETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred ECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 9999987654323333467899999 6666 222 499999977652 22222222 246678
Q ss_pred EEeeCCCeEEEEeeCC--ccCeEEEEEccCC--c-eeEEeecCCceEEEEEcCCCCEEEEEeC----CCcEEEEEEcCCC
Q 015650 221 AVSQGVGSLVLVCPGL--QKGQVRVEHYASK--R-TKFIMAHDSRIACFALTQDGQLLATSST----KGTLVRIFNTLDG 291 (403)
Q Consensus 221 ~~~~~~~~~~~~~~g~--~d~~i~v~d~~~~--~-~~~~~~~~~~i~~~~~sp~g~~l~s~~~----dg~~i~iwd~~~~ 291 (403)
.++++++.+++..... ....|++||+.++ . ...+..+...+.... +|+|+.|+..+. ++. |.+||+.++
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~-l~~~d~~~~ 351 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKK-IVRVDLSGS 351 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCE-EEEEECSSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCE-EEEEeCCCC
Confidence 8999998776665221 2458999999876 5 666766665555553 489998887765 345 999998875
Q ss_pred -cEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEee
Q 015650 292 -TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 292 -~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~ 333 (403)
.....+..+ +...+..+.|+ ++.++++...|+..+||.++
T Consensus 352 ~~~~~~l~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 352 TPRFDTVVPE-SKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SCEEEEEECC-CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred ccccEEEecC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 233444432 44567788887 66778888899998888877
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.54 E-value=4.2e-12 Score=111.38 Aligned_cols=227 Identities=11% Similarity=0.066 Sum_probs=149.1
Q ss_pred eEEEEeeeCCeEEEee-------CCCCCCCCCceEEEEECCCCceeEEEe-----cCCceeEEEEecC-ceEEE-e-cCe
Q 015650 131 GVVEMLFRCNILALVG-------GGPDPQYPLNKVMIWDDHQSRCIGELS-----FRSEVRSVKLRRD-RIIVV-L-EQK 195 (403)
Q Consensus 131 ~v~~~~~~~~~~~~~s-------~~~d~~~~~~~i~iwd~~~~~~~~~~~-----~~~~i~~~~~~~~-~~~~~-~-d~~ 195 (403)
....++|++++..+++ ...+ +.|.+||..+++...... +...+.++++.++ +.+++ . .+.
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~ 93 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPA-----GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLG 93 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEEC-----CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTE
T ss_pred CccCceECCCCCEEEEEeccccCCCCC-----CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCC
Confidence 4467778887776666 4455 889999988877543322 3467889999999 87655 3 458
Q ss_pred EEEEEcCCceeeeE-eec----cCCCceeEEEeeCCCeEEEEeeCCc-------------cCeEEEEEccCCceeEEeec
Q 015650 196 IFVYNFADLKLLHQ-IET----IANPKGLCAVSQGVGSLVLVCPGLQ-------------KGQVRVEHYASKRTKFIMAH 257 (403)
Q Consensus 196 i~i~d~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~g~~-------------d~~i~v~d~~~~~~~~~~~~ 257 (403)
|.+||.. ++.... ... ....+..+++.++++ ++++..+.. .+.|..|+.. +....+..+
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~ 170 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA 170 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC
Confidence 9999987 654332 211 112356788888764 444432210 1567777765 555444444
Q ss_pred CCceEEEEEc----CCCCEEEEE-eCCCcEEEEEEcC-CCcEE--EEEec-CCCc-ccEEEEEeCCCCCEEEEEeCCCcE
Q 015650 258 DSRIACFALT----QDGQLLATS-STKGTLVRIFNTL-DGTLL--QEVRR-GADR-AEIYSLAFSSNAQWLAVSSDKGTV 327 (403)
Q Consensus 258 ~~~i~~~~~s----p~g~~l~s~-~~dg~~i~iwd~~-~~~~~--~~~~~-~~~~-~~v~~l~~s~d~~~l~s~~~dg~v 327 (403)
......++|+ |+|+.|+.+ ..++. |.+||+. +++.. ..+.. ..+. ..+..++++++|+++++...++.|
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~-i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKK-LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTE-EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCe-EEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 5567889999 999766555 45677 9999976 44421 11111 1122 467889999999988888788899
Q ss_pred EEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccC
Q 015650 328 HVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMD 401 (403)
Q Consensus 328 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~d 401 (403)
.+||.++++. ...+..+...+..++|+++|++|++++.+
T Consensus 250 ~~~d~~~g~~-----------------------------------~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 250 EVFGPDGGQP-----------------------------------KMRIRCPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp EEECTTCBSC-----------------------------------SEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEcCCCCcE-----------------------------------eEEEeCCCCCceeEEECCCCCEEEEEeCC
Confidence 9999876652 11233444678889999999977766543
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.53 E-value=1.3e-11 Score=107.41 Aligned_cols=222 Identities=9% Similarity=-0.004 Sum_probs=150.4
Q ss_pred CCCCeEEEEEcCCCCE-EEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEE
Q 015650 84 PPPTLLHISFNQDHGC-FAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~-l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iw 161 (403)
+..-.-+..|++++.. +++.. .+.|..|+.++.... .+. ....+..+.+++++.++++.. +.|.+|
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~---~~~--~~~~~~~i~~~~dG~l~v~~~-------~~l~~~ 78 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ---RVT--MDAPVSSVALRQSGGYVATIG-------TKFCAL 78 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE---EEE--CSSCEEEEEEBTTSSEEEEET-------TEEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE---EEe--CCCceEEEEECCCCCEEEEEC-------CeEEEE
Confidence 3344567899996554 45544 445999998776542 222 335678889999887666653 679999
Q ss_pred ECCCCceeEEEec-----CCceeEEEEecCceEEEec------------CeEEEEEcCC-ceeeeEeeccCCCceeEEEe
Q 015650 162 DDHQSRCIGELSF-----RSEVRSVKLRRDRIIVVLE------------QKIFVYNFAD-LKLLHQIETIANPKGLCAVS 223 (403)
Q Consensus 162 d~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~d------------~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~ 223 (403)
|..+++....... ...+..+++.++|++.+.+ ....+|.+.. ++... +.........++|+
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~s 157 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWS 157 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEEC
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEc
Confidence 9988765433332 2347889999999877732 2234444432 33322 22233344678999
Q ss_pred eCCCeEEEEeeCCccCeEEEEEcc--CCcee---EE---eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEE
Q 015650 224 QGVGSLVLVCPGLQKGQVRVEHYA--SKRTK---FI---MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ 295 (403)
Q Consensus 224 ~~~~~~~~~~~g~~d~~i~v~d~~--~~~~~---~~---~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~ 295 (403)
++++.++++- ..++.|.+|++. ++.+. .+ ..+......++++++|++.++....+. |.+||..+++.+.
T Consensus 158 pdg~~lyv~~--~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~-v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 158 LDHKIFYYID--SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR-VIRLDPVTGKRLQ 234 (297)
T ss_dssp TTSCEEEEEE--GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE-EEEECTTTCCEEE
T ss_pred CCCCEEEEec--CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE-EEEEcCCCceEEE
Confidence 9998777664 457899999974 33321 12 223456789999999987777777777 9999998899998
Q ss_pred EEecCCCcccEEEEEeC-CCCCEEEEEeC
Q 015650 296 EVRRGADRAEIYSLAFS-SNAQWLAVSSD 323 (403)
Q Consensus 296 ~~~~~~~~~~v~~l~~s-~d~~~l~s~~~ 323 (403)
.+.. ....+++++|. ||++.|++++.
T Consensus 235 ~i~~--p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 235 TVKL--PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEC--SSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEC--CCCCceEEEEeCCCCCEEEEEcC
Confidence 8875 33679999998 88887766553
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.53 E-value=9.7e-13 Score=128.32 Aligned_cols=244 Identities=10% Similarity=0.086 Sum_probs=159.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEc-----CCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCC---
Q 015650 82 SSPPPTLLHISFNQDHGCFAAGT-----DHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ--- 152 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~l~~~~-----~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~--- 152 (403)
.+|...+..++|||||++||.+. +.. |++||+++++.... .+. ......+.|+ |+..|+....+..
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~---~~k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLK---DVKFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEE---EEESCCCEEE-TTTEEEEEESSCCC--
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccC---CceeccEEEe-CCCEEEEEEecCcccc
Confidence 44666789999999999998654 222 99999998875422 222 1112355676 5543333322200
Q ss_pred -----CCCceEEEEECCCCce--eEEEec----CCceeEEEEecCceEEE---e----cCeEEEEEcCCce-eeeEeecc
Q 015650 153 -----YPLNKVMIWDDHQSRC--IGELSF----RSEVRSVKLRRDRIIVV---L----EQKIFVYNFADLK-LLHQIETI 213 (403)
Q Consensus 153 -----~~~~~i~iwd~~~~~~--~~~~~~----~~~i~~~~~~~~~~~~~---~----d~~i~i~d~~~~~-~~~~~~~~ 213 (403)
.....|++|++.++.. ...+.. ...+..+.|+||+++++ . .+.|+++|+.++. ....+..+
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 1125699999987653 333332 23467899999999886 1 2589999998763 34455444
Q ss_pred CCCceeEEEeeCCCeEEEEeeC-CccCeEEEEEccCCce---eEEeecCCceEEEEEcCCCCEEEEEeCCC---cEEEEE
Q 015650 214 ANPKGLCAVSQGVGSLVLVCPG-LQKGQVRVEHYASKRT---KFIMAHDSRIACFALTQDGQLLATSSTKG---TLVRIF 286 (403)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~g-~~d~~i~v~d~~~~~~---~~~~~~~~~i~~~~~sp~g~~l~s~~~dg---~~i~iw 286 (403)
....... ++++++.+++.+.. ...+.|.++|+.+... +.+..|...+. .|++++++|+....++ . |++|
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~-l~~~ 355 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATAR-VEQF 355 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEE-EEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeE-EEEE
Confidence 4443333 77888888776521 1247899999987543 56666766655 8999999888766544 5 8899
Q ss_pred EcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCC----CcEEEEEeecCC
Q 015650 287 NTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK----GTVHVFNLKVNS 336 (403)
Q Consensus 287 d~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~d----g~v~iwd~~~~~ 336 (403)
|+.. .....+... ....+..+.++++++.|+....+ +.|+.||+.+++
T Consensus 356 d~~g-~~~~~l~~p-~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 356 DYEG-KRVREVALP-GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp CTTS-CEEEEECCS-SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred ECCC-CeeEEeecC-CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 9874 444555432 34568888899998877665544 789999987765
No 207
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=3.5e-12 Score=113.15 Aligned_cols=232 Identities=13% Similarity=0.037 Sum_probs=152.1
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEEcCCCeeEEEEecccCc----ceeEEEEeeeCCeEEEeeCC--CCCC
Q 015650 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFERGG----GIGVVEMLFRCNILALVGGG--PDPQ 152 (403)
Q Consensus 90 ~i~~s~d~~~l~~~~-----------~~~i~iw~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~s~~--~d~~ 152 (403)
.++++|||++|.++. ++.|.+||..+.+......+..+. ......+.+++++..++.+. .+
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~-- 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA-- 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS--
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC--
Confidence 399999999887664 345999999988766433332100 12334577888877655443 24
Q ss_pred CCCceEEEEECCCCceeEEEecCCceeEEEEecCc--eEEE--ecCeEEEEEcCC-ceeeeEeecc----CCCce-eEEE
Q 015650 153 YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR--IIVV--LEQKIFVYNFAD-LKLLHQIETI----ANPKG-LCAV 222 (403)
Q Consensus 153 ~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~--~d~~i~i~d~~~-~~~~~~~~~~----~~~~~-~~~~ 222 (403)
+.|.++|+.+++.+.++.-.+. ..+.|.+ .++. .||++.+.++.+ ++........ ..++. ...|
T Consensus 160 ---~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~ 233 (386)
T 3sjl_D 160 ---PAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAY 233 (386)
T ss_dssp ---CEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEE
T ss_pred ---CeEEEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccccee
Confidence 7999999999999999874332 1222332 2222 488888888865 5543211111 11111 1344
Q ss_pred e-eCCCeEEEEeeCCccCeEEEEEccCCceeEEee-------------cCCceEEEEEcCCCCEEEEEeC----------
Q 015650 223 S-QGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA-------------HDSRIACFALTQDGQLLATSST---------- 278 (403)
Q Consensus 223 ~-~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~-------------~~~~i~~~~~sp~g~~l~s~~~---------- 278 (403)
. +++ .+++++ .+|.|++.|+.+........ .......++++++++.|+....
T Consensus 234 ~~~dG-~~~~vs---~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 234 SQKAG-RLVWPT---YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp ETTTT-EEEEEB---TTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred EcCCC-cEEEEe---CCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCC
Confidence 4 344 444554 46899999997754332211 1223445788999999887653
Q ss_pred CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCC-EEEEE-eCCCcEEEEEeecCCC
Q 015650 279 KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVS-SDKGTVHVFNLKVNSG 337 (403)
Q Consensus 279 dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~s~-~~dg~v~iwd~~~~~~ 337 (403)
... |.+.|+++++.+..+..+ ..+++|++++|++ +|+++ ..++.|.++|..+++.
T Consensus 310 ~~~-V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 310 SRF-VVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp EEE-EEEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCE-EEEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 135 999999999999999853 4788999999997 66665 4589999999999884
No 208
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.52 E-value=2.5e-12 Score=110.26 Aligned_cols=225 Identities=9% Similarity=-0.013 Sum_probs=147.3
Q ss_pred eEEEEeeeCCeEEEe-eCCCCCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEEe--cCeEEEEEcCCcee
Q 015650 131 GVVEMLFRCNILALV-GGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVVL--EQKIFVYNFADLKL 206 (403)
Q Consensus 131 ~v~~~~~~~~~~~~~-s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~--d~~i~i~d~~~~~~ 206 (403)
....+.+++++.+++ +...+ +.|.+|+..++....... ....+.++++.+++.+++. ++.|++||......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMY-----GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSS-----CEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC
T ss_pred CccceEECCCCCEEEEccCCC-----CcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceE
Confidence 667888888877776 64555 889999976554322111 3356889999999886664 57999999765433
Q ss_pred eeEee-ccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEE-eecCCceEEEEEcCCCCEEEEEeCCCcEEE
Q 015650 207 LHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVR 284 (403)
Q Consensus 207 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~-~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~ 284 (403)
..+. ........+++.++++ ++++. ..++.|.+|+..+...... ......+.+++++++|+++++...++. |.
T Consensus 100 -~~~~~~~~~~p~~i~~~~~g~-l~v~~--~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-i~ 174 (270)
T 1rwi_B 100 -TVLPFDGLNYPEGLAVDTQGA-VYVAD--RGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNR-VV 174 (270)
T ss_dssp -EECCCCSCSSEEEEEECTTCC-EEEEE--GGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTE-EE
T ss_pred -eeeecCCcCCCcceEECCCCC-EEEEE--CCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCE-EE
Confidence 3332 2224456788888765 44443 3567899997655433322 223346789999999997777767778 99
Q ss_pred EEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCccccccccccccc
Q 015650 285 IFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLP 364 (403)
Q Consensus 285 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (403)
+||............ +...+.+|+++++|.++++...++.|.+|+.+...... .
T Consensus 175 ~~~~~~~~~~~~~~~--~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~----------------------- 228 (270)
T 1rwi_B 175 KLEAESNNQVVLPFT--DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-L----------------------- 228 (270)
T ss_dssp EECTTTCCEEECCCS--SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-C-----------------------
T ss_pred EEecCCCceEeeccc--CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-e-----------------------
Confidence 999877665433222 22578999999999877777778899999876543100 0
Q ss_pred ceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 365 KYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
....-..+..++++++|+.+++...++
T Consensus 229 -----------~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 229 -----------PFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp -----------CCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred -----------ccCCCCCceeEEECCCCCEEEEECCCC
Confidence 000013567899999998777666654
No 209
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.51 E-value=1.1e-10 Score=101.26 Aligned_cols=233 Identities=10% Similarity=-0.031 Sum_probs=157.4
Q ss_pred CCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEEC
Q 015650 85 PPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~ 163 (403)
...+.++++.++|.++++.. +++|..|+.+. + .....+. .....+..+.+.+++.++++...+ +.|.+||.
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~d~ 127 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKG-I-IKEYTLP-NPDSAPYGITEGPNGDIWFTEMNG-----NRIGRITD 127 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTS-C-EEEEECS-STTCCEEEEEECTTSCEEEEETTT-----TEEEEECT
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCC-c-EEEEeCC-CcCCCceeeEECCCCCEEEEecCC-----ceEEEECC
Confidence 46789999999999888876 45599998762 2 2122232 244567889998888777766555 78999997
Q ss_pred CCCceeEEEe--cCCceeEEEEecCceEEEe---cCeEEEEEcCCceeeeE-eeccCCCceeEEEeeCCCeEEEEeeCCc
Q 015650 164 HQSRCIGELS--FRSEVRSVKLRRDRIIVVL---EQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (403)
Q Consensus 164 ~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~---d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 237 (403)
+++...... ....+..+++.+++.+.+. ++.|..||. +++.... +.........+++.+++. ++++. ..
T Consensus 128 -~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~--~~ 202 (299)
T 2z2n_A 128 -DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVE--II 202 (299)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEE--TT
T ss_pred -CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEc--cC
Confidence 555433221 3456889999999877763 578999998 6654432 222234456677777754 44443 24
Q ss_pred cCeEEEEEccCCceeEEe--ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCC
Q 015650 238 KGQVRVEHYASKRTKFIM--AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNA 315 (403)
Q Consensus 238 d~~i~v~d~~~~~~~~~~--~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~ 315 (403)
++.|.+||. ++....+. .+...+.+++++++|+++++...++. |.+||. +++ +..+....+...+.++++ ++|
T Consensus 203 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g 277 (299)
T 2z2n_A 203 GNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANK-IGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGE 277 (299)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEEET-TTE-EEEEECSSSSCCEEEEEE-CSS
T ss_pred CceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCce-EEEECC-CCc-eEEEeCCCCCCccceEEe-cCC
Confidence 678999998 55544432 24467899999999997766656777 999998 554 334432223467899999 888
Q ss_pred CEEEEEeCCCcEEEEEeecCC
Q 015650 316 QWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 316 ~~l~s~~~dg~v~iwd~~~~~ 336 (403)
.++++.. .+.|..++.++++
T Consensus 278 ~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 278 TIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp CEEEEET-TTEEEEEEEC---
T ss_pred CEEEEec-CCcEEEEEcCccc
Confidence 8777655 5678888887654
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=3.9e-12 Score=114.90 Aligned_cols=215 Identities=13% Similarity=0.114 Sum_probs=146.0
Q ss_pred CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC----------CCCCCCCceEEEEECCCCceeEEEecC
Q 015650 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG----------PDPQYPLNKVMIWDDHQSRCIGELSFR 175 (403)
Q Consensus 106 ~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~----------~d~~~~~~~i~iwd~~~~~~~~~~~~~ 175 (403)
+.|.++|..+.+.+ ..+..+. .+ .+.+++++..++.+. .+ +.|.++|..+++.+..+...
T Consensus 99 ~~VsVID~~t~~vv--~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~-----~~VsviD~~t~~vv~~I~v~ 168 (426)
T 3c75_H 99 TQQFVIDGSTGRIL--GMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRT-----DYVEVFDPVTFLPIADIELP 168 (426)
T ss_dssp EEEEEEETTTTEEE--EEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEE-----EEEEEECTTTCCEEEEEEET
T ss_pred CeEEEEECCCCEEE--EEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCC-----CEEEEEECCCCcEEEEEECC
Confidence 45999999988776 4443122 23 788888876555443 34 68999999999999888632
Q ss_pred --------CceeEEEEecCceEEE-e----cCeEEEEEcCCceeeeEeeccCC-------CceeEEEeeC----------
Q 015650 176 --------SEVRSVKLRRDRIIVV-L----EQKIFVYNFADLKLLHQIETIAN-------PKGLCAVSQG---------- 225 (403)
Q Consensus 176 --------~~i~~~~~~~~~~~~~-~----d~~i~i~d~~~~~~~~~~~~~~~-------~~~~~~~~~~---------- 225 (403)
.....+.++|||++++ . ++.|.++|+.+++.+..+..... ....+.++++
T Consensus 169 g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~ 248 (426)
T 3c75_H 169 DAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFAD 248 (426)
T ss_dssp TCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCT
T ss_pred CccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCC
Confidence 3467899999998777 2 46899999999988877754210 0111223333
Q ss_pred ---------------------------CCeEEEEeeCCccCeEEEEEccCCceeEEee-------------cCCceEEEE
Q 015650 226 ---------------------------VGSLVLVCPGLQKGQVRVEHYASKRTKFIMA-------------HDSRIACFA 265 (403)
Q Consensus 226 ---------------------------~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~-------------~~~~i~~~~ 265 (403)
+..++++. ..+.+.+.|........+.. .......++
T Consensus 249 ~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s---~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va 325 (426)
T 3c75_H 249 GETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT---YTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTA 325 (426)
T ss_dssp TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB---TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEE
T ss_pred CcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEe---CCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeE
Confidence 33333322 23456666665433222110 011122378
Q ss_pred EcCCCCEEEEEeC----------CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCC-EEEEEe-CCCcEEEEEee
Q 015650 266 LTQDGQLLATSST----------KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVSS-DKGTVHVFNLK 333 (403)
Q Consensus 266 ~sp~g~~l~s~~~----------dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~s~~-~dg~v~iwd~~ 333 (403)
++|++++|+.... .+. |.++|+.+++.+..+..+ ....+|.|+|||+ +|++.. .++.|.++|+.
T Consensus 326 ~s~dg~rlyVa~~~~~~gthk~~s~~-VsVID~~T~kvv~~I~vg---~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 326 YHRQSDRIYLLVDQRDEWKHKAASRF-VVVLNAETGERINKIELG---HEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp EEGGGTEEEEEEEECCTTCTTSCEEE-EEEEETTTCCEEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred EcCCCCEEEEEecccccccccCCCCE-EEEEECCCCeEEEEEECC---CCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 9999988777642 246 999999999999999853 4588999999999 888887 59999999999
Q ss_pred cCCC
Q 015650 334 VNSG 337 (403)
Q Consensus 334 ~~~~ 337 (403)
+.+.
T Consensus 402 t~kv 405 (426)
T 3c75_H 402 TGEE 405 (426)
T ss_dssp TCCE
T ss_pred CCCE
Confidence 9985
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.45 E-value=6.2e-11 Score=103.61 Aligned_cols=224 Identities=11% Similarity=-0.002 Sum_probs=149.5
Q ss_pred CCCCCCeEEEEEcCCCCE-EEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 82 SSPPPTLLHISFNQDHGC-FAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 82 ~~~~~~i~~i~~s~d~~~-l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
...........|+++|+. ++++.. +.|..|+.. ++.. .+. .....+..+.+++++.++++...+ +.|.
T Consensus 41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~---~~~-~~~~~~~gl~~d~dG~l~v~~~~~-----~~v~ 110 (305)
T 3dr2_A 41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVD---VLL-DATAFTNGNAVDAQQRLVHCEHGR-----RAIT 110 (305)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEE---EEE-ESCSCEEEEEECTTSCEEEEETTT-----TEEE
T ss_pred ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEE---EEe-CCCCccceeeECCCCCEEEEECCC-----CEEE
Confidence 334455678999999984 455554 459999874 3321 222 234567788999988877776555 7899
Q ss_pred EEECCCCceeEEEec-----CCceeEEEEecCceEEEec--------------------CeEEEEEcCCceeeeEeeccC
Q 015650 160 IWDDHQSRCIGELSF-----RSEVRSVKLRRDRIIVVLE--------------------QKIFVYNFADLKLLHQIETIA 214 (403)
Q Consensus 160 iwd~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~d--------------------~~i~i~d~~~~~~~~~~~~~~ 214 (403)
+|+.. ++....... ...+..+++.++|.+.++| +.|+.||..+++..... ..
T Consensus 111 ~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~ 187 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DL 187 (305)
T ss_dssp EECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EE
T ss_pred EECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cC
Confidence 99975 553322221 2346789999999988853 46888887666544333 33
Q ss_pred CCceeEEEeeCCCeEEEEeeCC---ccCeEEEEEccCCcee---EE-eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEE
Q 015650 215 NPKGLCAVSQGVGSLVLVCPGL---QKGQVRVEHYASKRTK---FI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (403)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~g~---~d~~i~v~d~~~~~~~---~~-~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd 287 (403)
.....++++++++.++++.... ..+.|.+|++....+. .+ .........++++++|++. +++.+ . |.+||
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-g-v~~~~ 264 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-G-VCVFD 264 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-E-EEEEC
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-c-EEEEC
Confidence 3446789999998877764221 0368999998764321 11 1123445678999999954 44444 5 99999
Q ss_pred cCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCC
Q 015650 288 TLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG 325 (403)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg 325 (403)
. +++.+..+..+ ..+.+++|+++++.|..++.++
T Consensus 265 ~-~g~~~~~~~~~---~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 265 S-DGQLLGHIPTP---GTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp T-TSCEEEEEECS---SCCCEEEECTTSCEEEEEETTE
T ss_pred C-CCCEEEEEECC---CceeEEEEeCCCCEEEEEcCCe
Confidence 7 68888888743 3588999999999888887664
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=2.7e-10 Score=100.53 Aligned_cols=217 Identities=10% Similarity=0.058 Sum_probs=147.2
Q ss_pred CeEEEEEcCCCC-EEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC
Q 015650 87 TLLHISFNQDHG-CFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (403)
Q Consensus 87 ~i~~i~~s~d~~-~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~ 164 (403)
-..+..|+|++. +++++. +++|..|+.++++.. .+. ....+.++.+.+++.++++.. ..|.+||..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~---~~~--~~~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~ 117 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT---VHA--LPFMGSALAKISDSKQLIASD-------DGLFLRDTA 117 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE---EEE--CSSCEEEEEEEETTEEEEEET-------TEEEEEETT
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE---EEE--CCCcceEEEEeCCCeEEEEEC-------CCEEEEECC
Confidence 456789999855 445554 455999998776533 222 234688888999888777653 459999988
Q ss_pred CCceeEEEec-----CCceeEEEEecCceEEEec---------CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEE
Q 015650 165 QSRCIGELSF-----RSEVRSVKLRRDRIIVVLE---------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (403)
Q Consensus 165 ~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (403)
+++....... ...+.+++++++|.+++.+ +.|+.++ +++... +.........++++++++.++
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGY 194 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEE
Confidence 8875433322 2357899999999877732 3566666 454332 322233456789999988776
Q ss_pred EEeeCCccCeEEEEEcc--CC-ce---eEEe---ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCC
Q 015650 231 LVCPGLQKGQVRVEHYA--SK-RT---KFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA 301 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~--~~-~~---~~~~---~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~ 301 (403)
++. ..++.|.+||+. ++ .+ ..+. ........++++++|++.++...++. |.+||. +++.+..+..
T Consensus 195 v~~--~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~-v~~~d~-~g~~~~~i~~-- 268 (326)
T 2ghs_A 195 FVD--TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA-VDRYDT-DGNHIARYEV-- 268 (326)
T ss_dssp EEE--TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-EEEECT-TCCEEEEEEC--
T ss_pred EEE--CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-EEEECC-CCCEEEEEEC--
Confidence 654 356899999986 44 21 2221 23455788999999987777666677 999997 6777777764
Q ss_pred CcccEEEEEeC-CCCCEEEEEeCC
Q 015650 302 DRAEIYSLAFS-SNAQWLAVSSDK 324 (403)
Q Consensus 302 ~~~~v~~l~~s-~d~~~l~s~~~d 324 (403)
....+++++|+ ++++.|++++..
T Consensus 269 ~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 269 PGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp SCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCCcEEEEEecCCCCEEEEEecC
Confidence 33579999998 898877655533
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.45 E-value=1.4e-11 Score=109.36 Aligned_cols=255 Identities=11% Similarity=0.093 Sum_probs=163.5
Q ss_pred EEcCCCCEEEEEcC------CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC----------CCCCCCC
Q 015650 92 SFNQDHGCFAAGTD------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG----------PDPQYPL 155 (403)
Q Consensus 92 ~~s~d~~~l~~~~~------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~----------~d~~~~~ 155 (403)
...|+++.+.+... +.|.++|..+.+.+ ..+..+.. + .+.+++++..++.+. .+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~--~~I~vG~~-P--~va~spDG~~lyVan~~~~r~~~G~~~----- 108 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVI--GMIDGGFL-P--NPVVADDGSFIAHASTVFSRIARGERT----- 108 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEE--EEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEE-----
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEE--EEEECCCC-C--cEEECCCCCEEEEEcccccccccCCCC-----
Confidence 45688888777653 34999999888766 44442222 3 388888877655443 24
Q ss_pred ceEEEEECCCCceeEEEecC--------CceeEEEEecCceEEE-e----cCeEEEEEcCCceeeeEeeccCCCceeEEE
Q 015650 156 NKVMIWDDHQSRCIGELSFR--------SEVRSVKLRRDRIIVV-L----EQKIFVYNFADLKLLHQIETIANPKGLCAV 222 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~~-~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 222 (403)
+.|.+||..+++.+..+.-. .....+.++|||++++ . ++.|.++|+.+++.+.++.... +..+
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~~~~ 184 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----CYHI 184 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----ccee
Confidence 68999999999999988722 2567899999998766 2 4789999999999998886422 1223
Q ss_pred eeCCCeEEEEeeCCccCeEEEEEccC-CceeEEe-ec----CCceE-EEEEc-CCCCEEEEEeCCCcEEEEEEcCCCc--
Q 015650 223 SQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIM-AH----DSRIA-CFALT-QDGQLLATSSTKGTLVRIFNTLDGT-- 292 (403)
Q Consensus 223 ~~~~~~~~~~~~g~~d~~i~v~d~~~-~~~~~~~-~~----~~~i~-~~~~s-p~g~~l~s~~~dg~~i~iwd~~~~~-- 292 (403)
.|.+...+++. +.||.+.+.++.. +++.... .+ ...+. ...|. ++|++++ .+.+|. |++.|+.+..
T Consensus 185 ~P~g~~~~~~~--~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~-V~v~d~~~~~~~ 260 (386)
T 3sjl_D 185 FPTAPDTFFMH--CRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGK-IHQIDLSSGDAK 260 (386)
T ss_dssp EEEETTEEEEE--ETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSE-EEEEECTTSSCE
T ss_pred ecCCCceeEEE--CCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCE-EEEEECCCCcce
Confidence 34444334333 3578888888765 4432111 11 12222 24564 6776555 566788 9999987654
Q ss_pred EEEEEe--------cCCCcccEEEEEeCCCCCEEEEEeC----------CCcEEEEEeecCCCCCCCCCCCCCCCCCccc
Q 015650 293 LLQEVR--------RGADRAEIYSLAFSSNAQWLAVSSD----------KGTVHVFNLKVNSGSARSEPRSTSDPTLPTS 354 (403)
Q Consensus 293 ~~~~~~--------~~~~~~~v~~l~~s~d~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 354 (403)
.+..+. .+........++++++++.|+.... .+.|.++|+.+++.
T Consensus 261 v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv----------------- 323 (386)
T 3sjl_D 261 FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER----------------- 323 (386)
T ss_dssp ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-----------------
T ss_pred eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeE-----------------
Confidence 333332 1111233445778999998887643 24688889988873
Q ss_pred ccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCC-EEEEEcc
Q 015650 355 SLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKN-TVVILGM 400 (403)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~-~l~~~~~ 400 (403)
+.++... ..+..++|++|++ .|+++..
T Consensus 324 ------------------~~~i~vg-~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 324 ------------------LAKFEMG-HEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp ------------------EEEEEEE-EEECEEEECSSSSCEEEEEET
T ss_pred ------------------EEEEECC-CCcceEEECCCCCeEEEEEcC
Confidence 2223332 2577899999997 7777543
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.45 E-value=1.2e-10 Score=105.99 Aligned_cols=195 Identities=11% Similarity=0.026 Sum_probs=133.5
Q ss_pred eeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE-e--cC--eEEEEEcCCc
Q 015650 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-L--EQ--KIFVYNFADL 204 (403)
Q Consensus 130 ~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~--d~--~i~i~d~~~~ 204 (403)
.....+++++++.++++...+ +.|++||..+++............ ++|++++..++ . ++ .|++|+...+
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~-----~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDD-----PRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTT-----TEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEeCCCCEEEEecCC-----CcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 356788888888877777766 899999998877665555433344 99999987655 3 23 8999998765
Q ss_pred eeeeEe----eccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEe-----ecCCce-E-EEEEcCC-CCE
Q 015650 205 KLLHQI----ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM-----AHDSRI-A-CFALTQD-GQL 272 (403)
Q Consensus 205 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~-----~~~~~i-~-~~~~sp~-g~~ 272 (403)
.....+ .........+++++++..+|++ ..++.|+.||..++....+. ++...- . .++|+|+ +.+
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~---d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFV---DSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEE---CTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEE---ECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 443333 2134456778999976666663 24789999999887655541 122222 3 9999995 555
Q ss_pred EEEEeCCCcEEEEEEcCCCcEEEEEecCC-------------CcccEEEEEeCCCCCEEEEEe-CCCcEEEEEeecCC
Q 015650 273 LATSSTKGTLVRIFNTLDGTLLQEVRRGA-------------DRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVNS 336 (403)
Q Consensus 273 l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-------------~~~~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~~ 336 (403)
+++-..++. |+.|+.. ++ +..+.+.. .-.....|+++++|+++++-. .++.|+.|++.+++
T Consensus 282 yv~d~~~~~-I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 282 YMSDQNLSS-VYKITPD-GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EEEETTTTE-EEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEEeCCCCE-EEEEecC-CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 555556677 9999865 43 33333211 013478999999999777777 88999999976654
No 215
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=6.8e-12 Score=111.76 Aligned_cols=167 Identities=10% Similarity=0.106 Sum_probs=124.3
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEcCCCe-----------eEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFR-----------EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
.++.+++++...++++|+.+++++|+++... ...... ... |..+.| ++..++.+ .+
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~----lp~-V~~l~f--d~~~L~v~-~~----- 105 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKE----IPD-VIFVCF--HGDQVLVS-TR----- 105 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEE----CTT-EEEEEE--ETTEEEEE-ES-----
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEee----CCC-eeEEEE--CCCEEEEE-cC-----
Confidence 6889999999999999998899999975332 111122 334 899999 44444444 55
Q ss_pred ceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE-ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEe
Q 015650 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (403)
+.|++||+.+........ +...+.++.+.+....++ .||.|++||+.+++... +...+.+++|+|++ ++++
T Consensus 106 ~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg- 178 (388)
T 1xip_A 106 NALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVL- 178 (388)
T ss_dssp SEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEE-
T ss_pred CcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEE-
Confidence 899999998776555554 777888888877653333 69999999999876643 34578899999988 3333
Q ss_pred eCCccCeEEEEEccCCce---eEE------e---ecCCceEEEEEcCCCCEEEE
Q 015650 234 PGLQKGQVRVEHYASKRT---KFI------M---AHDSRIACFALTQDGQLLAT 275 (403)
Q Consensus 234 ~g~~d~~i~v~d~~~~~~---~~~------~---~~~~~i~~~~~sp~g~~l~s 275 (403)
..||.+++|+...... ..+ . +|...|.+|.|.+++.+|++
T Consensus 179 --~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 179 --LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp --ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred --EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 4789999999988773 344 2 36788999999999998886
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=1.8e-11 Score=109.01 Aligned_cols=172 Identities=15% Similarity=0.145 Sum_probs=123.0
Q ss_pred eEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc-----------eeEEEecCCceeEEEEecCceEEE--ecCeEE
Q 015650 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR-----------CIGELSFRSEVRSVKLRRDRIIVV--LEQKIF 197 (403)
Q Consensus 131 ~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~~~--~d~~i~ 197 (403)
.+..+++++....+++++.+ .+.+|++...+ ......+.. |..++| |+.+++ .++.|+
T Consensus 39 ~~nlLais~~~gll~a~~~~------~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS------KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALY 109 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT------EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEE
T ss_pred cccEEEEcCCCCEEEEeCCC------EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEE
Confidence 46677777776666666654 67779865433 223344666 999999 666666 689999
Q ss_pred EEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEe
Q 015650 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS 277 (403)
Q Consensus 198 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~ 277 (403)
+||+++......+..+...+..+. +-...++++ ..||.|.+||+..+.... +...|+|++|+|+| ++.|.
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~--~~~p~~av~---~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~ 179 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLK--NVNNTLVIL---NSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLL 179 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEE--ECSSEEEEE---ETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEE
T ss_pred EEEchhhhccCccceeecceeeEE--ecCCCEEEE---ECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEE
Confidence 999987665555555555555444 333343333 478999999999766543 45689999999999 67899
Q ss_pred CCCcEEEEEEcCCCcE--EEEEec----C---CCcccEEEEEeCCCCCEEEEEe
Q 015650 278 TKGTLVRIFNTLDGTL--LQEVRR----G---ADRAEIYSLAFSSNAQWLAVSS 322 (403)
Q Consensus 278 ~dg~~i~iwd~~~~~~--~~~~~~----~---~~~~~v~~l~~s~d~~~l~s~~ 322 (403)
.||. +++|+...++. ..++.. + .|...|.+|.|.+++.+|++-.
T Consensus 180 ~dg~-i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 180 KDRS-FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp TTSC-EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred cCCc-EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9999 99999877775 556621 1 2557899999999999888643
No 217
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.37 E-value=1.8e-09 Score=93.74 Aligned_cols=230 Identities=10% Similarity=-0.017 Sum_probs=152.8
Q ss_pred CCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEEC
Q 015650 85 PPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~ 163 (403)
...+.++++.++|.++++.. ++.|..|+.. ++.. ...+. .....+..+.+.+++.++++...+ +.|..|+.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~ 132 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLP-QPDSGPYGITEGLNGDIWFTQLNG-----DRIGKLTA 132 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECS-STTCCEEEEEECSTTCEEEEETTT-----TEEEEECT
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCC-CCCCCCccceECCCCCEEEEccCC-----CeEEEECC
Confidence 45789999999999888776 4559999877 3332 22332 234567888888887777766555 78999997
Q ss_pred CCCceeEE-Ee-cCCceeEEEEecCceEEEe---cCeEEEEEcCCceeeeE-eeccCCCceeEEEeeCCCeEEEEeeCCc
Q 015650 164 HQSRCIGE-LS-FRSEVRSVKLRRDRIIVVL---EQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (403)
Q Consensus 164 ~~~~~~~~-~~-~~~~i~~~~~~~~~~~~~~---d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 237 (403)
. ++.... +. ....+..+++.+++.+.+. ++.|..||. +++.... ..........+++.+++ .++++. ..
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~--~~ 207 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVE--IM 207 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEE--TT
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEc--cC
Confidence 7 554422 22 3457889999999886663 578999998 5554332 11223345667777765 455543 24
Q ss_pred cCeEEEEEccCCceeEE--eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCC
Q 015650 238 KGQVRVEHYASKRTKFI--MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNA 315 (403)
Q Consensus 238 d~~i~v~d~~~~~~~~~--~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~ 315 (403)
.+.|.+||. .+....+ ..+...+.+++++++|+++++...++. |..||. +++.. .+........+.+++++++|
T Consensus 208 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g 283 (300)
T 2qc5_A 208 GNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ-IGRITN-DNTIQ-EYQLQTENAEPHGITFGKDG 283 (300)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEECT-TSCEE-EEECCSTTCCCCCEEECTTS
T ss_pred CCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe-EEEECC-CCcEE-EEECCccCCccceeEeCCCC
Confidence 568999998 4333333 234566899999999997766656677 999997 55543 33322233568899999999
Q ss_pred CEEEEEeCCCcEEEEEee
Q 015650 316 QWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 316 ~~l~s~~~dg~v~iwd~~ 333 (403)
+++++.. . .|..+|.+
T Consensus 284 ~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 284 SVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CEEEECS-S-EEEEEEEC
T ss_pred CEEEEcc-C-ceEEeCCC
Confidence 8666554 4 67666653
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.36 E-value=4.5e-10 Score=98.09 Aligned_cols=222 Identities=13% Similarity=0.047 Sum_probs=143.2
Q ss_pred eeEEEEeeeCCeE-EEeeCCCCCCCCCceEEEEECCCCceeEEEe-cCCceeEEEEecCceEEEe---cCeEEEEEcCCc
Q 015650 130 IGVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVVL---EQKIFVYNFADL 204 (403)
Q Consensus 130 ~~v~~~~~~~~~~-~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~---d~~i~i~d~~~~ 204 (403)
.......|++++. ++++...+ +.|..|+. +++. ..+. ....+..+++.++|++++. ++.|.+|+.. +
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~-----~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVG-----RRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTT-----TEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCccCCeEeCCCCEEEEEECCC-----CEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 3455677888765 45555555 89999997 5553 4444 6677899999999998774 3689999975 5
Q ss_pred eeeeEeecc----CCCceeEEEeeCCCeEEEEee--CC-------------ccCeEEEEEccCCceeEEeecCCceEEEE
Q 015650 205 KLLHQIETI----ANPKGLCAVSQGVGSLVLVCP--GL-------------QKGQVRVEHYASKRTKFIMAHDSRIACFA 265 (403)
Q Consensus 205 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--g~-------------~d~~i~v~d~~~~~~~~~~~~~~~i~~~~ 265 (403)
+........ ...+..+++.+++. +++.-. |. ..+.|..||..++....+. .......++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~ 194 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLA 194 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEE
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceE
Confidence 432222111 12345688888775 333210 11 1256777777666665554 455678899
Q ss_pred EcCCCCEEEEEeCC------CcEEEEEEcCCCcE--EEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 266 LTQDGQLLATSSTK------GTLVRIFNTLDGTL--LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 266 ~sp~g~~l~s~~~d------g~~i~iwd~~~~~~--~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
|+||++.|+.+... +. |++|++..+.. ...+... .......++++++|+++++ ..+ .|.+|+.+ ++.
T Consensus 195 ~spdg~~lyv~~~~~~~~~~~~-i~~~~~~~~~l~~~~~~~~~-~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~-g~~ 269 (305)
T 3dr2_A 195 FSPDEQTLYVSQTPEQGHGSVE-ITAFAWRDGALHDRRHFASV-PDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD-GQL 269 (305)
T ss_dssp ECTTSSEEEEEECCC---CCCE-EEEEEEETTEEEEEEEEECC-SSSCCCSEEECTTSCEEEC-CSS-EEEEECTT-SCE
T ss_pred EcCCCCEEEEEecCCcCCCCCE-EEEEEecCCCccCCeEEEEC-CCCCCCeEEECCCCCEEEe-cCC-cEEEECCC-CCE
Confidence 99999988777665 56 99999876541 1122111 2234567899999995554 444 48888863 331
Q ss_pred CCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 338 SARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
+..+..+. .+..++|+++++.|++++.+|
T Consensus 270 -----------------------------------~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 270 -----------------------------------LGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp -----------------------------------EEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred -----------------------------------EEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 22344444 578899999999999887654
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.36 E-value=1.4e-09 Score=97.25 Aligned_cols=228 Identities=11% Similarity=0.040 Sum_probs=147.5
Q ss_pred CCCCEEEEEc--CCcEEEEEcCC--CeeEEEEecc------cCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC
Q 015650 95 QDHGCFAAGT--DHGFRIYNCDP--FREIFRRDFE------RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (403)
Q Consensus 95 ~d~~~l~~~~--~~~i~iw~~~~--~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~ 164 (403)
+++++|.+.+ ++.|.|+|+.+ .+....+.++ ......-..+...+++.++...+....-..+.|.++|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 8899988776 45599999863 3444445552 011123445566788854433322101112689999999
Q ss_pred CCceeEEEe-cCC---ceeEEEEecCceEEE-e---------------------cCeEEEEEcCCceeeeEeeccCC--C
Q 015650 165 QSRCIGELS-FRS---EVRSVKLRRDRIIVV-L---------------------EQKIFVYNFADLKLLHQIETIAN--P 216 (403)
Q Consensus 165 ~~~~~~~~~-~~~---~i~~~~~~~~~~~~~-~---------------------d~~i~i~d~~~~~~~~~~~~~~~--~ 216 (403)
+++.+.++. ... --..+.|+|++..++ + +++|.+||+.+++.++++..... .
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 999999887 222 234588899988776 4 37999999999888888765321 1
Q ss_pred ceeEEE--eeCCCeEEEEee---CCccCeEEEEEccCCceeEEe-----ec----------------CCceEEEEEcCCC
Q 015650 217 KGLCAV--SQGVGSLVLVCP---GLQKGQVRVEHYASKRTKFIM-----AH----------------DSRIACFALTQDG 270 (403)
Q Consensus 217 ~~~~~~--~~~~~~~~~~~~---g~~d~~i~v~d~~~~~~~~~~-----~~----------------~~~i~~~~~sp~g 270 (403)
...+.| +|+++..|+++. -..+++|.+|..+.+...... .. ......|.+++||
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence 223445 888887777762 004568877766553321111 10 2346889999999
Q ss_pred CEEEEEeCCCcEEEEEEcCC---CcEEEEEecCCC------------cccEEEEEeCCCCCEEEEEe
Q 015650 271 QLLATSSTKGTLVRIFNTLD---GTLLQEVRRGAD------------RAEIYSLAFSSNAQWLAVSS 322 (403)
Q Consensus 271 ~~l~s~~~dg~~i~iwd~~~---~~~~~~~~~~~~------------~~~v~~l~~s~d~~~l~s~~ 322 (403)
++|+++......|.+||+.+ .+.+..+..+.. .+.-..++++|||++|+++.
T Consensus 333 rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 333 KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99998877443499999853 456666654311 01357899999999999887
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.35 E-value=4e-09 Score=94.33 Aligned_cols=189 Identities=12% Similarity=0.064 Sum_probs=123.7
Q ss_pred eEEEeeCCCCCCCCCceEEEEECCCC----ceeEEEe--------cCCceeEEEEecCceEEE--ec------CeEEEEE
Q 015650 141 ILALVGGGPDPQYPLNKVMIWDDHQS----RCIGELS--------FRSEVRSVKLRRDRIIVV--LE------QKIFVYN 200 (403)
Q Consensus 141 ~~~~~s~~~d~~~~~~~i~iwd~~~~----~~~~~~~--------~~~~i~~~~~~~~~~~~~--~d------~~i~i~d 200 (403)
..+++++..+ +.|.++|+.+. +.++.++ .......+.+.|+|.++. .+ +.|.++|
T Consensus 96 ~~l~v~~l~s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 96 RFLIVPGLRS-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CEEEEEBTTT-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEEC
T ss_pred CEEEEccCCC-----CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEE
Confidence 3455666666 89999999765 5666663 112456788899994444 23 6899999
Q ss_pred cCCceeeeEeeccCCC---ceeEEEeeCCCeEEEEeeC----------------CccCeEEEEEccCCcee-EEeec--C
Q 015650 201 FADLKLLHQIETIANP---KGLCAVSQGVGSLVLVCPG----------------LQKGQVRVEHYASKRTK-FIMAH--D 258 (403)
Q Consensus 201 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g----------------~~d~~i~v~d~~~~~~~-~~~~~--~ 258 (403)
.++++.+..+.....+ -+.+.++|+++.++...-| .....|.+||+.+++.. .+... .
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 9999998888643222 2347789988843322100 23689999999886533 33321 1
Q ss_pred CceEEEEE--cCCCCEEEEEeC-----C-CcEEEEEEcCCCcE--EEEEecCCC----------------cccEEEEEeC
Q 015650 259 SRIACFAL--TQDGQLLATSST-----K-GTLVRIFNTLDGTL--LQEVRRGAD----------------RAEIYSLAFS 312 (403)
Q Consensus 259 ~~i~~~~~--sp~g~~l~s~~~-----d-g~~i~iwd~~~~~~--~~~~~~~~~----------------~~~v~~l~~s 312 (403)
.....+.| +|++++++.++. . ++ |.+|....++. ++.+..... ......|.+|
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~-V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSS-IWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEE-EEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCce-EEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 23455656 999999988875 4 45 88776654432 122111100 1357889999
Q ss_pred CCCCEEEEEe-CCCcEEEEEeecC
Q 015650 313 SNAQWLAVSS-DKGTVHVFNLKVN 335 (403)
Q Consensus 313 ~d~~~l~s~~-~dg~v~iwd~~~~ 335 (403)
+||++|.++. ..+.|.+||+...
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSST
T ss_pred CCCCEEEEEeCCCCEEEEEEecCC
Confidence 9999998776 5789999999744
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=6.3e-10 Score=98.90 Aligned_cols=233 Identities=9% Similarity=-0.005 Sum_probs=154.3
Q ss_pred CCeEEEEEcCCCCEEEEEc--CCc-EEEEEcCCCeeEEEEecc------cCcceeEEEEeeeCCeEEEeeCCC-----CC
Q 015650 86 PTLLHISFNQDHGCFAAGT--DHG-FRIYNCDPFREIFRRDFE------RGGGIGVVEMLFRCNILALVGGGP-----DP 151 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~--~~~-i~iw~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~s~~~-----d~ 151 (403)
..+..++++++|+++++.. +++ ++||.++.++ . ..+. ..+...+..+.+++++.+++.... +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~--~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~- 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-L--IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV- 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-E--EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC-
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-e--ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC-
Confidence 6789999999999998863 222 6777765332 2 2221 124467899999998766554322 3
Q ss_pred CCCCceEEEEECCCCceeEEEecC-------CceeEEEEecC-ceEEEe------cCeEEEEEcCCceeeeEeeccC---
Q 015650 152 QYPLNKVMIWDDHQSRCIGELSFR-------SEVRSVKLRRD-RIIVVL------EQKIFVYNFADLKLLHQIETIA--- 214 (403)
Q Consensus 152 ~~~~~~i~iwd~~~~~~~~~~~~~-------~~i~~~~~~~~-~~~~~~------d~~i~i~d~~~~~~~~~~~~~~--- 214 (403)
+.|.+||+.+++.+..+... ..+..+++.++ +..+++ ++.|.+||+.+++..+.+..+.
T Consensus 93 ----~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 93 ----PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp ----CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred ----CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence 68999999999887777622 34689999975 554443 4689999998877655443210
Q ss_pred --------------------------CCceeEEEeeCCCeEEEEeeCCccCeEEEEEccC---Cc--------eeEEeec
Q 015650 215 --------------------------NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS---KR--------TKFIMAH 257 (403)
Q Consensus 215 --------------------------~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~---~~--------~~~~~~~ 257 (403)
.....++++++++.+|++. .....+..++... .. .....++
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSP--MHSTSMYRIKSADLSNLQLTDAELGSKIERYSE 246 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEE--SSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEe--CCCCeEEEEEHHHhcCCCCChhhhhcceEeccc
Confidence 1235688999888777664 2234555555321 10 0122244
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEE
Q 015650 258 DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVF 330 (403)
Q Consensus 258 ~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iw 330 (403)
......++++++|+++++...++. |.+||.++++....... .....+.+++|.++++++++.+..+.+.+|
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~~~-V~~~d~~~G~~~~~~~~-~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAHSA-IGVITSADRAYKLLVTD-EKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGGTE-EEEEETTTTEEEEEEEC-GGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred CCCCceEEECCCCCEEEEccCCCe-EEEEECCCCCEEEEEEC-CceecCCeeEECCCCcEEEEeCcccccccc
Confidence 456678999999999888888888 99999856765433332 123568999999999888887655544433
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.32 E-value=1.2e-10 Score=113.52 Aligned_cols=197 Identities=8% Similarity=0.079 Sum_probs=130.6
Q ss_pred CcceeEEEEeeeCCeEEEe-----eCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE---ec-----
Q 015650 127 GGGIGVVEMLFRCNILALV-----GGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LE----- 193 (403)
Q Consensus 127 ~~~~~v~~~~~~~~~~~~~-----s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d----- 193 (403)
++...+..+.|+||+..++ .++.. ..|++||+.+++.+...........++|+ |+..++ .+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~-----~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDW-----REIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCE-----EEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC--
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCce-----EEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccc
Confidence 4555788889999998777 34444 68999999999866542222224578899 987666 23
Q ss_pred --------CeEEEEEcCCcee--eeEee--c-cCCCceeEEEeeCCCeEEEEee-CCccCeEEEEEccCC--ceeEEeec
Q 015650 194 --------QKIFVYNFADLKL--LHQIE--T-IANPKGLCAVSQGVGSLVLVCP-GLQKGQVRVEHYASK--RTKFIMAH 257 (403)
Q Consensus 194 --------~~i~i~d~~~~~~--~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~-g~~d~~i~v~d~~~~--~~~~~~~~ 257 (403)
..|++|++.++.. ...+. . +......+.++++++.+++... +.....|+++|+.++ ....+..+
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 2499999987542 22222 2 2334567889999987766553 223458999999775 56677777
Q ss_pred CCceEEEEEcCCCCEEEEEeC-C---CcEEEEEEcCCCcE--EEEEecCCCcccEEEEEeCCCCCEEEEEeC-CC--cEE
Q 015650 258 DSRIACFALTQDGQLLATSST-K---GTLVRIFNTLDGTL--LQEVRRGADRAEIYSLAFSSNAQWLAVSSD-KG--TVH 328 (403)
Q Consensus 258 ~~~i~~~~~sp~g~~l~s~~~-d---g~~i~iwd~~~~~~--~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~-dg--~v~ 328 (403)
....... ++++|..|+..+. + +. |.++|+.++.. ...+.. +...+. .|++++++|+.... ++ .|+
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~-l~~~d~~~~~~~~~~~l~~--~~~~~~--~~s~~g~~lv~~~~~~g~~~l~ 353 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRR-LVTVDAANPGPAHWRDLIP--ERQQVL--TVHSGSGYLFAEYMVDATARVE 353 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCE-EEEEETTSCCGGGCEEEEC--CCSSCE--EEEEETTEEEEEEEETTEEEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCE-EEEEeCCCCCccccEEEec--CCCCEE--EEEEECCEEEEEEEECCeeEEE
Confidence 6666655 6677776655443 3 46 99999987654 234443 333444 88999998877664 44 688
Q ss_pred EEEeecC
Q 015650 329 VFNLKVN 335 (403)
Q Consensus 329 iwd~~~~ 335 (403)
+|+++.+
T Consensus 354 ~~d~~g~ 360 (693)
T 3iuj_A 354 QFDYEGK 360 (693)
T ss_dssp EECTTSC
T ss_pred EEECCCC
Confidence 8887643
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=8.2e-10 Score=98.14 Aligned_cols=198 Identities=9% Similarity=0.026 Sum_probs=130.2
Q ss_pred eeEEEEeeeCCeEEEeeCCC--CCCCCCceEEEEECCCCceeEEEe--------cCCceeEEEEecCceEEEec------
Q 015650 130 IGVVEMLFRCNILALVGGGP--DPQYPLNKVMIWDDHQSRCIGELS--------FRSEVRSVKLRRDRIIVVLE------ 193 (403)
Q Consensus 130 ~~v~~~~~~~~~~~~~s~~~--d~~~~~~~i~iwd~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~~d------ 193 (403)
.....+++++++..+++... + +.++||.+.+++. ..+. +-..+..+++.+++++.+.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~-----~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~ 90 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQ-----PEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSK 90 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGC-----CSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHT
T ss_pred CCcceEEECCCCCEEEEeCCCCC-----CceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcC
Confidence 46778888888877777432 2 3255555545543 2221 33578999999999877743
Q ss_pred --CeEEEEEcCCceeeeEeecc------CCCceeEEEeeCCCeEEEEeeC-CccCeEEEEEccCCceeEEe-ec------
Q 015650 194 --QKIFVYNFADLKLLHQIETI------ANPKGLCAVSQGVGSLVLVCPG-LQKGQVRVEHYASKRTKFIM-AH------ 257 (403)
Q Consensus 194 --~~i~i~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g-~~d~~i~v~d~~~~~~~~~~-~~------ 257 (403)
+.|.+||+.+++.+..+... ......+++++++..+|++-.+ ..++.|.+||+.+++...+. .|
T Consensus 91 ~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 91 SVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp SCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred CCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 68999999999877766532 1234678888876666655321 14688999999875543322 11
Q ss_pred -----------------------CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcC---CCc--------EEEEEecCCCc
Q 015650 258 -----------------------DSRIACFALTQDGQLLATSSTKGTLVRIFNTL---DGT--------LLQEVRRGADR 303 (403)
Q Consensus 258 -----------------------~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~---~~~--------~~~~~~~~~~~ 303 (403)
...+..|+|+|||+.|+.+...+..|..++.. .+. .+..+. +.
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g---~~ 247 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS---EK 247 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE---EC
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc---cC
Confidence 02357899999999998888777425555532 111 011111 22
Q ss_pred ccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 304 AEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 304 ~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
.....++++++|.++++...++.|.+||..+++
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 345679999999999998899999999984443
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.29 E-value=2.3e-09 Score=103.96 Aligned_cols=231 Identities=11% Similarity=0.053 Sum_probs=144.4
Q ss_pred CCEEEEEc-CCcEEEEEcCCCeeEEEEecc-cCc-ceeEE-EEeeeCCeEEEeeCC-----CCCCCCCceEEEEECCCCc
Q 015650 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFE-RGG-GIGVV-EMLFRCNILALVGGG-----PDPQYPLNKVMIWDDHQSR 167 (403)
Q Consensus 97 ~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~-~~~-~~~v~-~~~~~~~~~~~~s~~-----~d~~~~~~~i~iwd~~~~~ 167 (403)
+..|++++ ++.|..+|.++++.+...... ... ...+. ..... ++..++..+ .+ +.|+.||..+|+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~~~~~-----g~v~a~D~~tG~ 194 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGGAEFGVR-----GYVTAYDAETGK 194 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBCTTTCCB-----CEEEEEETTTCC
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCCCccCCC-----CEEEEEECCCCc
Confidence 44566665 666999999999887655442 000 01111 00111 444555432 24 899999999999
Q ss_pred eeEEEec-C-C------------------------------ceeEEEEecCceEEE---ecC------------------
Q 015650 168 CIGELSF-R-S------------------------------EVRSVKLRRDRIIVV---LEQ------------------ 194 (403)
Q Consensus 168 ~~~~~~~-~-~------------------------------~i~~~~~~~~~~~~~---~d~------------------ 194 (403)
.+..+.. . . ....+++.++..+++ .++
T Consensus 195 ~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~ 274 (689)
T 1yiq_A 195 EAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFL 274 (689)
T ss_dssp EEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTT
T ss_pred EEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceee
Confidence 9877751 1 0 012467887655444 233
Q ss_pred -eEEEEEcCCceeeeEeeccCCC---------ceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeecC------
Q 015650 195 -KIFVYNFADLKLLHQIETIANP---------KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHD------ 258 (403)
Q Consensus 195 -~i~i~d~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~------ 258 (403)
.|..+|.++|+.+..++..... .....+..++...-++..+..+|.++++|.+++++..-....
T Consensus 275 ~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~ 354 (689)
T 1yiq_A 275 SSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTK 354 (689)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred eeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccc
Confidence 4999999999999887653211 111222334432112223568999999999887654211000
Q ss_pred -----------------------C-----------ceEEEEEcCCCCEEEEEeC--------------------------
Q 015650 259 -----------------------S-----------RIACFALTQDGQLLATSST-------------------------- 278 (403)
Q Consensus 259 -----------------------~-----------~i~~~~~sp~g~~l~s~~~-------------------------- 278 (403)
. .-..++|+|+..++++...
T Consensus 355 ~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 355 GMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred ccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCc
Confidence 0 0113788998888876532
Q ss_pred -------------------CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 279 -------------------KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 279 -------------------dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
+|. |+.||+.+++.+-.+..+ ..+..-.+...+.+++.++.||.|+.||.++++.
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGK-LIAWDPVKQQAAWEVPYV---TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEE-EEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cccccCcccccCCCCCCCccee-EEEEECCCCCeEeEccCC---CCccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence 367 999999999998887743 3333345556788999999999999999999984
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.28 E-value=9.9e-11 Score=103.99 Aligned_cols=212 Identities=6% Similarity=-0.015 Sum_probs=134.7
Q ss_pred cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC----------CCCCCCCceEEEEECCCCceeEEEecC-
Q 015650 107 GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG----------PDPQYPLNKVMIWDDHQSRCIGELSFR- 175 (403)
Q Consensus 107 ~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~----------~d~~~~~~~i~iwd~~~~~~~~~~~~~- 175 (403)
.|.++|.++++.+ ..+..+. .+ .+.+++++..++.+. .+ +.|.+||..+++.+.++...
T Consensus 47 ~vsvID~~t~~v~--~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~-----~~VsviD~~T~~vv~~I~v~~ 116 (368)
T 1mda_H 47 ENWVSCAGCGVTL--GHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRT-----DYVEVFDPVTFLPIADIELPD 116 (368)
T ss_dssp EEEEEETTTTEEE--EEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEE-----EEEEEECTTTCCEEEEEEETT
T ss_pred eEEEEECCCCeEE--EEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCC-----CEEEEEECCCCCEEEEEECCC
Confidence 6789999888776 4444223 23 688888875554443 34 78999999999999998732
Q ss_pred -------CceeEEEEecCceEEE-e----cCeEEE--EEcCCceeeeEeeccCC-------CceeEEE------------
Q 015650 176 -------SEVRSVKLRRDRIIVV-L----EQKIFV--YNFADLKLLHQIETIAN-------PKGLCAV------------ 222 (403)
Q Consensus 176 -------~~i~~~~~~~~~~~~~-~----d~~i~i--~d~~~~~~~~~~~~~~~-------~~~~~~~------------ 222 (403)
.....+.++|||++++ . ++.+.+ +|+.+ +..+..... ....+++
T Consensus 117 ~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~ 193 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLA 193 (368)
T ss_dssp SCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECC
T ss_pred ccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECc
Confidence 3467899999998777 2 356888 88866 333321100 0000111
Q ss_pred -------------------------eeCCCeEEEEeeCCccCeEEEEEccCCceeEEee----------c---CCceEEE
Q 015650 223 -------------------------SQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA----------H---DSRIACF 264 (403)
Q Consensus 223 -------------------------~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~----------~---~~~i~~~ 264 (403)
.+++..+++++ . +.+.+.|........+.. + ......+
T Consensus 194 ~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs---~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v 269 (368)
T 1mda_H 194 AAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV---A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMV 269 (368)
T ss_dssp SSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB---S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCE
T ss_pred cccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc---C-CEEEEEECCCCcceEEEEEEeccccccccccccCcceee
Confidence 12222222221 2 455666654422111110 0 0111226
Q ss_pred EEcCCCCEEEEEeC-C--------CcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCE-EEEEe-CCCcEEEEEee
Q 015650 265 ALTQDGQLLATSST-K--------GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQW-LAVSS-DKGTVHVFNLK 333 (403)
Q Consensus 265 ~~sp~g~~l~s~~~-d--------g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~-l~s~~-~dg~v~iwd~~ 333 (403)
+|+||+++|+.+.. . +. +.++|+.+++.+..+..+ .....|+|+|||++ +++.. .++.|.++|+.
T Consensus 270 ~~s~dg~~lyV~~~~~~~~~~~~~~~-~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 270 AKLKNTDGIMILTVEHSRSCLAAAEN-TSSVTASVGQTSGPISNG---HDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp EEETTTTEEEEEEEECSSCTTSCEEE-EEEEESSSCCEEECCEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred EEcCCCCEEEEEeccccCcccccCCC-EEEEECCCCeEEEEEECC---CCcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 89999998887643 2 35 679999999999988853 36889999999984 55666 59999999999
Q ss_pred cCCCCC
Q 015650 334 VNSGSA 339 (403)
Q Consensus 334 ~~~~~~ 339 (403)
+.+.+.
T Consensus 346 t~kvv~ 351 (368)
T 1mda_H 346 SDQDQS 351 (368)
T ss_dssp SCEEEE
T ss_pred CCcEEE
Confidence 998533
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.28 E-value=1.5e-09 Score=91.17 Aligned_cols=165 Identities=10% Similarity=0.002 Sum_probs=117.0
Q ss_pred CceeEEEecCCc--eeEEEEecCceEEEe-----cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCcc
Q 015650 166 SRCIGELSFRSE--VRSVKLRRDRIIVVL-----EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (403)
Q Consensus 166 ~~~~~~~~~~~~--i~~~~~~~~~~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 238 (403)
.+.+.++.|... ...+.|++++.+.++ ++.|.++|+.+++.+..+...... ....+..+++.+|++. ..+
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~~g~~lyv~t--~~~ 85 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-FGEGLTLLNEKLYQVV--WLK 85 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-CEEEEEEETTEEEEEE--TTC
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-ceEEEEEeCCEEEEEE--ecC
Confidence 356677776543 579999998766653 468999999999998887643322 3334555677777765 478
Q ss_pred CeEEEEEccCCce-eEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcc---cEEEEEeCCC
Q 015650 239 GQVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRA---EIYSLAFSSN 314 (403)
Q Consensus 239 ~~i~v~d~~~~~~-~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~---~v~~l~~s~d 314 (403)
+.+.++|..+.++ ..+..... ....+++||+.|+.+..++. |.++|..+.+.+..+..+.... .++.+.|. +
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~-l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSI-LYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSE-EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCe-EEEEECCCCcEEEEEEECCCCcccccceeEEEE-C
Confidence 9999999988554 34432211 12345668887877777777 9999999999988887532211 36788888 7
Q ss_pred CCEEEEEeCCCcEEEEEeecCCC
Q 015650 315 AQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 315 ~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
|+..+....++.|.+.|..+++.
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCE
T ss_pred CEEEEecCCCCeEEEEECCCCcE
Confidence 76666665788999999999984
No 227
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.28 E-value=1.9e-08 Score=85.93 Aligned_cols=228 Identities=7% Similarity=-0.040 Sum_probs=139.9
Q ss_pred CCEEEEEcCCcEEEEEcCCCeeEE---EEecccCcceeEEEEeeeCC-eEEEeeCCCCCCCCCceEEEEECCCCceeEEE
Q 015650 97 HGCFAAGTDHGFRIYNCDPFREIF---RRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMIWDDHQSRCIGEL 172 (403)
Q Consensus 97 ~~~l~~~~~~~i~iw~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~ 172 (403)
|.+|..+..+.|+.++++...... ...+. ........++++++ +.++++.... +.|..++...+.....+
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~~~ 74 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISE-----PSIGRASLHGGEPTTII 74 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTT-----TEEEEEESSSCCCEEEE
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEECCC-----CEEEEEecCCCCcEEEE
Confidence 345666655568888887543210 01111 12245678888873 4555555445 89999998765543333
Q ss_pred e-cCCceeEEEEecCc-eEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEcc
Q 015650 173 S-FRSEVRSVKLRRDR-IIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (403)
Q Consensus 173 ~-~~~~i~~~~~~~~~-~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~ 247 (403)
. .......+++.+++ .+.+. .+.|.++++........+.........+++++++..+|++..+...+.|..++++
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 3 23577899999864 44443 5789999986432222222222344678899987777776533225788888887
Q ss_pred CCceeEEe-ecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEe-CC
Q 015650 248 SKRTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSS-DK 324 (403)
Q Consensus 248 ~~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-~d 324 (403)
......+. ........+++++++..|+.+.. .+. |.++|.........+.. ......|+.. +..|+.+. ..
T Consensus 155 g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~-I~~~~~~g~~~~~~~~~---~~~P~gi~~d--~~~lyva~~~~ 228 (267)
T 1npe_A 155 GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR-AECLNPAQPGRRKVLEG---LQYPFAVTSY--GKNLYYTDWKT 228 (267)
T ss_dssp SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTEEEEEEEEEC---CCSEEEEEEE--TTEEEEEETTT
T ss_pred CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE-EEEEecCCCceEEEecC---CCCceEEEEe--CCEEEEEECCC
Confidence 75544433 23345789999998877766554 456 99999875544333332 1334566654 45555444 66
Q ss_pred CcEEEEEeecCC
Q 015650 325 GTVHVFNLKVNS 336 (403)
Q Consensus 325 g~v~iwd~~~~~ 336 (403)
+.|.++|..+++
T Consensus 229 ~~v~~~d~~~g~ 240 (267)
T 1npe_A 229 NSVIAMDLAISK 240 (267)
T ss_dssp TEEEEEETTTTE
T ss_pred CeEEEEeCCCCC
Confidence 889999988776
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.25 E-value=2.9e-08 Score=83.37 Aligned_cols=195 Identities=11% Similarity=0.033 Sum_probs=137.6
Q ss_pred eeEEEEeeeCCeEEEeeCCC--CCCCCCceEEEEECCCCceeEEEecCC--ceeEEEEecCceEEE--ecCeEEEEEcCC
Q 015650 130 IGVVEMLFRCNILALVGGGP--DPQYPLNKVMIWDDHQSRCIGELSFRS--EVRSVKLRRDRIIVV--LEQKIFVYNFAD 203 (403)
Q Consensus 130 ~~v~~~~~~~~~~~~~s~~~--d~~~~~~~i~iwd~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~--~d~~i~i~d~~~ 203 (403)
.....+.+++++.++++.+. + +.|.++|+.+++.+..+.... ....+++..+..+++ .++.+.++|..+
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~-----s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGR-----SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTT-----CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTT
T ss_pred CCcccEEEeCCCeEEEECCCCCC-----CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCC
Confidence 34578888886666665442 3 799999999999999887322 334566665544555 388999999999
Q ss_pred ceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce-eEEee--cC---CceEEEEEcCCCCEEEEEe
Q 015650 204 LKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMA--HD---SRIACFALTQDGQLLATSS 277 (403)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~~--~~---~~i~~~~~sp~g~~l~s~~ 277 (403)
++.+.++... .+ ....++++++.++++- .++.|.++|..+.+. ..+.- +. ..+..+.|. +|+..+...
T Consensus 96 ~~v~~~i~~g-~~-~g~glt~Dg~~l~vs~---gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~ 169 (266)
T 2iwa_A 96 LSNIKNFTHQ-MK-DGWGLATDGKILYGSD---GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW 169 (266)
T ss_dssp TEEEEEEECC-SS-SCCEEEECSSSEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred CcEEEEEECC-CC-CeEEEEECCCEEEEEC---CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC
Confidence 9999988654 12 2355778888877543 368999999988543 33332 11 236678887 775444444
Q ss_pred CCCcEEEEEEcCCCcEEEEEecCCC-----------cccEEEEEeCCCCCEE-EEEeCCCcEEEEEeecCC
Q 015650 278 TKGTLVRIFNTLDGTLLQEVRRGAD-----------RAEIYSLAFSSNAQWL-AVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 278 ~dg~~i~iwd~~~~~~~~~~~~~~~-----------~~~v~~l~~s~d~~~l-~s~~~dg~v~iwd~~~~~ 336 (403)
.++. |.+.|..+++.+..+..... ....+.|+|+|+++.| +++...+.|...++....
T Consensus 170 ~~~~-V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 170 QTDC-IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp TSSE-EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred CCCe-EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 5667 99999999999999874210 1356899999998765 555578899999998865
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.20 E-value=8.3e-09 Score=99.91 Aligned_cols=231 Identities=8% Similarity=0.061 Sum_probs=147.2
Q ss_pred CCEEEEEc-CCcEEEEEcCCCeeEEEEecc-cCc-ceeEE-EEeeeCCeEEEeeCC-----CCCCCCCceEEEEECCCCc
Q 015650 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFE-RGG-GIGVV-EMLFRCNILALVGGG-----PDPQYPLNKVMIWDDHQSR 167 (403)
Q Consensus 97 ~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~-~~~-~~~v~-~~~~~~~~~~~~s~~-----~d~~~~~~~i~iwd~~~~~ 167 (403)
+..|++++ ++.|..+|..+++.+...... ... ...+. ..... ++..++... .+ +.|+.||..+|+
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~-----g~v~a~D~~tG~ 201 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVR-----GYITAYDAETGE 201 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCB-----CEEEEEETTTCC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCC-----CEEEEEECCCCc
Confidence 44555555 666999999999888665542 000 01111 11112 344444432 24 899999999999
Q ss_pred eeEEEec-CCc--------------------------------eeEEEEecCceEEE--e-cC-----------------
Q 015650 168 CIGELSF-RSE--------------------------------VRSVKLRRDRIIVV--L-EQ----------------- 194 (403)
Q Consensus 168 ~~~~~~~-~~~--------------------------------i~~~~~~~~~~~~~--~-d~----------------- 194 (403)
.+..+.. ... ...+++.+++..++ . ++
T Consensus 202 ~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~ 281 (677)
T 1kb0_A 202 RKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLY 281 (677)
T ss_dssp EEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred EEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCee
Confidence 9888762 111 12467777655554 2 22
Q ss_pred --eEEEEEcCCceeeeEeeccCC---------CceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEee-c-----
Q 015650 195 --KIFVYNFADLKLLHQIETIAN---------PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA-H----- 257 (403)
Q Consensus 195 --~i~i~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~-~----- 257 (403)
.|..+|.++|+.+..++.... ....+....+++..-++..+..+|.++++|.+++++..-.. .
T Consensus 282 ~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~ 361 (677)
T 1kb0_A 282 LASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA 361 (677)
T ss_dssp TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred eEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc
Confidence 599999999999888764322 11223333455321122235689999999998876532111 0
Q ss_pred ------CCce------------------------EEEEEcCCCCEEEEEeCC----------------------------
Q 015650 258 ------DSRI------------------------ACFALTQDGQLLATSSTK---------------------------- 279 (403)
Q Consensus 258 ------~~~i------------------------~~~~~sp~g~~l~s~~~d---------------------------- 279 (403)
..++ ..++|+|++.++++...+
T Consensus 362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccc
Confidence 0011 157889998888775432
Q ss_pred ---------------CcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 280 ---------------GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 280 ---------------g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
+. |..||+.+++.+-.+.. ...+....+..++.+++.++.||.+++||.++++.
T Consensus 442 ~g~~~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~---~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGR-LLAWDPVAQKAAWSVEH---VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp CCEEECSSCCCSCCEEE-EEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cccccccccCCCCCccE-EEEEeCCCCcEEeecCC---CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 66 99999999999888773 33455555667888899999999999999999995
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.17 E-value=6.7e-09 Score=86.19 Aligned_cols=202 Identities=14% Similarity=0.099 Sum_probs=133.7
Q ss_pred ceeEEEecCCce--eEEEEecCceEEEe---cC--eEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccC
Q 015650 167 RCIGELSFRSEV--RSVKLRRDRIIVVL---EQ--KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG 239 (403)
Q Consensus 167 ~~~~~~~~~~~i--~~~~~~~~~~~~~~---d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 239 (403)
+.+.++.|.... ..+.|+ ++.+..+ +| .|+++|+++++.+..+.... ......+.++++.+++++ -.++
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~lt--w~~~ 107 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLT--WKNG 107 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEE--SSSS
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEE--eeCC
Confidence 456677765544 788998 5655442 33 89999999999988886533 334455666788888775 4689
Q ss_pred eEEEEEccCCce-eEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCc---ccEEEEEeCCCC
Q 015650 240 QVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR---AEIYSLAFSSNA 315 (403)
Q Consensus 240 ~i~v~d~~~~~~-~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~s~d~ 315 (403)
.+.+||..+.+. ..+.. .. ....+++|++.|+.+..++. |.++|..+.+.+..+...... ..++.+.|. +|
T Consensus 108 ~v~v~D~~t~~~~~ti~~-~~--eG~glt~dg~~L~~SdGs~~-i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNY-DG--EGWGLTHNDQYLIMSDGTPV-LRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp EEEEEETTTCCEEEEEEC-SS--CCCCEEECSSCEEECCSSSE-EEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEEECccCcEEEEEEC-CC--CceEEecCCCEEEEECCCCe-EEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 999999988554 34443 22 22233457777777666777 999999999999888753222 335668886 77
Q ss_pred CEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEE
Q 015650 316 QWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTV 395 (403)
Q Consensus 316 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l 395 (403)
+.++....++.|.+.|.++++.+..++.. ++.+... .........+.+||+|+++.|
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~----------------~L~~~~~-------~~~~~~~vlNGIA~dp~~~~l 239 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLN----------------GILAEAG-------PLPSPIDVLNGIAWDKEHHRL 239 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECT----------------TGGGGSC-------SCCSSCCCEEEEEEETTTTEE
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECC----------------cCccccc-------cccCcCCceEEEEEcCCCCEE
Confidence 76666667889999999999853333200 0110000 000112356889999999999
Q ss_pred EEEcc
Q 015650 396 VILGM 400 (403)
Q Consensus 396 ~~~~~ 400 (403)
++.+.
T Consensus 240 fVTGK 244 (262)
T 3nol_A 240 FVTGK 244 (262)
T ss_dssp EEEET
T ss_pred EEECC
Confidence 88764
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.17 E-value=1.9e-09 Score=99.82 Aligned_cols=236 Identities=10% Similarity=0.055 Sum_probs=153.6
Q ss_pred CCCCEEEEEc-CCc-EEEEEcCCCeeEEEEecccCcceeEEEEee-e-CCeEEEeeCCCCCC-------------CCCce
Q 015650 95 QDHGCFAAGT-DHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLF-R-CNILALVGGGPDPQ-------------YPLNK 157 (403)
Q Consensus 95 ~d~~~l~~~~-~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~~s~~~d~~-------------~~~~~ 157 (403)
+||++|.+.. ++. |.+.|+++.+......+. .......+.+ . |++.+++.+++... -..+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip--~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIP--NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECS--SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCC--CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 4889888776 333 999999998876434554 2234556665 3 55555554421100 01268
Q ss_pred EEEEECCCCceeEEEecCCceeEEEEecCceEEE--e-c--------------------------------------CeE
Q 015650 158 VMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--L-E--------------------------------------QKI 196 (403)
Q Consensus 158 i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~-d--------------------------------------~~i 196 (403)
+.++|..+.+.+.++.-......++++|+|++++ . + +.|
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 9999999999988888444677888999988777 1 1 136
Q ss_pred EEEEcCC--cee-eeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc------------eeEEeecCCce
Q 015650 197 FVYNFAD--LKL-LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR------------TKFIMAHDSRI 261 (403)
Q Consensus 197 ~i~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~------------~~~~~~~~~~i 261 (403)
.+.|.++ ++. +..+.... ....+.++||++.++++ +..+..|.++|+.+.+ +.....-....
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~-~PhGv~~sPDGk~v~V~--~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP 333 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIAN-NPHGCNMAPDKKHLCVA--GKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP 333 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEES-SCCCEEECTTSSEEEEE--CTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE
T ss_pred EEEeCcccCCceeEEEEecCC-CceEEEEcCCCCEEEEe--CCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc
Confidence 7777766 444 44554432 33678999999875554 4578899999998642 11112234457
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEEcCC----------CcEEEEEecCCCcc---cEEEEEeCCCCCEEEEEe---CCC
Q 015650 262 ACFALTQDGQLLATSSTKGTLVRIFNTLD----------GTLLQEVRRGADRA---EIYSLAFSSNAQWLAVSS---DKG 325 (403)
Q Consensus 262 ~~~~~sp~g~~l~s~~~dg~~i~iwd~~~----------~~~~~~~~~~~~~~---~v~~l~~s~d~~~l~s~~---~dg 325 (403)
..++|+|+|...++.-.|+. |.+||+.. .+.+.++..+...+ .-.++.++|||++|++.. .|+
T Consensus 334 ~h~aF~~dG~aY~t~~ldsq-V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr 412 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQ-VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDR 412 (595)
T ss_dssp EEEEECTTSEEEEEETTTTE-EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTS
T ss_pred ceEEECCCCeEEEEEecCCc-EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccc
Confidence 89999999943344556777 99999977 56777777642111 112235689999999886 244
Q ss_pred cE----------EEEEeecCC
Q 015650 326 TV----------HVFNLKVNS 336 (403)
Q Consensus 326 ~v----------~iwd~~~~~ 336 (403)
.+ .++|+..++
T Consensus 413 ~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 413 FLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp SCCCCSSCCEEEEEEECSSSS
T ss_pred cccCCCCCCCcceEEEcCCCc
Confidence 31 889995444
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.15 E-value=4.8e-08 Score=94.59 Aligned_cols=194 Identities=8% Similarity=0.061 Sum_probs=120.0
Q ss_pred CCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcc--------eeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc
Q 015650 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGG--------IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (403)
Q Consensus 96 d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~ 167 (403)
++.+++++.++.|..+|..+++.+.......... .....+.+..+.. ++. ..+ +.|..+|..+|+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v-~v~-~~d-----g~l~alD~~tG~ 149 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKV-YVG-AWD-----GRLIALDAATGK 149 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEE-EEE-CTT-----SEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEE-EEE-cCC-----CEEEEEECCCCC
Confidence 4444444445668899999888887665541110 0011223333333 333 334 899999999999
Q ss_pred eeEEEecC------CceeEEEEecCceEEE-e-------cCeEEEEEcCCceeeeEeeccCCC-----------------
Q 015650 168 CIGELSFR------SEVRSVKLRRDRIIVV-L-------EQKIFVYNFADLKLLHQIETIANP----------------- 216 (403)
Q Consensus 168 ~~~~~~~~------~~i~~~~~~~~~~~~~-~-------d~~i~i~d~~~~~~~~~~~~~~~~----------------- 216 (403)
.+..+... ..+...-...++.+++ . ++.|+.||.++|+.+..+......
T Consensus 150 ~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w 229 (677)
T 1kb0_A 150 EVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTW 229 (677)
T ss_dssp EEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTS
T ss_pred EEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccc
Confidence 99888732 1222211112555555 2 589999999999998877543221
Q ss_pred ---------------ceeEEEeeCCCeEEEEeeCCc-----------------cCeEEEEEccCCceeEE-e--ecC---
Q 015650 217 ---------------KGLCAVSQGVGSLVLVCPGLQ-----------------KGQVRVEHYASKRTKFI-M--AHD--- 258 (403)
Q Consensus 217 ---------------~~~~~~~~~~~~~~~~~~g~~-----------------d~~i~v~d~~~~~~~~~-~--~~~--- 258 (403)
...+++.++.+.+++.+ +.. -+.|..+|.++++..-. + .|.
T Consensus 230 ~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~-~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd 308 (677)
T 1kb0_A 230 DPSGKWWEAGGGGTMWDSMTFDAELNTMYVGT-GNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWD 308 (677)
T ss_dssp CGGGCHHHHCEECCCCSCEEEETTTTEEEEEC-CCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSC
T ss_pred cccCceeEeCCCcccccceeEcCCCCEEEEEC-CCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccc
Confidence 12467788877666654 211 02589999998776432 2 121
Q ss_pred ----CceEEEEEcCCC---CEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 259 ----SRIACFALTQDG---QLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 259 ----~~i~~~~~sp~g---~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
.....+....+| ..|+.++.+|. |+++|..+|+.+..+.
T Consensus 309 ~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~-l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 309 YTSTQPMILADIKIAGKPRKVILHAPKNGF-FFVLDRTNGKFISAKN 354 (677)
T ss_dssp CCCCSCCEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEE
T ss_pred cccCCCcEEEecccCCcEeeEEEEECCCCE-EEEEECCCCCEecccc
Confidence 112223333477 68899999999 9999999999987766
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.14 E-value=1.3e-08 Score=84.52 Aligned_cols=202 Identities=8% Similarity=-0.036 Sum_probs=132.4
Q ss_pred ceeEEEecCCc--eeEEEEecCceEEE--ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEE
Q 015650 167 RCIGELSFRSE--VRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVR 242 (403)
Q Consensus 167 ~~~~~~~~~~~--i~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~ 242 (403)
+.+.++.|... ...+.|+.+..++. .+|.|+++|+++++.+..+ . ........+.++++.+|+++ -.++.+.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~lt--w~~~~v~ 119 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLT--WTEGLLF 119 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEE--SSSCEEE
T ss_pred EEEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEE--ccCCEEE
Confidence 45566665443 46888885434444 3678999999999998887 3 33444455667788888775 4789999
Q ss_pred EEEccCCcee-EEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcc---cEEEEEeCCCCCEE
Q 015650 243 VEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRA---EIYSLAFSSNAQWL 318 (403)
Q Consensus 243 v~d~~~~~~~-~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~---~v~~l~~s~d~~~l 318 (403)
+||..+.+.. ++.. ...-..++ +|++.|+.+..++. |.++|..+.+.+..+....+.. .++.+.|. +|+.+
T Consensus 120 V~D~~Tl~~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~-l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ly 194 (268)
T 3nok_A 120 TWSGMPPQRERTTRY-SGEGWGLC--YWNGKLVRSDGGTM-LTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIY 194 (268)
T ss_dssp EEETTTTEEEEEEEC-SSCCCCEE--EETTEEEEECSSSE-EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEECCcCcEEEEEeC-CCceeEEe--cCCCEEEEECCCCE-EEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEE
Confidence 9999885543 4442 22223343 57888887777778 9999999999998887532222 45778886 77766
Q ss_pred EEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEE
Q 015650 319 AVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVIL 398 (403)
Q Consensus 319 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~ 398 (403)
+....++.|.+.|.++++.+..++- .++.+.... +.....+-.+.+||.|+++.|++.
T Consensus 195 anvw~s~~I~vIDp~TG~V~~~Idl----------------~~L~~~~~~------~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATGTVVGVIDA----------------SALTRAVAG------QVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp EEETTCSEEEEECTTTCBEEEEEEC----------------HHHHHHHTT------TCCCTTCCEEEEEECTTTCCEEEE
T ss_pred EEECCCCeEEEEeCCCCcEEEEEEC----------------CCCcccccc------cccCcCCceEEEEEcCCCCEEEEe
Confidence 6666788999999999985332210 000000000 000112467889999998888776
Q ss_pred c
Q 015650 399 G 399 (403)
Q Consensus 399 ~ 399 (403)
+
T Consensus 253 G 253 (268)
T 3nok_A 253 G 253 (268)
T ss_dssp E
T ss_pred C
Confidence 5
No 234
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.14 E-value=2.2e-08 Score=90.42 Aligned_cols=170 Identities=13% Similarity=0.098 Sum_probs=109.0
Q ss_pred ceEEEEECCCCceeEEEecCCceeEEEEecCceEEE-e------------cCeEEEEEcCCceeeeEeecc-------CC
Q 015650 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-L------------EQKIFVYNFADLKLLHQIETI-------AN 215 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~------------d~~i~i~d~~~~~~~~~~~~~-------~~ 215 (403)
+.|.++|..+++.+.++.....- .+.++||++.++ . ++.|.++|..+++.+..+... ..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~ 177 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGT 177 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCC
Confidence 58999999999999999833333 899999998666 2 357999999999988887643 12
Q ss_pred CceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCcee-EEeecCCceEEEEEcCCC-CEEEEEeCCCcEEEEEEcCCCcE
Q 015650 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTL 293 (403)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~-~~~~~~~~i~~~~~sp~g-~~l~s~~~dg~~i~iwd~~~~~~ 293 (403)
.-..+.++++++.+|++.. ..++.|.++|+.+.++. .+.. .+. ....|+| +.+++.+.||. +.+.+..+++.
T Consensus 178 ~P~~~~~spDGk~lyV~n~-~~~~~VsVID~~t~kvv~~I~v-~g~---~~~~p~g~~~~v~~~~dG~-~~~V~~~~~~v 251 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQF-SPAPAVGVVDLEGKTFDRMLDV-PDC---YHIFPASPTVFYMNCRDGS-LARVDFADGET 251 (426)
T ss_dssp CGGGSEECTTSSEEEEEEC-SSSCEEEEEETTTTEEEEEEEC-CSE---EEEEEEETTEEEEEETTSS-EEEEECCTTCC
T ss_pred CcceEEEcCCCCEEEEEec-CCCCeEEEEECCCCeEEEEEEc-CCc---eeeccCCCcEEEEEcCCCC-EEEEECCCCcE
Confidence 3457899999998877641 13678999999986653 3332 111 2223332 44455556666 66666644444
Q ss_pred EEE----EecCCCccc-EEEEEeCCCCCEEEEEeCCCcEEEEEeec
Q 015650 294 LQE----VRRGADRAE-IYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 294 ~~~----~~~~~~~~~-v~~l~~s~d~~~l~s~~~dg~v~iwd~~~ 334 (403)
... +... ..+ ...+.|.+++..++.....+.|.+.|+..
T Consensus 252 ~~~~~~~~~v~--~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~ 295 (426)
T 3c75_H 252 KVTNTEVFHTE--DELLINHPAFSLRSGRLVWPTYTGKIFQADLTA 295 (426)
T ss_dssp EEEECCCCSCT--TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECS
T ss_pred EEEeeeeeccC--CCceeeEeeecCCCCEEEEEeCCCcEEEEeccC
Confidence 321 1110 111 12345677777666666677777777754
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.13 E-value=9.2e-08 Score=85.99 Aligned_cols=219 Identities=11% Similarity=0.057 Sum_probs=134.8
Q ss_pred CCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecC
Q 015650 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR 175 (403)
Q Consensus 96 d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~ 175 (403)
++.+++...++.|..+|.++++......+. ... ....... ++..++.. .+ +.|..+|..+|+.+..+...
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~-~~~--~~~p~~~-~~~v~v~~-~~-----g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVA-GEA--LSRPVVS-DGLVLIHT-SN-----GQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECS-SCC--CSCCEEE-TTEEEEEC-TT-----SEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCC-Cce--EcCCEEE-CCEEEEEc-CC-----CeEEEEECCCCcEEEEEeCC
Confidence 444444444666999999988887665553 111 1111122 34444433 34 89999999999988887743
Q ss_pred Cce------eEEEEecCceEEE--ecCeEEEEEcCCceeeeEeeccCCC----------c-eeEEEeeCCCeEEEEeeCC
Q 015650 176 SEV------RSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANP----------K-GLCAVSQGVGSLVLVCPGL 236 (403)
Q Consensus 176 ~~i------~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~g~ 236 (403)
..+ ...... ++.+++ .++.|..+|..+++.+......... + ....+ .++.+++. .
T Consensus 173 ~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~---~ 246 (376)
T 3q7m_A 173 MPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFAL---A 246 (376)
T ss_dssp C-----CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEE---C
T ss_pred CCceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEE---e
Confidence 332 222333 455555 4789999999999888776532110 1 11111 23444443 3
Q ss_pred ccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCC
Q 015650 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ 316 (403)
Q Consensus 237 ~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 316 (403)
.++.+..+|.++++...... ......+.. ++..|+.++.++. |..+|..+++.+...... ....+..+.. .+.
T Consensus 247 ~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~--~~~~l~~~~~~g~-l~~~d~~tG~~~w~~~~~-~~~~~~~~~~--~~~ 319 (376)
T 3q7m_A 247 YNGNLTALDLRSGQIMWKRE-LGSVNDFIV--DGNRIYLVDQNDR-VMALTIDGGVTLWTQSDL-LHRLLTSPVL--YNG 319 (376)
T ss_dssp TTSCEEEEETTTCCEEEEEC-CCCEEEEEE--ETTEEEEEETTCC-EEEEETTTCCEEEEECTT-TTSCCCCCEE--ETT
T ss_pred cCcEEEEEECCCCcEEeecc-CCCCCCceE--ECCEEEEEcCCCe-EEEEECCCCcEEEeeccc-CCCcccCCEE--ECC
Confidence 67899999998876543322 223444444 4667888888999 999999999987666521 1122222233 356
Q ss_pred EEEEEeCCCcEEEEEeecCCC
Q 015650 317 WLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 317 ~l~s~~~dg~v~iwd~~~~~~ 337 (403)
.|+.++.+|.|+++|.++++.
T Consensus 320 ~l~v~~~~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 320 NLVVGDSEGYLHWINVEDGRF 340 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEeCCCeEEEEECCCCcE
Confidence 788889999999999999873
No 236
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.13 E-value=1.3e-07 Score=85.03 Aligned_cols=222 Identities=9% Similarity=0.083 Sum_probs=135.6
Q ss_pred CCEEEEEc-CCcEEEEEcCCCeeEEEEecccCc------ceeE-EEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCce
Q 015650 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGG------GIGV-VEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC 168 (403)
Q Consensus 97 ~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~------~~~v-~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~ 168 (403)
+..|.+++ ++.|..||.++++......+.... ...+ ..+....+..++.+ .+ +.|..+|..+|+.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~--~~-----g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGS--EK-----AQVYALNTSDGTV 125 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEE--TT-----SEEEEEETTTCCE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEc--CC-----CEEEEEECCCCCE
Confidence 44555555 556999999888887666553110 1222 23334444444433 33 8999999999998
Q ss_pred eEEEecCCcee-EEEEecCceEEE--ecCeEEEEEcCCceeeeEeeccCCCc-----eeEEEeeCCCeEEEEeeCCccCe
Q 015650 169 IGELSFRSEVR-SVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPK-----GLCAVSQGVGSLVLVCPGLQKGQ 240 (403)
Q Consensus 169 ~~~~~~~~~i~-~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~d~~ 240 (403)
+..+.....+. ..... ++.+++ .++.|+.+|.++++.+..+....... ....+. ++.+++ +..++.
T Consensus 126 ~W~~~~~~~~~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~---g~~~g~ 199 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVS-DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVV---GGDNGR 199 (376)
T ss_dssp EEEEECSSCCCSCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEE---CCTTTE
T ss_pred EEEEeCCCceEcCCEEE-CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEE---EcCCCE
Confidence 88777433332 22333 455555 48899999999999887775432211 122222 333333 346789
Q ss_pred EEEEEccCCceeEEeecCCc-----eE---EEEEcC--CCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEE
Q 015650 241 VRVEHYASKRTKFIMAHDSR-----IA---CFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLA 310 (403)
Q Consensus 241 i~v~d~~~~~~~~~~~~~~~-----i~---~~~~sp--~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 310 (403)
+..+|..+++..-......+ +. .+.-.| .+..++.++.++. |..+|.++++.+..... .....+.
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~-l~~~d~~tG~~~w~~~~----~~~~~~~ 274 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN-LTALDLRSGQIMWKREL----GSVNDFI 274 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC-EEEEETTTCCEEEEECC----CCEEEEE
T ss_pred EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE-EEEEECCCCcEEeeccC----CCCCCce
Confidence 99999988665433221110 00 011111 3456777888898 99999999998866653 2344444
Q ss_pred eCCCCCEEEEEeCCCcEEEEEeecCCCC
Q 015650 311 FSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (403)
Q Consensus 311 ~s~d~~~l~s~~~dg~v~iwd~~~~~~~ 338 (403)
. ++..|+.++.++.|..+|..+++..
T Consensus 275 ~--~~~~l~~~~~~g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 275 V--DGNRIYLVDQNDRVMALTIDGGVTL 300 (376)
T ss_dssp E--ETTEEEEEETTCCEEEEETTTCCEE
T ss_pred E--ECCEEEEEcCCCeEEEEECCCCcEE
Confidence 4 4667888888999999999998853
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.11 E-value=1.7e-08 Score=93.43 Aligned_cols=184 Identities=11% Similarity=0.036 Sum_probs=129.5
Q ss_pred CeEEEeeC-CCCCCCCCceEEEEECCCCceeEEEe--cCCceeEEEE-e-cCceEEE-e--------------------c
Q 015650 140 NILALVGG-GPDPQYPLNKVMIWDDHQSRCIGELS--FRSEVRSVKL-R-RDRIIVV-L--------------------E 193 (403)
Q Consensus 140 ~~~~~~s~-~~d~~~~~~~i~iwd~~~~~~~~~~~--~~~~i~~~~~-~-~~~~~~~-~--------------------d 193 (403)
|+.++... ..+ +.|.+.|+.+.++.+.+. ....+..+++ . |++.+++ . +
T Consensus 100 DG~~lfVnd~~~-----~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 100 DGRFLFMNDKAN-----TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEETTT-----TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred CCCEEEEEcCCC-----CEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 55554443 334 789999999999888555 4566888887 4 8887776 2 2
Q ss_pred CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCcc-----------------------------------
Q 015650 194 QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK----------------------------------- 238 (403)
Q Consensus 194 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d----------------------------------- 238 (403)
+.+.++|..+.+...++.... .-..++++++++..++.+..++.
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred ceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 479999999999988887644 34678899999887776633211
Q ss_pred CeEEEEEccC--Cce--eEEeecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCc------------EEEEEecCC
Q 015650 239 GQVRVEHYAS--KRT--KFIMAHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGT------------LLQEVRRGA 301 (403)
Q Consensus 239 ~~i~v~d~~~--~~~--~~~~~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~------------~~~~~~~~~ 301 (403)
+.|.+.|.++ +.. ..+.. .....++.++|||+++++++. +.+ |.++|+.+.+ ....+..
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~-VsVid~~~~~~~~~~~l~~~~~v~~~v~v-- 329 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPT-VTVLDVTRFDAVFYENADPRSAVVAEPEL-- 329 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSB-EEEEEGGGHHHHHHSCCCGGGGEEECCBC--
T ss_pred CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCe-EEEEECcccccccccccCcccceEEEcCC--
Confidence 2356666665 222 22322 234578999999999877665 556 9999998653 4445543
Q ss_pred CcccEEEEEeCCCCCEEEEEeCCCcEEEEEeec
Q 015650 302 DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 302 ~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~ 334 (403)
......++|++||...++.-.|+.|.+||+++
T Consensus 330 -G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 -GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp -CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred -CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 25688999999994344555899999999988
No 238
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.10 E-value=4.7e-09 Score=93.23 Aligned_cols=89 Identities=7% Similarity=-0.049 Sum_probs=69.7
Q ss_pred eEEEEECCCCceeEEEe-cCCceeEEEEecCceEEE-e------------cCeEEEEEcCCceeeeEeeccC-------C
Q 015650 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV-L------------EQKIFVYNFADLKLLHQIETIA-------N 215 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~------------d~~i~i~d~~~~~~~~~~~~~~-------~ 215 (403)
.|.++|..+++.+.++. ...+ .+.++||++.++ . ++.|.+||+.+++.+.++.... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 88899999999999998 4444 899999998766 3 4689999999999999986541 2
Q ss_pred CceeEEEeeCCCeEEEEeeCCccCeEEE--EEccC
Q 015650 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRV--EHYAS 248 (403)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~g~~d~~i~v--~d~~~ 248 (403)
.-..++++|+++.+|++..+ ....+.+ +|..+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~-~~~~v~V~~iD~~t 158 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFG-SSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSEEECTTSSCEEEEECS-SSCEEEEEETTTEE
T ss_pred CcceEEEcCCCCEEEEEccC-CCCeEEEEEEchhh
Confidence 34689999999988876522 2456777 88765
No 239
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.10 E-value=4.7e-08 Score=81.10 Aligned_cols=190 Identities=12% Similarity=0.153 Sum_probs=127.7
Q ss_pred EecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCcee--EEEEecCceEEEe--cCeEE
Q 015650 122 RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVR--SVKLRRDRIIVVL--EQKIF 197 (403)
Q Consensus 122 ~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~--d~~i~ 197 (403)
.++......-...+.|+. +.++.+.+.+ ....|+++|+++++.+..+....... .+++..+..+++. ++.+.
T Consensus 35 ~~~phd~~~ftqGL~~~~-~~LyestG~~---g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 35 HSYPHDTKAFTEGFFYRN-GYFYESTGLN---GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEECCTTCEEEEEEEET-TEEEEEEEET---TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEecCCCCcccceEEEEC-CEEEEECCCC---CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence 444422334457788884 4555555544 00389999999999999988544543 4566656555554 88999
Q ss_pred EEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce-eEEee--cC---CceEEEEEcCCCC
Q 015650 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMA--HD---SRIACFALTQDGQ 271 (403)
Q Consensus 198 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~~--~~---~~i~~~~~sp~g~ 271 (403)
+||.++.+.+.++.... ....++++++.+++. .| ++.|.++|..+.++ ..+.. .. ..++.+.|. +|+
T Consensus 111 v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~S-dG--s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ 183 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMS-DG--TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE 183 (262)
T ss_dssp EEETTTCCEEEEEECSS---CCCCEEECSSCEEEC-CS--SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEECccCcEEEEEECCC---CceEEecCCCEEEEE-CC--CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE
Confidence 99999999999987543 224555777765543 23 57899999987443 33332 12 334567776 776
Q ss_pred EEEEEeCCCcEEEEEEcCCCcEEEEEecCCC----------cccEEEEEeCCCCCEEEEEeC
Q 015650 272 LLATSSTKGTLVRIFNTLDGTLLQEVRRGAD----------RAEIYSLAFSSNAQWLAVSSD 323 (403)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~----------~~~v~~l~~s~d~~~l~s~~~ 323 (403)
+.+..-.++. |.+.|.++++.+..+....- ....+.|+|+|+++.|++.+.
T Consensus 184 lyan~w~~~~-I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 184 IFANVWQTNK-IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEETTSSE-EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEEccCCe-EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 5544445666 99999999999998875311 135689999999888776663
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.09 E-value=1.3e-07 Score=91.72 Aligned_cols=192 Identities=14% Similarity=0.112 Sum_probs=115.6
Q ss_pred CCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcce-------e-EEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc
Q 015650 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI-------G-VVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (403)
Q Consensus 96 d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~-------~-v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~ 167 (403)
++.+++++.++.|..+|..+++.+........... . ...+....+ ..++ +..+ +.|..+|.++|+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~v~v-~~~d-----g~l~AlDa~TG~ 142 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKG-KVYV-GVLD-----GRLEAIDAKTGQ 142 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETT-EEEE-ECTT-----SEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECC-EEEE-EccC-----CEEEEEECCCCC
Confidence 44444444456699999999988876554311100 0 011222333 3333 3345 899999999999
Q ss_pred eeEEEecC-C--ceeEEEEec---CceEEE-e-------cCeEEEEEcCCceeeeEeeccC-------------------
Q 015650 168 CIGELSFR-S--EVRSVKLRR---DRIIVV-L-------EQKIFVYNFADLKLLHQIETIA------------------- 214 (403)
Q Consensus 168 ~~~~~~~~-~--~i~~~~~~~---~~~~~~-~-------d~~i~i~d~~~~~~~~~~~~~~------------------- 214 (403)
.+..+... . ....+...| ++.+++ . ++.|+.||.++|+.+..+....
T Consensus 143 ~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 143 RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred EeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 98877632 1 111111122 566666 2 5799999999999988775311
Q ss_pred ------------CCceeEEEeeCCCeEEEEeeCCccC-------------------eEEEEEccCCceeEE-ee--cC--
Q 015650 215 ------------NPKGLCAVSQGVGSLVLVCPGLQKG-------------------QVRVEHYASKRTKFI-MA--HD-- 258 (403)
Q Consensus 215 ------------~~~~~~~~~~~~~~~~~~~~g~~d~-------------------~i~v~d~~~~~~~~~-~~--~~-- 258 (403)
.....+++.++.+.+++.+ .++ .|..+|.++++..-. +. |.
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~---~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~w 299 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPELNLLYIGV---GNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAW 299 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETTTTEEEEEC---CCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCS
T ss_pred CCceeeecCCCCccccceeEcCCCCEEEEeC---CCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccc
Confidence 0112467777777655543 233 499999998776432 22 22
Q ss_pred -----CceEEEEEcCCCC---EEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 259 -----SRIACFALTQDGQ---LLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 259 -----~~i~~~~~sp~g~---~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
..+.......+|+ .++.++.+|. ++++|.++|+.+....
T Consensus 300 d~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 300 DYTATQHMILAELPIDGKPRKVLMQAPKNGF-FYVIDRATGELLSAKG 346 (689)
T ss_dssp CCCCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEE
T ss_pred cccCCCCcEEEeeccCCcEEEEEEEECCCCe-EEEEECCCCCEecccc
Confidence 1122222223665 7889999999 9999999999885443
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.08 E-value=4.9e-07 Score=77.04 Aligned_cols=216 Identities=5% Similarity=-0.090 Sum_probs=136.1
Q ss_pred CCeEEEEEcCCCCEEEEEc--CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCC-eEEEeeCCCCCCCCCceEEEEE
Q 015650 86 PTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMIWD 162 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~--~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~~~~~~i~iwd 162 (403)
..+..++|++++..|..+. .+.|.+++.+..... ..+. ........++++++ +.++++.... +.|.+++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~-~~~~~p~~ia~d~~~~~lyv~d~~~-----~~I~~~~ 107 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIR-QDLGSPEGIALDHLGRTIFWTDSQL-----DRIEVAK 107 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEEC-TTCCCEEEEEEETTTTEEEEEETTT-----TEEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE--EEEE-CCCCCccEEEEEecCCeEEEEECCC-----CEEEEEE
Confidence 3567899999776666554 344999998765432 2222 22245677888863 4555555444 7899999
Q ss_pred CCCCceeEEEe-cCCceeEEEEecC-ceEEEe-----cCeEEEEEcCCceeeeEee-ccCCCceeEEEeeCCCeEEEEee
Q 015650 163 DHQSRCIGELS-FRSEVRSVKLRRD-RIIVVL-----EQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCP 234 (403)
Q Consensus 163 ~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~~-----d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (403)
+.......... .......++++|+ +.+.+. .+.|..+++.. +....+. ........++++++++.+|++.
T Consensus 108 ~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d- 185 (267)
T 1npe_A 108 MDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVD- 185 (267)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEE-
T ss_pred cCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEE-
Confidence 76443222222 2256789999995 554443 25788888753 3333332 2223446789999888887775
Q ss_pred CCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCC
Q 015650 235 GLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (403)
Q Consensus 235 g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 313 (403)
...+.|.++|........+.........++.. +..|+.+.. .+. |.++|..+++.+..+..+. ......|++.|
T Consensus 186 -~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~-v~~~d~~~g~~~~~i~~g~-~~~p~gi~~~~ 260 (267)
T 1npe_A 186 -AGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNS-VIAMDLAISKEMDTFHPHK-QTRLYGITIAL 260 (267)
T ss_dssp -TTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTE-EEEEETTTTEEEEEECCSS-CCCCCCEEEEC
T ss_pred -CCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCe-EEEEeCCCCCceEEEcccc-ccccceeeecC
Confidence 34679999999875544433333344667664 455555554 566 9999999999988887431 12467788887
Q ss_pred CCC
Q 015650 314 NAQ 316 (403)
Q Consensus 314 d~~ 316 (403)
++.
T Consensus 261 ~~~ 263 (267)
T 1npe_A 261 SQC 263 (267)
T ss_dssp SCC
T ss_pred ccC
Confidence 764
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.06 E-value=4.2e-07 Score=79.77 Aligned_cols=236 Identities=9% Similarity=0.042 Sum_probs=146.0
Q ss_pred CeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEeccc----------------CcceeEEEEeeeC-CeEEEeeCC
Q 015650 87 TLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFER----------------GGGIGVVEMLFRC-NILALVGGG 148 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~----------------~~~~~v~~~~~~~-~~~~~~s~~ 148 (403)
...+++|.++|.++.++. ++.|..|+..+........... ........+++.+ ++.++++..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 345678999998676666 4558888876543321111000 0112467888886 666555543
Q ss_pred CCCCCCCceEEEEECCCCceeEEEe------cCCceeEEEEec-CceEEEec--------------------CeEEEEEc
Q 015650 149 PDPQYPLNKVMIWDDHQSRCIGELS------FRSEVRSVKLRR-DRIIVVLE--------------------QKIFVYNF 201 (403)
Q Consensus 149 ~d~~~~~~~i~iwd~~~~~~~~~~~------~~~~i~~~~~~~-~~~~~~~d--------------------~~i~i~d~ 201 (403)
. +.|..+|..+++. ..+. .......+++.+ +|.+.+.| +.|+.||.
T Consensus 100 ~------~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 100 Y------YHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp T------TEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred C------CCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 3 3488888765542 2222 113467899999 88777642 56888998
Q ss_pred CCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCC---ceeEEeecCCceEEEEEcCCCCEEEEEeC
Q 015650 202 ADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQDGQLLATSST 278 (403)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~---~~~~~~~~~~~i~~~~~sp~g~~l~s~~~ 278 (403)
.+++....... ......++++++++.++++- ...+.|.+|++... ....+....+ ...++++++|++.++...
T Consensus 173 ~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d--~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 173 STKETTLLLKE-LHVPGGAEVSADSSFVLVAE--FLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TTTEEEEEEEE-ESCCCEEEECTTSSEEEEEE--GGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEeccC-CccCcceEECCCCCEEEEEe--CCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecC
Confidence 76654333222 22335689999988777764 34678999998752 2233222233 788999999987766544
Q ss_pred ----------CCcEEEEEEcCCCcEEEEEecCCC--cccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 279 ----------KGTLVRIFNTLDGTLLQEVRRGAD--RAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 279 ----------dg~~i~iwd~~~~~~~~~~~~~~~--~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
.+. |..+|. .++.+..+..... ...+..+++ .+++++++....+.|..+++....
T Consensus 249 ~~~~~~~~~~~~~-v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 249 ELDGNMHGRVDPK-GIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp ETTSSTTSCEEEE-EEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC----
T ss_pred cccccccCCCccE-EEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccccc
Confidence 356 888885 5888777764311 234666776 466656665678889999987554
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.05 E-value=3.8e-07 Score=75.70 Aligned_cols=186 Identities=10% Similarity=0.074 Sum_probs=125.9
Q ss_pred EecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeE--EEEecCceEEEe--cCeEE
Q 015650 122 RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRS--VKLRRDRIIVVL--EQKIF 197 (403)
Q Consensus 122 ~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~--d~~i~ 197 (403)
.++..........+.|+.+.++ ++.+.+ |.|+++|+++++.+..+ ....... +++..+..+++. ++.+.
T Consensus 47 ~~~phd~~~ftqGL~~~~~~Ly-~stG~~-----g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 47 REYPHATNAFTQGLVFHQGHFF-ESTGHQ-----GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEECCTTCCEEEEEEETTEEE-EEETTT-----TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEcCCCccccceEEEECCEEE-EEcCCC-----CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEE
Confidence 3444223344567888865544 455555 78999999999998887 5555544 666666666664 89999
Q ss_pred EEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce-eEEee--cCC---ceEEEEEcCCCC
Q 015650 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMA--HDS---RIACFALTQDGQ 271 (403)
Q Consensus 198 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~~--~~~---~i~~~~~sp~g~ 271 (403)
+||.++++.+.++...... ..++++++.+++.. | ++.|.++|..+.++ ..+.. +.. .++.+.|. +|+
T Consensus 120 V~D~~Tl~~~~ti~~~~eG---wGLt~Dg~~L~vSd-G--s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEG---WGLCYWNGKLVRSD-G--GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp EEETTTTEEEEEEECSSCC---CCEEEETTEEEEEC-S--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEECCcCcEEEEEeCCCce---eEEecCCCEEEEEC-C--CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE
Confidence 9999999999998754332 34457777665543 3 68999999888543 33332 222 34667776 776
Q ss_pred EEEEEeCCCcEEEEEEcCCCcEEEEEecCC-----------CcccEEEEEeCCCCCEEEEEe
Q 015650 272 LLATSSTKGTLVRIFNTLDGTLLQEVRRGA-----------DRAEIYSLAFSSNAQWLAVSS 322 (403)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~s~d~~~l~s~~ 322 (403)
+.+..-.+.. |.+.|.++++.+..+.... .....+.|+|+|+++.|++.+
T Consensus 193 lyanvw~s~~-I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 193 IYANIWHSSD-VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEETTCSE-EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCe-EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 4444434666 9999999999999887421 113678999999877665554
No 244
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.04 E-value=2.9e-10 Score=102.04 Aligned_cols=183 Identities=13% Similarity=0.052 Sum_probs=93.7
Q ss_pred CCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEec
Q 015650 96 DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (403)
Q Consensus 96 d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~ 174 (403)
++..|++++ ++.|+.||..+++....... ..+.+..+..++..++.++.| +.|+.||.++|+.+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-----CCEEECTTT-----CCEEEC-----CCSEECSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEcCCCEEEEeCCC-----CEEEEEECCCCceeeeeec
Confidence 456677766 55699999999888754433 122233333455556666666 9999999999987766542
Q ss_pred C--Ccee-EEEEecCceEEE--ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCC
Q 015650 175 R--SEVR-SVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK 249 (403)
Q Consensus 175 ~--~~i~-~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~ 249 (403)
. ..+. ...+..++.+++ .++.|+.||.++|+.+..+..+. ...++|+++.+++. +.++.|+.||.+++
T Consensus 78 ~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~---~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 78 TIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLG---RTEYTITMYDTKTR 150 (369)
T ss_dssp CHHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------------------EEEE---EEEEEEECCCSSSS
T ss_pred cCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEE---ecCCEEEEEECCCC
Confidence 1 1111 111113444433 58899999999999888776543 23445555544433 47899999999886
Q ss_pred cee-EEeecCCceEEEEEcCCC---CEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 250 RTK-FIMAHDSRIACFALTQDG---QLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 250 ~~~-~~~~~~~~i~~~~~sp~g---~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
+.. .+..+. .....++.+. ..+++++.+|. |+.||..+|+.+-.+.
T Consensus 151 ~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~-v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 151 ELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGL-VVTVDSESGDVLWIQN 200 (369)
T ss_dssp SCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCE-EEEECTTTCCEEEEEE
T ss_pred CEEEeEeccc--ccCccccCCccccceEEEECCCCE-EEEEECCCCcEEEEec
Confidence 542 222111 1223334332 45677888999 9999999999877766
No 245
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=6.4e-11 Score=106.30 Aligned_cols=167 Identities=12% Similarity=0.023 Sum_probs=92.6
Q ss_pred ceEEEEECCCCceeEEEecCCceeEEEEecCceEEE---ecCeEEEEEcCCceeeeEeeccCCC-c-eeEEEeeCCCeEE
Q 015650 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANP-K-GLCAVSQGVGSLV 230 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 230 (403)
+.|+.||..+|+.+..+.. ..+.+..+..++.+++ .|+.|+.||.++|+.+..+..+... + ....+. .++.
T Consensus 19 g~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~-- 94 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGI-- 94 (369)
T ss_dssp SEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC--------
T ss_pred CEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCE--
Confidence 8999999999999988876 5565555556664444 4899999999998877665432110 0 001111 2222
Q ss_pred EEeeCCccCeEEEEEccCCceeE-EeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEE
Q 015650 231 LVCPGLQKGQVRVEHYASKRTKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSL 309 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~~~~~~-~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l 309 (403)
++ .|+.++.|+.||.++++... +..+. ...++|++..|++++.++. |+.||.++|+.+..+... .....
T Consensus 95 v~-~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~-v~a~d~~tG~~~W~~~~~----~~~~~ 164 (369)
T 2hz6_A 95 LY-MGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYT-ITMYDTKTRELRWNATYF----DYAAS 164 (369)
T ss_dssp CC-CCEEEEEEEEECCC--------------------------EEEEEEEEE-EECCCSSSSSCCCEEEEE----EECCB
T ss_pred EE-EEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCE-EEEEECCCCCEEEeEecc----cccCc
Confidence 22 24578999999999866533 22222 2356678889999999999 999999999876665421 12233
Q ss_pred EeCCCC---CEEEEEeCCCcEEEEEeecCC
Q 015650 310 AFSSNA---QWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 310 ~~s~d~---~~l~s~~~dg~v~iwd~~~~~ 336 (403)
.+..+. ..+++++.||.|+.||.++++
T Consensus 165 ~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 165 LPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp CCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred cccCCccccceEEEECCCCEEEEEECCCCc
Confidence 344432 457778899999999999987
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.02 E-value=4.1e-08 Score=86.41 Aligned_cols=219 Identities=12% Similarity=0.025 Sum_probs=141.8
Q ss_pred CCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEe-
Q 015650 96 DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS- 173 (403)
Q Consensus 96 d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~- 173 (403)
++. |.+++ +++|..++.. ++....... ....+..+....++..+++. .+ +.|..+|.. ++.+..+.
T Consensus 107 ~~~-l~v~t~~~~l~~~d~~-g~~~~~~~~---~~~~~~~~~~~~~g~l~vgt-~~-----~~l~~~d~~-g~~~~~~~~ 174 (330)
T 3hxj_A 107 EDI-LYVTSMDGHLYAINTD-GTEKWRFKT---KKAIYATPIVSEDGTIYVGS-ND-----NYLYAINPD-GTEKWRFKT 174 (330)
T ss_dssp TTE-EEEECTTSEEEEECTT-SCEEEEEEC---SSCCCSCCEECTTSCEEEEC-TT-----SEEEEECTT-SCEEEEEEC
T ss_pred CCE-EEEEecCCEEEEEcCC-CCEEEEEcC---CCceeeeeEEcCCCEEEEEc-CC-----CEEEEECCC-CCEeEEEec
Confidence 444 44555 6679999987 555443333 22233444555555555544 33 789999988 88777776
Q ss_pred cCCceeEEEEecCceEEEecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeE
Q 015650 174 FRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKF 253 (403)
Q Consensus 174 ~~~~i~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~ 253 (403)
....+.++...+++.+.+..+.|..+| .+++.+..+......+..+.+..++ .+++++ .++.|..+|........
T Consensus 175 ~~~~~~~~~~d~~g~l~v~t~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t---~~~gl~~~~~~g~~~~~ 249 (330)
T 3hxj_A 175 NDAITSAASIGKDGTIYFGSDKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG-TIYVTS---LDGHLYAINPDGTEKWR 249 (330)
T ss_dssp SSCCCSCCEECTTCCEEEESSSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS-CEEEEE---TTTEEEEECTTSCEEEE
T ss_pred CCCceeeeEEcCCCEEEEEeCEEEEEC-CCCcEEEEEccCCcceeceEECCCC-eEEEEc---CCCeEEEECCCCCEeEE
Confidence 455677788877777666339999999 7777777666555556666666554 444443 46778888765555555
Q ss_pred EeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEee
Q 015650 254 IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 254 ~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~ 333 (403)
+......+..+.+.+++. |+.++.++. |..+|. +++.+..+.. ....+.++...++|. |..++.+|.+++...+
T Consensus 250 ~~~~~~~~~~~~~~~~g~-l~v~t~~gg-l~~~d~-~g~~~~~~~~--~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 250 FKTGKRIESSPVIGNTDT-IYFGSYDGH-LYAINP-DGTEKWNFET--GSWIIATPVIDENGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp EECSSCCCSCCEECTTSC-EEEECTTCE-EEEECT-TSCEEEEEEC--SSCCCSCCEECTTCC-EEEECTTSCEEEEEC-
T ss_pred eeCCCCccccceEcCCCe-EEEecCCCC-EEEECC-CCcEEEEEEc--CCccccceEEcCCCE-EEEEcCCCeEEEEecc
Confidence 544444455566766665 666788888 999995 7887776664 335677788878876 4558889999998877
Q ss_pred cCCC
Q 015650 334 VNSG 337 (403)
Q Consensus 334 ~~~~ 337 (403)
..+.
T Consensus 324 ~~~~ 327 (330)
T 3hxj_A 324 EHHH 327 (330)
T ss_dssp ----
T ss_pred cccc
Confidence 6553
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.02 E-value=5.9e-07 Score=73.93 Aligned_cols=189 Identities=15% Similarity=0.167 Sum_probs=127.4
Q ss_pred EecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCcee--EEEEecCceEEEe--cCeEE
Q 015650 122 RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVR--SVKLRRDRIIVVL--EQKIF 197 (403)
Q Consensus 122 ~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~--d~~i~ 197 (403)
..+..........+.|+++.++..++... ...|+.+|+.+++.+..+....... .+++..+..+.+. ++.+.
T Consensus 13 ~~~phd~~~ftqGL~~~~~~LyestG~~g----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 13 KRYPHDTTAFTEGLFYLRGHLYESTGETG----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEECCTTCCEEEEEEETTEEEEEECCTT----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEcCCCCccccccEEEECCEEEEECCCCC----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEE
Confidence 44442344556788888865555544421 1489999999999999988544443 4555555555553 89999
Q ss_pred EEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce-eEEee--cC---CceEEEEEcCCCC
Q 015650 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMA--HD---SRIACFALTQDGQ 271 (403)
Q Consensus 198 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~~--~~---~~i~~~~~sp~g~ 271 (403)
+||.++.+.+.++..... ...+.++++.+++.- | ++.|.++|..+.+. ..+.- +. ..++.+.+. +|+
T Consensus 89 v~D~~tl~~~~ti~~~~~---Gwglt~dg~~L~vSd-g--s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 89 VYDLATLTPRARFRYPGE---GWALTSDDSHLYMSD-G--TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEETTTTEEEEEEECSSC---CCEEEECSSCEEEEC-S--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEECCcCcEEEEEeCCCC---ceEEeeCCCEEEEEC-C--CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE
Confidence 999999999999875433 345557777665543 3 67899999888443 33332 22 234566665 666
Q ss_pred EEEEEeCCCcEEEEEEcCCCcEEEEEecCC-----------CcccEEEEEeCCCCCEEEEEe
Q 015650 272 LLATSSTKGTLVRIFNTLDGTLLQEVRRGA-----------DRAEIYSLAFSSNAQWLAVSS 322 (403)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~s~d~~~l~s~~ 322 (403)
+++..-.+.. |.+.|.++++.+..+.... .....+.|+++|+++.|++.+
T Consensus 162 lyanvw~s~~-I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 162 LLANVWLTSR-IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEETTTTE-EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCe-EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 5544434566 9999999999999887431 123678999999888776665
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.01 E-value=1.3e-08 Score=89.62 Aligned_cols=214 Identities=13% Similarity=0.073 Sum_probs=134.3
Q ss_pred EEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeE
Q 015650 91 ISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIG 170 (403)
Q Consensus 91 i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~ 170 (403)
+.+..+|.+.+...+++|..|| .+++... ... .....+.++....++..+++.. + |..+|. +++.+.
T Consensus 25 ~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~--~~~-~~~~~~~~~~~~~~g~l~v~t~-------~-l~~~d~-~g~~~~ 91 (330)
T 3hxj_A 25 PILAKNGTIYLGSSNKNLYAIN-TDGSVKW--FFK-SGEIIECRPSIGKDGTIYFGSD-------K-VYAINP-DGTEKW 91 (330)
T ss_dssp CEECTTSCEECSSTTTTTEEEC-TTSCEEE--SSC-GGGEEEECCEETTTTEECCSSC-------E-EEEECC-CGGGGG
T ss_pred ceEccCCeEEEEcCCCEEEEEC-CCCcEEE--EEe-cCCCcccceEEecCCcEEEecC-------c-EEEECC-CCcEEE
Confidence 4455667665554577799999 6666543 332 2334456666666777666543 6 888885 666554
Q ss_pred EEe-cCCceeEEEEecCceEEE-e-cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEcc
Q 015650 171 ELS-FRSEVRSVKLRRDRIIVV-L-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (403)
Q Consensus 171 ~~~-~~~~i~~~~~~~~~~~~~-~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~ 247 (403)
.+. .........+. ++.+.+ . ++.|+.+|.. ++...........+..+....++. +++. ..++.|..+|..
T Consensus 92 ~~~~~~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vg---t~~~~l~~~d~~ 165 (330)
T 3hxj_A 92 RFDTKKAIVSDFTIF-EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVG---SNDNYLYAINPD 165 (330)
T ss_dssp GSCC-----CCEEEE-TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEE---CTTSEEEEECTT
T ss_pred EEECCCCcccCceEE-CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEE---cCCCEEEEECCC
Confidence 444 22222333344 555554 3 7899999988 777766655544455555554443 4443 356899999988
Q ss_pred CCceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcE
Q 015650 248 SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTV 327 (403)
Q Consensus 248 ~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v 327 (403)
.............+.++.+.++|.+++ ++ +. |..+| .+++.+..+.. ....+.++...++|.++ .++.++.|
T Consensus 166 g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~-l~~~d-~~g~~~~~~~~--~~~~~~~~~~~~~g~l~-v~t~~~gl 237 (330)
T 3hxj_A 166 GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DK-VYAIN-PDGTEKWNFYA--GYWTVTRPAISEDGTIY-VTSLDGHL 237 (330)
T ss_dssp SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SS-EEEEC-TTSCEEEEECC--SSCCCSCCEECTTSCEE-EEETTTEE
T ss_pred CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CE-EEEEC-CCCcEEEEEcc--CCcceeceEECCCCeEE-EEcCCCeE
Confidence 333344444455677788888887555 44 66 99999 78887766653 33567888888887654 45567777
Q ss_pred EEEE
Q 015650 328 HVFN 331 (403)
Q Consensus 328 ~iwd 331 (403)
..++
T Consensus 238 ~~~~ 241 (330)
T 3hxj_A 238 YAIN 241 (330)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7776
No 249
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.01 E-value=1.5e-06 Score=86.12 Aligned_cols=234 Identities=10% Similarity=0.124 Sum_probs=150.8
Q ss_pred eEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc
Q 015650 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (403)
Q Consensus 88 i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~ 167 (403)
|.++...++|.+.+...+++|..|+..+.+... .........+.++....++.+.++... +-|.+||..+++
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~--~~~~~~~~~i~~i~~d~~g~lwigt~~------~Gl~~~~~~~~~ 246 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEK--VIPILGTKQIQAILQQSPTRIWVATEG------AGLFLINPKTKE 246 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEE--CC----CCCEEEEEEEETTEEEEEEBS------SCEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEE--ecCCCCCCeeEEEEEcCCCCEEEEECC------CCeEEEeCCCCe
Confidence 888888888877775445689999976654331 111123456778887777666665433 348899977665
Q ss_pred eeEEEec---------CCceeEEEEecCceEEE-ecCeEEEEEcCCceeeeEeec-------cCCCceeEEEeeCCCeEE
Q 015650 168 CIGELSF---------RSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIET-------IANPKGLCAVSQGVGSLV 230 (403)
Q Consensus 168 ~~~~~~~---------~~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 230 (403)
.. .+.+ ...|.++...++|.+.+ +++-|.+||..+++....... ....+..+....++ .++
T Consensus 247 ~~-~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~lW 324 (795)
T 4a2l_A 247 IK-NYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG-GMW 324 (795)
T ss_dssp EE-EECCCTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS-CEE
T ss_pred EE-EeecCCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc-CEE
Confidence 43 2321 35688999988887666 666899999877654332211 12344555555544 344
Q ss_pred EEeeCCccCeEEEEEccCCceeEEee-------cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEec----
Q 015650 231 LVCPGLQKGQVRVEHYASKRTKFIMA-------HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR---- 299 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~~~~~~~~~-------~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~---- 299 (403)
+.+ .++-|..|+........+.. ....|.++..+++|. |..|+.++. |..||..+++.......
T Consensus 325 igt---~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~G-l~~~~~~~~~~~~~~~~~~~~ 399 (795)
T 4a2l_A 325 LGT---YFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGG-LNLYNPITQRFTSYTLQEDES 399 (795)
T ss_dssp EEE---SSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSC-EEEECTTTCCEEEECCC----
T ss_pred EEE---CCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCC-eEEEcCCCCcEEEEecCCCCc
Confidence 443 55778888877665544432 234689999998887 455777777 99999877665432211
Q ss_pred --CCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 300 --GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 300 --~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
......|.++...++|+.|..|+.++-|.+||.++++
T Consensus 400 ~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 400 ARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp --CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred ccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 0123579999998898856667777779999987765
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.97 E-value=4.5e-07 Score=74.63 Aligned_cols=204 Identities=10% Similarity=0.061 Sum_probs=132.4
Q ss_pred ceeEEEecCC--ceeEEEEecCceEEEe----cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCe
Q 015650 167 RCIGELSFRS--EVRSVKLRRDRIIVVL----EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQ 240 (403)
Q Consensus 167 ~~~~~~~~~~--~i~~~~~~~~~~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~ 240 (403)
+.+.++.|.. -...+.|+.+..+... ++.|+.+|+.+++.+..+..... .....+...++.++.++ -.++.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~lt--w~~~~ 86 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLT--WRNHE 86 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEE--SSSSE
T ss_pred EEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEE--eeCCE
Confidence 4566777644 4568999874333332 24899999999999888865433 34445566678887775 47899
Q ss_pred EEEEEccCCcee-EEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCc---ccEEEEEeCCCCC
Q 015650 241 VRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR---AEIYSLAFSSNAQ 316 (403)
Q Consensus 241 i~v~d~~~~~~~-~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~s~d~~ 316 (403)
+.+||..+.+.. ++.. ...-..++ +++..|+.+..++. |.++|..+.+.+..+....+. ..++.+.|. +|+
T Consensus 87 v~v~D~~tl~~~~ti~~-~~~Gwglt--~dg~~L~vSdgs~~-l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRY-PGEGWALT--SDDSHLYMSDGTAV-IRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEEEETTTTEEEEEEEC-SSCCCEEE--ECSSCEEEECSSSE-EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEECCcCcEEEEEeC-CCCceEEe--eCCCEEEEECCCCe-EEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE
Confidence 999999885543 4432 22223444 57777777666777 999999999999888753222 245677775 777
Q ss_pred EEEEEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEE
Q 015650 317 WLAVSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVV 396 (403)
Q Consensus 317 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~ 396 (403)
.++....+..|.+.|.++++.+..++.. ++.+.... . .....+..+.+||+|+++.|+
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~----------------~l~~~~~~----~--~~~~~~vlNGIA~d~~~~~lf 219 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQ----------------ALVPDADA----L--TDSTNDVLNGIAFDAEHDRLF 219 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECG----------------GGSTTTTS----C--CCTTSSCEEEEEEETTTTEEE
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECC----------------cCcccccc----c--cCCcCCceEEEEEcCCCCEEE
Confidence 6666657889999999999854333210 01110000 0 000123568899999998888
Q ss_pred EEcc
Q 015650 397 ILGM 400 (403)
Q Consensus 397 ~~~~ 400 (403)
+.+.
T Consensus 220 VTGK 223 (243)
T 3mbr_X 220 VTGK 223 (243)
T ss_dssp EEET
T ss_pred EECC
Confidence 7653
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.95 E-value=3.1e-07 Score=87.05 Aligned_cols=230 Identities=7% Similarity=-0.015 Sum_probs=138.3
Q ss_pred CCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcce--eEE-EEeeeCCeEEEeeCCC-----CCCCCCceEEEEECCCCc
Q 015650 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGI--GVV-EMLFRCNILALVGGGP-----DPQYPLNKVMIWDDHQSR 167 (403)
Q Consensus 97 ~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~--~v~-~~~~~~~~~~~~s~~~-----d~~~~~~~i~iwd~~~~~ 167 (403)
+..|++++ ++.|..+|..+++......+. .+.. .+. ..... ++..++.... + +.|..+|..+|+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~-----g~v~a~D~~tG~ 187 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVC-DPKVGSTLTQAPFVA-KDTVLMGCSGAELGVR-----GAVNAFDLKTGE 187 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEE-TTEEEEECBCGGGTCC-----CEEEEEETTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCC-CCCccceeccCCEEE-CCEEEEEecCCccCCC-----CEEEEEECCCCc
Confidence 34555555 556999999999888766654 2110 111 11112 3444444432 4 899999999999
Q ss_pred eeEEEecCCce---------------------------------------eEEEEecC-ceEEE-e-c------------
Q 015650 168 CIGELSFRSEV---------------------------------------RSVKLRRD-RIIVV-L-E------------ 193 (403)
Q Consensus 168 ~~~~~~~~~~i---------------------------------------~~~~~~~~-~~~~~-~-d------------ 193 (403)
.+..+...... ..+++.++ +.+++ . +
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 98887632211 12455554 33333 2 1
Q ss_pred ----CeEEEEEcCCceeeeEeeccCC------Ccee---EEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeecC--
Q 015650 194 ----QKIFVYNFADLKLLHQIETIAN------PKGL---CAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHD-- 258 (403)
Q Consensus 194 ----~~i~i~d~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~-- 258 (403)
+.|..+|.++|+.+..++...+ .... .....+++...++..+..+|.++++|..++++.......
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 2599999999999888764321 1111 222235542122222457899999998886653221100
Q ss_pred ------------Cce--------------------------EEEEEcCCCCEEEEEeC----------------------
Q 015650 259 ------------SRI--------------------------ACFALTQDGQLLATSST---------------------- 278 (403)
Q Consensus 259 ------------~~i--------------------------~~~~~sp~g~~l~s~~~---------------------- 278 (403)
.++ ..++++|+..+|+..+.
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 427 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGA 427 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccc
Confidence 111 24678888777776542
Q ss_pred ---------------CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 279 ---------------KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 279 ---------------dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
++. |..||+.+++.+-++... ..+.+..+...+..++.++.||.|+.||.++++.
T Consensus 428 ~~~~~~~~~~~~~~~~g~-l~a~D~~tG~~~W~~~~~---~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 428 TLAMYPGPNGPTKKEMGQ-IRAFDLTTGKAKWTKWEK---FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp EEEEEECTTSTTSCCCEE-EEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cceeccCccccCCCCCCe-EEEEECCCCCEEEEecCC---CCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 467 999999999988777642 2222222233466777899999999999999984
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.89 E-value=5.6e-06 Score=71.97 Aligned_cols=226 Identities=12% Similarity=0.031 Sum_probs=135.4
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC-CCCCCCCceEEEEEC
Q 015650 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG-PDPQYPLNKVMIWDD 163 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~~~~~~i~iwd~ 163 (403)
.....++|+++|+++++... +.|..|+.+... . ..+. .......+++.+++.++++.. .+ ...|..++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~--~~~~--~~~~p~gia~~~dG~l~vad~~~~----~~~v~~~d~ 102 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q--IHAT--VEGKVSGLAFTSNGDLVATGWNAD----SIPVVSLVK 102 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-E--EEEE--CSSEEEEEEECTTSCEEEEEECTT----SCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-E--EEEe--CCCCceeEEEcCCCcEEEEeccCC----cceEEEEcC
Confidence 45778999999997777654 448888876532 2 2222 223577888888876555542 21 024777777
Q ss_pred CCCceeEEEec--CCceeEEEEecCceEEEe---cCeEEEEEcCCcee-eeEeec-------cCCCceeEEEeeCCCeEE
Q 015650 164 HQSRCIGELSF--RSEVRSVKLRRDRIIVVL---EQKIFVYNFADLKL-LHQIET-------IANPKGLCAVSQGVGSLV 230 (403)
Q Consensus 164 ~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~---d~~i~i~d~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~ 230 (403)
.+++....... ......++..+++..++. ++.|+++|...++. +..... .......-.++++++.+|
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ly 182 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLY 182 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEE
T ss_pred CCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEE
Confidence 77775443332 223345555566665553 67899999765421 111110 011111222388887777
Q ss_pred EEeeCCccCeEEEEEccC-Cce---eEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccE
Q 015650 231 LVCPGLQKGQVRVEHYAS-KRT---KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEI 306 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~-~~~---~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v 306 (403)
++- ...+.|.+|++.. +.. ..+. .......++++++|+++++....+. |.++|.. ++..............
T Consensus 183 v~d--~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~-V~~~~~~-G~~~~~~~~~~~~~~p 257 (306)
T 2p4o_A 183 VSN--TEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNS-VVRIAPD-RSTTIIAQAEQGVIGS 257 (306)
T ss_dssp EEE--TTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCC-EEEECTT-CCEEEEECGGGTCTTE
T ss_pred EEe--CCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCe-EEEECCC-CCEEEEeecccccCCc
Confidence 765 3568899999874 222 2221 1234577899999987776666777 9999964 6653322211122468
Q ss_pred EEEEeC---CCCCEEEEEeCCC
Q 015650 307 YSLAFS---SNAQWLAVSSDKG 325 (403)
Q Consensus 307 ~~l~~s---~d~~~l~s~~~dg 325 (403)
++++|. ||++.|++++..+
T Consensus 258 ~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 258 TAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEEEECCSTTTTTEEEEEECTT
T ss_pred eEEEEecccCCCCEEEEECCCC
Confidence 999998 8988777666543
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.89 E-value=9.8e-06 Score=80.33 Aligned_cols=236 Identities=10% Similarity=0.056 Sum_probs=151.0
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecc----cCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEE
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE----RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~i 160 (403)
...|.++...++|.+.+.. ++||.+|+..+.......... .-....|.++....++...++... +-|..
T Consensus 262 ~~~i~~i~~d~~g~lWigt-~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~------~Gl~~ 334 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWIGT-FNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYF------GGLNY 334 (795)
T ss_dssp CSBEEEEEECTTSCEEEEE-SSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESS------SCEEE
T ss_pred CCeEEEEEEcCCCCEEEEe-CChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECC------CCeEE
Confidence 4579999999888876655 458999997765533211110 012356888988887766665543 45888
Q ss_pred EECCCCceeEEEe--------cCCceeEEEEecCceEEE-e-cCeEEEEEcCCceeeeEeec--------cCCCceeEEE
Q 015650 161 WDDHQSRCIGELS--------FRSEVRSVKLRRDRIIVV-L-EQKIFVYNFADLKLLHQIET--------IANPKGLCAV 222 (403)
Q Consensus 161 wd~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~-~-d~~i~i~d~~~~~~~~~~~~--------~~~~~~~~~~ 222 (403)
|+..++.. ..+. ....|.++...+++.+.+ + ++-|..||..+++....... ....+..++.
T Consensus 335 ~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 413 (795)
T 4a2l_A 335 YHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYV 413 (795)
T ss_dssp ECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEE
T ss_pred eCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEE
Confidence 88665542 2222 234688999888877655 5 45899999876654322111 1234455555
Q ss_pred eeCCCeEEEEeeCCccCeEEEEEccCCceeEEee-----cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEE
Q 015650 223 SQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA-----HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEV 297 (403)
Q Consensus 223 ~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~-----~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~ 297 (403)
..++..+++++ .++-|.+||..++....+.. ....|.++...++|++.+ |+.+ . |.+||..+++.....
T Consensus 414 d~~g~~lWigt---~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~~-G-l~~~~~~~~~~~~~~ 487 (795)
T 4a2l_A 414 DEKKSLVYIGT---HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL-GTLS-A-LVRFNPEQRSFTTIE 487 (795)
T ss_dssp ETTTTEEEEEE---TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE-EESS-C-EEEEETTTTEEEECC
T ss_pred cCCCCEEEEEe---CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE-EecC-c-eeEEeCCCCeEEEcc
Confidence 44443256654 45678999988877666542 345789999998888655 4454 4 899998776553322
Q ss_pred ec----CCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 298 RR----GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 298 ~~----~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
.. ......|.++...++|.+.+... +-|..||..+++
T Consensus 488 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~ 528 (795)
T 4a2l_A 488 KEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLD 528 (795)
T ss_dssp BCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTE
T ss_pred ccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCe
Confidence 11 11235799999999998776554 458889987765
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.88 E-value=7.1e-07 Score=86.31 Aligned_cols=236 Identities=9% Similarity=0.037 Sum_probs=141.3
Q ss_pred CCEEEEEc-CCcEEEEEcCCCeeEEEEecccCc-ceeEE-EEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEe
Q 015650 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGG-GIGVV-EMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS 173 (403)
Q Consensus 97 ~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~-~~~v~-~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~ 173 (403)
+..|++++ ++.|..+|..+++.+......... ...+. ..... ++..++.......-..+.|..+|..+|+.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 34555555 666999999999888766552100 01111 01112 3444444322000011899999999999988876
Q ss_pred c-C-Cc------------------------------eeEEEEecCceEEE---ecC-------------------eEEEE
Q 015650 174 F-R-SE------------------------------VRSVKLRRDRIIVV---LEQ-------------------KIFVY 199 (403)
Q Consensus 174 ~-~-~~------------------------------i~~~~~~~~~~~~~---~d~-------------------~i~i~ 199 (403)
. . .+ ...+++.++...++ .++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 2 1 10 12367777544443 233 49999
Q ss_pred EcCCceeeeEeeccCC---------CceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeE-EeecC-----------
Q 015650 200 NFADLKLLHQIETIAN---------PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKF-IMAHD----------- 258 (403)
Q Consensus 200 d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~-~~~~~----------- 258 (403)
|.++|+.+..++.... +.....+..+++..-++..++.+|.++++|..++++.. .....
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 9999999888765321 11222333455432222235689999999998876541 11000
Q ss_pred -Cc------------------------eEEEEEcCCCCEEEEEe------------------------------------
Q 015650 259 -SR------------------------IACFALTQDGQLLATSS------------------------------------ 277 (403)
Q Consensus 259 -~~------------------------i~~~~~sp~g~~l~s~~------------------------------------ 277 (403)
.+ -..++++|+..+++...
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 00 01267888777665421
Q ss_pred CCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 278 TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 278 ~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
.+|. |..||+.+++.+-....+ .......+...+.++++++.||.|+.||.++++.
T Consensus 436 ~~g~-l~A~D~~tG~~~W~~~~~---~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 436 VSGA-LLAWDPVKQKAAWKVPYP---THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CEEE-EEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccce-EEEEeCCCCcEEEEccCC---CCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 2377 999999999988777642 2333334445678888999999999999999985
No 255
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.83 E-value=2.8e-05 Score=67.86 Aligned_cols=230 Identities=10% Similarity=-0.058 Sum_probs=141.0
Q ss_pred CEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCC-eEEEeeCCCCCCCCCceEEEEECCC----CceeEEE
Q 015650 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMIWDDHQ----SRCIGEL 172 (403)
Q Consensus 98 ~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~~~~~~i~iwd~~~----~~~~~~~ 172 (403)
.+|+.+..+.|+..++++.+.. ..+. .......+.|++. +..+++.... +.|..+++.. ......+
T Consensus 2 ~~ll~~~~~~I~~i~~~~~~~~--~~~~--~~~~p~g~~~d~~~~~ly~~D~~~-----~~I~~~~~~g~~~~~~~~~~~ 72 (316)
T 1ijq_A 2 AYLFFTNRHEVRKMTLDRSEYT--SLIP--NLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVI 72 (316)
T ss_dssp CEEEEECBSSEEEEETTSCCCE--EEEC--SCSSEEEEEEETTTTEEEEEETTT-----TEEEEEEC--------CEEEE
T ss_pred CEEEEECCCeEEEEECCCcceE--ehhc--CCCceEEEEEEeCCCEEEEEECCC-----CcEEEEECCCCCCCcccEEEE
Confidence 3566777777999998876543 2232 3345678888863 4455554444 8999999875 2222223
Q ss_pred e-cCCceeEEEEec-CceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEcc
Q 015650 173 S-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (403)
Q Consensus 173 ~-~~~~i~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~ 247 (403)
. .-.....+++.+ ++.+.+ ..+.|.++++........+.........+++.|.+..+|++-.+ ..+.|..++++
T Consensus 73 ~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~-~~~~I~~~~~d 151 (316)
T 1ijq_A 73 SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLN 151 (316)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETT
T ss_pred eCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC-CCCeEEEEcCC
Confidence 2 224567899986 444444 35789999986543322333233445778899888777766433 23788888887
Q ss_pred CCceeEEe-ecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEec-CCCcccEEEEEeCCCCCEEEEEeCC
Q 015650 248 SKRTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRR-GADRAEIYSLAFSSNAQWLAVSSDK 324 (403)
Q Consensus 248 ~~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~s~~~d 324 (403)
......+. ..-.....|++++++..|+.+.. .+. |..+|+.... .+.+.. .........|++. .+.++++-...
T Consensus 152 G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~-I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~ 228 (316)
T 1ijq_A 152 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIIN 228 (316)
T ss_dssp SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTT
T ss_pred CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe-EEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCC
Confidence 76554443 23456789999998777766554 456 9999986433 333321 1112345778874 35555565677
Q ss_pred CcEEEEEeecCCCCCC
Q 015650 325 GTVHVFNLKVNSGSAR 340 (403)
Q Consensus 325 g~v~iwd~~~~~~~~~ 340 (403)
+.|..++..+++....
T Consensus 229 ~~V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 229 EAIFSANRLTGSDVNL 244 (316)
T ss_dssp TEEEEEETTTCCCCEE
T ss_pred CeEEEEeCCCCcceEE
Confidence 8898888777765433
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.83 E-value=1.2e-05 Score=69.90 Aligned_cols=223 Identities=9% Similarity=-0.023 Sum_probs=132.1
Q ss_pred eeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEEec---C--eEEEEEcCCc
Q 015650 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLE---Q--KIFVYNFADL 204 (403)
Q Consensus 130 ~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d---~--~i~i~d~~~~ 204 (403)
.....+++++++.++++.... +.|..||... +....+.....+..+++.+++.+++.+ + .|..+|..++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~-----~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEV-----GEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTT-----TEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEeCCC-----CeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence 455678888887766665555 8899998654 444444555678899999999877643 2 4777787777
Q ss_pred eeeeEeeccC-CCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEE--ee---------cCCceEEEEEcCCCCE
Q 015650 205 KLLHQIETIA-NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFI--MA---------HDSRIACFALTQDGQL 272 (403)
Q Consensus 205 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~--~~---------~~~~i~~~~~sp~g~~ 272 (403)
+......... .....++..+ +..++++- ..++.|.++|...+..... .. .-.....+ ++++++
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d--~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ 180 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPLS-DTQYLTAD--SYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNF 180 (306)
T ss_dssp CEEEEEECTTCSCEEEEEESS-SSEEEEEE--TTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTE
T ss_pred eEEEEEeCCCccccCcccccC-CCcEEEEE--CCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCE
Confidence 6543322111 1112333322 33333332 2467888888765422211 10 11234455 788887
Q ss_pred EEEEeC-CCcEEEEEEcCC-CcE--EEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCCCCCCCCC
Q 015650 273 LATSST-KGTLVRIFNTLD-GTL--LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPRSTSD 348 (403)
Q Consensus 273 l~s~~~-dg~~i~iwd~~~-~~~--~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 348 (403)
|+.+.. .+. |.+|++.. ++. ...+.. ......|+++++|+++++....+.|.+++.+ ++...
T Consensus 181 lyv~d~~~~~-I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~--------- 246 (306)
T 2p4o_A 181 LYVSNTEKML-LLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTI--------- 246 (306)
T ss_dssp EEEEETTTTE-EEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEE---------
T ss_pred EEEEeCCCCE-EEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEE---------
Confidence 766554 556 99999864 321 122221 1235678999999887776677889998754 33100
Q ss_pred CCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEec---cCCCEEEEEccC
Q 015650 349 PTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFG---HQKNTVVILGMD 401 (403)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs---~d~~~l~~~~~d 401 (403)
+..+...-..+++++|. ||+++|++++..
T Consensus 247 ------------------------~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 247 ------------------------IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ------------------------EECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred ------------------------EeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 00011112457889998 899988887654
No 257
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.81 E-value=2.2e-05 Score=70.56 Aligned_cols=238 Identities=7% Similarity=-0.046 Sum_probs=146.4
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEEEECCC
Q 015650 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQ 165 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~~ 165 (403)
.-.|.+..+ ..+|+.+..+.|+.++++..... ..+. .......++|.+ ++.++++.... +.|..+++..
T Consensus 78 ~~~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~--~~~~--~~~~~~gl~~d~~~~~ly~~D~~~-----~~I~r~~~~g 147 (386)
T 3v65_B 78 RRSCKALGP-EPVLLFANRIDIRQVLPHRSEYT--LLLN--NLENAIALDFHHRRELVFWSDVTL-----DRILRANLNG 147 (386)
T ss_dssp SSCEEECSS-CCEEEEECBSCEEEECTTSCCCE--EEEC--SCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTS
T ss_pred CCeECCccc-cceeEeecCccceeeccCCCcEE--EEec--CCCccEEEEEecCCCeEEEEeCCC-----CcEEEEecCC
Confidence 344555555 45666666677888888765433 2222 334577888885 44455554444 7899999876
Q ss_pred CceeEEEe-cCCceeEEEEecC-ceEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCe
Q 015650 166 SRCIGELS-FRSEVRSVKLRRD-RIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQ 240 (403)
Q Consensus 166 ~~~~~~~~-~~~~i~~~~~~~~-~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~ 240 (403)
+.....+. .......+++.+. +.+.+. .+.|.++++........+.........+++.|.+..+|++-.+ ..+.
T Consensus 148 ~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~-~~~~ 226 (386)
T 3v65_B 148 SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG-NTPR 226 (386)
T ss_dssp CCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS-SSCE
T ss_pred CCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC-CCCE
Confidence 65444333 3345677888874 444443 5688888876443322333233445778999888877776533 2378
Q ss_pred EEEEEccCCceeEEe-ecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEE
Q 015650 241 VRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWL 318 (403)
Q Consensus 241 i~v~d~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l 318 (403)
|..++++......+. ..-.....|+|+|++..|+.+.. .+. |..+|+........+.. .......|++ ..+.++
T Consensus 227 I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~--~~~~P~giav-~~~~ly 302 (386)
T 3v65_B 227 IEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGSHRKAVISQ--GLPHPFAITV-FEDSLY 302 (386)
T ss_dssp EEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE-EEEECTTSCSCEEEECS--SCSSEEEEEE-ETTEEE
T ss_pred EEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE-EEEEeCCCCeeEEEEEC--CCCCceEEEE-ECCEEE
Confidence 999998876555443 33445789999987777766554 455 99999764433323332 2345677888 344555
Q ss_pred EEEeCCCcEEEEEeecCCCCC
Q 015650 319 AVSSDKGTVHVFNLKVNSGSA 339 (403)
Q Consensus 319 ~s~~~dg~v~iwd~~~~~~~~ 339 (403)
++-...+.|..++..+++...
T Consensus 303 ~td~~~~~V~~~~~~~G~~~~ 323 (386)
T 3v65_B 303 WTDWHTKSINSANKFTGKNQE 323 (386)
T ss_dssp EEETTTTEEEEEETTTCCSCE
T ss_pred EeeCCCCeEEEEECCCCcceE
Confidence 566677888888866666443
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.80 E-value=2.8e-05 Score=68.84 Aligned_cols=239 Identities=7% Similarity=-0.047 Sum_probs=146.6
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEEEECC
Q 015650 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDH 164 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~ 164 (403)
+..+|.+..+ ..+|+.+..+.|+..+++..... ..+. .......++|++ ++.++.+.... +.|..+++.
T Consensus 34 d~~~C~~~~~-~~~ll~~~~~~I~~i~~~g~~~~--~~~~--~~~~~~~l~~d~~~~~ly~~D~~~-----~~I~r~~~~ 103 (349)
T 3v64_C 34 DRRSCKALGP-EPVLLFANRIDIRQVLPHRSEYT--LLLN--NLENAIALDFHHRRELVFWSDVTL-----DRILRANLN 103 (349)
T ss_dssp TSSCEEESSS-CCEEEEECBSCEEEECTTSCCEE--EEEC--SCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETT
T ss_pred CCCccccccc-CceeEeecccceEEEeCCCCeeE--Eeec--CCCceEEEEEeccccEEEEEeccC-----CceEEEecC
Confidence 3455666666 45666666666888887654433 2232 334577888875 44444444444 789999987
Q ss_pred CCceeEEEe-cCCceeEEEEecC-ceEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccC
Q 015650 165 QSRCIGELS-FRSEVRSVKLRRD-RIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG 239 (403)
Q Consensus 165 ~~~~~~~~~-~~~~i~~~~~~~~-~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 239 (403)
.+.....+. .......+++.+. +.+.+. .+.|.+.++........+.........+++.|.+..+|++-.+ ..+
T Consensus 104 g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~-~~~ 182 (349)
T 3v64_C 104 GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG-NTP 182 (349)
T ss_dssp SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECS-SSC
T ss_pred CCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccC-CCC
Confidence 665444333 3345678999874 444443 5689999986543322232333445678999888777766533 237
Q ss_pred eEEEEEccCCceeEEe-ecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCE
Q 015650 240 QVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQW 317 (403)
Q Consensus 240 ~i~v~d~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~ 317 (403)
.|..++++......+. ..-.....|+++|++..|+.+.. .+. |..+|+........+.. .......|++ ..+.+
T Consensus 183 ~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~-I~~~~~dG~~~~~~~~~--~~~~P~giav-~~~~l 258 (349)
T 3v64_C 183 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGSHRKAVISQ--GLPHPFAITV-FEDSL 258 (349)
T ss_dssp EEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEECS--SCSSEEEEEE-ETTEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE-EEEEeCCCCceEEEEeC--CCCCceEEEE-ECCEE
Confidence 8999998876554443 23345789999987777766554 455 99999764333322322 2245677888 34455
Q ss_pred EEEEeCCCcEEEEEeecCCCCC
Q 015650 318 LAVSSDKGTVHVFNLKVNSGSA 339 (403)
Q Consensus 318 l~s~~~dg~v~iwd~~~~~~~~ 339 (403)
+++-...+.|..++..+++...
T Consensus 259 y~td~~~~~V~~~~~~~G~~~~ 280 (349)
T 3v64_C 259 YWTDWHTKSINSANKFTGKNQE 280 (349)
T ss_dssp EEEETTTTEEEEEETTTCCSCE
T ss_pred EEecCCCCeEEEEEccCCCccE
Confidence 5555567788877765665443
No 259
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.78 E-value=4e-05 Score=69.16 Aligned_cols=231 Identities=9% Similarity=-0.073 Sum_probs=143.1
Q ss_pred CEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEEEECCCC----ceeEEE
Q 015650 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQS----RCIGEL 172 (403)
Q Consensus 98 ~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~~~----~~~~~~ 172 (403)
.+|+.+..+.|+..+++...... .+. ....+..++|++ ++.++.+.... +.|+.+++... .....+
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~--~~~--~~~~~~~l~~d~~~~~lywsD~~~-----~~I~~~~~~g~~~~~~~~~~~ 154 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTS--LIP--NLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVI 154 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEE--EEC--SCSCEEEEEEETTTTEEEEEETTT-----TEEEEEEC------CCCEEEE
T ss_pred ceeEEeccceeEEEccCCcceeE--ecc--ccCcceEEeeeeccCceEEEecCC-----CeEEEEEcccCCCCCcceEEE
Confidence 46666667778888887654432 232 445677888886 34444444444 78988887652 222233
Q ss_pred e-cCCceeEEEEec-CceEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEcc
Q 015650 173 S-FRSEVRSVKLRR-DRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (403)
Q Consensus 173 ~-~~~~i~~~~~~~-~~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~ 247 (403)
. .......+++.+ .+.+.+. .+.|.+.++........+.........+++.|.+..+|++-.+ ..+.|...+++
T Consensus 155 ~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~-~~~~I~~~~~d 233 (400)
T 3p5b_L 155 SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLN 233 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS-SSCCEEEEETT
T ss_pred eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC-CCCEEEEEeCC
Confidence 3 345677889987 4444443 5689999987544333333333445788999987777766433 34789999988
Q ss_pred CCceeEEe-ecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCC
Q 015650 248 SKRTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG 325 (403)
Q Consensus 248 ~~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg 325 (403)
......+. ..-.....|++++++..|+.+.. .+. |..+|+........+..........+|++. .+.++++-...+
T Consensus 234 G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~ 311 (400)
T 3p5b_L 234 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 311 (400)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSC
T ss_pred CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE-EEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCC
Confidence 76555543 33356789999998877776654 455 999998644333333321122345677773 334555666778
Q ss_pred cEEEEEeecCCCCCC
Q 015650 326 TVHVFNLKVNSGSAR 340 (403)
Q Consensus 326 ~v~iwd~~~~~~~~~ 340 (403)
.|..+|..+++....
T Consensus 312 ~V~~~~~~~G~~~~~ 326 (400)
T 3p5b_L 312 AIFSANRLTGSDVNL 326 (400)
T ss_dssp SEEEEESSSCCCCEE
T ss_pred eEEEEEcCCCCceEE
Confidence 898888777765443
No 260
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.77 E-value=6.6e-06 Score=79.59 Aligned_cols=191 Identities=14% Similarity=0.176 Sum_probs=115.2
Q ss_pred CCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcce-------e-EEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc
Q 015650 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI-------G-VVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (403)
Q Consensus 96 d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~-------~-v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~ 167 (403)
++.+++...++.|..+|..+++.+........... . ...+.+..+. .++. ..+ +.|..+|..+|+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~-~~d-----g~l~alD~~tG~ 138 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDK-VYVG-TLD-----GRLIALDAKTGK 138 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTE-EEEE-CTT-----SEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCE-EEEE-cCC-----CEEEEEECCCCC
Confidence 44445544456688899888888876554311100 0 0112223333 3333 344 899999999999
Q ss_pred eeEEEecC-----CceeE-EEEecCceEEE-e-------cCeEEEEEcCCceeeeEeeccC-CC----------------
Q 015650 168 CIGELSFR-----SEVRS-VKLRRDRIIVV-L-------EQKIFVYNFADLKLLHQIETIA-NP---------------- 216 (403)
Q Consensus 168 ~~~~~~~~-----~~i~~-~~~~~~~~~~~-~-------d~~i~i~d~~~~~~~~~~~~~~-~~---------------- 216 (403)
.+..+... ..+.. ..+ .++.+++ . ++.|+.+|.++|+.+..+.... .+
T Consensus 139 ~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 217 (668)
T 1kv9_A 139 AIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTW 217 (668)
T ss_dssp EEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTC
T ss_pred EeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccC
Confidence 98887631 11211 111 2555555 2 4789999999999988875321 00
Q ss_pred --------------ceeEEEeeCCCeEEEEeeCCccC-------------------eEEEEEccCCceeEEe-e--cC--
Q 015650 217 --------------KGLCAVSQGVGSLVLVCPGLQKG-------------------QVRVEHYASKRTKFIM-A--HD-- 258 (403)
Q Consensus 217 --------------~~~~~~~~~~~~~~~~~~g~~d~-------------------~i~v~d~~~~~~~~~~-~--~~-- 258 (403)
...+++.+..+.+++.+ .++ .|..+|.++++..-.. . |.
T Consensus 218 ~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~---~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~w 294 (668)
T 1kv9_A 218 QGDQYWKLGGGGTVWDSMAYDPELDLLYVGT---GNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSW 294 (668)
T ss_dssp CSSCHHHHCEECCCCSCEEEETTTTEEEEEC---CCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS
T ss_pred CccceeeeCCCCccccceEEcCCCCEEEEeC---CCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccc
Confidence 11357777766655553 222 4889999887764322 1 22
Q ss_pred -----CceEEEEEcCCCC---EEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 259 -----SRIACFALTQDGQ---LLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 259 -----~~i~~~~~sp~g~---~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
.+.....+..+|+ .++.++.+|. ++++|..+|+.+..+.
T Consensus 295 d~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 295 DFTATQQITLAELNIDGKPRKVLMQAPKNGF-FYVLDRTNGKLISAEK 341 (668)
T ss_dssp CCCCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEE
T ss_pred cccCCCCcEEEEeccCCcEEEEEEEECCCCE-EEEEECCCCCEecccc
Confidence 2222223334675 6888999999 9999999999885544
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.76 E-value=6.6e-06 Score=78.02 Aligned_cols=227 Identities=7% Similarity=0.012 Sum_probs=134.4
Q ss_pred EEEEc-CCcEEEEEcCCCeeEEEEecccCcce--eEE-EEeeeCCeEEEeeCC-----CCCCCCCceEEEEECCCCceeE
Q 015650 100 FAAGT-DHGFRIYNCDPFREIFRRDFERGGGI--GVV-EMLFRCNILALVGGG-----PDPQYPLNKVMIWDDHQSRCIG 170 (403)
Q Consensus 100 l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~--~v~-~~~~~~~~~~~~s~~-----~d~~~~~~~i~iwd~~~~~~~~ 170 (403)
|++++ ++.|..+|..+++.+....+. .+.. .+. ..... ++..++..+ .+ +.|+-+|.++|+.+.
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~-~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~-----g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENS-DIKVGSTLTIAPYVV-KDKVIIGSSGAELGVR-----GYLTAYDVKTGEQVW 196 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEE-TTEEEECCBCGGGTCC-----CEEEEEETTTCCEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCC-CCCccceeecCCEEE-CCEEEEEecccccCCC-----CeEEEEECCCCcEEE
Confidence 55555 555889999999888766553 2110 111 11112 344454442 24 899999999999988
Q ss_pred EEecCCce---------------------------------------eEEEEecCce-EEE-e-c---------------
Q 015650 171 ELSFRSEV---------------------------------------RSVKLRRDRI-IVV-L-E--------------- 193 (403)
Q Consensus 171 ~~~~~~~i---------------------------------------~~~~~~~~~~-~~~-~-d--------------- 193 (403)
.+...... ..+++.++.. +++ . +
T Consensus 197 ~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y 276 (599)
T 1w6s_A 197 RAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKW 276 (599)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccc
Confidence 87732211 1234555433 333 2 2
Q ss_pred -CeEEEEEcCCceeeeEeeccCCCc-------eeEEEe---eCCCeEEEEeeCCccCeEEEEEccCCceeEEeec-----
Q 015650 194 -QKIFVYNFADLKLLHQIETIANPK-------GLCAVS---QGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAH----- 257 (403)
Q Consensus 194 -~~i~i~d~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~----- 257 (403)
+.|..+|.++|+.+..++...... ..+.+. .+++..-++..+..+|.++++|.+++++..-...
T Consensus 277 ~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 356 (599)
T 1w6s_A 277 TMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVN 356 (599)
T ss_dssp SSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred cceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcc
Confidence 379999999999988876543211 112222 3453222222245889999999988665322110
Q ss_pred ---------CCce--------------------------EEEEEcCCCCEEEEEe-------------------------
Q 015650 258 ---------DSRI--------------------------ACFALTQDGQLLATSS------------------------- 277 (403)
Q Consensus 258 ---------~~~i--------------------------~~~~~sp~g~~l~s~~------------------------- 277 (403)
..++ ..++++|+..++++..
T Consensus 357 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 436 (599)
T 1w6s_A 357 VFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATL 436 (599)
T ss_dssp SEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred cccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccc
Confidence 0011 2456777766665431
Q ss_pred --------------CCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 278 --------------TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 278 --------------~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
..|. |.-||+.+++.+-..... .++..-.....+.+++.++.||.|+.||.++++.
T Consensus 437 ~~~~~p~~~~~~~~~~G~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 437 NMYPGPKGDRQNYEGLGQ-IKAYNAITGDYKWEKMER---FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp EEEECTTSBTTTTBCCEE-EEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred eeccCCcCCcccCCCcCe-EEEEECCCCCEEeEecCC---CCccCcceEecCCEEEEECCCCeEEEEECCCCCE
Confidence 2466 889999999987776532 1221111222567777899999999999999984
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.72 E-value=1.1e-05 Score=76.31 Aligned_cols=194 Identities=10% Similarity=0.129 Sum_probs=113.7
Q ss_pred CCCEEEEEc-CCcEEEEEc-CCCeeEEEEecccCcce--------eEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCC
Q 015650 96 DHGCFAAGT-DHGFRIYNC-DPFREIFRRDFERGGGI--------GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (403)
Q Consensus 96 d~~~l~~~~-~~~i~iw~~-~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~ 165 (403)
++.+++... ++.|..+|. .+++.+....+...... ....+....+ ..++. ..+ +.|..+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~-~~d-----g~l~alD~~t 134 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAG-QIVKK-QAN-----GHLLALDAKT 134 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETT-EEEEE-CTT-----SEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECC-EEEEE-eCC-----CEEEEEECCC
Confidence 444445444 455888898 78888766655411100 0011223333 33333 334 8999999999
Q ss_pred CceeEEEecCC-----ceeE-EEEecCceEEE-e-------cCeEEEEEcCCceeeeEeeccCCC---------------
Q 015650 166 SRCIGELSFRS-----EVRS-VKLRRDRIIVV-L-------EQKIFVYNFADLKLLHQIETIANP--------------- 216 (403)
Q Consensus 166 ~~~~~~~~~~~-----~i~~-~~~~~~~~~~~-~-------d~~i~i~d~~~~~~~~~~~~~~~~--------------- 216 (403)
|+.+..+.... .+.+ .... ++.+++ . ++.|+.+|.++|+.+..+......
T Consensus 135 G~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 213 (571)
T 2ad6_A 135 GKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPH 213 (571)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccc
Confidence 99988776222 2221 1222 455555 2 589999999999998877542211
Q ss_pred -----------------------ceeEEEeeCCCeEEEEeeCC----------cc----CeEEEEEccCCceeEEe---e
Q 015650 217 -----------------------KGLCAVSQGVGSLVLVCPGL----------QK----GQVRVEHYASKRTKFIM---A 256 (403)
Q Consensus 217 -----------------------~~~~~~~~~~~~~~~~~~g~----------~d----~~i~v~d~~~~~~~~~~---~ 256 (403)
...+++.+....+++.+ +. .+ +.|..+|.++++..-.. .
T Consensus 214 ~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~-g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~ 292 (571)
T 2ad6_A 214 YGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGS-GNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTP 292 (571)
T ss_dssp GCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC-CCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESST
T ss_pred ccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEEC-CCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCC
Confidence 01245566555555543 21 11 36889999887754322 1
Q ss_pred cCC-------ceEEEEEcCCCC---EEEEEeCCCcEEEEEEcCCCcEEEEEec
Q 015650 257 HDS-------RIACFALTQDGQ---LLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (403)
Q Consensus 257 ~~~-------~i~~~~~sp~g~---~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (403)
|.. ...-+....+|+ .++.++.+|. ++++|..+|+.+..+..
T Consensus 293 ~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 293 HDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGI-LYTLNRENGNLIVAEKV 344 (571)
T ss_dssp TCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSE-EEEEETTTCCEEEEEES
T ss_pred CcccccccCCCCEEEecccCCcEEEEEEEeCCCcE-EEEEECCCCCEEeeecc
Confidence 211 111122224774 5778888999 99999999999877653
No 263
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.70 E-value=9.8e-05 Score=62.80 Aligned_cols=229 Identities=13% Similarity=0.171 Sum_probs=151.5
Q ss_pred EEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEee-eCCeEEEeeCCCCCCCCCceEEEEECCC-Ccee
Q 015650 92 SFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNKVMIWDDHQ-SRCI 169 (403)
Q Consensus 92 ~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~s~~~d~~~~~~~i~iwd~~~-~~~~ 169 (403)
-.+|..+.||.-....+.|||+++.+++....+. ..|.-+.| +++.+.+++. ..|+-|++.. ..++
T Consensus 73 IMnP~~~ViALrag~~LQiFnletK~klks~~~~----e~VvfWkWis~~~L~lVT~--------taVyHWs~~~~s~P~ 140 (365)
T 2xzh_A 73 IMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT----DDVTFWKWISLNTVALVTD--------NAVYHWSMEGESQPV 140 (365)
T ss_dssp EECSSSSEEEEEETTEEEEEETTTTEEEEEEECS----SCEEEEEECSSSEEEEEES--------SEEEEEESSTTCCCE
T ss_pred eeCCCccEEEEecCCeEEEechHHhhhhcceecC----CccEEEEecCCCeEEEEcC--------CcEEEEcccCCCCCc
Confidence 3588888888877666999999999888555543 57888888 5567778887 6899999875 4666
Q ss_pred EEEe-c----CCceeEEEEecCceEEE----------ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeC--CCeEE-E
Q 015650 170 GELS-F----RSEVRSVKLRRDRIIVV----------LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQG--VGSLV-L 231 (403)
Q Consensus 170 ~~~~-~----~~~i~~~~~~~~~~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~ 231 (403)
+.+. | ...|..-..+++.++++ ..|.+.+|..+.+ .-+.+++|......+.+.-+ ...++ +
T Consensus 141 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~f 219 (365)
T 2xzh_A 141 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCF 219 (365)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEE
T ss_pred eeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEE
Confidence 7776 3 45677778888888777 1578899997653 34455555432222111111 11111 2
Q ss_pred EeeCCccCeEEEEEccCCc-------eeE---Eee---cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 232 VCPGLQKGQVRVEHYASKR-------TKF---IMA---HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~~-------~~~---~~~---~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
+.-+...+.+++.++.... .+. +.. ..+-.-++..++.-..++.-+.-|. |++||++++.++..-+
T Consensus 220 a~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~-ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 220 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMNR 298 (365)
T ss_dssp EEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEEEEE
T ss_pred EEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcE-EEEEEcccCcEEEEec
Confidence 2212223688888875420 011 111 2344567888888888888899999 9999999999998777
Q ss_pred cCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 299 RGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 299 ~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
- ....|..-+-.....-++.....|.|.--.++..+
T Consensus 299 I--S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 299 I--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp C--CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred c--CCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 5 33566655555554556666688888887777665
No 264
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.69 E-value=0.0001 Score=62.70 Aligned_cols=217 Identities=11% Similarity=0.137 Sum_probs=139.7
Q ss_pred EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCc
Q 015650 108 FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR 187 (403)
Q Consensus 108 i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~ 187 (403)
|.|.|+........+.+. ....|. +|....++--. . ..+.|+|+++.+.++.+...+.|.-=.|-.+.
T Consensus 51 VvIiDl~n~~~~~Rrpi~--AdsAIM----nP~~~ViALra-g-----~~LQiFnletK~klks~~~~e~VvfWkWis~~ 118 (365)
T 2xzh_A 51 VVIIDMNDPSNPIRRPIS--ADSAIM----NPASKVIALKA-G-----KTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN 118 (365)
T ss_dssp EEEEETTSTTSCEEEECC--CSEEEE----CSSSSEEEEEE-T-----TEEEEEETTTTEEEEEEECSSCEEEEEECSSS
T ss_pred EEEEECCCCCCccccccc--cceeee----CCCccEEEEec-C-----CeEEEechHHhhhhcceecCCccEEEEecCCC
Confidence 889999876666555554 222222 33333222222 2 78999999999999999988888888887665
Q ss_pred eEEE-ecCeEEEEEcCC-ceeeeEeeccC--CCceeEEEeeCCCeEEEEeeC------CccCeEEEEEccCCceeEEeec
Q 015650 188 IIVV-LEQKIFVYNFAD-LKLLHQIETIA--NPKGLCAVSQGVGSLVLVCPG------LQKGQVRVEHYASKRTKFIMAH 257 (403)
Q Consensus 188 ~~~~-~d~~i~i~d~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g------~~d~~i~v~d~~~~~~~~~~~~ 257 (403)
.+.. ++..|+-|++.. ..+.+.++.|. .....+.+..+.+..+++..| .-.|.+.+|..+.+..+.+++|
T Consensus 119 ~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGh 198 (365)
T 2xzh_A 119 TVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGH 198 (365)
T ss_dssp EEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCS
T ss_pred eEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeee
Confidence 5544 899999999974 34555554432 234555555544443333322 2357899999999999999998
Q ss_pred CCceEEEEEcCC---CCEEEEEeCC---CcEEEEEEcCCC--------cEEEEEe--cCCCcccEEEEEeCCCCCEEEEE
Q 015650 258 DSRIACFALTQD---GQLLATSSTK---GTLVRIFNTLDG--------TLLQEVR--RGADRAEIYSLAFSSNAQWLAVS 321 (403)
Q Consensus 258 ~~~i~~~~~sp~---g~~l~s~~~d---g~~i~iwd~~~~--------~~~~~~~--~~~~~~~v~~l~~s~d~~~l~s~ 321 (403)
......+.+.-+ ..+++.+... +. ++|-++... +....+. ......-..++..|+....+..-
T Consensus 199 aa~F~~~~~~g~~~~~~lf~fa~r~~~g~k-LhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyvi 277 (365)
T 2xzh_A 199 AASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI 277 (365)
T ss_dssp EEEEEEECCTTCSSCEEEEEEEEEETTEEE-EEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEE
T ss_pred eeeeEEEecCCCCCCceEEEEEEecCCCcE-EEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEE
Confidence 776655444221 1244444332 45 899988432 1111111 11112345678888888889899
Q ss_pred eCCCcEEEEEeecCCC
Q 015650 322 SDKGTVHVFNLKVNSG 337 (403)
Q Consensus 322 ~~dg~v~iwd~~~~~~ 337 (403)
+.-|.|++||++++..
T Consensus 278 TK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 278 TKYGYIHLYDLETGTC 293 (365)
T ss_dssp ETTSEEEEEETTTCCE
T ss_pred eCCcEEEEEEcccCcE
Confidence 9999999999999984
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=4.7e-05 Score=75.27 Aligned_cols=237 Identities=13% Similarity=0.027 Sum_probs=145.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEe------cccCcceeEEEEeeeCCeEEEeeCCCCCCCCCce
Q 015650 84 PPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRD------FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (403)
....|.++...++|.+-+...+++|..|+........... ...-....|.++....++.+.++... +-
T Consensus 311 ~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~------~G 384 (781)
T 3v9f_A 311 SNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDG------GG 384 (781)
T ss_dssp SSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBS------SC
T ss_pred CCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCC------Cc
Confidence 3467999999998887766558889999876543221111 01012346888888876655554422 45
Q ss_pred EEEEECCCCceeEEE---e-cCCceeEEEEecCceEEE-e-cCeEEEEEcCCceeeeEeec---cCCCceeEEEeeCCCe
Q 015650 158 VMIWDDHQSRCIGEL---S-FRSEVRSVKLRRDRIIVV-L-EQKIFVYNFADLKLLHQIET---IANPKGLCAVSQGVGS 228 (403)
Q Consensus 158 i~iwd~~~~~~~~~~---~-~~~~i~~~~~~~~~~~~~-~-d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 228 (403)
|..|+..+++..... . ....|.++...+++.+.+ + ++.|..+|..+++.. .+.. ....+..+....++ .
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g-~ 462 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNK-K 462 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTS-E
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCC-C
Confidence 888887654332211 1 345788898887777666 4 478999998776543 2221 12334444443332 3
Q ss_pred EEEEeeCCccCeEEEEEccCCceeEEeec------CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEec--C
Q 015650 229 LVLVCPGLQKGQVRVEHYASKRTKFIMAH------DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR--G 300 (403)
Q Consensus 229 ~~~~~~g~~d~~i~v~d~~~~~~~~~~~~------~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~--~ 300 (403)
+++++ . +-|.+||..++....+... ...|.++...++|++.+ |+..+. |..||..+++. ..+.. .
T Consensus 463 lwigt---~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~G-l~~~~~~~~~~-~~~~~~~~ 535 (781)
T 3v9f_A 463 IWIGT---H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGG-VGIYTPDMQLV-RKFNQYEG 535 (781)
T ss_dssp EEEEE---T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSC-EEEECTTCCEE-EEECTTTT
T ss_pred EEEEE---C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCC-EEEEeCCCCeE-EEccCCCC
Confidence 44443 3 5688899887665554321 35789999999998554 555445 88899766554 33432 1
Q ss_pred CCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 301 ADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 301 ~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
.....|.++...++|.+.++. .+|.|..||..+++
T Consensus 536 l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 536 FCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFD 570 (781)
T ss_dssp CSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCC
T ss_pred CCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCc
Confidence 123578999999999876654 46654778776554
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.67 E-value=1.4e-05 Score=75.83 Aligned_cols=140 Identities=11% Similarity=0.118 Sum_probs=85.9
Q ss_pred CeEEEEEcCCceeeeEeeccCCC-------ceeEEEe---eCCCeEEEEeeCCccCeEEEEEccCCceeEE-eecC----
Q 015650 194 QKIFVYNFADLKLLHQIETIANP-------KGLCAVS---QGVGSLVLVCPGLQKGQVRVEHYASKRTKFI-MAHD---- 258 (403)
Q Consensus 194 ~~i~i~d~~~~~~~~~~~~~~~~-------~~~~~~~---~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~-~~~~---- 258 (403)
+.|..+|.++|+.+..++..... ...+.+. .+++..-++..++.+|.++++|.+++++..- ....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 370 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITW 370 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccc
Confidence 57999999999998887542211 1122222 3454222222346899999999888664321 1110
Q ss_pred ---------Cc--------------------------------eEEEEEcCCCCEEEEEe--------------------
Q 015650 259 ---------SR--------------------------------IACFALTQDGQLLATSS-------------------- 277 (403)
Q Consensus 259 ---------~~--------------------------------i~~~~~sp~g~~l~s~~-------------------- 277 (403)
.+ -..++++|+..++++..
T Consensus 371 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~ 450 (582)
T 1flg_A 371 ASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAY 450 (582)
T ss_dssp EEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCce
Confidence 00 01356677655555432
Q ss_pred -------------CCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 278 -------------TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 278 -------------~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
.+|. |.-||+.+++.+-+...+ ..+..-.....+.+++.++.||.|+.||.++++.
T Consensus 451 ~g~~~~~~p~~~~~~G~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 451 LGMGFRIKRMYDDHVGS-LRAMDPVSGKVVWEHKEH---LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp CCEEEEEEESCSSCSEE-EEEECTTTCCEEEEEEES---SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred eccceeecCCCCCCcce-EEEEECCCCCEEEEecCC---CCCcccceEeCCCEEEEECCCCcEEEEECCCCCE
Confidence 2567 999999999988776642 1222111122466788899999999999999984
No 267
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.67 E-value=5.3e-05 Score=66.02 Aligned_cols=230 Identities=10% Similarity=-0.019 Sum_probs=139.6
Q ss_pred EEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCC-eEEEeeCCCCCCCCCceEEEEECCCCceeE-EEe-cC
Q 015650 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMIWDDHQSRCIG-ELS-FR 175 (403)
Q Consensus 99 ~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~-~~~-~~ 175 (403)
+|+.+..+.|+.++++.........+. .......+.|.+. +.++.+.... +.|..+++..+.... .+. .-
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~--~~~~~~~ld~d~~~~~lyw~D~~~-----~~I~r~~~~g~~~~~~~~~~~l 78 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVG--GLEDAAAVDFVFSHGLIYWSDVSE-----EAIKRTEFNKTESVQNVVVSGL 78 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEE--EEEEEEEEEEEGGGTEEEEEETTT-----TEEEEEETTSSSCCCEEEEECC
T ss_pred EEEEEccCeEEEEECCCCceEEEEEec--CCCccEEEEEEeCCCEEEEEECCC-----CcEEEEEccCCCceEEEEcCCC
Confidence 566666667999998765311112222 2345678888763 3444444444 789999987664322 222 33
Q ss_pred CceeEEEEec-CceEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce
Q 015650 176 SEVRSVKLRR-DRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (403)
Q Consensus 176 ~~i~~~~~~~-~~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~ 251 (403)
.....+++.+ .+.+.+. .+.|.++++........+.........+++.|.+..+|++-.+ ..+.|...+++....
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSR 157 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEETTSCSC
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEcCCCCe
Confidence 4567889986 4444443 5689999986433222222333444678899877777665433 457888888887554
Q ss_pred eEEe-ecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEE
Q 015650 252 KFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHV 329 (403)
Q Consensus 252 ~~~~-~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~i 329 (403)
..+. ..-.....|++++++..|+.+.. .+. |..+|+..... +.+... .......+++.. +.++.+-...+.|..
T Consensus 158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~-I~~~d~dG~~~-~~~~~~-~~~~P~glav~~-~~lywtd~~~~~V~~ 233 (318)
T 3sov_A 158 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDGTNR-QAVVKG-SLPHPFALTLFE-DILYWTDWSTHSILA 233 (318)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSC-EEEECS-CCSCEEEEEEET-TEEEEEETTTTEEEE
T ss_pred EEEEECCCCCccEEEEeccCCEEEEEECCCCE-EEEEcCCCCce-EEEecC-CCCCceEEEEeC-CEEEEEecCCCeEEE
Confidence 4443 23345689999997777766654 455 99999864333 333321 224566777753 344555557788999
Q ss_pred EEeecCCCCCC
Q 015650 330 FNLKVNSGSAR 340 (403)
Q Consensus 330 wd~~~~~~~~~ 340 (403)
++..+++....
T Consensus 234 ~~~~~G~~~~~ 244 (318)
T 3sov_A 234 CNKYTGEGLRE 244 (318)
T ss_dssp EETTTCCSCEE
T ss_pred EECCCCCceEE
Confidence 99877775433
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.61 E-value=0.00022 Score=62.10 Aligned_cols=174 Identities=9% Similarity=-0.022 Sum_probs=115.3
Q ss_pred ceEEEEECCCCceeEEEecCCceeEEEEecCc-eEEEe---cCeEEEEEcCC---ceeee-EeeccCCCceeEEEeeCCC
Q 015650 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR-IIVVL---EQKIFVYNFAD---LKLLH-QIETIANPKGLCAVSQGVG 227 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~---d~~i~i~d~~~---~~~~~-~~~~~~~~~~~~~~~~~~~ 227 (403)
..|+..|+...+....+.....+..++|.+++ .+.+. ++.|+.+++.. +.... .+.........+++.+.++
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 57899998887766655555678899999854 44443 57899999875 12222 2322223446788888777
Q ss_pred eEEEEeeCCccCeEEEEEccCCceeEEe-ecCCceEEEEEcCCCCEEEEEeCC--CcEEEEEEcCCCcEEEEEecCCCcc
Q 015650 228 SLVLVCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSSTK--GTLVRIFNTLDGTLLQEVRRGADRA 304 (403)
Q Consensus 228 ~~~~~~~g~~d~~i~v~d~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~d--g~~i~iwd~~~~~~~~~~~~~~~~~ 304 (403)
.+|++- ...+.|.++++.......+. ........++++|.+.+|+.+... +. |..+++. |.....+... .-.
T Consensus 90 ~ly~~d--~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~-I~~~~~d-G~~~~~~~~~-~~~ 164 (316)
T 1ijq_A 90 NIYWTD--SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLN-GVDIYSLVTE-NIQ 164 (316)
T ss_dssp EEEEEE--TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE-EEEEETT-SCCEEEEECS-SCS
T ss_pred eEEEEE--CCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCe-EEEEcCC-CCCeEEEEEC-CCC
Confidence 777764 35688999999876555443 234567899999976666555443 56 8888874 4444444321 235
Q ss_pred cEEEEEeCCCCCEEEEEe-CCCcEEEEEeec
Q 015650 305 EIYSLAFSSNAQWLAVSS-DKGTVHVFNLKV 334 (403)
Q Consensus 305 ~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~ 334 (403)
....|++++++..|..+. ..+.|..+|++.
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 678999999887776554 567899999874
No 269
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=0.00012 Score=72.45 Aligned_cols=235 Identities=11% Similarity=0.034 Sum_probs=142.5
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecc----cCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEE
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE----RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~i 160 (403)
...|.+|...++|.+.+... +++.+|+..+.+........ .-....|.++....++.+.++... +-|.+
T Consensus 210 ~~~i~~i~~d~~g~lwigt~-~Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~------~Gl~~ 282 (781)
T 3v9f_A 210 GNDVRCIYKDTNGNIWIGTS-KGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATEL------NGIMI 282 (781)
T ss_dssp CSSEEEEEECTTCCEEEEET-TEEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESS------SCEEE
T ss_pred CCceeEEEEcCCCCEEEEeC-CcHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCC------CCeEE
Confidence 35689998888888776554 48999997655432111100 012356888888777776665543 34788
Q ss_pred EECCCCceeEEEe---------------cCCceeEEEEecCceEEE-e-cCeEEEEEcCCceeeeEeec----------c
Q 015650 161 WDDHQSRCIGELS---------------FRSEVRSVKLRRDRIIVV-L-EQKIFVYNFADLKLLHQIET----------I 213 (403)
Q Consensus 161 wd~~~~~~~~~~~---------------~~~~i~~~~~~~~~~~~~-~-d~~i~i~d~~~~~~~~~~~~----------~ 213 (403)
++..+++...... ....|.++...++|.+-+ + ++-|..|+..+.... .+.. .
T Consensus 283 ~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~ 361 (781)
T 3v9f_A 283 LDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFH-TWSYSPTQMNESSLS 361 (781)
T ss_dssp EETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCE-EEC----CCCSSCCS
T ss_pred ECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcce-eeccCccccccCCCC
Confidence 8877654322110 235688998888877655 5 778999997654322 2211 1
Q ss_pred CCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEE----eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcC
Q 015650 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFI----MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (403)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~----~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~ 289 (403)
...+..+....++ .+++++ .++-|..||..++....+ ......|.++...++|.+. .|+.++. |..+|..
T Consensus 362 ~~~v~~i~~d~~g-~lWigt---~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~G-l~~~~~~ 435 (781)
T 3v9f_A 362 NKVVSSVCDDGQG-KLWIGT---DGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGN-ISYYNTR 435 (781)
T ss_dssp SSCEEEEEECTTS-CEEEEE---BSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEE-EEETTEE-EEEECSS
T ss_pred CcceEEEEEcCCC-CEEEEe---CCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEE-EEeccCC-EEEEcCC
Confidence 2234444444333 445543 456688888776544322 1234578999988888755 4676667 9999987
Q ss_pred CCcEEEEEec-CCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 290 DGTLLQEVRR-GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 290 ~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
+++.. .+.. ......|.++...++|.+++. +. +-|..||..+++
T Consensus 436 ~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 436 LKKFQ-IIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKK 480 (781)
T ss_dssp SCEEE-ECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSS
T ss_pred CCcEE-EeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCe
Confidence 76543 3321 113357999999888876554 44 458888887655
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.59 E-value=0.00012 Score=61.11 Aligned_cols=197 Identities=7% Similarity=0.038 Sum_probs=122.1
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEc-CCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCce
Q 015650 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (403)
Q Consensus 80 ~~~~~~~~i~~i~~s~d~~~l~~~~-~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (403)
.+.+-...+..++|+|++..|.+.. +.+ |...|.. ++......+. .....-.+++.+++.++++...+ +.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~--g~~D~EGIa~~~~g~~~vs~E~~-----~~ 92 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLD--FVKDLETIEYIGDNQFVISDERD-----YA 92 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECS--SCSSEEEEEECSTTEEEEEETTT-----TE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecC--CCCChHHeEEeCCCEEEEEECCC-----Cc
Confidence 3445556799999999877665544 433 6667765 4433222232 33556777777888887776666 78
Q ss_pred EEEEECCCCce---eEEEe-------cCCceeEEEEecCce-EEE-ec-C--eEEEEEc-CCceeeeEeec-------cC
Q 015650 158 VMIWDDHQSRC---IGELS-------FRSEVRSVKLRRDRI-IVV-LE-Q--KIFVYNF-ADLKLLHQIET-------IA 214 (403)
Q Consensus 158 i~iwd~~~~~~---~~~~~-------~~~~i~~~~~~~~~~-~~~-~d-~--~i~i~d~-~~~~~~~~~~~-------~~ 214 (403)
+.++++..... +.... .......++|.|++. +++ .+ . .|+.|+- .....+..+.. ..
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~ 172 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTL 172 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCS
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccccc
Confidence 99998765542 22222 223458999999863 333 22 2 4555551 01111222211 22
Q ss_pred CCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeecC---------CceEEEEEcCCCCEEEEEeCCCcEEEE
Q 015650 215 NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHD---------SRIACFALTQDGQLLATSSTKGTLVRI 285 (403)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~---------~~i~~~~~sp~g~~l~s~~~dg~~i~i 285 (403)
.....+++.|..+++++++ .....+.++|...+.+..+.-.. .....|+|.++|++.+ .++.+. +++
T Consensus 173 ~d~S~l~~dp~tg~lliLS--~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~-~y~ 248 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLS--HESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNR-FYR 248 (255)
T ss_dssp SCCCEEEEETTTTEEEEEE--TTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTE-EEE
T ss_pred CCceeEEEcCCCCeEEEEE--CCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCce-EEE
Confidence 3467899999988888876 46788999998876554443221 2568999999998544 466666 777
Q ss_pred EEc
Q 015650 286 FNT 288 (403)
Q Consensus 286 wd~ 288 (403)
|.-
T Consensus 249 f~~ 251 (255)
T 3qqz_A 249 FTP 251 (255)
T ss_dssp EEC
T ss_pred EEe
Confidence 754
No 271
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.59 E-value=4.7e-05 Score=66.60 Aligned_cols=180 Identities=8% Similarity=0.046 Sum_probs=109.2
Q ss_pred EEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEec---------------------CCceeEEEEec-CceE
Q 015650 132 VVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF---------------------RSEVRSVKLRR-DRII 189 (403)
Q Consensus 132 v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~---------------------~~~i~~~~~~~-~~~~ 189 (403)
...+++.+++..+.++..+ +.|..|+..+++.. .+.. ...+..+++.+ ++.+
T Consensus 21 p~~i~~d~~g~~l~v~~~~-----~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l 94 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQD-----GRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQL 94 (322)
T ss_dssp CCCEECCTTCSSEEEECTT-----SEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEE
T ss_pred ceEEEEcCCCCEEEEEcCC-----CeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcE
Confidence 3456677776534444444 78999987665432 2221 13578899997 7776
Q ss_pred EEe--cCeEEEEEcCCceeeeEeecc-----CCCceeEEEee-CCCeEEEEeeC---------------CccCeEEEEEc
Q 015650 190 VVL--EQKIFVYNFADLKLLHQIETI-----ANPKGLCAVSQ-GVGSLVLVCPG---------------LQKGQVRVEHY 246 (403)
Q Consensus 190 ~~~--d~~i~i~d~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~g---------------~~d~~i~v~d~ 246 (403)
++. .+.|..+|..+++. ..+... ......+++.+ ++ .++++..+ ..++.|..||.
T Consensus 95 ~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp EEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred EEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 664 45688898765542 222111 12335577777 65 45555422 12367888888
Q ss_pred cCCceeEEeecCCceEEEEEcCCCCEEEEE-eCCCcEEEEEEcCCCc--EEEEEecCCCcccEEEEEeCCCCCEEEEEeC
Q 015650 247 ASKRTKFIMAHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDGT--LLQEVRRGADRAEIYSLAFSSNAQWLAVSSD 323 (403)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~-~~dg~~i~iwd~~~~~--~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~ 323 (403)
.++....+.........++++|+|++|+.+ ...+. |++|++.... ....+.. ..+ ...|++.++|.++++...
T Consensus 173 ~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~-I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 173 STKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQ-IVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTE-EEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCe-EEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEecC
Confidence 776655443333445789999999976655 45567 9999987421 1222221 123 788999999987766544
No 272
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.58 E-value=0.00015 Score=71.05 Aligned_cols=230 Identities=9% Similarity=-0.068 Sum_probs=138.6
Q ss_pred CEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEEEECCCC----ceeEEE
Q 015650 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQS----RCIGEL 172 (403)
Q Consensus 98 ~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~~~----~~~~~~ 172 (403)
.+|+......|+..+++..... ..+. ....+..+++.. ++.++++.... +.|+.+++... .....+
T Consensus 396 p~Ll~an~~~Ir~i~l~~~~~~--~l~~--~~~~~~gl~~d~~~~~lY~sD~~~-----~~I~~~~l~g~~~~~~~~~vi 466 (791)
T 3m0c_C 396 AYLFFTNRHEVRKMTLDRSEYT--SLIP--NLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVI 466 (791)
T ss_dssp CEEEEECBSSEEEECTTSCCCE--EEEC--SCSSEEEEEEETTTTEEEEEETTT-----TEEEEEEC--------CEEEE
T ss_pred cccccccccceeEeeccCCcce--eeec--CCCceEEEeecccCCeeEEeeccc-----eeEEEEeccCCCCCcceeEEE
Confidence 4566666666888888655433 2222 344567788876 34444444444 78888887653 222333
Q ss_pred e-cCCceeEEEEecCc-eEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEcc
Q 015650 173 S-FRSEVRSVKLRRDR-IIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (403)
Q Consensus 173 ~-~~~~i~~~~~~~~~-~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~ 247 (403)
. .......|++.+.+ .++++ .+.|.+.++........+.........+++.|....+|++-.| ..+.|.+.++.
T Consensus 467 ~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g-~~~~I~~~~~d 545 (791)
T 3m0c_C 467 SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLN 545 (791)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETT
T ss_pred ecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCC-CCCeEEEEecC
Confidence 3 34567789998765 33333 5789999987544333333333445789999988887776534 34789999998
Q ss_pred CCceeEEee-cCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCC
Q 015650 248 SKRTKFIMA-HDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG 325 (403)
Q Consensus 248 ~~~~~~~~~-~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg 325 (403)
......+.. .-.....|++++.+..|+.+.. ... |..+++........+.....-....+|++..+ .++++-...+
T Consensus 546 G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~-I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~ 623 (791)
T 3m0c_C 546 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINE 623 (791)
T ss_dssp SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTT
T ss_pred CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc-EEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCC
Confidence 866655543 3357889999987777766654 445 99999865444333332111234456766332 3344444667
Q ss_pred cEEEEEeecCCCCC
Q 015650 326 TVHVFNLKVNSGSA 339 (403)
Q Consensus 326 ~v~iwd~~~~~~~~ 339 (403)
.|...+..+++...
T Consensus 624 ~I~~~dk~tG~~~~ 637 (791)
T 3m0c_C 624 AIFSANRLTGSDVN 637 (791)
T ss_dssp EEEEEETTTCCCCE
T ss_pred EEEEEeCCCCcceE
Confidence 78777776765543
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.58 E-value=0.00011 Score=66.12 Aligned_cols=174 Identities=10% Similarity=-0.018 Sum_probs=114.4
Q ss_pred ceEEEEECCCCceeEEEecCCceeEEEEecC-ceEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEE
Q 015650 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRD-RIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (403)
..|+.+++........+.....+..++|.+. +.++++ .+.|+.+++........+.........+++.+.+..+|+
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~ 175 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 175 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEE
Confidence 5688888876665544555566889999974 444443 578999998765443333333334467889888888777
Q ss_pred EeeCCccCeEEEEEccCCceeEEe-ecCCceEEEEEcCCCCEEEEEeC-C-CcEEEEEEcCCCcEEEEEecCCCcccEEE
Q 015650 232 VCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSST-K-GTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~-d-g~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (403)
+- ...+.|.+.++.......+. ..-.....++++|.+.+|+.... . +. |..+++........+.. .-...+.
T Consensus 176 ~d--~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~-I~r~~~dG~~~~~~~~~--~~~~PnG 250 (386)
T 3v65_B 176 TD--SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMDGSGRRIIADT--HLFWPNG 250 (386)
T ss_dssp EE--TTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCSCEEEECS--SCSCEEE
T ss_pred Ec--CCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCE-EEEEeCCCCCcEEEEEC--CCCCeee
Confidence 65 34578888888775544443 33356789999997776665544 3 56 88888754333322222 2345789
Q ss_pred EEeCCCCCEEEEEe-CCCcEEEEEeec
Q 015650 309 LAFSSNAQWLAVSS-DKGTVHVFNLKV 334 (403)
Q Consensus 309 l~~s~d~~~l~s~~-~dg~v~iwd~~~ 334 (403)
|+|+|++..|..+. ..+.|..++++.
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred EEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 99998777766554 567788888754
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.57 E-value=0.00022 Score=63.05 Aligned_cols=174 Identities=10% Similarity=-0.004 Sum_probs=113.7
Q ss_pred ceEEEEECCCCceeEEEecCCceeEEEEecC-ceEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEE
Q 015650 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRD-RIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (403)
..|+..++........+.....+..++|.+. +.++.+ .+.|+.+++........+.........+++.+.+..+|+
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~ 132 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 132 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEE
T ss_pred cceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEE
Confidence 5688888766554444444556889999974 444443 578999998765433333332334467889888888777
Q ss_pred EeeCCccCeEEEEEccCCceeEEe-ecCCceEEEEEcCCCCEEEEEe-CC-CcEEEEEEcCCCcEEEEEecCCCcccEEE
Q 015650 232 VCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSS-TK-GTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~-~d-g~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (403)
+- ...+.|.+.+++......+. ..-.....++++|.+..|+... .. +. |..+++.. .....+... .-...+.
T Consensus 133 ~d--~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~-I~r~~~dG-~~~~~~~~~-~~~~PnG 207 (349)
T 3v64_C 133 TD--SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMDG-SGRRIIADT-HLFWPNG 207 (349)
T ss_dssp EE--TTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETTS-CSCEESCCS-SCSCEEE
T ss_pred Ec--CCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCE-EEEEeCCC-CCcEEEEEC-CCCCcce
Confidence 65 34678999998876554443 3335678999999666665544 34 56 88888754 333333211 2346789
Q ss_pred EEeCCCCCEEEEEe-CCCcEEEEEeec
Q 015650 309 LAFSSNAQWLAVSS-DKGTVHVFNLKV 334 (403)
Q Consensus 309 l~~s~d~~~l~s~~-~dg~v~iwd~~~ 334 (403)
|+++|++..|..+. ..+.|..++++.
T Consensus 208 la~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 208 LTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 99998777766554 567788888764
No 275
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.56 E-value=0.00035 Score=61.87 Aligned_cols=230 Identities=13% Similarity=0.166 Sum_probs=153.6
Q ss_pred EEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEee-eCCeEEEeeCCCCCCCCCceEEEEECCC-Cce
Q 015650 91 ISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNKVMIWDDHQ-SRC 168 (403)
Q Consensus 91 i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~s~~~d~~~~~~~i~iwd~~~-~~~ 168 (403)
.-.+|..+.||.-....+.|||+++..++....+. ..|.-+.| +++.+.+++. ..|+-|++.. ..+
T Consensus 71 AIMnP~~~iiALrag~~lQiFnle~K~klks~~~~----e~VvfWkWis~~~l~lVT~--------taVyHWsi~~~s~P 138 (494)
T 1bpo_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT----DDVTFWKWISLNTVALVTD--------NAVYHWSMEGESQP 138 (494)
T ss_dssp EEECSSSSCEEEEETTEEEEEETTTTEEEEEEECS----SCCCEEEEEETTEEEEECS--------SEEEEEESSSSCCC
T ss_pred eeeCCCCcEEEEecCCeEEEEchHHhhhhcceecC----CCceEEEecCCCeEEEEcC--------CeeEEecccCCCCc
Confidence 34678888888777667999999998887555553 46777777 5677778876 6899999874 356
Q ss_pred eEEEe-c----CCceeEEEEecCceEEE----------ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCC--eE-E
Q 015650 169 IGELS-F----RSEVRSVKLRRDRIIVV----------LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG--SL-V 230 (403)
Q Consensus 169 ~~~~~-~----~~~i~~~~~~~~~~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~ 230 (403)
++.+. | ...|..-..+++.++++ ..|.+.+|..+.+ .-+.+++|......+.+.-+.. .+ .
T Consensus 139 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~ 217 (494)
T 1bpo_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFC 217 (494)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEE
T ss_pred hhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEE
Confidence 67776 3 45677778888888877 2578899997653 3455566544332222211111 11 1
Q ss_pred EEeeCCccCeEEEEEccCC-----ce--eEEe------ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEE
Q 015650 231 LVCPGLQKGQVRVEHYASK-----RT--KFIM------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEV 297 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~~-----~~--~~~~------~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~ 297 (403)
++.-....+.+++.++... .. +... ...+-..++..++.-..++.-+.-|. |.+||++++.++..-
T Consensus 218 fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~-i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMN 296 (494)
T ss_dssp EEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCce-EEEEecccceeeeee
Confidence 2221222378999888542 01 1111 12344567888888888888999999 999999999999877
Q ss_pred ecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 298 RRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 298 ~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
+- ....|..-+-.....-++.....|.|.--.++..+
T Consensus 297 rI--s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 297 RI--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EC--CSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred cc--cCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 75 34566665555555566666789988888887765
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.55 E-value=4.5e-06 Score=80.74 Aligned_cols=239 Identities=7% Similarity=-0.072 Sum_probs=125.4
Q ss_pred EEEEcC-CCCEEEEEcC-C-----------cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC-CCCCCCC
Q 015650 90 HISFNQ-DHGCFAAGTD-H-----------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG-PDPQYPL 155 (403)
Q Consensus 90 ~i~~s~-d~~~l~~~~~-~-----------~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~~~~ 155 (403)
++++.+ ++++++.|+. . .+.+||..+.+-.....+...+.......++..++.+++.++ .+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~----- 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA----- 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-----
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-----
Confidence 456777 8888888752 1 277888876653322222211222222344555555555555 44
Q ss_pred ceEEEEECCCCceeEEEe--cCCceeEEEEecCceEEEec---------CeEEEEEcCCceeeeEe----eccCCCceeE
Q 015650 156 NKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVVLE---------QKIFVYNFADLKLLHQI----ETIANPKGLC 220 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~d---------~~i~i~d~~~~~~~~~~----~~~~~~~~~~ 220 (403)
..+.+||..+++-...-. ....-.+++..+++++++.. ..+.+||..+.+-...- ..........
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~ 344 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQG 344 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTG
T ss_pred CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccc
Confidence 689999988775433222 22222355666677776632 36899999876432210 0000000000
Q ss_pred EEeeCCCeEEEEeeCC--------ccCeEEEEEccCCceeEE-eecC---------CceEEEEEcC-CCCEEEEEeCCC-
Q 015650 221 AVSQGVGSLVLVCPGL--------QKGQVRVEHYASKRTKFI-MAHD---------SRIACFALTQ-DGQLLATSSTKG- 280 (403)
Q Consensus 221 ~~~~~~~~~~~~~~g~--------~d~~i~v~d~~~~~~~~~-~~~~---------~~i~~~~~sp-~g~~l~s~~~dg- 280 (403)
.+.. ++.+++. .|. ....+..||..+...... ..+. ..-.++.|.. ++++++.|+.++
T Consensus 345 ~~~~-~~~iyv~-Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 345 LYRS-DNHAWLF-GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp GGTT-TCSCCEE-ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred eeec-CCceEEE-ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 0111 1222222 121 234677888877542221 1111 1234455543 788888887542
Q ss_pred ----------cEEEEEEcCCCcEEEEE-ecCCCcccEEEEEeCCCCCEEEEEeCC-----------CcEEEEEeecCC
Q 015650 281 ----------TLVRIFNTLDGTLLQEV-RRGADRAEIYSLAFSSNAQWLAVSSDK-----------GTVHVFNLKVNS 336 (403)
Q Consensus 281 ----------~~i~iwd~~~~~~~~~~-~~~~~~~~v~~l~~s~d~~~l~s~~~d-----------g~v~iwd~~~~~ 336 (403)
. |.+||..+.+..... ........-.++...|++++++.|+.+ ..+.+||..+.+
T Consensus 423 ~~~~~~~~~~~-v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 423 QDSDATTNAHI-ITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SSSBCCCCEEE-EECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCCcCCcceE-EEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 4 888888776654433 011111122345666899999999854 457888876654
No 277
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.54 E-value=0.00021 Score=67.81 Aligned_cols=195 Identities=9% Similarity=0.131 Sum_probs=114.6
Q ss_pred CCCEEEEEcCCcEEEEEcCCCeeEEEEecccCccee------EEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCcee
Q 015650 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIG------VVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI 169 (403)
Q Consensus 96 d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~ 169 (403)
++.+++.+..+.|..+|..+++.+............ ...+....+..++.+ .+ +.|.-+|.++|+.+
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t--~d-----g~l~AlD~~TG~~~ 140 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT--LD-----ASVVALNKNTGKVV 140 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE--TT-----TEEEEEESSSCCEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe--CC-----CEEEEEECCCCCEE
Confidence 555555555455888899888888766554111100 011223334443433 34 89999999999998
Q ss_pred EEEecCC-----cee-EEEEecC---c--eEEE-e-------cCeEEEEEcCCceeeeEeeccCCC--------------
Q 015650 170 GELSFRS-----EVR-SVKLRRD---R--IIVV-L-------EQKIFVYNFADLKLLHQIETIANP-------------- 216 (403)
Q Consensus 170 ~~~~~~~-----~i~-~~~~~~~---~--~~~~-~-------d~~i~i~d~~~~~~~~~~~~~~~~-------------- 216 (403)
..+.... .+. ...+..+ + .+++ . ++.|+.+|.++|+.+.........
T Consensus 141 W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~ 220 (582)
T 1flg_A 141 WKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGD 220 (582)
T ss_dssp EEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSC
T ss_pred eeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccc
Confidence 8776211 121 1122222 2 3444 2 689999999999988765431100
Q ss_pred ---------------------------ceeEEEeeCCCeEEEEeeCC-----------c-------c----CeEEEEEcc
Q 015650 217 ---------------------------KGLCAVSQGVGSLVLVCPGL-----------Q-------K----GQVRVEHYA 247 (403)
Q Consensus 217 ---------------------------~~~~~~~~~~~~~~~~~~g~-----------~-------d----~~i~v~d~~ 247 (403)
-...++.+..+.+|+.+ +. . | +.|..+|.+
T Consensus 221 ~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~-gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~ 299 (582)
T 1flg_A 221 VKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGA-GNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPS 299 (582)
T ss_dssp TTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEE-CCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTT
T ss_pred cccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeC-CCCCcccCcccccCCCcccccCCcccceEEEEeCC
Confidence 01245566666666554 21 1 2 589999998
Q ss_pred CCceeEEe---ecCC-------ceEEEEEc-CCCC---EEEEEeCCCcEEEEEEcCCCcEEEEEec
Q 015650 248 SKRTKFIM---AHDS-------RIACFALT-QDGQ---LLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (403)
Q Consensus 248 ~~~~~~~~---~~~~-------~i~~~~~s-p~g~---~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (403)
+++..-.. .|.. ...-+... .+|+ +++.++.+|. ++++|..+|+.+..+..
T Consensus 300 TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 300 SGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGF-FYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp TCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSE-EEEEETTTCCEEEEEES
T ss_pred CCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCce-EEEEECCCCCEeccccc
Confidence 87765432 2321 11111221 4674 7888999999 99999999999877654
No 278
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.52 E-value=5.7e-05 Score=65.48 Aligned_cols=172 Identities=13% Similarity=0.213 Sum_probs=112.9
Q ss_pred ceEEEEECCCCceeEEEecCCceeEEEEecCce-------E-EE---e--cCeEEEEEcC--CceeeeEeec-------c
Q 015650 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRI-------I-VV---L--EQKIFVYNFA--DLKLLHQIET-------I 213 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~-------~-~~---~--d~~i~i~d~~--~~~~~~~~~~-------~ 213 (403)
+-+.+||+ +|+.++.+.. ..++.+..-|+-. + ++ . +++|.+|++. ++ .+..+.. .
T Consensus 50 ~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 50 SGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSMTDPDHPIATA 126 (355)
T ss_dssp TEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEECSCTTSCEECC
T ss_pred CCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeeccccccCcCCC
Confidence 78999998 8998888764 6678887777421 2 22 3 4789999773 33 3444411 1
Q ss_pred CCCceeEEE--eeCCCeEEEEeeCCccCeEEEEEccC---C-----ceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEE
Q 015650 214 ANPKGLCAV--SQGVGSLVLVCPGLQKGQVRVEHYAS---K-----RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLV 283 (403)
Q Consensus 214 ~~~~~~~~~--~~~~~~~~~~~~g~~d~~i~v~d~~~---~-----~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i 283 (403)
.....-+|+ ++....+++... ..+|.+..|++.. + .++.+. ..+.+..+...+...+|+.+-++.. |
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~-~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~G-I 203 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVT-GKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEA-I 203 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEE-CSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTE-E
T ss_pred CCCeeEEEEEecCCCCcEEEEEE-CCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccce-E
Confidence 134455666 554444444433 4779999998843 2 123333 3567889999998899999999987 8
Q ss_pred EEEEcC-----CCcEEEEEecCCCcccEEEEEe--CCCCC-EEEEEe-CCCcEEEEEee
Q 015650 284 RIFNTL-----DGTLLQEVRRGADRAEIYSLAF--SSNAQ-WLAVSS-DKGTVHVFNLK 333 (403)
Q Consensus 284 ~iwd~~-----~~~~~~~~~~~~~~~~v~~l~~--s~d~~-~l~s~~-~dg~v~iwd~~ 333 (403)
+.++.+ +++.+..+........+..|++ .++++ +|++++ .++++.+||.+
T Consensus 204 w~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 204 WKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 888865 3456655533222346888887 56666 666666 67799999996
No 279
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.52 E-value=0.00011 Score=66.97 Aligned_cols=238 Identities=10% Similarity=0.016 Sum_probs=139.1
Q ss_pred CCeEEEEEcCC---CCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEE
Q 015650 86 PTLLHISFNQD---HGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (403)
Q Consensus 86 ~~i~~i~~s~d---~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd 162 (403)
.....|+|+|+ +.++++-..+.|+.++..++... ... ........+++++++.++++....... ...+...+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~--~~~--~~~~~P~giavd~dG~lyVad~~~~~~-~~gv~~~~ 213 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD--IKT--TNIGQCADVNFTLNGDMVVVDDQSSDT-NTGIYLFT 213 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE--EEC--CCCSCEEEEEECTTCCEEEEECCSCTT-SEEEEEEC
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE--Eee--cCCCCccEEEECCCCCEEEEcCCCCcc-cceEEEEE
Confidence 34678999985 44444433455999988665543 222 234457788888887755554311000 01233333
Q ss_pred CCCCce-eEEEecCCceeEEEEec-CceEEEe---cCeEEEEEcCCceeeeEe-eccC-CCceeEEEeeCCCeEEEEeeC
Q 015650 163 DHQSRC-IGELSFRSEVRSVKLRR-DRIIVVL---EQKIFVYNFADLKLLHQI-ETIA-NPKGLCAVSQGVGSLVLVCPG 235 (403)
Q Consensus 163 ~~~~~~-~~~~~~~~~i~~~~~~~-~~~~~~~---d~~i~i~d~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g 235 (403)
...+.. ...+..-.....+++.+ ++.+.+. ++.|+.+|..++.....+ .... .....++++++++.+|++-
T Consensus 214 ~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad-- 291 (433)
T 4hw6_A 214 RASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY-- 291 (433)
T ss_dssp GGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE--
T ss_pred CCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe--
Confidence 222211 11222334556788999 7776663 578999998877652332 2111 1223599999998777775
Q ss_pred CccCeEEEEEccC--Cce---eEEeec---------------CCceEEEEE---------cCCCCEEEEEeCCCcEEEEE
Q 015650 236 LQKGQVRVEHYAS--KRT---KFIMAH---------------DSRIACFAL---------TQDGQLLATSSTKGTLVRIF 286 (403)
Q Consensus 236 ~~d~~i~v~d~~~--~~~---~~~~~~---------------~~~i~~~~~---------sp~g~~l~s~~~dg~~i~iw 286 (403)
...+.|+.+++.. +.+ ..+.+. -.....+++ .++|.++++-...+. |+.+
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~-I~~~ 370 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT-VRVL 370 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE-EEEE
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCE-EEEE
Confidence 3567899988763 221 222221 123567899 777777666666666 9999
Q ss_pred EcCCCcEEEEEecCCC----------------cccEEEEEeC-CCCCEEEEEeCCCcEEEEEee
Q 015650 287 NTLDGTLLQEVRRGAD----------------RAEIYSLAFS-SNAQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 287 d~~~~~~~~~~~~~~~----------------~~~v~~l~~s-~d~~~l~s~~~dg~v~iwd~~ 333 (403)
+. ++... ++.+... -.....|+++ ++|.++++=...+.|+.++++
T Consensus 371 ~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 371 TP-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CC-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 84 66443 3332100 1236789999 566666665677788888765
No 280
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.50 E-value=0.00032 Score=58.45 Aligned_cols=198 Identities=11% Similarity=0.104 Sum_probs=126.4
Q ss_pred EecccCcceeEEEEeeeCC-eEEEeeCCCCCCCCCceEEEEECCCCceeEEEec--CCceeEEEEecCceEEEe---cCe
Q 015650 122 RDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF--RSEVRSVKLRRDRIIVVL---EQK 195 (403)
Q Consensus 122 ~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~---d~~ 195 (403)
+.+. +-...+..++++++ +.+++....+ +.|...|.. ++.++.+.. ......|++.+++.+++. ++.
T Consensus 20 ~~l~-g~~~~lSGla~~~~~~~L~aV~d~~-----~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~ 92 (255)
T 3qqz_A 20 KEIA-GITNNISSLTWSAQSNTLFSTINKP-----AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYA 92 (255)
T ss_dssp EECT-TCCSCEEEEEEETTTTEEEEEEETT-----EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTE
T ss_pred eECC-CcccCcceeEEeCCCCEEEEEECCC-----CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCc
Confidence 4555 45557999999975 3444444446 899999987 888888863 357889999999988663 568
Q ss_pred EEEEEcCCcee---eeEeec------cCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccC----CceeEEe-------
Q 015650 196 IFVYNFADLKL---LHQIET------IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS----KRTKFIM------- 255 (403)
Q Consensus 196 i~i~d~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~----~~~~~~~------- 255 (403)
+.++++..... +..... .......+++.+.++.++++. +.....+|.++. .....+.
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~---E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~ 169 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK---EKNPIEVYKVNGLLSSNELHISKDKALQRQ 169 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE---ESSSEEEEEEESTTCSSCCEEEECHHHHHT
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE---CcCCceEEEEcccccCCceeeecchhhccc
Confidence 99998765432 222221 122346899999998888875 223344444432 2222221
Q ss_pred ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCC--C-----cccEEEEEeCCCCCEEEEEeCCCcEE
Q 015650 256 AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA--D-----RAEIYSLAFSSNAQWLAVSSDKGTVH 328 (403)
Q Consensus 256 ~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~--~-----~~~v~~l~~s~d~~~l~s~~~dg~v~ 328 (403)
.+...+.+++++|....|+.-+.....|.++|. +++.+..+.... + -..--.|+|.++|++.++ ++.+.++
T Consensus 170 ~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y 247 (255)
T 3qqz_A 170 FTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFY 247 (255)
T ss_dssp CCSSCCCEEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEE
T ss_pred cccCCceeEEEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEE
Confidence 123457899999976666555555444889995 466666655321 1 125689999999985544 6776555
Q ss_pred EEE
Q 015650 329 VFN 331 (403)
Q Consensus 329 iwd 331 (403)
.|.
T Consensus 248 ~f~ 250 (255)
T 3qqz_A 248 RFT 250 (255)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 281
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.50 E-value=0.0002 Score=67.87 Aligned_cols=194 Identities=12% Similarity=0.147 Sum_probs=113.7
Q ss_pred CCCEEEEEc-CCcEEEEEc-CCCeeEEEEecccCcce--------eEEEEee--eCCe--EEEeeCCCCCCCCCceEEEE
Q 015650 96 DHGCFAAGT-DHGFRIYNC-DPFREIFRRDFERGGGI--------GVVEMLF--RCNI--LALVGGGPDPQYPLNKVMIW 161 (403)
Q Consensus 96 d~~~l~~~~-~~~i~iw~~-~~~~~~~~~~~~~~~~~--------~v~~~~~--~~~~--~~~~s~~~d~~~~~~~i~iw 161 (403)
++.+++++. ++.|.-+|. .+++.+....+...... ....+.+ ..+. ..++.+..+ +.|.-+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d-----g~l~Al 136 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD-----GNVAAL 136 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT-----SEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC-----CEEEEE
Confidence 444444444 455888888 78888766655311100 0112233 2222 012233344 899999
Q ss_pred ECCCCceeEEEecCC-----ceeE-EEEecCceEEE-e-------cCeEEEEEcCCceeeeEeeccCCCc----------
Q 015650 162 DDHQSRCIGELSFRS-----EVRS-VKLRRDRIIVV-L-------EQKIFVYNFADLKLLHQIETIANPK---------- 217 (403)
Q Consensus 162 d~~~~~~~~~~~~~~-----~i~~-~~~~~~~~~~~-~-------d~~i~i~d~~~~~~~~~~~~~~~~~---------- 217 (403)
|..+|+.+....... .+.+ ..+ .++.+++ . ++.|+.+|.++|+.+..+.......
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~ 215 (599)
T 1w6s_A 137 NAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNI 215 (599)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTT
T ss_pred ECCCCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccc
Confidence 999999988776221 2221 122 2566655 3 5899999999999988775432110
Q ss_pred ----------------------------eeEEEeeCCCeEEEEeeCCc--------------cCeEEEEEccCCceeEEe
Q 015650 218 ----------------------------GLCAVSQGVGSLVLVCPGLQ--------------KGQVRVEHYASKRTKFIM 255 (403)
Q Consensus 218 ----------------------------~~~~~~~~~~~~~~~~~g~~--------------d~~i~v~d~~~~~~~~~~ 255 (403)
...++.+..+.+|+.+ +.. .+.|..+|.++++..-..
T Consensus 216 ~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~-g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~ 294 (599)
T 1w6s_A 216 KNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT-GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY 294 (599)
T ss_dssp TCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC-CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE
T ss_pred ccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC-CCCccccCcccCCCccccceEEEEeCCCCceeeEe
Confidence 1245556666555544 321 247889999987764322
Q ss_pred ---ecCC--------ceEEEEEc-CCC---CEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 256 ---AHDS--------RIACFALT-QDG---QLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 256 ---~~~~--------~i~~~~~s-p~g---~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
.|.. ++. +... .+| ..++.++.+|. ++++|.++|+.+....
T Consensus 295 q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 295 QKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGI-VYTLDRTDGALVSANK 350 (599)
T ss_dssp ESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSE-EEEEETTTCCEEEEEE
T ss_pred ecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcE-EEEEECCCCCEeeccc
Confidence 2211 111 2222 467 56777889999 9999999999987765
No 282
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.49 E-value=0.00054 Score=60.71 Aligned_cols=218 Identities=13% Similarity=0.175 Sum_probs=141.3
Q ss_pred cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecC
Q 015650 107 GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD 186 (403)
Q Consensus 107 ~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~ 186 (403)
.|.|.|+........+.+. ....| |.+...-.++=. + ..+.|+|+++.+.++.+...+.|.-=.|-.+
T Consensus 49 ~vvIiDl~~~~~~~rrpi~--AdsAI--MnP~~~iiALra-g-------~~lQiFnle~K~klks~~~~e~VvfWkWis~ 116 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRPIS--ADSAI--MNPASKVIALKA-G-------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISL 116 (494)
T ss_dssp EEEEEETTSTTSCEEEECC--CSEEE--ECSSSSCEEEEE-T-------TEEEEEETTTTEEEEEEECSSCCCEEEEEET
T ss_pred eEEEEECCCCCcceecccc--cceee--eCCCCcEEEEec-C-------CeEEEEchHHhhhhcceecCCCceEEEecCC
Confidence 3889999876666555554 22222 222223333333 2 7999999999999999997777877777665
Q ss_pred ceE-EEecCeEEEEEcCC-ceeeeEeeccC--CCceeEEEeeCCCeEEEEeeC------CccCeEEEEEccCCceeEEee
Q 015650 187 RII-VVLEQKIFVYNFAD-LKLLHQIETIA--NPKGLCAVSQGVGSLVLVCPG------LQKGQVRVEHYASKRTKFIMA 256 (403)
Q Consensus 187 ~~~-~~~d~~i~i~d~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g------~~d~~i~v~d~~~~~~~~~~~ 256 (403)
..+ ++++..|+-|++.. ..+.+.+..|. .....+.+..+.+..+++..| .-.|.+.+|..+.+..+.+.+
T Consensus 117 ~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieG 196 (494)
T 1bpo_A 117 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (494)
T ss_dssp TEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECC
T ss_pred CeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchhee
Confidence 554 44899999999974 34555554432 234455554444443433322 235789999999999999999
Q ss_pred cCCceEEEEEcCCC---CEEEEEeCC---CcEEEEEEcCCC--------cEEEEEe--cCCCcccEEEEEeCCCCCEEEE
Q 015650 257 HDSRIACFALTQDG---QLLATSSTK---GTLVRIFNTLDG--------TLLQEVR--RGADRAEIYSLAFSSNAQWLAV 320 (403)
Q Consensus 257 ~~~~i~~~~~sp~g---~~l~s~~~d---g~~i~iwd~~~~--------~~~~~~~--~~~~~~~v~~l~~s~d~~~l~s 320 (403)
|......+.+.-+. .+++.+... +. ++|-++... +....+. ......--.++..++....+..
T Consensus 197 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~k-Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp SEEEEEEEECTTCSSEEEEEEEEECSTTCCE-EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcE-EEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence 98776666553221 244444442 55 999988532 1111111 1111234567888888889999
Q ss_pred EeCCCcEEEEEeecCCC
Q 015650 321 SSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 321 ~~~dg~v~iwd~~~~~~ 337 (403)
-+.-|.|++||+.++..
T Consensus 276 iTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 276 ITKYGYIHLYDLETGTC 292 (494)
T ss_dssp EETTSEEEEEETTTCCE
T ss_pred EecCceEEEEeccccee
Confidence 99999999999999984
No 283
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.47 E-value=0.00017 Score=65.77 Aligned_cols=237 Identities=10% Similarity=0.109 Sum_probs=135.8
Q ss_pred CeEEEEEcC-CCCEEEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeE-EEeeCCCCCCCCCceEEEEEC
Q 015650 87 TLLHISFNQ-DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDD 163 (403)
Q Consensus 87 ~i~~i~~s~-d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~~~~~~i~iwd~ 163 (403)
....|+++| ++..|.++. .+.|+.++.+...... ... .......+++++++. ++++...... ....+.+++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~--~~~--~~~~P~~ia~d~~G~~lyvad~~~~~-~~~~v~~~~- 211 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST--VYS--GLSKVRTICWTHEADSMIITNDQNNN-DRPNNYILT- 211 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE--EEC--CCSCEEEEEECTTSSEEEEEECCSCT-TSEEEEEEE-
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE--Eec--CCCCcceEEEeCCCCEEEEEeCCCCc-ccceEEEEe-
Confidence 567889998 344454444 4458888887654332 222 344567888888765 4444332100 001344344
Q ss_pred CCCcee--EEEecCCceeEEEEec-CceEEEe---cCeEEEEEcCCceeeeEeecc-CCCceeEEEeeCCCeEEEEeeCC
Q 015650 164 HQSRCI--GELSFRSEVRSVKLRR-DRIIVVL---EQKIFVYNFADLKLLHQIETI-ANPKGLCAVSQGVGSLVLVCPGL 236 (403)
Q Consensus 164 ~~~~~~--~~~~~~~~i~~~~~~~-~~~~~~~---d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~ 236 (403)
..+... ..+........++++| ++.+++. ++.|+.++...+......... ...-..++++++++.+|++- .
T Consensus 212 ~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d--~ 289 (430)
T 3tc9_A 212 RESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV--V 289 (430)
T ss_dssp GGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE--T
T ss_pred CCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE--C
Confidence 334332 3333334567888999 6776663 678999998766542222221 22346799999998777765 4
Q ss_pred ccCeEEEEEccCC--c---eeEEeec---------------CCceE-EEEEc--------CCCCEEEEEeCCCcEEEEEE
Q 015650 237 QKGQVRVEHYASK--R---TKFIMAH---------------DSRIA-CFALT--------QDGQLLATSSTKGTLVRIFN 287 (403)
Q Consensus 237 ~d~~i~v~d~~~~--~---~~~~~~~---------------~~~i~-~~~~s--------p~g~~l~s~~~dg~~i~iwd 287 (403)
..+.|..++.+.. . ...+.+. -.... .++.. ++|.++++-...+. |+.++
T Consensus 290 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~-I~~i~ 368 (430)
T 3tc9_A 290 NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC-IRILT 368 (430)
T ss_dssp TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE-EEEEC
T ss_pred CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE-EEEEC
Confidence 5688999887642 2 1222221 01122 45553 34665555555566 99998
Q ss_pred cCCCcEEEEEecC----C---C--------cccEEEEEeCCC-CCEEEEEeCCCcEEEEEee
Q 015650 288 TLDGTLLQEVRRG----A---D--------RAEIYSLAFSSN-AQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 288 ~~~~~~~~~~~~~----~---~--------~~~v~~l~~s~d-~~~l~s~~~dg~v~iwd~~ 333 (403)
.+++.....-.+ . . -.....|+++|+ +.++++-.....|+.++++
T Consensus 369 -~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 369 -PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp -TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred -CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 567554333210 0 0 125789999995 5555555567788888764
No 284
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.46 E-value=2e-05 Score=77.42 Aligned_cols=241 Identities=11% Similarity=0.026 Sum_probs=127.7
Q ss_pred CeEEEEEc-CCCCEEEEEcCC------cEEEEEcCCC-eeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceE
Q 015650 87 TLLHISFN-QDHGCFAAGTDH------GFRIYNCDPF-REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (403)
Q Consensus 87 ~i~~i~~s-~d~~~l~~~~~~------~i~iw~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (403)
.+...+|| |||++||.+.+. .|++++++++ +.+ ...+. .....+.|++|+..|+....+.......|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l-~~~~~----~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI-ADKVS----GTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC-CCCEE----EECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC-Ccccc----CceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 67889999 999999876521 2899999887 521 11111 11335778888643332222200001368
Q ss_pred EEEECCCCce--eEEEe--cCCceeEEEEecCceEEE--e----cCeEEEEEcCCce-ee--eEee-ccCCCceeEEEee
Q 015650 159 MIWDDHQSRC--IGELS--FRSEVRSVKLRRDRIIVV--L----EQKIFVYNFADLK-LL--HQIE-TIANPKGLCAVSQ 224 (403)
Q Consensus 159 ~iwd~~~~~~--~~~~~--~~~~i~~~~~~~~~~~~~--~----d~~i~i~d~~~~~-~~--~~~~-~~~~~~~~~~~~~ 224 (403)
+++++.+++. ...+. .......+.|+||+++++ . ...|+++|+.++. .. ..+. ........+.+ .
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~-~ 328 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM-H 328 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE-E
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee-e
Confidence 8889877642 23333 233456789999999887 2 3469999998752 12 3332 22222222222 2
Q ss_pred CCCeEEEEeeCC--ccCeEEEEEccC-CceeE-EeecCC--ceEEEEEcCCCCEE-EEEeCCCc-EEEEEEc-------C
Q 015650 225 GVGSLVLVCPGL--QKGQVRVEHYAS-KRTKF-IMAHDS--RIACFALTQDGQLL-ATSSTKGT-LVRIFNT-------L 289 (403)
Q Consensus 225 ~~~~~~~~~~g~--~d~~i~v~d~~~-~~~~~-~~~~~~--~i~~~~~sp~g~~l-~s~~~dg~-~i~iwd~-------~ 289 (403)
.++.+++.+.-. ....|..+++.+ +.... +..+.. .+..+.+. +..| ++...++. .|+++|+ .
T Consensus 329 ~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl~~~~~~~~ 406 (751)
T 2xe4_A 329 GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMADSQDGVFK 406 (751)
T ss_dssp TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEECCTTTSCCC
T ss_pred eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEeccccccccc
Confidence 377776665221 234677777765 33333 444443 34555554 4444 55556664 1566675 3
Q ss_pred CCcEEEEEecCCCcccEEEEEe----CCCCC-EEEEEeCC---CcEEEEEeecCC
Q 015650 290 DGTLLQEVRRGADRAEIYSLAF----SSNAQ-WLAVSSDK---GTVHVFNLKVNS 336 (403)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~l~~----s~d~~-~l~s~~~d---g~v~iwd~~~~~ 336 (403)
+++.+..+... ....+..+.+ ++++. ++++.+.. ..++.+|+.+++
T Consensus 407 ~g~~~~~l~l~-~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 407 AGTGLREVVME-EPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp TTTCCEECCCC-CSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred CCccceEECCC-CceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 44413344321 1123444433 44665 33443322 356666666554
No 285
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.46 E-value=0.0007 Score=61.04 Aligned_cols=206 Identities=8% Similarity=-0.033 Sum_probs=124.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEc-C-CcEEEEEcCCCe--eEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceE
Q 015650 84 PPPTLLHISFNQDHGCFAAGT-D-HGFRIYNCDPFR--EIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKV 158 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~-~-~~i~iw~~~~~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i 158 (403)
....+..|+|++.+..|.... . +.|+.++++... ......+. ........+++.. .+.++++.... +.|
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-~~~~~p~glavD~~~~~lY~~d~~~-----~~I 183 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVL-----GTV 183 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-SSCSCEEEEEEETTTTEEEEEETTT-----TEE
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-CCCCCcccEEEEecCCceEEEECCC-----CeE
Confidence 456788999998766665554 3 348888876421 00111121 2233455666654 33344444334 789
Q ss_pred EEEECCCCceeEEEe-cCCceeEEEEecC-ceEEEec----CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEE
Q 015650 159 MIWDDHQSRCIGELS-FRSEVRSVKLRRD-RIIVVLE----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (403)
Q Consensus 159 ~iwd~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (403)
.+.++........+. .-.....|++.|. +.++.+| +.|...++........+......-..+++++++..+|++
T Consensus 184 ~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 184 SVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp EEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEE
Confidence 999977555444444 3456789999985 4444443 578888876433322233333445779999988888877
Q ss_pred eeCCccCeEEEEEccCCceeEEee---cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEec
Q 015650 233 CPGLQKGQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (403)
Q Consensus 233 ~~g~~d~~i~v~d~~~~~~~~~~~---~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (403)
- ...+.|..+|++......+.. .-.....+++. .+.++++-...+. |..+|..+|+.+..+..
T Consensus 264 D--~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~-V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 264 D--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGSDVNLLAE 329 (400)
T ss_dssp E--TTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS-EEEEESSSCCCCEEEEC
T ss_pred E--CCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe-EEEEEcCCCCceEEEec
Confidence 5 346789999998865555432 22345677773 3445555556677 99999878877766663
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.45 E-value=0.00079 Score=64.33 Aligned_cols=228 Identities=7% Similarity=-0.055 Sum_probs=143.5
Q ss_pred CEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEEEECCCCceeEEEe-cC
Q 015650 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FR 175 (403)
Q Consensus 98 ~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~ 175 (403)
.+|+.+..+.|+..++++........+. .-.....++|++ ++..+.+.... +.|+.+++........+. ..
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~~--~~~~~~~l~~d~~~~~lywtD~~~-----~~I~r~~~~g~~~~~v~~~g~ 79 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNNNVAIPLT--GVKEASALDFDVTDNRIYWTDISL-----KTISRAFMNGSALEHVVEFGL 79 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTCEEECCCC--SCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSSC
T ss_pred cEEEEEeCCcEEEEECCCCCcceEEEcC--CCCceEEEEEECCCCEEEEEECCC-----CeEEEEECCCCCcEEEEeCCC
Confidence 4666666777999999865543222222 334677888886 34445554445 889999876554433343 23
Q ss_pred CceeEEEEecC-ceEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce
Q 015650 176 SEVRSVKLRRD-RIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (403)
Q Consensus 176 ~~i~~~~~~~~-~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~ 251 (403)
.....+++.+. +.+.+. .+.|.+.++........+......-..+++.|....+|++-.| ..+.|...+++....
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSER 158 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCC-CCCEEEEEeCCCCce
Confidence 45778888865 333333 5689999986433222222333344788999877777665433 357888888888766
Q ss_pred eEEeecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEE
Q 015650 252 KFIMAHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVF 330 (403)
Q Consensus 252 ~~~~~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iw 330 (403)
..+...-.....|+++++++.|+.+.. .+. |..+|+..... ..+.. ......+|++.. +.++++-...+.|...
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~-I~~~d~dG~~~-~v~~~--~l~~P~glav~~-~~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNL-IESSNMLGLNR-EVIAD--DLPHPFGLTQYQ-DYIYWTDWSRRSIERA 233 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSC-EEEEE--CCSCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCCCE-EEEEcCCCCce-EEeec--cCCCceEEEEEC-CEEEEecCCCCEEEEE
Confidence 665555567889999998777776655 445 99999865443 33332 223456777754 3444454467888888
Q ss_pred EeecCCCC
Q 015650 331 NLKVNSGS 338 (403)
Q Consensus 331 d~~~~~~~ 338 (403)
|..+++..
T Consensus 234 dk~tg~~~ 241 (628)
T 4a0p_A 234 NKTSGQNR 241 (628)
T ss_dssp ETTTCCSC
T ss_pred ECCCCCce
Confidence 87666543
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.40 E-value=0.00045 Score=62.92 Aligned_cols=148 Identities=11% Similarity=0.055 Sum_probs=90.3
Q ss_pred EEEEeeeC-CeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCce-EEEecC-------eEEEEEcC
Q 015650 132 VVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRI-IVVLEQ-------KIFVYNFA 202 (403)
Q Consensus 132 v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~d~-------~i~i~d~~ 202 (403)
...+++++ +...|...... +.|+.+|+..++.............+++++++. +++.|. .+..++.
T Consensus 139 P~~lavdp~~~g~Lyv~d~~-----~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQ-----HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBT-----EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCEEEECCCCCCeEEEEeCC-----CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-
Confidence 35667775 22233333332 678889987766544444556688999999987 444432 3444553
Q ss_pred Cceee--eEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEee--cCCceEEEEEcCCCCEEEEEeC
Q 015650 203 DLKLL--HQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA--HDSRIACFALTQDGQLLATSST 278 (403)
Q Consensus 203 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~--~~~~i~~~~~sp~g~~l~s~~~ 278 (403)
.+... ..+.. ......++++++...++++- ..++.|..++...+....+.. .......|+|+|+|++|+.+..
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d--~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNS--WNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEE--TTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEE--CCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 33222 23322 23346678888655666554 356789999988766533322 2235688999999996665554
Q ss_pred -CCcEEEEEEcC
Q 015650 279 -KGTLVRIFNTL 289 (403)
Q Consensus 279 -dg~~i~iwd~~ 289 (403)
.+. |..++..
T Consensus 290 ~~~~-I~~~~~d 300 (430)
T 3tc9_A 290 NQHY-ILRSDYD 300 (430)
T ss_dssp TTTE-EEEEEEE
T ss_pred CCCE-EEEEeCC
Confidence 555 9988764
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.00054 Score=62.80 Aligned_cols=246 Identities=6% Similarity=-0.004 Sum_probs=139.4
Q ss_pred CeEEEEEcC-CCCEEEEEc-C-CcEEEEEcCCCeeEEEEecccCcceeEEEEee-------eCCeE-EEeeCCCCCC-CC
Q 015650 87 TLLHISFNQ-DHGCFAAGT-D-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLF-------RCNIL-ALVGGGPDPQ-YP 154 (403)
Q Consensus 87 ~i~~i~~s~-d~~~l~~~~-~-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~-~~~s~~~d~~-~~ 154 (403)
....|+|.| ++..|.++. . +.|++.|.+.+..................++| ++++. ++++...+.. ..
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 567899998 354444444 3 33888887765544322221112335788888 87765 3333332100 00
Q ss_pred CceEEEEECCC-Ccee-----EEEecCCceeEEEEecC-ceEEE---ecCeEEEEEcC-------Ccee-----------
Q 015650 155 LNKVMIWDDHQ-SRCI-----GELSFRSEVRSVKLRRD-RIIVV---LEQKIFVYNFA-------DLKL----------- 206 (403)
Q Consensus 155 ~~~i~iwd~~~-~~~~-----~~~~~~~~i~~~~~~~~-~~~~~---~d~~i~i~d~~-------~~~~----------- 206 (403)
...|.+++... +... ..+..-.....++++|+ +.+++ .++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 02366665333 2221 22321234457888994 55444 36789999987 4543
Q ss_pred eeE-eec-cCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccC--Cce---eEEeec---C------------CceE-E
Q 015650 207 LHQ-IET-IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRT---KFIMAH---D------------SRIA-C 263 (403)
Q Consensus 207 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~--~~~---~~~~~~---~------------~~i~-~ 263 (403)
... +.. ....-..++++++++.+|++- .....|+.++... +.+ ..+-+. . .... .
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD--~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGV--INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEE--TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEe--CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 112 221 123346899999998777775 3567888877654 222 223221 0 1233 4
Q ss_pred EEEc-------CCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCC----------------------cccEEEEEeCCC
Q 015650 264 FALT-------QDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGAD----------------------RAEIYSLAFSSN 314 (403)
Q Consensus 264 ~~~s-------p~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~----------------------~~~v~~l~~s~d 314 (403)
+... ++|.++++-..+.. |+.++ .+|.. .++-+... -.....|+++++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~r-Ir~i~-~~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFC-VRKVT-PEGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTE-EEEEC-TTCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEccccccccCCCeEEEEECCCCE-EEEEe-CCCCE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 4554 45666666556666 99998 56744 44433100 124678999997
Q ss_pred -CCEEEEEeCCCcEEEEEeecCCC
Q 015650 315 -AQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 315 -~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
|.++++=.....|+.++++....
T Consensus 455 ~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp TTEEEEEETTTTEEEEEEECCCC-
T ss_pred CCEEEEEeCCCCEEEEEECCCCcc
Confidence 66666656778899999987664
No 289
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.26 E-value=0.00021 Score=69.08 Aligned_cols=231 Identities=9% Similarity=0.001 Sum_probs=120.9
Q ss_pred eEEEEEcCCCCEEEEEcC-C-cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC-CCCCCCCceEEEEECC
Q 015650 88 LLHISFNQDHGCFAAGTD-H-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG-PDPQYPLNKVMIWDDH 164 (403)
Q Consensus 88 i~~i~~s~d~~~l~~~~~-~-~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~~~~~~i~iwd~~ 164 (403)
..++++..+|+++++|+. . .+.+||..+.+-.....+. ....-......+++.+++.++ .+.......+.+||..
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~--~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQ--VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCS--SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCC--ccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 345678899999999983 3 4999998876544323332 111112333343444444444 3311122579999988
Q ss_pred CCceeEE-------Eec---------CCceeEEEEecCceEEE--ecCeEEEEEcCCceeeeEeeccCC---------Cc
Q 015650 165 QSRCIGE-------LSF---------RSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIAN---------PK 217 (403)
Q Consensus 165 ~~~~~~~-------~~~---------~~~i~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~---------~~ 217 (403)
+++.... +.. ...+..+.. .++..+. ....+..||..+............ ..
T Consensus 323 t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg-~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~ 401 (656)
T 1k3i_A 323 SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGW-KKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG 401 (656)
T ss_dssp TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEEC-GGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTC
T ss_pred CCcceeCCCccccccccccccceeecCCceEEEEC-CCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCC
Confidence 7653322 000 011111111 1222222 235688899887654333221111 11
Q ss_pred eeEEEeeCCCeEEEEeeCCcc-------C---eEEEEEccCCceeEEe---ecCC-ceEEEEEcCCCCEEEEEeCC----
Q 015650 218 GLCAVSQGVGSLVLVCPGLQK-------G---QVRVEHYASKRTKFIM---AHDS-RIACFALTQDGQLLATSSTK---- 279 (403)
Q Consensus 218 ~~~~~~~~~~~~~~~~~g~~d-------~---~i~v~d~~~~~~~~~~---~~~~-~i~~~~~sp~g~~l~s~~~d---- 279 (403)
..+.+...+..+ +++.|... . .|.+||..+..-..+. .... .-.++...|+|++++.|+.+
T Consensus 402 ~av~~~~~~~~i-~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~ 480 (656)
T 1k3i_A 402 NAVMYDAVKGKI-LTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIP 480 (656)
T ss_dssp EEEEEETTTTEE-EEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCT
T ss_pred ceEeccCCCCeE-EEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcC
Confidence 233333334444 44444211 1 6778887776554442 1222 23455677899999999864
Q ss_pred -------CcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeC
Q 015650 280 -------GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSD 323 (403)
Q Consensus 280 -------g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~ 323 (403)
.. +.+||..+.+-...-.............+.+||++++.|+.
T Consensus 481 ~~~~~~~~~-v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 481 FEDSTPVFT-PEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TCCCSBCCC-CEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cCCCCcccc-eEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 45 89999877654321111111122234556799999999984
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.26 E-value=0.002 Score=63.12 Aligned_cols=175 Identities=8% Similarity=-0.041 Sum_probs=115.2
Q ss_pred ceEEEEECCCCceeEEEecCCceeEEEEecC-ceEEEe---cCeEEEEEcCCc----eeeeEeeccCCCceeEEEeeCCC
Q 015650 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRD-RIIVVL---EQKIFVYNFADL----KLLHQIETIANPKGLCAVSQGVG 227 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~---d~~i~i~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 227 (403)
..|+..++...+....+.....+..|+|.+. +.++++ .+.|+.+++... .....+.........+++.+.++
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~ 483 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 483 (791)
T ss_dssp SSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred cceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCC
Confidence 5678888776655554555567789999984 444443 578999998652 22233332334456799999888
Q ss_pred eEEEEeeCCccCeEEEEEccCCceeEEee-cCCceEEEEEcCCCCEEEEEeC-C-CcEEEEEEcCCCcEEEEEecCCCcc
Q 015650 228 SLVLVCPGLQKGQVRVEHYASKRTKFIMA-HDSRIACFALTQDGQLLATSST-K-GTLVRIFNTLDGTLLQEVRRGADRA 304 (403)
Q Consensus 228 ~~~~~~~g~~d~~i~v~d~~~~~~~~~~~-~~~~i~~~~~sp~g~~l~s~~~-d-g~~i~iwd~~~~~~~~~~~~~~~~~ 304 (403)
.+|++- ...+.|.+.++.......+.. .......|+++|.+.+|+.... . +. |.+.++..... ..+... .-.
T Consensus 484 ~LY~tD--~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~-I~~~~~dG~~~-~~lv~~-~l~ 558 (791)
T 3m0c_C 484 NIYWTD--SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLNGVDI-YSLVTE-NIQ 558 (791)
T ss_dssp EEEEEE--TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCCE-EEEECS-SCS
T ss_pred cEEEEe--cCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCe-EEEEecCCCce-EEEEeC-CCC
Confidence 888765 356899999999876655543 4456889999998666665543 3 56 89998854443 344321 235
Q ss_pred cEEEEEeCCCCCEEEEEe-CCCcEEEEEeecC
Q 015650 305 EIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVN 335 (403)
Q Consensus 305 ~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~ 335 (403)
....|++++.+..|+.+. ..+.|..++++..
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 788999998777776664 4567888777543
No 291
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.23 E-value=6.7e-05 Score=73.67 Aligned_cols=198 Identities=8% Similarity=0.022 Sum_probs=111.4
Q ss_pred eEEEEeee-CCeEEEeeCCCCCCCCCceEEEEECCCC-ceeEE-EecCCceeEEEEecCceEEE---ec-----CeEEEE
Q 015650 131 GVVEMLFR-CNILALVGGGPDPQYPLNKVMIWDDHQS-RCIGE-LSFRSEVRSVKLRRDRIIVV---LE-----QKIFVY 199 (403)
Q Consensus 131 ~v~~~~~~-~~~~~~~s~~~d~~~~~~~i~iwd~~~~-~~~~~-~~~~~~i~~~~~~~~~~~~~---~d-----~~i~i~ 199 (403)
.+....|+ ||+..++-...........|+++|+.++ +.+.. +. .....+.|+||++.++ .+ ..|+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 67888999 9987655221110000146999999998 63321 21 2245789999987665 23 368889
Q ss_pred EcCCcee--eeEeec-cCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCC--ce--eEEe-ecCCceEEEEEcCCCC
Q 015650 200 NFADLKL--LHQIET-IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK--RT--KFIM-AHDSRIACFALTQDGQ 271 (403)
Q Consensus 200 d~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~--~~--~~~~-~~~~~i~~~~~sp~g~ 271 (403)
++.+++. ...+.. .......+.++++++.+++.........|.++|+.++ .. ..+. .......++.|+. |.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~ 331 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TS 331 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TT
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CC
Confidence 9877642 222222 1223456789999998777664434567888998874 33 3333 2344555565544 55
Q ss_pred EEEE-EeCC----CcEEEEEEcCCCcEEEE-EecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEee
Q 015650 272 LLAT-SSTK----GTLVRIFNTLDGTLLQE-VRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 272 ~l~s-~~~d----g~~i~iwd~~~~~~~~~-~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~ 333 (403)
.|+. ...+ .. |..+|+.++..... +..+.....+..+.+. .+.++++...++..+||-++
T Consensus 332 ~l~~~t~~~~a~~~~-L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 332 HLVILTNEGGAVNHK-LLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp EEEEEECTTTCTTCE-EEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEE
T ss_pred EEEEEeCCCCCCCcE-EEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEe
Confidence 5544 4333 24 77778765222122 2221122245666665 23455566677865555443
No 292
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.22 E-value=0.0012 Score=60.24 Aligned_cols=191 Identities=14% Similarity=0.033 Sum_probs=111.4
Q ss_pred EEEEeeeCC---eEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEEecC-------eEEEEEc
Q 015650 132 VVEMLFRCN---ILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLEQ-------KIFVYNF 201 (403)
Q Consensus 132 v~~~~~~~~---~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~-------~i~i~d~ 201 (403)
...++++++ +.++++... +.|+.++..+++.............+++++++.+++.|. .+..++.
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~------~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR------DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT------SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECG
T ss_pred CceEEEccccCCCEEEEEeCC------CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEEC
Confidence 446677763 444444321 578888887776554444455688999999998666542 2444443
Q ss_pred CCcee-eeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce-eEEee--cCCceEEEEEcCCCCEEEEEe
Q 015650 202 ADLKL-LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMA--HDSRIACFALTQDGQLLATSS 277 (403)
Q Consensus 202 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~-~~~~~--~~~~i~~~~~sp~g~~l~s~~ 277 (403)
..+.. ...+. .......+++.++...+|++. ..++.|+.+|..++.. ..+.. ....-..++|+|+|++|+.+.
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d--~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTR--YHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECB--TTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCeEEEEE--CCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 22211 01222 123335578888555565553 3567899999886555 33322 122335799999999666555
Q ss_pred C-CCcEEEEEEcC--CCcE--EEEEecC-C------------CcccEEEEEe---------CCCCCEEEEEeCCCcEEEE
Q 015650 278 T-KGTLVRIFNTL--DGTL--LQEVRRG-A------------DRAEIYSLAF---------SSNAQWLAVSSDKGTVHVF 330 (403)
Q Consensus 278 ~-dg~~i~iwd~~--~~~~--~~~~~~~-~------------~~~~v~~l~~---------s~d~~~l~s~~~dg~v~iw 330 (403)
. .+. |+.++.. +++. ...+.+. . .-.....+++ .++|.++++-...+.|+.+
T Consensus 292 ~~~~~-I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~ 370 (433)
T 4hw6_A 292 NGKHC-IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL 370 (433)
T ss_dssp TTTTE-EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred CCCCE-EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence 4 455 9998865 2321 1222221 0 0123677899 7777777666677788888
Q ss_pred Ee
Q 015650 331 NL 332 (403)
Q Consensus 331 d~ 332 (403)
+.
T Consensus 371 ~~ 372 (433)
T 4hw6_A 371 TP 372 (433)
T ss_dssp CT
T ss_pred CC
Confidence 63
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.20 E-value=0.0015 Score=56.79 Aligned_cols=197 Identities=9% Similarity=-0.001 Sum_probs=117.8
Q ss_pred CeEEEEEcCCCCEEEEEc-C-CcEEEEEcCCCee---EEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEE
Q 015650 87 TLLHISFNQDHGCFAAGT-D-HGFRIYNCDPFRE---IFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMI 160 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~-~-~~i~iw~~~~~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~i 160 (403)
.+.+++|.+.+..|.... . +.|..++.+.... .....+ .....+++.. .+.++++.... +.|.+
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l-----~~p~glavd~~~g~ly~~d~~~-----~~I~~ 105 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL-----LSPDGLACDWLGEKLYWTDSET-----NRIEV 105 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC-----SCCCEEEEETTTTEEEEEETTT-----TEEEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC-----CCccEEEEEcCCCeEEEEECCC-----CEEEE
Confidence 467889998665555554 3 3488888765421 111111 2233455553 33344443333 78999
Q ss_pred EECCCCceeEEEe-cCCceeEEEEecC-ceEEEec----CeEEEEEcCCceeeeEe-eccCCCceeEEEeeCCCeEEEEe
Q 015650 161 WDDHQSRCIGELS-FRSEVRSVKLRRD-RIIVVLE----QKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLVLVC 233 (403)
Q Consensus 161 wd~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~~d----~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (403)
+++........+. .......+++.|. +.+..+| +.|..+++. |.....+ ......-..+++++++..+|++-
T Consensus 106 ~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 106 SNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred EECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECCCCCccEEEEeccCCEEEEEE
Confidence 9976543332232 3456789999986 4444443 578888875 3333333 22223346799999888888775
Q ss_pred eCCccCeEEEEEccCCceeEEee-cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 234 PGLQKGQVRVEHYASKRTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 234 ~g~~d~~i~v~d~~~~~~~~~~~-~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
...+.|..+|++......+.. .......+++.. +.++++-...+. |..+|..+++.+..+.
T Consensus 185 --~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~-V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 185 --AKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHS-ILACNKYTGEGLREIH 246 (318)
T ss_dssp --TTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCEEEE
T ss_pred --CCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCe-EEEEECCCCCceEEEe
Confidence 356899999998755544432 344567777753 344455445566 8999987787666655
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.16 E-value=6.9e-06 Score=79.70 Aligned_cols=231 Identities=10% Similarity=-0.065 Sum_probs=127.5
Q ss_pred EEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEEEECCC----CceeEEEe
Q 015650 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQ----SRCIGELS 173 (403)
Q Consensus 99 ~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~~----~~~~~~~~ 173 (403)
+|+....+.|++.++++.... ..+. ....+..++|.+ .+.++++.... +.|+.+++.. ......+.
T Consensus 379 ~ll~~~~~~I~~id~~~~~~~--~~~~--~~~~p~gla~d~~~~~Ly~sD~~~-----~~I~~~~~~g~~~~~~~~~~i~ 449 (699)
T 1n7d_A 379 YLFFTNRHEVRKMTLDRSEYT--SLIP--NLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVIS 449 (699)
T ss_dssp CBCCCCTTC-CEECTTSCCEE--CCSC--CCTTCCCCEEETTTTEEEECCTTT-----TSBEEEESCCCCC-CCCCCBCC
T ss_pred eEEecCccceEEEeCCCCcce--eeec--cCcceEEEccccccCeEEEEecCC-----CeEEEEecCCCCCCcceEEEEe
Confidence 344444556888887665432 2222 223455677775 34444444444 7899998875 22222222
Q ss_pred -cCCceeEEEEec-CceEEE---ecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccC
Q 015650 174 -FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS 248 (403)
Q Consensus 174 -~~~~i~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~ 248 (403)
.......|++.+ .+.+++ ..+.|.++++........+.........+++.|.+..+|++-.+ ..+.|.++++..
T Consensus 450 ~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~-~~~~I~~~~~dG 528 (699)
T 1n7d_A 450 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNG 528 (699)
T ss_dssp SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS-SSCCEEBCCSSS
T ss_pred CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC-CCCeEEEEeCCC
Confidence 123455678874 344444 35789999986543333333223344678888877777665422 237788888776
Q ss_pred CceeEEe-ecCCceEEEEEcCCCCEEEEEe-CCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCc
Q 015650 249 KRTKFIM-AHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGT 326 (403)
Q Consensus 249 ~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~ 326 (403)
.....+. ..-.....|+|+|++..|+.+. ..+. |.++|+........+...........|++..+ .++++....+.
T Consensus 529 ~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~ 606 (699)
T 1n7d_A 529 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA 606 (699)
T ss_dssp CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE-EEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC
T ss_pred CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe-EEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe
Confidence 5444432 2234567899999766555544 4556 99999864333222221111123345555443 34445556788
Q ss_pred EEEEEeecCCCCCCC
Q 015650 327 VHVFNLKVNSGSARS 341 (403)
Q Consensus 327 v~iwd~~~~~~~~~~ 341 (403)
|..++..+++....+
T Consensus 607 V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 607 IFSANRLTGSDVNLL 621 (699)
T ss_dssp EEEEETTTEEEEECC
T ss_pred EEEEEccCCCceEEe
Confidence 999987766644333
No 295
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.09 E-value=0.0023 Score=61.03 Aligned_cols=230 Identities=10% Similarity=-0.018 Sum_probs=131.3
Q ss_pred CCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEEEECCCCce-eEEEe-
Q 015650 97 HGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRC-IGELS- 173 (403)
Q Consensus 97 ~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~~~~~-~~~~~- 173 (403)
..+|.-+..+.|+..+++.......... ........+.|++ ++..+.+.... +.|..+++..... ...+.
T Consensus 9 ~~~~~~~~~~~I~~i~~~~~~~~~~~~~--~~~~~~~~ld~~~~~~~ly~sD~~~-----~~I~r~~~~g~~~~~~v~~~ 81 (619)
T 3s94_A 9 APLLLYANRRDLRLVDATNGKENATIVV--GGLEDAAAVDFVFSHGLIYWSDVSE-----EAIKRTEFNKTESVQNVVVS 81 (619)
T ss_dssp -CCEEEECSSBEEEECCC---------C--BCCSCEEEEEEETTTTEEEEEETTT-----TEEEEEEC-----CEEEECS
T ss_pred CceEEEeccccEEEEeCCCCcceEEEEE--cCCCceEEEEEEeCCCEEEEEECCC-----CeEEEEEccCCCceEEEEeC
Confidence 3456666677799988875431211222 2344567888876 34444444444 7888888765532 22233
Q ss_pred cCCceeEEEEecC-ceEEEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCC
Q 015650 174 FRSEVRSVKLRRD-RIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK 249 (403)
Q Consensus 174 ~~~~i~~~~~~~~-~~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~ 249 (403)
.-.....+++.+. +.+.+. .+.|.+.++........+......-..+++.|....+|++-.| ..+.|...+++..
T Consensus 82 ~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g-~~~~I~r~~~dG~ 160 (619)
T 3s94_A 82 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGS 160 (619)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECS-SSCEEEEEETTSC
T ss_pred CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccC-CCCEEEEEECCCC
Confidence 2357889999984 444443 5789999986533222222333445678999987777766433 3567888888875
Q ss_pred ceeEEe-ecCCceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcE
Q 015650 250 RTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTV 327 (403)
Q Consensus 250 ~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v 327 (403)
....+. ..-.....|++++++..|+.+.. .+. |..+|+..... +.+... ......+|++..+ ..+++-...+.|
T Consensus 161 ~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~-I~~~~~dG~~~-~~~~~~-~~~~P~gi~~~~~-~ly~td~~~~~V 236 (619)
T 3s94_A 161 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDGTNR-QAVVKG-SLPHPFALTLFED-ILYWTDWSTHSI 236 (619)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCC-EEEESSSCCEE-C----------CCCEEESSS-EEEEECTTTCSE
T ss_pred ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCe-EEEecCCCCcc-EEEEeC-CCCCceEEEEeCC-EEEEecCCCCEE
Confidence 554443 33456789999997766665544 456 99998854333 223211 1122346777655 334444467788
Q ss_pred EEEEeecCCCC
Q 015650 328 HVFNLKVNSGS 338 (403)
Q Consensus 328 ~iwd~~~~~~~ 338 (403)
...|..+++..
T Consensus 237 ~~~d~~tg~~~ 247 (619)
T 3s94_A 237 LACNKYTGEGL 247 (619)
T ss_dssp EEEESSSCCCC
T ss_pred EEEECCCCccc
Confidence 88888777643
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.01 E-value=0.012 Score=56.25 Aligned_cols=174 Identities=10% Similarity=-0.050 Sum_probs=116.1
Q ss_pred ceEEEEECCCCceeEEEe--cCCceeEEEEecCceE-EEe---cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeE
Q 015650 156 NKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRII-VVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~--~~~~i~~~~~~~~~~~-~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (403)
+.|+..++.+......+. .-..+..++|.+.... ..+ ++.|+.+++........+.........+++.+.++.+
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~L 94 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNL 94 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEE
Confidence 689999998765443333 3346789999985443 333 6789999986543333333333345678999888888
Q ss_pred EEEeeCCccCeEEEEEccCCceeEEe-ecCCceEEEEEcCCCCEEEEEeC--CCcEEEEEEcCCCcEEEEEecCCCcccE
Q 015650 230 VLVCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSST--KGTLVRIFNTLDGTLLQEVRRGADRAEI 306 (403)
Q Consensus 230 ~~~~~g~~d~~i~v~d~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~s~~~--dg~~i~iwd~~~~~~~~~~~~~~~~~~v 306 (403)
|++- ...+.|.+.+++......+. ..-.....|+++|...+|+.... .+. |...++........+. .-...
T Consensus 95 Y~tD--~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~-I~r~~~dG~~~~~l~~---~~~~P 168 (628)
T 4a0p_A 95 YWAD--TGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPK-IDRAAMDGSERTTLVP---NVGRA 168 (628)
T ss_dssp EEEE--TTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCSCEEEEC---SCSSE
T ss_pred EEEE--CCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCE-EEEEeCCCCceEEEEC---CCCCc
Confidence 7764 35688999999886655443 34455789999996556655542 456 8888875444333332 33568
Q ss_pred EEEEeCCCCCEEEEEe-CCCcEEEEEeecC
Q 015650 307 YSLAFSSNAQWLAVSS-DKGTVHVFNLKVN 335 (403)
Q Consensus 307 ~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~ 335 (403)
..|+++++++.|..+. ..+.|..++++..
T Consensus 169 ~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 8999999877776664 5677888888654
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.00 E-value=8.7e-05 Score=72.03 Aligned_cols=201 Identities=9% Similarity=-0.051 Sum_probs=116.9
Q ss_pred CCeEEEEEcCCCCEEEEEc--CCcEEEEEcCC----CeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceE
Q 015650 86 PTLLHISFNQDHGCFAAGT--DHGFRIYNCDP----FREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKV 158 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~--~~~i~iw~~~~----~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i 158 (403)
..+..|+|.+.+..|.... .+.|+.++++. .... ..+. ........+++.. .+.++++.... +.|
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~--~~i~-~~~~~P~glavD~~~g~LY~tD~~~-----~~I 477 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVIS-RDIQAPDGLAVDWIHSNIYWTDSVL-----GTV 477 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCC--CBCC-SCC--CCCEECCCSSSBCEECCTTT-----SCE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceE--EEEe-CCCCCcceEEEEeeCCcEEEEeccC-----CeE
Confidence 4567889998777776665 34488888764 1111 1111 1111223445542 23333343333 789
Q ss_pred EEEECCCCceeEEEe-cCCceeEEEEecCc-eEEEec----CeEEEEEcCCceeeeEe-eccCCCceeEEEeeCCCeEEE
Q 015650 159 MIWDDHQSRCIGELS-FRSEVRSVKLRRDR-IIVVLE----QKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLVL 231 (403)
Q Consensus 159 ~iwd~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~~d----~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 231 (403)
.++++........+. .......+++.|.+ .++++| +.|..+++.. .....+ ......-..+++++++..+|+
T Consensus 478 ~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~~~~~l~~~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 478 SVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp EEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-CCCCEESCSSCSSCCCEEECTTTCCEEE
T ss_pred EEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-CCeeEEEeCCCCCccEEEEeccCCEEEE
Confidence 999976544333333 23456788999854 444433 6788887653 322222 222233467999999888887
Q ss_pred EeeCCccCeEEEEEccCCceeEEeec---CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEec
Q 015650 232 VCPGLQKGQVRVEHYASKRTKFIMAH---DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~~~~~~~~~---~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (403)
+- ...+.|.++++.......+... ......|++..+ .++++....+. |..+|..+++.+..+..
T Consensus 557 aD--~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~-V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 557 VD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA-IFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EE--TTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC-EEEEETTTEEEEECCCT
T ss_pred Ee--cCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe-EEEEEccCCCceEEeec
Confidence 75 3467899999987555444321 223445666543 34445555667 99999888888777653
No 298
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.83 E-value=0.014 Score=51.39 Aligned_cols=190 Identities=14% Similarity=0.097 Sum_probs=102.9
Q ss_pred eEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCce--eEEEe----cCCceeEEEEecC----ceEEE--ec-----
Q 015650 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC--IGELS----FRSEVRSVKLRRD----RIIVV--LE----- 193 (403)
Q Consensus 131 ~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~--~~~~~----~~~~i~~~~~~~~----~~~~~--~d----- 193 (403)
....++|.+++.++++.. . +.|++++ +++. +..+. .......|+++|+ +.+.+ ..
T Consensus 32 ~P~~ia~~pdG~l~V~e~-~-----g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAER-P-----GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp CEEEEEECTTSCEEEEET-T-----TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CceEEEEcCCCeEEEEeC-C-----CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 456888999988766643 3 8899988 4432 22221 2456889999998 44444 21
Q ss_pred -CeEEEEEcCCce-----e-eeEee---ccCCCceeEEEeeCCCeEEEEeeCC------------ccCeEEEEEccCC--
Q 015650 194 -QKIFVYNFADLK-----L-LHQIE---TIANPKGLCAVSQGVGSLVLVCPGL------------QKGQVRVEHYASK-- 249 (403)
Q Consensus 194 -~~i~i~d~~~~~-----~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~------------~d~~i~v~d~~~~-- 249 (403)
+.|..|+...+. . +..+. ...+....+++.+++ .+|++. |. ..+.|.-++.+..
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~-G~~~~~~~~~d~~~~~g~I~ri~~dG~~p 181 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTT-GEVYERELAQDLASLGGKILRLTPEGEPA 181 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEEC-CCTTCGGGGGCTTCSSSEEEEECTTSSBC
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEE-CCCCCCccccCCCCCceEEEEEcCCCCCC
Confidence 678888876431 1 11132 111233578999988 566554 31 1256666665541
Q ss_pred -----------ceeEE-eecCCceEEEEEcC-CCCEEEEEeCCCcEE------EEEEcCCCc------------------
Q 015650 250 -----------RTKFI-MAHDSRIACFALTQ-DGQLLATSSTKGTLV------RIFNTLDGT------------------ 292 (403)
Q Consensus 250 -----------~~~~~-~~~~~~i~~~~~sp-~g~~l~s~~~dg~~i------~iwd~~~~~------------------ 292 (403)
....+ .++ .....++|+| +|.++++-..... + .|.-+..+.
T Consensus 182 ~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~-~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~ 259 (352)
T 2ism_A 182 PGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSG-EQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRD 259 (352)
T ss_dssp TTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC-------CCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred CCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCC-CCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcC
Confidence 11122 233 2357789999 6665554332222 2 122222221
Q ss_pred EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 293 LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 293 ~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
++..+. +......++| .+|.++++.-..+.|...+++...
T Consensus 260 p~~~~~---~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~ 299 (352)
T 2ism_A 260 PLYFWP---QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGER 299 (352)
T ss_dssp CSEECT---TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEET
T ss_pred CeEecC---CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCC
Confidence 111121 1234567777 567666666566778777777554
No 299
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.81 E-value=0.011 Score=51.86 Aligned_cols=199 Identities=7% Similarity=0.058 Sum_probs=110.7
Q ss_pred EEEEEcCCCCEEEEE-------------cCCcEEEEEcCCCe-eEEEEeccc----CcceeEEEEeeeC--Ce--EEEee
Q 015650 89 LHISFNQDHGCFAAG-------------TDHGFRIYNCDPFR-EIFRRDFER----GGGIGVVEMLFRC--NI--LALVG 146 (403)
Q Consensus 89 ~~i~~s~d~~~l~~~-------------~~~~i~iw~~~~~~-~~~~~~~~~----~~~~~v~~~~~~~--~~--~~~~s 146 (403)
-.|++.|+|..++++ .++.|.++|.++.. ......+.+ ........+.+.. ++ ..++.
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 345677888766665 23449999986321 111122221 1223455555533 22 23333
Q ss_pred -CCC-CCCCCCceEEEEECCCC-ce---eEEEec--CCceeEEEEecCceEEEe------c--------------CeEEE
Q 015650 147 -GGP-DPQYPLNKVMIWDDHQS-RC---IGELSF--RSEVRSVKLRRDRIIVVL------E--------------QKIFV 198 (403)
Q Consensus 147 -~~~-d~~~~~~~i~iwd~~~~-~~---~~~~~~--~~~i~~~~~~~~~~~~~~------d--------------~~i~i 198 (403)
... + ..|.+|++..+ .. +..+.+ -...+++.+.++|.+.+. | +.|+.
T Consensus 133 nh~~~~-----s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 133 NHPGSS-----STVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp ECSTTC-----CEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred ECCCCC-----CeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 321 3 67888877654 22 223332 345789999999987662 1 34555
Q ss_pred EEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccC-Cce---eEEeecCCceEEEEEcC-CCCEE
Q 015650 199 YNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRT---KFIMAHDSRIACFALTQ-DGQLL 273 (403)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~-~~~---~~~~~~~~~i~~~~~sp-~g~~l 273 (403)
+|. ++ +..+...-..-..++++|+++.+|++- +..+.|..|++.. +.+ +.+ ...+....+++++ +|++.
T Consensus 208 ~d~--~~-~~~~~~~l~~pNGia~spDg~~lYvad--t~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lw 281 (355)
T 3sre_A 208 YSP--ND-VRVVAEGFDFANGINISPDGKYVYIAE--LLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLW 281 (355)
T ss_dssp ECT--TC-CEEEEEEESSEEEEEECTTSSEEEEEE--GGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEE
T ss_pred EEC--Ce-EEEeecCCcccCcceECCCCCEEEEEe--CCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEE
Confidence 554 33 222222233447799999999888875 3468899999864 222 223 3356678899999 59887
Q ss_pred EEEeCCCcEEEEEEcC--CCcEEEEEe
Q 015650 274 ATSSTKGTLVRIFNTL--DGTLLQEVR 298 (403)
Q Consensus 274 ~s~~~dg~~i~iwd~~--~~~~~~~~~ 298 (403)
+++..++..|..|+-. .+..+..+.
T Consensus 282 va~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 282 VGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred EEecCCceEEEEECCCCCCCCEEEEEE
Confidence 7666554214444433 244444444
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.77 E-value=0.016 Score=50.28 Aligned_cols=178 Identities=13% Similarity=0.185 Sum_probs=105.4
Q ss_pred CCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCe--------EEEeeCCC--CCCCCCceEEEEECC--CCceeEEE
Q 015650 105 DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNI--------LALVGGGP--DPQYPLNKVMIWDDH--QSRCIGEL 172 (403)
Q Consensus 105 ~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~s~~~--d~~~~~~~i~iwd~~--~~~~~~~~ 172 (403)
.+++.+||+ .++.+ ..+. . ..+..+...++. +.+++... + ++|.+|++. +++ +..+
T Consensus 49 ~~gL~Vydl-~G~~l--~~~~-~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~-----n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 49 KSGLVVYSL-DGKML--HSYN-T--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGK-----NTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp TTEEEEEET-TSCEE--EEEC-C--SCEEEEEEEEEEEETTEEEEEEEEEECSTTC-----CEEEEEEECTTTCC-EEEC
T ss_pred CCCEEEEcC-CCcEE--EEcc-C--CCcccEEEecccccCCceEeEEEEeCCCCCC-----CeEEEEEECCCCCc-eeec
Confidence 556999999 44544 3343 1 223333333322 34556555 5 799999773 333 4444
Q ss_pred e-------cC-CceeEEEE--ecC-ce-EEE---ecCeEEEEEcC-------CceeeeEeeccCCCceeEEEeeCCCeEE
Q 015650 173 S-------FR-SEVRSVKL--RRD-RI-IVV---LEQKIFVYNFA-------DLKLLHQIETIANPKGLCAVSQGVGSLV 230 (403)
Q Consensus 173 ~-------~~-~~i~~~~~--~~~-~~-~~~---~d~~i~i~d~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (403)
. .. ..+..+++ ++. +. +++ -++.+..|++. +.+.+++|... ..+..|.+.+....+|
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLY 195 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEE
Confidence 2 11 55677887 663 43 333 37888888883 34667777653 4567788887777776
Q ss_pred EEeeCCccCeEEEEEccC-----CceeEEee--c-CCceEEEEE--cCCCC-EEEEEe-CCCcEEEEEEcC-CCcEEEEE
Q 015650 231 LVCPGLQKGQVRVEHYAS-----KRTKFIMA--H-DSRIACFAL--TQDGQ-LLATSS-TKGTLVRIFNTL-DGTLLQEV 297 (403)
Q Consensus 231 ~~~~g~~d~~i~v~d~~~-----~~~~~~~~--~-~~~i~~~~~--sp~g~-~l~s~~-~dg~~i~iwd~~-~~~~~~~~ 297 (403)
++- ++.-|..++.+- ..+....+ + ...+..|++ .++++ ||++++ .+.. +.|||.. +.+.+..|
T Consensus 196 v~e---Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s-~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 196 IAE---EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS-YAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEE---TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE-EEEEESSTTCCEEEEE
T ss_pred Eec---ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE-EEEEECCCCCcEEEEE
Confidence 653 555555555432 11221211 1 236788888 45666 676666 4556 9999996 67888888
Q ss_pred ec
Q 015650 298 RR 299 (403)
Q Consensus 298 ~~ 299 (403)
..
T Consensus 272 ~I 273 (355)
T 3amr_A 272 RI 273 (355)
T ss_dssp EE
T ss_pred Ee
Confidence 63
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.75 E-value=0.017 Score=50.24 Aligned_cols=234 Identities=12% Similarity=0.098 Sum_probs=121.0
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecc-cCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEEC
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~ 163 (403)
...+.+|.|.+++..+++|..+.| +...+.++.-....+. ......+..+.+.++..+++ + .. +.|.. ..
T Consensus 35 ~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~-g-~~-----g~i~~-S~ 105 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIV-G-EP-----PIMLH-TT 105 (327)
T ss_dssp SSCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEE-E-ET-----TEEEE-ES
T ss_pred CCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEE-E-CC-----CeEEE-EC
Confidence 347999999888888887765544 3333333221111121 01245678888887554443 3 22 54443 22
Q ss_pred CCCceeEEEe----cCCceeEEEEecCceEEE-e-cCeEEEEEcCCceeeeEe-eccCCCceeEEEeeCCCeEEEEeeCC
Q 015650 164 HQSRCIGELS----FRSEVRSVKLRRDRIIVV-L-EQKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLVLVCPGL 236 (403)
Q Consensus 164 ~~~~~~~~~~----~~~~i~~~~~~~~~~~~~-~-d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~ 236 (403)
..|+.-..+. +...+..+.+.+++.+++ . ++.|+. ....|+.-..+ ......+..+.+.+++. +++. +
T Consensus 106 DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~--~~~~-g- 180 (327)
T 2xbg_A 106 DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGE--YVAV-S- 180 (327)
T ss_dssp STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSC--EEEE-E-
T ss_pred CCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCc--EEEE-E-
Confidence 3344333322 234577788777776655 3 444432 11223322222 12233455666666543 3343 2
Q ss_pred ccCeEEE-EEccCCceeEE-eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecC--CCcccEEEEEeC
Q 015650 237 QKGQVRV-EHYASKRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG--ADRAEIYSLAFS 312 (403)
Q Consensus 237 ~d~~i~v-~d~~~~~~~~~-~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~--~~~~~v~~l~~s 312 (403)
..+.+.. .|-....-..+ ......+..+.+.+++++++ ++.+|. +++.+...++.-..+... .....+.++.+.
T Consensus 181 ~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~-~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 181 SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGK-IAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTE-EEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEE-EeCCce-EEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 3344433 33212222222 23456788999999987664 456777 777643224433333221 122358899999
Q ss_pred CCCCEEEEEeCCCcEEEEEeecCC
Q 015650 313 SNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 313 ~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
+++.+++++. +|.| ++..+.++
T Consensus 259 ~~~~~~~~g~-~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 259 TPNEVWLAGG-AGAL-LCSQDGGQ 280 (327)
T ss_dssp SSSCEEEEES-TTCE-EEESSTTS
T ss_pred CCCEEEEEeC-CCeE-EEeCCCCc
Confidence 8887777654 6666 33344443
No 302
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.74 E-value=0.041 Score=54.02 Aligned_cols=230 Identities=13% Similarity=0.150 Sum_probs=131.4
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECC
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~ 164 (403)
...|++|.-..+|.+- .|+.+|+..||-...+.. ..........|.++....++...++.. .-+..||..
T Consensus 21 ~n~V~~I~qD~~G~lW-igT~~GL~ryDG~~~~~~--~~~~~~~~~~i~~i~~d~~g~lWigT~-------~Gl~~yd~~ 90 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIW-IGSNKGLFSYDGYSTQQH--FTYGENNNTRIYCGVIIDNTYLYMGTD-------NGILVYNYR 90 (758)
T ss_dssp CCCEEEEEECTTSCEE-EEESSCEEEECSSCEEEC--SCTTSTTSSCEEEEEEETTTEEEEEET-------TEEEEEETT
T ss_pred cceEEEEEECCCCCEE-EEECCCccccCCCceEEE--EccCCCCCceEEEEEEcCCCcEEEEeC-------CCeEEEeCC
Confidence 5679999888887654 455778888873221111 111111234677877777765555443 347899987
Q ss_pred CCceeEEEe-cCCceeEEEEecCceEEEecCeEEEEEcCCceeeeEeec-----cCCCceeEEEeeCCCeEEEEeeCCcc
Q 015650 165 QSRCIGELS-FRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIET-----IANPKGLCAVSQGVGSLVLVCPGLQK 238 (403)
Q Consensus 165 ~~~~~~~~~-~~~~i~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~d 238 (403)
+.+...... ....|.++.......++++.+.+..||..+++.. .+.. ....+..+....+ ..+++++ .
T Consensus 91 ~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~-g~lWigt---~- 164 (758)
T 3ott_A 91 ADRYEQPETDFPTDVRTMALQGDTLWLGALNGLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKD-NQIYVGT---Y- 164 (758)
T ss_dssp TTEECCCSCCCCSCEEEEEEETTEEEEEETTEEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTT-CCEEEEE---T-
T ss_pred CCEEECcccCCCceEEEEEecCCcEEEEcCCcceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCC-CCEEEEe---C-
Confidence 764322111 2335666665433344456778999998765432 2311 1122333333332 3445543 2
Q ss_pred CeEEEEEccCCceeEEeec------CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeC
Q 015650 239 GQVRVEHYASKRTKFIMAH------DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFS 312 (403)
Q Consensus 239 ~~i~v~d~~~~~~~~~~~~------~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 312 (403)
+-+..++..++....+... ...|.++....++..|..|+. +. |..+|..+++... +... ....|.++...
T Consensus 165 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G-l~~~~~~~~~~~~-~~~l-~~~~i~~i~~d 240 (758)
T 3ott_A 165 NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY-LFQYFPSTGQIKQ-TEAF-HNNSIKSLALD 240 (758)
T ss_dssp TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE-EEEEETTTTEEEE-EEEE-EEEEEEEEEEC
T ss_pred CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CC-CeEEcCCCCeEEe-ccCC-CCCeEEEEEEc
Confidence 3477788776655443211 224888888877776666664 45 8999987765432 2211 23468899988
Q ss_pred CCCCEEEEEeCCCcEEEEEeecCC
Q 015650 313 SNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 313 ~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
.+|.+.+.. .+ -|.+++..+.+
T Consensus 241 ~~g~lWigT-~~-Gl~~~~~~~~~ 262 (758)
T 3ott_A 241 GNGDLLAGT-DN-GLYVYHNDTTP 262 (758)
T ss_dssp TTCCEEEEE-TT-EEEEECCTTSC
T ss_pred CCCCEEEEe-CC-ceeEEecCCCc
Confidence 888776544 44 47777766543
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.71 E-value=0.022 Score=50.18 Aligned_cols=228 Identities=11% Similarity=0.053 Sum_probs=119.6
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecc--cCcceeEEEEeeeCC-----eEEEeeCCCCCCCCCce
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE--RGGGIGVVEMLFRCN-----ILALVGGGPDPQYPLNK 157 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~-----~~~~~s~~~d~~~~~~~ 157 (403)
-.....|+|.|||+++++-..+.|++++ .++......+. .........++++++ .++++...... -..+.
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~-~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG-GLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT-SSEEE
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC-CCccE
Confidence 4457899999999977776666688887 33322222221 123456788999997 34443332100 00045
Q ss_pred EEEEECCCCce-----e-EEEec-C---CceeEEEEecCceEEEec----------------CeEEEEEcCCc-------
Q 015650 158 VMIWDDHQSRC-----I-GELSF-R---SEVRSVKLRRDRIIVVLE----------------QKIFVYNFADL------- 204 (403)
Q Consensus 158 i~iwd~~~~~~-----~-~~~~~-~---~~i~~~~~~~~~~~~~~d----------------~~i~i~d~~~~------- 204 (403)
|..|+...+.. + ..+.. . .....++|.|||.+.+++ +.|..++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 77777664321 1 11221 1 234689999999877743 35666664320
Q ss_pred -----eeeeEee-ccCCCceeEEEeeCCCeEEEEeeCCccC-------eEEEEEccC-----------------CceeEE
Q 015650 205 -----KLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKG-------QVRVEHYAS-----------------KRTKFI 254 (403)
Q Consensus 205 -----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~d~-------~i~v~d~~~-----------------~~~~~~ 254 (403)
.....+. ++. ....++++++...++++-.| .+. .|.+..... .....+
T Consensus 187 ~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g-~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 187 LGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHG-PSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEEC-C------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred cCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcC-CCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 1111111 121 12457788855566666544 222 233322111 011111
Q ss_pred eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcE------EEEEecCCCcccEEEEEeCCCCCEEEEEe
Q 015650 255 MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL------LQEVRRGADRAEIYSLAFSSNAQWLAVSS 322 (403)
Q Consensus 255 ~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~------~~~~~~~~~~~~v~~l~~s~d~~~l~s~~ 322 (403)
.+......++| .+|.++++.-..+. |...++..... ...+.. ....+..+++.|||.++++..
T Consensus 265 -~~~~ap~G~~~-~~G~l~v~~~~~~~-v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 -PQGFPPGNLAF-FRGDLYVAGLRGQA-LLRLVLEGERGRWRVLRVETALS--GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp -TTCCCEEEEEE-ETTEEEEEETTTTE-EEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEECTTSCEEEEEC
T ss_pred -CCCCCCcceEE-ECCEEEEEECCCCE-EEEEEECCCCcceeecchheecc--cCCCeeEEEECCCCcEEEEEe
Confidence 22234567777 46766655555555 77777654321 122222 225789999999998766654
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.69 E-value=0.04 Score=52.57 Aligned_cols=224 Identities=7% Similarity=-0.021 Sum_probs=130.4
Q ss_pred EEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEEEECCCCceeEEEe-cCC
Q 015650 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRS 176 (403)
Q Consensus 99 ~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~-~~~ 176 (403)
+|+.+....|+..+++...... ..+....-....++.|.+ ++..+++.... +.|+.+++........+. .-.
T Consensus 319 ~Ll~~~~~~i~~i~l~~~~~~~-~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~-----~~I~r~~~~g~~~~~v~~~~~~ 392 (619)
T 3s94_A 319 LLLLARRTDLRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEGYIYWTDDEV-----RAIRRSFIDGSGSQFVVTAQIA 392 (619)
T ss_dssp EEEEEESSCEEEEESSSTTCCC-EECCCSCCSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSSCS
T ss_pred EEEEEcccceEEEecCCCccce-eEEeccccCccEEEEEEcCCCeEEEEeCCC-----CeEEEEEcCCCccEEEEECCCC
Confidence 5666666667777776543211 111112334577888886 44444444444 789999876544333333 235
Q ss_pred ceeEEEEec-CceEEEe---cCeEEEEEcCCceeeeEe-eccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCce
Q 015650 177 EVRSVKLRR-DRIIVVL---EQKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (403)
Q Consensus 177 ~i~~~~~~~-~~~~~~~---d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~ 251 (403)
....+++.. .+.+..+ .+.|.+.++... ....+ ......-..+++.|....+|++-.| ....|...+++....
T Consensus 393 ~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~-~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g-~~~~I~r~~~dG~~~ 470 (619)
T 3s94_A 393 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT-MRKILISEDLEEPRAIVLDPMVGYMYWTDWG-EIPKIERAALDGSDR 470 (619)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECTTCCSEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSC
T ss_pred CcCceEEecccCcEEEEeCCCCcEEEEeCCCC-eEEEEEECCCCCeeeEEEEcCCCcEEEecCC-CCCEEEEEccCCCcc
Confidence 677899986 4444443 568999998644 33333 2233445778999887777766434 346788888877554
Q ss_pred eEEe-ecCCceEEEEEcCCCCEEEEEeCC-CcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEE-eCCCcEE
Q 015650 252 KFIM-AHDSRIACFALTQDGQLLATSSTK-GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS-SDKGTVH 328 (403)
Q Consensus 252 ~~~~-~~~~~i~~~~~sp~g~~l~s~~~d-g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~-~~dg~v~ 328 (403)
..+. ..-.....|++++++..|+.+... +. |..+++..... +.+... ......+|+...+ +|+.+ ...+.|.
T Consensus 471 ~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~-I~~~~~dG~~~-~~~~~~-~l~~P~glav~~~--~ly~tD~~~~~I~ 545 (619)
T 3s94_A 471 VVLVNTSLGWPNGLALDYDEGKIYWGDAKTDK-IEVMNTDGTGR-RVLVED-KIPHIFGFTLLGD--YVYWTDWQRRSIE 545 (619)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEESSSCCC-EEEEEC-CCCSSCCEEEETT--EEEEECTTSSCEE
T ss_pred EEEEeCCCCCCeeeEEcccCCEEEEEECCCCE-EEEEecCCCce-EEEecc-CCCCcEEEEEECC--EEEEeecCCCeEE
Confidence 4443 334567899999977777766554 55 88998754332 333211 1122335555433 44444 3556677
Q ss_pred EEEeecC
Q 015650 329 VFNLKVN 335 (403)
Q Consensus 329 iwd~~~~ 335 (403)
..|..++
T Consensus 546 ~~~k~~g 552 (619)
T 3s94_A 546 RVHKRSA 552 (619)
T ss_dssp EEESSSC
T ss_pred EEEcCCC
Confidence 7776666
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.69 E-value=0.02 Score=49.08 Aligned_cols=230 Identities=11% Similarity=0.084 Sum_probs=112.0
Q ss_pred CCCEEEEEc-C------CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc-
Q 015650 96 DHGCFAAGT-D------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR- 167 (403)
Q Consensus 96 d~~~l~~~~-~------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~- 167 (403)
++.+++.|+ . +.+.+||..+.+-.....+. ..... .++....+.++++++... ......+.+||..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~~~~~l~v~GG~~~-~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSIT-RKRRY-VASVSLHDRIYVIGGYDG-RSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCS-SCCBS-CEEEEETTEEEEECCBCS-SCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCC-hhhcc-ccEEEECCEEEEEcCCCC-CccCceEEEEECCCCCC
Confidence 455666665 2 23888888776544323332 11111 122223445555544321 1112579999988776
Q ss_pred --eeEEEe--cCCceeEEEEecCceEEEe--------cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeC
Q 015650 168 --CIGELS--FRSEVRSVKLRRDRIIVVL--------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (403)
Q Consensus 168 --~~~~~~--~~~~i~~~~~~~~~~~~~~--------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 235 (403)
-...-. ....-.+++.. ++.+++. ...+.+||+.+.+-...-..........+... ++.+++. .|
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~-GG 167 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SGVIYCL-GG 167 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TTEEEEE-CC
T ss_pred CeeEECCCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE-CCEEEEE-CC
Confidence 322211 11112223333 4444442 23689999887543322111111112222222 3444444 34
Q ss_pred Cc----cCeEEEEEccCCceeEEeecC---CceEEEEEcCCCCEEEEEeCC-----CcEEEEEEcCCCcEEEEEecCCCc
Q 015650 236 LQ----KGQVRVEHYASKRTKFIMAHD---SRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGTLLQEVRRGADR 303 (403)
Q Consensus 236 ~~----d~~i~v~d~~~~~~~~~~~~~---~~i~~~~~sp~g~~l~s~~~d-----g~~i~iwd~~~~~~~~~~~~~~~~ 303 (403)
.. ...+.+||+.+..-..+.... .....+.+ ++++++.|+.+ .. +.+||+.+.+-...-......
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~W~~~~~~p~~r 244 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSS-VEAYNIRTDSWTTVTSMTTPR 244 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEEECCCSSCC
T ss_pred CCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccce-EEEEeCCCCcEEECCCCCCcc
Confidence 22 256889998886655543211 11222333 67777777764 35 899999877654322111111
Q ss_pred ccEEEEEeCCCCCEEEEEeCCC-----cEEEEEeecCC
Q 015650 304 AEIYSLAFSSNAQWLAVSSDKG-----TVHVFNLKVNS 336 (403)
Q Consensus 304 ~~v~~l~~s~d~~~l~s~~~dg-----~v~iwd~~~~~ 336 (403)
.....+.+ ++++++.|+.++ .|.+||+++.+
T Consensus 245 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 245 CYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp BSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred cceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 11222333 677777777553 46667766543
No 306
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.67 E-value=0.017 Score=49.60 Aligned_cols=149 Identities=5% Similarity=0.046 Sum_probs=95.9
Q ss_pred EEeeeC-CeEEEeeCCCCCCCCCceEEEEECCCCceeEE-Eec-------CCceeEEEE---ecCceEEE-e--------
Q 015650 134 EMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGE-LSF-------RSEVRSVKL---RRDRIIVV-L-------- 192 (403)
Q Consensus 134 ~~~~~~-~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~-~~~-------~~~i~~~~~---~~~~~~~~-~-------- 192 (403)
+..|.. ++.++++.-.. +.|..|+...+..... +.. ...+..+.| .+++++++ .
T Consensus 17 ~~~wd~~~g~~~vs~l~~-----g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYK-----GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CEEEETTTTEEEEEETTT-----TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred CccCcCCCCEEEEEeccC-----CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 456655 56667776566 8999999876544333 212 113578999 58887776 3
Q ss_pred -------cCeEEEEEcC---CceeeeEeecc--C-----------CCceeEEEeeCCCeEEEEeeCCcc-CeEEEEEccC
Q 015650 193 -------EQKIFVYNFA---DLKLLHQIETI--A-----------NPKGLCAVSQGVGSLVLVCPGLQK-GQVRVEHYAS 248 (403)
Q Consensus 193 -------d~~i~i~d~~---~~~~~~~~~~~--~-----------~~~~~~~~~~~~~~~~~~~~g~~d-~~i~v~d~~~ 248 (403)
+..|..||+. +++.+...... . .....+++.++++-. +. ++.. +.|..++...
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaY-Vt--~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSY-VA--FALGMPAIARVSADG 168 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEE-EE--EEESSCEEEEECTTS
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEE-Ee--CCCCCCeEEEEeCCC
Confidence 3679999999 78776655311 1 124567777776632 22 2244 6666666666
Q ss_pred CceeEEeec------CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCC
Q 015650 249 KRTKFIMAH------DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (403)
Q Consensus 249 ~~~~~~~~~------~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~ 291 (403)
+....+... ....+.|+++|+|+.|++....+. |..+|+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~-L~~fD~~~p 216 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRA-LTAFDVSKP 216 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSS-EEEEECSSS
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCe-EEEEcCCCC
Confidence 544433211 223679999999999988877888 999998753
No 307
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.61 E-value=0.0052 Score=54.52 Aligned_cols=112 Identities=13% Similarity=0.130 Sum_probs=78.2
Q ss_pred eEEEeeCCCeEEEEeeCCccCeEEEEEccC-CceeEEeec----CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCc-
Q 015650 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAH----DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT- 292 (403)
Q Consensus 219 ~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~-~~~~~~~~~----~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~- 292 (403)
......++..++++ .++.||.-++.. ...+.+... -..|..+..+|+|++||..+.. . |.|-.+..+.
T Consensus 25 ~~~~~~n~t~i~~a----~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~-V~Vv~LP~~~~ 98 (452)
T 3pbp_A 25 YIFSSQNGTRIVFI----QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-E-IFVMEVPWGYS 98 (452)
T ss_dssp EEEEETTTTEEEEE----ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-E-EEEEECCTTCS
T ss_pred EEEEEcCCCEEEEE----ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-e-EEEEEecCccc
Confidence 34455666666665 457888888773 444444432 2368889999999999988765 4 8998887321
Q ss_pred -----------EEEEEecCC----CcccEEEEEeCCC---CCEEEEEeCCCcEEEEEeecCC
Q 015650 293 -----------LLQEVRRGA----DRAEIYSLAFSSN---AQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 293 -----------~~~~~~~~~----~~~~v~~l~~s~d---~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
..+.+..+. ...+|..+.|+|- +..|++-..|+.|++||+....
T Consensus 99 ~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~ 160 (452)
T 3pbp_A 99 NVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQ 160 (452)
T ss_dssp CCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTT
T ss_pred cCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCC
Confidence 123444321 2367999999995 4589999999999999999844
No 308
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.59 E-value=0.0064 Score=52.29 Aligned_cols=151 Identities=10% Similarity=0.070 Sum_probs=93.7
Q ss_pred eeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEe-ec-------CCceEEEEE---cCCCCEEEEEeC--------
Q 015650 218 GLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM-AH-------DSRIACFAL---TQDGQLLATSST-------- 278 (403)
Q Consensus 218 ~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~-~~-------~~~i~~~~~---sp~g~~l~s~~~-------- 278 (403)
..+.|......+++.. ...+.|..||...+....+. .. ...+..|.| .|+++++++...
T Consensus 16 E~~~wd~~~g~~~vs~--l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSN--LYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp SCEEEETTTTEEEEEE--TTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred cCccCcCCCCEEEEEe--ccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 4677777666655543 46799999998865443332 11 113579999 689888775431
Q ss_pred -----CCcEEEEEEcC---CCcEEEEEecCC-----------CcccEEEEEeCCCCCEEEEEeCC-CcEEEEEeecCCCC
Q 015650 279 -----KGTLVRIFNTL---DGTLLQEVRRGA-----------DRAEIYSLAFSSNAQWLAVSSDK-GTVHVFNLKVNSGS 338 (403)
Q Consensus 279 -----dg~~i~iwd~~---~~~~~~~~~~~~-----------~~~~v~~l~~s~d~~~l~s~~~d-g~v~iwd~~~~~~~ 338 (403)
+.. |..||+. +++.+....... .......|+..++|+..++++.. +. ||.++.....
T Consensus 94 ~~~~g~~~-v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~--I~rV~pdG~~ 170 (334)
T 2p9w_A 94 QSSHGASS-FHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA--IARVSADGKT 170 (334)
T ss_dssp CCSSSCCE-EEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE--EEEECTTSCC
T ss_pred cccCCCCE-EEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCe--EEEEeCCCCE
Confidence 566 9999998 787766554210 01258899999999998888876 66 4454443310
Q ss_pred CCCCCCCCCCCCCcccccccccccccceeeeeeeeEE-EEEeCCCceEEEeccCCCEEEEEccCC
Q 015650 339 ARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQ-FRLVEGSPYIVAFGHQKNTVVILGMDG 402 (403)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~fs~d~~~l~~~~~dG 402 (403)
. ..|.... .....--.+.++++|||+.|++...+|
T Consensus 171 ~-----------------------------~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g 206 (334)
T 2p9w_A 171 V-----------------------------STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPR 206 (334)
T ss_dssp E-----------------------------EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSS
T ss_pred E-----------------------------eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCC
Confidence 0 0110000 000011366899999999999886644
No 309
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.59 E-value=0.003 Score=64.38 Aligned_cols=219 Identities=11% Similarity=0.131 Sum_probs=133.6
Q ss_pred cEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecC
Q 015650 107 GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD 186 (403)
Q Consensus 107 ~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~ 186 (403)
.|.|.|+........+.+. .. +...+|....++--. . .++.|||+++.+.++.+....+|.-=.|-.+
T Consensus 49 ~vvIidl~~~~~~~rrpi~--Ad----sAIMnP~~~iiALra-g-----~~lQiFnl~~k~klks~~~~e~VvfWkWis~ 116 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPIS--AD----SAIMNPASKVIALKA-G-----KTLQIFNIEMKSKMKAHTMTDDVTFWKWISL 116 (1630)
T ss_pred eEEEEECCCCCCccccccc--ch----hhccCCCcceEEEec-C-----CeEEEeehHHhhhhcccccCCCceEEEecCC
Confidence 3888898776655433333 11 122333333333322 2 7999999999999998887777777777665
Q ss_pred ceE-EEecCeEEEEEcCC-ceeeeEeeccC--CCceeEEE--eeCCCeEEEEee----CCccCeEEEEEccCCceeEEee
Q 015650 187 RII-VVLEQKIFVYNFAD-LKLLHQIETIA--NPKGLCAV--SQGVGSLVLVCP----GLQKGQVRVEHYASKRTKFIMA 256 (403)
Q Consensus 187 ~~~-~~~d~~i~i~d~~~-~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~----g~~d~~i~v~d~~~~~~~~~~~ 256 (403)
..+ ++++..|+.|++.. ..+.+.+..|. ....++.+ +++.+.++++.- |.-.|.+.+|..+.+..+.+.+
T Consensus 117 ~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ieg 196 (1630)
T 1xi4_A 117 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (1630)
T ss_pred CeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhH
Confidence 554 45899999999964 23444443331 12334444 444444433321 2345889999999888888888
Q ss_pred cCCceEEEEEc--C-CCCEEEEEeC---CCcEEEEEEcCCC---cE------EEE-EecCCCcccEEEEEeCCCCCEEEE
Q 015650 257 HDSRIACFALT--Q-DGQLLATSST---KGTLVRIFNTLDG---TL------LQE-VRRGADRAEIYSLAFSSNAQWLAV 320 (403)
Q Consensus 257 ~~~~i~~~~~s--p-~g~~l~s~~~---dg~~i~iwd~~~~---~~------~~~-~~~~~~~~~v~~l~~s~d~~~l~s 320 (403)
|......+.+. + ...+++.+.. .+. ++|-++... .. +.. +.......-..++..++....+..
T Consensus 197 ha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k-Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~ 275 (1630)
T 1xi4_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (1630)
T ss_pred hHhhhheeccCCCCCCceEEEEEEecCCCce-EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEE
Confidence 87766555443 1 2234443332 245 888887432 11 000 111001123456778888888888
Q ss_pred EeCCCcEEEEEeecCCCC
Q 015650 321 SSDKGTVHVFNLKVNSGS 338 (403)
Q Consensus 321 ~~~dg~v~iwd~~~~~~~ 338 (403)
.+.-|.|++||+.++..+
T Consensus 276 itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 276 ITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred EecCceEEEEecccchhh
Confidence 899999999999999864
No 310
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.59 E-value=0.0025 Score=64.92 Aligned_cols=231 Identities=13% Similarity=0.154 Sum_probs=143.2
Q ss_pred EEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEee-eCCeEEEeeCCCCCCCCCceEEEEECCC-Ccee
Q 015650 92 SFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNKVMIWDDHQ-SRCI 169 (403)
Q Consensus 92 ~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~s~~~d~~~~~~~i~iwd~~~-~~~~ 169 (403)
-.+|..+.+|.-....+.||++++........+ ...|.-+.| +++.+.+++. ..|+-|++.. ..++
T Consensus 72 IMnP~~~iiALrag~~lQiFnl~~k~klks~~~----~e~VvfWkWis~~~l~lVT~--------~aVyHW~~~~~s~P~ 139 (1630)
T 1xi4_A 72 IMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM----TDDVTFWKWISLNTVALVTD--------NAVYHWSMEGESQPV 139 (1630)
T ss_pred ccCCCcceEEEecCCeEEEeehHHhhhhccccc----CCCceEEEecCCCeeEEEcC--------CeEEEeccCCCCccH
Confidence 357777777777666699999998877643333 356888888 5567777776 6899999964 3455
Q ss_pred EEEe-c----CCceeEEEEecCceEEE----------ecCeEEEEEcCCceeeeEeeccCCCceeEEEee--CCCeEE-E
Q 015650 170 GELS-F----RSEVRSVKLRRDRIIVV----------LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQ--GVGSLV-L 231 (403)
Q Consensus 170 ~~~~-~----~~~i~~~~~~~~~~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~ 231 (403)
+.+. | ...|..-..+++.++++ ..|.+.+|..+.+ .-+.+++|......+.+.- .+..++ +
T Consensus 140 k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred HHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEE
Confidence 5554 3 45677777888888777 1578899987653 3344555554433333321 111111 1
Q ss_pred EeeCCccCeEEEEEccCC-----ce-----eEEee---cCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 232 VCPGLQKGQVRVEHYASK-----RT-----KFIMA---HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 232 ~~~g~~d~~i~v~d~~~~-----~~-----~~~~~---~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
+.-....+.++|.++... .. ..... ...-..++..++.-..++.-+.-|. |.++|+.++.++..-+
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~-~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce-EEEEecccchhhhhcc
Confidence 111112368888887542 11 01111 1233456777887778888889999 9999999999886555
Q ss_pred cCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCC
Q 015650 299 RGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (403)
Q Consensus 299 ~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~ 338 (403)
. ....|...+-.....-++.....|.|.--.++..+-+
T Consensus 298 i--s~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 298 I--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred c--cCCceEEeccCCCCCceEEEcCCceEEEEEEccchhh
Confidence 3 2345554444444344445557887777777766643
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.50 E-value=0.038 Score=47.32 Aligned_cols=230 Identities=15% Similarity=0.164 Sum_probs=110.5
Q ss_pred CCEEEEEc-C----CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEE
Q 015650 97 HGCFAAGT-D----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGE 171 (403)
Q Consensus 97 ~~~l~~~~-~----~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~ 171 (403)
+.+++.|+ + +.+.+||..+.+-.....+. ..... .++....+.+++++|... ......+.+||..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELP-SRRCR-AGMVYMAGLVFAVGGFNG-SLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCS-SCCBS-CEEEEETTEEEEESCBCS-SSBCCCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCC-ccccc-ceEEEECCEEEEEeCcCC-CccccceEEECCCCCceeeC
Confidence 45556665 2 23888888776544333332 11111 122223445555544321 11125688999887653322
Q ss_pred Ee--cCCceeEEEEecCceEEE--ec-----CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCc-----
Q 015650 172 LS--FRSEVRSVKLRRDRIIVV--LE-----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ----- 237 (403)
Q Consensus 172 ~~--~~~~i~~~~~~~~~~~~~--~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----- 237 (403)
-. ....-.+++...+..+++ .+ ..+.+||+.+.+-...-..........+... ++.++++ .|..
T Consensus 93 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~-GG~~~~~~~ 170 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGLLYAV-GGYDVASRQ 170 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEE-CCEETTTTE
T ss_pred CCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCEEEEE-eCCCCCCCc
Confidence 22 111122333333333443 12 3688999887543222111111111122222 3444444 3421
Q ss_pred -cCeEEEEEccCCceeEEeec---CCceEEEEEcCCCCEEEEEeCCC-----cEEEEEEcCCCcEEEEEecCCCcccEEE
Q 015650 238 -KGQVRVEHYASKRTKFIMAH---DSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (403)
Q Consensus 238 -d~~i~v~d~~~~~~~~~~~~---~~~i~~~~~sp~g~~l~s~~~dg-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (403)
...+.+||+.+..-..+... ......+.+ ++++++.|+.++ . +.+||..+.+-...-...........
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKS-VEVYDPTTNAWRQVADMNMCRRNAGV 247 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCC-EEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccce-EEEEeCCCCCEeeCCCCCCccccCeE
Confidence 24588899887665544321 111222233 677778877643 5 89999987654332211101111122
Q ss_pred EEeCCCCCEEEEEeCCC-----cEEEEEeecCC
Q 015650 309 LAFSSNAQWLAVSSDKG-----TVHVFNLKVNS 336 (403)
Q Consensus 309 l~~s~d~~~l~s~~~dg-----~v~iwd~~~~~ 336 (403)
+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 248 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 248 CAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 222 677777777553 47888877654
No 312
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.49 E-value=0.0086 Score=54.90 Aligned_cols=154 Identities=10% Similarity=0.077 Sum_probs=93.1
Q ss_pred eeEEEEecC--ceEEE-e--cCeEEEEEcCCceeeeEeeccC---CCceeEEE-------eeCCCeEEEEeeCC----cc
Q 015650 178 VRSVKLRRD--RIIVV-L--EQKIFVYNFADLKLLHQIETIA---NPKGLCAV-------SQGVGSLVLVCPGL----QK 238 (403)
Q Consensus 178 i~~~~~~~~--~~~~~-~--d~~i~i~d~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~~~~~~~g~----~d 238 (403)
...|+|.|. +.+++ . .+.|++.|+.++.....+.... .....++| +++++.++++.... ..
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 568899983 44444 3 3579999988766554443321 23467888 88988777765321 11
Q ss_pred CeEEEEEccC-Cce------eEEeecCCceEEEEEcCC-CCEEEEEeCCCcEEEEEEcC-------CCcE----------
Q 015650 239 GQVRVEHYAS-KRT------KFIMAHDSRIACFALTQD-GQLLATSSTKGTLVRIFNTL-------DGTL---------- 293 (403)
Q Consensus 239 ~~i~v~d~~~-~~~------~~~~~~~~~i~~~~~sp~-g~~l~s~~~dg~~i~iwd~~-------~~~~---------- 293 (403)
..|.+++... +.. ..+.. ......++++|+ +.++++-..++. |..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~-V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQ-VFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTE-EEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred ceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCE-EEEEecccccccccCceeeccccccccc
Confidence 2366665333 122 22322 234567889995 555555556777 9999987 5543
Q ss_pred -EEE-EecCCCcccEEEEEeCCCCCEEEEE-eCCCcEEEEEeec
Q 015650 294 -LQE-VRRGADRAEIYSLAFSSNAQWLAVS-SDKGTVHVFNLKV 334 (403)
Q Consensus 294 -~~~-~~~~~~~~~v~~l~~s~d~~~l~s~-~~dg~v~iwd~~~ 334 (403)
... +... .......|+|+|+|++|..+ +....|+.++++.
T Consensus 299 ~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 299 TFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp TEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 222 2221 23456899999999965555 4667888877654
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.48 E-value=0.048 Score=48.03 Aligned_cols=232 Identities=9% Similarity=0.012 Sum_probs=122.7
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecc--cCcceeEEEEeeeCC----eEEEeeCCC--CCCCCCc
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE--RGGGIGVVEMLFRCN----ILALVGGGP--DPQYPLN 156 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~----~~~~~s~~~--d~~~~~~ 156 (403)
-.....|+|.|||+++++-..+.|++++. .++ .....+. .........++++++ +.+.++... ...-..+
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 45678999999999777766766888863 333 2212221 123356788999986 444443321 0000003
Q ss_pred eEEEEECCCC--c-----ee-EEEe--cCCceeEEEEecCceEEEec----------------CeEEEEEcCCce-----
Q 015650 157 KVMIWDDHQS--R-----CI-GELS--FRSEVRSVKLRRDRIIVVLE----------------QKIFVYNFADLK----- 205 (403)
Q Consensus 157 ~i~iwd~~~~--~-----~~-~~~~--~~~~i~~~~~~~~~~~~~~d----------------~~i~i~d~~~~~----- 205 (403)
.|..|+...+ . .+ ..+. .......+.|.|||.+.++. +.|..++.. ++
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCC
Confidence 5666665543 1 11 1122 11235679999999877742 356555543 32
Q ss_pred ---eeeEe-eccCCCceeEEEeeCCCeEEEEeeCCcc-CeEEEEEccC-----------------CceeEEeecCCceEE
Q 015650 206 ---LLHQI-ETIANPKGLCAVSQGVGSLVLVCPGLQK-GQVRVEHYAS-----------------KRTKFIMAHDSRIAC 263 (403)
Q Consensus 206 ---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~d-~~i~v~d~~~-----------------~~~~~~~~~~~~i~~ 263 (403)
....+ .++.+ ..-++|+++...++++-.+... ..|.+..... .....+.........
T Consensus 185 pf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 185 PFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp SSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 01112 12222 3568888855566665434211 1233322100 011111011235678
Q ss_pred EEEc-------CCCCEEEEEeCCCcEEEEEEcCCC-cEE--EEEecCCCcccEEEEEeCCCCCEEEEEe
Q 015650 264 FALT-------QDGQLLATSSTKGTLVRIFNTLDG-TLL--QEVRRGADRAEIYSLAFSSNAQWLAVSS 322 (403)
Q Consensus 264 ~~~s-------p~g~~l~s~~~dg~~i~iwd~~~~-~~~--~~~~~~~~~~~v~~l~~s~d~~~l~s~~ 322 (403)
++|. .+|+++++.-..+. |...++... +.. ..+... ....+..+++.|||.++++..
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~-v~~~~~~~~g~~~~~~~~~~~-~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSM-LAAVNFGDNMEVRKISTFFKN-VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTE-EEEEEECGGGCEEEEEEECTT-TSCCEEEEEECTTSCEEEEEC
T ss_pred eEEECCCCCcccCCcEEEEEcCCCE-EEEEEECCCCcccceeeeccC-CCCCeeEEEECCCCcEEEEEe
Confidence 8883 57777766555666 888888753 332 233211 135789999999998766654
No 314
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.48 E-value=0.044 Score=47.64 Aligned_cols=227 Identities=10% Similarity=0.009 Sum_probs=119.0
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecc-cCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEEC
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~ 163 (403)
...+.+|.|.+ +..+++|..+.|.. ..+.++ ....... ......+..+.+..++..++.+.. +.|.. ..
T Consensus 79 ~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG~-tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------g~v~~-S~ 148 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGGQ-SWSQIPLDPKLPGSPRLIKALGNGSAEMITNV------GAIYR-TK 148 (327)
T ss_dssp CCEEEEEEEET-TEEEEEEETTEEEE-ESSTTS-SCEECCCCTTCSSCEEEEEEEETTEEEEEETT------CCEEE-ES
T ss_pred CccEEEEEecC-CeEEEEECCCeEEE-ECCCCC-CceECccccCCCCCeEEEEEECCCCEEEEeCC------ccEEE-Ec
Confidence 34688999986 55666665543322 223222 2212111 012234566766655555555543 54432 22
Q ss_pred CCCceeEEEe--cCCceeEEEEecCceEEE--ecCeEEEE-Ec--CCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCC
Q 015650 164 HQSRCIGELS--FRSEVRSVKLRRDRIIVV--LEQKIFVY-NF--ADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (403)
Q Consensus 164 ~~~~~~~~~~--~~~~i~~~~~~~~~~~~~--~d~~i~i~-d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 236 (403)
..|+.-.... ....+..+.+.+++.+++ .++.++.- |- .+.+.+. ......+..+.+.+++. ++++.
T Consensus 149 DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~-~~~~~--- 222 (327)
T 2xbg_A 149 DSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGR-LWMIV--- 222 (327)
T ss_dssp STTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSC-EEEEE---
T ss_pred CCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCC-EEEEe---
Confidence 3344333333 455788999999888777 35555443 31 2222221 12234455666666653 34432
Q ss_pred ccCeEEEEEccCCce-eEEe----ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecC-CCcccEEEEE
Q 015650 237 QKGQVRVEHYASKRT-KFIM----AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG-ADRAEIYSLA 310 (403)
Q Consensus 237 ~d~~i~v~d~~~~~~-~~~~----~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~ 310 (403)
.+|.+++.+.+.+.. ..+. .+...+.++.+.+++.+++.+ .++. | ++....++.-..+... .....+.++.
T Consensus 223 ~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~-i-~~S~DgG~tW~~~~~~~~~~~~~~~v~ 299 (327)
T 2xbg_A 223 NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGA-L-LCSQDGGQTWQQDVDVKKVPSNFYKIL 299 (327)
T ss_dssp TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTC-E-EEESSTTSSCEECGGGTTSSSCCCEEE
T ss_pred CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCe-E-EEeCCCCcccEEcCccCCCCCCeEEEE
Confidence 467777664332221 1111 122358899999888876655 4676 6 4444555544444321 1235678888
Q ss_pred eCCCCCEEEEEeCCCcEEEEE
Q 015650 311 FSSNAQWLAVSSDKGTVHVFN 331 (403)
Q Consensus 311 ~s~d~~~l~s~~~dg~v~iwd 331 (403)
|.+++. +++++.+|.|.-++
T Consensus 300 ~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 300 FFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EEETTE-EEEECSTTEEEEEC
T ss_pred EECCCc-eEEEcCCceEEEEc
Confidence 875554 56667888766554
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.33 E-value=0.07 Score=46.74 Aligned_cols=136 Identities=11% Similarity=0.109 Sum_probs=79.3
Q ss_pred cCeEEEEEcCCc-eeeeEeecc-------CCCceeEEEee--CCCeEEEEe-eCCccCeEEEEEccC--CceeEEe---e
Q 015650 193 EQKIFVYNFADL-KLLHQIETI-------ANPKGLCAVSQ--GVGSLVLVC-PGLQKGQVRVEHYAS--KRTKFIM---A 256 (403)
Q Consensus 193 d~~i~i~d~~~~-~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~-~g~~d~~i~v~d~~~--~~~~~~~---~ 256 (403)
+|.|.++|+.+. .....+... .-...-+.+.. ++...++++ .+..+..|.+|+++. +....+. +
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g 161 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH 161 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc
Confidence 678999998742 112222211 11223455555 344333443 332367888888765 2222222 1
Q ss_pred c-CCceEEEEEcCCCCEEEEEeC-----------------CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEE
Q 015650 257 H-DSRIACFALTQDGQLLATSST-----------------KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWL 318 (403)
Q Consensus 257 ~-~~~i~~~~~sp~g~~l~s~~~-----------------dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l 318 (403)
. -...+.+.+.++|++.++... .|. |.-+|. ++...... .-..-+.|+|+||++.|
T Consensus 162 ~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~-vyr~d~--~~~~~~~~---~l~~pNGia~spDg~~l 235 (355)
T 3sre_A 162 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSF-VTYYSP--NDVRVVAE---GFDFANGINISPDGKYV 235 (355)
T ss_dssp TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEE-EEEECT--TCCEEEEE---EESSEEEEEECTTSSEE
T ss_pred CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccE-EEEEEC--CeEEEeec---CCcccCcceECCCCCEE
Confidence 1 235789999999998776541 234 555554 43332222 22467899999999988
Q ss_pred EEEe-CCCcEEEEEeec
Q 015650 319 AVSS-DKGTVHVFNLKV 334 (403)
Q Consensus 319 ~s~~-~dg~v~iwd~~~ 334 (403)
+.+. ..+.|+.|+++.
T Consensus 236 Yvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEGGGTEEEEEEECT
T ss_pred EEEeCCCCeEEEEEECC
Confidence 7665 678899999974
No 316
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.29 E-value=0.021 Score=50.67 Aligned_cols=136 Identities=16% Similarity=0.180 Sum_probs=90.7
Q ss_pred EEEecCeEEEEEcCCceeeeEeecc----CCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc-------------e
Q 015650 189 IVVLEQKIFVYNFADLKLLHQIETI----ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-------------T 251 (403)
Q Consensus 189 ~~~~d~~i~i~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-------------~ 251 (403)
+++.++.||.-++......+.++.. ...+..+.++|+|+.+.++ | +..|.|..+..+. .
T Consensus 36 ~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~--g--~~~V~Vv~LP~~~~~~~~~~~~~~~q~ 111 (452)
T 3pbp_A 36 VFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF--N--DNEIFVMEVPWGYSNVEDVSIQDAFQI 111 (452)
T ss_dssp EEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE--C--SSEEEEEECCTTCSCCCCHHHHHTTEE
T ss_pred EEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe--c--CCeEEEEEecCccccCcccccccccce
Confidence 3337889999888755555555543 2256778999998854443 3 5688888877311 1
Q ss_pred eEEee------cCCceEEEEEcC---CCCEEEEEeCCCcEEEEEEcCCC--cEEEEEec-------CCCcccEEEEEeCC
Q 015650 252 KFIMA------HDSRIACFALTQ---DGQLLATSSTKGTLVRIFNTLDG--TLLQEVRR-------GADRAEIYSLAFSS 313 (403)
Q Consensus 252 ~~~~~------~~~~i~~~~~sp---~g~~l~s~~~dg~~i~iwd~~~~--~~~~~~~~-------~~~~~~v~~l~~s~ 313 (403)
+.+.- ...+|..+.|+| .+..|++-..|+. |++||+... ++. .+.. ......|.+++|..
T Consensus 112 ~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~-Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~ 189 (452)
T 3pbp_A 112 FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT-ITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSK 189 (452)
T ss_dssp EEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC-EEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECT
T ss_pred eEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE-EEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcC
Confidence 12221 246799999999 4568999999999 999999752 222 2321 11225789999999
Q ss_pred CCCEEEEEe--CCCcEEEE
Q 015650 314 NAQWLAVSS--DKGTVHVF 330 (403)
Q Consensus 314 d~~~l~s~~--~dg~v~iw 330 (403)
++-.|...+ ..|.|+-.
T Consensus 190 ~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 190 DGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TSSCEEEEECTTSCEEEEE
T ss_pred CCcEEEEEecCCCCCEEEE
Confidence 887776655 77877654
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.28 E-value=0.071 Score=45.79 Aligned_cols=232 Identities=12% Similarity=0.061 Sum_probs=110.3
Q ss_pred CCCCEEEEEcC-----CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCC---CCCCCCceEEEEECCCC
Q 015650 95 QDHGCFAAGTD-----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP---DPQYPLNKVMIWDDHQS 166 (403)
Q Consensus 95 ~d~~~l~~~~~-----~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~---d~~~~~~~i~iwd~~~~ 166 (403)
-++.+++.|+. +.+.+||..+.+-.....+. ..... .++....+.+++++|.. +.......+.+||..+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQ-VPRSG-LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCS-SCCBS-CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCC-ccccc-ceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 35667777762 23888998776644332232 11111 12223345555555431 10001146888998776
Q ss_pred ceeEEEe--cCCceeEEEEecCceEEEe--------cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCC
Q 015650 167 RCIGELS--FRSEVRSVKLRRDRIIVVL--------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (403)
Q Consensus 167 ~~~~~~~--~~~~i~~~~~~~~~~~~~~--------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 236 (403)
+-...-. ....-.+++.. ++.+++. -..+.+||+.+.+-...-..........+... ++.+++. .|.
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~-GG~ 177 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAV-GGF 177 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEE-CCB
T ss_pred eEeECCCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEE-eCC
Confidence 5332211 11111223333 4444442 24688999887543221111111111122222 3454444 342
Q ss_pred c----cCeEEEEEccCCceeEEeec---CCceEEEEEcCCCCEEEEEeCC-----CcEEEEEEcCCCcEEEEEecCCCcc
Q 015650 237 Q----KGQVRVEHYASKRTKFIMAH---DSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGTLLQEVRRGADRA 304 (403)
Q Consensus 237 ~----d~~i~v~d~~~~~~~~~~~~---~~~i~~~~~sp~g~~l~s~~~d-----g~~i~iwd~~~~~~~~~~~~~~~~~ 304 (403)
. ...+.+||+.+..-..+... ......+.+ ++++++.|+.+ .. +.+||+.+.+-...-.......
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~~~~~p~~r~ 254 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNS-VERYDVETETWTFVAPMKHRRS 254 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEECCCCSSCCB
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccce-EEEEeCCCCcEEECCCCCCCcc
Confidence 2 24688899887654443221 111223333 67777777764 45 8999998765433211110111
Q ss_pred cEEEEEeCCCCCEEEEEeCC-----CcEEEEEeecCC
Q 015650 305 EIYSLAFSSNAQWLAVSSDK-----GTVHVFNLKVNS 336 (403)
Q Consensus 305 ~v~~l~~s~d~~~l~s~~~d-----g~v~iwd~~~~~ 336 (403)
....+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 255 ~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 255 ALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 1222222 66777777744 346677766543
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.25 E-value=0.076 Score=45.49 Aligned_cols=228 Identities=10% Similarity=0.053 Sum_probs=112.0
Q ss_pred CCEEEEEcC---CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEe
Q 015650 97 HGCFAAGTD---HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS 173 (403)
Q Consensus 97 ~~~l~~~~~---~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~ 173 (403)
+.+++.|+. +.+.+||..+.+-.....+. ..... .++....+.+++++|.. ......+.+||..+++-...-.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPF-EKRRD-AACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCS-CCCBS-CEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCC-cccce-eEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCC
Confidence 345566652 34899998876644333332 11111 12222344555555432 1122678999988875433322
Q ss_pred --cCCceeEEEEecCceEEE---ec------CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCc-----
Q 015650 174 --FRSEVRSVKLRRDRIIVV---LE------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ----- 237 (403)
Q Consensus 174 --~~~~i~~~~~~~~~~~~~---~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----- 237 (403)
....-..++.. ++.+++ .+ ..+.+||+.+.+-...-..........+... ++.++++ .|..
T Consensus 88 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~-GG~~~~~~~ 164 (306)
T 3ii7_A 88 PPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NGLIYVC-GGSLGNNVS 164 (306)
T ss_dssp CSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEE-CCEESCTTT
T ss_pred CCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CCEEEEE-CCCCCCCCc
Confidence 11111223333 444444 22 3589999887643222111111112222222 3444444 3321
Q ss_pred ---cCeEEEEEccCCceeEEeecCC---ceEEEEEcCCCCEEEEEeCC-----CcEEEEEEcCCCcEEEEEecCCCcccE
Q 015650 238 ---KGQVRVEHYASKRTKFIMAHDS---RIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGTLLQEVRRGADRAEI 306 (403)
Q Consensus 238 ---d~~i~v~d~~~~~~~~~~~~~~---~i~~~~~sp~g~~l~s~~~d-----g~~i~iwd~~~~~~~~~~~~~~~~~~v 306 (403)
...+.+||..+..-..+..... .-..+.+ ++++++.|+.+ .. +.+||..+.+-...-.........
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~p~~r~~~ 241 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDN-VEYYDIKLNEWKMVSPMPWKGVTV 241 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCC-EEEEETTTTEEEECCCCSCCBSCC
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCce-EEEeeCCCCcEEECCCCCCCccce
Confidence 3558899998876555432211 1122222 67777777653 34 899999876543221111111122
Q ss_pred EEEEeCCCCCEEEEEeCC-----CcEEEEEeecCC
Q 015650 307 YSLAFSSNAQWLAVSSDK-----GTVHVFNLKVNS 336 (403)
Q Consensus 307 ~~l~~s~d~~~l~s~~~d-----g~v~iwd~~~~~ 336 (403)
..+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 242 ~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 242 KCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred eEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 33333 67788888754 456777776654
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.08 E-value=0.13 Score=45.14 Aligned_cols=243 Identities=7% Similarity=-0.001 Sum_probs=123.1
Q ss_pred CCeEEEEEcCCCC-EEEEEcCCcEEEEEcCCCeeEEEEec---ccCcceeEEEEeeeCC----eEEEeeCCCCCCC--CC
Q 015650 86 PTLLHISFNQDHG-CFAAGTDHGFRIYNCDPFREIFRRDF---ERGGGIGVVEMLFRCN----ILALVGGGPDPQY--PL 155 (403)
Q Consensus 86 ~~i~~i~~s~d~~-~l~~~~~~~i~iw~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~----~~~~~s~~~d~~~--~~ 155 (403)
.....|+|.|+|+ ++++-..+.|++++.+.........+ ..........++++++ +.+.++....... ..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 4568999999999 77766565588887432111000111 1112345688999874 4444432210000 00
Q ss_pred ceEEEEECCCC--c--eeEE-Ee-cC------CceeEEEEecCceEEEe--c--------------CeEEEEEcCCce--
Q 015650 156 NKVMIWDDHQS--R--CIGE-LS-FR------SEVRSVKLRRDRIIVVL--E--------------QKIFVYNFADLK-- 205 (403)
Q Consensus 156 ~~i~iwd~~~~--~--~~~~-~~-~~------~~i~~~~~~~~~~~~~~--d--------------~~i~i~d~~~~~-- 205 (403)
..|..|++..+ + .... +. .. .....+.|.|||.+.++ | +.|.-++.. ++
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d-G~~p 176 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ-GEIP 176 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT-SCCC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCC-CCCC
Confidence 35666665432 1 1111 11 11 12467999999977774 2 357777754 22
Q ss_pred -----------eeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCC-------------------------
Q 015650 206 -----------LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK------------------------- 249 (403)
Q Consensus 206 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~------------------------- 249 (403)
....+.........++|.+....++++-.+ .++.=.|.-+..+
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g-~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~ 255 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHG-PRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGE 255 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEEC-SBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBS
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecC-CCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCC
Confidence 112221111223567788755566655433 2211122111110
Q ss_pred -------ceeEEeecCCceEEEEEcC-------CCCEEEEEeCCCcEEEEEEcCCCcEEEEEec-CCCcccEEEEEeCCC
Q 015650 250 -------RTKFIMAHDSRIACFALTQ-------DGQLLATSSTKGTLVRIFNTLDGTLLQEVRR-GADRAEIYSLAFSSN 314 (403)
Q Consensus 250 -------~~~~~~~~~~~i~~~~~sp-------~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d 314 (403)
....+ .+......+.|.. +|+++++.-..+. |...++..++....... ......+..|++.||
T Consensus 256 ~~~~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 333 (353)
T 2g8s_A 256 IVAGTEQPVFYW-KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKD-VIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD 333 (353)
T ss_dssp SCTTSCCCSEEE-SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTE-EEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred CCCCccCCeEEe-CCCcCcceeEEECCccCcccCCcEEEEEccCCE-EEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence 00111 2233567788864 4667666555666 88888776654433221 011247999999999
Q ss_pred CCEEEEEeCCCcEEEEEee
Q 015650 315 AQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 315 ~~~l~s~~~dg~v~iwd~~ 333 (403)
|.++++.. +..=+||.+.
T Consensus 334 G~lyv~td-~~~g~I~ri~ 351 (353)
T 2g8s_A 334 GYLYVLTD-ESSGELLKVS 351 (353)
T ss_dssp SCEEEEEC-STTEEEEEEE
T ss_pred CcEEEEEe-CCCCEEEEEe
Confidence 98666443 2233556553
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.06 E-value=0.14 Score=45.00 Aligned_cols=192 Identities=11% Similarity=0.060 Sum_probs=106.2
Q ss_pred eeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCc-eeEEEe----cCCceeEEEEecC----ceEEE--ec-----
Q 015650 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR-CIGELS----FRSEVRSVKLRRD----RIIVV--LE----- 193 (403)
Q Consensus 130 ~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~-~~~~~~----~~~~i~~~~~~~~----~~~~~--~d----- 193 (403)
.....++|.+++.++++.. + +.|++++ .+++ .+..+. .......|+++|+ +.+.+ ..
T Consensus 29 ~~P~~ia~~pdG~l~V~e~-~-----g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTER-P-----GRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp SCEEEEEEEETTEEEEEET-T-----TEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CCCeEEEEcCCCeEEEEeC-C-----CEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 4567888999988777654 3 7899887 4554 222211 2356889999997 55444 22
Q ss_pred ---CeEEEEEcCCc-------eee-eEeec-cCCCceeEEEeeCCCeEEEEeeCC------------ccCeEEEEEccCC
Q 015650 194 ---QKIFVYNFADL-------KLL-HQIET-IANPKGLCAVSQGVGSLVLVCPGL------------QKGQVRVEHYASK 249 (403)
Q Consensus 194 ---~~i~i~d~~~~-------~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~------------~d~~i~v~d~~~~ 249 (403)
+.|..|+.... +.+ ..+.. ..+....++|.+++. +|++. |. ..+.|..++.+..
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~-G~~~~~~~~~d~~~~~G~I~ri~~dG~ 179 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITT-GDAADPRLAQDLSSLAGKILRVDEEGR 179 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEEC-CCTTCGGGGTCTTCCSSEEEEECTTSC
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEE-CCCCCCccccCCCCCCeEEEEEcCCCC
Confidence 57888887643 111 11221 122345689999884 55553 32 1245666665543
Q ss_pred --------ceeE-EeecCCceEEEEEcC-CCCEEEEEeCCC--cEEEEEEcCCCc------------------EEEEEec
Q 015650 250 --------RTKF-IMAHDSRIACFALTQ-DGQLLATSSTKG--TLVRIFNTLDGT------------------LLQEVRR 299 (403)
Q Consensus 250 --------~~~~-~~~~~~~i~~~~~sp-~g~~l~s~~~dg--~~i~iwd~~~~~------------------~~~~~~~ 299 (403)
.... ..++. ....++|+| +|+++++-.... ..|.+.. .+. ++..+.
T Consensus 180 ~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~- 255 (354)
T 3a9g_A 180 PPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTG- 255 (354)
T ss_dssp CCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECT-
T ss_pred CCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecC-
Confidence 1122 22333 346899999 676555432221 1133322 221 112221
Q ss_pred CCCcccEEEEEeC-------CCCCEEEEEeCCCcEEEEEeecC
Q 015650 300 GADRAEIYSLAFS-------SNAQWLAVSSDKGTVHVFNLKVN 335 (403)
Q Consensus 300 ~~~~~~v~~l~~s-------~d~~~l~s~~~dg~v~iwd~~~~ 335 (403)
. .......++|. .+|.++++.-..+.|...+++..
T Consensus 256 ~-~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 256 S-ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp T-CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG
T ss_pred C-CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC
Confidence 1 12457788883 56777776667778888888754
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.88 E-value=0.51 Score=48.49 Aligned_cols=251 Identities=10% Similarity=0.089 Sum_probs=132.2
Q ss_pred EEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCcee--EEEecCCc
Q 015650 100 FAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI--GELSFRSE 177 (403)
Q Consensus 100 l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~--~~~~~~~~ 177 (403)
++=-..++|++.+.+..... ..........|...+.+.....+++ + +.+.++++..++.. ........
T Consensus 486 ivQVt~~~Irli~~~~~~~~--~~w~~p~~~~I~~As~n~~~vvva~-g-------~~l~~fel~~~~L~~~~~~~l~~e 555 (1158)
T 3ei3_A 486 LIQITSASVRLVSQEPKALV--SEWKEPQAKNISVASCNSSQVVVAV-G-------RALYYLQIHPQELRQISHTEMEHE 555 (1158)
T ss_dssp EEEEESSCEEEEESSSCCEE--EEECCTTCCCCCEEEECSSEEEEEE-T-------TEEEEEEEETTEEEEEEEEECSSC
T ss_pred EEEEecCEEEEEECCCCeEE--EEEECCCCCEEEEEEeCCCEEEEEE-C-------CEEEEEEeeCCceeeecccCCCCc
Confidence 33334556777776544333 2232123345665565555555553 2 67888887766432 22336778
Q ss_pred eeEEEEecC------ceEEE---e-cCeEEEEEcCCceeeeEeeccC-CCceeEEEeeCCCeEEEEeeCCccCeEEEEEc
Q 015650 178 VRSVKLRRD------RIIVV---L-EQKIFVYNFADLKLLHQIETIA-NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHY 246 (403)
Q Consensus 178 i~~~~~~~~------~~~~~---~-d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~ 246 (403)
|.|+++.+. ..+++ . |++|+|+++.+.+.+....... .....+.+..-+...++.. |..||.+..+.+
T Consensus 556 vscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~i-gl~dG~l~~~~~ 634 (1158)
T 3ei3_A 556 VACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLC-ALGDGALFYFGL 634 (1158)
T ss_dssp EEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEE-EETTSEEEEEEE
T ss_pred eEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEE-EeCCCeEEEEEE
Confidence 999999763 23444 2 8999999998866654432211 1223344433334445543 557888877665
Q ss_pred cC--CceeE---EeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCC--CCEEE
Q 015650 247 AS--KRTKF---IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSN--AQWLA 319 (403)
Q Consensus 247 ~~--~~~~~---~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d--~~~l~ 319 (403)
+. +.+.. ..--..++.-..|...|..-+.++.+.. ..++-- .++....-. ....--....|+.. ..-++
T Consensus 635 d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp-~liy~~-~~~l~~s~l--~~~~v~~~~~F~se~~~~g~v 710 (1158)
T 3ei3_A 635 NIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRP-TVIYSS-NHKLVFSNV--NLKEVNYMCPLNSDGYPDSLA 710 (1158)
T ss_dssp CTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSC-EEEEES-SSSEEEEEB--SSSCCCEEEEECCSSSTTEEE
T ss_pred cCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCC-EEEEEc-CCceEEecc--ChHHhceEeccCcccCCCcEE
Confidence 43 33221 1111334444444444443333344444 445543 344332211 11111233345432 13444
Q ss_pred EEeCCCcEEEEEeecCCCCCCCCCCCCCCCCCcccccccccccccceeeeeeeeEEEEEeCCCceEEEeccCCCEEEEEc
Q 015650 320 VSSDKGTVHVFNLKVNSGSARSEPRSTSDPTLPTSSLSFIKGVLPKYFSSEWSVAQFRLVEGSPYIVAFGHQKNTVVILG 399 (403)
Q Consensus 320 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~d~~~l~~~~ 399 (403)
..+ ++.++|..+++-+ .|.+.++.+. ..+..++++|+.+.++++.
T Consensus 711 ~~~-~~~LrI~~i~~~~---------------------------------~~~~~~ipL~-~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 711 LAN-NSTLTIGTIDEIQ---------------------------------KLHIRTVPLY-ESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp EEC-SSCEEEEEECCSS---------------------------------SEEEEEEECS-SEEEEEEEEGGGTEEEEEE
T ss_pred EEc-CCceEEEEecccC---------------------------------CeeEEEEeCC-CCceEEEEcCCCCEEEEEE
Confidence 443 4569999986543 2445555553 4778899999888877765
Q ss_pred c
Q 015650 400 M 400 (403)
Q Consensus 400 ~ 400 (403)
.
T Consensus 756 ~ 756 (1158)
T 3ei3_A 756 S 756 (1158)
T ss_dssp E
T ss_pred E
Confidence 3
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.87 E-value=0.18 Score=43.22 Aligned_cols=173 Identities=7% Similarity=0.009 Sum_probs=84.5
Q ss_pred ceEEEEECCCCceeEEEe--cCCceeEEEEecCceEEEec------------CeEEEEEcCCceeeeEeeccCCCceeEE
Q 015650 156 NKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVVLE------------QKIFVYNFADLKLLHQIETIANPKGLCA 221 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 221 (403)
..+.+||..+++-...-. ....-.+++.. ++.+++.. +.+.+||+.+.+-...-..........+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 578999988765332211 11111233333 44444422 3588999877543221111111111122
Q ss_pred EeeCCCeEEEEeeCCc----cCeEEEEEccCCceeEEeec---CCceEEEEEcCCCCEEEEEeCC-----CcEEEEEEcC
Q 015650 222 VSQGVGSLVLVCPGLQ----KGQVRVEHYASKRTKFIMAH---DSRIACFALTQDGQLLATSSTK-----GTLVRIFNTL 289 (403)
Q Consensus 222 ~~~~~~~~~~~~~g~~----d~~i~v~d~~~~~~~~~~~~---~~~i~~~~~sp~g~~l~s~~~d-----g~~i~iwd~~ 289 (403)
... ++.++++ .|.. ...+.+||..+..-..+... ...-..+.+ ++++++.|+.+ .. +.+||..
T Consensus 118 ~~~-~~~iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~ 192 (308)
T 1zgk_A 118 GVI-DGHIYAV-GGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNS-AECYYPE 192 (308)
T ss_dssp EEE-TTEEEEE-CCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCC-EEEEETT
T ss_pred EEE-CCEEEEE-cCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCce-EEEEeCC
Confidence 222 3444443 3422 24688899887654443221 111222333 67777777754 34 8999987
Q ss_pred CCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCC-----CcEEEEEeecCC
Q 015650 290 DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK-----GTVHVFNLKVNS 336 (403)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~d-----g~v~iwd~~~~~ 336 (403)
+.+-...-........-..+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 193 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 193 RNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 7654322111111111222333 66777777654 458888877654
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.78 E-value=0.21 Score=42.55 Aligned_cols=173 Identities=9% Similarity=0.043 Sum_probs=85.9
Q ss_pred ceEEEEECCCCceeEEEe--cCCceeEEEEecCceEEEe--------cCeEEEEEcCCce---eeeEeeccCCCceeEEE
Q 015650 156 NKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVVL--------EQKIFVYNFADLK---LLHQIETIANPKGLCAV 222 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--------d~~i~i~d~~~~~---~~~~~~~~~~~~~~~~~ 222 (403)
..+.+||..+++-...-. ....-.+++.. ++.+++. -+.+.+||+.+.+ -...-..........+.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 578899988765332211 11111233333 3444442 1369999988755 22211111111122222
Q ss_pred eeCCCeEEEEeeCCc----cCeEEEEEccCCceeEEeecC---CceEEEEEcCCCCEEEEEeCC-----CcEEEEEEcCC
Q 015650 223 SQGVGSLVLVCPGLQ----KGQVRVEHYASKRTKFIMAHD---SRIACFALTQDGQLLATSSTK-----GTLVRIFNTLD 290 (403)
Q Consensus 223 ~~~~~~~~~~~~g~~----d~~i~v~d~~~~~~~~~~~~~---~~i~~~~~sp~g~~l~s~~~d-----g~~i~iwd~~~ 290 (403)
.. ++.++++ .|.. ...+.+||..+..-..+.... ..-.++.+ ++++++.|+.+ .. +.+||..+
T Consensus 110 ~~-~~~lyv~-GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~~d~~~ 184 (301)
T 2vpj_A 110 TL-GDMIYVS-GGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNS-VEKYDPHT 184 (301)
T ss_dssp EE-TTEEEEE-CCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCC-EEEEETTT
T ss_pred EE-CCEEEEE-cccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccce-EEEEeCCC
Confidence 22 3444444 3422 246888998886654443211 11122222 67777777754 34 89999887
Q ss_pred CcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCC-----CcEEEEEeecCC
Q 015650 291 GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK-----GTVHVFNLKVNS 336 (403)
Q Consensus 291 ~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~d-----g~v~iwd~~~~~ 336 (403)
.+-...-...........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 185 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 185 GHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 755432111111111222333 56777777754 457888877654
No 324
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.70 E-value=0.53 Score=46.14 Aligned_cols=233 Identities=9% Similarity=0.016 Sum_probs=126.4
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEEcCCCe--eEEEEecc----cCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEE
Q 015650 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFR--EIFRRDFE----RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~--~~~~~~~~----~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (403)
..|.++.-..+|.+.+.. .+|+..++..++. ........ .-....|.++....++...++.. +-|.
T Consensus 324 ~~v~~i~~D~~g~lWiGt-~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~-------~GL~ 395 (758)
T 3ott_A 324 NQFYSLFRDSKGFYWFGG-ANGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIATD-------GSIN 395 (758)
T ss_dssp CBEEEEEECTTCCEEEEE-TTEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEET-------TEEE
T ss_pred ceEEEEEEcCCCCEEEee-CCcceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEeC-------CcHh
Confidence 468888877778776654 5677777654321 11001110 01223578887777665544443 4588
Q ss_pred EEECCCCceeEEEe-------cCCceeEEEEecCceEEE-e-cCeEEEEEcCCc-----eee---eEeecc----CCCce
Q 015650 160 IWDDHQSRCIGELS-------FRSEVRSVKLRRDRIIVV-L-EQKIFVYNFADL-----KLL---HQIETI----ANPKG 218 (403)
Q Consensus 160 iwd~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~-~-d~~i~i~d~~~~-----~~~---~~~~~~----~~~~~ 218 (403)
.+|..+++...-.. ....|.++....++.+.+ + .+-|.++|..+. ... ..+... ...+.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 475 (758)
T 3ott_A 396 RYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFIN 475 (758)
T ss_dssp EEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEE
T ss_pred hcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceee
Confidence 89987765432211 123577888877776655 4 467889986531 111 111111 11234
Q ss_pred eEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeec----CCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEE
Q 015650 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAH----DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLL 294 (403)
Q Consensus 219 ~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~----~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~ 294 (403)
.+....++. ++++. |.. +-|..+|..++....+... ...+.++....+|.+.+ |+.. . |..||..+++..
T Consensus 476 ~i~~d~~g~-lWi~~-~t~-~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWi-gt~~-G-l~~~~~~~~~~~ 549 (758)
T 3ott_A 476 QIIPDNEGN-VWVLL-YNN-KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWV-GFHG-G-VMRINPKDESQQ 549 (758)
T ss_dssp EEEECTTSC-EEEEE-TTC-SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEE-EETT-E-EEEECC--CCCC
T ss_pred eEEEcCCCC-EEEEc-cCC-CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEE-EecC-c-eEEEecCCCceE
Confidence 444433332 34322 323 4577889887766655321 24678888888887654 4554 5 888987655432
Q ss_pred EEEe-cCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 295 QEVR-RGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 295 ~~~~-~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
.+. .+.....|.++... +|. |..++.+| |..||..+.+
T Consensus 550 -~~~~~gl~~~~i~~i~~~-~g~-lWi~t~~G-l~~~~~~~~~ 588 (758)
T 3ott_A 550 -SISFGSFSNNEILSMTCV-KNS-IWVSTTNG-LWIIDRKTMD 588 (758)
T ss_dssp -BCCCCC---CCEEEEEEE-TTE-EEEEESSC-EEEEETTTCC
T ss_pred -EecccCCCccceEEEEEC-CCC-EEEECCCC-eEEEcCCCce
Confidence 111 11122468888764 555 44455566 7777776554
No 325
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.69 E-value=0.25 Score=42.27 Aligned_cols=172 Identities=8% Similarity=0.009 Sum_probs=95.8
Q ss_pred eeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCceEEE-e---c-------------CeEEEE
Q 015650 137 FRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-L---E-------------QKIFVY 199 (403)
Q Consensus 137 ~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~---d-------------~~i~i~ 199 (403)
+..+..++.....+ +.|+..+..... ...+... . +--+++++.++. . + ..|+..
T Consensus 23 ~~g~~iy~~n~~d~-----~~ly~~~~dg~~-~~~l~~~-~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i 93 (302)
T 3s25_A 23 ESDGEVFFSNTNDN-----GRLYAMNIDGSN-IHKLSND-T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRI 93 (302)
T ss_dssp EETTEEEEEEGGGT-----TEEEEEETTSCS-CEEEEEE-E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEE
T ss_pred EeCCEEEEEeCCCC-----ceEEEEcCCCCC-CEEccCC-c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEE
Confidence 34445555544333 566666643333 3333311 1 234566776666 1 1 357777
Q ss_pred EcCCceeeeEeeccCCCceeEEEeeCCCeEEEEe-eCCccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeC
Q 015650 200 NFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC-PGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSST 278 (403)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~ 278 (403)
++...+.. .+.. . ....++++++.++++. .......|...++.......+..+.. ..++++++.|+-.+.
T Consensus 94 ~~dg~~~~-~l~~--~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 94 KRNGHGST-VLDP--D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNP 164 (302)
T ss_dssp ETTSCCCE-EEEC--S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECT
T ss_pred eCCCCcce-Eeec--C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeC
Confidence 77655432 2221 1 2336788888877664 11235667777887766666665543 456788998886665
Q ss_pred -CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEee
Q 015650 279 -KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 279 -dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~ 333 (403)
... |.+.++..+.....+.. ... ..+.|++++|+-...++.-+|+.+.
T Consensus 165 g~~~-Iy~~~l~g~~~~~l~~~-----~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ 213 (302)
T 3s25_A 165 KNGQ-LYRYDTASQSEALFYDC-----NCY-KPVVLDDTNVYYMDVNRDNAIVHVN 213 (302)
T ss_dssp TTCC-EEEEETTTTEEEEEECS-----CEE-EEEEEETTEEEEEEGGGTTEEEEEC
T ss_pred CCce-EEEEECCCCCEEEEeCC-----Ccc-ceeeecCCEEEEEEcCCCcEEEEEE
Confidence 456 88888866654433331 222 2355999988766543323444443
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.63 E-value=0.28 Score=42.11 Aligned_cols=218 Identities=13% Similarity=0.099 Sum_probs=101.7
Q ss_pred EEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCC-----CCCCCCCceEEEEECCCCceeEEEe
Q 015650 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG-----PDPQYPLNKVMIWDDHQSRCIGELS 173 (403)
Q Consensus 99 ~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-----~d~~~~~~~i~iwd~~~~~~~~~~~ 173 (403)
+++.|+ +.+.+||..+.+-.. ..+.......-.++....+.+++++|. .........+.+||..+++-...-.
T Consensus 7 l~~~GG-~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE-EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET-TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC-CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344554 568999988776543 333211122233344445566666652 1100001237888887765422111
Q ss_pred cC--CceeEEEEecCceEEE--ec--------CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCC-c---
Q 015650 174 FR--SEVRSVKLRRDRIIVV--LE--------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL-Q--- 237 (403)
Q Consensus 174 ~~--~~i~~~~~~~~~~~~~--~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~--- 237 (403)
.. ..-.+++...+..+++ .+ +.+.+||+.+.+-...-..........+... ++.+++. .|. .
T Consensus 85 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~-GG~~~~~~ 162 (315)
T 4asc_A 85 LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH-MDLVYVI-GGKGSDRK 162 (315)
T ss_dssp BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEE-CCBCTTSC
T ss_pred CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE-CCEEEEE-eCCCCCCc
Confidence 11 1112233333333333 11 3588999887542221111111112222223 3444443 343 1
Q ss_pred -cCeEEEEEccCCceeEEeecC---CceEEEEEcCCCCEEEEEeCCCc----EEEEEEcCCCcEEEEEecCCCcccEEEE
Q 015650 238 -KGQVRVEHYASKRTKFIMAHD---SRIACFALTQDGQLLATSSTKGT----LVRIFNTLDGTLLQEVRRGADRAEIYSL 309 (403)
Q Consensus 238 -d~~i~v~d~~~~~~~~~~~~~---~~i~~~~~sp~g~~l~s~~~dg~----~i~iwd~~~~~~~~~~~~~~~~~~v~~l 309 (403)
-..+.+||..+..-..+.... ....++.+ ++++++.|+.++. .+.+||..+.+-...-...........+
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 240 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV 240 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred ccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE
Confidence 246888998876544433211 11122223 6777788776542 2889998877543322111111112223
Q ss_pred EeCCCCCEEEEEeCC
Q 015650 310 AFSSNAQWLAVSSDK 324 (403)
Q Consensus 310 ~~s~d~~~l~s~~~d 324 (403)
.+ ++++++.|+.+
T Consensus 241 ~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 241 SL--VGTLYAIGGFA 253 (315)
T ss_dssp EE--TTEEEEEEEEE
T ss_pred EE--CCEEEEECCcc
Confidence 33 66777777753
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.51 E-value=0.38 Score=42.11 Aligned_cols=138 Identities=16% Similarity=0.091 Sum_probs=62.6
Q ss_pred CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCc-----cCeEEEEEc--cCCceeEEeec---CCceEE
Q 015650 194 QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ-----KGQVRVEHY--ASKRTKFIMAH---DSRIAC 263 (403)
Q Consensus 194 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----d~~i~v~d~--~~~~~~~~~~~---~~~i~~ 263 (403)
+.+.+||+.+.+-...-..........+....++.+++. .|.. ...+.+||+ .+..-..+... ......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~-GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLI-NGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEE-CCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEE-eeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 479999988754322211111111101222224455544 3421 345677776 44333332221 111111
Q ss_pred EEEcCCCCEEEEEeCC----------------------CcEEEEEEcCCCcEEE--EEecCCCcccEEEEEeCCCCCEEE
Q 015650 264 FALTQDGQLLATSSTK----------------------GTLVRIFNTLDGTLLQ--EVRRGADRAEIYSLAFSSNAQWLA 319 (403)
Q Consensus 264 ~~~sp~g~~l~s~~~d----------------------g~~i~iwd~~~~~~~~--~~~~~~~~~~v~~l~~s~d~~~l~ 319 (403)
.+...++++++.|+.+ .. +.+||+.+.+-.. .+... ...-.++. .++++++
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~yd~~~~~W~~~~~~p~~--r~~~~~~~--~~~~i~v 321 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYS-TDIHLWHNGKWDKSGELSQG--RAYGVSLP--WNNSLLI 321 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEEC-CEEEECC---CEEEEECSSC--CBSSEEEE--ETTEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceee-EEEEecCCCceeeCCCCCCC--cccceeEE--eCCEEEE
Confidence 1222367777777632 24 7899988664332 22211 11122222 3678888
Q ss_pred EEeCCC------cEEEEEeecCCC
Q 015650 320 VSSDKG------TVHVFNLKVNSG 337 (403)
Q Consensus 320 s~~~dg------~v~iwd~~~~~~ 337 (403)
.|+.++ .|.++++++++-
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSC
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEe
Confidence 888543 366668887763
No 328
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.39 E-value=0.34 Score=42.22 Aligned_cols=160 Identities=11% Similarity=0.000 Sum_probs=89.9
Q ss_pred cCCceeEEEEecCceEEEe---cCeEEEEEcCCceee--eEee----ccCCCceeEEEeeC---CCeEEEEeeCCccCeE
Q 015650 174 FRSEVRSVKLRRDRIIVVL---EQKIFVYNFADLKLL--HQIE----TIANPKGLCAVSQG---VGSLVLVCPGLQKGQV 241 (403)
Q Consensus 174 ~~~~i~~~~~~~~~~~~~~---d~~i~i~d~~~~~~~--~~~~----~~~~~~~~~~~~~~---~~~~~~~~~g~~d~~i 241 (403)
.-.....|+|.|||.+++. .|.|++++..+++.. ..+. ........++++|+ +..+|+..+...++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3456789999999988883 678999986555432 1111 12234456888885 4566665443345566
Q ss_pred EEEEccCC-----c---ee-EEe----ecCCceEEEEEcCCCCEEEEEeC-------------CCcEEEEEEcCCCc---
Q 015650 242 RVEHYASK-----R---TK-FIM----AHDSRIACFALTQDGQLLATSST-------------KGTLVRIFNTLDGT--- 292 (403)
Q Consensus 242 ~v~d~~~~-----~---~~-~~~----~~~~~i~~~~~sp~g~~l~s~~~-------------dg~~i~iwd~~~~~--- 292 (403)
.-|.+... . .. .+. .....-..|.|.|||.++++.+. .|. |.-.+.. ++
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~-IlRi~~d-G~ip~ 187 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGK-ILRMTPD-GEPAP 187 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTC-EEEECTT-SSBCT
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCE-EEEEeCC-CCccC
Confidence 66666541 1 11 111 11223467999999987776542 244 4444432 22
Q ss_pred -----EEEEEecCCCcccEEEEEeCCCCCEEEEEe-CCCcEEEEEeecCCC
Q 015650 293 -----LLQEVRRGADRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVNSG 337 (403)
Q Consensus 293 -----~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~-~dg~v~iwd~~~~~~ 337 (403)
....+..+ + .....++|+|+|.++++=. .|+.=.|-.+..+.+
T Consensus 188 ~nPf~~~~i~a~G-~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~n 236 (347)
T 3das_A 188 GNPFPGSPVYSYG-H-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDN 236 (347)
T ss_dssp TCSSTTCCEEEBC-C-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCB
T ss_pred CCCCCCCeEEeeC-C-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCE
Confidence 01122211 3 2456899999987665542 344445555555554
No 329
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.32 E-value=0.42 Score=40.65 Aligned_cols=173 Identities=16% Similarity=0.120 Sum_probs=83.7
Q ss_pred ceEEEEECCCCceeEEEe--cCCceeEEEEecCceEEEe--------cCeEEEEEcCCceeeeEeeccCCCceeEEEeeC
Q 015650 156 NKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVVL--------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQG 225 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (403)
..+..||+.+.+-...-. ....-.+++.. ++.+++. -..+.+||..+.+-...-..........+...
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~- 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL- 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-
Confidence 468889988775332211 11111233333 4444442 13688999887643222111111111222222
Q ss_pred CCeEEEEeeCCcc----CeEEEEEccCCceeEEeecC---CceEEEEEcCCCCEEEEEeCC-------CcEEEEEEcCCC
Q 015650 226 VGSLVLVCPGLQK----GQVRVEHYASKRTKFIMAHD---SRIACFALTQDGQLLATSSTK-------GTLVRIFNTLDG 291 (403)
Q Consensus 226 ~~~~~~~~~g~~d----~~i~v~d~~~~~~~~~~~~~---~~i~~~~~sp~g~~l~s~~~d-------g~~i~iwd~~~~ 291 (403)
++.++++ .|... ..+.+||+.+..-..+.... .....+.+ ++++++.|+.+ .. +.+||..+.
T Consensus 108 ~~~iyv~-GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~-~~~yd~~~~ 183 (302)
T 2xn4_A 108 NGLLYAV-GGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLST-VECYNATTN 183 (302)
T ss_dssp TTEEEEE-EEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCC-EEEEETTTT
T ss_pred CCEEEEE-cCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccE-EEEEeCCCC
Confidence 3444444 34221 35778888876655443211 11122222 66777776642 34 889998877
Q ss_pred cEEEEEecCCCcccEEEEEeCCCCCEEEEEeCC-----CcEEEEEeecCC
Q 015650 292 TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK-----GTVHVFNLKVNS 336 (403)
Q Consensus 292 ~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~d-----g~v~iwd~~~~~ 336 (403)
+-...-...........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 184 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 184 EWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred cEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 54432111111111222233 66777777754 357788876654
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.29 E-value=0.045 Score=47.54 Aligned_cols=106 Identities=13% Similarity=0.140 Sum_probs=59.2
Q ss_pred EEEEc-CCcEEEEEcCCCeeEEEEecccCcceeEEEEee---eCC-eEEEeeCCCCCCCCCceEEEEECCCCceeEEEec
Q 015650 100 FAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF---RCN-ILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (403)
Q Consensus 100 l~~~~-~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~-~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~ 174 (403)
+++++ |+.|.-+|.++++........ ...+...... ..+ ..+++....| |.|..++..+|.....+.-
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~d-----G~l~a~~~~~G~~~~~~~~ 85 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGD-----GNIYYFNAHQGLQKLPLSI 85 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTT-----TEEEEEETTTEEEEEEEEH
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCC-----CEEEEEECCCCcEEeeecc
Confidence 33343 555777777777666543332 1112221110 112 3333432455 9999999988866555542
Q ss_pred C-----CceeE---EEE------ecCceEEE--ecCeEEEEEcCCceeeeEeec
Q 015650 175 R-----SEVRS---VKL------RRDRIIVV--LEQKIFVYNFADLKLLHQIET 212 (403)
Q Consensus 175 ~-----~~i~~---~~~------~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~ 212 (403)
. .++.. ..+ +.++.+++ .+++++..|+++|+.+.++..
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1 12221 001 24566665 589999999999999998864
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.17 E-value=0.59 Score=40.87 Aligned_cols=48 Identities=4% Similarity=-0.071 Sum_probs=26.9
Q ss_pred CeEEEEEccCCceeEEeecC--Cce-EEEEEcCCCCEEEEEeC------CCcEEEEEEc
Q 015650 239 GQVRVEHYASKRTKFIMAHD--SRI-ACFALTQDGQLLATSST------KGTLVRIFNT 288 (403)
Q Consensus 239 ~~i~v~d~~~~~~~~~~~~~--~~i-~~~~~sp~g~~l~s~~~------dg~~i~iwd~ 288 (403)
..+.+||..+..-..+..-. ... .+++.. ++++++.|+. ... +.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~-v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDA-VFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCC-EEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCc-eEEEEe
Confidence 57889998886654443211 111 222222 6667777664 234 777886
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.13 E-value=1.5 Score=45.09 Aligned_cols=236 Identities=11% Similarity=0.103 Sum_probs=127.0
Q ss_pred CCCeEEEEEcCC------CCEEEEEc--CCcEEEEEcCCCeeEEEEecccC-cceeEEEEeeeCCeEEEeeCCCCCCCCC
Q 015650 85 PPTLLHISFNQD------HGCFAAGT--DHGFRIYNCDPFREIFRRDFERG-GGIGVVEMLFRCNILALVGGGPDPQYPL 155 (403)
Q Consensus 85 ~~~i~~i~~s~d------~~~l~~~~--~~~i~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~s~~~d~~~~~ 155 (403)
...|.|+++.+. ++++++|. |+.|+|+++...+......+... ....+.-..+ ....++..+-.|
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~-~~~~~L~igl~d----- 626 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF-ESSHYLLCALGD----- 626 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE-TTEEEEEEEETT-----
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe-CCCcEEEEEeCC-----
Confidence 457999999764 36889887 55699999998777765666411 1122222222 345566666666
Q ss_pred ceEEEEEC--CCCceeEE--Ee-cCCceeEEEEecCce--EEE-ecCeEEEEEcCCceeeeEeeccCCCc-eeEEEeeC-
Q 015650 156 NKVMIWDD--HQSRCIGE--LS-FRSEVRSVKLRRDRI--IVV-LEQKIFVYNFADLKLLHQIETIANPK-GLCAVSQG- 225 (403)
Q Consensus 156 ~~i~iwd~--~~~~~~~~--~~-~~~~i~~~~~~~~~~--~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~- 225 (403)
|.+.-+.+ .+|++... .. ...++.-..+...+. .++ ++....+|.-+ ++.... ......+ ....|+..
T Consensus 627 G~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~ 704 (1158)
T 3ei3_A 627 GALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDG 704 (1158)
T ss_dssp SEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCSS
T ss_pred CeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCccc
Confidence 77755544 45554432 12 344554444444332 222 46655555533 332211 1111222 33444432
Q ss_pred -CCeEEEEeeCCccCeEEEEEccCCc-e-eEEeecCCceEEEEEcCCCCEEEEEeCC-----------------------
Q 015650 226 -VGSLVLVCPGLQKGQVRVEHYASKR-T-KFIMAHDSRIACFALTQDGQLLATSSTK----------------------- 279 (403)
Q Consensus 226 -~~~~~~~~~g~~d~~i~v~d~~~~~-~-~~~~~~~~~i~~~~~sp~g~~l~s~~~d----------------------- 279 (403)
++.++++ .++.++|..+..-. . .....-...+..++++|+.+.++.+..+
T Consensus 705 ~~~g~v~~----~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1158)
T 3ei3_A 705 YPDSLALA----NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALS 780 (1158)
T ss_dssp STTEEEEE----CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSE
T ss_pred CCCcEEEE----cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhh
Confidence 3444433 23568887765421 1 1111234566777777766655443211
Q ss_pred --------------------------CcEEEEEEcCCCcEEEEEecCCCcccEEEEE---eCCC-CCEEEEEe-------
Q 015650 280 --------------------------GTLVRIFNTLDGTLLQEVRRGADRAEIYSLA---FSSN-AQWLAVSS------- 322 (403)
Q Consensus 280 --------------------------g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~---~s~d-~~~l~s~~------- 322 (403)
+. |++.|-.+.+.+..+.-. ....+.+++ |..+ ..+|++|+
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~-i~lidp~t~~~i~~~~l~-~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e 858 (1158)
T 3ei3_A 781 SSVSSSKLFSSSTAPHETSFGEEVEVHN-LLIIDQHTFEVLHAHQFL-QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE 858 (1158)
T ss_dssp EEECCCCCC----------CCCEEEEEE-EEEEETTTCCEEEEEECC-TTEEEEEEEEECCTTCCCCEEEEEEEECCTTC
T ss_pred hcccccccccccccCchhhcCCceeeEE-EEEEeCCCCeEEEEEeCC-CCcceEEEEEEEEccCCCEEEEEEeeecCCCC
Confidence 23 778888788877766643 224455544 4433 46888876
Q ss_pred ---CCCcEEEEEeec
Q 015650 323 ---DKGTVHVFNLKV 334 (403)
Q Consensus 323 ---~dg~v~iwd~~~ 334 (403)
..|.|++|++..
T Consensus 859 ~~~~~Gri~vf~v~~ 873 (1158)
T 3ei3_A 859 AEPKQGRIVVFQYSD 873 (1158)
T ss_dssp SSCCCEEEEEEEEET
T ss_pred CCCCceEEEEEEEEC
Confidence 357899999983
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.87 E-value=0.69 Score=42.13 Aligned_cols=63 Identities=16% Similarity=0.284 Sum_probs=40.0
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEE--EEecC----CCcccEEEEEeCCC---CCEEEEEe
Q 015650 259 SRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ--EVRRG----ADRAEIYSLAFSSN---AQWLAVSS 322 (403)
Q Consensus 259 ~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~--~~~~~----~~~~~v~~l~~s~d---~~~l~s~~ 322 (403)
.....|+|.|+|+++++-...+. |++++..+++... .+... .....+..|+|+|| +.+|..+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~-I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGK-ILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCE-EEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCceEEEEcCCCcEEEEEcCCCE-EEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 35679999999997776544456 8888765555432 22211 02356789999996 55554443
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.71 E-value=1.2 Score=40.59 Aligned_cols=107 Identities=12% Similarity=0.062 Sum_probs=60.1
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCc-EEEEEcCCCeeEEEEeccc-----CcceeEEEEeeeC----CeEEEeeCCC-----
Q 015650 85 PPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFER-----GGGIGVVEMLFRC----NILALVGGGP----- 149 (403)
Q Consensus 85 ~~~i~~i~~s~d~~~l~~~~~~~-i~iw~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~----~~~~~~s~~~----- 149 (403)
-.....|+|.|+|+++++-..++ |++++...+.......+.. ........++++| ++.+.++...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 44678999999999888877654 7777654444332233321 1345678899997 4444443321
Q ss_pred -CCC-CCCceEEEEECCCC--c-----eeE-EEe--cCCceeEEEEecCceEEE
Q 015650 150 -DPQ-YPLNKVMIWDDHQS--R-----CIG-ELS--FRSEVRSVKLRRDRIIVV 191 (403)
Q Consensus 150 -d~~-~~~~~i~iwd~~~~--~-----~~~-~~~--~~~~i~~~~~~~~~~~~~ 191 (403)
+.. .....|.-|+...+ + .+. .+. .......|+|.|||.+.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv 159 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYY 159 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEE
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEE
Confidence 000 00034555554322 1 111 122 123468899999998776
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.55 E-value=0.98 Score=38.55 Aligned_cols=214 Identities=10% Similarity=0.003 Sum_probs=111.0
Q ss_pred EcCCCCEEEEEc--CCc-EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCC-------CCCceEEEEE
Q 015650 93 FNQDHGCFAAGT--DHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ-------YPLNKVMIWD 162 (403)
Q Consensus 93 ~s~d~~~l~~~~--~~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~-------~~~~~i~iwd 162 (403)
|+.+|..|.... ++. |...+.+..... .+. ...+..+....+.++.+.....+. .....|+..+
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~---~l~---~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~ 94 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIH---KLS---NDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIK 94 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCE---EEE---EEEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCE---Ecc---CCceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEe
Confidence 345677776664 233 555555443322 221 122344444445555444322000 0015677778
Q ss_pred CCCCceeEEEecCCceeEEEEecCceEEE-ec----C--eEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeC
Q 015650 163 DHQSRCIGELSFRSEVRSVKLRRDRIIVV-LE----Q--KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (403)
Q Consensus 163 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~d----~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 235 (403)
+..++....... . ...+++++..++ .+ + .|+..++.. .....+..+.. ..++++++.+++..
T Consensus 95 ~dg~~~~~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~-- 163 (302)
T 3s25_A 95 RNGHGSTVLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNN-- 163 (302)
T ss_dssp TTSCCCEEEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEEC--
T ss_pred CCCCcceEeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEe--
Confidence 776653332222 1 235667766666 33 3 566666653 33344433222 45688888877664
Q ss_pred CccCeEEEEEccCCceeEEeecCCceEEEEEcCCCCEEEEEeCCC-cEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCC
Q 015650 236 LQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG-TLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSN 314 (403)
Q Consensus 236 ~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg-~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d 314 (403)
.....|.+.++.++..+.+.. +... ..+.|++.+|+-....+ ..|..-++..... ..+.. ..+ ..|+|+
T Consensus 164 ~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~----~~~--~~~~~~ 233 (302)
T 3s25_A 164 PKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTE----ANI--EHYNVY 233 (302)
T ss_dssp TTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSC----SCE--EEEEEE
T ss_pred CCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeC----CCc--ceEEEC
Confidence 246788888888866655532 2222 34669999888765443 2266666654443 34432 233 347788
Q ss_pred CCEEEEEeCCCcEEEEEee
Q 015650 315 AQWLAVSSDKGTVHVFNLK 333 (403)
Q Consensus 315 ~~~l~s~~~dg~v~iwd~~ 333 (403)
+++|.-+...+.-.|+.+.
T Consensus 234 g~~Iy~~~~~~~~~i~~~~ 252 (302)
T 3s25_A 234 GSLIFYQRGGDNPALCVVK 252 (302)
T ss_dssp TTEEEEEECSSSCEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEE
Confidence 9988765432223444443
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.45 E-value=0.016 Score=46.47 Aligned_cols=68 Identities=16% Similarity=0.150 Sum_probs=43.3
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcE------EEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEe
Q 015650 259 SRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL------LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNL 332 (403)
Q Consensus 259 ~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~------~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~ 332 (403)
..+..++|+|+|.+.+. .+|. ++-.+..+... -..+-.. .-....++.|.|+|.+.++ .||.|+-++-
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~-Ly~~~~~t~~~~~W~~s~t~IG~~-Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDK-IYKGTPPTHDNDNWMGRAKKIGNG-GWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTE-EEEESCCCSTTCCHHHHCEEEECS-CGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCe-EEEECCCCCCcccccccccEeccc-ccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 36789999999986665 6776 66666544211 1122110 0112478999999998877 4688876654
No 337
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.42 E-value=1.2 Score=38.90 Aligned_cols=135 Identities=13% Similarity=0.062 Sum_probs=75.7
Q ss_pred eEEEEeeeCCeE-EEeeCCCCCCCCCceEEEEECCCCcee---EEE----e-cCCceeEEEEecC----ceEEEe-----
Q 015650 131 GVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDDHQSRCI---GEL----S-FRSEVRSVKLRRD----RIIVVL----- 192 (403)
Q Consensus 131 ~v~~~~~~~~~~-~~~s~~~d~~~~~~~i~iwd~~~~~~~---~~~----~-~~~~i~~~~~~~~----~~~~~~----- 192 (403)
....++|.+++. ++++.. . |.|++++. .++.. ..+ . .......|+++|+ +.+.+.
T Consensus 19 ~P~~i~~~pdG~~l~V~e~-~-----G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~ 91 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLR-G-----GELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVG 91 (353)
T ss_dssp SEEEEEECSTTCCEEEEET-T-----TEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEEC
T ss_pred CcEEEEEcCCCCEEEEEeC-C-----ceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCC
Confidence 457888999987 666654 4 88999984 33321 111 1 2345789999995 444442
Q ss_pred -----cCeEEEEEcCCc--e--eeeE-eec------cCCCceeEEEeeCCCeEEEEeeCCc------------cCeEEEE
Q 015650 193 -----EQKIFVYNFADL--K--LLHQ-IET------IANPKGLCAVSQGVGSLVLVCPGLQ------------KGQVRVE 244 (403)
Q Consensus 193 -----d~~i~i~d~~~~--~--~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~g~~------------d~~i~v~ 244 (403)
...|..|++... + ..+. +.. ..+....++|.+++ .+|++. |.. .+.|.-+
T Consensus 92 ~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~-Gd~~~~~~~q~~~~~~g~I~ri 169 (353)
T 2g8s_A 92 DDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIAL-GENNQRPTAQDLDKLQGKLVRL 169 (353)
T ss_dssp SSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEE-CCTTCGGGGGCTTSCTTEEEEE
T ss_pred CCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEE-CCCCCCCccCCCCCCCeEEEEE
Confidence 135777776432 1 1111 111 11223569999987 566654 321 2467777
Q ss_pred EccCC-------------ceeEE-eecCCceEEEEEcC-CCCEEEE
Q 015650 245 HYASK-------------RTKFI-MAHDSRIACFALTQ-DGQLLAT 275 (403)
Q Consensus 245 d~~~~-------------~~~~~-~~~~~~i~~~~~sp-~g~~l~s 275 (403)
+.+.. ....+ .++ .....++|+| +|+++++
T Consensus 170 ~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 170 TDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp ETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred CCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 76643 12222 233 3468899999 5655443
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.30 E-value=1.8 Score=40.04 Aligned_cols=219 Identities=7% Similarity=-0.039 Sum_probs=117.7
Q ss_pred CCCCEEEEEcC-Cc-EEEEEcCCCeeEEEEecccCcceeEEEEeee--CCeEEEeeCCCCCC------------CCC--c
Q 015650 95 QDHGCFAAGTD-HG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQ------------YPL--N 156 (403)
Q Consensus 95 ~d~~~l~~~~~-~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~~~d~~------------~~~--~ 156 (403)
-||++|..-.. +. |...+++..+......+. ....+..+.|. |+..+++..++... ... +
T Consensus 140 yDGrylfiNdkan~RvAri~l~~~~~d~Ii~iP--n~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~ 217 (638)
T 3sbq_A 140 YDGKYLFINDKANSRVARIRLDIMKCDKMITVP--NVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYT 217 (638)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECT--TCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEE
T ss_pred eeeEEEEEecCCCcceEEEECCcEeeceeEeCC--CCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhce
Confidence 37899998873 33 777888888776555554 44455555554 44444444332200 000 1
Q ss_pred eEEEEECCCCceeEEEecCCceeEEEEecCceEEEe------------------cCeEEEEE------------------
Q 015650 157 KVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVL------------------EQKIFVYN------------------ 200 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------------d~~i~i~d------------------ 200 (403)
.....|..+.+...++.-......+...+++.+.++ -..+.++|
T Consensus 218 ~f~~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g 297 (638)
T 3sbq_A 218 MYNAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGD 297 (638)
T ss_dssp EEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTT
T ss_pred EEEEEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECC
Confidence 222234444444333333344444555555555541 01244444
Q ss_pred -------cCC----ce-eeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccC------Cce-------eEEe
Q 015650 201 -------FAD----LK-LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS------KRT-------KFIM 255 (403)
Q Consensus 201 -------~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~------~~~-------~~~~ 255 (403)
.+. +. .+..+... ..-..+.++|+++. ++++|-.+.++.++|++. ..+ ..-.
T Consensus 298 ~gv~ViD~~~~~~~~~~~~~~iP~p-ksPHGv~vsPDGky--i~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~ 374 (638)
T 3sbq_A 298 SKTPVLDGRKKDGKDSKFTRYVPVP-KNPHGCNTSSDGKY--FIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP 374 (638)
T ss_dssp CCCCEEECSCBTTBCCSSEEEEEES-SSCCCEEECTTSCE--EEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC
T ss_pred CCeeEEccccccccCCceEEEEeCC-CCCcceeeCCCCCE--EEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec
Confidence 332 11 11222221 22245778888885 444577889999999885 111 1111
Q ss_pred ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCC----------cEEEEEecCCCcccEEEEEe------CCCCCEEE
Q 015650 256 AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG----------TLLQEVRRGADRAEIYSLAF------SSNAQWLA 319 (403)
Q Consensus 256 ~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~----------~~~~~~~~~~~~~~v~~l~~------s~d~~~l~ 319 (403)
.-.-.....+|.++|....+.--|.. |.-|++... ..+..+..+. .+-.+.- .+||++|+
T Consensus 375 e~GlGPlHt~Fd~~G~aYTtlfidSq-vvkWni~~a~~~~~g~~~~~v~~k~dv~Y---qpGH~~~~~get~~~dGk~lv 450 (638)
T 3sbq_A 375 ELGLGPLHTTFDGRGNAYTTLFIDSQ-VVKWNMEEAVRAYKGEKVNYIKQKLDVHY---QPGHLHASLCETNEADGKWLV 450 (638)
T ss_dssp BCCSCEEEEEECSSSEEEEEETTTTE-EEEEEHHHHHHHHTTCCCCCEEEEEECSS---CEEEEEETTTTSTTCCSCEEE
T ss_pred cCCCcccEEEECCCCceEeeeeecce-EEEEeccHHHHHhcCccCCeeeecccccc---CCcccccCCCccCCCCccEEE
Confidence 12345678899999955555567888 999998653 4555666432 2333333 46788887
Q ss_pred EEe
Q 015650 320 VSS 322 (403)
Q Consensus 320 s~~ 322 (403)
+..
T Consensus 451 ~ln 453 (638)
T 3sbq_A 451 ALS 453 (638)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.20 E-value=0.96 Score=36.35 Aligned_cols=148 Identities=14% Similarity=0.009 Sum_probs=84.3
Q ss_pred CceeEEEEecCceEEE-ecCeEEEEEcCCcee------eeEee-ccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEcc
Q 015650 176 SEVRSVKLRRDRIIVV-LEQKIFVYNFADLKL------LHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (403)
Q Consensus 176 ~~i~~~~~~~~~~~~~-~d~~i~i~d~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~ 247 (403)
..+..++|+|++.+.+ .++.++-.+..+.+. -..+- ..-+....+.+.+++. +.+. .||.|+-++..
T Consensus 41 ~~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~--LYav---~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY--LYAV---SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC--EEEE---ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC--EEEe---CCCEEEEeCCC
Confidence 4677999999998777 788887777654211 11111 0011135566666654 4443 56888877653
Q ss_pred CCce-------eEE-eecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCc------EEEEEecCCCcccEEEEEeCC
Q 015650 248 SKRT-------KFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT------LLQEVRRGADRAEIYSLAFSS 313 (403)
Q Consensus 248 ~~~~-------~~~-~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~------~~~~~~~~~~~~~v~~l~~s~ 313 (403)
+... ..+ ..--..+..|.|.|+|.+.+.. |+. ++-+...++. ....+- ...-....-+.|.+
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~-lyr~~~P~~~~~~wl~~~~~~g-~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ-FYKALPPVSNQDNWLARATKIG-QGGWDTFKFLFFSS 191 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE-EEEECCCSSTTCCHHHHCEEEE-SSSGGGEEEEEECT
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc-EEecCCCCCCCcccccccceec-cCCcceEEEEEECC
Confidence 3111 111 1122468999999999877665 776 6544333221 111122 11223455677999
Q ss_pred CCCEEEEEeCCCcEEEEEeecCC
Q 015650 314 NAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 314 d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
++.++++. +| +||....++
T Consensus 192 ~G~l~~v~--~g--~~Y~~~~p~ 210 (236)
T 1tl2_A 192 VGTLFGVQ--GG--KFYEDYPPS 210 (236)
T ss_dssp TSCEEEEE--TT--EEEEESCCC
T ss_pred CCcEEEEe--CC--eEEecCCcc
Confidence 99888776 66 566665554
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.15 E-value=1.5 Score=38.21 Aligned_cols=232 Identities=9% Similarity=0.027 Sum_probs=122.5
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEecc---cCcceeEEEEeeeCC----eEEEe--eCC
Q 015650 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFE---RGGGIGVVEMLFRCN----ILALV--GGG 148 (403)
Q Consensus 79 ~~~~~~~~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~----~~~~~--s~~ 148 (403)
+.+...-.....|+|.|||+++++-. .+.|++++.+.+.......+. .........++++|+ +.+.+ +..
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 44555566788999999999888887 455888875544432222221 134567889999874 33333 222
Q ss_pred CCCCCCCceEEEEECCCC----------cee-EEEe--cCCceeEEEEecCceEEEe--c--------------CeEEEE
Q 015650 149 PDPQYPLNKVMIWDDHQS----------RCI-GELS--FRSEVRSVKLRRDRIIVVL--E--------------QKIFVY 199 (403)
Q Consensus 149 ~d~~~~~~~i~iwd~~~~----------~~~-~~~~--~~~~i~~~~~~~~~~~~~~--d--------------~~i~i~ 199 (403)
.+ +.|.-|.+..+ +.+ ..+. .......|.|.|||.+.++ | +.|.-+
T Consensus 105 ~~-----~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi 179 (347)
T 3das_A 105 SD-----NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRM 179 (347)
T ss_dssp SS-----EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEE
T ss_pred CC-----CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEE
Confidence 33 56666665542 111 1122 1224567999999987663 1 455555
Q ss_pred EcCCce--------eeeEee-ccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCc-------------------e
Q 015650 200 NFADLK--------LLHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-------------------T 251 (403)
Q Consensus 200 d~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~-------------------~ 251 (403)
+.. ++ ....+. ++.+ ..-++|.+++ .++++-.| .++.=.|.-+..+. +
T Consensus 180 ~~d-G~ip~~nPf~~~~i~a~G~RN-p~Gla~dp~G-~L~~~d~g-~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~ 255 (347)
T 3das_A 180 TPD-GEPAPGNPFPGSPVYSYGHRN-VQGLAWDDKQ-RLFASEFG-QDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPV 255 (347)
T ss_dssp CTT-SSBCTTCSSTTCCEEEBCCSB-CCEEEECTTC-CEEEEECC-SSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCS
T ss_pred eCC-CCccCCCCCCCCeEEeeCCCC-cceEEECCCC-CEEEEecC-CCCCceeeEEcCCCEecCCcccCCCCCccccCCc
Confidence 543 22 011221 2322 3467888854 44444333 33222222222211 1
Q ss_pred eEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcE---EEEEecCCCcccEEEEEeCCCCCEEEEEe
Q 015650 252 KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL---LQEVRRGADRAEIYSLAFSSNAQWLAVSS 322 (403)
Q Consensus 252 ~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~---~~~~~~~~~~~~v~~l~~s~d~~~l~s~~ 322 (403)
..+..+......|+|. +|.+++..-..+. |....+..... ...+... ....+.+|+..|||.++++..
T Consensus 256 ~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~-l~~v~~~~~~~~~~~e~~l~~-~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 256 AQWSTDEASPSGIAYA-EGSVWMAGLRGER-LWRIPLKGTAAAADPQAFLEG-EYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEECTTTCCEEEEEEE-TTEEEEEESTTCS-EEEEEEETTEESSCCEEESTT-TSSCEEEEEEEETTEEEEEEC
T ss_pred EecCCCCCCCcceEEE-cCceeeccccCCE-EEEEEecCCceecceEEeecC-CCCCccEEEECCCCcEEEEEc
Confidence 1122222355677776 4655555555555 66666654432 1222211 235799999999998766654
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.88 E-value=1.6 Score=37.30 Aligned_cols=217 Identities=12% Similarity=0.069 Sum_probs=99.1
Q ss_pred EEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCC---CCC--CCCceEEEEECCCCceeEE--
Q 015650 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP---DPQ--YPLNKVMIWDDHQSRCIGE-- 171 (403)
Q Consensus 99 ~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~---d~~--~~~~~i~iwd~~~~~~~~~-- 171 (403)
+++.|+ ..+.+||..+.+-.. ..+.......-.++....+.+++++|.. +.. .....+.+||..+.+-...
T Consensus 18 i~~~GG-~~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVND-TAAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECS-SEEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhccc-cceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 444444 347889987776443 2222111222334444556666666621 100 0012377888877654322
Q ss_pred EecCCceeEEEEecCceEEE--ec-------CeEEEEEcCCceeeeEeeccCCCce-eEEEeeCCCeEEEEeeCCc----
Q 015650 172 LSFRSEVRSVKLRRDRIIVV--LE-------QKIFVYNFADLKLLHQIETIANPKG-LCAVSQGVGSLVLVCPGLQ---- 237 (403)
Q Consensus 172 ~~~~~~i~~~~~~~~~~~~~--~d-------~~i~i~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~---- 237 (403)
+.....-.+++...+..+++ .+ ..+.+||+.+.+-...- ....+.. ..+.. .++.+++. .|..
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~-~~~~iyv~-GG~~~~~~ 172 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIKVYGHNVIS-HNGMIYCL-GGKTDDKK 172 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSCEESCEEEE-ETTEEEEE-CCEESSSC
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCcccccEEEE-ECCEEEEE-cCCCCCCC
Confidence 11111122333333334444 22 25888998875432211 1111111 11222 33444443 3421
Q ss_pred -cCeEEEEEccCCceeEEeecC---CceEEEEEcCCCCEEEEEeCCCc----EEEEEEcCCCcEEEEEecCCCcccEEEE
Q 015650 238 -KGQVRVEHYASKRTKFIMAHD---SRIACFALTQDGQLLATSSTKGT----LVRIFNTLDGTLLQEVRRGADRAEIYSL 309 (403)
Q Consensus 238 -d~~i~v~d~~~~~~~~~~~~~---~~i~~~~~sp~g~~l~s~~~dg~----~i~iwd~~~~~~~~~~~~~~~~~~v~~l 309 (403)
...+.+||..+..-..+.... ....++.+ ++++++.|+.++. .+.+||+.+.+-...-...........+
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 250 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV 250 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE
Confidence 245889999886655443211 11122222 6777777765431 1788998876543321111011111222
Q ss_pred EeCCCCCEEEEEeCC
Q 015650 310 AFSSNAQWLAVSSDK 324 (403)
Q Consensus 310 ~~s~d~~~l~s~~~d 324 (403)
.+ ++++++.|+.+
T Consensus 251 ~~--~~~i~v~GG~~ 263 (318)
T 2woz_A 251 SL--AGSLYAIGGFA 263 (318)
T ss_dssp EE--TTEEEEECCBC
T ss_pred EE--CCEEEEECCee
Confidence 22 56777777643
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.70 E-value=0.11 Score=45.09 Aligned_cols=111 Identities=14% Similarity=0.233 Sum_probs=67.3
Q ss_pred CceEEE--ecCeEEEEEcCCceeeeEeeccC-CCceeEEEe-e---CCCeEEEEeeCCccCeEEEEEccCCceeEEee--
Q 015650 186 DRIIVV--LEQKIFVYNFADLKLLHQIETIA-NPKGLCAVS-Q---GVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA-- 256 (403)
Q Consensus 186 ~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~-~---~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~-- 256 (403)
++.+++ .||.|+-+|..+|+.+..++... .+ .+... + .+...+++. ...||.|..++..++..+.-..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p--~~~~~~~~~~~~~~~~vv~-p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQP--LIEIQEPSRLETYETLIIE-PFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCC--SEECCCSCTTTSSEEEEEC-CSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCC--cEEecCCccccCCcEEEEE-ECCCCEEEEEECCCCcEEeeeccc
Confidence 444455 59999999999999999887641 11 11111 1 122333332 2368999999987764332111
Q ss_pred ---cCCceEE---EEE-c----CCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecC
Q 015650 257 ---HDSRIAC---FAL-T----QDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG 300 (403)
Q Consensus 257 ---~~~~i~~---~~~-s----p~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~ 300 (403)
...++.. ..+ . ..+..+++|+.+|. +.-.|+.+|+.+.++...
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~-l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI-MYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEE-EEEEETTTCCEEEEESTT
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCE-EEEEECCCCcEEEEEecC
Confidence 1112211 000 0 14557889999999 999999999999988753
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.70 E-value=3.3 Score=40.01 Aligned_cols=197 Identities=14% Similarity=0.092 Sum_probs=97.7
Q ss_pred CCCCEEEEEcC-----CcEEEEEcCCCeeEEEE-e-----cccCcceeEEEEeee-CCeEEEeeCCCCCCCCCceEEEEE
Q 015650 95 QDHGCFAAGTD-----HGFRIYNCDPFREIFRR-D-----FERGGGIGVVEMLFR-CNILALVGGGPDPQYPLNKVMIWD 162 (403)
Q Consensus 95 ~d~~~l~~~~~-----~~i~iw~~~~~~~~~~~-~-----~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~~~~~~i~iwd 162 (403)
-++.+++.|+. +.+.+||..+.+-.... . +. ............ .+..++++|.....-....+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p-~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVP-VARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCC-CCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCC-ccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 56777777763 23888998776544333 2 11 111122222232 444555544332111125688999
Q ss_pred CCCCceeEE--EecCCceeEEEEecCceEEEecC-----eEEEEEcCCceeeeEe-----eccCCCceeEEEeeCCCeEE
Q 015650 163 DHQSRCIGE--LSFRSEVRSVKLRRDRIIVVLEQ-----KIFVYNFADLKLLHQI-----ETIANPKGLCAVSQGVGSLV 230 (403)
Q Consensus 163 ~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~d~-----~i~i~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 230 (403)
..+.+-... +.....-.+++...++.+++..| .+.+||+.+.+-...- .........+.+....+.++
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 887643322 11111222333323555555322 7999999875432211 11111112244444434555
Q ss_pred EEeeCCc------cCeEEEEEccCCc------eeEEeec---CCceEEEEEcCCCCEEEEEeCC--------CcEEEEEE
Q 015650 231 LVCPGLQ------KGQVRVEHYASKR------TKFIMAH---DSRIACFALTQDGQLLATSSTK--------GTLVRIFN 287 (403)
Q Consensus 231 ~~~~g~~------d~~i~v~d~~~~~------~~~~~~~---~~~i~~~~~sp~g~~l~s~~~d--------g~~i~iwd 287 (403)
+. .|.. ...+.+||+.+.. -..+... ...-.++....++++++.|+.+ .. |.+||
T Consensus 555 v~-GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-v~~yd 632 (695)
T 2zwa_A 555 IL-GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS-IISLD 632 (695)
T ss_dssp EE-CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS-EEEEE
T ss_pred EE-CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe-EEEEE
Confidence 44 3421 2468899998876 3333221 1111223333347778888742 45 89999
Q ss_pred cCCCcEE
Q 015650 288 TLDGTLL 294 (403)
Q Consensus 288 ~~~~~~~ 294 (403)
..+.+-.
T Consensus 633 ~~t~~W~ 639 (695)
T 2zwa_A 633 PLSETLT 639 (695)
T ss_dssp TTTTEEE
T ss_pred CCCCeEE
Confidence 9887654
No 344
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.34 E-value=2.1 Score=36.27 Aligned_cols=191 Identities=14% Similarity=0.046 Sum_probs=94.9
Q ss_pred CCCEEEEEcC-----CcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeE
Q 015650 96 DHGCFAAGTD-----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIG 170 (403)
Q Consensus 96 d~~~l~~~~~-----~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~ 170 (403)
++++++.|+. +.+.+||..+.+-.....+. ...... .+....+.++++++..........+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP-TPRDSL-AACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS-SCCBSC-EEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC-ccccce-eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 6677777762 33888898877654444443 111111 2222344555555432111122578999988775433
Q ss_pred EEe--cCCceeEEEEecCceEEE--e---------cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCc
Q 015650 171 ELS--FRSEVRSVKLRRDRIIVV--L---------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (403)
Q Consensus 171 ~~~--~~~~i~~~~~~~~~~~~~--~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 237 (403)
.-. ....-.+++...+..+++ . -..+.+||+.+.+-...-..........+... ++.++++ .|..
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~-GG~~ 210 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAV-GGQN 210 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEE-CCEE
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEE-eCCC
Confidence 211 111222333333333444 1 24588999887643222111111111222222 3444444 3422
Q ss_pred ----cCeEEEEEccCCceeEEeec---CCceEEEEEcCCCCEEEEEeCC-----CcEEEEEEcCCCcE
Q 015650 238 ----KGQVRVEHYASKRTKFIMAH---DSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGTL 293 (403)
Q Consensus 238 ----d~~i~v~d~~~~~~~~~~~~---~~~i~~~~~sp~g~~l~s~~~d-----g~~i~iwd~~~~~~ 293 (403)
-..+.+||+.+..-..+... .....++.+ ++++++.|+.+ .. +.+||..+.+-
T Consensus 211 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-~~~yd~~~~~W 275 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGH-ILEYNTETDKW 275 (306)
T ss_dssp TTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCE-EEEEETTTTEE
T ss_pred CCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeee-EEEEcCCCCeE
Confidence 24688899888665444221 122233333 67788888754 34 88999887653
No 345
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.63 E-value=3 Score=35.51 Aligned_cols=196 Identities=16% Similarity=0.139 Sum_probs=91.0
Q ss_pred EcCCCCEEEEEcC-----C---c----EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCC--CCCCCCceE
Q 015650 93 FNQDHGCFAAGTD-----H---G----FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP--DPQYPLNKV 158 (403)
Q Consensus 93 ~s~d~~~l~~~~~-----~---~----i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~--d~~~~~~~i 158 (403)
...++++++.|+. . . +.+||..+.+-.....+. ....-.++....+.+++++|.. +.......+
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 119 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLP--SPRCLFGLGEALNSIYVVGGREIKDGERCLDSV 119 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBS--SCEESCEEEEETTEEEEECCEESSTTCCBCCCE
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCC--cchhceeEEEECCEEEEEeCCcCCCCCcccceE
Confidence 3457777777761 1 1 566777665543222222 1111112223345555555421 001112578
Q ss_pred EEEECCCCceeEE--EecCCceeEEEEecCceEEE--e------cCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCe
Q 015650 159 MIWDDHQSRCIGE--LSFRSEVRSVKLRRDRIIVV--L------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (403)
Q Consensus 159 ~iwd~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~--~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (403)
.+||..+.+-... +.....-.+++...+..+++ . -+.+.+||+.+.+-...-..........+... ++.
T Consensus 120 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~ 198 (315)
T 4asc_A 120 MCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGR 198 (315)
T ss_dssp EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTE
T ss_pred EEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCE
Confidence 9999887653222 11111122333333333444 1 13689999887543221111111111222222 345
Q ss_pred EEEEeeCCcc----CeEEEEEccCCceeEEeec---CCceEEEEEcCCCCEEEEEeCCC-------------cEEEEEEc
Q 015650 229 LVLVCPGLQK----GQVRVEHYASKRTKFIMAH---DSRIACFALTQDGQLLATSSTKG-------------TLVRIFNT 288 (403)
Q Consensus 229 ~~~~~~g~~d----~~i~v~d~~~~~~~~~~~~---~~~i~~~~~sp~g~~l~s~~~dg-------------~~i~iwd~ 288 (403)
++++ .|..+ ..+.+||+.+..-..+... ......+.+ ++++++.|+.++ ..|.+||+
T Consensus 199 iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~ 275 (315)
T 4asc_A 199 IIVA-AGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNE 275 (315)
T ss_dssp EEEE-EEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEET
T ss_pred EEEE-eccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecC
Confidence 4444 34222 2588889888665554321 111222333 667777777532 11678888
Q ss_pred CCCcEE
Q 015650 289 LDGTLL 294 (403)
Q Consensus 289 ~~~~~~ 294 (403)
.+.+-.
T Consensus 276 ~~~~W~ 281 (315)
T 4asc_A 276 EEKKWE 281 (315)
T ss_dssp TTTEEE
T ss_pred CCChhh
Confidence 776543
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.35 E-value=6.1 Score=38.17 Aligned_cols=191 Identities=9% Similarity=0.087 Sum_probs=94.5
Q ss_pred CCeEEEeeCCCCCCCCCceEEEEECCCCceeEEE-e-------cCCceeEEEEec-CceEEEe---------cCeEEEEE
Q 015650 139 CNILALVGGGPDPQYPLNKVMIWDDHQSRCIGEL-S-------FRSEVRSVKLRR-DRIIVVL---------EQKIFVYN 200 (403)
Q Consensus 139 ~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~-~-------~~~~i~~~~~~~-~~~~~~~---------d~~i~i~d 200 (403)
.+.+++++|... .....+.+||..+++....- . ....-.+++... ++.+++. -+.+.+||
T Consensus 397 ~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 397 GNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp SSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred CCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 344555544321 11257889998877543322 1 111123444442 5554442 13588999
Q ss_pred cCCcee--eeEeeccCCCceeEEEeeCCCeEEEEeeCCc-cCeEEEEEccCCceeEEee------cCCceEEEEEcCC-C
Q 015650 201 FADLKL--LHQIETIANPKGLCAVSQGVGSLVLVCPGLQ-KGQVRVEHYASKRTKFIMA------HDSRIACFALTQD-G 270 (403)
Q Consensus 201 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-d~~i~v~d~~~~~~~~~~~------~~~~i~~~~~sp~-g 270 (403)
+.+.+- +..+. .......+....++.+++. +|.. ++.+.+||..+..-..+.. ......++.+..+ +
T Consensus 475 ~~t~~W~~~~~~p--~~R~~h~~~~~~~~~iyv~-GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 475 MKTREWSMIKSLS--HTRFRHSACSLPDGNVLIL-GGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp TTTTEEEECCCCS--BCCBSCEEEECTTSCEEEE-CCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred CCCCcEEECCCCC--CCcccceEEEEcCCEEEEE-CCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence 887432 22221 1111222222224444444 3422 2268999998866554432 1122233555555 6
Q ss_pred CEEEEEeC--C-----CcEEEEEEcCCCcE-----EEEEecC--CCcccEEEEEeCCCCCEEEEEeCC--------CcEE
Q 015650 271 QLLATSST--K-----GTLVRIFNTLDGTL-----LQEVRRG--ADRAEIYSLAFSSNAQWLAVSSDK--------GTVH 328 (403)
Q Consensus 271 ~~l~s~~~--d-----g~~i~iwd~~~~~~-----~~~~~~~--~~~~~v~~l~~s~d~~~l~s~~~d--------g~v~ 328 (403)
++++.|+. + .. +.+||+.+.+. -..+... ........+.+ .++++++.|+.+ ..|.
T Consensus 552 ~iyv~GG~~~~~~~~~~~-v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDK-AIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp EEEEECCBCTTSSCBCCE-EEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEE
T ss_pred EEEEECCcCCCCCeeeCc-EEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCeEE
Confidence 67777776 2 34 88999988761 1222210 01111222222 336777777742 4578
Q ss_pred EEEeecCC
Q 015650 329 VFNLKVNS 336 (403)
Q Consensus 329 iwd~~~~~ 336 (403)
+||+.+.+
T Consensus 630 ~yd~~t~~ 637 (695)
T 2zwa_A 630 SLDPLSET 637 (695)
T ss_dssp EEETTTTE
T ss_pred EEECCCCe
Confidence 88877654
No 347
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.75 E-value=5.6 Score=33.86 Aligned_cols=195 Identities=12% Similarity=0.116 Sum_probs=90.4
Q ss_pred EcCCCCEEEEEcC-----C---c----EEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCC-CCCCCceEE
Q 015650 93 FNQDHGCFAAGTD-----H---G----FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPD-PQYPLNKVM 159 (403)
Q Consensus 93 ~s~d~~~l~~~~~-----~---~----i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-~~~~~~~i~ 159 (403)
...++.+++.|+. + . +.+||..+.+-.....+. ....-.++....+.+++++|... .......+.
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLP--SARCLFGLGEVDDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBS--SCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCC--ccccccceEEECCEEEEEcCccCCCCcccceEE
Confidence 3457788887762 1 1 556776655543222222 11111122223455666655321 001114688
Q ss_pred EEECCCCceeEEEecCC--ceeEEEEecCceEEEec---------CeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCe
Q 015650 160 IWDDHQSRCIGELSFRS--EVRSVKLRRDRIIVVLE---------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (403)
Q Consensus 160 iwd~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (403)
+||..+.+-...-.... .-.+++. .++.+++.. +.+.+||+.+.+-...-..........+... ++.
T Consensus 131 ~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~ 208 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGK 208 (318)
T ss_dssp EEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE
T ss_pred EEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCE
Confidence 88987765333211111 1112333 344444421 3589999887543222111111111112222 345
Q ss_pred EEEEeeCCcc----CeEEEEEccCCceeEEeec---CCceEEEEEcCCCCEEEEEeCC--------------CcEEEEEE
Q 015650 229 LVLVCPGLQK----GQVRVEHYASKRTKFIMAH---DSRIACFALTQDGQLLATSSTK--------------GTLVRIFN 287 (403)
Q Consensus 229 ~~~~~~g~~d----~~i~v~d~~~~~~~~~~~~---~~~i~~~~~sp~g~~l~s~~~d--------------g~~i~iwd 287 (403)
++++ .|..+ ..+.+||+.+..-..+... ......+.+ ++++++.|+.+ .. +.+||
T Consensus 209 iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~-v~~yd 284 (318)
T 2woz_A 209 IVIA-GGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQLESKEFAPTEVND-IWKYE 284 (318)
T ss_dssp EEEE-EEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC----CCBCCBCCC-EEEEE
T ss_pred EEEE-cCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCeeccCCCCceeccceeee-EEEEe
Confidence 4444 34221 3577889887665444321 111122222 66777777653 24 77888
Q ss_pred cCCCcEEE
Q 015650 288 TLDGTLLQ 295 (403)
Q Consensus 288 ~~~~~~~~ 295 (403)
+.+.+-..
T Consensus 285 ~~~~~W~~ 292 (318)
T 2woz_A 285 DDKKEWAG 292 (318)
T ss_dssp TTTTEEEE
T ss_pred CCCCEehh
Confidence 87765443
No 348
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.67 E-value=6.6 Score=34.55 Aligned_cols=151 Identities=9% Similarity=0.098 Sum_probs=91.8
Q ss_pred ceEEEEECCCC--ceeEEEec-------CCceeEEEEe---cC----ceEEE-e---cCeEEEEEcCCceeeeEeeccCC
Q 015650 156 NKVMIWDDHQS--RCIGELSF-------RSEVRSVKLR---RD----RIIVV-L---EQKIFVYNFADLKLLHQIETIAN 215 (403)
Q Consensus 156 ~~i~iwd~~~~--~~~~~~~~-------~~~i~~~~~~---~~----~~~~~-~---d~~i~i~d~~~~~~~~~~~~~~~ 215 (403)
-+|.+||+.++ +.++.+.. ...+..+.+. ++ +.++. + ...|.+||+.+++.-+.+...
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~-- 200 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT-- 200 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG--
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC--
Confidence 57999999999 99998873 2346778877 22 23333 3 568999999998876655211
Q ss_pred CceeEEEeeCCCeEEEEeeCCccCeEEEEEccCCceeEEeecCCceEEEEEcCC----CCEEEEEeCCCcEEEEEEcCC-
Q 015650 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQD----GQLLATSSTKGTLVRIFNTLD- 290 (403)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~----g~~l~s~~~dg~~i~iwd~~~- 290 (403)
+.|+... .+... |.-.- -...+..|+++|+ ++.|+.....+. ++|.+.+
T Consensus 201 ------~~pd~~~-~~~i~----G~~~~-------------~~~Gi~gIaLsp~~~~~~~~LYf~plss~--~ly~V~T~ 254 (381)
T 3q6k_A 201 ------FKAERPT-KFDYG----GKEYE-------------FKAGIFGITLGDRDSEGNRPAYYLAGSAI--KVYSVNTK 254 (381)
T ss_dssp ------GSCCSCE-EEEET----TEEEE-------------ECCCEEEEEECCCCTTSCCEEEEEESSCS--EEEEEEHH
T ss_pred ------CccccCc-ceEEC----CEEeE-------------eccCceEEEecCCcCCCCeEEEEEECCCC--cEEEEEHH
Confidence 2344211 22221 22111 1345899999998 888888777764 5665532
Q ss_pred ----C---cEEEEEecCCCcccEEEEEeC-CCCCEEEEEeCCCcEEEEEeec
Q 015650 291 ----G---TLLQEVRRGADRAEIYSLAFS-SNAQWLAVSSDKGTVHVFNLKV 334 (403)
Q Consensus 291 ----~---~~~~~~~~~~~~~~v~~l~~s-~d~~~l~s~~~dg~v~iwd~~~ 334 (403)
. ..++.+-...-...-..++.. .+|.++++--....|..|+..+
T Consensus 255 ~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 255 ELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp HHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred HhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 1 122222211001234456775 6777777777888999999875
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.78 E-value=10 Score=35.18 Aligned_cols=72 Identities=10% Similarity=0.051 Sum_probs=51.8
Q ss_pred ceEEEEEcCCCCEEEEEeC-CCcEEEEEEcCCC------c-------EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCC
Q 015650 260 RIACFALTQDGQLLATSST-KGTLVRIFNTLDG------T-------LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG 325 (403)
Q Consensus 260 ~i~~~~~sp~g~~l~s~~~-dg~~i~iwd~~~~------~-------~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg 325 (403)
....+.++|||++++.++. +.+ +.|+|++.. + .....+. .-.....+|.++|....+.--|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLspt-vtV~d~~k~~~~~~~k~~~~~~~~~ae~e~---GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPT-CSMIAIDKLPDLFAGKLADPRDVIVGEPEL---GLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSB-EEEEEGGGHHHHHTTCCSCGGGGEEECCBC---CSCEEEEEECSSSEEEEEETTTT
T ss_pred CCcceeeCCCCCEEEEcCCCCCe-EEEEEeehhhhhhhccccCcccceEeeccC---CCcccEEEECCCCceEeeeeecc
Confidence 3467889999999988776 556 999998731 1 1233332 24578899999995555555899
Q ss_pred cEEEEEeecC
Q 015650 326 TVHVFNLKVN 335 (403)
Q Consensus 326 ~v~iwd~~~~ 335 (403)
.|.-|++...
T Consensus 400 qvvkWni~~a 409 (638)
T 3sbq_A 400 QVVKWNMEEA 409 (638)
T ss_dssp EEEEEEHHHH
T ss_pred eEEEEeccHH
Confidence 9999999764
No 350
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.45 E-value=11 Score=35.34 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=42.3
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEE
Q 015650 261 IACFALTQDGQLLATSSTK------------GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS 321 (403)
Q Consensus 261 i~~~~~sp~g~~l~s~~~d------------g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~ 321 (403)
.-.|+|+|.|++++.-..+ .. +.+.+..+++..+-+... ....++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~-~~~~~~~~g~~~rf~~~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQ-MLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCE-EEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccce-EEEEeCCCCeEEEEEeCC-CCccCcCeeECCCCCEEEEE
Confidence 4678999999966643221 23 556676778877666654 55789999999999887664
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.34 E-value=11 Score=33.25 Aligned_cols=59 Identities=7% Similarity=0.068 Sum_probs=31.4
Q ss_pred ceEEEEEcCC-CCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCc---ccEEEEEeCCC-CCEEEEE
Q 015650 260 RIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR---AEIYSLAFSSN-AQWLAVS 321 (403)
Q Consensus 260 ~i~~~~~sp~-g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~s~d-~~~l~s~ 321 (403)
.+.+|.++|+ ...|+.+... . |...+ ..++.-..+...... ..+..+.++|. ...|.++
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~-g-l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHC-G-IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETT-E-EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred ceeEEEECCCCCCEEEEEcCC-e-EEEeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 4889999985 3566666644 4 55554 234433333221111 24567888763 3344444
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.81 E-value=8.9 Score=34.86 Aligned_cols=105 Identities=14% Similarity=0.092 Sum_probs=59.3
Q ss_pred ceeEEEeeCCC-eEEEEeeCCccCeEEEEEccCCc----eeEEe---e------cCCceEEEEEcCC----CCEEEEEeC
Q 015650 217 KGLCAVSQGVG-SLVLVCPGLQKGQVRVEHYASKR----TKFIM---A------HDSRIACFALTQD----GQLLATSST 278 (403)
Q Consensus 217 ~~~~~~~~~~~-~~~~~~~g~~d~~i~v~d~~~~~----~~~~~---~------~~~~i~~~~~sp~----g~~l~s~~~ 278 (403)
-..+++.|+++ .++++ ...|.|++++..... +..+. . .......|+|+|+ +.+.++-+.
T Consensus 16 P~~~a~~pdG~~rl~V~---er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFIL---EKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp EEEEECCSSSSCCEEEE---ETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred ceEEEECCCCCeEEEEE---eCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 36778888886 45544 367899998754321 11111 1 1356789999996 444333222
Q ss_pred --C----------CcEEEEEEcCC----------CcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCC
Q 015650 279 --K----------GTLVRIFNTLD----------GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG 325 (403)
Q Consensus 279 --d----------g~~i~iwd~~~----------~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg 325 (403)
+ .. |.-|.+.. .+.+..+...........|+|.|||.+.++.++.+
T Consensus 93 ~~~~~~~~~~~~~~~-v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 93 NQERWAIGPHDHILR-VVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCCSSCSSSSCEEEE-EEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCcccCCcccceE-EEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13 54465532 23333433211223468999999998777766543
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.09 E-value=11 Score=34.21 Aligned_cols=55 Identities=22% Similarity=0.262 Sum_probs=34.3
Q ss_pred CceEEEEEcCCCC-EEEEEeCCCcEEEEEEcCCC---cEEEEEecC-------CCcccEEEEEeCCC
Q 015650 259 SRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDG---TLLQEVRRG-------ADRAEIYSLAFSSN 314 (403)
Q Consensus 259 ~~i~~~~~sp~g~-~l~s~~~dg~~i~iwd~~~~---~~~~~~~~~-------~~~~~v~~l~~s~d 314 (403)
.....|+|.|||. .|+.+...|. |++++.... +.+..+... ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~-i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGY-VKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTE-EEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCce-EEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3457899999995 3445567888 999974322 122222110 01356889999996
No 354
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.55 E-value=11 Score=37.82 Aligned_cols=38 Identities=8% Similarity=0.146 Sum_probs=33.5
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 260 RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 260 ~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
.+.+++..++..++++-+.|++ +|||++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~-LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCE-EEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCE-EEEEECCCCCeEeeec
Confidence 4677778888899999999999 9999999999988764
No 355
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=81.21 E-value=23 Score=29.58 Aligned_cols=184 Identities=15% Similarity=0.067 Sum_probs=95.4
Q ss_pred eeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEE-EecCCceeEEEEecCceEEEecCeEEEEEcCCceeee
Q 015650 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGE-LSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLH 208 (403)
Q Consensus 130 ~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~ 208 (403)
..|..++......+++. + |.|+.|-......+.. ......|..++.-.+..+++.+|.|+.|-......+-
T Consensus 63 ~~i~~ia~G~~hs~~l~---~-----G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~al~~G~v~~wG~n~~gqlg 134 (282)
T 3qhy_B 63 SGVDAIAAGNYHSLALK---D-----GEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYALKDGKVIAWGDDSDGQTT 134 (282)
T ss_dssp SCCCEEEECSSEEEEEE---T-----TEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEEEETTEEEEEECCTTSTTS
T ss_pred CCEEEEEeCCCEEEEEE---C-----CEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEEEeCCeEEEecCCCCCcCC
Confidence 35666666555555552 4 8999997544221111 1124568888887776655569999999865422111
Q ss_pred EeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccC-CceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEE
Q 015650 209 QIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (403)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~-~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd 287 (403)
.-..... ....++......++ . .+|.|..|-... +++..-......|..++.-... .++. .||. |+.|-
T Consensus 135 ~~~~~~~--~i~~i~~G~~~~~~-l---~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~-v~~wG 204 (282)
T 3qhy_B 135 VPAEAQS--GVTALDGGVYTALA-V---KNGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGK-VIAWG 204 (282)
T ss_dssp CCGGGGS--SEEEEEECSSEEEE-E---ETTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTE-EEEEE
T ss_pred CCccCCC--CeEEEEcccCEEEE-E---ECCEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCe-EEEEE
Confidence 1101112 23444444444333 2 268888886554 2221111123456666654332 2333 5888 99996
Q ss_pred cCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 288 TLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
....-.+. +... ....|..|+-...... +. . ||.|+.|-.....
T Consensus 205 ~n~~gqlg-~p~~-~~~~v~~i~~G~~h~~-al-~-~g~v~~wG~n~~g 248 (282)
T 3qhy_B 205 DNRYKQTT-VPTE-ALSGVSAIASGEWYSL-AL-K-NGKVIAWGSSRTA 248 (282)
T ss_dssp CCTTSTTC-CCGG-GGSSCCEEEECSSCEE-EE-E-TTEEEEESTTCCC
T ss_pred CCCCCCCC-CCcc-cCCCceEEEcCCCEEE-EE-E-CCEEEEecCCCCc
Confidence 54321111 1111 1245777776554333 33 3 9999999766544
No 356
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=79.69 E-value=46 Score=32.15 Aligned_cols=177 Identities=8% Similarity=0.016 Sum_probs=91.9
Q ss_pred ceEEEEECCCCceeEE-EecC--C------ceeEEEEecCceEEE-e------------cCeEEEEEcCCc--eeeeEee
Q 015650 156 NKVMIWDDHQSRCIGE-LSFR--S------EVRSVKLRRDRIIVV-L------------EQKIFVYNFADL--KLLHQIE 211 (403)
Q Consensus 156 ~~i~iwd~~~~~~~~~-~~~~--~------~i~~~~~~~~~~~~~-~------------d~~i~i~d~~~~--~~~~~~~ 211 (403)
..++++|+.+++.+.. +... . ....++|..+..+++ . ..+|+.|.+-+. +-...+.
T Consensus 156 ~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~ 235 (711)
T 4hvt_A 156 MFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFE 235 (711)
T ss_dssp EEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEE
T ss_pred eEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEec
Confidence 6899999999987632 1100 0 113347765444444 2 246899987663 2233344
Q ss_pred ccCCCce-eEEEeeCCCe----EEEEee-CCccCeEEEEEccC--CceeEEeecCCceEEEEEcCCCCEEEEE-------
Q 015650 212 TIANPKG-LCAVSQGVGS----LVLVCP-GLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDGQLLATS------- 276 (403)
Q Consensus 212 ~~~~~~~-~~~~~~~~~~----~~~~~~-g~~d~~i~v~d~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~s~------- 276 (403)
.....+. ....+.++.. +++..+ +.....+.+.+... +....+...... .+..+.++.+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 313 (711)
T 4hvt_A 236 VPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDA--TLQGSFKEYVFWLLRSDWKFK 313 (711)
T ss_dssp CCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTC--EEEEEETTEEEEECSSCEEET
T ss_pred cCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcc--eEeeeECCEEEEEECcccccc
Confidence 4333332 2334556554 233322 22234566666553 333333222221 12334466555532
Q ss_pred ---eCCCcEEEEEEcCCCc-------EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCc--EEEEEeecCC
Q 015650 277 ---STKGTLVRIFNTLDGT-------LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGT--VHVFNLKVNS 336 (403)
Q Consensus 277 ---~~dg~~i~iwd~~~~~-------~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~--v~iwd~~~~~ 336 (403)
...+. |.+.|+.++. ..+.+-.+.....+..+.|..+ .++++...++. |+++++.+++
T Consensus 314 ~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 314 SHNIKAGS-LVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp TEEECTTC-EEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTE
T ss_pred cccCCCCe-EEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCc
Confidence 13566 8889987631 2233222223457889999876 56677777765 6677766653
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=79.24 E-value=16 Score=35.13 Aligned_cols=73 Identities=21% Similarity=0.204 Sum_probs=46.9
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCCc-----------ccEEEEEeCCCCCEEEEEe--CCC
Q 015650 259 SRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR-----------AEIYSLAFSSNAQWLAVSS--DKG 325 (403)
Q Consensus 259 ~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~-----------~~v~~l~~s~d~~~l~s~~--~dg 325 (403)
..|.++.+ +..+|++-+.|.+ +|+||+++++++.+....... ..-.-+.. -+.++++=. .+|
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~-LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl--~~~~lv~y~P~~~G 296 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCH-LKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSL--YNNTLVTLLPLENG 296 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCE-EEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEE--SSSEEEEEETTTTC
T ss_pred ceEEEecc--CCcEEEEEEcCCe-EEEEEcCCCceEEeeccccCccccccccCcccCcchhHhh--eeeEEEEEecCCCC
Confidence 34666655 5789999999999 999999999998887652111 00000111 124555443 678
Q ss_pred cEEEEEeecCC
Q 015650 326 TVHVFNLKVNS 336 (403)
Q Consensus 326 ~v~iwd~~~~~ 336 (403)
..++|.+....
T Consensus 297 ~Fk~~~l~~~~ 307 (729)
T 3f7f_A 297 LFQMGTLLVDS 307 (729)
T ss_dssp EEEEEEEEC--
T ss_pred eEEEEEEEEcC
Confidence 99999997654
No 358
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=78.29 E-value=14 Score=34.45 Aligned_cols=60 Identities=13% Similarity=0.173 Sum_probs=42.3
Q ss_pred ceEEEEEcCCCCEEEEEeC------------CCcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCCEEEEE
Q 015650 260 RIACFALTQDGQLLATSST------------KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS 321 (403)
Q Consensus 260 ~i~~~~~sp~g~~l~s~~~------------dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~ 321 (403)
....|.|+++|.+.+.... ... |..++..+++....+... ....++.++|+||++.|.+.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~-v~~~dp~tGel~~fl~~P-~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQ-MLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCE-EEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCce-EEEEeCCCCeEEEEEeCC-CCccccCCEECCCCCEEEEE
Confidence 4578999999987763211 114 677777778876655532 33679999999999988766
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=76.60 E-value=14 Score=37.22 Aligned_cols=38 Identities=24% Similarity=0.196 Sum_probs=31.9
Q ss_pred ccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCCCCCC
Q 015650 304 AEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARS 341 (403)
Q Consensus 304 ~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~~~~~ 341 (403)
..+.+++..++..++++-+.|+++|||++.+++.+.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35778888888899999999999999999998765443
No 360
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=65.04 E-value=1e+02 Score=29.73 Aligned_cols=240 Identities=11% Similarity=0.074 Sum_probs=118.8
Q ss_pred CeEEEE-EcCCCCEEEEEc-CCc-----EEEEEcCCCeeEEEEecccCcce------eEEEEeeeCCeEEEeeCCCCCC-
Q 015650 87 TLLHIS-FNQDHGCFAAGT-DHG-----FRIYNCDPFREIFRRDFERGGGI------GVVEMLFRCNILALVGGGPDPQ- 152 (403)
Q Consensus 87 ~i~~i~-~s~d~~~l~~~~-~~~-----i~iw~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~s~~~d~~- 152 (403)
....+. ++||+++++.+- .+| ++++|+.+++.+- -.+...... ....+.|..+..++++....+.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~-~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK-NGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT-TCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTC
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC-CCcccccccccccccccceeeEECCCEEEEEeCCCCCC
Confidence 344556 899999887763 222 8999998876541 111100000 1112234333333333211100
Q ss_pred ----CCCceEEEEECCCCc--eeEEEe-cCCc-eeEEEEecCce-----EEEe------cCeEEEEEcCC--ceeeeEee
Q 015650 153 ----YPLNKVMIWDDHQSR--CIGELS-FRSE-VRSVKLRRDRI-----IVVL------EQKIFVYNFAD--LKLLHQIE 211 (403)
Q Consensus 153 ----~~~~~i~iwd~~~~~--~~~~~~-~~~~-i~~~~~~~~~~-----~~~~------d~~i~i~d~~~--~~~~~~~~ 211 (403)
--+..|+.|.+-+.. -...+. .... -.....++++. .++. ...+++.+... ++. ..+.
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~ 287 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKIN 287 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECC
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEee
Confidence 012679999876653 233344 1222 22344455544 2331 24577777653 332 2232
Q ss_pred ccCCCceeEEEeeCCCeEEEEeeC--------CccCeEEEEEccCC--------ceeEEee--cCCceEEEEEcCCCCEE
Q 015650 212 TIANPKGLCAVSQGVGSLVLVCPG--------LQKGQVRVEHYASK--------RTKFIMA--HDSRIACFALTQDGQLL 273 (403)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~g--------~~d~~i~v~d~~~~--------~~~~~~~--~~~~i~~~~~sp~g~~l 273 (403)
.... ..+.... ++.+++.+.. ...+.|.+.++... ..+.+.. ....+..+.+..+ .++
T Consensus 288 ~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 288 MPSD--ATLQGSF-KEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp SCTT--CEEEEEE-TTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred cCCc--ceEeeeE-CCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 2121 1222233 4455543311 13577888998763 2233222 3446778888866 566
Q ss_pred EEEeCCCc-EEEEEEcCCCc-EEEE-EecCCCcccEEEEEeCCCCCEE-EEEe---CCCcEEEEEee
Q 015650 274 ATSSTKGT-LVRIFNTLDGT-LLQE-VRRGADRAEIYSLAFSSNAQWL-AVSS---DKGTVHVFNLK 333 (403)
Q Consensus 274 ~s~~~dg~-~i~iwd~~~~~-~~~~-~~~~~~~~~v~~l~~s~d~~~l-~s~~---~dg~v~iwd~~ 333 (403)
++...++. .|.++|+.+++ .+.. +... ..+.+..+..++++..+ ++.+ .-+.++.+|+.
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp-~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLP-YQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCC-STTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCC-CCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 66666663 16777776664 2233 3221 12457777777777644 3333 34567777765
No 361
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=62.09 E-value=80 Score=27.51 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=35.1
Q ss_pred CceEEEEEcCC-CCEEEEEeCCCcEEEEEEcCCCcEEEEEecCCC-----------cccEEEEEeCCC-CCEEEEEeCCC
Q 015650 259 SRIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQEVRRGAD-----------RAEIYSLAFSSN-AQWLAVSSDKG 325 (403)
Q Consensus 259 ~~i~~~~~sp~-g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~-----------~~~v~~l~~s~d-~~~l~s~~~dg 325 (403)
..+.+|.++|. ...|+.+..++. |...+ ..++.-..+..... ...+.+|.+.|+ ...|..+...+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~gg-l~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGG-VFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBE-EEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred CceeEEEECCCCCCEEEEEECCCC-EEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 35789999883 444555555555 55443 22332222221000 124889999986 35666666544
No 362
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=61.21 E-value=28 Score=33.20 Aligned_cols=58 Identities=21% Similarity=0.344 Sum_probs=38.4
Q ss_pred EEEEEeCCCcEEEEEEcCCCc-------EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEE
Q 015650 272 LLATSSTKGTLVRIFNTLDGT-------LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHV 329 (403)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~~-------~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~i 329 (403)
.+..|+.+|..+++....... .+.++.......+|..|.++++.++|.+++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 566788999845565433221 2334443335578999999999999999988875544
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=60.08 E-value=8.1 Score=39.80 Aligned_cols=38 Identities=8% Similarity=0.146 Sum_probs=32.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 015650 260 RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (403)
Q Consensus 260 ~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (403)
.+.+++..++..++++-+.|++ +|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~-LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCE-EEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCE-EEEEECCCCCeEEeec
Confidence 3455666778899999999999 9999999999988765
No 364
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=57.47 E-value=81 Score=26.10 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=48.7
Q ss_pred CCceEEEEEcC-CCCEEEEEeCCCcEEEEEEcCCCc------EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEE
Q 015650 258 DSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGT------LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVF 330 (403)
Q Consensus 258 ~~~i~~~~~sp-~g~~l~s~~~dg~~i~iwd~~~~~------~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iw 330 (403)
...|..+.... +..+++..+.+|. ++-..+.... ....+. ....+..+........|+..+..|.++.+
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~-iKr~~l~~~~~~~~G~~~i~lk---egD~l~~~~~~~~~~~ill~T~~G~~~r~ 142 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGY-VKKIPLAEFEYKAQGMPIIKLT---EGDEVVSIASSVDETHILLFTKKGRVARF 142 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSE-EEEEEGGGTTTCSTTEECSCCC---TTCCEEEEEECCSSCEEEEEETTSEEEEE
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCE-EEEEEHHHhhhhcCCeEEEecC---CCCEEEEEEEeCCCCEEEEEECCCEEEEE
Confidence 44565554321 4678999999999 9988865432 111222 22456666666566788888999999988
Q ss_pred EeecCC
Q 015650 331 NLKVNS 336 (403)
Q Consensus 331 d~~~~~ 336 (403)
+...-.
T Consensus 143 ~~~eip 148 (276)
T 3no0_A 143 SVREVP 148 (276)
T ss_dssp EGGGSC
T ss_pred EhhhCC
Confidence 876543
No 365
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=56.67 E-value=84 Score=26.03 Aligned_cols=181 Identities=14% Similarity=0.067 Sum_probs=92.8
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEcCCCeeEEEEecccCcceeEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCC
Q 015650 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (403)
Q Consensus 87 ~i~~i~~s~d~~~l~~~~~~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~ 166 (403)
.|..|+...+-. ++. .++.|..|-.....++- ... .-...|..++...+..++++ . |.|+.|-....
T Consensus 64 ~i~~ia~G~~hs-~~l-~~G~v~~wG~n~~Gqlg-~P~--~~~~~v~~ia~G~~hs~al~-~-------G~v~~wG~n~~ 130 (282)
T 3qhy_B 64 GVDAIAAGNYHS-LAL-KDGEVIAWGGNEDGQTT-VPA--EARSGVDAIAAGAWASYALK-D-------GKVIAWGDDSD 130 (282)
T ss_dssp CCCEEEECSSEE-EEE-ETTEEEEEECCTTSTTC-CCG--GGSSSEEEEEEETTEEEEEE-T-------TEEEEEECCTT
T ss_pred CEEEEEeCCCEE-EEE-ECCEEEEeeCCCCCCCC-CCc--ccCCCeEEEECcCCEEEEEe-C-------CeEEEecCCCC
Confidence 455555543322 222 35557777654332211 001 12246777777777666666 3 89999975442
Q ss_pred -ceeEEEecCCceeEEEEecCceEEEecCeEEEEEcCCceeeeEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEE
Q 015650 167 -RCIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEH 245 (403)
Q Consensus 167 -~~~~~~~~~~~i~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d 245 (403)
++-........|..++.-.+..++..|+.|+.|-......+..-..... ....++....+.+ +. .+|.|+.|=
T Consensus 131 gqlg~~~~~~~~i~~i~~G~~~~~~l~~G~v~~wG~n~~gqlg~p~~~~~--~v~~i~~G~~hs~-al---~~G~v~~wG 204 (282)
T 3qhy_B 131 GQTTVPAEAQSGVTALDGGVYTALAVKNGGVIAWGDNYFGQTTVPAEAQS--GVDDVAGGIFHSL-AL---KDGKVIAWG 204 (282)
T ss_dssp STTSCCGGGGSSEEEEEECSSEEEEEETTEEEEEECCTTSTTSCCGGGGS--SEEEEEECSSEEE-EE---ETTEEEEEE
T ss_pred CcCCCCccCCCCeEEEEcccCEEEEEECCEEEEecCCCCCCCCCceecCC--CeEEEEecCCEEE-EE---ECCeEEEEE
Confidence 2211112345677887777666666799999998654222111000111 2334444333332 22 478888886
Q ss_pred ccC-CceeEEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCC
Q 015650 246 YAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (403)
Q Consensus 246 ~~~-~~~~~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~ 290 (403)
... +++-.-......|..++-.... .++. . ||. |+.|-...
T Consensus 205 ~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al-~-~g~-v~~wG~n~ 246 (282)
T 3qhy_B 205 DNRYKQTTVPTEALSGVSAIASGEWY-SLAL-K-NGK-VIAWGSSR 246 (282)
T ss_dssp CCTTSTTCCCGGGGSSCCEEEECSSC-EEEE-E-TTE-EEEESTTC
T ss_pred CCCCCCCCCCcccCCCceEEEcCCCE-EEEE-E-CCE-EEEecCCC
Confidence 544 2221111122346666654333 3333 3 888 99996543
No 366
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=55.31 E-value=27 Score=32.01 Aligned_cols=69 Identities=22% Similarity=0.374 Sum_probs=42.8
Q ss_pred eEEEEEcC----CCC--EEEEEeCCCcEEEEEEcCCCc-------EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcE
Q 015650 261 IACFALTQ----DGQ--LLATSSTKGTLVRIFNTLDGT-------LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTV 327 (403)
Q Consensus 261 i~~~~~sp----~g~--~l~s~~~dg~~i~iwd~~~~~-------~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v 327 (403)
.++|+... ++. .+..|+.+|..+++.-...+. .+.++.......+|..|.++++.++|.+++.++.+
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~ 485 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 485 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEE
Confidence 45555542 233 466788999844555433321 23344432234689999999999999999988866
Q ss_pred EE
Q 015650 328 HV 329 (403)
Q Consensus 328 ~i 329 (403)
+|
T Consensus 486 ~v 487 (495)
T 1q47_A 486 QL 487 (495)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=55.14 E-value=1.1e+02 Score=26.84 Aligned_cols=206 Identities=8% Similarity=0.055 Sum_probs=115.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEc---C----------C---cEEEEEcCCC--eeEEEEeccc---CcceeEEEEeee---C
Q 015650 84 PPPTLLHISFNQDHGCFAAGT---D----------H---GFRIYNCDPF--REIFRRDFER---GGGIGVVEMLFR---C 139 (403)
Q Consensus 84 ~~~~i~~i~~s~d~~~l~~~~---~----------~---~i~iw~~~~~--~~~~~~~~~~---~~~~~v~~~~~~---~ 139 (403)
+--.|..+...+.+++-+.-. + . .|.+||+.+. +.+....+.. .....+..+.+. +
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 345788899988887755422 1 1 2889999998 7765555531 123456666666 1
Q ss_pred -----CeEEEeeCCCCCCCCCceEEEEECCCCceeEEEecCCceeEEEEecCc-eEEEecCeEEEEEcCCceeeeEeecc
Q 015650 140 -----NILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR-IIVVLEQKIFVYNFADLKLLHQIETI 213 (403)
Q Consensus 140 -----~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~d~~i~i~d~~~~~~~~~~~~~ 213 (403)
++.+.++-... +.|.++|+.+++..+.+. .. |.|+. ..+..+|.-..|
T Consensus 165 ~~~c~~~~aYItD~~~-----~gLIVydl~~~~swRv~~-~~------~~pd~~~~~~i~G~~~~~-------------- 218 (381)
T 3q6k_A 165 KGDCSETFVYITNFLR-----GALFIYDHKKQDSWNVTH-PT------FKAERPTKFDYGGKEYEF-------------- 218 (381)
T ss_dssp TTTSCSEEEEEEETTT-----TEEEEEETTTTEEEEEEC-GG------GSCCSCEEEEETTEEEEE--------------
T ss_pred CCCCCccEEEEEcCCC-----CcEEEEECCCCcEEEEcc-CC------CccccCcceEECCEEeEe--------------
Confidence 45555655555 789999999998776553 21 23431 111233332211
Q ss_pred CCCceeEEEeeC----CCeEEEEeeCCccCeEEEEEccC---------CceeEEeecC---CceEEEEEc-CCCCEEEEE
Q 015650 214 ANPKGLCAVSQG----VGSLVLVCPGLQKGQVRVEHYAS---------KRTKFIMAHD---SRIACFALT-QDGQLLATS 276 (403)
Q Consensus 214 ~~~~~~~~~~~~----~~~~~~~~~g~~d~~i~v~d~~~---------~~~~~~~~~~---~~i~~~~~s-p~g~~l~s~ 276 (403)
...+..++++|+ ++.+|+..-. . -++|.+.+ ..++.+ +.. ..-..++++ .+|.++++-
T Consensus 219 ~~Gi~gIaLsp~~~~~~~~LYf~pls--s--~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~ 293 (381)
T 3q6k_A 219 KAGIFGITLGDRDSEGNRPAYYLAGS--A--IKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAE 293 (381)
T ss_dssp CCCEEEEEECCCCTTSCCEEEEEESS--C--SEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEE
T ss_pred ccCceEEEecCCcCCCCeEEEEEECC--C--CcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEe
Confidence 245677888887 5666655411 1 23343332 112222 222 233456775 577777766
Q ss_pred eCCCcEEEEEEcCC-C---cEEEEEecCCCcccEEEEEeCCCCCEEEEE
Q 015650 277 STKGTLVRIFNTLD-G---TLLQEVRRGADRAEIYSLAFSSNAQWLAVS 321 (403)
Q Consensus 277 ~~dg~~i~iwd~~~-~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~s~ 321 (403)
-.... |..|+..+ . +....+.....-..+..+.+..+|.+.+..
T Consensus 294 ~~~~a-I~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 294 ANTKQ-VSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp SSSSE-EEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred ccCCe-EEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 67777 99999765 1 222333321122356777777666655444
No 368
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=47.48 E-value=48 Score=34.10 Aligned_cols=36 Identities=22% Similarity=0.360 Sum_probs=26.7
Q ss_pred EEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCCceeEEEe
Q 015650 133 VEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS 173 (403)
Q Consensus 133 ~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~~~~~~~~ 173 (403)
.++....+..++++-+.| +++|||++.+++++.+..
T Consensus 241 vs~~~~~~~~~lftL~~D-----~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLD-----YKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp SCCEEETTTTEEEEEBTT-----CEEEEEETTTTEEEEEEE
T ss_pred EEeeccCCccEEEEEeCC-----CEEEEEECCCCCeEEeec
Confidence 344444555566677777 999999999999988765
No 369
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=45.62 E-value=67 Score=29.97 Aligned_cols=57 Identities=5% Similarity=-0.032 Sum_probs=41.0
Q ss_pred ceeEEEEecCceEEE-ecC--------------eEEEEEcCCceeeeEeecc-CCCceeEEEeeCCCeEEEEe
Q 015650 177 EVRSVKLRRDRIIVV-LEQ--------------KIFVYNFADLKLLHQIETI-ANPKGLCAVSQGVGSLVLVC 233 (403)
Q Consensus 177 ~i~~~~~~~~~~~~~-~d~--------------~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 233 (403)
....|.|.++|.+.+ .|+ .++.++..+++....+... .....-++|+||++.++++.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 345789999988777 654 5777777777765555432 23467899999999888876
No 370
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=44.74 E-value=1.6e+02 Score=28.73 Aligned_cols=63 Identities=13% Similarity=0.091 Sum_probs=38.2
Q ss_pred CCceEEEEEcCC-CCEEEEEeCCCcEEEEEEcCCCcEEEEEecCC-----CcccEEEEEeCCCC-CEEEEEe
Q 015650 258 DSRIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA-----DRAEIYSLAFSSNA-QWLAVSS 322 (403)
Q Consensus 258 ~~~i~~~~~sp~-g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-----~~~~v~~l~~s~d~-~~l~s~~ 322 (403)
.+.|.+|+++|. ...+++++..+. |...+ ..|+.-..+.... ....|.+|+++|.. ..++.+.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~gg-v~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGG-AYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSC-EEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCC-EEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 457999999985 456666777777 66554 3454433333211 12369999999843 4444443
No 371
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=43.53 E-value=1.3e+02 Score=29.09 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=27.0
Q ss_pred CCeEEEEEcCCCCEEEEEc-CCcEEEEEcCCCeeEEEEec
Q 015650 86 PTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDF 124 (403)
Q Consensus 86 ~~i~~i~~s~d~~~l~~~~-~~~i~iw~~~~~~~~~~~~~ 124 (403)
..|.++.+. ..+|++-+ |+.+|+|++.+++.+....+
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 456766653 55665555 77899999999988776666
No 372
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=41.25 E-value=1.7e+02 Score=24.96 Aligned_cols=106 Identities=17% Similarity=0.159 Sum_probs=63.0
Q ss_pred CCeEEEEeeCCccCeEEEEEccCCc------ee--EEeecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcC--CCcE--
Q 015650 226 VGSLVLVCPGLQKGQVRVEHYASKR------TK--FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL--DGTL-- 293 (403)
Q Consensus 226 ~~~~~~~~~g~~d~~i~v~d~~~~~------~~--~~~~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~--~~~~-- 293 (403)
...+++++ .+|.++...+..-. .. .+.. ...+..+........|+..+..|. +..+... .-..
T Consensus 109 e~~~v~~T---~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~-~~rf~~~~~eip~~g 183 (327)
T 3uc1_A 109 APYLVLAT---RNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQ-SIRFSATDEALRPMG 183 (327)
T ss_dssp SSEEEEEE---TTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSE-EEEEECCTTTSCCCC
T ss_pred CCEEEEEc---CCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCe-EEEEECcccccCcCC
Confidence 34444544 78999988765411 11 1222 344555544445567778888898 7777665 2111
Q ss_pred -----EEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCCC
Q 015650 294 -----LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 294 -----~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
+..+... ....|.++..-+++.+|+..+..|.++.-.+.....
T Consensus 184 r~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~ 231 (327)
T 3uc1_A 184 RATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPV 231 (327)
T ss_dssp TTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCB
T ss_pred cCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccc
Confidence 1111111 234677776666677899999999999988876553
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=37.70 E-value=1.1e+02 Score=28.60 Aligned_cols=57 Identities=12% Similarity=0.115 Sum_probs=36.1
Q ss_pred eEEEeeCCCeEEEEeeCC----------ccCeEEEEEccCCceeEEe-e-cCCceEEEEEcCCCCEEEEE
Q 015650 219 LCAVSQGVGSLVLVCPGL----------QKGQVRVEHYASKRTKFIM-A-HDSRIACFALTQDGQLLATS 276 (403)
Q Consensus 219 ~~~~~~~~~~~~~~~~g~----------~d~~i~v~d~~~~~~~~~~-~-~~~~i~~~~~sp~g~~l~s~ 276 (403)
-++|++.++ +++..-++ .+..+.+.+...+++..+- . ....++.++|+||++.|+..
T Consensus 480 NL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 480 GLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred ceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 478888876 55554221 1124555566666665543 2 45689999999999888654
No 374
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=37.18 E-value=2.9e+02 Score=26.61 Aligned_cols=75 Identities=5% Similarity=0.008 Sum_probs=42.6
Q ss_pred ceEEEEEcCCC-CEEEEEeCCCcEEEEEEcCCCcEEEEEecCCC-----cccEEEEEeCCC-CCEEEEEeCC-------C
Q 015650 260 RIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQEVRRGAD-----RAEIYSLAFSSN-AQWLAVSSDK-------G 325 (403)
Q Consensus 260 ~i~~~~~sp~g-~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~-----~~~v~~l~~s~d-~~~l~s~~~d-------g 325 (403)
.|..|+++|.. ..++.+...+. |..++ ..++.-..+..... ...|.+|+++|. ...|+.+... +
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~gg-v~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGG-AYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSC-EEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred eeeEEEECCCCCCEEEEEecCCc-EEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 78999999863 45666776677 76665 33444333332111 246999999983 3344433321 1
Q ss_pred cEEEEEeecCC
Q 015650 326 TVHVFNLKVNS 336 (403)
Q Consensus 326 ~v~iwd~~~~~ 336 (403)
...||.-..+.
T Consensus 102 ~~~l~~S~DgG 112 (737)
T 2cn3_A 102 MGAILRSTDRG 112 (737)
T ss_dssp CCEEEEESSSS
T ss_pred CccEEEeCCCC
Confidence 25566665544
No 375
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=36.87 E-value=1e+02 Score=28.88 Aligned_cols=58 Identities=19% Similarity=0.254 Sum_probs=37.3
Q ss_pred EEEEEeCCCcEEEEEEcCCC----c-EEEEEecCCCcccEEEEEeCCCCCEEEEEeCCCcEEE
Q 015650 272 LLATSSTKGTLVRIFNTLDG----T-LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHV 329 (403)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~----~-~~~~~~~~~~~~~v~~l~~s~d~~~l~s~~~dg~v~i 329 (403)
.+..|+.+|...++.....+ . .+.++.......+|..|.++++..+|.+++.++.++|
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 56678889984455544333 1 2233432123468999999999999998887765544
No 376
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=36.50 E-value=1e+02 Score=28.60 Aligned_cols=69 Identities=23% Similarity=0.258 Sum_probs=42.1
Q ss_pred ceEEEEEcCCC--CEEEEEeCCCcEEEEEEcCCC----cEEEEEecCCCcccEE-EEEeCCCCCEEEEEeCCCcEEE
Q 015650 260 RIACFALTQDG--QLLATSSTKGTLVRIFNTLDG----TLLQEVRRGADRAEIY-SLAFSSNAQWLAVSSDKGTVHV 329 (403)
Q Consensus 260 ~i~~~~~sp~g--~~l~s~~~dg~~i~iwd~~~~----~~~~~~~~~~~~~~v~-~l~~s~d~~~l~s~~~dg~v~i 329 (403)
..++|+....+ ..+..|+.+|..++| .+... ..+..+.......+|. .|.+++++.+|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV-~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKI-RADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEE-EEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEE-EeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35555554433 356678899983344 34322 2344444322245785 8999999999999987765544
No 377
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=32.69 E-value=1.8e+02 Score=27.77 Aligned_cols=69 Identities=19% Similarity=0.329 Sum_probs=44.0
Q ss_pred eEEEEEc----CCCC---EEEEEeCCCcEEEEEEcCCCc-EEEEEecCCCcccEEEEEeCCCC--CEEEEEeCCCcEEE
Q 015650 261 IACFALT----QDGQ---LLATSSTKGTLVRIFNTLDGT-LLQEVRRGADRAEIYSLAFSSNA--QWLAVSSDKGTVHV 329 (403)
Q Consensus 261 i~~~~~s----p~g~---~l~s~~~dg~~i~iwd~~~~~-~~~~~~~~~~~~~v~~l~~s~d~--~~l~s~~~dg~v~i 329 (403)
.+.|+.. .+++ .+..|+.+|..+++-...... .+..+..-....+|..|.++++. .+|++++.++.++|
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 4556543 3443 677889999845665554432 33333322234688899999988 89999988776554
No 378
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=31.09 E-value=3.3e+02 Score=25.35 Aligned_cols=55 Identities=11% Similarity=0.180 Sum_probs=37.7
Q ss_pred EEEEEcCCCcEEEEEecCCCc---ccEEEEE-eCC--CC--CEEEEEeCCCcEEEEEeecCCC
Q 015650 283 VRIFNTLDGTLLQEVRRGADR---AEIYSLA-FSS--NA--QWLAVSSDKGTVHVFNLKVNSG 337 (403)
Q Consensus 283 i~iwd~~~~~~~~~~~~~~~~---~~v~~l~-~s~--d~--~~l~s~~~dg~v~iwd~~~~~~ 337 (403)
|.|.|+.+|.++..+...... ..+..+. +.. || .++..|...|.|.-+|+.....
T Consensus 225 Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~~~ 287 (570)
T 3hx6_A 225 LLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAGKV 287 (570)
T ss_dssp EEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECSCSSC
T ss_pred EEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcCCCCc
Confidence 999999999999988743211 2233332 223 33 3788999999998888877653
No 379
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=29.31 E-value=2.4e+02 Score=23.21 Aligned_cols=150 Identities=13% Similarity=0.014 Sum_probs=67.9
Q ss_pred CCeEEEEEcCCC-CEEEEEcCCc---EEEEEcCCCeeEEEEecccCcceeEEEEeeeC-CeEEEeeCCCCCCCCCceEEE
Q 015650 86 PTLLHISFNQDH-GCFAAGTDHG---FRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMI 160 (403)
Q Consensus 86 ~~i~~i~~s~d~-~~l~~~~~~~---i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~~~~~~i~i 160 (403)
+.+..+...... .+++....+. +.+|++......- . +. ....+..+.... +...++..+.. |.++-
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~--~~e~i~~v~~~~~~~~~~v~~T~~-----G~iKr 94 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-KS--REEKIVGAFIREKFGNRLLLATKK-----GYVKK 94 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C-SS--TTCCEEEEEEGGGSCSEEEEEETT-----SEEEE
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-CC--CCCEEEEEECCcCCCCEEEEEeCC-----CEEEE
Confidence 445554443333 4444444443 3345543222111 1 43 455666664421 22233334444 89998
Q ss_pred EECCCCc------eeEEEecCCceeEEEEecC-ceEEE--ecCeEEEEEcCC---------ceeeeEeeccCCCceeEEE
Q 015650 161 WDDHQSR------CIGELSFRSEVRSVKLRRD-RIIVV--LEQKIFVYNFAD---------LKLLHQIETIANPKGLCAV 222 (403)
Q Consensus 161 wd~~~~~------~~~~~~~~~~i~~~~~~~~-~~~~~--~d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~~~ 222 (403)
..+..-. ....++..+.+..+..... ..+++ ..|.++.+.... |.....+.. ...+..+..
T Consensus 95 ~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~ 173 (276)
T 3no0_A 95 IPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRI 173 (276)
T ss_dssp EEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEE
T ss_pred EEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEE
Confidence 8765432 1222333445555444433 33333 477777776533 111111221 123333333
Q ss_pred eeCCCeEEEEeeCCccCeEEEEEccC
Q 015650 223 SQGVGSLVLVCPGLQKGQVRVEHYAS 248 (403)
Q Consensus 223 ~~~~~~~~~~~~g~~d~~i~v~d~~~ 248 (403)
..+++.+++++ ..|.++...+..
T Consensus 174 ~~~~~~ll~~T---~~G~~kr~~~~e 196 (276)
T 3no0_A 174 WNGEPYLLVIT---AKGRVKKISHEE 196 (276)
T ss_dssp ESSCSEEEEEE---TTSCEEEEEGGG
T ss_pred eCCCCEEEEEe---CCCcEEEeEHHH
Confidence 33444555554 667777776543
No 380
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=28.14 E-value=3.7e+02 Score=25.05 Aligned_cols=151 Identities=13% Similarity=0.187 Sum_probs=85.9
Q ss_pred eEEEEECCCCceeEEEec---CCce---------------eEEEEec-Cc-eEEEe-----cCeEEEEEcCCceeee--E
Q 015650 157 KVMIWDDHQSRCIGELSF---RSEV---------------RSVKLRR-DR-IIVVL-----EQKIFVYNFADLKLLH--Q 209 (403)
Q Consensus 157 ~i~iwd~~~~~~~~~~~~---~~~i---------------~~~~~~~-~~-~~~~~-----d~~i~i~d~~~~~~~~--~ 209 (403)
.|.++|=.+|+.+..+.. ...+ .++++.. +. .+++. ...|..||.+.+++.. .
T Consensus 230 yL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~ 309 (591)
T 2zux_A 230 YLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWT 309 (591)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEE
T ss_pred EEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEE
Confidence 488999889988887762 1212 2232211 11 12222 2358889987776533 3
Q ss_pred eeccC-----------CCceeEEEeeCCCeEEEEeeC--CccCeEEEEEccCCceeEEeecCCceEEEEEcCC--CCEEE
Q 015650 210 IETIA-----------NPKGLCAVSQGVGSLVLVCPG--LQKGQVRVEHYASKRTKFIMAHDSRIACFALTQD--GQLLA 274 (403)
Q Consensus 210 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~g--~~d~~i~v~d~~~~~~~~~~~~~~~i~~~~~sp~--g~~l~ 274 (403)
+.... +......+.-|+...++.-+. ..||++ +|... .+|...+....|.|+ |..++
T Consensus 310 ~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~~iD~dG~~-L~st~-------~gHGDa~hv~dldP~r~GlEv~ 381 (591)
T 2zux_A 310 LDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSMAVDHDGKG-MYSTG-------LGHGDALHTGDLDPGRPGLEVF 381 (591)
T ss_dssp EETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTEEECTTSCE-EEECS-------CCCCSCEEEECCCTTSSSCEEE
T ss_pred ecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeeeEECCCCCE-eeeCC-------CCCCCeeEEeecCCCCCCcEEE
Confidence 33211 233444555566555543210 123332 34432 378888888889987 44566
Q ss_pred EEeCC----CcEEEEEEcCCCcEEEEEecCCCcccEEEEEeCCCCC
Q 015650 275 TSSTK----GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ 316 (403)
Q Consensus 275 s~~~d----g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 316 (403)
.+.++ .. ..+.|..+|+.+.......+.+......|.|+..
T Consensus 382 ~~~E~~~~~~G-~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~~p 426 (591)
T 2zux_A 382 QVHEDKNAKYG-LSFRDAATGKILWGVYAGKDVGRGMAADIDPRYP 426 (591)
T ss_dssp EECCCTTSSCS-EEEEETTTCCEEEEECCSSCCCCEEEECCCTTSS
T ss_pred EEecCCCCCCc-cEEEECCCCcEEEEcCCCCCCCceeEEecCCCCC
Confidence 65554 14 6789999999998876544455666666777643
No 381
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=23.76 E-value=3.7e+02 Score=23.52 Aligned_cols=188 Identities=9% Similarity=0.085 Sum_probs=96.2
Q ss_pred eEEEEeeeCCeEEEeeCCCCCCCCCceEEEEECCCC-c------------eeEEEecCCceeEEEEecCceEEE-ecCeE
Q 015650 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS-R------------CIGELSFRSEVRSVKLRRDRIIVV-LEQKI 196 (403)
Q Consensus 131 ~v~~~~~~~~~~~~~s~~~d~~~~~~~i~iwd~~~~-~------------~~~~~~~~~~i~~~~~~~~~~~~~-~d~~i 196 (403)
.|..++......++++.+ |.|+.|-.... + ....+.....|..|+......+++ .||.|
T Consensus 76 ~v~~va~G~~h~~~l~~~-------G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G~~hs~al~~~G~v 148 (423)
T 3mvd_K 76 DAVDISAGGMHNLVLTKS-------GDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRV 148 (423)
T ss_dssp SEEEEEECSSEEEEEETT-------SCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEECSSEEEEEETTSCE
T ss_pred CceEEeeCCCeEEEEeCC-------CeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcCcCeEEEEeCCCeE
Confidence 466666655555555543 88999964321 1 011122345677777766666655 58999
Q ss_pred EEEEc--CC-ceee--------eEeeccCCCceeEEEeeCCCeEEEEeeCCccCeEEEEEccC-Cc--------------
Q 015650 197 FVYNF--AD-LKLL--------HQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KR-------------- 250 (403)
Q Consensus 197 ~i~d~--~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v~d~~~-~~-------------- 250 (403)
+.|-. .. +++- ..... ........++....+.++++ .+|.|+.|-... ++
T Consensus 149 ~~wG~~~n~~GqlG~~~~~~~~~p~~~-~~~~~i~~va~G~~hs~alt---~~G~v~~wG~n~~GqLG~~~~~~~~~~~~ 224 (423)
T 3mvd_K 149 FAWGSFRDSHGNMGLTIDGNKRTPIDL-MEGTVCCSIASGADHLVILT---TAGKVFTVGCAEQGQLGRLSERSISGEGR 224 (423)
T ss_dssp EEEECEECSSSEEESBTTBCEEEEEES-STTCCEEEEEECSSEEEEEE---TTSCEEEEECCTTSTTSSCCTTTTTSCST
T ss_pred EEEeCCCCCCCCcCcCCCCCCceeeEe-cCCCcEEEEecCCCeEEEEe---cCCeEEEeeCCcCCccCCCcccccccccc
Confidence 99985 22 2210 01111 12223455555555544443 688999996432 11
Q ss_pred --------eeEEe-ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCC-----------CcEEEEEecCCCcccEEEEE
Q 015650 251 --------TKFIM-AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD-----------GTLLQEVRRGADRAEIYSLA 310 (403)
Q Consensus 251 --------~~~~~-~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~-----------~~~~~~~~~~~~~~~v~~l~ 310 (403)
...+. .....|..++... ...++.-..++. |+.|-... ......... ....|..|+
T Consensus 225 ~~~~~~~~p~~v~~~~~~~v~~i~~g~-~~~~~~~~~~g~-v~~wG~n~~gqlg~~~~~~~~~~~p~~~--~~~~v~~ia 300 (423)
T 3mvd_K 225 RGKRDLLRPTQLIITRAKPFEAIWATN-YCTFMRESQTQV-IWATGLNNFKQLAHETKGKEFALTPIKT--ELKDIRHIA 300 (423)
T ss_dssp TTTTTTSSCEEECCTTCCCEEEEEEET-TEEEEEETTTCC-EEEEEECTTCTTSSCCTTCSEEEEEEEE--CCCSEEEEE
T ss_pred cccccccCCeEEeecCCccEEEEEECC-cEEEEEECCCCe-EEEEeCCCCCcCCCCCCCCceeeeeEEc--CCCCeEEEE
Confidence 11111 1123345554332 222233357787 88886432 111111111 124577766
Q ss_pred eCCCCCEEEEEeCCCcEEEEEeecC
Q 015650 311 FSSNAQWLAVSSDKGTVHVFNLKVN 335 (403)
Q Consensus 311 ~s~d~~~l~s~~~dg~v~iwd~~~~ 335 (403)
-.. .+.+.-..||.|+.|-....
T Consensus 301 ~G~--~ht~alt~~G~v~~wG~n~~ 323 (423)
T 3mvd_K 301 GGQ--HHTVILTTDLKCSVVGRPEY 323 (423)
T ss_dssp ECS--SEEEEEETTCCEEEEECCGG
T ss_pred ccc--CeEEEEeCCCcEEEEECCCC
Confidence 543 34555568999999987554
No 382
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=22.57 E-value=3.1e+02 Score=22.22 Aligned_cols=74 Identities=16% Similarity=0.193 Sum_probs=47.1
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEEcCC-------CcEEEEEecCCCcccEEEEEeC-CCCCEEEEEeCCCcEEEE
Q 015650 259 SRIACFALTQDGQLLATSSTKGTLVRIFNTLD-------GTLLQEVRRGADRAEIYSLAFS-SNAQWLAVSSDKGTVHVF 330 (403)
Q Consensus 259 ~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~-------~~~~~~~~~~~~~~~v~~l~~s-~d~~~l~s~~~dg~v~iw 330 (403)
..|.++....++.+|+.++..|. ++...+.. +.....+.. ...+..+... .++..|+..+.+|.+..+
T Consensus 84 e~Iv~~~~~~~~~~lll~T~~G~-~Kr~~~~e~~~~~r~G~~~i~L~~---~d~lv~~~~~~~~~~~i~l~T~~G~~lrf 159 (256)
T 1zvt_A 84 ATVDHMLMESDDQKLLMASDAGY-GFVCTFNDLVARNRAGKALITLPE---NAHVMPPVVIEDASDMLLAITQAGRMLMF 159 (256)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSE-EEEEEGGGGCCCSTTCEECBCCCT---TCCBCCCEECCCTTCEEEEEETTSEEEEE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCe-EEEeEHHHhcccCcCceEEEEECC---CCEEEEEEEecCCCCEEEEEcCCCeEEEE
Confidence 45666643345677888899999 88887643 222223332 2344444444 345678888899999999
Q ss_pred EeecCC
Q 015650 331 NLKVNS 336 (403)
Q Consensus 331 d~~~~~ 336 (403)
.++.-.
T Consensus 160 ~~~ei~ 165 (256)
T 1zvt_A 160 PVSDLP 165 (256)
T ss_dssp EGGGSC
T ss_pred EHHHCC
Confidence 887644
No 383
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=20.63 E-value=3.9e+02 Score=22.63 Aligned_cols=158 Identities=13% Similarity=0.089 Sum_probs=85.3
Q ss_pred cCCceeEEEEec----CceEEE--ecCeEEEEEcCCcee-------eeEeeccCCCceeEEEeeCCCeEEEEeeCCccCe
Q 015650 174 FRSEVRSVKLRR----DRIIVV--LEQKIFVYNFADLKL-------LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQ 240 (403)
Q Consensus 174 ~~~~i~~~~~~~----~~~~~~--~d~~i~i~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~ 240 (403)
..+.|..+..-+ +..++. .+|.|+...+..... ...++. .+.+..+......+.+++++ ..|.
T Consensus 93 ~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T---~~G~ 168 (327)
T 3uc1_A 93 PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVS---ANGQ 168 (327)
T ss_dssp TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEE---TTSE
T ss_pred CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEE---CCCe
Confidence 345566654433 233333 488999888765221 112222 23333344444556666664 6788
Q ss_pred EEEEEcc--CCc--------eeEEe-ecCCceEEEEEcCCCCEEEEEeCCCcEEEEEEcCCC-------cEEEEEecCCC
Q 015650 241 VRVEHYA--SKR--------TKFIM-AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG-------TLLQEVRRGAD 302 (403)
Q Consensus 241 i~v~d~~--~~~--------~~~~~-~~~~~i~~~~~sp~g~~l~s~~~dg~~i~iwd~~~~-------~~~~~~~~~~~ 302 (403)
+..+... .-+ ...+. .....|.++...+++.+|+..+..|. ++.-.+... +-+..+.....
T Consensus 169 ~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~-~Krt~l~e~~~~~R~~~G~~~~~l~~~ 247 (327)
T 3uc1_A 169 SIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGY-AKRTAIEEYPVQGRGGKGVLTVMYDRR 247 (327)
T ss_dssp EEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSE-EEEEEGGGSCBCCTTSCCEESSCCCTT
T ss_pred EEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCc-EEEEEHHHccccCcCCCcEEEEEecCC
Confidence 8777766 311 01111 12445666666666778889999998 888776432 22222221111
Q ss_pred cccEEEEEeCCCCCEEEEEeCCCcEEEEEeecCC
Q 015650 303 RAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (403)
Q Consensus 303 ~~~v~~l~~s~d~~~l~s~~~dg~v~iwd~~~~~ 336 (403)
...+..+....+...++..+.+|.+.-++...-.
T Consensus 248 ~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i~ 281 (327)
T 3uc1_A 248 RGRLVGALIVDDDSELYAVTSGGGVIRTAARQVR 281 (327)
T ss_dssp TCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGSC
T ss_pred CCeEEEEEEeCCCccEEEEcCCCeEEEEehhhcc
Confidence 2334444443445566667788888888776644
No 384
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.07 E-value=2.2e+02 Score=19.50 Aligned_cols=27 Identities=11% Similarity=0.094 Sum_probs=17.1
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEEeecC
Q 015650 307 YSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (403)
Q Consensus 307 ~~l~~s~d~~~l~s~~~dg~v~iwd~~~~ 335 (403)
..+.+..+|.+++.- .++.+ +|.-.+.
T Consensus 59 ~~l~l~~dGNLVl~d-~~~~~-iW~S~t~ 85 (113)
T 3mez_B 59 CFMRLGHSGELDITD-DRLNT-VFVSNTV 85 (113)
T ss_dssp CEEEECTTSCEEEEC-TTSCE-EEECSCC
T ss_pred EEEEEeCCCcEEEEC-CCCCE-EEECCCc
Confidence 356777888877653 34444 7876653
Done!