Query 015655
Match_columns 403
No_of_seqs 235 out of 1043
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 16:23:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015655.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015655hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hks_A Heat-shock transcriptio 100.0 7.6E-40 2.6E-44 277.2 6.0 95 9-103 2-106 (106)
2 2ldu_A Heat shock factor prote 100.0 4.1E-39 1.4E-43 280.3 6.0 101 6-106 12-123 (125)
3 3hts_B Heat shock transcriptio 100.0 3.4E-33 1.2E-37 235.3 2.0 83 6-88 7-100 (102)
4 2jee_A YIIU; FTSZ, septum, coi 90.9 1.6 5.5E-05 35.0 9.2 53 129-181 25-77 (81)
5 1fli_A FLI-1; transcription/DN 88.5 0.19 6.3E-06 41.8 2.0 63 11-73 5-68 (98)
6 1awc_A Protein (GA binding pro 87.1 0.2 6.9E-06 42.4 1.4 58 16-73 5-63 (110)
7 2ypr_A Protein FEV; transcript 86.9 0.25 8.6E-06 41.2 1.9 75 11-85 7-86 (102)
8 2dao_A Transcription factor ET 86.8 0.26 8.9E-06 42.2 2.0 80 6-85 3-88 (118)
9 1wwx_A E74-like factor 5 ESE-2 86.4 0.37 1.3E-05 40.6 2.7 68 6-73 3-73 (107)
10 1bc8_C SAP-1, protein (SAP-1 E 86.2 0.28 9.6E-06 40.3 1.8 76 11-86 4-84 (93)
11 4avp_A ETS translocation varia 85.7 0.35 1.2E-05 40.7 2.2 76 10-85 10-90 (106)
12 1gvj_A C-ETS-1 protein, P54; t 85.0 0.33 1.1E-05 42.9 1.8 78 9-86 37-119 (146)
13 3he5_B Synzip2; heterodimeric 83.9 3.3 0.00011 29.5 6.2 41 129-169 8-48 (52)
14 1deb_A APC protein, adenomatou 83.0 5.9 0.0002 29.0 7.3 46 126-171 5-50 (54)
15 2nny_A C-ETS-1 protein, P54; p 81.0 0.68 2.3E-05 41.9 2.2 76 10-85 63-143 (171)
16 3jtg_A ETS-related transcripti 78.9 0.51 1.7E-05 39.4 0.6 73 13-85 6-85 (103)
17 1wt6_A Myotonin-protein kinase 77.5 8.7 0.0003 30.7 7.3 44 127-170 27-70 (81)
18 1yo5_C SAM pointed domain cont 75.8 0.83 2.8E-05 37.8 1.1 68 7-74 6-76 (97)
19 1hbx_G ETS-domain protein ELK- 75.8 0.85 2.9E-05 40.7 1.2 76 11-86 5-85 (157)
20 3hnw_A Uncharacterized protein 75.5 15 0.00052 31.7 9.2 50 129-178 80-129 (138)
21 2jee_A YIIU; FTSZ, septum, coi 74.1 30 0.001 27.6 9.7 55 128-182 10-71 (81)
22 3cvf_A Homer-3, homer protein 71.3 7.5 0.00026 30.9 5.5 25 142-166 31-55 (79)
23 3tnu_B Keratin, type II cytosk 71.2 26 0.00087 29.6 9.4 43 128-170 33-75 (129)
24 2lf8_A Transcription factor ET 73.7 0.85 2.9E-05 39.5 0.0 58 16-73 9-68 (128)
25 2yy0_A C-MYC-binding protein; 69.3 9.2 0.00031 28.0 5.3 29 131-159 19-47 (53)
26 2xdj_A Uncharacterized protein 68.9 31 0.001 27.5 8.7 50 139-188 21-70 (83)
27 3q8t_A Beclin-1; autophagy, AT 67.8 30 0.001 28.0 8.7 49 125-173 5-53 (96)
28 1a93_B MAX protein, coiled coi 67.3 8.1 0.00028 26.1 4.2 28 137-164 6-33 (34)
29 1t2k_D Cyclic-AMP-dependent tr 66.9 11 0.00037 27.9 5.4 30 128-157 26-55 (61)
30 3cve_A Homer protein homolog 1 66.5 23 0.00079 27.6 7.3 20 153-172 15-34 (72)
31 2wt7_A Proto-oncogene protein 65.6 13 0.00046 27.7 5.7 29 128-156 27-55 (63)
32 2wt7_B Transcription factor MA 65.6 13 0.00044 30.2 6.0 41 130-170 47-87 (90)
33 2xu6_A MDV1 coiled coil; prote 65.4 9.9 0.00034 29.7 5.0 52 122-173 19-70 (72)
34 2w83_C C-JUN-amino-terminal ki 64.7 8.9 0.0003 30.3 4.6 41 128-168 34-74 (77)
35 3hnw_A Uncharacterized protein 64.7 44 0.0015 28.8 9.6 48 131-178 75-122 (138)
36 1pue_E Protein (transcription 64.5 2 6.9E-05 34.9 1.0 58 16-73 6-68 (89)
37 3tnu_A Keratin, type I cytoske 64.1 25 0.00086 29.7 7.9 41 129-169 36-76 (131)
38 4etp_A Kinesin-like protein KA 63.9 19 0.00066 36.2 8.3 55 132-186 4-58 (403)
39 4dzn_A Coiled-coil peptide CC- 61.8 12 0.0004 24.5 4.0 23 129-151 7-29 (33)
40 3oja_B Anopheles plasmodium-re 61.2 33 0.0011 35.0 9.7 26 129-154 507-532 (597)
41 3a7p_A Autophagy protein 16; c 60.5 55 0.0019 29.0 9.5 33 148-180 99-131 (152)
42 2yy0_A C-MYC-binding protein; 60.3 16 0.00055 26.7 5.1 32 123-154 18-49 (53)
43 1g6u_A Domain swapped dimer; d 60.0 22 0.00076 24.9 5.5 10 129-138 5-14 (48)
44 3na7_A HP0958; flagellar bioge 57.4 44 0.0015 31.1 9.1 8 255-262 179-186 (256)
45 2v66_B Nuclear distribution pr 56.1 86 0.0029 26.3 9.6 43 141-183 38-80 (111)
46 1kd8_B GABH BLL, GCN4 acid bas 55.6 15 0.00051 25.0 3.8 26 128-153 5-30 (36)
47 1wle_A Seryl-tRNA synthetase; 55.3 49 0.0017 34.3 9.7 96 87-186 43-150 (501)
48 1jnm_A Proto-oncogene C-JUN; B 55.0 10 0.00035 28.2 3.4 30 128-157 26-55 (62)
49 3m48_A General control protein 54.3 17 0.00057 24.4 3.8 25 128-152 4-28 (33)
50 1ci6_A Transcription factor AT 53.7 24 0.00082 26.4 5.3 26 129-154 28-53 (63)
51 3e98_A GAF domain of unknown f 53.3 30 0.001 32.5 7.2 21 82-102 37-59 (252)
52 3a2a_A Voltage-gated hydrogen 51.5 55 0.0019 24.3 6.7 35 131-165 11-45 (58)
53 3uux_B Mitochondrial division 51.4 27 0.00092 33.1 6.3 40 129-168 182-221 (242)
54 3oja_B Anopheles plasmodium-re 51.4 54 0.0019 33.4 9.3 28 145-172 537-564 (597)
55 2dq0_A Seryl-tRNA synthetase; 50.5 39 0.0013 34.5 8.0 65 123-187 37-104 (455)
56 1kd8_A GABH AIV, GCN4 acid bas 49.3 34 0.0012 23.2 4.8 27 128-154 5-31 (36)
57 3c3g_A Alpha/beta peptide with 48.1 24 0.00082 23.6 3.8 25 128-152 4-28 (33)
58 4dzn_A Coiled-coil peptide CC- 48.0 46 0.0016 21.6 5.1 28 132-166 3-30 (33)
59 1nkp_B MAX protein, MYC proto- 47.8 20 0.00068 27.9 4.2 31 132-162 48-78 (83)
60 2wq1_A General control protein 47.5 25 0.00085 23.5 3.8 25 128-152 4-28 (33)
61 1hjb_A Ccaat/enhancer binding 47.4 27 0.00093 28.1 5.0 28 142-169 40-67 (87)
62 3efg_A Protein SLYX homolog; x 47.0 35 0.0012 26.7 5.5 44 129-172 19-62 (78)
63 3qne_A Seryl-tRNA synthetase, 46.8 60 0.002 33.6 8.7 72 123-194 39-114 (485)
64 1nkp_A C-MYC, MYC proto-oncoge 46.8 27 0.00092 27.8 4.9 35 130-164 51-85 (88)
65 3i00_A HIP-I, huntingtin-inter 46.8 1.3E+02 0.0045 25.3 9.6 27 130-156 14-40 (120)
66 4e61_A Protein BIM1; EB1-like 46.4 82 0.0028 26.3 7.9 11 167-177 47-57 (106)
67 2v66_B Nuclear distribution pr 46.4 1.1E+02 0.0037 25.7 8.6 52 128-179 39-90 (111)
68 4etp_A Kinesin-like protein KA 45.4 59 0.002 32.6 8.3 53 126-178 5-57 (403)
69 3mq7_A Bone marrow stromal ant 45.4 34 0.0012 29.1 5.4 16 147-162 73-88 (121)
70 3c3f_A Alpha/beta peptide with 45.0 28 0.00097 23.3 3.8 25 128-152 5-29 (34)
71 1gd2_E Transcription factor PA 44.8 24 0.00082 27.3 4.1 10 130-139 35-44 (70)
72 1uo4_A General control protein 44.4 29 0.00099 23.3 3.8 25 128-152 5-29 (34)
73 3u06_A Protein claret segregat 44.1 63 0.0022 32.5 8.3 55 125-186 4-58 (412)
74 3q0x_A Centriole protein; cent 43.0 90 0.0031 29.3 8.5 52 126-177 166-217 (228)
75 4emc_A Monopolin complex subun 42.9 75 0.0026 29.0 7.7 37 133-169 22-58 (190)
76 1uix_A RHO-associated kinase; 42.8 1.2E+02 0.004 23.6 9.8 59 130-188 3-68 (71)
77 1ses_A Seryl-tRNA synthetase; 42.5 44 0.0015 33.6 6.9 72 123-194 34-107 (421)
78 1lwu_C Fibrinogen gamma chain; 42.1 59 0.002 31.9 7.4 11 256-266 129-139 (323)
79 2zqm_A Prefoldin beta subunit 41.9 81 0.0028 25.3 7.2 42 129-170 68-109 (117)
80 2hy6_A General control protein 41.6 34 0.0012 23.0 3.8 25 128-152 5-29 (34)
81 2bni_A General control protein 41.5 34 0.0012 23.0 3.8 25 128-152 5-29 (34)
82 1s1c_X RHO-associated, coiled- 41.4 1.2E+02 0.0042 23.5 9.7 62 129-190 4-70 (71)
83 2xdj_A Uncharacterized protein 41.0 1.3E+02 0.0045 23.7 9.0 34 149-182 24-57 (83)
84 3u06_A Protein claret segregat 40.9 80 0.0027 31.8 8.4 28 126-153 12-39 (412)
85 3a7p_A Autophagy protein 16; c 40.5 1.2E+02 0.0042 26.7 8.5 51 130-180 67-124 (152)
86 3ra3_B P2F; coiled coil domain 40.3 23 0.0008 22.3 2.7 16 134-149 3-18 (28)
87 2v71_A Nuclear distribution pr 39.3 1.8E+02 0.006 26.5 9.6 17 147-163 97-113 (189)
88 1gmj_A ATPase inhibitor; coile 39.2 1.2E+02 0.0042 24.2 7.5 41 132-172 38-78 (84)
89 2oxj_A Hybrid alpha/beta pepti 38.9 40 0.0014 22.6 3.8 25 128-152 5-29 (34)
90 3swy_A Cyclic nucleotide-gated 38.8 1E+02 0.0036 21.9 7.1 42 129-173 3-44 (46)
91 3swf_A CGMP-gated cation chann 38.7 1.4E+02 0.0048 23.4 8.4 47 128-177 4-50 (74)
92 1x79_B RAB GTPase binding effe 38.4 1.8E+02 0.006 24.4 9.1 44 127-173 16-59 (112)
93 2aze_A Transcription factor DP 37.0 99 0.0034 27.4 7.3 35 131-165 5-39 (155)
94 1lwu_C Fibrinogen gamma chain; 36.6 85 0.0029 30.8 7.6 10 255-265 147-159 (323)
95 2w6a_A ARF GTPase-activating p 36.3 1E+02 0.0035 23.3 6.1 38 135-172 17-54 (63)
96 3he5_A Synzip1; heterodimeric 35.8 1.1E+02 0.0038 21.4 6.5 38 129-166 8-45 (49)
97 1ci6_A Transcription factor AT 35.4 1.1E+02 0.0036 22.8 6.3 30 140-169 25-54 (63)
98 3efg_A Protein SLYX homolog; x 34.9 1.1E+02 0.0036 23.9 6.5 47 128-174 11-57 (78)
99 2dgc_A Protein (GCN4); basic d 34.9 31 0.0011 25.9 3.3 28 141-168 33-60 (63)
100 2r2v_A GCN4 leucine zipper; co 34.8 51 0.0017 22.2 3.8 25 128-152 5-29 (34)
101 3oja_A Leucine-rich immune mol 34.7 1.3E+02 0.0044 29.9 8.9 41 132-172 429-469 (487)
102 3lss_A Seryl-tRNA synthetase; 34.7 1.3E+02 0.0044 31.1 8.9 74 123-196 43-149 (484)
103 1t2k_D Cyclic-AMP-dependent tr 34.6 1.3E+02 0.0044 21.9 6.7 32 140-171 24-55 (61)
104 4emc_A Monopolin complex subun 34.5 2.3E+02 0.0078 25.9 9.5 49 126-174 22-70 (190)
105 1fxk_A Prefoldin; archaeal pro 34.1 89 0.003 24.6 6.2 41 129-169 63-103 (107)
106 1nlw_A MAD protein, MAX dimeri 34.0 51 0.0017 25.8 4.5 31 131-161 47-77 (80)
107 1g6u_A Domain swapped dimer; d 33.9 1.2E+02 0.0041 21.2 6.7 13 157-169 25-37 (48)
108 3m91_A Proteasome-associated A 33.8 1.1E+02 0.0037 22.2 5.9 35 128-162 13-47 (51)
109 3uux_B Mitochondrial division 33.6 1.5E+02 0.0051 28.1 8.3 60 134-193 152-211 (242)
110 3a2a_A Voltage-gated hydrogen 33.0 1.5E+02 0.0051 22.0 6.7 43 145-191 11-53 (58)
111 3s4r_A Vimentin; alpha-helix, 32.2 94 0.0032 24.9 6.0 53 127-179 19-76 (93)
112 3vmx_A Voltage-gated hydrogen 32.1 1.4E+02 0.0049 21.5 7.2 31 130-160 3-33 (48)
113 3q8t_A Beclin-1; autophagy, AT 31.8 2E+02 0.0068 23.1 8.5 28 128-155 22-49 (96)
114 2akf_A Coronin-1A; coiled coil 31.7 1E+02 0.0035 20.1 4.8 22 153-174 7-28 (32)
115 1hjb_A Ccaat/enhancer binding 30.9 1.4E+02 0.0049 23.8 6.8 23 130-152 42-64 (87)
116 2fcw_A Alpha-2-macroglobulin r 30.7 2.4E+02 0.0081 23.6 8.8 13 130-142 37-49 (109)
117 1deq_A Fibrinogen (alpha chain 30.7 1.5E+02 0.0052 29.8 8.3 44 127-170 116-159 (390)
118 1joc_A EEA1, early endosomal a 30.5 1.1E+02 0.0038 25.6 6.4 14 138-151 18-31 (125)
119 3he4_A Synzip6; heterodimeric 30.4 1.2E+02 0.0041 21.8 5.5 35 125-159 18-52 (56)
120 1jcd_A Major outer membrane li 30.3 1.6E+02 0.0054 21.4 6.3 40 129-168 9-48 (52)
121 3cue_D Transport protein parti 30.2 30 0.001 31.5 3.0 61 13-74 88-157 (193)
122 3mq7_A Bone marrow stromal ant 30.2 2.1E+02 0.0071 24.3 7.8 23 143-165 76-98 (121)
123 1fxk_C Protein (prefoldin); ar 30.0 1.8E+02 0.0062 23.9 7.7 43 129-171 86-128 (133)
124 2wt7_B Transcription factor MA 29.8 77 0.0026 25.6 5.0 7 96-102 25-31 (90)
125 1go4_E MAD1 (mitotic arrest de 29.5 68 0.0023 26.5 4.7 30 132-161 13-42 (100)
126 3qh9_A Liprin-beta-2; coiled-c 29.3 2.1E+02 0.0073 22.7 9.0 47 127-173 22-68 (81)
127 1gu4_A CAAT/enhancer binding p 29.0 42 0.0014 26.4 3.2 23 145-167 43-65 (78)
128 3t97_C Nuclear pore glycoprote 28.9 35 0.0012 25.9 2.6 29 129-157 17-45 (64)
129 4ani_A Protein GRPE; chaperone 27.8 2E+02 0.007 26.5 8.2 38 132-169 60-97 (213)
130 3tnu_A Keratin, type I cytoske 27.6 2.7E+02 0.0092 23.2 8.9 27 127-153 48-74 (131)
131 2dgc_A Protein (GCN4); basic d 27.3 83 0.0028 23.5 4.5 26 128-153 34-59 (63)
132 1joc_A EEA1, early endosomal a 27.2 2.7E+02 0.0092 23.1 8.7 34 139-172 5-38 (125)
133 1kd8_A GABH AIV, GCN4 acid bas 26.8 1.5E+02 0.0052 20.1 5.5 31 141-171 4-34 (36)
134 1use_A VAsp, vasodilator-stimu 26.7 1.5E+02 0.0053 21.0 5.5 24 131-154 7-31 (45)
135 1go4_E MAD1 (mitotic arrest de 26.6 1.1E+02 0.0037 25.2 5.5 38 118-155 6-43 (100)
136 1l8d_A DNA double-strand break 26.6 1.3E+02 0.0045 24.0 6.1 35 132-166 4-38 (112)
137 3vmx_A Voltage-gated hydrogen 26.5 1.8E+02 0.0062 20.9 7.0 39 145-183 4-42 (48)
138 3viq_B Mating-type switching p 26.4 2.5E+02 0.0085 22.4 8.7 60 127-187 4-69 (85)
139 2q6q_A Spindle POLE BODY compo 26.4 2.3E+02 0.0077 22.0 7.7 44 129-172 15-58 (74)
140 4e61_A Protein BIM1; EB1-like 26.0 2.8E+02 0.0097 23.0 8.8 30 144-173 10-39 (106)
141 2eqb_B RAB guanine nucleotide 25.9 2.7E+02 0.0093 22.7 8.9 48 126-173 7-54 (97)
142 2dq3_A Seryl-tRNA synthetase; 25.9 40 0.0014 34.0 3.3 63 124-186 37-102 (425)
143 3m91_A Proteasome-associated A 25.8 1.9E+02 0.0065 20.9 7.2 41 130-170 8-48 (51)
144 1m1j_C Fibrinogen gamma chain; 25.8 2.2E+02 0.0077 28.7 8.8 44 143-186 89-132 (409)
145 2zdi_C Prefoldin subunit alpha 25.6 1.1E+02 0.0038 26.1 5.7 45 128-172 95-139 (151)
146 3tnu_B Keratin, type II cytosk 25.5 2.9E+02 0.0099 22.9 8.9 27 127-153 46-72 (129)
147 1sz7_A BET3 homolog, trafficki 25.4 49 0.0017 30.3 3.5 62 13-75 85-154 (200)
148 3mtu_A Tropomyosin alpha-1 cha 25.4 1.9E+02 0.0066 22.2 6.5 43 129-171 7-49 (75)
149 3m9b_A Proteasome-associated A 25.2 83 0.0028 30.0 5.1 34 164-197 73-106 (251)
150 2w6a_A ARF GTPase-activating p 25.1 2.2E+02 0.0076 21.4 8.6 37 129-165 25-61 (63)
151 4h22_A Leucine-rich repeat fli 24.9 2E+02 0.0069 23.8 6.8 42 124-165 23-64 (103)
152 3s9g_A Protein hexim1; cyclin 24.6 3E+02 0.01 22.7 8.7 52 128-179 34-85 (104)
153 3v86_A De novo design helix; c 24.4 70 0.0024 20.0 2.9 21 129-149 5-25 (27)
154 1aq5_A Matrilin-1, CMP, cartil 24.2 1.4E+02 0.0049 21.4 5.0 26 143-168 21-46 (47)
155 1dh3_A Transcription factor CR 24.1 58 0.002 23.7 3.0 25 141-165 25-49 (55)
156 3ghg_A Fibrinogen alpha chain; 24.0 1.9E+02 0.0065 30.4 7.9 11 174-184 181-191 (562)
157 2oqq_A Transcription factor HY 23.9 1.9E+02 0.0065 20.3 5.5 8 141-148 20-27 (42)
158 2aze_B Transcription factor E2 23.8 1.2E+02 0.0043 24.8 5.4 24 132-155 7-30 (106)
159 1jcd_A Major outer membrane li 23.7 2.1E+02 0.0073 20.7 7.4 44 131-174 4-47 (52)
160 3kqg_A Langerin, C-type lectin 23.1 1.1E+02 0.0038 25.9 5.2 14 129-142 4-17 (182)
161 1wt6_A Myotonin-protein kinase 22.8 2.9E+02 0.0099 21.9 9.1 47 138-184 24-70 (81)
162 1fzc_C Fibrin; blood coagulati 22.6 53 0.0018 32.2 3.3 11 256-266 120-130 (319)
163 3o0z_A RHO-associated protein 22.6 3.5E+02 0.012 24.1 8.4 54 125-178 84-137 (168)
164 2wt7_A Proto-oncogene protein 22.2 2.4E+02 0.008 20.7 7.0 30 140-169 25-54 (63)
165 3ra3_A P1C; coiled coil domain 22.1 44 0.0015 21.0 1.7 16 136-151 5-20 (28)
166 3m9b_A Proteasome-associated A 21.6 94 0.0032 29.6 4.7 38 132-169 55-92 (251)
167 1dh3_A Transcription factor CR 21.3 95 0.0033 22.5 3.7 23 129-151 27-49 (55)
168 4h22_A Leucine-rich repeat fli 21.2 3.5E+02 0.012 22.3 9.4 35 134-168 19-53 (103)
169 1wlq_A Geminin; coiled-coil; 2 20.3 2.9E+02 0.0098 22.0 6.5 24 132-155 39-62 (83)
No 1
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=100.00 E-value=7.6e-40 Score=277.19 Aligned_cols=95 Identities=43% Similarity=0.823 Sum_probs=91.6
Q ss_pred CCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhcccccccCcCCchhhhhccccccceeec----------
Q 015655 9 NSLPPFLAKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVD---------- 78 (403)
Q Consensus 9 ~~~~~Fl~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLPkyFkh~nfsSFvRQLN~YGF~Kv~---------- 78 (403)
+++|+||.|||.||+||++++||+|+++|++|||+|+.+|+++|||+||||+||+|||||||+|||+|+.
T Consensus 2 ~~~p~F~~KL~~mv~d~~~~~iI~W~~~G~sFvI~d~~~F~~~vLp~yFkh~n~~SFvRQLN~YGF~Kv~~~~~~~~~~~ 81 (106)
T 1hks_A 2 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFD 81 (106)
T ss_dssp TTCCTTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSCCCHHHHHHHHHHHCCCCSSCSSSCCSSCT
T ss_pred CCcCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEECCHHHHHHHHhHHhcCCCcHHHHHHhhhcCCCeEEecccccCccCC
Confidence 5788999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred CCCceeccCccccCccccccccccc
Q 015655 79 PEQWEFANEDFVRGQPERLKNIHRR 103 (403)
Q Consensus 79 ~~~~eF~h~~F~Rg~~~lL~~IkRk 103 (403)
++.|+|+|++|+||+|+||.+|+||
T Consensus 82 ~~~~ef~h~~F~Rg~~~LL~~IkRk 106 (106)
T 1hks_A 82 RDEIEFSHPFFKRNSPFLLDQIKRK 106 (106)
T ss_dssp TSTTEECCTTCCSSCTTSTTTCCCC
T ss_pred CCceEEECcCccCcCHHHHhhCcCC
Confidence 4689999999999999999999996
No 2
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=280.34 Aligned_cols=101 Identities=47% Similarity=0.844 Sum_probs=96.0
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhcccccccCcCCchhhhhccccccceeec-------
Q 015655 6 GSSNSLPPFLAKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVD------- 78 (403)
Q Consensus 6 ~~~~~~~~Fl~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLPkyFkh~nfsSFvRQLN~YGF~Kv~------- 78 (403)
......++||.|||.||+||++++||+|+++|++|||+|+.+|+++|||+||||+||+|||||||+|||+|+.
T Consensus 12 ~~~~~~~~F~~KL~~ml~d~~~~~iI~W~~~G~sFvV~d~~~F~~~vLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~~~~ 91 (125)
T 2ldu_A 12 AGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGL 91 (125)
T ss_dssp CSSCCCCHHHHHHHHHHHCTTTTTTEEECTTSSEEEECCHHHHHHHHHHHHSSCCCHHHHHHHHHHTTCEEEECSCCSSS
T ss_pred ccCCCCCcHHHHHHHHhhCCCCCCEEEEcCCCCEEEEeCHHHHHHHHhHHhcCCCcHHHHHHHhcccCceEEeecccccc
Confidence 4567899999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred ----CCCceeccCccccCcccccccccccCCC
Q 015655 79 ----PEQWEFANEDFVRGQPERLKNIHRRKPV 106 (403)
Q Consensus 79 ----~~~~eF~h~~F~Rg~~~lL~~IkRkkp~ 106 (403)
++.|+|+||+|+||+++||.+|+||+++
T Consensus 92 ~~~~~~~~eF~H~~F~Rg~~~LL~~IkRk~~~ 123 (125)
T 2ldu_A 92 VKPERDDTEFQHPCFLRGQEQLLENIKRKVTS 123 (125)
T ss_dssp SSCSSCCEEEECTTCBTTBGGGTTTSCCCTTS
T ss_pred ccCCCCccEEECccccCCCHHHHhhCcCCCCC
Confidence 4679999999999999999999999874
No 3
>3hts_B Heat shock transcription factor; transcription regulation, DNA-binding protein, complex (WING helix_TURN_ helix-DNA); 1.75A {Kluyveromyces lactis} SCOP: a.4.5.22 PDB: 2hts_A 1fyk_A* 1fym_A 1fyl_A 3hsf_A 1fbu_A 1fbs_A 1fbq_A
Probab=99.97 E-value=3.4e-33 Score=235.28 Aligned_cols=83 Identities=47% Similarity=0.869 Sum_probs=77.8
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhcccccccCcCCchhhhhccccccceeec-------
Q 015655 6 GSSNSLPPFLAKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVD------- 78 (403)
Q Consensus 6 ~~~~~~~~Fl~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLPkyFkh~nfsSFvRQLN~YGF~Kv~------- 78 (403)
.|...+|+||.|||.||+||++++||+|+++|++|||+|+.+|+++|||+||||+||+|||||||+|||+|+.
T Consensus 7 ~~~~~~p~F~~KL~~ml~d~~~~~iI~W~~~G~sfiI~d~~~F~~~VLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~g~~ 86 (102)
T 3hts_B 7 VGSMARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSM 86 (102)
T ss_dssp ---CCSCHHHHHHHHHHHCGGGTTTSEECTTSCSEEESCHHHHHHHTHHHHCSSCCHHHHHHHHHHTTEEECC-------
T ss_pred CCCCCCCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEEcCHHHHHHHHHHHhcCCCcHHHHHHHhhcCCceEeeccccCcc
Confidence 5778899999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred ----CCCceeccCc
Q 015655 79 ----PEQWEFANED 88 (403)
Q Consensus 79 ----~~~~eF~h~~ 88 (403)
++.|||.|++
T Consensus 87 ~~~~~~~wEF~n~~ 100 (102)
T 3hts_B 87 LSNNDSRWEFENER 100 (102)
T ss_dssp --CCSCCEEEEECC
T ss_pred cCCCcCCeEecCCC
Confidence 6789999986
No 4
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=90.95 E-value=1.6 Score=34.97 Aligned_cols=53 Identities=26% Similarity=0.376 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKMVSF 181 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~f 181 (403)
+.-+|+.||..+..|..+.+.++.....+..+.+.|++....-+.+.+.|+..
T Consensus 25 LqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk 77 (81)
T 2jee_A 25 LQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGR 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45577888888888888887766666667777777776666655555565543
No 5
>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=88.47 E-value=0.19 Score=41.78 Aligned_cols=63 Identities=22% Similarity=0.335 Sum_probs=46.4
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhcccc-cccCcCCchhhhhcccccc
Q 015655 11 LPPFLAKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYG 73 (403)
Q Consensus 11 ~~~Fl~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YG 73 (403)
......=|.++|+|+.+.++|+|...+.-|.+.|+++.++.--. +-=...||.-.-|-|..|.
T Consensus 5 ~~~LwqFL~~LL~d~~~~~~I~W~~~~g~Fklvd~e~VArlWG~rK~kp~MnYeklSRaLRyYY 68 (98)
T 1fli_A 5 QIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYY 68 (98)
T ss_dssp SCCSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHHH
T ss_pred ceeHHHHHHHHhcCcccCCCeEEeCCCCEEEEcCHHHHHHHHHhccCCCCcCHHHHHHHHHHHH
Confidence 34455566778899999999999988889999999877763222 1113567888888887774
No 6
>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21
Probab=87.08 E-value=0.2 Score=42.38 Aligned_cols=58 Identities=19% Similarity=0.260 Sum_probs=44.2
Q ss_pred HHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhccccc-ccCcCCchhhhhcccccc
Q 015655 16 AKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLPK-YFKHNNFSSFIRQLNTYG 73 (403)
Q Consensus 16 ~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLPk-yFkh~nfsSFvRQLN~YG 73 (403)
.=|.++|.|+++.++|+|...+.-|.+.|+++.++.--.+ -=...||...-|-|..|.
T Consensus 5 qFLleLL~d~~~~~~I~W~~~~geFkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY 63 (110)
T 1awc_A 5 QFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYY 63 (110)
T ss_dssp HHHHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGG
T ss_pred HHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHHccCCCCCCHHHHHHHHHHHH
Confidence 3467889999999999999988899999998877643221 113467888888888774
No 7
>2ypr_A Protein FEV; transcription; 2.64A {Homo sapiens} PDB: 1fli_A
Probab=86.94 E-value=0.25 Score=41.25 Aligned_cols=75 Identities=19% Similarity=0.294 Sum_probs=53.8
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhcccc-cccCcCCchhhhhccccccc----eeecCCCceec
Q 015655 11 LPPFLAKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYGF----RKVDPEQWEFA 85 (403)
Q Consensus 11 ~~~Fl~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YGF----~Kv~~~~~eF~ 85 (403)
.-....=|.++|+|+++.++|+|...+.-|.+.|+++.++.--. +-=...||.-+-|-|..|-= +||...+..|.
T Consensus 7 ~i~LwqFLl~LL~d~~~~~~I~W~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~Gkr~vYk 86 (102)
T 2ypr_A 7 QIQLWQFLLELLADRANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRYAYR 86 (102)
T ss_dssp SCCHHHHHHHHHTCGGGTTTCEECSSTTEEECSSHHHHHHHHHHHTTCTTCCHHHHHHHHTHHHHTTSEEECSSCSSEEE
T ss_pred cEeHHHHHHHHhcCCCCCCcccccCCCceEEecChHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEEEE
Confidence 33455667788999999999999988889999999888763221 11146789999999888742 45555555554
No 8
>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.85 E-value=0.26 Score=42.17 Aligned_cols=80 Identities=21% Similarity=0.334 Sum_probs=58.2
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCceEEcC-CCCeEEEECCcchhhcccc-cccCcCCchhhhhccccc---cc-eeecC
Q 015655 6 GSSNSLPPFLAKTYEMVDDSSTDLTVSWSS-SNKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTY---GF-RKVDP 79 (403)
Q Consensus 6 ~~~~~~~~Fl~KLy~mved~~~~~iI~Ws~-~G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~Y---GF-~Kv~~ 79 (403)
|+-++....-.=|.++|.|+.+.++|+|.. ++.-|.+.|++..++.--. +-=...||...-|-|..| |. +|+..
T Consensus 3 ~~~~g~~~LwqFLleLL~d~~~~~~I~W~~~~~g~Fklvdp~~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~G 82 (118)
T 2dao_A 3 SGSSGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPG 82 (118)
T ss_dssp CCCCCCCCHHHHHHHHHHCGGGTTTEEEEEGGGTEEEESCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHTSEECCSS
T ss_pred CccCcchHHHHHHHHHhCCcccCCceEeeCCCCCeEEEeCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCCEEeccC
Confidence 455666777788899999999999999987 4458999999877764222 222457899999999988 33 55555
Q ss_pred CCceec
Q 015655 80 EQWEFA 85 (403)
Q Consensus 80 ~~~eF~ 85 (403)
.+..|.
T Consensus 83 ~r~vY~ 88 (118)
T 2dao_A 83 QRLLFR 88 (118)
T ss_dssp SSSEEE
T ss_pred CeEEEE
Confidence 555554
No 9
>1wwx_A E74-like factor 5 ESE-2B; DNA binding, transcriptional activation and repression, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=86.38 E-value=0.37 Score=40.56 Aligned_cols=68 Identities=13% Similarity=0.137 Sum_probs=50.3
Q ss_pred CCCCCCCcHHHHHHHhccCCC-CCCceEEcC-CCCeEEEECCcchhhcccc-cccCcCCchhhhhcccccc
Q 015655 6 GSSNSLPPFLAKTYEMVDDSS-TDLTVSWSS-SNKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYG 73 (403)
Q Consensus 6 ~~~~~~~~Fl~KLy~mved~~-~~~iI~Ws~-~G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YG 73 (403)
+++++......=|.++|.||+ ..++|+|.. +..-|.+.|+++.++.--. +-=...||...-|-|..|.
T Consensus 3 sg~~g~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY 73 (107)
T 1wwx_A 3 SGSSGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYY 73 (107)
T ss_dssp CCCCSSCCHHHHHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHH
T ss_pred CCCCCcEEHHHHHHHHHcCcccCCCcEEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHH
Confidence 456677778888999999986 578999986 4567999999887774221 1113578888888888874
No 10
>1bc8_C SAP-1, protein (SAP-1 ETS domain); DNA-binding domain, winged helix-turn-helix, DNA-binding specificity, transcription/DNA complex; HET: DNA; 1.93A {Homo sapiens} SCOP: a.4.5.21 PDB: 1bc7_C* 1k6o_A 1dux_C*
Probab=86.24 E-value=0.28 Score=40.33 Aligned_cols=76 Identities=16% Similarity=0.275 Sum_probs=54.6
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhcccc-cccCcCCchhhhhcccccc---c-eeecCCCceec
Q 015655 11 LPPFLAKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYG---F-RKVDPEQWEFA 85 (403)
Q Consensus 11 ~~~Fl~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YG---F-~Kv~~~~~eF~ 85 (403)
......=|.++|.|+++.++|+|...+.-|.+.|+++.++.--. +-=...||...-|-|..|. . +|+...+..|.
T Consensus 4 ~i~Lw~FL~~LL~d~~~~~~I~W~~~~g~Fkl~d~~~VArlWG~rKnk~~MnYeklSRaLRyYY~~~il~Kv~g~r~vY~ 83 (93)
T 1bc8_C 4 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 83 (93)
T ss_dssp CCCHHHHHHHHTTCGGGTTTSEECSSSSEEECTTHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEEECTTSTTEEE
T ss_pred cccHHHHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEE
Confidence 34555667889999999999999987779999999887774222 1124578899999998874 2 44554555554
Q ss_pred c
Q 015655 86 N 86 (403)
Q Consensus 86 h 86 (403)
.
T Consensus 84 F 84 (93)
T 1bc8_C 84 F 84 (93)
T ss_dssp E
T ss_pred e
Confidence 3
No 11
>4avp_A ETS translocation variant 1; transcription, transcriptional activation and repression, DN binding protein, E twenty-SIX, erwing sarcoma; 1.82A {Homo sapiens} PDB: 4b06_A
Probab=85.73 E-value=0.35 Score=40.67 Aligned_cols=76 Identities=21% Similarity=0.325 Sum_probs=54.9
Q ss_pred CCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhcccc-cccCcCCchhhhhcccccc---c-eeecCCCcee
Q 015655 10 SLPPFLAKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYG---F-RKVDPEQWEF 84 (403)
Q Consensus 10 ~~~~Fl~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YG---F-~Kv~~~~~eF 84 (403)
+.-....=|.++|+|+++.++|+|...+..|.+.|++..++.--. +-=...||..+-|-|..|- . +|+...+..|
T Consensus 10 g~i~LwqFL~~LL~d~~~~~~I~W~~~~~~Fkl~dp~~VA~lWG~rKnkp~M~YeKlSRaLRyYY~kgii~Kv~G~r~vY 89 (106)
T 4avp_A 10 GSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVY 89 (106)
T ss_dssp -CCCHHHHHHHHHHCGGGTTTEEECSSTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEECTTCSSEE
T ss_pred CcEeHHHHHHHHHcCccCCCCCcccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCeEEecCCCeEEE
Confidence 334556667889999999999999998889999999888774222 1124578999999998873 3 5565555555
Q ss_pred c
Q 015655 85 A 85 (403)
Q Consensus 85 ~ 85 (403)
.
T Consensus 90 k 90 (106)
T 4avp_A 90 K 90 (106)
T ss_dssp E
T ss_pred E
Confidence 4
No 12
>1gvj_A C-ETS-1 protein, P54; transcription, autoinhibition, ETS domain; 1.53A {Homo sapiens} SCOP: a.4.5.21 PDB: 1md0_A 1r36_A 1k78_B 1k79_A* 1k7a_A* 2stt_A* 2stw_A*
Probab=85.04 E-value=0.33 Score=42.91 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=57.2
Q ss_pred CCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhcccc-cccCcCCchhhhhccccccc----eeecCCCce
Q 015655 9 NSLPPFLAKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYGF----RKVDPEQWE 83 (403)
Q Consensus 9 ~~~~~Fl~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YGF----~Kv~~~~~e 83 (403)
++......=|.++|.|+.+.++|+|...+-.|.+.|+++.++.--. |-=...||...-|-|..|.= +|+...+..
T Consensus 37 sg~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~Gkrlv 116 (146)
T 1gvj_A 37 SGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYV 116 (146)
T ss_dssp CCSCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTSEEECTTSSSE
T ss_pred CCceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEE
Confidence 4556677778899999999999999999989999999888874222 11235678888899988743 355545555
Q ss_pred ecc
Q 015655 84 FAN 86 (403)
Q Consensus 84 F~h 86 (403)
|..
T Consensus 117 Y~F 119 (146)
T 1gvj_A 117 YRF 119 (146)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 13
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=83.85 E-value=3.3 Score=29.51 Aligned_cols=41 Identities=24% Similarity=0.295 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQ 169 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~ 169 (403)
+...|.+||+|+-.|..+-+.|+.-..++..++..|+..+.
T Consensus 8 lrkkiarlkkdnlqlerdeqnlekiianlrdeiarleneva 48 (52)
T 3he5_B 8 LRKKIARLKKDNLQLERDEQNLEKIIANLRDEIARLENEVA 48 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHHHHHh
Confidence 67789999999988888777777666666666666655443
No 14
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=82.99 E-value=5.9 Score=29.05 Aligned_cols=46 Identities=22% Similarity=0.296 Sum_probs=37.2
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 126 RQGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLM 171 (403)
Q Consensus 126 ~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~ 171 (403)
..++..+++.||+++..|..||..--.+...++.+-..|++-+...
T Consensus 5 YdQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 5 YDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 3457789999999999999999988888888888877777766543
No 15
>2nny_A C-ETS-1 protein, P54; protein-DNA complex, transcription/DNA complex; 2.58A {Homo sapiens} PDB: 3ri4_A 3mfk_A 1mdm_B
Probab=80.96 E-value=0.68 Score=41.90 Aligned_cols=76 Identities=20% Similarity=0.287 Sum_probs=54.6
Q ss_pred CCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhcccc-cccCcCCchhhhhccccccce----eecCCCcee
Q 015655 10 SLPPFLAKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYGFR----KVDPEQWEF 84 (403)
Q Consensus 10 ~~~~Fl~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YGF~----Kv~~~~~eF 84 (403)
+......=|.++|.|+...++|+|...+..|.+.|+++.++.--. |-=...||.-.-|-|..|-=+ |+...+..|
T Consensus 63 g~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~GkrlvY 142 (171)
T 2nny_A 63 GPIQLWQFLLELLTDKSSQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVY 142 (171)
T ss_dssp SSCCHHHHHHHHHTCTGGGGTCEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGTTTSEEECTTSTTEE
T ss_pred CceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEeecCCCeEEE
Confidence 445566667888999999999999999999999999888874222 112356788888888887543 444444555
Q ss_pred c
Q 015655 85 A 85 (403)
Q Consensus 85 ~ 85 (403)
.
T Consensus 143 ~ 143 (171)
T 2nny_A 143 R 143 (171)
T ss_dssp E
T ss_pred E
Confidence 4
No 16
>3jtg_A ETS-related transcription factor ELF-3; ELF3, protein-DNA complex, type II TGF-beta receptor, activa alternative splicing, cytoplasm; HET: DNA; 2.20A {Mus musculus} SCOP: a.4.5.21
Probab=78.86 E-value=0.51 Score=39.44 Aligned_cols=73 Identities=11% Similarity=0.156 Sum_probs=48.8
Q ss_pred cHHHHHHHhccCCC-CCCceEEcCC-CCeEEEECCcchhhcccc-cccCcCCchhhhhccccccc----eeecCCCceec
Q 015655 13 PFLAKTYEMVDDSS-TDLTVSWSSS-NKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYGF----RKVDPEQWEFA 85 (403)
Q Consensus 13 ~Fl~KLy~mved~~-~~~iI~Ws~~-G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YGF----~Kv~~~~~eF~ 85 (403)
....=|.++|.|++ ..++|+|.+. ..-|.+.|++..++.--. +-=...||..+-|-|..|-= +|+......|.
T Consensus 6 ~LwqFL~~LL~d~~~~~~~I~W~~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYy~~~ii~Kv~G~r~vY~ 85 (103)
T 3jtg_A 6 HLWEFIRDILIHPELNEGLMKWENRHEGVFKFLRSEAVAQLWGQKKKNSNMTYEKLSRAMRYYYKREILERVDGRRLVYK 85 (103)
T ss_dssp SHHHHHHHHHTCGGGCSSCEEEEETTTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHTTSBCCCTTCTTEEE
T ss_pred cHHHHHHHHHcCcccCCCccccccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCceEEEE
Confidence 34455678889987 6789999974 457999999888764211 11146789999999888732 44444444443
No 17
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=77.46 E-value=8.7 Score=30.71 Aligned_cols=44 Identities=23% Similarity=0.492 Sum_probs=28.8
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 127 QGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQL 170 (403)
Q Consensus 127 ~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~ 170 (403)
+.+..|+.+.+.++..+..+|+..+..++.|..+|..|++++..
T Consensus 27 Q~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~ee 70 (81)
T 1wt6_A 27 QSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMEL 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666666666666666666666666666666666553
No 18
>1yo5_C SAM pointed domain containing ETS transcription factor; protein-DNA complex, double helix, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.4.5.21
Probab=75.82 E-value=0.83 Score=37.79 Aligned_cols=68 Identities=13% Similarity=0.084 Sum_probs=48.7
Q ss_pred CCCCCCcHHHHHHHhccCCC-CCCceEEcC-CCCeEEEECCcchhhcccc-cccCcCCchhhhhccccccc
Q 015655 7 SSNSLPPFLAKTYEMVDDSS-TDLTVSWSS-SNKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYGF 74 (403)
Q Consensus 7 ~~~~~~~Fl~KLy~mved~~-~~~iI~Ws~-~G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YGF 74 (403)
++++......=|.++|.||+ +.++|+|.+ ++.-|.+.|+++.++.--. +-=...||...-|-|..|--
T Consensus 6 ~~~~~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~~~VArlWG~rKnkp~MnYeklSRaLRyYY~ 76 (97)
T 1yo5_C 6 LGSQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYK 76 (97)
T ss_dssp ---CCCCHHHHHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTT
T ss_pred CCCCeeEHHHHHHHHhcCcccCCCceEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHh
Confidence 34456667778889999986 589999984 5667999999887774222 22235789999999988854
No 19
>1hbx_G ETS-domain protein ELK-4; gene regulation, transcription complex; 3.15A {Homo sapiens} SCOP: a.4.5.21
Probab=75.79 E-value=0.85 Score=40.72 Aligned_cols=76 Identities=16% Similarity=0.271 Sum_probs=55.1
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEECCcchhhcccc-cccCcCCchhhhhccccccc----eeecCCCceec
Q 015655 11 LPPFLAKTYEMVDDSSTDLTVSWSSSNKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYGF----RKVDPEQWEFA 85 (403)
Q Consensus 11 ~~~Fl~KLy~mved~~~~~iI~Ws~~G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YGF----~Kv~~~~~eF~ 85 (403)
.-....=|.++|.|+.+.++|+|...+.-|.+.|+++.++.--. |-=...||...-|-|..|-= +|+...+..|.
T Consensus 5 ~i~LWqFLleLL~d~~~~~~I~Wt~~~geFklvdpe~VArLWG~rKnkp~MnYeKLSRALRyYY~k~Ii~KV~GqrlvYk 84 (157)
T 1hbx_G 5 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 84 (157)
T ss_dssp CCCHHHHTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSSCTTEEE
T ss_pred cccHHHHHHHHhcCcccCCceEEeCCCCEEEecCcHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEe
Confidence 33455667889999999999999987778999999888774222 12245789999999988742 45555556554
Q ss_pred c
Q 015655 86 N 86 (403)
Q Consensus 86 h 86 (403)
.
T Consensus 85 F 85 (157)
T 1hbx_G 85 F 85 (157)
T ss_dssp E
T ss_pred e
Confidence 4
No 20
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=75.55 E-value=15 Score=31.74 Aligned_cols=50 Identities=22% Similarity=0.196 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKM 178 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqm 178 (403)
+..+++.+.++...|..||..++.+...+..++..+++++..++.+..++
T Consensus 80 L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~l 129 (138)
T 3hnw_A 80 LSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKL 129 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444445555555544444445555555555555444444333
No 21
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=74.08 E-value=30 Score=27.57 Aligned_cols=55 Identities=11% Similarity=0.230 Sum_probs=34.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGFESQMQL-------LRERFQLMEQRQQKMVSFV 182 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~-------L~erl~~~Eq~Qqqml~fL 182 (403)
.|+.+|..+=.....|..|+..|++++..+..+.+. |.+......+.+...-.-|
T Consensus 10 qLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl 71 (81)
T 2jee_A 10 KLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERL 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666667777777777777777777766 5555555554443333333
No 22
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=71.26 E-value=7.5 Score=30.93 Aligned_cols=25 Identities=12% Similarity=0.147 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 142 ILLLELQRHEQERQGFESQMQLLRE 166 (403)
Q Consensus 142 ~L~~EL~rlrqqqq~l~~qvq~L~e 166 (403)
.|..+|..-+.++..+..+++.+-+
T Consensus 31 ~le~~Le~s~~~q~~~~~Elk~l~e 55 (79)
T 3cvf_A 31 AMERSLEEARAERERARAEVGRAAQ 55 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333344443333
No 23
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=71.22 E-value=26 Score=29.58 Aligned_cols=43 Identities=14% Similarity=0.226 Sum_probs=33.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQL 170 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~ 170 (403)
....+|..|++....|..||..++.+...++..+..++.++..
T Consensus 33 ~~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~ 75 (129)
T 3tnu_B 33 NTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGEL 75 (129)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3467788888888888888888888888888888777777654
No 24
>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus}
Probab=73.66 E-value=0.85 Score=39.48 Aligned_cols=58 Identities=22% Similarity=0.367 Sum_probs=39.9
Q ss_pred HHHHHhccCCCCCCceEEcCC-CCeEEEECCcchhhcccc-cccCcCCchhhhhcccccc
Q 015655 16 AKTYEMVDDSSTDLTVSWSSS-NKSFIVWNPPDFARDLLP-KYFKHNNFSSFIRQLNTYG 73 (403)
Q Consensus 16 ~KLy~mved~~~~~iI~Ws~~-G~sFiI~d~~~F~~~VLP-kyFkh~nfsSFvRQLN~YG 73 (403)
.=|.++|.|+.+.++|+|... +.-|.+.|++..++.--. |-=...||.-.-|-|..|.
T Consensus 9 qFLleLL~d~~~~~~I~Wt~k~~geFklvdpe~VArlWG~rKnkp~MnYeKLSRALRyYY 68 (128)
T 2lf8_A 9 DYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYY 68 (128)
Confidence 446788999999999999874 447999999876663221 1112356777777776663
No 25
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=69.27 E-value=9.2 Score=28.02 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 131 DDIERLKKEKEILLLELQRHEQERQGFES 159 (403)
Q Consensus 131 ~eIe~LK~d~~~L~~EL~rlrqqqq~l~~ 159 (403)
.+++.|+.++..|..++..|+++++.+..
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666665555555555555444433
No 26
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=68.88 E-value=31 Score=27.46 Aligned_cols=50 Identities=12% Similarity=0.140 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015655 139 EKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKMVSFVGRALQK 188 (403)
Q Consensus 139 d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vlq~ 188 (403)
-...|...|..|+++...|..++..+.-.+..+.++|+.+..=|-+.+..
T Consensus 21 ~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD~Rl~~ 70 (83)
T 2xdj_A 21 LLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSG 70 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34556667777777777777777777777888888888887766655544
No 27
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=67.79 E-value=30 Score=28.03 Aligned_cols=49 Identities=20% Similarity=0.386 Sum_probs=40.1
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 125 ERQGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQ 173 (403)
Q Consensus 125 e~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq 173 (403)
+...+..++..|+.+-..|..||..+..+...+..++..++.......+
T Consensus 5 ~~~~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~ 53 (96)
T 3q8t_A 5 DSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQ 53 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 3466788899999999999999999999999998888888876665543
No 28
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=67.28 E-value=8.1 Score=26.10 Aligned_cols=28 Identities=11% Similarity=0.277 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 137 KKEKEILLLELQRHEQERQGFESQMQLL 164 (403)
Q Consensus 137 K~d~~~L~~EL~rlrqqqq~l~~qvq~L 164 (403)
++.+.+..+++..|+.++..|+.|+..|
T Consensus 6 RrKn~a~qqDIddlkrQN~~Le~Qir~l 33 (34)
T 1a93_B 6 RRKNDTHQQDIDDLKRQNALLEQQVRAL 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhHhhHHHHHHHHHHHHHHHHhc
Confidence 4445555555555555655555555443
No 29
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=66.85 E-value=11 Score=27.93 Aligned_cols=30 Identities=20% Similarity=0.154 Sum_probs=17.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGF 157 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l 157 (403)
.|+.+++.|..++..|..++..|+.+...+
T Consensus 26 ~Le~~~~~L~~~n~~L~~~i~~L~~e~~~L 55 (61)
T 1t2k_D 26 SLEKKAEDLSSLNGQLQSEVTLLRNEVAQL 55 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355556666666666666665555554444
No 30
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=66.53 E-value=23 Score=27.62 Aligned_cols=20 Identities=15% Similarity=0.380 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 015655 153 ERQGFESQMQLLRERFQLME 172 (403)
Q Consensus 153 qqq~l~~qvq~L~erl~~~E 172 (403)
.++.++.+|+.|+.+|....
T Consensus 15 ~N~~Le~~v~~le~~Le~s~ 34 (72)
T 3cve_A 15 RNKDLEGQLSEMEQRLEKSQ 34 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333
No 31
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=65.64 E-value=13 Score=27.72 Aligned_cols=29 Identities=24% Similarity=0.388 Sum_probs=15.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQG 156 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~ 156 (403)
.|..+++.|..++..|..++..|+.+...
T Consensus 27 ~Le~~v~~L~~~n~~L~~ei~~L~~e~~~ 55 (63)
T 2wt7_A 27 TLQAETDQLEDEKSALQTEIANLLKEKEK 55 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555555655555555555555444433
No 32
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=65.64 E-value=13 Score=30.24 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 130 KDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQL 170 (403)
Q Consensus 130 ~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~ 170 (403)
.+++..|..++..|..|+..|++++..+..++..++.++..
T Consensus 47 ~~q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~ 87 (90)
T 2wt7_B 47 VQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666777777888888888888888777777777777653
No 33
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=65.39 E-value=9.9 Score=29.74 Aligned_cols=52 Identities=27% Similarity=0.462 Sum_probs=39.3
Q ss_pred chhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 122 TESERQGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQ 173 (403)
Q Consensus 122 ~~~e~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq 173 (403)
+.+|..++..+|+.|+.-+..+...|..++|+-..++..+..++.|+..++.
T Consensus 19 a~sEI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~i~~rle~~qe 70 (72)
T 2xu6_A 19 TMSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQIDDRLDFLEE 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 4457778889999999999999999999999999999999888888765543
No 34
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=64.73 E-value=8.9 Score=30.34 Aligned_cols=41 Identities=27% Similarity=0.368 Sum_probs=19.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERF 168 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl 168 (403)
.|..+++.|-.++..|..|+..+++-...++.++..|++.+
T Consensus 34 DLI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~elEeEl 74 (77)
T 2w83_C 34 DLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELEEEL 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666666666666665555555544444444433
No 35
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=64.71 E-value=44 Score=28.83 Aligned_cols=48 Identities=10% Similarity=0.018 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 131 DDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKM 178 (403)
Q Consensus 131 ~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqm 178 (403)
.+++.|..+...+..|+..|+.+...+..++..+++.+.....+.+.+
T Consensus 75 ~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l 122 (138)
T 3hnw_A 75 KMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKY 122 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333334444444443333333333333333333333333
No 36
>1pue_E Protein (transcription factor PU.1 (TF PU.1)); complex (transcription regulating/DNA), oncogene, transforming protein, DNA- binding, activator; HET: DNA; 2.10A {Mus musculus} SCOP: a.4.5.21
Probab=64.49 E-value=2 Score=34.91 Aligned_cols=58 Identities=14% Similarity=0.259 Sum_probs=40.9
Q ss_pred HHHHHhccCCCCCCceEEcCCC-CeEEEE--CCcchhhccccc--ccCcCCchhhhhcccccc
Q 015655 16 AKTYEMVDDSSTDLTVSWSSSN-KSFIVW--NPPDFARDLLPK--YFKHNNFSSFIRQLNTYG 73 (403)
Q Consensus 16 ~KLy~mved~~~~~iI~Ws~~G-~sFiI~--d~~~F~~~VLPk--yFkh~nfsSFvRQLN~YG 73 (403)
.=|.++|.|+++.++|+|...+ .-|-+. |+++.++.=-.+ -=+..||...-|-|..|.
T Consensus 6 qFL~~LL~d~~~~~~I~W~~~~~g~Fk~~~~~~e~VArlWG~rK~Nk~~MnYeKlSRaLRyYY 68 (89)
T 1pue_E 6 QFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYG 68 (89)
T ss_dssp HHHHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCcccCCceEeecCCCcEEEEecCChHHHHHHhhcccCCCCCcCHHHHHHHHHHHH
Confidence 3467889999999999998643 558775 677777642221 123678888989888874
No 37
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=64.14 E-value=25 Score=29.73 Aligned_cols=41 Identities=22% Similarity=0.354 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQ 169 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~ 169 (403)
...+|..|++....|..||..++.+...++..+..++.++.
T Consensus 36 ~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~ 76 (131)
T 3tnu_A 36 GKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYC 76 (131)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 34556666666666666666666666666666666655544
No 38
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=63.93 E-value=19 Score=36.17 Aligned_cols=55 Identities=16% Similarity=0.108 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015655 132 DIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKMVSFVGRAL 186 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vl 186 (403)
+|+.|+.+...|..++..++++.+.++.++..+.+++...+..-+++.+-|..+-
T Consensus 4 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elk 58 (403)
T 4etp_A 4 KIAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELR 58 (403)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3444555555555555666666666667777777777777777777777666643
No 39
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=61.75 E-value=12 Score=24.47 Aligned_cols=23 Identities=39% Similarity=0.495 Sum_probs=10.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHE 151 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlr 151 (403)
+..||..||++...|.-|+..|+
T Consensus 7 lkqeiaalkkeiaalkfeiaalk 29 (33)
T 4dzn_A 7 LKQEIAALKKEIAALKFEIAALK 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444443
No 40
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=61.23 E-value=33 Score=35.01 Aligned_cols=26 Identities=27% Similarity=0.300 Sum_probs=12.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQER 154 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqq 154 (403)
+..++..++.+...+..++++++++.
T Consensus 507 l~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (597)
T 3oja_B 507 LNKVFTHLKERQAFKLRETQARRTEA 532 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhh
Confidence 44444445544444444444444433
No 41
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=60.54 E-value=55 Score=28.98 Aligned_cols=33 Identities=9% Similarity=0.210 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 148 QRHEQERQGFESQMQLLRERFQLMEQRQQKMVS 180 (403)
Q Consensus 148 ~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~ 180 (403)
..++.++..+..|+..+++++..++...+.++.
T Consensus 99 e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~ 131 (152)
T 3a7p_A 99 ERLNAALISGTIENNVLQQKLSDLKKEHSQLVA 131 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555666666666655555553
No 42
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=60.29 E-value=16 Score=26.71 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=20.5
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 123 ESERQGLKDDIERLKKEKEILLLELQRHEQER 154 (403)
Q Consensus 123 ~~e~~~l~~eIe~LK~d~~~L~~EL~rlrqqq 154 (403)
..+...|..|+..||.....|..++..++.+.
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666677777777777777766666543
No 43
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=60.02 E-value=22 Score=24.87 Aligned_cols=10 Identities=50% Similarity=0.823 Sum_probs=4.7
Q ss_pred hHHHHHHHHH
Q 015655 129 LKDDIERLKK 138 (403)
Q Consensus 129 l~~eIe~LK~ 138 (403)
+..++..||+
T Consensus 5 lkselqalkk 14 (48)
T 1g6u_A 5 LKSELQALKK 14 (48)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444555543
No 44
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=57.42 E-value=44 Score=31.10 Aligned_cols=8 Identities=38% Similarity=0.833 Sum_probs=4.6
Q ss_pred HHHHHHHH
Q 015655 255 TFWENIVQ 262 (403)
Q Consensus 255 ~~~E~~~~ 262 (403)
.++|.+..
T Consensus 179 ~~Yerir~ 186 (256)
T 3na7_A 179 SFYERIRR 186 (256)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55566654
No 45
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=56.05 E-value=86 Score=26.28 Aligned_cols=43 Identities=9% Similarity=0.153 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 141 EILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKMVSFVG 183 (403)
Q Consensus 141 ~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~ 183 (403)
..|..||..++..+..+...+..|+......|..-....+.|.
T Consensus 38 ~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLe 80 (111)
T 2v66_B 38 SVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLE 80 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHH
Confidence 3455555555555555555555555555555544444444433
No 46
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=55.64 E-value=15 Score=25.01 Aligned_cols=26 Identities=27% Similarity=0.281 Sum_probs=20.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQE 153 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqq 153 (403)
+|++.++.|...+..|..|+.||+.-
T Consensus 5 QLE~KVEeLl~~~~~Le~eV~RLk~l 30 (36)
T 1kd8_B 5 QLKAKVEELKSKLWHLKNKVARLKKK 30 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 47788888888888888888887654
No 47
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=55.34 E-value=49 Score=34.30 Aligned_cols=96 Identities=18% Similarity=0.217 Sum_probs=62.4
Q ss_pred CccccCccccc-ccccccCCCCCCCCCCCCCCCCCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHH-----------HH
Q 015655 87 EDFVRGQPERL-KNIHRRKPVHSHSNQNLHGQGTPLTESERQGLKDDIERLKKEKEILLLELQRHEQ-----------ER 154 (403)
Q Consensus 87 ~~F~Rg~~~lL-~~IkRkkp~~s~s~~~~~~q~~~l~~~e~~~l~~eIe~LK~d~~~L~~EL~rlrq-----------qq 154 (403)
-.|.|.+++.+ .++++|.-... ..... .-...+.++..+..+++.|+.+++.+..++..++. +.
T Consensus 43 ~~~ir~n~~~v~~~l~~R~~~~~--~~~~~--~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~ 118 (501)
T 1wle_A 43 MESLCAYPEDAARALDLRKGELR--SKDLP--GIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQY 118 (501)
T ss_dssp HHHHHHSHHHHHHHHHHHTCSCC--GGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHH
T ss_pred HHHHHhCHHHHHHHHHHcCCCcc--hhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccH
Confidence 35666778775 56666542100 00000 00012345678899999999999999999887653 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015655 155 QGFESQMQLLRERFQLMEQRQQKMVSFVGRAL 186 (403)
Q Consensus 155 q~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vl 186 (403)
..+..++..|++++..++.....+-.-|..++
T Consensus 119 ~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~l 150 (501)
T 1wle_A 119 QSLRARGREIRKQLTLLYPKEAQLEEQFYLRA 150 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888899999888888777777665544
No 48
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=54.97 E-value=10 Score=28.22 Aligned_cols=30 Identities=13% Similarity=0.195 Sum_probs=17.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGF 157 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l 157 (403)
.|+.+++.|..++..|..++..|+.+...|
T Consensus 26 ~Le~~v~~L~~~n~~L~~~v~~L~~e~~~L 55 (62)
T 1jnm_A 26 RLEEKVKTLKAQNSELASTANMLREQVAQL 55 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666666666666666666655554443
No 49
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=54.30 E-value=17 Score=24.38 Aligned_cols=25 Identities=24% Similarity=0.233 Sum_probs=20.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQ 152 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrq 152 (403)
+++++++.|-.++..|..|+.||+.
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4788888888888888888888764
No 50
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=53.70 E-value=24 Score=26.41 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQER 154 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqq 154 (403)
+..+++.|+.++..|..++..|+.+.
T Consensus 28 le~~~~~L~~~N~~L~~~i~~L~~E~ 53 (63)
T 1ci6_A 28 LTGECKELEKKNEALKERADSLAKEI 53 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555554444443
No 51
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=53.26 E-value=30 Score=32.48 Aligned_cols=21 Identities=10% Similarity=0.240 Sum_probs=0.0
Q ss_pred cee--ccCccccCcccccccccc
Q 015655 82 WEF--ANEDFVRGQPERLKNIHR 102 (403)
Q Consensus 82 ~eF--~h~~F~Rg~~~lL~~IkR 102 (403)
-+| .||.|--.+++||..++=
T Consensus 37 ~~yL~~~PdFf~~~~~Ll~~L~l 59 (252)
T 3e98_A 37 AAYLSQHPEFFVEHDELIPELRI 59 (252)
T ss_dssp -----------------------
T ss_pred HHHHHhCCHHHhhCHHHHHhCCC
Confidence 355 899999999999998864
No 52
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=51.46 E-value=55 Score=24.33 Aligned_cols=35 Identities=23% Similarity=0.220 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 131 DDIERLKKEKEILLLELQRHEQERQGFESQMQLLR 165 (403)
Q Consensus 131 ~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~ 165 (403)
.++.+||.-+..|...++.|+.+....++++..|.
T Consensus 11 ~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~ 45 (58)
T 3a2a_A 11 RQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLN 45 (58)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888888888888877776665555554443
No 53
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=51.42 E-value=27 Score=33.13 Aligned_cols=40 Identities=25% Similarity=0.455 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERF 168 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl 168 (403)
+..+|+.|+.-+..+...|..++++--.|+..+..+++|+
T Consensus 182 ID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~Ri 221 (242)
T 3uux_B 182 IEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRL 221 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444444444444444443
No 54
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=51.38 E-value=54 Score=33.38 Aligned_cols=28 Identities=25% Similarity=0.246 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 145 LELQRHEQERQGFESQMQLLRERFQLME 172 (403)
Q Consensus 145 ~EL~rlrqqqq~l~~qvq~L~erl~~~E 172 (403)
.++..++++...++.++...++++..+.
T Consensus 537 ~~~~~~~~~~~~le~~~~~~~~~~~~l~ 564 (597)
T 3oja_B 537 KETEDLEQENIALEKQLDNKRAKQAELR 564 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHhhhHHHHHHHhhhhhHHHHHH
Confidence 3333333333333333333333333333
No 55
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=50.48 E-value=39 Score=34.46 Aligned_cols=65 Identities=14% Similarity=0.264 Sum_probs=48.7
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015655 123 ESERQGLKDDIERLKKEKEILLLELQRHEQE---RQGFESQMQLLRERFQLMEQRQQKMVSFVGRALQ 187 (403)
Q Consensus 123 ~~e~~~l~~eIe~LK~d~~~L~~EL~rlrqq---qq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vlq 187 (403)
+.++..+..+++.|+.+++.+..++..++.. ...+..++..|++++..++.....+-.-|..++-
T Consensus 37 ~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (455)
T 2dq0_A 37 DTEWRTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYLW 104 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457788999999999999999998865432 3456777888888888888777777766666543
No 56
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=49.32 E-value=34 Score=23.24 Aligned_cols=27 Identities=30% Similarity=0.352 Sum_probs=20.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQER 154 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqq 154 (403)
+|+++++.|-.++..|..|+.||+.-.
T Consensus 5 QLE~kVEeLl~~~~~Le~EV~RL~~ll 31 (36)
T 1kd8_A 5 QLEAEVEEIESEVWHLENEVARLEKEN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 477888888888888888888776543
No 57
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=48.05 E-value=24 Score=23.57 Aligned_cols=25 Identities=8% Similarity=0.102 Sum_probs=19.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQ 152 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrq 152 (403)
+++++++.|-.++..|..|+.+|+.
T Consensus 4 QLEdKvEeLl~~~~~Le~EV~RLk~ 28 (33)
T 3c3g_A 4 XIEXKLXEIXSKXYHXENXLARIKX 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4678888888888888888887764
No 58
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=48.03 E-value=46 Score=21.62 Aligned_cols=28 Identities=25% Similarity=0.388 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 132 DIERLKKEKEILLLELQRHEQERQGFESQMQLLRE 166 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~e 166 (403)
||..||.+...|..|+.. +.-++.+|++
T Consensus 3 eiaalkqeiaalkkeiaa-------lkfeiaalkq 30 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAA-------LKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH-------HHHHHHHHHc
Confidence 556666655555555544 4455555544
No 59
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=47.77 E-value=20 Score=27.89 Aligned_cols=31 Identities=10% Similarity=0.237 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 132 DIERLKKEKEILLLELQRHEQERQGFESQMQ 162 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq 162 (403)
-|..|+.....|..|+..|++++..+..++.
T Consensus 48 YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~ 78 (83)
T 1nkp_B 48 YIQYMRRKNHTHQQDIDDLKRQNALLEQQVR 78 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555555555555555555555544444
No 60
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=47.46 E-value=25 Score=23.50 Aligned_cols=25 Identities=24% Similarity=0.202 Sum_probs=20.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQ 152 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrq 152 (403)
+|+++++.|-..+..|..|+.+++.
T Consensus 4 QLEdKVEell~~~~~le~EV~Rl~~ 28 (33)
T 2wq1_A 4 QLEDKIEENTSKIYHNTNEIARNTK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4778888888888888888888764
No 61
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=47.36 E-value=27 Score=28.06 Aligned_cols=28 Identities=7% Similarity=0.127 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 142 ILLLELQRHEQERQGFESQMQLLRERFQ 169 (403)
Q Consensus 142 ~L~~EL~rlrqqqq~l~~qvq~L~erl~ 169 (403)
.+..++..|++++..|..++..|+..+.
T Consensus 40 e~~~r~~~Le~EN~~Lr~~v~~L~~E~~ 67 (87)
T 1hjb_A 40 ETQHKVLELTAENERLQKKVEQLSRELS 67 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555555554443
No 62
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=47.05 E-value=35 Score=26.73 Aligned_cols=44 Identities=11% Similarity=0.024 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLME 172 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~E 172 (403)
|+.++.-+..-...|...|.++.++...+..++..|.+|+..++
T Consensus 19 LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~ 62 (78)
T 3efg_A 19 LETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVR 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444444555555555555555556666666665555443
No 63
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=46.81 E-value=60 Score=33.63 Aligned_cols=72 Identities=10% Similarity=0.099 Sum_probs=51.0
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcchhh
Q 015655 123 ESERQGLKDDIERLKKEKEILLLELQRHEQE---RQGFESQMQLLRERFQLMEQRQQKMVSFVGRAL-QKPGLESN 194 (403)
Q Consensus 123 ~~e~~~l~~eIe~LK~d~~~L~~EL~rlrqq---qq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vl-q~P~f~~~ 194 (403)
+.++..+..+++.|+.+++.+..++..++.. ...+..++..|++++..++.....+-.-|..++ .=|-+.+.
T Consensus 39 d~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~l~~iPN~~~~ 114 (485)
T 3qne_A 39 YKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHE 114 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 3456788899999999999999988776543 345667788888888888877777766665443 32444443
No 64
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=46.80 E-value=27 Score=27.80 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 130 KDDIERLKKEKEILLLELQRHEQERQGFESQMQLL 164 (403)
Q Consensus 130 ~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L 164 (403)
.+-|..|+.....|..++..|+++++.|..+++.|
T Consensus 51 ~~YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 51 TAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34466666666667777766666666666666554
No 65
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=46.77 E-value=1.3e+02 Score=25.34 Aligned_cols=27 Identities=33% Similarity=0.303 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 130 KDDIERLKKEKEILLLELQRHEQERQG 156 (403)
Q Consensus 130 ~~eIe~LK~d~~~L~~EL~rlrqqqq~ 156 (403)
...|+.|+++...|..||.+++.+.+.
T Consensus 14 D~~Ie~Lkreie~lk~ele~l~~E~q~ 40 (120)
T 3i00_A 14 DHLIERLYREISGLKAQLENMKTESQR 40 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356788888888888888877766543
No 66
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=46.43 E-value=82 Score=26.26 Aligned_cols=11 Identities=9% Similarity=0.123 Sum_probs=4.3
Q ss_pred HHHHHHHHHHH
Q 015655 167 RFQLMEQRQQK 177 (403)
Q Consensus 167 rl~~~Eq~Qqq 177 (403)
+|+.+|--.|.
T Consensus 47 KLRdIEiLcQe 57 (106)
T 4e61_A 47 KLRDIEILVHT 57 (106)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444433333
No 67
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=46.36 E-value=1.1e+02 Score=25.69 Aligned_cols=52 Identities=23% Similarity=0.254 Sum_probs=36.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKMV 179 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml 179 (403)
.|..+|..|+..+..|..-|..|+|.+-.++.+-.+...-|..+|.+-.+.+
T Consensus 39 ~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~ai 90 (111)
T 2v66_B 39 VLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAI 90 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4677777777777777777777777777777776666666666665544443
No 68
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=45.40 E-value=59 Score=32.57 Aligned_cols=53 Identities=15% Similarity=0.156 Sum_probs=35.1
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 126 RQGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKM 178 (403)
Q Consensus 126 ~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqm 178 (403)
...+..+|..|+++...|..++..++.+.+.+..++...+..-+.++...+.|
T Consensus 5 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~el 57 (403)
T 4etp_A 5 IAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQEL 57 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34567777777777777777777777777777777666555444444444444
No 69
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=45.40 E-value=34 Score=29.13 Aligned_cols=16 Identities=19% Similarity=0.302 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 015655 147 LQRHEQERQGFESQMQ 162 (403)
Q Consensus 147 L~rlrqqqq~l~~qvq 162 (403)
++.|+-+.+.+..+++
T Consensus 73 vqeLqgEI~~Lnq~Lq 88 (121)
T 3mq7_A 73 VEELEGEITTLNHKLQ 88 (121)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 70
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=45.04 E-value=28 Score=23.35 Aligned_cols=25 Identities=12% Similarity=0.078 Sum_probs=19.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQ 152 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrq 152 (403)
+++++++.|-.++..|..|+.+|+.
T Consensus 5 QLEdKVEeLl~~~~~Le~EV~RLk~ 29 (34)
T 3c3f_A 5 QIEXKLEXILSXLYHXENEXARIXK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 4677888888888888888887764
No 71
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=44.79 E-value=24 Score=27.27 Aligned_cols=10 Identities=20% Similarity=0.292 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 015655 130 KDDIERLKKE 139 (403)
Q Consensus 130 ~~eIe~LK~d 139 (403)
+.+|..|...
T Consensus 35 E~~v~~le~~ 44 (70)
T 1gd2_E 35 ETQVVTLKEL 44 (70)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 72
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=44.43 E-value=29 Score=23.33 Aligned_cols=25 Identities=20% Similarity=0.166 Sum_probs=19.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQ 152 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrq 152 (403)
+++++++.|-..+..|..|+.||+.
T Consensus 5 QLEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 5 QIEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4678888888888888888888764
No 73
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=44.13 E-value=63 Score=32.55 Aligned_cols=55 Identities=13% Similarity=0.185 Sum_probs=32.4
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015655 125 ERQGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKMVSFVGRAL 186 (403)
Q Consensus 125 e~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vl 186 (403)
|+..|..++..|++....|..++..+ ..++..++++|...+..-+++.+-|..+-
T Consensus 4 ~~~~l~~el~~~~~~~~~l~~~~~~~-------~~~~~~~~~~l~~~~~~rr~l~n~~~~l~ 58 (412)
T 3u06_A 4 MHAALSTEVVHLRQRTEELLRCNEQQ-------AAELETCKEQLFQSNMERKELHNTVMDLR 58 (412)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45566666766666665555555544 44455556666665555566666665543
No 74
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=43.04 E-value=90 Score=29.25 Aligned_cols=52 Identities=19% Similarity=0.252 Sum_probs=41.1
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 126 RQGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQK 177 (403)
Q Consensus 126 ~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqq 177 (403)
+.-+...+..+|.+...|...|++.+.+...+..++...++.+.....+-.+
T Consensus 166 k~yLa~R~~~lK~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~~~~~~ 217 (228)
T 3q0x_A 166 KQFLAFRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDK 217 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4557788899999999999999999888888888888888777666555443
No 75
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=42.88 E-value=75 Score=29.05 Aligned_cols=37 Identities=19% Similarity=0.295 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 133 IERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQ 169 (403)
Q Consensus 133 Ie~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~ 169 (403)
|..|..++..|..+|....++.+.++.|++.++++..
T Consensus 22 V~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~ 58 (190)
T 4emc_A 22 VANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVK 58 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4455555555555555555555555555555555443
No 76
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=42.78 E-value=1.2e+02 Score=23.60 Aligned_cols=59 Identities=14% Similarity=0.218 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015655 130 KDDIERLKKEKEILLLELQRHEQERQGFE-------SQMQLLRERFQLMEQRQQKMVSFVGRALQK 188 (403)
Q Consensus 130 ~~eIe~LK~d~~~L~~EL~rlrqqqq~l~-------~qvq~L~erl~~~Eq~Qqqml~fL~~vlq~ 188 (403)
...|+.|..++..|...+..+.++.+.+. .....++..|..=.--=++-++.|+-+|..
T Consensus 3 ~k~v~~l~~E~eel~~klk~~~ee~~~~~eee~~~~~~k~~lek~L~~E~~LK~QAVNKLAEIMNR 68 (71)
T 1uix_A 3 TSDVANLANEKEELNNKLKEAQEQLSRLKDEEISAAAIKAQFEKQLLTERTLKTQAVNKLAEIMNR 68 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44555555555555555555444433322 222233433332222335677888888764
No 77
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=42.53 E-value=44 Score=33.65 Aligned_cols=72 Identities=17% Similarity=0.211 Sum_probs=48.7
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcchhh
Q 015655 123 ESERQGLKDDIERLKKEKEILLLELQR-HEQERQGFESQMQLLRERFQLMEQRQQKMVSFVGRAL-QKPGLESN 194 (403)
Q Consensus 123 ~~e~~~l~~eIe~LK~d~~~L~~EL~r-lrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vl-q~P~f~~~ 194 (403)
+.++..+..+++.|+.+++.+..++.. -.++...+..++..+++++..++.....+-.-|..++ .=|-+.+.
T Consensus 34 ~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~~~~ 107 (421)
T 1ses_A 34 DREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLEALLLQVPLPPWP 107 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 345677888999999999988888763 2234455667777888888877777777666665443 33444443
No 78
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=42.08 E-value=59 Score=31.94 Aligned_cols=11 Identities=18% Similarity=0.389 Sum_probs=7.7
Q ss_pred HHHHHHHHhhh
Q 015655 256 FWENIVQDVGQ 266 (403)
Q Consensus 256 ~~E~~~~~~~~ 266 (403)
-|+++-.+.|.
T Consensus 129 ~W~~Yk~GFG~ 139 (323)
T 1lwu_C 129 DWVSYREGFGY 139 (323)
T ss_dssp CHHHHHHCEEE
T ss_pred CHHHHhhhhCC
Confidence 37888877764
No 79
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=41.89 E-value=81 Score=25.27 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQL 170 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~ 170 (403)
..+-+..|+.....+..++.++..+...+..++..++..|+.
T Consensus 68 ~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~~ 109 (117)
T 2zqm_A 68 KDKAVAELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQS 109 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777777778888877777777777777777666653
No 80
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=41.56 E-value=34 Score=22.96 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=20.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQ 152 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrq 152 (403)
+|++.++.|-..+..|..|+.||+.
T Consensus 5 QLEdkVEeLl~~~~~Le~eV~RL~~ 29 (34)
T 2hy6_A 5 QLADAVEELASANYHLANAVARLAK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4778888888888888888888764
No 81
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=41.46 E-value=34 Score=22.97 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=20.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQ 152 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrq 152 (403)
+++++++.|-..+..|..|+.||+.
T Consensus 5 QLEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 5 QIEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHH
Confidence 4778888888888888888888764
No 82
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=41.43 E-value=1.2e+02 Score=23.47 Aligned_cols=62 Identities=18% Similarity=0.285 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQ-MQ----LLRERFQLMEQRQQKMVSFVGRALQKPG 190 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~q-vq----~L~erl~~~Eq~Qqqml~fL~~vlq~P~ 190 (403)
|...|+.|..++..|...+..+.++...+..+ +. .++..|..=.--=++-++.|+-+|...+
T Consensus 4 L~k~i~~l~~E~eel~~klk~~~ee~~~~~eee~~~~~~~lek~L~~E~~LK~QAVNKLAEIMNRKd 70 (71)
T 1s1c_X 4 LTKDIEILRRENEELTEKMKKAEEEYKLEKEEEISNLKAAFEKNINTERTLKTQAVNKLAEIMNRKD 70 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 45566666666666666665555544433222 22 3333333222233567788888886543
No 83
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=41.02 E-value=1.3e+02 Score=23.73 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 149 RHEQERQGFESQMQLLRERFQLMEQRQQKMVSFV 182 (403)
Q Consensus 149 rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL 182 (403)
.|.++...+..++..|+-.++.......+|..-.
T Consensus 24 ~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQ 57 (83)
T 2xdj_A 24 QLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQ 57 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3444444555555555555554444444444433
No 84
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=40.90 E-value=80 Score=31.79 Aligned_cols=28 Identities=21% Similarity=0.220 Sum_probs=13.4
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 126 RQGLKDDIERLKKEKEILLLELQRHEQE 153 (403)
Q Consensus 126 ~~~l~~eIe~LK~d~~~L~~EL~rlrqq 153 (403)
...+.++++.|++....+..|+..++++
T Consensus 12 l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 39 (412)
T 3u06_A 12 VVHLRQRTEELLRCNEQQAAELETCKEQ 39 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555555555555544444
No 85
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=40.55 E-value=1.2e+02 Score=26.72 Aligned_cols=51 Identities=12% Similarity=0.157 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 130 KDDIERLKKEKEILLLELQRHE-------QERQGFESQMQLLRERFQLMEQRQQKMVS 180 (403)
Q Consensus 130 ~~eIe~LK~d~~~L~~EL~rlr-------qqqq~l~~qvq~L~erl~~~Eq~Qqqml~ 180 (403)
...|..|+.+...|..++..+. ...+.+..++.+|.-++..++.+.+++-.
T Consensus 67 ~~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~ 124 (152)
T 3a7p_A 67 LNTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKK 124 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555555 44556666666666666666666555543
No 86
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=40.31 E-value=23 Score=22.27 Aligned_cols=16 Identities=31% Similarity=0.403 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 015655 134 ERLKKEKEILLLELQR 149 (403)
Q Consensus 134 e~LK~d~~~L~~EL~r 149 (403)
.+||..+..|.+|+..
T Consensus 3 rrlkqknarlkqeiaa 18 (28)
T 3ra3_B 3 RRLKQKNARLKQEIAA 18 (28)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred hHHHHhhhHHHHHHHH
Confidence 3444444444444433
No 87
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=39.34 E-value=1.8e+02 Score=26.51 Aligned_cols=17 Identities=6% Similarity=0.147 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 015655 147 LQRHEQERQGFESQMQL 163 (403)
Q Consensus 147 L~rlrqqqq~l~~qvq~ 163 (403)
|..++..+..+..++..
T Consensus 97 l~~l~~~~~~l~~~ire 113 (189)
T 2v71_A 97 LSQTRAIKEQLHKYVRE 113 (189)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 88
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=39.15 E-value=1.2e+02 Score=24.20 Aligned_cols=41 Identities=15% Similarity=0.231 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 132 DIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLME 172 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~E 172 (403)
+-+.|+.-+..|..||...+++...++.++...+.+|..++
T Consensus 38 ekEqL~~LKkkl~~el~~h~~ei~~le~~i~rhk~~i~~l~ 78 (84)
T 1gmj_A 38 AKEQLAALKKHKENEISHHAKEIERLQKEIERHKQSIKKLK 78 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33444444445566777777776666666666666665554
No 89
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=38.95 E-value=40 Score=22.64 Aligned_cols=25 Identities=20% Similarity=0.280 Sum_probs=19.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQ 152 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrq 152 (403)
+|++.++.|-.++..|..|+.+|+.
T Consensus 5 QLE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 5 QLEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 4677888888888888888877764
No 90
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=38.76 E-value=1e+02 Score=21.91 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQ 173 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq 173 (403)
+++.+++|..-...|...+.+|--++... -+.|++|+..+|.
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ss---q~KlKqRit~lE~ 44 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNAT---QMKMKQRLSQLES 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHh
Confidence 56777888877888888888776665544 3345567666664
No 91
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=38.75 E-value=1.4e+02 Score=23.35 Aligned_cols=47 Identities=21% Similarity=0.388 Sum_probs=33.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQK 177 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqq 177 (403)
.++..+++|..-...|...+.||--++... -+.|++||..+|.+-+.
T Consensus 4 dlEEKv~~LE~sld~LQTrfARLLaEy~ss---Q~KLKqRit~LE~~~~~ 50 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTRFARILAEYESM---QQKLKQRLTKVEKFLKP 50 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcc
Confidence 467788888888888888888877666544 34566777777765544
No 92
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=38.36 E-value=1.8e+02 Score=24.42 Aligned_cols=44 Identities=25% Similarity=0.207 Sum_probs=24.3
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 127 QGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQ 173 (403)
Q Consensus 127 ~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq 173 (403)
..+..++.++..+...|...+. +.......+|+.|.++++..|+
T Consensus 16 ~ql~~qL~k~~~~r~~Le~~w~---~k~E~~k~qV~~L~~~~q~sE~ 59 (112)
T 1x79_B 16 RQANDQLEKTMKDKQELEDFIK---QSSEDSSHQISALVLRAQASEI 59 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555554433 3344455667777777666654
No 93
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=37.00 E-value=99 Score=27.40 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 131 DDIERLKKEKEILLLELQRHEQERQGFESQMQLLR 165 (403)
Q Consensus 131 ~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~ 165 (403)
.++++|+.++..+...+.+-+++.+.|..|..+++
T Consensus 5 qe~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~vafk 39 (155)
T 2aze_A 5 QECQNLEVERQRRLERIKQKQSQLQELILQQIAFK 39 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788888888888888877777777666655444
No 94
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=36.60 E-value=85 Score=30.79 Aligned_cols=10 Identities=40% Similarity=0.913 Sum_probs=5.1
Q ss_pred HHH---HHHHHHhh
Q 015655 255 TFW---ENIVQDVG 265 (403)
Q Consensus 255 ~~~---E~~~~~~~ 265 (403)
.|| |+| |.++
T Consensus 147 EfWLGle~i-h~LT 159 (323)
T 1lwu_C 147 EFWLGNEKI-HLLT 159 (323)
T ss_dssp CEECCHHHH-HHHH
T ss_pred cEEecccce-eccc
Confidence 566 554 3354
No 95
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=36.33 E-value=1e+02 Score=23.27 Aligned_cols=38 Identities=13% Similarity=0.206 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 135 RLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLME 172 (403)
Q Consensus 135 ~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~E 172 (403)
.+|+-..+-.+.++.|-+-+..+..++..|...++.++
T Consensus 17 evK~ALaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQ 54 (63)
T 2w6a_A 17 ELKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKLQ 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHH
Confidence 34444444445555555555555555554444444443
No 96
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=35.81 E-value=1.1e+02 Score=21.39 Aligned_cols=38 Identities=21% Similarity=0.294 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRE 166 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~e 166 (403)
++.++..|..+++.|...-..-+.-..-++.++..|+.
T Consensus 8 lenevaslenenetlkkknlhkkdliaylekeianlrk 45 (49)
T 3he5_A 8 LENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRK 45 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 44444444444444443332222223333444444443
No 97
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=35.42 E-value=1.1e+02 Score=22.80 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 140 KEILLLELQRHEQERQGFESQMQLLRERFQ 169 (403)
Q Consensus 140 ~~~L~~EL~rlrqqqq~l~~qvq~L~erl~ 169 (403)
...|..++..|++++..|..++..|+..+.
T Consensus 25 ~~~le~~~~~L~~~N~~L~~~i~~L~~E~~ 54 (63)
T 1ci6_A 25 QEALTGECKELEKKNEALKERADSLAKEIQ 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666666666666666666555543
No 98
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=34.92 E-value=1.1e+02 Score=23.91 Aligned_cols=47 Identities=9% Similarity=-0.026 Sum_probs=27.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQR 174 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~ 174 (403)
.++..|..|.-....+..-|..|.+.....+.++..|+.++..+..+
T Consensus 11 ~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~r 57 (78)
T 3efg_A 11 ELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLED 57 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36667777766666666656565555555555555555555444433
No 99
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=34.86 E-value=31 Score=25.86 Aligned_cols=28 Identities=11% Similarity=0.106 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 141 EILLLELQRHEQERQGFESQMQLLRERF 168 (403)
Q Consensus 141 ~~L~~EL~rlrqqqq~l~~qvq~L~erl 168 (403)
..|..++..|+.++..|..++..|++.|
T Consensus 33 ~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 33 KQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444554444433
No 100
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=34.80 E-value=51 Score=22.16 Aligned_cols=25 Identities=20% Similarity=0.169 Sum_probs=18.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQ 152 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrq 152 (403)
+++++++.|-.++..|..|+.|++.
T Consensus 5 QledKvEel~~~~~~l~nEv~Rl~~ 29 (34)
T 2r2v_A 5 QVADKLEEVASKLYHNANELARVAK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4677888887888888888877653
No 101
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=34.74 E-value=1.3e+02 Score=29.93 Aligned_cols=41 Identities=2% Similarity=-0.080 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 132 DIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLME 172 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~E 172 (403)
+.++++++...+..++++++++++.++..+..+...+..+.
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (487)
T 3oja_A 429 VQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASAN 469 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcc
Confidence 33334444444444444444444444444444444444333
No 102
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=34.71 E-value=1.3e+02 Score=31.11 Aligned_cols=74 Identities=9% Similarity=0.011 Sum_probs=49.0
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHHHHH---------------------------HHHHH----HHH-HHHHHHHHHH
Q 015655 123 ESERQGLKDDIERLKKEKEILLLELQRHEQ---------------------------ERQGF----ESQ-MQLLRERFQL 170 (403)
Q Consensus 123 ~~e~~~l~~eIe~LK~d~~~L~~EL~rlrq---------------------------qqq~l----~~q-vq~L~erl~~ 170 (403)
+.+++.+..+++.|+.+++.+..++..++. +.+.+ ..+ +..|++++..
T Consensus 43 d~~~r~~~~~~~~l~~~rN~~sk~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~i~~ 122 (484)
T 3lss_A 43 DKKWRRTQFLTEASKKLINICSKAVGAKKKAKEADGDTSEIPPQVKEAYENGTLKGEQVEQLCVLQLKQLSKDLSDQVAG 122 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----------------------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccchhhHHHhhHHHHHHHHHHHHHHHHH
Confidence 345778889999999999999988876554 12234 455 7788888888
Q ss_pred HHHHHHHHHHHHHHHh-cCCcchhhcc
Q 015655 171 MEQRQQKMVSFVGRAL-QKPGLESNFG 196 (403)
Q Consensus 171 ~Eq~Qqqml~fL~~vl-q~P~f~~~l~ 196 (403)
++.....+-.-|..++ .=|-+.+.-+
T Consensus 123 le~~~~~~~~~~~~~l~~iPN~~~~~v 149 (484)
T 3lss_A 123 LAKEAQQLEEERDKLMLNVGNILHESV 149 (484)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCTTS
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 8887777776665544 3344444333
No 103
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=34.55 E-value=1.3e+02 Score=21.90 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 140 KEILLLELQRHEQERQGFESQMQLLRERFQLM 171 (403)
Q Consensus 140 ~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~ 171 (403)
...|..++..|..++..|..++..|++.+..+
T Consensus 24 ~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~L 55 (61)
T 1t2k_D 24 VQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQL 55 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666666666666666666555433
No 104
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=34.46 E-value=2.3e+02 Score=25.86 Aligned_cols=49 Identities=10% Similarity=0.154 Sum_probs=36.7
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 126 RQGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQR 174 (403)
Q Consensus 126 ~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~ 174 (403)
...+..|+..|.........|+..|+.+.+.++.++.....++......
T Consensus 22 V~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~~~~~~~~~~~e~ 70 (190)
T 4emc_A 22 VANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQTSQQAEN 70 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHh
Confidence 4567778888888888888888888888888888887777777544433
No 105
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=34.14 E-value=89 Score=24.65 Aligned_cols=41 Identities=20% Similarity=0.238 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQ 169 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~ 169 (403)
..+-+..|......+..++.++..+...+..++..++..|+
T Consensus 63 ~~e~~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~ 103 (107)
T 1fxk_A 63 KDELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556677777777888888877777777777777776664
No 106
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=34.00 E-value=51 Score=25.76 Aligned_cols=31 Identities=13% Similarity=0.320 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 131 DDIERLKKEKEILLLELQRHEQERQGFESQM 161 (403)
Q Consensus 131 ~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qv 161 (403)
+=|..|+.....|..|...|+.++..+..++
T Consensus 47 ~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L 77 (80)
T 1nlw_A 47 LHIKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3355555555555555555555544444333
No 107
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=33.85 E-value=1.2e+02 Score=21.16 Aligned_cols=13 Identities=31% Similarity=0.613 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHHH
Q 015655 157 FESQMQLLRERFQ 169 (403)
Q Consensus 157 l~~qvq~L~erl~ 169 (403)
++.++|+|+.++.
T Consensus 25 leselqalekkla 37 (48)
T 1g6u_A 25 LESELQALEKKLA 37 (48)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333444443333
No 108
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=33.77 E-value=1.1e+02 Score=22.19 Aligned_cols=35 Identities=17% Similarity=0.286 Sum_probs=18.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGFESQMQ 162 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq 162 (403)
++..++..|...+..|...|...+++...+..+|.
T Consensus 13 ~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele 47 (51)
T 3m91_A 13 QLEARIDSLAARNSKLMETLKEARQQLLALREEVD 47 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556655566666665555555444444433
No 109
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=33.56 E-value=1.5e+02 Score=28.08 Aligned_cols=60 Identities=15% Similarity=0.163 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchh
Q 015655 134 ERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKMVSFVGRALQKPGLES 193 (403)
Q Consensus 134 e~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vlq~P~f~~ 193 (403)
..|++....+..+|.-|.=+...+..++..+..++..++..++.++.-|+.+=++--++-
T Consensus 152 ~~Lkk~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE 211 (242)
T 3uux_B 152 SALKSFSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLE 211 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 456666666666666666666666667777777777777777777777777666544443
No 110
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=32.99 E-value=1.5e+02 Score=22.00 Aligned_cols=43 Identities=23% Similarity=0.298 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 015655 145 LELQRHEQERQGFESQMQLLRERFQLMEQRQQKMVSFVGRALQKPGL 191 (403)
Q Consensus 145 ~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vlq~P~f 191 (403)
..+.+|+|.+-.+-.+++.|+..-..+|+.+..+ .+++++.|.
T Consensus 11 ~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL----~~LLkqHgl 53 (58)
T 3a2a_A 11 RQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERL----NKLLRQHGL 53 (58)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHcCC
Confidence 4677888888888888888888877777655444 444444444
No 111
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=32.22 E-value=94 Score=24.90 Aligned_cols=53 Identities=23% Similarity=0.417 Sum_probs=31.5
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 127 QGLKDDIERLKKEKEILLLELQRHEQERQ-----GFESQMQLLRERFQLMEQRQQKMV 179 (403)
Q Consensus 127 ~~l~~eIe~LK~d~~~L~~EL~rlrqqqq-----~l~~qvq~L~erl~~~Eq~Qqqml 179 (403)
..+.+.+-.|...+..|..++..++++.. ..+.++..|+..+..+...-..+.
T Consensus 19 AsyIdKVR~LEqqN~~Le~~i~~l~~~~~~~~~~~ye~~i~~Lr~~i~~~~~ek~~l~ 76 (93)
T 3s4r_A 19 ANLIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVE 76 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777777778888777766655322 134556666666655544433333
No 112
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=32.12 E-value=1.4e+02 Score=21.48 Aligned_cols=31 Identities=26% Similarity=0.189 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 130 KDDIERLKKEKEILLLELQRHEQERQGFESQ 160 (403)
Q Consensus 130 ~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~q 160 (403)
+.+|.+||.-+..|...++.|+......+++
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQE 33 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEKEQE 33 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 3456666666666655555554444433333
No 113
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=31.83 E-value=2e+02 Score=23.08 Aligned_cols=28 Identities=18% Similarity=0.430 Sum_probs=14.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQ 155 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq 155 (403)
.+..+|..|.++...|..+|..++.+..
T Consensus 22 ~L~~eL~~lEke~~~l~~el~~le~E~~ 49 (96)
T 3q8t_A 22 RLIQELEDVEKNRKVVAENLEKVQAEAE 49 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3555666666555555555554444433
No 114
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=31.75 E-value=1e+02 Score=20.09 Aligned_cols=22 Identities=23% Similarity=0.445 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 015655 153 ERQGFESQMQLLRERFQLMEQR 174 (403)
Q Consensus 153 qqq~l~~qvq~L~erl~~~Eq~ 174 (403)
+...+..=+|.|.+|+..+|..
T Consensus 7 ~~r~l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 7 DVRNLNAIVQKLQERLDRLEET 28 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444455666666666554
No 115
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=30.93 E-value=1.4e+02 Score=23.79 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 015655 130 KDDIERLKKEKEILLLELQRHEQ 152 (403)
Q Consensus 130 ~~eIe~LK~d~~~L~~EL~rlrq 152 (403)
..++..|..++..|..+|..|+.
T Consensus 42 ~~r~~~Le~EN~~Lr~~v~~L~~ 64 (87)
T 1hjb_A 42 QHKVLELTAENERLQKKVEQLSR 64 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444333
No 116
>2fcw_A Alpha-2-macroglobulin receptor-associated protein; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: a.13.1.1 PDB: 2ftu_A
Probab=30.75 E-value=2.4e+02 Score=23.60 Aligned_cols=13 Identities=15% Similarity=0.240 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHH
Q 015655 130 KDDIERLKKEKEI 142 (403)
Q Consensus 130 ~~eIe~LK~d~~~ 142 (403)
+..|..+++-...
T Consensus 37 E~rl~K~rH~~~e 49 (109)
T 2fcw_A 37 EAKIEKHNHYQKQ 49 (109)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344444443333
No 117
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=30.74 E-value=1.5e+02 Score=29.83 Aligned_cols=44 Identities=14% Similarity=0.188 Sum_probs=29.5
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 127 QGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQL 170 (403)
Q Consensus 127 ~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~ 170 (403)
..|+..|.-||+....-...|..|+....++..+||.|+..+..
T Consensus 116 ~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~Id~ 159 (390)
T 1deq_A 116 EDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDIDI 159 (390)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677777777776555557777777777777777777765543
No 118
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=30.52 E-value=1.1e+02 Score=25.57 Aligned_cols=14 Identities=21% Similarity=0.112 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHHH
Q 015655 138 KEKEILLLELQRHE 151 (403)
Q Consensus 138 ~d~~~L~~EL~rlr 151 (403)
.+...|..+++.|+
T Consensus 18 ~e~~~l~~~~~el~ 31 (125)
T 1joc_A 18 GEIEKLQTKVLELQ 31 (125)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHH
Confidence 33333333333333
No 119
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=30.41 E-value=1.2e+02 Score=21.78 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=21.5
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 125 ERQGLKDDIERLKKEKEILLLELQRHEQERQGFES 159 (403)
Q Consensus 125 e~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~ 159 (403)
|...++.-+.+|..|+..|..++..|+....+++.
T Consensus 18 enaklenivarlendnanlekdianlekdianler 52 (56)
T 3he4_A 18 ENAKLENIVARLENDNANLEKDIANLEKDIANLER 52 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 33445666667777777777766666655555443
No 120
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=30.30 E-value=1.6e+02 Score=21.44 Aligned_cols=40 Identities=8% Similarity=0.056 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERF 168 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl 168 (403)
|..+|..|......|..++..++.+.+....+-....+||
T Consensus 9 Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~Rl 48 (52)
T 1jcd_A 9 ASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRA 48 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444444444444444444444444333333333333343
No 121
>3cue_D Transport protein particle 22 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=30.17 E-value=30 Score=31.51 Aligned_cols=61 Identities=16% Similarity=0.263 Sum_probs=46.6
Q ss_pred cHH-HHHHHhccCCCCCCceEEcCCCCeEEE-ECCcchhhcc-ccccc-CcCCchhhhh-----ccccccc
Q 015655 13 PFL-AKTYEMVDDSSTDLTVSWSSSNKSFIV-WNPPDFARDL-LPKYF-KHNNFSSFIR-----QLNTYGF 74 (403)
Q Consensus 13 ~Fl-~KLy~mved~~~~~iI~Ws~~G~sFiI-~d~~~F~~~V-LPkyF-kh~nfsSFvR-----QLN~YGF 74 (403)
.|+ ..+|.++=.-. .+...|+++++.|+| .|..-|..-| ||+.. ..-+|+.|+. -|.+-||
T Consensus 88 ~fI~k~~Wk~lfgk~-~d~L~~t~~~~~y~L~~d~nPl~~fv~lP~~~~~~l~y~~f~cGIIrGaL~~~g~ 157 (193)
T 3cue_D 88 EVLSKCAFKIFLNIT-PNITNWSHNKDTFSLILDENPLADFVELPMDAMKSLWYSNILCGVLKGSLEMVQL 157 (193)
T ss_dssp HHHHHHHHHHHSSCC-CCCBCCCTTSCCCBCCBSCCGGGSSCCCCTTTTTSCCTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCC-CccceecCCCCEEEEEECCchhhhheeCcHhHHhCcchhhhHHHHHHHHHHhCCC
Confidence 477 45888887754 455889999999999 7777666554 78776 6678999984 4888999
No 122
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=30.16 E-value=2.1e+02 Score=24.30 Aligned_cols=23 Identities=22% Similarity=0.226 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 015655 143 LLLELQRHEQERQGFESQMQLLR 165 (403)
Q Consensus 143 L~~EL~rlrqqqq~l~~qvq~L~ 165 (403)
|..||..|.++.++...++..|+
T Consensus 76 LqgEI~~Lnq~Lq~a~ae~erlr 98 (121)
T 3mq7_A 76 LEGEITTLNHKLQDASAEVERLR 98 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444333
No 123
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=30.05 E-value=1.8e+02 Score=23.90 Aligned_cols=43 Identities=21% Similarity=0.283 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLM 171 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~ 171 (403)
+.+-++-|++....|...+..++.+...+..++..+.+.++.+
T Consensus 86 ~~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~ 128 (133)
T 1fxk_C 86 FEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEEL 128 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666777777777777766666666666666666655533
No 124
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=29.83 E-value=77 Score=25.62 Aligned_cols=7 Identities=57% Similarity=0.752 Sum_probs=2.7
Q ss_pred ccccccc
Q 015655 96 RLKNIHR 102 (403)
Q Consensus 96 lL~~IkR 102 (403)
.|+.++|
T Consensus 25 ~lKq~RR 31 (90)
T 2wt7_B 25 RLKQKRR 31 (90)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3444433
No 125
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=29.46 E-value=68 Score=26.46 Aligned_cols=30 Identities=30% Similarity=0.361 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 132 DIERLKKEKEILLLELQRHEQERQGFESQM 161 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq~l~~qv 161 (403)
++..|+++...|..|-.+|+++...++.++
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444445555555554444444443
No 126
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=29.33 E-value=2.1e+02 Score=22.67 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=34.5
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 127 QGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQ 173 (403)
Q Consensus 127 ~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq 173 (403)
.++..||..|+-....|..|=...+.....+..++..|+++|..-+.
T Consensus 22 E~L~qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe~kd~ 68 (81)
T 3qh9_A 22 EELLQELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVALKDA 68 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhHH
Confidence 35777888888777777777777777777777778877777765444
No 127
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=28.99 E-value=42 Score=26.38 Aligned_cols=23 Identities=9% Similarity=0.203 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 015655 145 LELQRHEQERQGFESQMQLLRER 167 (403)
Q Consensus 145 ~EL~rlrqqqq~l~~qvq~L~er 167 (403)
.++..|++++..|..+|..|+..
T Consensus 43 ~r~~~L~~eN~~L~~~v~~L~~E 65 (78)
T 1gu4_A 43 HKVLELTAENERLQKKVEQLSRE 65 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444433
No 128
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=28.90 E-value=35 Score=25.92 Aligned_cols=29 Identities=21% Similarity=0.313 Sum_probs=12.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGF 157 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l 157 (403)
|..++.+.++++..|..+|.-...+|..|
T Consensus 17 L~~~v~~~e~~Q~~ldq~Ld~Ie~QQ~EL 45 (64)
T 3t97_C 17 LHREVEKVKLDQKRLDQELDFILSQQKEL 45 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444433
No 129
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=27.81 E-value=2e+02 Score=26.46 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 132 DIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQ 169 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~ 169 (403)
+++.|+.....|..++..++.++..+..++.+++.|..
T Consensus 60 e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~ 97 (213)
T 4ani_A 60 ELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTR 97 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555666666666665556666666666654
No 130
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=27.58 E-value=2.7e+02 Score=23.22 Aligned_cols=27 Identities=19% Similarity=0.152 Sum_probs=20.7
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 127 QGLKDDIERLKKEKEILLLELQRHEQE 153 (403)
Q Consensus 127 ~~l~~eIe~LK~d~~~L~~EL~rlrqq 153 (403)
+.|..+|+.|+..+..|...|..+++.
T Consensus 48 q~L~~el~~l~~~~~sLE~~l~e~e~~ 74 (131)
T 3tnu_A 48 QNLEIELQSQLSMKASLENSLEETKGR 74 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 567888888888888888877666554
No 131
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=27.29 E-value=83 Score=23.48 Aligned_cols=26 Identities=27% Similarity=0.280 Sum_probs=15.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQE 153 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqq 153 (403)
.|+.+++.|+.++..|..|+..|+++
T Consensus 34 ~Le~~v~~L~~eN~~L~~ev~~Lr~~ 59 (63)
T 2dgc_A 34 QLEDKVEELLSKNYHLENEVARLKKL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556666666666666666655543
No 132
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=27.16 E-value=2.7e+02 Score=23.12 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 139 EKEILLLELQRHEQERQGFESQMQLLRERFQLME 172 (403)
Q Consensus 139 d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~E 172 (403)
|+.+|.....+.+++...+..+++.|+.+|...+
T Consensus 5 e~~~~~~~~~~~e~e~~~l~~~~~el~~~l~~~~ 38 (125)
T 1joc_A 5 ERRALLERCLKGEGEIEKLQTKVLELQRKLDNTT 38 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 3344444444445555555555555555554433
No 133
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=26.80 E-value=1.5e+02 Score=20.08 Aligned_cols=31 Identities=19% Similarity=0.134 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 141 EILLLELQRHEQERQGFESQMQLLRERFQLM 171 (403)
Q Consensus 141 ~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~ 171 (403)
+.|...+..|...+..++.++..|++-+..+
T Consensus 4 nQLE~kVEeLl~~~~~Le~EV~RL~~ll~~~ 34 (36)
T 1kd8_A 4 KQLEAEVEEIESEVWHLENEVARLEKENAEC 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhccc
Confidence 3566677777777888888888887766544
No 134
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=26.68 E-value=1.5e+02 Score=21.02 Aligned_cols=24 Identities=38% Similarity=0.501 Sum_probs=15.6
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHH
Q 015655 131 DDIERLKKEK-EILLLELQRHEQER 154 (403)
Q Consensus 131 ~eIe~LK~d~-~~L~~EL~rlrqqq 154 (403)
.+++++|.+. ..+..||++++++.
T Consensus 7 ~dle~~KqEIL~E~RkElqK~K~EI 31 (45)
T 1use_A 7 SDLQRVKQELLEEVKKELQKVKEEI 31 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777763 56667777776653
No 135
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=26.64 E-value=1.1e+02 Score=25.21 Aligned_cols=38 Identities=21% Similarity=0.210 Sum_probs=25.0
Q ss_pred CCCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 118 GTPLTESERQGLKDDIERLKKEKEILLLELQRHEQERQ 155 (403)
Q Consensus 118 ~~~l~~~e~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq 155 (403)
+.|++..+...+..+|+.|+.++..|..++..|+-+..
T Consensus 6 ~~~~~~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le 43 (100)
T 1go4_E 6 SFLFSREEADTLRLKVEELEGERSRLEEEKRMLEAQLE 43 (100)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555556667777888888888888877777665543
No 136
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=26.60 E-value=1.3e+02 Score=23.96 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 132 DIERLKKEKEILLLELQRHEQERQGFESQMQLLRE 166 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~e 166 (403)
.+..++.....+..+|..++..+..+..++..++.
T Consensus 4 ~~~~~~~~~~~~~~~l~~L~~~~~~l~~~i~~l~~ 38 (112)
T 1l8d_A 4 LLEELETKKTTIEEERNEITQRIGELKNKIGDLKT 38 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555666555555555444444443
No 137
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=26.52 E-value=1.8e+02 Score=20.92 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 145 LELQRHEQERQGFESQMQLLRERFQLMEQRQQKMVSFVG 183 (403)
Q Consensus 145 ~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~ 183 (403)
..|.+|++-+..+-.+++.|+..-..+++....+-.+|.
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LLk 42 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLLK 42 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 467788888888888899998888888876655544443
No 138
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=26.41 E-value=2.5e+02 Score=22.44 Aligned_cols=60 Identities=18% Similarity=0.215 Sum_probs=39.4
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015655 127 QGLKDDIERLKKEKEILLLELQRHEQER------QGFESQMQLLRERFQLMEQRQQKMVSFVGRALQ 187 (403)
Q Consensus 127 ~~l~~eIe~LK~d~~~L~~EL~rlrqqq------q~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vlq 187 (403)
..+..+|..|+.....|..++..++.+. ......+. +-..|..+..--|.++..|+..-.
T Consensus 4 ~~L~~~i~~L~~q~~~L~~ei~~~~a~L~~~~~~~~~~~hI~-~Lh~YNeiKD~gq~L~g~iA~~rg 69 (85)
T 3viq_B 4 SQLESRVHLLEQQKEQLESSLQDALAKLKNRDAKQTVQKHID-LLHTYNEIRDIALGMIGKVAEHEK 69 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHcC
Confidence 4577888888888888888888776532 22333333 334566666777888888877543
No 139
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=26.40 E-value=2.3e+02 Score=21.96 Aligned_cols=44 Identities=25% Similarity=0.228 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLME 172 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~E 172 (403)
-.+||++|+.-...|.+.|.+.-.-+..++.+.+.++..+..++
T Consensus 15 Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~~q~s~~~l~ 58 (74)
T 2q6q_A 15 KQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLE 58 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Confidence 35788888888888888888777666666666666555544443
No 140
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=25.98 E-value=2.8e+02 Score=22.97 Aligned_cols=30 Identities=10% Similarity=0.226 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 144 LLELQRHEQERQGFESQMQLLRERFQLMEQ 173 (403)
Q Consensus 144 ~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq 173 (403)
.+||...+++...+..++..|+..+..+++
T Consensus 10 ~~eL~~~~~ei~~L~~ei~eLk~~ve~lEk 39 (106)
T 4e61_A 10 QAELTKSQETIGSLNEEIEQYKGTVSTLEI 39 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333444444444444444444443
No 141
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=25.93 E-value=2.7e+02 Score=22.74 Aligned_cols=48 Identities=19% Similarity=0.124 Sum_probs=27.5
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 126 RQGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQ 173 (403)
Q Consensus 126 ~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq 173 (403)
...+..+|.+|+.+......|+.+|......-...-...+.....+++
T Consensus 7 ~e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ 54 (97)
T 2eqb_B 7 YNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNK 54 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566777777777777777776665554444444444444444443
No 142
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=25.86 E-value=40 Score=34.02 Aligned_cols=63 Identities=17% Similarity=0.340 Sum_probs=40.8
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015655 124 SERQGLKDDIERLKKEKEILLLELQRHEQ---ERQGFESQMQLLRERFQLMEQRQQKMVSFVGRAL 186 (403)
Q Consensus 124 ~e~~~l~~eIe~LK~d~~~L~~EL~rlrq---qqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vl 186 (403)
.++..+..+++.|+.+++.+..++..++. +...+..++..+++++..++.....+-.-|..++
T Consensus 37 ~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (425)
T 2dq3_A 37 KRRREIIKRLEALRSERNKLSKEIGKLKREGKDTTEIQNRVKELKEEIDRLEEELRKVEEELKNTL 102 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTGGGSSCSCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888898888888888765422 1234455666666666666666655555554433
No 143
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=25.84 E-value=1.9e+02 Score=20.90 Aligned_cols=41 Identities=20% Similarity=0.201 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 130 KDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQL 170 (403)
Q Consensus 130 ~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~ 170 (403)
...+..|+.....|.+.-.+|..-.+....++..|++.|..
T Consensus 8 ~~r~~~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~ 48 (51)
T 3m91_A 8 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDR 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566677777777777777777777777777777766654
No 144
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=25.82 E-value=2.2e+02 Score=28.69 Aligned_cols=44 Identities=14% Similarity=0.185 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015655 143 LLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKMVSFVGRAL 186 (403)
Q Consensus 143 L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~vl 186 (403)
|..|+.+++......+.+++.|+.+|..++.+.+++-..|..+.
T Consensus 89 ml~~~~~~e~~~~~~~~~i~~l~~~~~~~~~~i~~l~~~i~~l~ 132 (409)
T 1m1j_C 89 IIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQLE 132 (409)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33344444444444445555555555555555454444444443
No 145
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=25.62 E-value=1.1e+02 Score=26.07 Aligned_cols=45 Identities=11% Similarity=0.156 Sum_probs=29.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLME 172 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~E 172 (403)
.+.+-++-|++....|...+.++..+...+..++..++..++.+.
T Consensus 95 ~~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l~ 139 (151)
T 2zdi_C 95 SIDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEVQ 139 (151)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667777777777777777777666666666666665555443
No 146
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=25.48 E-value=2.9e+02 Score=22.90 Aligned_cols=27 Identities=30% Similarity=0.368 Sum_probs=20.1
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 127 QGLKDDIERLKKEKEILLLELQRHEQE 153 (403)
Q Consensus 127 ~~l~~eIe~LK~d~~~L~~EL~rlrqq 153 (403)
+.+..+|+.|+..+..|...|...++.
T Consensus 46 q~L~~el~~l~~~~~~LE~~l~e~e~~ 72 (129)
T 3tnu_B 46 QRLRAEIDNVKKQCANLQNAIADAEQR 72 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 457788888888888888777666554
No 147
>1sz7_A BET3 homolog, trafficking protein particle complex subunit 3; alpha-beta plait, trapp complex, palmitoylated, transport PR; HET: PLM; 1.55A {Homo sapiens} PDB: 2cfh_A* 2pwn_A* 3kxc_A* 1wc8_A* 2j3w_D* 2j3r_A* 2j3t_A* 1wc9_A* 2c0j_A*
Probab=25.42 E-value=49 Score=30.34 Aligned_cols=62 Identities=15% Similarity=0.248 Sum_probs=45.5
Q ss_pred cHH-HHHHHhccCCCCCCceEEcCCCCeEEE-ECCcchhhcc-cccccCcCCchhhhh-----ccccccce
Q 015655 13 PFL-AKTYEMVDDSSTDLTVSWSSSNKSFIV-WNPPDFARDL-LPKYFKHNNFSSFIR-----QLNTYGFR 75 (403)
Q Consensus 13 ~Fl-~KLy~mved~~~~~iI~Ws~~G~sFiI-~d~~~F~~~V-LPkyFkh~nfsSFvR-----QLN~YGF~ 75 (403)
.|| ..+|.++=.- ..+...|+++++.|+| .|..-+..-| ||+-.+.-+|+.|+. -|.+-||.
T Consensus 85 ~fI~k~~Wk~lFgk-~ad~L~~t~~~~~Y~L~~D~nPL~~fvslP~~~~~l~y~~f~cGIIrGaL~~lg~~ 154 (200)
T 1sz7_A 85 DVIAKVAFKMYLGI-TPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEMVQMA 154 (200)
T ss_dssp HHHHHTHHHHHHSC-CCEEECCCTTSCEEEEEESSCTTCTTCCCCGGGTTCCTTTHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHhCC-CCccceecCCCCEEEEEECCcHHHHhccCCccccCCchhhhHHHHHHHHHHhCCCE
Confidence 456 3477777553 3466889999999999 7776555543 687667778999984 48899998
No 148
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=25.36 E-value=1.9e+02 Score=22.16 Aligned_cols=43 Identities=19% Similarity=0.200 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLM 171 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~ 171 (403)
+...+..|+.++..+...+..++++..-.-..+..++...+..
T Consensus 7 iKkkmqaLk~Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q~~ 49 (75)
T 3mtu_A 7 IKKKMQMLKLDKENALDRAEQAEADKDFYFGKLRNIELICQEN 49 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4455566666666666666666664333333444444444433
No 149
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=25.16 E-value=83 Score=29.95 Aligned_cols=34 Identities=24% Similarity=0.077 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchhhccc
Q 015655 164 LRERFQLMEQRQQKMVSFVGRALQKPGLESNFGA 197 (403)
Q Consensus 164 L~erl~~~Eq~Qqqml~fL~~vlq~P~f~~~l~q 197 (403)
|.+.+....++..++-.-|.++.+=|-++-.++.
T Consensus 73 L~~~Lk~ar~El~~LkeElerL~sPPL~iGtvle 106 (251)
T 3m9b_A 73 LMETLKEARQQLLALREEVDRLGQPPSGYGVLLA 106 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEE
Confidence 3333333333334444555555565655444444
No 150
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=25.11 E-value=2.2e+02 Score=21.42 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLR 165 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~ 165 (403)
-+.+|..|-+-+..|..||..++...+.+..+-..|+
T Consensus 25 SeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr 61 (63)
T 2w6a_A 25 SEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLR 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhc
Confidence 3678888888888888888888888777776666554
No 151
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=24.89 E-value=2e+02 Score=23.77 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=21.9
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 124 SERQGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLR 165 (403)
Q Consensus 124 ~e~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~ 165 (403)
.|+..+.-+|+-||-....+...+..++.+...-..++..++
T Consensus 23 NEKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~K 64 (103)
T 4h22_A 23 NEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREK 64 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555666665555555555555555554444444333
No 152
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=24.65 E-value=3e+02 Score=22.72 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=31.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 128 GLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKMV 179 (403)
Q Consensus 128 ~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml 179 (403)
+|..+--.|.+..+.|..|-.+|++.......++..|...+..+....+.+.
T Consensus 34 ELIqEYl~LE~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~~ENq~L~ 85 (104)
T 3s9g_A 34 ELIKEYLELEKSLSRMEDENNRLRLESKRLDARVRELELELDRLRAENLQLL 85 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHH
Confidence 3444445555666666666666666666666777777777766655444443
No 153
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=24.44 E-value=70 Score=19.96 Aligned_cols=21 Identities=38% Similarity=0.468 Sum_probs=12.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQR 149 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~r 149 (403)
+.+|+..||-+..+|..|+..
T Consensus 5 lkdevgelkgevralkdevkd 25 (27)
T 3v86_A 5 LKDEVGELKGEVRALKDEVKD 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhHHHHHHHHHhc
Confidence 455666666666665555543
No 154
>1aq5_A Matrilin-1, CMP, cartilage matrix protein; coiled-coil, heptad repeat, interchain disulfide bonds, oligomerization domain, trimer; NMR {Gallus gallus} SCOP: h.1.6.1
Probab=24.19 E-value=1.4e+02 Score=21.37 Aligned_cols=26 Identities=8% Similarity=0.183 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 143 LLLELQRHEQERQGFESQMQLLRERF 168 (403)
Q Consensus 143 L~~EL~rlrqqqq~l~~qvq~L~erl 168 (403)
....|+.|.++...+..++.+|+.||
T Consensus 21 v~~~l~~Lt~kL~~vt~rle~lEnrl 46 (47)
T 1aq5_A 21 VEELINTLQQKLEAVAKRIEALENKI 46 (47)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34555555555555555555555443
No 155
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=24.13 E-value=58 Score=23.71 Aligned_cols=25 Identities=12% Similarity=0.181 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 141 EILLLELQRHEQERQGFESQMQLLR 165 (403)
Q Consensus 141 ~~L~~EL~rlrqqqq~l~~qvq~L~ 165 (403)
..|..++..|+.++..|..++..|.
T Consensus 25 ~~LE~~v~~L~~eN~~L~~~~~~L~ 49 (55)
T 1dh3_A 25 KSLENRVAVLENQNKTLIEELKALK 49 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444443
No 156
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=24.02 E-value=1.9e+02 Score=30.40 Aligned_cols=11 Identities=9% Similarity=0.446 Sum_probs=4.7
Q ss_pred HHHHHHHHHHH
Q 015655 174 RQQKMVSFVGR 184 (403)
Q Consensus 174 ~Qqqml~fL~~ 184 (403)
.|+||.+..+.
T Consensus 181 ~QKQLeQv~a~ 191 (562)
T 3ghg_A 181 QQKQLEQVIAK 191 (562)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhhc
Confidence 44444443333
No 157
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=23.95 E-value=1.9e+02 Score=20.26 Aligned_cols=8 Identities=25% Similarity=0.023 Sum_probs=2.8
Q ss_pred HHHHHHHH
Q 015655 141 EILLLELQ 148 (403)
Q Consensus 141 ~~L~~EL~ 148 (403)
..|...+.
T Consensus 20 aeLEervs 27 (42)
T 2oqq_A 20 SELEERLS 27 (42)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 158
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=23.81 E-value=1.2e+02 Score=24.82 Aligned_cols=24 Identities=17% Similarity=0.130 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 132 DIERLKKEKEILLLELQRHEQERQ 155 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq 155 (403)
++..||.+...|..+=+.|-+...
T Consensus 7 ~~~~Lk~El~~L~~~E~~LD~~i~ 30 (106)
T 2aze_B 7 RLEGLTQDLRQLQESEQQLDHLMN 30 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555544444444444333333
No 159
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=23.69 E-value=2.1e+02 Score=20.73 Aligned_cols=44 Identities=9% Similarity=0.117 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 131 DDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQR 174 (403)
Q Consensus 131 ~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~ 174 (403)
.+|+.|-.+...|...+..|..+...+...++..++.-.+.-+|
T Consensus 4 aki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~R 47 (52)
T 1jcd_A 4 AKADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQR 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45677777777777777777777666666666665554444444
No 160
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=23.09 E-value=1.1e+02 Score=25.90 Aligned_cols=14 Identities=36% Similarity=0.446 Sum_probs=2.6
Q ss_pred hHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEI 142 (403)
Q Consensus 129 l~~eIe~LK~d~~~ 142 (403)
|..+|+.||+++..
T Consensus 4 l~~~~~~l~~~~~~ 17 (182)
T 3kqg_A 4 LNAQIPELKSDLEK 17 (182)
T ss_dssp ---------CHHHH
T ss_pred hhhhHHHHHHHHHH
Confidence 44566666665543
No 161
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=22.76 E-value=2.9e+02 Score=21.92 Aligned_cols=47 Identities=17% Similarity=0.206 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 138 KEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKMVSFVGR 184 (403)
Q Consensus 138 ~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqml~fL~~ 184 (403)
+-+..+..||.+.+..+..++.+++..+.+.+.++...+++-.-|..
T Consensus 24 qAKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~ee 70 (81)
T 1wt6_A 24 LTRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMEL 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667888888888888888888777777766665544444444433
No 162
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=22.62 E-value=53 Score=32.23 Aligned_cols=11 Identities=18% Similarity=0.498 Sum_probs=7.9
Q ss_pred HHHHHHHHhhh
Q 015655 256 FWENIVQDVGQ 266 (403)
Q Consensus 256 ~~E~~~~~~~~ 266 (403)
-|+++-.+.|.
T Consensus 120 ~W~~Yk~GFG~ 130 (319)
T 1fzc_C 120 NWIQYKEGFGH 130 (319)
T ss_dssp CHHHHHHCEEE
T ss_pred CHHHHhHhhCC
Confidence 38888887763
No 163
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=22.60 E-value=3.5e+02 Score=24.15 Aligned_cols=54 Identities=13% Similarity=0.168 Sum_probs=0.0
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 125 ERQGLKDDIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQLMEQRQQKM 178 (403)
Q Consensus 125 e~~~l~~eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~~~Eq~Qqqm 178 (403)
.+......|..|......|..||.+++........+...|.+++..+|..-..|
T Consensus 84 ~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a~~ 137 (168)
T 3o0z_A 84 DRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNL 137 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 164
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=22.25 E-value=2.4e+02 Score=20.71 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 140 KEILLLELQRHEQERQGFESQMQLLRERFQ 169 (403)
Q Consensus 140 ~~~L~~EL~rlrqqqq~l~~qvq~L~erl~ 169 (403)
...|..++..|..++..|..++..|++.+.
T Consensus 25 ~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~ 54 (63)
T 2wt7_A 25 TDTLQAETDQLEDEKSALQTEIANLLKEKE 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666666666666666666655544
No 165
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=22.14 E-value=44 Score=21.02 Aligned_cols=16 Identities=19% Similarity=0.216 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 015655 136 LKKEKEILLLELQRHE 151 (403)
Q Consensus 136 LK~d~~~L~~EL~rlr 151 (403)
|.-++.+|.+.+..|+
T Consensus 5 lefendaleqkiaalk 20 (28)
T 3ra3_A 5 LEFENDALEQKIAALK 20 (28)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHH
Confidence 3333444444333333
No 166
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=21.62 E-value=94 Score=29.57 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 132 DIERLKKEKEILLLELQRHEQERQGFESQMQLLRERFQ 169 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl~ 169 (403)
.+..|+++...|.....+|....+.++.++..|++.+.
T Consensus 55 ~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeEle 92 (251)
T 3m9b_A 55 DIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVD 92 (251)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444445544444445455555555555555554
No 167
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=21.30 E-value=95 Score=22.51 Aligned_cols=23 Identities=22% Similarity=0.423 Sum_probs=10.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 015655 129 LKDDIERLKKEKEILLLELQRHE 151 (403)
Q Consensus 129 l~~eIe~LK~d~~~L~~EL~rlr 151 (403)
|+.++..|..++..|..++..|+
T Consensus 27 LE~~v~~L~~eN~~L~~~~~~L~ 49 (55)
T 1dh3_A 27 LENRVAVLENQNKTLIEELKALK 49 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444443
No 168
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=21.19 E-value=3.5e+02 Score=22.33 Aligned_cols=35 Identities=17% Similarity=0.299 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 134 ERLKKEKEILLLELQRHEQERQGFESQMQLLRERF 168 (403)
Q Consensus 134 e~LK~d~~~L~~EL~rlrqqqq~l~~qvq~L~erl 168 (403)
..|-.++.+|.=++..|+.....++..+..++..+
T Consensus 19 AQLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~ 53 (103)
T 4h22_A 19 AQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQY 53 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445666666666666666666666666555443
No 169
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=20.31 E-value=2.9e+02 Score=22.03 Aligned_cols=24 Identities=33% Similarity=0.353 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 015655 132 DIERLKKEKEILLLELQRHEQERQ 155 (403)
Q Consensus 132 eIe~LK~d~~~L~~EL~rlrqqqq 155 (403)
|.+.|.+....+..|+.+|++++.
T Consensus 39 EN~~Lh~~ie~~~eEi~~Lk~en~ 62 (83)
T 1wlq_A 39 ENEKLHKEIEQKDSEIARLRKENK 62 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555555555543
Done!