Your job contains 1 sequence.
>015656
MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW
RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG
LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK
QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV
KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL
GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS
GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015656
(403 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 938 6.9e-145 2
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 441 1.4e-41 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 302 6.2e-37 3
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 313 1.6e-33 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 313 1.6e-33 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 313 3.0e-33 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 313 3.0e-33 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 313 3.1e-33 2
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 315 5.0e-33 2
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 315 5.0e-33 2
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 357 5.3e-33 2
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 309 6.1e-33 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 312 6.3e-33 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 309 6.3e-33 2
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 259 7.0e-33 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 307 1.3e-32 2
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 351 2.3e-32 2
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 343 1.6e-31 2
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 342 1.6e-31 2
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 343 1.6e-31 2
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 342 2.1e-31 2
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 342 2.1e-31 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 359 8.8e-31 1
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 336 1.8e-30 1
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 348 1.3e-29 1
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 348 1.3e-29 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 347 1.4e-29 1
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 347 1.6e-29 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 299 2.8e-29 2
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 340 9.2e-29 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 330 1.4e-28 1
UNIPROTKB|F1S9B1 - symbol:SERGEF "Uncharacterized protein... 240 1.6e-28 2
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 329 1.8e-28 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 327 2.3e-28 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 327 2.8e-28 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 326 3.8e-28 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 324 4.2e-28 2
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 244 5.1e-28 2
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 323 8.0e-28 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 323 8.0e-28 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 323 1.0e-27 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 318 2.7e-27 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 239 4.5e-27 2
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 315 5.7e-27 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 247 6.8e-27 2
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 314 1.2e-26 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 303 2.4e-26 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 308 3.1e-26 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 301 4.0e-26 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 304 8.2e-26 1
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 239 8.6e-26 2
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 303 1.1e-25 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 296 1.2e-25 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 301 1.8e-25 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 300 2.2e-25 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 287 3.3e-25 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 298 3.6e-25 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 295 4.8e-25 1
UNIPROTKB|Q7ZZC8 - symbol:nek9 "Serine/threonine-protein ... 247 7.9e-25 2
UNIPROTKB|E2QYP0 - symbol:NEK9 "Uncharacterized protein" ... 244 1.6e-24 2
UNIPROTKB|Q8TD19 - symbol:NEK9 "Serine/threonine-protein ... 243 2.1e-24 2
MGI|MGI:1913989 - symbol:Rcc1 "regulator of chromosome co... 246 2.1e-24 2
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 292 2.4e-24 1
UNIPROTKB|F1S2Q4 - symbol:NEK9 "Uncharacterized protein" ... 241 4.0e-24 2
TAIR|locus:2156233 - symbol:RUG2 "RCC1/UVR8/GEF-like 2" s... 288 5.1e-24 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 293 6.2e-24 1
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 243 8.7e-24 2
UNIPROTKB|F1MM88 - symbol:NEK9 "Uncharacterized protein" ... 241 1.0e-23 2
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 284 1.2e-23 2
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 219 1.3e-23 2
RGD|1307187 - symbol:Nek9 "NIMA-related kinase 9" species... 236 1.5e-23 2
MGI|MGI:2387995 - symbol:Nek9 "NIMA (never in mitosis gen... 236 1.5e-23 2
ZFIN|ZDB-GENE-061220-11 - symbol:sergef "secretion regula... 220 1.6e-23 2
UNIPROTKB|F1NAG9 - symbol:NEK9 "Uncharacterized protein" ... 230 1.9e-23 2
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 290 2.1e-23 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 286 2.8e-23 1
UNIPROTKB|P18754 - symbol:RCC1 "Regulator of chromosome c... 238 3.2e-23 2
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 285 3.2e-23 1
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 241 3.4e-23 2
UNIPROTKB|A7Z018 - symbol:RCC1 "Uncharacterized protein" ... 240 7.4e-23 2
UNIPROTKB|P23800 - symbol:RCC1 "Regulator of chromosome c... 235 7.8e-23 2
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 282 8.6e-23 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 287 1.8e-22 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 279 4.9e-22 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 280 6.7e-22 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 278 1.3e-21 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 277 1.6e-21 1
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 204 7.9e-21 2
UNIPROTKB|F1Q1C6 - symbol:WBSCR16 "Uncharacterized protei... 198 9.9e-21 2
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 192 1.0e-20 2
WB|WBGene00017195 - symbol:glo-4 species:6239 "Caenorhabd... 272 1.2e-20 1
UNIPROTKB|Q96I51 - symbol:WBSCR16 "Williams-Beuren syndro... 197 2.1e-20 2
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 261 2.6e-20 1
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 257 3.3e-20 1
UNIPROTKB|F1RJL0 - symbol:WBSCR16 "Uncharacterized protei... 196 4.7e-20 2
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 250 5.3e-20 2
UNIPROTKB|E1BIS5 - symbol:WBSCR16 "Uncharacterized protei... 197 5.4e-20 2
DICTYBASE|DDB_G0282633 - symbol:DDB_G0282633 "putative gu... 225 6.4e-20 2
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 263 8.7e-20 1
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 234 9.5e-20 2
WARNING: Descriptions of 124 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 938 (335.3 bits), Expect = 6.9e-145, Sum P(2) = 6.9e-145
Identities = 175/273 (64%), Positives = 219/273 (80%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L +D KLG +G+C RW+SS +RFAA+WG+GDYGRLGLG+L+S+W P VCSA HS
Sbjct: 25 LLKDSKLGP-IGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHS 83
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ A+ACGGAHTLFLTET V+ATGLND GQLG+S+ ++++PL +SGL K+++ IS GY
Sbjct: 84 ITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGY 143
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + ALG E SVAV
Sbjct: 144 YHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAV 203
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV AAG LHSAC
Sbjct: 204 TDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSAC 263
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
DENG ++FG+++++KM F +A PS+IS
Sbjct: 264 TDENGSAFMFGEKSINKMGFGGVRNATTPSIIS 296
Score = 499 (180.7 bits), Expect = 6.9e-145, Sum P(2) = 6.9e-145
Identities = 86/117 (73%), Positives = 98/117 (83%)
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
GGELYTWGSNENGCLG S V HSP RV+GPF ES V QVSCGWKHTAAIS+ + TWG
Sbjct: 317 GGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWG 376
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
WGGSHGTFS DGHSSGGQLGHG+DVDY P +V+ G+NV+A+ +SCGFNHT A+LE+
Sbjct: 377 WGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 60/227 (26%), Positives = 95/227 (41%)
Query: 43 WGNGDYGRLGLG---SL------ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG G GRLG G SL S + P + E + +A G H+ E G +
Sbjct: 212 WGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAF 271
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G ++G + + P IS + +++ G +H+ +T GELY WG N NG
Sbjct: 272 MFGEKSINKMGFG-GVRNATTPSIISEVPY-AEEVACGGYHTCVVTRGGELYTWGSNENG 329
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS-GRL--- 209
LG P+ + L + Q + G++ + A++ V +WG GGS G
Sbjct: 330 CLGTDSTYVSHSPVRVEGPFLESTVS-QVSCGWKHTAAISDNN-VFTWGWGGSHGTFSVD 387
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
GH LG P ++ + V+ + GF H+A + E+
Sbjct: 388 GHSSGGQ-LGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 39/134 (29%), Positives = 66/134 (49%)
Query: 267 VDK-MLFQEGNHARRPSLISGGELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPV 323
+DK +L + ++ GELY WG N +G LG+G + V+ P +V+ + +
Sbjct: 132 LDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGIT-I 190
Query: 324 DQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
V+ G +H+ A+++G ++L+WG GGS G GH S G P ++ E
Sbjct: 191 QSVALGSEHSVAVTDGGEVLSWGGGGS-GRLGH-GHQSS-LFGILRSNSEFTPRLIKELE 247
Query: 383 NVKALQVSCGFNHT 396
+K V+ G H+
Sbjct: 248 GIKVTNVAAGLLHS 261
Score = 91 (37.1 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAISEG-KILTW 344
G + +G +G G + +P + SE P ++V+CG HT ++ G ++ TW
Sbjct: 268 GSAFMFGEKSINKMGFGGVRNATTPSII----SEVPYAEEVACGGYHTCVVTRGGELYTW 323
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G +G D + H + V P F E+ + QVSCG+ HT A+
Sbjct: 324 G-SNENGCLGTDST----YVSH-SPVRVEGP----FLESTVS-QVSCGWKHTAAI 367
Score = 60 (26.2 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISE 338
S G G + G LG GS DV ++ P V + V +SCG+ HTAA+ E
Sbjct: 380 SHGTFSVDGHSSGGQLGHGS-DVDYARPAMVDLGKNVRAV-HISCGFNHTAAVLE 432
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 120/362 (33%), Positives = 173/362 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLGHG-NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 158 EDSLVP--QKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
T P + G K+ + A G+ H+ + +G +Y +G D +
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 268 --------DKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERVQGP 317
+ + Q G +L S G+LY WG N+ G +G+G+ +D SP +V+ P
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC-SPVQVRFP 325
Query: 318 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+ V QVSCGW+HT A++E + WG G + GQLG G VD P
Sbjct: 326 -DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESVDRNFPK 372
Query: 377 IV 378
I+
Sbjct: 373 II 374
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 113/351 (32%), Positives = 173/351 (49%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +H++ L V + G + GQLG + P ++S L ++V ++ G H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 78
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + G E+Y WG G+LG G + P+P K L GI KQ A G +AVT
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA--LHGIRIKQIACGDSHCLAVT 136
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ EG+++K+ AAG H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 187
Query: 254 DENGRVYIFG-------------DRAVDKMLFQEGNHA--------RRPSLIS-GGELYT 291
E+G +Y +G DR V + + G R +S G LYT
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
+G ++ G LG G ++ P +++ S S + Q+S GW+HT A+ S+GK+ WGW
Sbjct: 248 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWN--- 303
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
F GQ+G GN++D P V F ++ K +QVSCG+ HT A+ E
Sbjct: 304 -KF--------GQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 345
Score = 294 (108.6 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 97/302 (32%), Positives = 139/302 (46%)
Query: 123 KEVVQISTGYHHSSAITVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++V+ IS G HS A+ + G++ WG+ +GQLG G A+ P PT++ L G
Sbjct: 15 RKVLIISAGASHSVAL-LSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDGHQIVS 71
Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G + +VA + G +V SWG G GRLGHG S + +TP IK L G+++
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALHGIRI 122
Query: 241 KIAAAGFLHSACIDENGRVYIFG-------------DRAV-DKMLFQEGNHARR------ 280
K A G H + G V +G D V K+ EG +
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAE 182
Query: 281 --PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 337
++ G+LY WG G LG+G PERV E + V+CGW+HT ++S
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK-MSMVACGWRHTISVSY 241
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G + T+GW S GQLGHG+ D++ P + N Q+S G+ HT
Sbjct: 242 SGALYTYGW------------SKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTM 289
Query: 398 AL 399
AL
Sbjct: 290 AL 291
Score = 282 (104.3 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 96/354 (27%), Positives = 154/354 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRLVP--ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-----IFGDRAVDKMLFQ-EG 275
P ++ L + + G+ H+ + +G++Y FG V L Q
Sbjct: 266 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSP 319
Query: 276 NHARRPS-----LISGG-----------ELYTWGSNENGCLGIG-SIDVLHSPERVQGPF 318
R P +S G ++ WG NG LGIG S+D + P+ ++
Sbjct: 320 VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD-RNFPKIIEA-- 376
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF--SEDGHSSGGQLGHGNDV 370
VD S ++ I +W E G + G G+G D+
Sbjct: 377 --LSVDGASGQHIESSNIDPSSGKSWVSPAERYAVVPDETGLTDGSSKGNGGDI 428
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 302 (111.4 bits), Expect = 6.2e-37, Sum P(3) = 6.2e-37
Identities = 79/228 (34%), Positives = 119/228 (52%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNS-NGQLGLGK 159
LG + L P R+ ++ I+T H++AIT GELYMWG+ +G+LGLG
Sbjct: 183 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241
Query: 160 ----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGFF-TMALTKEGQLWNWGANSNYELGRGDN- 299
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
LG + P + LEGV++ A G HS + E G+V +G
Sbjct: 300 --LG------GWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWG 339
Score = 262 (97.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 78/228 (34%), Positives = 112/228 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-G 101
WG G +G LG P + A+A G HT +TE+G +Y G + G
Sbjct: 176 WGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDG 235
Query: 102 QLGISE----NIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+LG+ N G L P ++ L V +S G + A+T +G+L+ WG NSN +LG
Sbjct: 236 RLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELG 295
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G P+P V L G+ Q A G S+A+T GKVLSWG GG G+LG SS
Sbjct: 296 RGDNLGGWEPMP--VPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLG---SSS 350
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
LR+ + P I+ L K+ A+G SA I + G ++++G+
Sbjct: 351 ----LRN--QKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGN 392
Score = 209 (78.6 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 87/307 (28%), Positives = 135/307 (43%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
+ IS G HS +T+DG+L++WGK G+LG G++ + +P L+ +F + +
Sbjct: 104 IGISCGLFHSG-LTIDGDLWIWGKGDGGRLGFGQENSVFVPN------LNPLFEEHSIRC 156
Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
ALG SVA+T G V +WG GG G LGH + T E PR + + K+
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGH----KVY-----TRELVPRRVDDSWDCKIS 207
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLF-------QEGNHARRPSLI---------- 284
A H+A I E+G +Y++G D L EG PS +
Sbjct: 208 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 267
Query: 285 SGGELYT---------WGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCGWKHTA 334
S G +T W N +G D L E + P E + Q++CG H+
Sbjct: 268 SCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSL 327
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
A++E + WG HG GH GQLG + + PT + + K + ++ G +
Sbjct: 328 ALTEEGKVL-SWG--HG-----GH---GQLGSSSLRNQKVPTEIEALADKKIVFIASGGS 376
Query: 395 HTGALLE 401
+ A+ +
Sbjct: 377 SSAAITD 383
Score = 205 (77.2 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 67/226 (29%), Positives = 109/226 (48%)
Query: 42 LWGN--GDYGRLGLGSLESRWRPVVCSAFEKHS-----LKALACGGAHTLFLTETGCVYA 94
+WG GD GRLGLG S K + +++CGG T+ LT+ G ++
Sbjct: 227 MWGREEGD-GRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWN 285
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G N +LG +N+G EP+ + L+ + QI+ G +HS A+T +G++ WG +G
Sbjct: 286 WGANSNYELGRGDNLG-GWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHG 344
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HG 212
QLG + + +PT++E L+ A G S A+T GG++ WG +LG G
Sbjct: 345 QLG--SSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPG 402
Query: 213 ----QESSI-LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
Q + + + FL E P + + + I A+ H+ C+
Sbjct: 403 LPEIQTTPVEVNFLTEEDECQPHKV-----ISISIGAS---HALCL 440
Score = 129 (50.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 54/196 (27%), Positives = 88/196 (44%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGY--SLEPLRISGLKKEVVQ-ISTG 131
++CG H+ LT G ++ G D G+LG EN + +L PL ++ ++ I+ G
Sbjct: 106 ISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPL----FEEHSIRCIALG 160
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVEC-LSGIFTKQAALGFEQ 188
HS A+T G+++ WG G LG +++P + +C +S I T
Sbjct: 161 GLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGT-----H 215
Query: 189 SVAVTGGGKVLSWGAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+ A+T G++ WG G GRLG G G P +K L ++ GF
Sbjct: 216 TAAITESGELYMWGREEGDGRLGLGPGR---GPNEGGGLSVPSKVKALTVPVASVSCGGF 272
Query: 248 LHSACIDENGRVYIFG 263
A E G+++ +G
Sbjct: 273 FTMALTKE-GQLWNWG 287
Score = 90 (36.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 37/141 (26%), Positives = 62/141 (43%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV---- 190
S +T+ +L+ WG+ ++GQLG G + ++ P P V L +F + Q+
Sbjct: 43 SDPVTL--QLFSWGRGASGQLGGGIEEIRMYPSP--VANL--LFRSDQSFSLAQTPGRID 96
Query: 191 AVTGGGKV-LSWGAGGSGRLGHGQ-------ESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A + ++ +S G SG G + LGF + S + P L E ++
Sbjct: 97 ADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRC 156
Query: 243 AAAGFLHSACIDENGRVYIFG 263
A G LHS + G V+ +G
Sbjct: 157 IALGGLHSVALTHQGDVFTWG 177
Score = 77 (32.2 bits), Expect = 6.2e-37, Sum P(3) = 6.2e-37
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
+L G++ +WG +G LG S+ P ++ ++ + ++ G +AAI++G
Sbjct: 328 ALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEA-LADKKIVFIASGGSSSAAITDGGE 386
Query: 342 LTWGWGGS 349
L W WG +
Sbjct: 387 L-WMWGNA 393
Score = 45 (20.9 bits), Expect = 6.2e-37, Sum P(3) = 6.2e-37
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 43 WGNGDYGRLGLGSLESRWRP 62
WG G G+LG G E R P
Sbjct: 53 WGRGASGQLGGGIEEIRMYP 72
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 313 (115.2 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 113/386 (29%), Positives = 176/386 (45%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 2731 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 2787
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 2788 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 2845
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 2846 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 2901
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 2902 -------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2954
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ + P +L G +YTWG + LG GS D + P
Sbjct: 2955 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 3014
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+VQG V ++ G H +E G++ TWG + GQLG G
Sbjct: 3015 RQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG------------DNDEGQLGDGTTN 3061
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 3062 AIQRPRLVAALQGKKVNRVACGSAHT 3087
Score = 310 (114.2 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 90/292 (30%), Positives = 151/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 1846 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 1900
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 1901 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 1959
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 1960 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 2017
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 2018 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 2068
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + ++G+VY +GD D Q+GN R+P+L+ G E
Sbjct: 2069 VHVAVGALHCLAVTDSGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 2116
Score = 292 (107.8 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 1829
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 1830 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 1888
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G
Sbjct: 1889 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1939
Query: 264 ----DRAVD------KMLFQE-------GNH-ARRPSLISGGELYTWGSNENGCLGIGSI 305
D K+L G+ A+ +L G +++WG + G LG G
Sbjct: 1940 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 1999
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 2000 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 2047
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG+DV P +V K + V+ G H A+ +
Sbjct: 2048 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2083
Score = 287 (106.1 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 110/388 (28%), Positives = 182/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VY+ G
Sbjct: 1772 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYSCGEAT 1829
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 1830 NGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 1889
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 1890 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 1944
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 1945 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 1998
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG GS DV + P
Sbjct: 1999 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS-DVHVRKP 2057
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 2058 QVVEGLRGKKIV-HVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGNGTTT 2104
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 2105 VNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 237 (88.5 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 65/205 (31%), Positives = 100/205 (48%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 2719 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 2777
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 2778 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2835
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 2836 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 2886
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLI 284
Y +G ++ + +P L+
Sbjct: 2887 YTWGKGRYGRLGHSDSEDQLKPKLV 2911
Score = 209 (78.6 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 1986 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2045
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G++Y WG N +GQ G G
Sbjct: 2046 LGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--T 2102
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 2103 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2134
Score = 196 (74.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 85/287 (29%), Positives = 126/287 (43%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1762 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1819
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 1820 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 1873
Query: 256 NGRVYIFGD-----------RAVDKMLFQEGNHARR-----------PSLISGGELYTWG 293
+G+V+ +G+ DK E +R +L S GELYTWG
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 1933
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 352
E G LG G P+ V+ + QV+CG + ++ + L + WG G
Sbjct: 1934 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWGD--GD 1990
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
F + G GG G N I +N G+ V Q+ CG + AL
Sbjct: 1991 FGKLGR--GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 2029
Score = 195 (73.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 80/285 (28%), Positives = 122/285 (42%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 2726 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYA 2782
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V +K A +G H + G
Sbjct: 2783 TGYGAGGRLGIGGTESVS---------TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 2833
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
VY +G+ K+ + RP +I + G+LYTWG
Sbjct: 2834 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 2893
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG + P+ V+ +D ++CG T +++ + W WG
Sbjct: 2894 YGRLGHSDSEDQLKPKLVEALQGHRVID-IACGSGDAQTLCLTDDDTV-WSWG------- 2944
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ + ++V CG + AL
Sbjct: 2945 -DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 2986
Score = 141 (54.7 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 54/220 (24%), Positives = 97/220 (44%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--AAG 246
+++ G G + WG G+LG + + + + T R ++ + G + A A G
Sbjct: 2719 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 2778
Query: 247 FLHSACIDENGRVYIFGDRAVDK-MLFQEGNHA--RRPSLISGG----------ELYTWG 293
L++ GR+ I G +V L + H ++ ++ SGG E+Y+WG
Sbjct: 2779 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 2838
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 352
E+G LG G+ P ++ VD V+ G H+A ++ G + TWG G
Sbjct: 2839 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWG----KGR 2893
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+ G+LGH + D + P +V + + + ++CG
Sbjct: 2894 Y--------GRLGHSDSEDQLKPKLVEALQGHRVIDIACG 2925
Score = 137 (53.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 2951 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 3008
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 3009 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 3067
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 3068 LVAALQGKKVNRVACGSAHTLA 3089
Score = 108 (43.1 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S K
Sbjct: 3042 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTSK 3094
Score = 52 (23.4 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES---PVDQVSCG 329
Q G + +P ++ YT ++ +G + I P R +S P D++
Sbjct: 2413 QSGRLSSQPVVVESSHPYTDDTSTSGTVKI--------PGREWSDWSSELRIPGDELK-- 2462
Query: 330 WKHTAAISEGKILTWGW 346
WK IS+G + WGW
Sbjct: 2463 WKF---ISDGSVNGWGW 2476
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 313 (115.2 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 113/386 (29%), Positives = 176/386 (45%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 2767 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 2823
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 2824 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 2881
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 2882 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 2937
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 2938 -------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2990
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ + P +L G +YTWG + LG GS D + P
Sbjct: 2991 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 3050
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+VQG V ++ G H +E G++ TWG + GQLG G
Sbjct: 3051 RQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG------------DNDEGQLGDGTTN 3097
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 3098 AIQRPRLVAALQGKKVNRVACGSAHT 3123
Score = 310 (114.2 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 90/292 (30%), Positives = 151/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 1846 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 1900
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 1901 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 1959
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 1960 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 2017
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 2018 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 2068
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + ++G+VY +GD D Q+GN R+P+L+ G E
Sbjct: 2069 VHVAVGALHCLAVTDSGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 2116
Score = 292 (107.8 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 1829
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 1830 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 1888
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G
Sbjct: 1889 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1939
Query: 264 ----DRAVD------KMLFQE-------GNH-ARRPSLISGGELYTWGSNENGCLGIGSI 305
D K+L G+ A+ +L G +++WG + G LG G
Sbjct: 1940 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 1999
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 2000 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 2047
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG+DV P +V K + V+ G H A+ +
Sbjct: 2048 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2083
Score = 287 (106.1 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 110/388 (28%), Positives = 182/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VY+ G
Sbjct: 1772 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYSCGEAT 1829
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 1830 NGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 1889
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 1890 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 1944
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 1945 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 1998
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG GS DV + P
Sbjct: 1999 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS-DVHVRKP 2057
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 2058 QVVEGLRGKKIV-HVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGNGTTT 2104
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 2105 VNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 237 (88.5 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 65/205 (31%), Positives = 100/205 (48%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 2755 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 2813
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 2814 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2871
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 2872 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 2922
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLI 284
Y +G ++ + +P L+
Sbjct: 2923 YTWGKGRYGRLGHSDSEDQLKPKLV 2947
Score = 209 (78.6 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 1986 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2045
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G++Y WG N +GQ G G
Sbjct: 2046 LGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--T 2102
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 2103 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2134
Score = 196 (74.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 85/287 (29%), Positives = 126/287 (43%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1762 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1819
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 1820 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 1873
Query: 256 NGRVYIFGD-----------RAVDKMLFQEGNHARR-----------PSLISGGELYTWG 293
+G+V+ +G+ DK E +R +L S GELYTWG
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 1933
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 352
E G LG G P+ V+ + QV+CG + ++ + L + WG G
Sbjct: 1934 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWGD--GD 1990
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
F + G GG G N I +N G+ V Q+ CG + AL
Sbjct: 1991 FGKLGR--GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 2029
Score = 195 (73.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 80/285 (28%), Positives = 122/285 (42%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 2762 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYA 2818
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V +K A +G H + G
Sbjct: 2819 TGYGAGGRLGIGGTESVS---------TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 2869
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
VY +G+ K+ + RP +I + G+LYTWG
Sbjct: 2870 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 2929
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG + P+ V+ +D ++CG T +++ + W WG
Sbjct: 2930 YGRLGHSDSEDQLKPKLVEALQGHRVID-IACGSGDAQTLCLTDDDTV-WSWG------- 2980
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ + ++V CG + AL
Sbjct: 2981 -DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3022
Score = 141 (54.7 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 54/220 (24%), Positives = 97/220 (44%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--AAG 246
+++ G G + WG G+LG + + + + T R ++ + G + A A G
Sbjct: 2755 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 2814
Query: 247 FLHSACIDENGRVYIFGDRAVDK-MLFQEGNHA--RRPSLISGG----------ELYTWG 293
L++ GR+ I G +V L + H ++ ++ SGG E+Y+WG
Sbjct: 2815 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 2874
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 352
E+G LG G+ P ++ VD V+ G H+A ++ G + TWG G
Sbjct: 2875 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWG----KGR 2929
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+ G+LGH + D + P +V + + + ++CG
Sbjct: 2930 Y--------GRLGHSDSEDQLKPKLVEALQGHRVIDIACG 2961
Score = 137 (53.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 2987 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 3044
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 3045 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 3103
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 3104 LVAALQGKKVNRVACGSAHTLA 3125
Score = 108 (43.1 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S K
Sbjct: 3078 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTSK 3130
Score = 46 (21.3 bits), Expect = 5.1e-27, Sum P(2) = 5.1e-27
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 322 PVDQVSCGWKHTAAISEGKILTWGW 346
P D++ WK IS+G + WGW
Sbjct: 2493 PGDELK--WKF---ISDGSVNGWGW 2512
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 313 (115.2 bits), Expect = 6.5e-26, P = 6.5e-26
Identities = 113/386 (29%), Positives = 176/386 (45%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3902 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 3958
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 3959 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4016
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4017 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4072
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 4073 -------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4125
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4126 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4185
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+VQG V ++ G H +E G++ TWG + GQLG G
Sbjct: 4186 RQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG------------DNDEGQLGDGTTN 4232
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 4233 AIQRPRLVAALQGKKVNRVACGSAHT 4258
Score = 310 (114.2 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 90/292 (30%), Positives = 151/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 2981 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3035
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3036 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3094
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3095 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3152
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3153 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3203
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + ++G+VY +GD D Q+GN R+P+L+ G E
Sbjct: 3204 VHVAVGALHCLAVTDSGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 3251
Score = 292 (107.8 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2905 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2964
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2965 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3023
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G
Sbjct: 3024 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074
Query: 264 ----DRAVD------KMLFQE-------GNH-ARRPSLISGGELYTWGSNENGCLGIGSI 305
D K+L G+ A+ +L G +++WG + G LG G
Sbjct: 3075 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3134
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 3135 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 3182
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG+DV P +V K + V+ G H A+ +
Sbjct: 3183 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3218
Score = 287 (106.1 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 110/388 (28%), Positives = 182/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VY+ G
Sbjct: 2907 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYSCGEAT 2964
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 2965 NGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3024
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3025 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3079
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3080 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3133
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG GS DV + P
Sbjct: 3134 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS-DVHVRKP 3192
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 3193 QVVEGLRGKKIV-HVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGNGTTT 3239
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 3240 VNRKPTLVQGLEGQKITRVACGSSHSVA 3267
Score = 276 (102.2 bits), Expect = 8.0e-27, Sum P(2) = 8.0e-27
Identities = 74/229 (32%), Positives = 118/229 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ G + A+T +G+++ WG G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ Y P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 641 EHV--------RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 263 (97.6 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 89/287 (31%), Positives = 131/287 (45%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 406 EKRFLILSRNGRVYTQAYNS--DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 463
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 464 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 522
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 523 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 581 GKLGRG------G---SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 631
Query: 267 VDKMLFQEGNHARRPSLISG--GE-LYTWGSNENGCLGIGSIDVLHS 310
++ H R P L+ G G+ + + CL + +HS
Sbjct: 632 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHS 678
Score = 242 (90.2 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 90/321 (28%), Positives = 142/321 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ L P + GL
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-------SD----MLAPQLVQGL 436
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 492
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-- 285
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600
Query: 286 ----------G----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
G G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 601 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 659
Query: 326 VSCGWKHTAAISE-GKILTWG 345
V+ G H A++E ++ +WG
Sbjct: 660 VAAGSTHCLALTEDSEVHSWG 680
Score = 237 (88.5 bits), Expect = 6.1e-21, Sum P(3) = 6.1e-21
Identities = 65/205 (31%), Positives = 100/205 (48%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 3948
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 3949 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4006
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 4007 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4057
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLI 284
Y +G ++ + +P L+
Sbjct: 4058 YTWGKGRYGRLGHSDSEDQLKPKLV 4082
Score = 229 (85.7 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 58/164 (35%), Positives = 88/164 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 581 GKLGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 681
Score = 209 (78.6 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3121 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3180
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3181 LGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--T 3237
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 3238 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3269
Score = 196 (74.1 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 85/287 (29%), Positives = 126/287 (43%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2897 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2954
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3008
Query: 256 NGRVYIFGD-----------RAVDKMLFQEGNHARR-----------PSLISGGELYTWG 293
+G+V+ +G+ DK E +R +L S GELYTWG
Sbjct: 3009 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3068
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 352
E G LG G P+ V+ + QV+CG + ++ + L + WG G
Sbjct: 3069 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWGD--GD 3125
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
F + G GG G N I +N G+ V Q+ CG + AL
Sbjct: 3126 FGKLGR--GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 3164
Score = 195 (73.7 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 80/285 (28%), Positives = 122/285 (42%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 3897 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYA 3953
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V +K A +G H + G
Sbjct: 3954 TGYGAGGRLGIGGTESVS---------TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4004
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
VY +G+ K+ + RP +I + G+LYTWG
Sbjct: 4005 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4064
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG + P+ V+ +D ++CG T +++ + W WG
Sbjct: 4065 YGRLGHSDSEDQLKPKLVEALQGHRVID-IACGSGDAQTLCLTDDDTV-WSWG------- 4115
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ + ++V CG + AL
Sbjct: 4116 -DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4157
Score = 153 (58.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/237 (24%), Positives = 106/237 (44%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G+V SWG G GRLGHG ++ L + S ++ + G V A G +
Sbjct: 454 LALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGKQA----GKHVVHIACGSTY 508
Query: 250 SACIDENGRVYIFG-------------DRAVDKMLFQ-EG----------NHARRPSLIS 285
SA I G +Y +G D A+ ++ +G A+ ++
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 568
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
G++++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +W
Sbjct: 569 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSW 627
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 628 GKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Score = 142 (55.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGW 330
+G+H +L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 449 DGHHYL--ALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGS 506
Query: 331 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
++AAI+ EG++ TWG G + G+LGHG+ D P +V + +K + V
Sbjct: 507 TYSAAITAEGELYTWG----RGNY--------GRLGHGSSEDEAIPMLVAGLKGLKVIDV 554
Query: 390 SCG 392
+CG
Sbjct: 555 ACG 557
Score = 141 (54.7 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 54/220 (24%), Positives = 97/220 (44%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--AAG 246
+++ G G + WG G+LG + + + + T R ++ + G + A A G
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3949
Query: 247 FLHSACIDENGRVYIFGDRAVDK-MLFQEGNHA--RRPSLISGG----------ELYTWG 293
L++ GR+ I G +V L + H ++ ++ SGG E+Y+WG
Sbjct: 3950 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4009
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 352
E+G LG G+ P ++ VD V+ G H+A ++ G + TWG G
Sbjct: 4010 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWG----KGR 4064
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+ G+LGH + D + P +V + + + ++CG
Sbjct: 4065 Y--------GRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4096
Score = 137 (53.3 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4122 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4179
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4180 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4238
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4239 LVAALQGKKVNRVACGSAHTLA 4260
Score = 108 (43.1 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S K
Sbjct: 4213 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTSK 4265
Score = 97 (39.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 43/147 (29%), Positives = 62/147 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND Q
Sbjct: 627 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+ + EP + GL K +V I+ G S A W S +GL +
Sbjct: 687 HFDTLRVTKP-EPTALPGLDTKHIVGIACGPAQSFA---------WSSCSEWSIGL--RV 734
Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFE 187
V+ I P E L + +Q + G +
Sbjct: 735 PFVVDICPVTFEQLD-LLLRQVSEGMD 760
Score = 48 (22.0 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCG 329
+L E+++WGSN+ C ++ V PE P ++ + ++CG
Sbjct: 669 ALTEDSEVHSWGSNDQ-CQHFDTLRVT-KPEPTALPGLDTKHIVGIACG 715
Score = 46 (21.3 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 322 PVDQVSCGWKHTAAISEGKILTWGW 346
P D++ WK IS+G + WGW
Sbjct: 3628 PGDELK--WKF---ISDGSVNGWGW 3647
Score = 38 (18.4 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
+G+GSL ++ +VC+ A + + E CV
Sbjct: 1027 MGVGSLLKKYTALVCTHIGDILPVAASIASSSWQHFAEVACV 1068
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 313 (115.2 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 113/386 (29%), Positives = 176/386 (45%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4072 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4127
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 4128 -------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4181 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+VQG V ++ G H +E G++ TWG + GQLG G
Sbjct: 4241 RQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG------------DNDEGQLGDGTTN 4287
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 4288 AIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 310 (114.2 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 90/292 (30%), Positives = 151/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 3037 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3091
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3092 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3150
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3151 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3208
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3209 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3259
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + ++G+VY +GD D Q+GN R+P+L+ G E
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 3307
Score = 290 (107.1 bits), Expect = 7.8e-22, Sum P(2) = 7.8e-22
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 264 ----DRAVD------KMLFQE-------GNH-ARRPSLISGGELYTWGSNENGCLGIGSI 305
D K+L G+ A+ +L G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 3238
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG+DV P +V K + V+ G H A+ +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274
Score = 289 (106.8 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 111/388 (28%), Positives = 182/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2963 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 3020
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 3021 NGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3080
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3081 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3135
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3136 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3189
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG GS DV + P
Sbjct: 3190 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS-DVHVRKP 3248
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 3249 QVVEGLRGKKIV-HVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGNGTTT 3295
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 277 (102.6 bits), Expect = 6.0e-27, Sum P(2) = 6.0e-27
Identities = 74/229 (32%), Positives = 118/229 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ Y P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV--------RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 264 (98.0 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 89/287 (31%), Positives = 131/287 (45%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 460 EKRFLILSRNGRVYTQAYNS--DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 517
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 518 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 577 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 635 GKLGRG------G---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 267 VDKMLFQEGNHARRPSLISG--GE-LYTWGSNENGCLGIGSIDVLHS 310
++ H R P L+ G G+ + + CL + +HS
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHS 732
Score = 245 (91.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 90/321 (28%), Positives = 143/321 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-------SD----TLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-- 285
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 286 ----------G----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
G G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 326 VSCGWKHTAAISE-GKILTWG 345
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 237 (88.5 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 65/205 (31%), Positives = 100/205 (48%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4004 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 4062 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLI 284
Y +G ++ + +P L+
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 230 (86.0 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 59/164 (35%), Positives = 88/164 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735
Score = 209 (78.6 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3237 LGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--T 3293
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 196 (74.1 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 81/285 (28%), Positives = 122/285 (42%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYA 4008
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V +K A +G H + G
Sbjct: 4009 TGYGAGGRLGIGGTESVS---------TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
VY +G+ K+ + RP +I + G+LYTWG
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG + P+ V+ VD ++CG T +++ + W WG
Sbjct: 4120 YGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTV-WSWG------- 4170
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ + ++V CG + AL
Sbjct: 4171 -DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 194 (73.4 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 85/287 (29%), Positives = 127/287 (44%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGD-----------RAVDKMLFQEGNHARR-----------PSLISGGELYTWG 293
+G+V+ +G+ DK E +R +L S GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 352
E G LG G P+ V+ + QV+CG + ++ + L + WG G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWGD--GD 3181
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
F + G GG G N I +N G+ V Q+ CG + AL
Sbjct: 3182 FGKLGR--GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 3220
Score = 171 (65.3 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 153 (58.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/237 (24%), Positives = 106/237 (44%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G+V SWG G GRLGHG ++ L + S ++ + G V A G +
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGKQA----GKHVVHIACGSTY 562
Query: 250 SACIDENGRVYIFG-------------DRAVDKMLFQ-EG----------NHARRPSLIS 285
SA I G +Y +G D A+ ++ +G A+ ++
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 622
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
G++++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +W
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSW 681
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 682 GKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 142 (55.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGW 330
+G+H +L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 503 DGHHYL--ALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGS 560
Query: 331 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
++AAI+ EG++ TWG G + G+LGHG+ D P +V + +K + V
Sbjct: 561 TYSAAITAEGELYTWG----RGNY--------GRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 390 SCG 392
+CG
Sbjct: 609 ACG 611
Score = 140 (54.3 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 54/220 (24%), Positives = 97/220 (44%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--AAG 246
+++ G G + WG G+LG + + + + T R ++ + G + A A G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 247 FLHSACIDENGRVYIFGDRAVDK-MLFQEGNHA--RRPSLISGG----------ELYTWG 293
L++ GR+ I G +V L + H ++ ++ SGG E+Y+WG
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 352
E+G LG G+ P ++ VD V+ G H+A ++ G + TWG G
Sbjct: 4065 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWG----KGR 4119
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+ G+LGH + D + P +V + + + ++CG
Sbjct: 4120 Y--------GRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151
Score = 137 (53.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4177 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4234
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4235 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4293
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4294 LVAALQGKKVNRVACGSAHTLA 4315
Score = 108 (43.1 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S K
Sbjct: 4268 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTSK 4320
Score = 96 (38.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 32/96 (33%), Positives = 44/96 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND Q
Sbjct: 681 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
+ + EP + GL K +V I+ G S A
Sbjct: 741 HFDTLRVTKP-EPAALPGLDTKHIVGIACGPAQSFA 775
Score = 48 (22.0 bits), Expect = 6.9e-21, Sum P(3) = 6.9e-21
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCG 329
+L E+++WGSN+ C ++ V PE P ++ + ++CG
Sbjct: 723 ALTEDSEVHSWGSNDQ-CQHFDTLRVT-KPEPAALPGLDTKHIVGIACG 769
Score = 46 (21.3 bits), Expect = 9.5e-27, Sum P(2) = 9.5e-27
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 322 PVDQVSCGWKHTAAISEGKILTWGW 346
P D++ WK IS+G + WGW
Sbjct: 3683 PGDELK--WKF---ISDGSVNGWGW 3702
Score = 44 (20.5 bits), Expect = 6.9e-21, Sum P(3) = 6.9e-21
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 373 IHPTIVNFGENVKALQVSC 391
IHPT + F + LQ C
Sbjct: 1957 IHPTAMMFTSTINLLQTLC 1975
Score = 37 (18.1 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL 76
N D + + S + +W+P++ + H K L
Sbjct: 1591 NVDKRPIAIKSPKDKWQPLLSTVTGVHKYKWL 1622
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 313 (115.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 113/386 (29%), Positives = 176/386 (45%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 4015
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4074 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4129
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 4130 -------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4183 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4242
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+VQG V ++ G H +E G++ TWG + GQLG G
Sbjct: 4243 RQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG------------DNDEGQLGDGTTN 4289
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 4290 AIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 310 (114.2 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 90/292 (30%), Positives = 151/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 3038 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3092
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3093 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3151
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3152 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3209
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3210 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3260
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + ++G+VY +GD D Q+GN R+P+L+ G E
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 3308
Score = 292 (107.8 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 264 ----DRAVD------KMLFQE-------GNH-ARRPSLISGGELYTWGSNENGCLGIGSI 305
D K+L G+ A+ +L G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 3239
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG+DV P +V K + V+ G H A+ +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275
Score = 287 (106.1 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 110/388 (28%), Positives = 182/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VY+ G
Sbjct: 2964 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYSCGEAT 3021
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 3022 NGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3081
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3082 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3136
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3137 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3190
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG GS DV + P
Sbjct: 3191 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS-DVHVRKP 3249
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 3250 QVVEGLRGKKIV-HVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGNGTTT 3296
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 276 (102.2 bits), Expect = 8.2e-27, Sum P(2) = 8.2e-27
Identities = 74/229 (32%), Positives = 118/229 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ Y P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV--------RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 263 (97.6 bits), Expect = 5.0e-25, Sum P(2) = 5.0e-25
Identities = 89/287 (31%), Positives = 131/287 (45%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 461 EKRFLILSRNGRVYTQAYNS--DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 519 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 578 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 636 GKLGRG------G---SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 267 VDKMLFQEGNHARRPSLISG--GE-LYTWGSNENGCLGIGSIDVLHS 310
++ H R P L+ G G+ + + CL + +HS
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHS 733
Score = 242 (90.2 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 90/321 (28%), Positives = 142/321 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-------SD----MLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-- 285
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 286 ----------G----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
G G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 326 VSCGWKHTAAISE-GKILTWG 345
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 237 (88.5 bits), Expect = 6.4e-21, Sum P(3) = 6.4e-21
Identities = 65/205 (31%), Positives = 100/205 (48%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 4005
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4006 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 4064 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4114
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLI 284
Y +G ++ + +P L+
Sbjct: 4115 YTWGKGRYGRLGHSDSEDQLKPKLV 4139
Score = 229 (85.7 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 58/164 (35%), Positives = 88/164 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Score = 209 (78.6 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3238 LGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--T 3294
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 196 (74.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 85/287 (29%), Positives = 126/287 (43%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3065
Query: 256 NGRVYIFGD-----------RAVDKMLFQEGNHARR-----------PSLISGGELYTWG 293
+G+V+ +G+ DK E +R +L S GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 352
E G LG G P+ V+ + QV+CG + ++ + L + WG G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWGD--GD 3182
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
F + G GG G N I +N G+ V Q+ CG + AL
Sbjct: 3183 FGKLGR--GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 3221
Score = 195 (73.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 80/285 (28%), Positives = 122/285 (42%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYA 4010
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V +K A +G H + G
Sbjct: 4011 TGYGAGGRLGIGGTESVS---------TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
VY +G+ K+ + RP +I + G+LYTWG
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4121
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG + P+ V+ +D ++CG T +++ + W WG
Sbjct: 4122 YGRLGHSDSEDQLKPKLVEALQGHRVID-IACGSGDAQTLCLTDDDTV-WSWG------- 4172
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ + ++V CG + AL
Sbjct: 4173 -DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Score = 174 (66.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 48/152 (31%), Positives = 73/152 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 153 (58.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/237 (24%), Positives = 106/237 (44%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G+V SWG G GRLGHG ++ L + S ++ + G V A G +
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGKQA----GKHVVHIACGSTY 563
Query: 250 SACIDENGRVYIFG-------------DRAVDKMLFQ-EG----------NHARRPSLIS 285
SA I G +Y +G D A+ ++ +G A+ ++
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
G++++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +W
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSW 682
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 683 GKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 142 (55.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGW 330
+G+H +L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 504 DGHHYL--ALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGS 561
Query: 331 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
++AAI+ EG++ TWG G + G+LGHG+ D P +V + +K + V
Sbjct: 562 TYSAAITAEGELYTWG----RGNY--------GRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 390 SCG 392
+CG
Sbjct: 610 ACG 612
Score = 141 (54.7 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 54/220 (24%), Positives = 97/220 (44%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--AAG 246
+++ G G + WG G+LG + + + + T R ++ + G + A A G
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 247 FLHSACIDENGRVYIFGDRAVDK-MLFQEGNHA--RRPSLISGG----------ELYTWG 293
L++ GR+ I G +V L + H ++ ++ SGG E+Y+WG
Sbjct: 4007 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4066
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 352
E+G LG G+ P ++ VD V+ G H+A ++ G + TWG G
Sbjct: 4067 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWG----KGR 4121
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+ G+LGH + D + P +V + + + ++CG
Sbjct: 4122 Y--------GRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4153
Score = 137 (53.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4179 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4236
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4237 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4295
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4296 LVAALQGKKVNRVACGSAHTLA 4317
Score = 108 (43.1 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S K
Sbjct: 4270 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTSK 4322
Score = 51 (23.0 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCG 329
+L E+++WGSN+ C ++ V PE P +S + ++CG
Sbjct: 724 ALTEDSEVHSWGSNDQ-CQHFDTLRVT-KPEPTALPGLDSKHIVGIACG 770
Score = 46 (21.3 bits), Expect = 9.5e-27, Sum P(2) = 9.5e-27
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 322 PVDQVSCGWKHTAAISEGKILTWGW 346
P D++ WK IS+G + WGW
Sbjct: 3685 PGDELK--WKF---ISDGSVNGWGW 3704
Score = 38 (18.4 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
+G+GSL ++ +VC+ A + + E CV
Sbjct: 1084 MGVGSLLKKYTALVCTHIGDILPVAASIASSSWQHFAEVACV 1125
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 315 (115.9 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 113/388 (29%), Positives = 177/388 (45%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4076
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4077 GHGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD-- 4132
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 4133 -------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4186 GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4245
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE---GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
+VQG V ++ G H +E G++ TWG + GQLG G
Sbjct: 4246 RQVQG-LQGKKVIAIATGSLHCVCCTEDGLGEVYTWG------------DNDEGQLGDGT 4292
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 4293 TNAIQRPRLVAALQGKKINRVACGSAHT 4320
Score = 309 (113.8 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 89/292 (30%), Positives = 151/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +P
Sbjct: 3041 RQITALSNYVVK---KVAVHSG-GRHAMALTVDGKIFS-WGEGDDGKLGHFSRMNCDKPR 3095
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 3096 LIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3154
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3155 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3212
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3213 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV----RK-----PQVVEGLRGKKI 3263
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + + G+VY +GD D Q+GN R+P+L+ G E
Sbjct: 3264 VHVAVGALHCLAVTDTGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 3311
Score = 291 (107.5 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 264 ----DRAVD------KMLFQE-------GNH-ARRPSLISGGELYTWGSNENGCLGIGSI 305
D K+L G+ A+ +L G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 3242
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG DV P +V K + V+ G H A+ +
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278
Score = 287 (106.1 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 110/388 (28%), Positives = 181/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2967 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 3024
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H+ A+TVDG+++ WG+ +G+LG
Sbjct: 3025 NGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLG 3084
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3085 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD--- 3139
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3140 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3193
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG G+ DV + P
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT-DVHVRKP 3252
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 3253 QVVEGLRGKKIV-HVAVGALHCLAVTDTGQVYAWG---------DNDH---GQQGNGTTT 3299
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 3300 VNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 278 (102.9 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 96/342 (28%), Positives = 155/342 (45%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4009 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSACI G +
Sbjct: 4067 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDIAAGGAHSACITAAGDL 4117
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISG-------------GE-----------LYTWGSN 295
+ +G ++ + +P L+ G+ +++WG
Sbjct: 4118 FTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4177
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS 354
+ G LG G D P ++ ++ V +V CG + + A+++ G + TWG G H
Sbjct: 4178 DYGKLGRGGSDGCKVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYH---- 4232
Query: 355 EDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNH 395
+LGHG+D D++ P V + K + ++ G H
Sbjct: 4233 --------RLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLH 4265
Score = 267 (99.0 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 72/229 (31%), Positives = 117/229 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ Y P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV--------RY-PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 265 (98.3 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 87/285 (30%), Positives = 136/285 (47%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLFLTETGCVYA 94
++RF L NG S ++ +V S ++ +K A G H L L+ G V++
Sbjct: 461 EKRFLILSRNGRVYTQAYNS-DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFS 519
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWGK 149
G D G+LG + + EP IS L K VV I+ G +S+AIT +GELY WG+
Sbjct: 520 WGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGR 578
Query: 150 NSNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+ G+LG G + IP + T ++ L + G Q++AVT G+V SWG G G+
Sbjct: 579 GNYGRLGHGSSEDQTIPMLVTGLKGLK-VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG G G S TP+LI++L+ + + G S + ++G+VY +G
Sbjct: 638 LGRG------G---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQ 688
Query: 269 KMLFQEGNHARRPSLISG--GE-LYTWGSNENGCLGIGSIDVLHS 310
++ H R P L+ G G+ + + CL + +HS
Sbjct: 689 RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHS 733
Score = 244 (91.0 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 89/319 (27%), Positives = 143/319 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISG 120
P+ C + +AC L L+ G VY N S+ +G L + L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLGPQLVQSLASRN 495
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSGIF 178
+ K + S G HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 496 IVK-IAAHSDG-HHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKLISALSG-- 547
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S + P L
Sbjct: 548 -KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIPML 597
Query: 232 IKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---- 285
+ L+G+KV ++ +G + + ENG+V+ +GD K+ + + P LI
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657
Query: 286 --------G----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
G G++YTWG +N LG G+ + + P+ ++G + +D V+
Sbjct: 658 LDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID-VA 716
Query: 328 CGWKHTAAISE-GKILTWG 345
G H A++E ++ +WG
Sbjct: 717 AGSTHCLALTEDSEVHSWG 735
Score = 228 (85.3 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 57/164 (34%), Positives = 89/164 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ + + + ++CG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCKT-PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Score = 207 (77.9 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3181 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3240
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3241 LGHGTDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--T 3297
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 3298 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 196 (74.1 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 80/285 (28%), Positives = 124/285 (43%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYA 4013
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V +K A +G H + G
Sbjct: 4014 TGYGAGGRLGIGGTESVS---------TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
VY +G+ K+ + RP +I + G+L+TWG
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGR 4124
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG G + P+ V+ +D ++CG T +++ + W WG
Sbjct: 4125 YGRLGHGDSEDQLKPKLVEALQGYRVID-IACGSGDAQTLCLTDDDTV-WSWG------- 4175
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ ++ ++V CG + AL
Sbjct: 4176 -DGDY--GKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVAL 4217
Score = 192 (72.6 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 83/281 (29%), Positives = 126/281 (44%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL---EGVKVKIAAA--GFLHS 250
GKV + G +GRLG G S + R + + ++K++ G + +A G + S
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARR-----------PSLISGGELYTWGSNENGC 299
++G++ F DK E +R ++ S GELYTWG E G
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 358
LG G P+ V+ + QV+CG + ++ + L + WG G F + G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWGD--GDFGKLGR 3191
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GG G N I +N G+ V Q+ CG + AL
Sbjct: 3192 --GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 3224
Score = 175 (66.7 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 39/115 (33%), Positives = 60/115 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG E++ Y P + GLK K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 146 (56.5 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGW 330
+G+H +L + GE+++WG + G LG G L P+ + G + V ++CG
Sbjct: 504 DGHHYL--ALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGS 561
Query: 331 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
++AAI+ EG++ TWG G + G+LGHG+ D P +V + +K + V
Sbjct: 562 TYSAAITAEGELYTWG----RGNY--------GRLGHGSSEDQTIPMLVTGLKGLKVIDV 609
Query: 390 SCG 392
SCG
Sbjct: 610 SCG 612
Score = 107 (42.7 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S K
Sbjct: 4275 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTSK 4327
Score = 96 (38.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 33/96 (34%), Positives = 44/96 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND Q
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
+ I EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRITKP-EPAALPGLDTKHIVGIACGPAQSFA 776
Score = 47 (21.6 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCG 329
+L E+++WGSN+ C ++ + PE P ++ + ++CG
Sbjct: 724 ALTEDSEVHSWGSNDQ-CQHFDTLRIT-KPEPAALPGLDTKHIVGIACG 770
Score = 46 (21.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 322 PVDQVSCGWKHTAAISEGKILTWGW 346
P D++ WK IS+G + WGW
Sbjct: 3688 PGDELK--WKF---ISDGSVNGWGW 3707
Score = 37 (18.1 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 50 RLGLGSLESRWRPVVCS 66
+LG+GSL ++ ++C+
Sbjct: 1083 QLGVGSLLKKYTALLCT 1099
Score = 37 (18.1 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 367 GNDVDY-IHPTIVNFGENVKALQVSC 391
G V+ +HPT + V LQ C
Sbjct: 1952 GEQVERNLHPTSMMLTSTVNLLQTLC 1977
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 315 (115.9 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 113/388 (29%), Positives = 177/388 (45%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4076
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4077 GHGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD-- 4132
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 4133 -------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4186 GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4245
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE---GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
+VQG V ++ G H +E G++ TWG + GQLG G
Sbjct: 4246 RQVQG-LQGKKVIAIATGSLHCVCCTEDGLGEVYTWG------------DNDEGQLGDGT 4292
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 4293 TNAIQRPRLVAALQGKKINRVACGSAHT 4320
Score = 309 (113.8 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 89/292 (30%), Positives = 151/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +P
Sbjct: 3041 RQITALSNYVVK---KVAVHSG-GRHAMALTVDGKIFS-WGEGDDGKLGHFSRMNCDKPR 3095
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 3096 LIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3154
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3155 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3212
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3213 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV----RK-----PQVVEGLRGKKI 3263
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + + G+VY +GD D Q+GN R+P+L+ G E
Sbjct: 3264 VHVAVGALHCLAVTDTGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 3311
Score = 291 (107.5 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 264 ----DRAVD------KMLFQE-------GNH-ARRPSLISGGELYTWGSNENGCLGIGSI 305
D K+L G+ A+ +L G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 3242
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG DV P +V K + V+ G H A+ +
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278
Score = 287 (106.1 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 110/388 (28%), Positives = 181/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2967 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 3024
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H+ A+TVDG+++ WG+ +G+LG
Sbjct: 3025 NGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLG 3084
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3085 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD--- 3139
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3140 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3193
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG G+ DV + P
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT-DVHVRKP 3252
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 3253 QVVEGLRGKKIV-HVAVGALHCLAVTDTGQVYAWG---------DNDH---GQQGNGTTT 3299
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 3300 VNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 278 (102.9 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 96/342 (28%), Positives = 155/342 (45%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4009 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSACI G +
Sbjct: 4067 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDIAAGGAHSACITAAGDL 4117
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISG-------------GE-----------LYTWGSN 295
+ +G ++ + +P L+ G+ +++WG
Sbjct: 4118 FTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4177
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS 354
+ G LG G D P ++ ++ V +V CG + + A+++ G + TWG G H
Sbjct: 4178 DYGKLGRGGSDGCKVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYH---- 4232
Query: 355 EDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNH 395
+LGHG+D D++ P V + K + ++ G H
Sbjct: 4233 --------RLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLH 4265
Score = 267 (99.0 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 72/229 (31%), Positives = 117/229 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ Y P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV--------RY-PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 265 (98.3 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 87/285 (30%), Positives = 136/285 (47%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLFLTETGCVYA 94
++RF L NG S ++ +V S ++ +K A G H L L+ G V++
Sbjct: 461 EKRFLILSRNGRVYTQAYNS-DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFS 519
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWGK 149
G D G+LG + + EP IS L K VV I+ G +S+AIT +GELY WG+
Sbjct: 520 WGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGR 578
Query: 150 NSNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+ G+LG G + IP + T ++ L + G Q++AVT G+V SWG G G+
Sbjct: 579 GNYGRLGHGSSEDQTIPMLVTGLKGLK-VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG G G S TP+LI++L+ + + G S + ++G+VY +G
Sbjct: 638 LGRG------G---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQ 688
Query: 269 KMLFQEGNHARRPSLISG--GE-LYTWGSNENGCLGIGSIDVLHS 310
++ H R P L+ G G+ + + CL + +HS
Sbjct: 689 RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHS 733
Score = 244 (91.0 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 89/319 (27%), Positives = 143/319 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISG 120
P+ C + +AC L L+ G VY N S+ +G L + L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLGPQLVQSLASRN 495
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSGIF 178
+ K + S G HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 496 IVK-IAAHSDG-HHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKLISALSG-- 547
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S + P L
Sbjct: 548 -KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIPML 597
Query: 232 IKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---- 285
+ L+G+KV ++ +G + + ENG+V+ +GD K+ + + P LI
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657
Query: 286 --------G----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
G G++YTWG +N LG G+ + + P+ ++G + +D V+
Sbjct: 658 LDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID-VA 716
Query: 328 CGWKHTAAISE-GKILTWG 345
G H A++E ++ +WG
Sbjct: 717 AGSTHCLALTEDSEVHSWG 735
Score = 228 (85.3 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 57/164 (34%), Positives = 89/164 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ + + + ++CG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCKT-PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Score = 207 (77.9 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3181 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3240
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3241 LGHGTDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--T 3297
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 3298 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 196 (74.1 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 80/285 (28%), Positives = 124/285 (43%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYA 4013
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V +K A +G H + G
Sbjct: 4014 TGYGAGGRLGIGGTESVS---------TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
VY +G+ K+ + RP +I + G+L+TWG
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGR 4124
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG G + P+ V+ +D ++CG T +++ + W WG
Sbjct: 4125 YGRLGHGDSEDQLKPKLVEALQGYRVID-IACGSGDAQTLCLTDDDTV-WSWG------- 4175
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ ++ ++V CG + AL
Sbjct: 4176 -DGDY--GKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVAL 4217
Score = 192 (72.6 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 83/281 (29%), Positives = 126/281 (44%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL---EGVKVKIAAA--GFLHS 250
GKV + G +GRLG G S + R + + ++K++ G + +A G + S
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARR-----------PSLISGGELYTWGSNENGC 299
++G++ F DK E +R ++ S GELYTWG E G
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 358
LG G P+ V+ + QV+CG + ++ + L + WG G F + G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWGD--GDFGKLGR 3191
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GG G N I +N G+ V Q+ CG + AL
Sbjct: 3192 --GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 3224
Score = 175 (66.7 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 39/115 (33%), Positives = 60/115 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG E++ Y P + GLK K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 146 (56.5 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGW 330
+G+H +L + GE+++WG + G LG G L P+ + G + V ++CG
Sbjct: 504 DGHHYL--ALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGS 561
Query: 331 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
++AAI+ EG++ TWG G + G+LGHG+ D P +V + +K + V
Sbjct: 562 TYSAAITAEGELYTWG----RGNY--------GRLGHGSSEDQTIPMLVTGLKGLKVIDV 609
Query: 390 SCG 392
SCG
Sbjct: 610 SCG 612
Score = 107 (42.7 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S K
Sbjct: 4275 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTSK 4327
Score = 96 (38.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 33/96 (34%), Positives = 44/96 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND Q
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
+ I EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRITKP-EPAALPGLDTKHIVGIACGPAQSFA 776
Score = 47 (21.6 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCG 329
+L E+++WGSN+ C ++ + PE P ++ + ++CG
Sbjct: 724 ALTEDSEVHSWGSNDQ-CQHFDTLRIT-KPEPAALPGLDTKHIVGIACG 770
Score = 46 (21.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 322 PVDQVSCGWKHTAAISEGKILTWGW 346
P D++ WK IS+G + WGW
Sbjct: 3688 PGDELK--WKF---ISDGSVNGWGW 3707
Score = 37 (18.1 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 50 RLGLGSLESRWRPVVCS 66
+LG+GSL ++ ++C+
Sbjct: 1083 QLGVGSLLKKYTALLCT 1099
Score = 37 (18.1 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 367 GNDVDY-IHPTIVNFGENVKALQVSC 391
G V+ +HPT + V LQ C
Sbjct: 1952 GEQVERNLHPTSMMLTSTVNLLQTLC 1977
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 357 (130.7 bits), Expect = 5.3e-33, Sum P(2) = 5.3e-33
Identities = 106/347 (30%), Positives = 168/347 (48%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TS P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 --KQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P+L+ G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSH--GTFSEDGHSS 360
S V Q++CG +HT+A S G+I ++G GG+ GT S S
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337
Score = 321 (118.1 bits), Expect = 3.6e-29, Sum P(2) = 3.6e-29
Identities = 94/297 (31%), Positives = 138/297 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 282 -------SLI---------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
S++ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 224 (83.9 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 93/334 (27%), Positives = 138/334 (41%)
Query: 96 GLNDFGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
G +GQLG I E I LEP + + K+V + G H+ + DG +Y G N
Sbjct: 5 GNASYGQLGLGGIDEEI--VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG- 210
GQLG K K P +V L + G ++A+ G+V +WG G+LG
Sbjct: 63 LGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G E I PR IK L +++ A G+ HS + + V+ +G ++
Sbjct: 119 QGSEECIR---------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 271 -LFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDV 307
L E P LI G ++ WG N+ G LG+ +
Sbjct: 170 GLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ P ++ S+ V + CG HTAA++ EG + T+G GG GQLGH
Sbjct: 230 RYVPNLLKSLRSQKIV-YICCGEDHTAALTKEGGVFTFGAGGY------------GQLGH 276
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ I+P V Q++CG HT A +
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 69/279 (24%), Positives = 113/279 (40%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKMLFQEGNHA--RRP----------------------SLISGGELYTWGSNENGCLGI 302
D L +G+ R P +L E++ WG N+ G LG+
Sbjct: 113 -DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 303 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
G SP+ ++ P QV+ G H+ ++ G I +GWG +
Sbjct: 172 GIECQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAI--FGWG----------RNK 218
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG ++ D P ++ + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 42 (19.8 bits), Expect = 5.3e-33, Sum P(2) = 5.3e-33
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 351 GTFSEDGHSSGGQLGHGNDVDY 372
GTFS G +G L ND Y
Sbjct: 428 GTFSSSGCLNGSFLAVSNDDHY 449
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 309 (113.8 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 112/386 (29%), Positives = 173/386 (44%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3880 WGHNHRGQLG-GIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGA 3936
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 3937 GGRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3994
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 3995 GHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4050
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V A G + C+ ++ V+ +GD K+
Sbjct: 4051 -------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4103
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4104 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4163
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+VQG V ++ G H SE G++ TWG D GQLG G
Sbjct: 4164 RQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWG----------DNDE--GQLGDGTTN 4210
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 4211 AIQRPRLVAALQGKKVNRVACGSAHT 4236
Score = 307 (113.1 bits), Expect = 6.1e-33, Sum P(2) = 6.1e-33
Identities = 90/292 (30%), Positives = 150/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 2958 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3012
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3013 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3071
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3072 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3129
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3130 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3180
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + + G+VY +GD D Q+GN R+P+L+ G E
Sbjct: 3181 VHVAVGALHCLAVTDAGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 3228
Score = 290 (107.1 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2882 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2941
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2942 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3000
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G
Sbjct: 3001 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3051
Query: 264 ----DRAVD------KMLFQE-------GNH-ARRPSLISGGELYTWGSNENGCLGIGSI 305
D K+L G+ A+ +L G +++WG + G LG G
Sbjct: 3052 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3111
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 3112 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 3159
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG+DV P +V K + V+ G H A+ +
Sbjct: 3160 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3195
Score = 289 (106.8 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 111/388 (28%), Positives = 182/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2884 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 2941
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 2942 NGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3001
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3002 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3056
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3057 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3110
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG GS DV + P
Sbjct: 3111 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS-DVHVRKP 3169
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 3170 QVVEGLRGKKIV-HVAVGALHCLAVTDAGQVYAWG---------DNDH---GQQGNGTTT 3216
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 3217 VNRKPTLVQGLEGQKITRVACGSSHSVA 3244
Score = 278 (102.9 bits), Expect = 4.2e-27, Sum P(2) = 4.2e-27
Identities = 75/229 (32%), Positives = 118/229 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 430 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 488
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ G + A+T +G+++ WG G+
Sbjct: 489 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 547
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 548 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 605
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ Y P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 606 EHV--------RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 645
Score = 276 (102.2 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 96/342 (28%), Positives = 153/342 (44%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3868 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAVTAD 3926
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 3927 GKLYATGYGAGGRLGVG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3984
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G +V AAG HSAC+ G +
Sbjct: 3985 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGTEVVDVAAGGAHSACVTAAGDL 4035
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISG-------------GE-----------LYTWGSN 295
Y +G ++ + +P L+ G+ +++WG
Sbjct: 4036 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDG 4095
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS 354
+ G LG G D P ++ + V +V CG + + A+++ G + TWG G H
Sbjct: 4096 DYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH---- 4150
Query: 355 EDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNH 395
+LGHG+D D++ P V + K + ++ G H
Sbjct: 4151 --------RLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLH 4183
Score = 265 (98.3 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 89/287 (31%), Positives = 131/287 (45%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 371 EKRFLILSRNGRVYTQAYNS--DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 428
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 429 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 487
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 488 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 545
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 546 GKLGRG------G---SDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGD 596
Query: 267 VDKMLFQEGNHARRPSLISG--GE-LYTWGSNENGCLGIGSIDVLHS 310
++ H R P L+ G G+ + + CL + +HS
Sbjct: 597 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHS 643
Score = 245 (91.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 90/321 (28%), Positives = 143/321 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +L P + GL
Sbjct: 353 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-------SD----TLAPQLVQGL 401
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 402 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 457
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 458 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 505
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-- 285
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 565
Query: 286 ----------G----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
G G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 566 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 624
Query: 326 VSCGWKHTAAISE-GKILTWG 345
V+ G H A++E ++ +WG
Sbjct: 625 VAAGSTHCLALTEDSEVHSWG 645
Score = 230 (86.0 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 59/164 (35%), Positives = 88/164 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 486 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 545
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 546 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGT 604
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 605 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 646
Score = 207 (77.9 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3098 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3157
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3158 LGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--T 3214
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 3215 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3246
Score = 199 (75.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 82/285 (28%), Positives = 122/285 (42%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 3875 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYA 3931
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V +K A +G H + G
Sbjct: 3932 TGYGAGGRLGVGGTESVS---------TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3982
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
VY +G+ K+ + RP +I + G+LYTWG
Sbjct: 3983 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGR 4042
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG + P+ V+ VD V+CG T +++ + W WG
Sbjct: 4043 YGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTV-WSWG------- 4093
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ + ++V CG + AL
Sbjct: 4094 -DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4135
Score = 194 (73.4 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 85/287 (29%), Positives = 127/287 (44%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2874 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2931
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2932 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 2985
Query: 256 NGRVYIFGD-----------RAVDKMLFQEGNHARR-----------PSLISGGELYTWG 293
+G+V+ +G+ DK E +R +L S GELYTWG
Sbjct: 2986 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3045
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 352
E G LG G P+ V+ + QV+CG + ++ + L + WG G
Sbjct: 3046 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWGD--GD 3102
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
F + G GG G N I +N G+ V Q+ CG + AL
Sbjct: 3103 FGKLGR--GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 3141
Score = 171 (65.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 50/155 (32%), Positives = 76/155 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 540 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 599
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 600 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 656
Query: 160 KAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVA 191
+ K P P+ L G+ TK A G QS A
Sbjct: 657 RVTK--PEPS---ALPGLDTKHIVGIACGPAQSFA 686
Score = 154 (59.3 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 59/237 (24%), Positives = 106/237 (44%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G+V SWG G GRLGHG ++ L + S ++ + G V A G +
Sbjct: 419 LALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGKQA----GKHVVHIACGSTY 473
Query: 250 SACIDENGRVYIFG-------------DRAVDKMLFQ-EG----------NHARRPSLIS 285
SA I G +Y +G D A+ ++ +G A+ ++
Sbjct: 474 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 533
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
G++++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +W
Sbjct: 534 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSW 592
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 593 GKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 637
Score = 142 (55.0 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGW 330
+G+H +L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 414 DGHHYL--ALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGS 471
Query: 331 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
++AAI+ EG++ TWG G + G+LGHG+ D P +V + +K + V
Sbjct: 472 TYSAAITAEGELYTWG----RGNY--------GRLGHGSSEDEAIPMLVAGLKGLKVIDV 519
Query: 390 SCG 392
+CG
Sbjct: 520 ACG 522
Score = 133 (51.9 bits), Expect = 0.00018, P = 0.00018
Identities = 47/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4100 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4157
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + +E G VY G ND GQLG P
Sbjct: 4158 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4216
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4217 LVAALQGKKVNRVACGSAHTLA 4238
Score = 108 (43.1 bits), Expect = 6.1e-33, Sum P(2) = 6.1e-33
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S K
Sbjct: 4191 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTSK 4243
Score = 47 (21.6 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCG 329
+L E+++WGSN+ C ++ V P + G ++ V ++CG
Sbjct: 634 ALTEDSEVHSWGSNDQ-CQHFDTLRVTKPEPSALPGLDTKHIVG-IACG 680
Score = 46 (21.3 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 322 PVDQVSCGWKHTAAISEGKILTWGW 346
P D++ WK IS+G + WGW
Sbjct: 3606 PGDELK--WKF---ISDGSVNGWGW 3625
Score = 39 (18.8 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 373 IHPTIVNFGENVKALQVSC 391
IHPT + V LQ C
Sbjct: 1873 IHPTAMMLTSTVNLLQTLC 1891
Score = 37 (18.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 172 ECLSGIFTKQAALGFEQSVAVT 193
ECLS + +Q AL QS T
Sbjct: 25 ECLSVLVKEQQALAI-QSATTT 45
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 312 (114.9 bits), Expect = 8.5e-26, P = 8.5e-26
Identities = 112/386 (29%), Positives = 174/386 (45%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 4016
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4017 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4074
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4130
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V A G + C+ ++ V+ +GD K+
Sbjct: 4131 -------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4184 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4243
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+VQG V ++ G H +E G++ TWG + GQLG G
Sbjct: 4244 RQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG------------DNDEGQLGDGTTN 4290
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 4291 AIQRPRLVAALQGKKVNRVACGSAHT 4316
Score = 307 (113.1 bits), Expect = 6.3e-33, Sum P(2) = 6.3e-33
Identities = 90/292 (30%), Positives = 150/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 3038 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3092
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3093 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3151
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3152 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3209
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3210 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3260
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + + G+VY +GD D Q+GN R+P+L+ G E
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 3308
Score = 291 (107.5 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 264 ----DRAVD------KMLFQE-------GNH-ARRPSLISGGELYTWGSNENGCLGIGSI 305
D K+L G+ A+ +L G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 3239
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG+DV P +V K + V+ G H A+ +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275
Score = 289 (106.8 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 111/388 (28%), Positives = 182/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2964 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 3021
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 3022 NGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3081
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3082 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3136
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3137 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3190
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG GS DV + P
Sbjct: 3191 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS-DVHVRKP 3249
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 3250 QVVEGLRGKKIV-HVAVGALHCLAVTDAGQVYAWG---------DNDH---GQQGNGTTT 3296
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 277 (102.6 bits), Expect = 6.0e-27, Sum P(2) = 6.0e-27
Identities = 74/229 (32%), Positives = 118/229 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ Y P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV--------RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 264 (98.0 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 89/287 (31%), Positives = 131/287 (45%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 461 EKRFLILSRNGRVYTQAYNS--DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 519 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 578 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 636 GKLGRG------G---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 267 VDKMLFQEGNHARRPSLISG--GE-LYTWGSNENGCLGIGSIDVLHS 310
++ H R P L+ G G+ + + CL + +HS
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHS 733
Score = 245 (91.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 90/321 (28%), Positives = 143/321 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-------SD----TLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-- 285
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 286 ----------G----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
G G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 326 VSCGWKHTAAISE-GKILTWG 345
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 237 (88.5 bits), Expect = 8.1e-22, Sum P(2) = 8.1e-22
Identities = 65/205 (31%), Positives = 100/205 (48%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 4006
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4007 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 4065 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4115
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLI 284
Y +G ++ + +P L+
Sbjct: 4116 YTWGKGRYGRLGHSDSEDQLKPKLV 4140
Score = 230 (86.0 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 59/164 (35%), Positives = 88/164 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Score = 207 (77.9 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3238 LGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--T 3294
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 197 (74.4 bits), Expect = 9.0e-24, Sum P(2) = 9.0e-24
Identities = 82/285 (28%), Positives = 122/285 (42%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYA 4011
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V +K A +G H + G
Sbjct: 4012 TGYGAGGRLGIGGTESVS---------TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4062
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
VY +G+ K+ + RP +I + G+LYTWG
Sbjct: 4063 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4122
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG + P+ V+ VD V+CG T +++ + W WG
Sbjct: 4123 YGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTV-WSWG------- 4173
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ + ++V CG + AL
Sbjct: 4174 -DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215
Score = 195 (73.7 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 85/287 (29%), Positives = 127/287 (44%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3065
Query: 256 NGRVYIFGD-----------RAVDKMLFQEGNHARR-----------PSLISGGELYTWG 293
+G+V+ +G+ DK E +R +L S GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 352
E G LG G P+ V+ + QV+CG + ++ + L + WG G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWGD--GD 3182
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
F + G GG G N I +N G+ V Q+ CG + AL
Sbjct: 3183 FGKLGR--GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 3221
Score = 171 (65.3 bits), Expect = 9.0e-24, Sum P(2) = 9.0e-24
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 153 (58.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/237 (24%), Positives = 106/237 (44%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G+V SWG G GRLGHG ++ L + S ++ + G V A G +
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGKQA----GKHVVHIACGSTY 563
Query: 250 SACIDENGRVYIFG-------------DRAVDKMLFQ-EG----------NHARRPSLIS 285
SA I G +Y +G D A+ ++ +G A+ ++
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
G++++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +W
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSW 682
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 683 GKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 142 (55.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGW 330
+G+H +L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 504 DGHHYL--ALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGS 561
Query: 331 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
++AAI+ EG++ TWG G + G+LGHG+ D P +V + +K + V
Sbjct: 562 TYSAAITAEGELYTWG----RGNY--------GRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 390 SCG 392
+CG
Sbjct: 610 ACG 612
Score = 141 (54.7 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 55/220 (25%), Positives = 97/220 (44%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--AAG 246
+++ G G + WG G+LG + + + + T R ++ + G + A A G
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4007
Query: 247 FLHSACIDENGRVYIFGDRAVDK-MLFQEGNHA--RRPSLISGG----------ELYTWG 293
L++ GR+ I G +V L + H ++ ++ SGG E+Y+WG
Sbjct: 4008 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4067
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 352
E+G LG G+ P ++ VD V+ G H+A ++ G + TWG G
Sbjct: 4068 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWG----KGR 4122
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+ G+LGH + D + P +V + + + V+CG
Sbjct: 4123 Y--------GRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4154
Score = 137 (53.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4180 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4237
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4238 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4296
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4297 LVAALQGKKVNRVACGSAHTLA 4318
Score = 108 (43.1 bits), Expect = 6.3e-33, Sum P(2) = 6.3e-33
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S K
Sbjct: 4271 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTSK 4323
Score = 96 (38.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 32/96 (33%), Positives = 44/96 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND Q
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
+ + EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRVTKP-EPAALPGLDTKHIVGIACGPAQSFA 776
Score = 48 (22.0 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCG 329
+L E+++WGSN+ C ++ V PE P ++ + ++CG
Sbjct: 724 ALTEDSEVHSWGSNDQ-CQHFDTLRVT-KPEPAALPGLDTKHIVGIACG 770
Score = 46 (21.3 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 322 PVDQVSCGWKHTAAISEGKILTWGW 346
P D++ WK IS+G + WGW
Sbjct: 3686 PGDELK--WKF---ISDGSVNGWGW 3705
Score = 39 (18.8 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 373 IHPTIVNFGENVKALQVSC 391
IHPT + V LQ C
Sbjct: 1958 IHPTAMMLTSTVNLLQTLC 1976
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 309 (113.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 112/386 (29%), Positives = 173/386 (44%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3970 WGHNHRGQLG-GIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGA 4026
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4027 GGRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4084
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4085 GHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4140
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V A G + C+ ++ V+ +GD K+
Sbjct: 4141 -------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4193
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4194 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4253
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+VQG V ++ G H SE G++ TWG D GQLG G
Sbjct: 4254 RQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWG----------DNDE--GQLGDGTTN 4300
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 4301 AIQRPRLVAALQGKKVNRVACGSAHT 4326
Score = 307 (113.1 bits), Expect = 6.3e-33, Sum P(2) = 6.3e-33
Identities = 90/292 (30%), Positives = 150/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 3048 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3102
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3103 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3161
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3162 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3219
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3220 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3270
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + + G+VY +GD D Q+GN R+P+L+ G E
Sbjct: 3271 VHVAVGALHCLAVTDAGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 3318
Score = 290 (107.1 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2972 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3031
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3032 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3090
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G
Sbjct: 3091 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3141
Query: 264 ----DRAVD------KMLFQE-------GNH-ARRPSLISGGELYTWGSNENGCLGIGSI 305
D K+L G+ A+ +L G +++WG + G LG G
Sbjct: 3142 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3201
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 3202 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 3249
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG+DV P +V K + V+ G H A+ +
Sbjct: 3250 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3285
Score = 289 (106.8 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 111/388 (28%), Positives = 182/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2974 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 3031
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 3032 NGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3091
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3092 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3146
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3147 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3200
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG GS DV + P
Sbjct: 3201 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS-DVHVRKP 3259
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 3260 QVVEGLRGKKIV-HVAVGALHCLAVTDAGQVYAWG---------DNDH---GQQGNGTTT 3306
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 3307 VNRKPTLVQGLEGQKITRVACGSSHSVA 3334
Score = 278 (102.9 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 75/229 (32%), Positives = 118/229 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ Y P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV--------RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 276 (102.2 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 96/342 (28%), Positives = 153/342 (44%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3958 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAVTAD 4016
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4017 GKLYATGYGAGGRLGVG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4074
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G +V AAG HSAC+ G +
Sbjct: 4075 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGTEVVDVAAGGAHSACVTAAGDL 4125
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISG-------------GE-----------LYTWGSN 295
Y +G ++ + +P L+ G+ +++WG
Sbjct: 4126 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDG 4185
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS 354
+ G LG G D P ++ + V +V CG + + A+++ G + TWG G H
Sbjct: 4186 DYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH---- 4240
Query: 355 EDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNH 395
+LGHG+D D++ P V + K + ++ G H
Sbjct: 4241 --------RLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLH 4273
Score = 265 (98.3 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 89/287 (31%), Positives = 131/287 (45%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 461 EKRFLILSRNGRVYTQAYNS--DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 519 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 578 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 636 GKLGRG------G---SDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGD 686
Query: 267 VDKMLFQEGNHARRPSLISG--GE-LYTWGSNENGCLGIGSIDVLHS 310
++ H R P L+ G G+ + + CL + +HS
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHS 733
Score = 245 (91.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 90/321 (28%), Positives = 143/321 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-------SD----TLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-- 285
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 286 ----------G----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
G G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 326 VSCGWKHTAAISE-GKILTWG 345
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 230 (86.0 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 59/164 (35%), Positives = 88/164 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Score = 207 (77.9 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3188 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3247
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3248 LGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--T 3304
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 3305 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3336
Score = 199 (75.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 82/285 (28%), Positives = 122/285 (42%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 3965 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYA 4021
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V +K A +G H + G
Sbjct: 4022 TGYGAGGRLGVGGTESVS---------TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4072
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
VY +G+ K+ + RP +I + G+LYTWG
Sbjct: 4073 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGR 4132
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG + P+ V+ VD V+CG T +++ + W WG
Sbjct: 4133 YGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTV-WSWG------- 4183
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ + ++V CG + AL
Sbjct: 4184 -DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4225
Score = 194 (73.4 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 85/287 (29%), Positives = 127/287 (44%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2964 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3021
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3022 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3075
Query: 256 NGRVYIFGD-----------RAVDKMLFQEGNHARR-----------PSLISGGELYTWG 293
+G+V+ +G+ DK E +R +L S GELYTWG
Sbjct: 3076 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3135
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 352
E G LG G P+ V+ + QV+CG + ++ + L + WG G
Sbjct: 3136 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWGD--GD 3192
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
F + G GG G N I +N G+ V Q+ CG + AL
Sbjct: 3193 FGKLGR--GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 3231
Score = 171 (65.3 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 50/155 (32%), Positives = 76/155 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVA 191
+ K P P+ L G+ TK A G QS A
Sbjct: 747 RVTK--PEPS---ALPGLDTKHIVGIACGPAQSFA 776
Score = 154 (59.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 59/237 (24%), Positives = 106/237 (44%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G+V SWG G GRLGHG ++ L + S ++ + G V A G +
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGKQA----GKHVVHIACGSTY 563
Query: 250 SACIDENGRVYIFG-------------DRAVDKMLFQ-EG----------NHARRPSLIS 285
SA I G +Y +G D A+ ++ +G A+ ++
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
G++++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +W
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSW 682
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 683 GKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 142 (55.0 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGW 330
+G+H +L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 504 DGHHYL--ALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGS 561
Query: 331 KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
++AAI+ EG++ TWG G + G+LGHG+ D P +V + +K + V
Sbjct: 562 TYSAAITAEGELYTWG----RGNY--------GRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 390 SCG 392
+CG
Sbjct: 610 ACG 612
Score = 133 (51.9 bits), Expect = 0.00018, P = 0.00018
Identities = 47/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4190 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4247
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + +E G VY G ND GQLG P
Sbjct: 4248 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4306
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4307 LVAALQGKKVNRVACGSAHTLA 4328
Score = 108 (43.1 bits), Expect = 6.3e-33, Sum P(2) = 6.3e-33
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S K
Sbjct: 4281 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTSK 4333
Score = 47 (21.6 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCG 329
+L E+++WGSN+ C ++ V P + G ++ V ++CG
Sbjct: 724 ALTEDSEVHSWGSNDQ-CQHFDTLRVTKPEPSALPGLDTKHIVG-IACG 770
Score = 46 (21.3 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 322 PVDQVSCGWKHTAAISEGKILTWGW 346
P D++ WK IS+G + WGW
Sbjct: 3696 PGDELK--WKF---ISDGSVNGWGW 3715
Score = 39 (18.8 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 373 IHPTIVNFGENVKALQVSC 391
IHPT + V LQ C
Sbjct: 1963 IHPTAMMLTSTVNLLQTLC 1981
Score = 37 (18.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 172 ECLSGIFTKQAALGFEQSVAVT 193
ECLS + +Q AL QS T
Sbjct: 115 ECLSVLVKEQQALAI-QSATTT 135
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 259 (96.2 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 76/229 (33%), Positives = 113/229 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P S F K +K++ GG H++ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+ G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLGL----GHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGHGQE 214
K + +P +ECL AA G ++A T G WG G SGR L GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTDTGSTFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ FL + P + LE V A AG HSA + + G +Y++G
Sbjct: 194 LPL--FLTAKE---PSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWG 237
Score = 219 (82.2 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 68/224 (30%), Positives = 104/224 (46%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
N D G+LGLG E R +C ++ +ACG T+ LTE G V + G N FGQLG
Sbjct: 76 NKD-GQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLG 134
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN--SNGQ-LGLGKKA 161
+ + P I L+++VV ++ G H+ A T G + WG S+G+ L G+
Sbjct: 135 VPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQWGTGLASSGRRLCPGQNL 194
Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P++V L A G + S ++T G++ WG R HGQ +S+
Sbjct: 195 PLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWG-----RNKHGQLASLAT 249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
FL ++ E KV +G+ H E G+V+ +G
Sbjct: 250 FLPLPQRVEAHYFQD-E--KVTAVWSGWTHLVAKTETGKVFTWG 290
Score = 206 (77.6 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 67/200 (33%), Positives = 99/200 (49%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFE--KHSLKALACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ + VV A E + + +A G H L T+TG + TGL
Sbjct: 126 GSNAFGQLGVP--HGPRKCVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQWGTGLAS 183
Query: 100 FGQ-LGISENIGYSL---EPLRISGLKKEVVQIST-GYHHSSAITVDGELYMWGKNSNGQ 154
G+ L +N+ L EP R++GL+ V + G HS+++T GELY+WG+N +GQ
Sbjct: 184 SGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQ 243
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLG-- 210
L A +P+P +VE K A+ G+ VA T GKV +WG G+LG
Sbjct: 244 LA---SLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRT 300
Query: 211 --------HGQESSILGFLR 222
HG++ S L F R
Sbjct: 301 LGSPEAQKHGEQDSSLAFQR 320
Score = 166 (63.5 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 54/176 (30%), Positives = 87/176 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S K + ++ G HS +T G L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLL-PQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLGH-TEEVLRF-TICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G HG ++ P+ I+ L KV AAG H+ + G + +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLRE-KVVCVAAGLRHALATTDTGSTFQWG 178
Score = 146 (56.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 43/136 (31%), Positives = 60/136 (44%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A++ L+ WG NS GQLGLG K ++P C SG K G SV VT
Sbjct: 8 SEAVSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCI-KSVTGGGGHSVVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGGLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLLGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKM 270
E G+V G A ++
Sbjct: 118 EKGQVLSCGSNAFGQL 133
Score = 119 (46.9 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 28/66 (42%), Positives = 35/66 (53%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-G 339
SL GELY WG N++G L L P+RV+ F + V V GW H A +E G
Sbjct: 226 SLTDTGELYVWGRNKHGQLA-SLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETG 284
Query: 340 KILTWG 345
K+ TWG
Sbjct: 285 KVFTWG 290
Score = 55 (24.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 287 GELYTWGSN--ENG---CLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
G + WG+ +G C G + P RV G S + V V+ G H+A++++
Sbjct: 172 GSTFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVA-GSDHSASLTDT 230
Query: 339 GKILTWGWGGSHG 351
G++ WG HG
Sbjct: 231 GELYVWG-RNKHG 242
Score = 44 (20.5 bits), Expect = 5.0e-25, Sum P(2) = 5.0e-25
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 287 GELYTWGSNENGCLG--IGS 304
G+++TWG + G LG +GS
Sbjct: 284 GKVFTWGRADYGQLGRTLGS 303
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 307 (113.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 110/385 (28%), Positives = 174/385 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG +E V +L+ + GG TLF +T G +YATG
Sbjct: 3955 WGHNHRGQLG--GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4012
Query: 101 GQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI +E++ LE ++ ++K V +++G H A++ +GELY WG+ +G+LG
Sbjct: 4013 GRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGELYSWGEAEDGKLG 4070
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G+ A G S +T G++ +WG G GRLGHG
Sbjct: 4071 HGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGD--- 4125
Query: 217 ILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V +A +G + C+ ++ V+ +GD K+
Sbjct: 4126 ------SEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4179
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4180 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4239
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TWG D GQLG G
Sbjct: 4240 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG----------DNDE--GQLGDGTTNA 4286
Query: 372 YIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 4287 IQRPRLVAALQGKKINRVACGSAHT 4311
Score = 305 (112.4 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 89/292 (30%), Positives = 151/292 (51%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R ++A++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +P
Sbjct: 3033 RQISALSNYVVK---KVAVHSG-GRHAMALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3087
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ +T +G +Y+ GL ++G+LG +N L P + L
Sbjct: 3088 LIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT-QLRPKLVKVLLG 3146
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
VVQ++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3147 HRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3204
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3205 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV----RK-----PQMVEGLRGKKI 3255
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISGGE 288
A G LH + E G+V+ +GD D Q+GN R+P+L+ G E
Sbjct: 3256 VHVAVGALHCLAVTETGQVFAWGDN--DHG--QQGNGTTTVNRKPTLVQGLE 3303
Score = 303 (111.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 114/388 (29%), Positives = 181/388 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2959 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTAEGKVYACGEAT 3016
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +IS L VV+ + +G H+ A+TVDG+++ WG+ +G+LG
Sbjct: 3017 NGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLG 3076
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ SWG G GRLGHG
Sbjct: 3077 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGD--- 3131
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF-- 272
+T++ P+L+K L G +V A G + + + G V+ +GD K+
Sbjct: 3132 ------NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGG 3185
Query: 273 QEG-NHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDV-LHSP 311
EG N + ++G G ++TWG + LG G+ DV + P
Sbjct: 3186 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT-DVHVRKP 3244
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G + V V+ G H A++E G++ WG ++ H GQ G+G
Sbjct: 3245 QMVEGLRGKKIV-HVAVGALHCLAVTETGQVFAWG---------DNDH---GQQGNGTTT 3291
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V E K +V+CG +H+ A
Sbjct: 3292 VNRKPTLVQGLEGQKITRVACGSSHSVA 3319
Score = 292 (107.8 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 96/336 (28%), Positives = 155/336 (46%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+T +G++Y G+ +
Sbjct: 2957 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEAT 3016
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3017 NGRLGLGLSSG-TIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3075
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3076 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3126
Query: 270 MLFQEGNHARRPSLIS---G---------------------GELYTWGSNENGCLGIGSI 305
+ + RP L+ G G +++WG + G LG G
Sbjct: 3127 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGS 3186
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + +LG
Sbjct: 3187 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYF--------RLG 3234
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG DV P +V K + V+ G H A+ E
Sbjct: 3235 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTE 3270
Score = 278 (102.9 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 96/342 (28%), Positives = 155/342 (45%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3943 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPTEALATLRPVQLIGGEQTLFAVTAD 4001
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F ++ A+ G + +A++ G++
Sbjct: 4002 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELY 4059
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L GV+V AAG HSACI +G +
Sbjct: 4060 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGVEVVDIAAGGAHSACITASGEL 4110
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISG-------------GE-----------LYTWGSN 295
Y +G ++ + +P L+ G+ +++WG
Sbjct: 4111 YTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDG 4170
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS 354
+ G LG G D P ++ + V +V CG + + A+++ G + TWG G H
Sbjct: 4171 DYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH---- 4225
Query: 355 EDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNH 395
+LGHG+D D++ P V + K + ++ G H
Sbjct: 4226 --------RLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLH 4258
Score = 259 (96.2 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 91/305 (29%), Positives = 139/305 (45%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ A + LA G H L L+ G V++ G D G+LG + Y EP IS
Sbjct: 474 PMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGHGDTT-YLEEPTMIS 532
Query: 120 ---G--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
G + K+VV I+ G +S+AIT DGEL+ WG+ + G+LG G + P+ V L
Sbjct: 533 VFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPM--LVTAL 590
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G G S TP+L+
Sbjct: 591 KGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG------G---SDGCKTPKLV 641
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---GGEL 289
++L+ + + G S + ++G+VY +G ++ H R P L+ G +
Sbjct: 642 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRV 701
Query: 290 YTWGSNENGCLGI---GSIDVLHSPERVQG---PFSESPVDQVSCGW--KHTAAISEGKI 341
CL + G + S +++Q FS + G KH IS G
Sbjct: 702 VDIAVGSTHCLALTEEGEVHSWGSNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCGPG 761
Query: 342 LTWGW 346
++ W
Sbjct: 762 QSFSW 766
Score = 251 (93.4 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 71/234 (30%), Positives = 111/234 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA----LACGGAHTLFLTETGCVYATGLN 98
WG GD GRLG G P + S F + +ACG ++ +T G ++ G
Sbjct: 509 WGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRG 568
Query: 99 DFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
++G+LG SE+ + + GLK V +G + A+T +G+++ WG G+LG
Sbjct: 569 NYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG 628
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 629 RG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEH 686
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ Y P+L+ L+G +V A G H + E G V+ +G DK+
Sbjct: 687 V--------RY-PKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSN--DKL 729
Score = 248 (92.4 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 89/327 (27%), Positives = 146/327 (44%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G LG + P+ C A + + C L LT TG VY ++ ++
Sbjct: 418 WGLLGWKPYANVNGPIQCKALSNLGVTQIVCSEKGFLILTITGAVYT---QNYKSTTLAP 474
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ ++L +I L G H+ A++V+GE++ WG G+LG G +
Sbjct: 475 MLVHALTSRKIMKLAAH----PDGQHYL-ALSVNGEVFSWGCGDGGRLGHGDTT--YLEE 527
Query: 168 PTKVECLSGI-FTKQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PT + SG KQ A G S A+T G++ +WG G GRLGHG S
Sbjct: 528 PTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGS---------S 578
Query: 224 TSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P
Sbjct: 579 EDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 638
Query: 282 SLIS------------G----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
L+ G G++YTWG +N LG G+ + + P+ +
Sbjct: 639 KLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQG 698
Query: 320 ESPVDQVSCGWKHTAAISE-GKILTWG 345
+ VD ++ G H A++E G++ +WG
Sbjct: 699 KRVVD-IAVGSTHCLALTEEGEVHSWG 724
Score = 241 (89.9 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 60/172 (34%), Positives = 95/172 (55%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ +A + + +ACG A TL +TE G V++ G D+
Sbjct: 565 WGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 624
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P + L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 625 GKLGRGGSDGCKT-PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT 683
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ + P ++ L G A+G +A+T G+V SWG+ + +L H
Sbjct: 684 D--EHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGS--NDKLQH 731
Score = 206 (77.6 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 50/152 (32%), Positives = 78/152 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3173 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3232
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + +P + GL+ K++V ++ G H A+T G+++ WG N +GQ G G
Sbjct: 3233 LGHGTDV-HVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNG--T 3289
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V PT V+ L G + A G SVA T
Sbjct: 3290 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3321
Score = 204 (76.9 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 82/285 (28%), Positives = 125/285 (43%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLS 200
G +Y WG N GQLG G + AKV +PT E L+ + Q +G EQ++ AVT GK+ +
Sbjct: 3950 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPTEALATLRPVQL-IGGEQTLFAVTADGKLYA 4006
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGR 258
G G GRLG G S+ TP L++ ++ V + K+A +G H + G
Sbjct: 4007 TGYGAGGRLGIGGTESVS---------TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 4057
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNE 296
+Y +G+ K+ + RP +I + GELYTWG
Sbjct: 4058 LYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGR 4117
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFS 354
G LG G + P+ V+ +D V+CG T +++ ++ W WG
Sbjct: 4118 YGRLGHGDSEDQLKPKLVEALQGHRVID-VACGSGDAQTLCLTDDDMV-WSWG------- 4168
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG G P ++ + ++V CG + AL
Sbjct: 4169 -DGDY--GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4210
Score = 192 (72.6 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 83/281 (29%), Positives = 126/281 (44%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2949 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 3006
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL---EGVKVKIAAA--GFLHS 250
GKV + G +GRLG G S + R S + ++K++ G + +A G + S
Sbjct: 3007 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3066
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARR-----------PSLISGGELYTWGSNENGC 299
++G++ F DK E +R ++ S GELY+WG E G
Sbjct: 3067 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3126
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 358
LG G P+ V+ V QV+CG + ++ + + + WG G F + G
Sbjct: 3127 LGHGDNTTQLRPKLVKVLLGHRVV-QVACGSRDAQTLALTDEGMVFSWGD--GDFGKLGR 3183
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GG G N I +N G+ V Q+ CG + AL
Sbjct: 3184 --GGSEGC-NIPQNIER--LN-GQGV--CQIECGAQFSLAL 3216
Score = 173 (66.0 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 44/131 (33%), Positives = 65/131 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 619 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 678
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
LG E++ Y P + L+ K VV I+ G H A+T +GE++ WG N Q L
Sbjct: 679 LGHGTDEHVRY---PKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSNDKLQHFDTL 735
Query: 156 GLGKKAAKVIP 166
KK K +P
Sbjct: 736 FSNKKQPKALP 746
Score = 162 (62.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 59/237 (24%), Positives = 107/237 (45%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A++ G+V SWG G GRLGHG +++ L S ++ R + G +V A G +
Sbjct: 498 LALSVNGEVFSWGCGDGGRLGHG-DTTYLEEPTMISVFSGRPV----GKQVVHIACGSTY 552
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--------------SG--------- 286
SA I +G ++ +G ++ P L+ SG
Sbjct: 553 SAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTE 612
Query: 287 -GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
G++++WG + G LG G D +P+ V+ + + +V CG + + A++ +G++ TW
Sbjct: 613 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTW 671
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G + +LGHG D +P +++ + + + ++ G H AL E
Sbjct: 672 GKGDNQ------------RLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTE 716
Score = 145 (56.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 42/140 (30%), Positives = 69/140 (49%)
Query: 259 VYIFGDRAVDKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
V+ R + K+ +G H S+ GE+++WG + G LG G L P +
Sbjct: 477 VHALTSRKIMKLAAHPDGQHYLALSV--NGEVFSWGCGDGGRLGHGDTTYLEEPTMIS-V 533
Query: 318 FSESPVDQ----VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
FS PV + ++CG ++AAI+ +G++ TWG G + G+LGHG+ D
Sbjct: 534 FSGRPVGKQVVHIACGSTYSAAITADGELHTWG----RGNY--------GRLGHGSSEDQ 581
Query: 373 IHPTIVNFGENVKALQVSCG 392
P +V + +K + V+CG
Sbjct: 582 TTPMLVTALKGLKVIDVACG 601
Score = 136 (52.9 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 47/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4175 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4232
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4233 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4291
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K++ +++ G H+ A
Sbjct: 4292 LVAALQGKKINRVACGSAHTLA 4313
Score = 107 (42.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
GE+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S K
Sbjct: 4266 GEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTSK 4318
Score = 47 (21.6 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 322 PVDQVSCGWKHTAAISEGKILTWGW 346
P D++ WK T S+G + WGW
Sbjct: 3681 PGDELK--WKFT---SDGSVNGWGW 3700
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 351 (128.6 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 105/347 (30%), Positives = 168/347 (48%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TS P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 --KQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P+L+ G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSH--GTFSEDGHSS 360
S V QV+CG +HT+A S G+I ++G GG+ GT S S
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337
Score = 322 (118.4 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 95/297 (31%), Positives = 137/297 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 282 -------SLI---------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
S++ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 228 (85.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 95/334 (28%), Positives = 138/334 (41%)
Query: 96 GLNDFGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
G +GQLG I E I LEP R + K+V + G H+ + DG +Y G N
Sbjct: 5 GNASYGQLGLGGIDEEI--VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG- 210
GQLG K K P +V L A G ++A+ G+V +WG G+LG
Sbjct: 63 LGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G E I PR IK L +++ A G+ HS + + V+ +G ++
Sbjct: 119 QGSEECIR---------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 271 -LFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDV 307
L + P LI G ++ WG N+ G LG+ +
Sbjct: 170 GLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ P ++ S+ V + CG HTAA++ EG + T+G GG GQLGH
Sbjct: 230 RYVPNLLKSLRSQKIV-YICCGEDHTAALTKEGGVFTFGAGGY------------GQLGH 276
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ I+P V QV+CG HT A +
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 71/280 (25%), Positives = 115/280 (41%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P + + + G +V V G V + G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + A G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKMLFQEGNHA--RRP----------------------SLISGGELYTWGSNENGCLGI 302
D L +G+ R P +L E++ WG N+ G LG+
Sbjct: 113 -DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 303 GSIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 359
G ID SP+ ++ P QV+ G H+ ++ G I +GWG +
Sbjct: 172 G-IDCQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAI--FGWG----------RN 217
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG ++ D P ++ + K + + CG +HT AL
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 42 (19.8 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 351 GTFSEDGHSSGGQLGHGNDVDY 372
GTFS G +G L ND Y
Sbjct: 428 GTFSSSGCLNGSFLAISNDDHY 449
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 343 (125.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 102/347 (29%), Positives = 166/347 (47%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P+L+ G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSH--GTFSEDGHSS 360
S V Q++CG +HT+A S G+I ++G GG+ GT S S
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337
Score = 315 (115.9 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 94/297 (31%), Positives = 137/297 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 282 -------SLI---------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
S++ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 92/334 (27%), Positives = 138/334 (41%)
Query: 96 GLNDFGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
G FGQLG I E I LEP + + K+V + G H+ + DG +Y G N
Sbjct: 5 GNASFGQLGLGGIDEEI--VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG K K P +V L + G ++A+ G+V +WG G+LG
Sbjct: 63 LGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 212 -GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G E I PR IK L +++ A G+ HS + + V+ +G ++
Sbjct: 119 LGSEECIR---------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 271 -LFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDV 307
L + P LI G ++ WG N+ G LG+ +
Sbjct: 170 GLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ P ++ ++ V + CG HTAA++ EG + T+G GG GQLGH
Sbjct: 230 RYVPNLLKSLRTQKIV-YICCGEDHTAALTKEGGVFTFGAGGY------------GQLGH 276
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ I+P V Q++CG HT A +
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 159 (61.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 70/279 (25%), Positives = 113/279 (40%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-D- 264
G+LGH + S P + L+ + + G H+ +++ G+VY +G D
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 265 ----------------RAV----DKMLFQEG-NHARRPSLISGGELYTWGSNENGCLGIG 303
R + D + Q + +L E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 304 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
ID SP+ ++ P QV+ G H+ ++ G I +GWG +
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAI--FGWG----------RNK 218
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG ++ D P ++ K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 42 (19.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 351 GTFSEDGHSSGGQLGHGNDVDY 372
GTFS G +G L ND Y
Sbjct: 428 GTFSSSGCLNGSFLAVSNDDHY 449
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 342 (125.4 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 100/334 (29%), Positives = 158/334 (47%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + S P +IK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 YKKQNS---PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P+L+ G ++T+G+ G LG S +P +V
Sbjct: 232 VPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 349
S V Q++CG +HT A S G+I ++G GG+
Sbjct: 291 LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324
Score = 307 (113.1 bits), Expect = 8.6e-28, Sum P(2) = 8.6e-28
Identities = 96/303 (31%), Positives = 140/303 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
Y P L+K L KV G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 282 -------SLI---------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 316
SL+ S G +Y++G NG LG G+ SP V+G
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWL 346
Query: 317 PFS 319
P+S
Sbjct: 347 PYS 349
Score = 242 (90.2 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 61/178 (34%), Positives = 95/178 (53%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISE-NIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+++ N Y P + L+ ++VV I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 279 TSHEINP--RKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
Score = 217 (81.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 93/334 (27%), Positives = 138/334 (41%)
Query: 96 GLNDFGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
G FGQLG I E I LEP + L K + + G H+ + DG +Y G N
Sbjct: 5 GNASFGQLGLGGIDEEI--VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG- 210
GQLG +KA K P V L + G ++A+ G+V +WG G+LG
Sbjct: 63 LGQLG-HEKARKR---PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G E I PR IK L +++ A G+ HS + + V+ +G ++
Sbjct: 119 PGTEECIR---------VPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQL 169
Query: 271 -LFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDV 307
L E P +I G ++ WG N+ G LG+ +
Sbjct: 170 GLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDND 229
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ P ++ ++ V + CG HTAA++ EG + T+G GG GQLGH
Sbjct: 230 RYVPTLLKSLRTQKVV-HICCGEDHTAALTKEGGVFTFGAGGY------------GQLGH 276
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ I+P V Q++CG HT A +
Sbjct: 277 NSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Score = 177 (67.4 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 73/279 (26%), Positives = 115/279 (41%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH E + R E+ + L+ + + G H+ +++ G+VY +G A
Sbjct: 64 GQLGH--EKA-----RKRPEH----VGALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LA 111
Query: 267 VDKMLFQEGNHA--RRP----------------------SLISGGELYTWGSNENGCLGI 302
D L G R P +L G E+++WG N+ G LG+
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171
Query: 303 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
G +SP ++ P Q++ G H+ ++ G I +GWG +
Sbjct: 172 GYEYKKQNSPHVIKSLLG-IPFAQIAAGGAHSFVLTLSGAI--FGWG----------RNK 218
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG +D D PT++ K + + CG +HT AL
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257
Score = 43 (20.2 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQV 389
GTFS G +G L ND Y T V F G ++ A ++
Sbjct: 428 GTFSSAGCLNGSFLALSNDDHY--KTSVRFSGVDMNAARL 465
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 343 (125.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 102/347 (29%), Positives = 166/347 (47%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P+L+ G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSH--GTFSEDGHSS 360
S V Q++CG +HT+A S G+I ++G GG+ GT S S
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337
Score = 315 (115.9 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 94/297 (31%), Positives = 137/297 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 282 -------SLI---------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
S++ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 92/334 (27%), Positives = 138/334 (41%)
Query: 96 GLNDFGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
G FGQLG I E I LEP + + K+V + G H+ + DG +Y G N
Sbjct: 5 GNASFGQLGLGGIDEEI--VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG K K P +V L + G ++A+ G+V +WG G+LG
Sbjct: 63 LGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 212 -GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G E I PR IK L +++ A G+ HS + + V+ +G ++
Sbjct: 119 LGSEECIR---------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 271 -LFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDV 307
L + P LI G ++ WG N+ G LG+ +
Sbjct: 170 GLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ P ++ ++ V + CG HTAA++ EG + T+G GG GQLGH
Sbjct: 230 RYVPNLLKSLRTQKIV-YICCGEDHTAALTKEGGVFTFGAGGY------------GQLGH 276
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ I+P V Q++CG HT A +
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 159 (61.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 70/279 (25%), Positives = 113/279 (40%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-D- 264
G+LGH + S P + L+ + + G H+ +++ G+VY +G D
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 265 ----------------RAV----DKMLFQEG-NHARRPSLISGGELYTWGSNENGCLGIG 303
R + D + Q + +L E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 304 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
ID SP+ ++ P QV+ G H+ ++ G I +GWG +
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAI--FGWG----------RNK 218
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG ++ D P ++ K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 42 (19.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 351 GTFSEDGHSSGGQLGHGNDVDY 372
GTFS G +G L ND Y
Sbjct: 428 GTFSSSGCLNGSFLAVSNDDHY 449
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 342 (125.4 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 102/347 (29%), Positives = 167/347 (48%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TS P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 --KQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P+L+ G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSH--GTFSEDGHSS 360
S V +++CG +HT+A S G+I ++G GG+ GT S S
Sbjct: 291 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337
Score = 317 (116.6 bits), Expect = 9.8e-29, Sum P(2) = 9.8e-29
Identities = 94/297 (31%), Positives = 137/297 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 282 -------SLI---------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
S++ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 218 (81.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 91/334 (27%), Positives = 137/334 (41%)
Query: 96 GLNDFGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
G FGQLG I E I LEP + + K V + G H+ + DG +Y G N
Sbjct: 5 GNASFGQLGLGGIDEEI--VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG K K P +V L + G ++A+ G+V +WG G+LG
Sbjct: 63 LGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 212 -GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G E I PR IK L +++ A G+ HS + + V+ +G ++
Sbjct: 119 VGSEECIR---------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 271 -LFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDV 307
L + P L+ G ++ WG N+ G LG+ +
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ P ++ S+ V + CG HTAA++ EG + T+G GG GQLGH
Sbjct: 230 RYVPNLLKSLRSQKIV-YICCGEDHTAALTKEGGVFTFGAGGY------------GQLGH 276
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ I+P V +++CG HT A +
Sbjct: 277 NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 68/278 (24%), Positives = 113/278 (40%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-D- 264
G+LGH + S P + L+ + + G H+ +++ G+VY +G D
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 265 ----------------RAV----DKMLFQEG-NHARRPSLISGGELYTWGSNENGCLGIG 303
R + D + Q + +L E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 304 S-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 361
+ SP+ ++ P QV+ G H+ ++ G I +GWG +
Sbjct: 173 TDCKKQTSPQLLKSLLG-IPFMQVAAGGAHSFVLTLSGAI--FGWG----------RNKF 219
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG ++ D P ++ + K + + CG +HT AL
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 42 (19.8 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 351 GTFSEDGHSSGGQLGHGNDVDY 372
GTFS G +G L ND Y
Sbjct: 428 GTFSSSGCLNGSFLAVSNDDHY 449
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 342 (125.4 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 102/347 (29%), Positives = 166/347 (47%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P+L+ G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSH--GTFSEDGHSS 360
S V Q++CG +HT+A S G+I ++G GG+ GT S S
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337
Score = 314 (115.6 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 94/297 (31%), Positives = 137/297 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 282 -------SLI---------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
S++ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 92/334 (27%), Positives = 138/334 (41%)
Query: 96 GLNDFGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
G FGQLG I E I LEP + + K+V + G H+ + DG +Y G N
Sbjct: 5 GNASFGQLGLGGIDEEI--VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG K K P +V L + G ++A+ G+V +WG G+LG
Sbjct: 63 LGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 212 -GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G E I PR IK L +++ A G+ HS + + V+ +G ++
Sbjct: 119 LGSEECIR---------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 271 -LFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDV 307
L + P LI G ++ WG N+ G LG+ +
Sbjct: 170 GLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ P ++ ++ V + CG HTAA++ EG + T+G GG GQLGH
Sbjct: 230 RYVPNLLKSLRTQKIV-YICCGEDHTAALTKEGGVFTFGAGGY------------GQLGH 276
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ I+P V Q++CG HT A +
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 158 (60.7 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 69/279 (24%), Positives = 113/279 (40%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-D- 264
G+LGH + S P + L+ + + G H+ +++ G+VY +G D
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 265 ----------------RAV----DKMLFQEG-NHARRPSLISGGELYTWGSNENGCLGIG 303
R + D + Q + +L E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 304 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
ID SP+ ++ P Q++ G H+ ++ G I +GWG +
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQIAAGGAHSFVLTLSGAI--FGWG----------RNK 218
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG ++ D P ++ K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 42 (19.8 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 351 GTFSEDGHSSGGQLGHGNDVDY 372
GTFS G +G L ND Y
Sbjct: 428 GTFSSSGCLNGSFLAVSNDDHY 449
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 359 (131.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 111/338 (32%), Positives = 169/338 (50%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
IC + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 4033 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL- 199
DG+L+ +G G+LGLG + K +P +V L G Q A G ++AV+ G ++
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ I L G+ +K A G S + ++G V
Sbjct: 4210 AFGDGDYGKLGLGN---------STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHV 4260
Query: 260 YIFG-DRAVDKMLFQEGNHARR---P------------------SLISGGELYTWGSNEN 297
Y FG DR + + NH R P +L S G++Y WGSN
Sbjct: 4261 YTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSE 4320
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G LG+G + + P V G ++ V Q+S G H+AA
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKN-VRQISAGRCHSAA 4357
Score = 323 (118.8 bits), Expect = 6.7e-28, Sum P(2) = 6.7e-28
Identities = 108/335 (32%), Positives = 163/335 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLIS------------G----------GELYTWGSNENGCLGIG-SIDVLHSPER 313
A RP LI G E+Y WG+N G G G S + P++
Sbjct: 653 -ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 314 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
V G + Q+S G H TA + +++ W
Sbjct: 712 VSG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 266 (98.7 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 101/385 (26%), Positives = 165/385 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
S S P L+K++ V + G H+ + ++GR V+ FG K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 599
Query: 276 NHARRPSLI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPER 313
N +P +I S G++Y WG CLG GS + +
Sbjct: 600 NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPK 657
Query: 314 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
+ + + + VS G H A+S + ++ WG ++S GQ G GN
Sbjct: 658 LIEELAATRIVDVSIGDSHCLALSHDNEVYAWG------------NNSMGQCGQGNSTGP 705
Query: 373 I-HPTIVNFGENVKALQVSCGFNHT 396
I P V+ + + Q+S G +H+
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 251 (93.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 105/387 (27%), Positives = 164/387 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 4117 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225
Query: 277 HARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
P +L G +YT+G + L G + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ ++ V+ G +HT A+ S G + WG +S GQLG G+
Sbjct: 4286 P-VLAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4332
Query: 374 HPTIVNF--GENVKALQVSCGFNHTGA 398
PT+V G+NV+ Q+S G H+ A
Sbjct: 4333 EPTLVTGLQGKNVR--QISAGRCHSAA 4357
Score = 222 (83.2 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 84/297 (28%), Positives = 136/297 (45%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDGS 423
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 484 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLI---------SGGELYT----------W--GSNENGCL 300
+G+ ++ + N P+L+ S G +T W G +NG L
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 356
G G + ++ P+ ++ + +V G + + A+ S G++ WG G G S +
Sbjct: 595 GHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Score = 208 (78.3 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 55/163 (33%), Positives = 78/163 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 197 (74.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 78/304 (25%), Positives = 127/304 (41%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 4085
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------------- 284
+ G HS + E+G V+ +GD K+ + RRP I
Sbjct: 4086 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSC 4141
Query: 285 ---------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
S G+L+T+G+ + G LG+G+ PERV + QV+CG HT A
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLA 4200
Query: 336 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+S + W +G DG G+LG GN P ++ + +V+CG
Sbjct: 4201 VSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQF 4250
Query: 396 TGAL 399
+ AL
Sbjct: 4251 SVAL 4254
Score = 178 (67.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 86/327 (26%), Positives = 139/327 (42%)
Query: 92 VYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
VY G GQL N+ + P + Q+ G + + I +G + G+
Sbjct: 3999 VYLWGAGRHGQLAEAGRNV---MVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLACGEG 4054
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSG 207
S G+LG G + + + T + L G Q + G + S+A+T G+V SWG G G
Sbjct: 4055 SYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG S + PR I+ L+G +V + GF HSA + +G+++ FG+
Sbjct: 4113 KLGHGN---------SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDY 4163
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
++ ++ + P ++ E Y G + C G+ + + + F + ++
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIG--QVAC-GLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Query: 328 CGWKHTAAISEGKI-LTWGWGGSH---GT-FS----EDGHS-SGGQ-----LGHGNDVDY 372
G TA S KI + G G GT FS +DGH + GQ L G ++
Sbjct: 4221 LG-NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P + V V+ G HT AL
Sbjct: 4280 NRPQQIPVLAGVIIEDVAVGAEHTLAL 4306
Score = 160 (61.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 74/276 (26%), Positives = 118/276 (42%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y+WG NS+ QL G + K++ P S T +A G + ++ G V + G
Sbjct: 373 EVYVWGSNSSHQLVEGTQE-KILQ-PKLAPSFSDAQTIEA--GQYCTFVISTDGSVRACG 428
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL------EGVKVKIAAAGFLHSACIDEN 256
G GRLG G ++ + T E R IK++ +G + G + S +
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFE-PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 257 GRVYIFGDRAVDKM--LFQ---EGN--------HARRPSLISGGELYTWGSNENGCLGIG 303
G++ G+ + K L Q +G + ++ GELYTWG + G LG G
Sbjct: 488 GKLG-HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ + P V+ S V +VSCG HT A+S+ W +GG G+
Sbjct: 547 DSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFGGG----------DNGK 593
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LGHG+ P ++ + + +V G + AL
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 44 (20.5 bits), Expect = 6.7e-28, Sum P(2) = 6.7e-28
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 322 PVDQVSCGWKHTAA--ISEGKILTWGWGGSHGTFSEDGHSSG 361
P+ +VS + + G+ILT G GG + G +SG
Sbjct: 2029 PIQEVSFDPEKAQCCLVENGQILTHGSGGKGYGLASTGVTSG 2070
Score = 39 (18.8 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
G++L+ G+GG G +G S+ G ++ ++KE G
Sbjct: 2048 GQILTHGSGGKG---YGLAST--GVTSGCYQWKFYIVKENRG 2084
Score = 38 (18.4 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 202 GAGGSGRLGHGQE 214
G G SGRL H Q+
Sbjct: 1696 GKGESGRLHHYQD 1708
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 122/384 (31%), Positives = 178/384 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + S S+ LACGGAH + LT G V+ G GQ
Sbjct: 20 WGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQ 79
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +L P +S V+ Q + G+ HS ++ G ++ G S GQLG G
Sbjct: 80 LGHGDILNITL-PKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTL 138
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ + P KV + K A G S+ + G +V +G+G G+LG +
Sbjct: 139 S--LSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD------- 189
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFG-------DRAVDKML-- 271
R S P ++ L+ V+V +I+A G HSA I +G+ + +G D + L
Sbjct: 190 RIKSVNLPCVVSGLKDVEVVRISANGD-HSAAISADGQFFSWGRGFCGGPDVHAPQSLPS 248
Query: 272 ---FQE---G-NHARRPSLISGGELYTWGSN-----ENGCLGIGSIDVLHSPERVQGPFS 319
F+E G NHA L GE++ GS E L I S + L E+V F
Sbjct: 249 PLSFREVAVGWNHALL--LTVDGEVFKLGSTLNKQPEKQQLQIDSSEALF--EKVPD-FD 303
Query: 320 ESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
V Q++ G +H+AA++E G++ TWGWG HG QLG GN D P +V
Sbjct: 304 GVKVMQIAAGAEHSAAVTENGEVKTWGWG-EHG-----------QLGLGNTNDQTSPELV 351
Query: 379 NFGE---NVKALQVSCGFNHTGAL 399
+ G K ++V CG T A+
Sbjct: 352 SLGSIDLRTKEIKVYCGSGFTYAV 375
Score = 261 (96.9 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 82/316 (25%), Positives = 144/316 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + + P + S F+ + A G +H+ F++++GC++ G FGQ
Sbjct: 72 WGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQ 131
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + S P ++S + V+ ++ G HS + ++ +G GQLG
Sbjct: 132 LGHGDTLSLST-PAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDR 190
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQES--SIL 218
K + +P V L + + + + S A++ G+ SWG G G H +S S L
Sbjct: 191 IKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPL 250
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-DKM------- 270
F + L+ ++G K+ + L+ E ++ I A+ +K+
Sbjct: 251 SFREVAVGWNHALLLTVDGEVFKLGST--LNKQ--PEKQQLQIDSSEALFEKVPDFDGVK 306
Query: 271 LFQEGNHARRPSLIS-GGELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVD-QVS 327
+ Q A + ++ GE+ TWG E+G LG+G+ + SPE V G + +V
Sbjct: 307 VMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVY 366
Query: 328 CGWKHTAAISEGKILT 343
CG T A+ + L+
Sbjct: 367 CGSGFTYAVKRKQELS 382
Score = 196 (74.1 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 83/337 (24%), Positives = 141/337 (41%)
Query: 92 VYATGLNDFGQLGISENIGYSLEP--LRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
V++ G GQLG ++ + L P L ++ L + ++ G H A+T G+++ WG+
Sbjct: 17 VWSWGAGTDGQLGTTK-LQDELLPQLLSLTSLPS-ISMLACGGAHVIALTSGGKVFTWGR 74
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
S+GQLG G I +P V QAA G+ S V+ G + + G G G+L
Sbjct: 75 GSSGQLGHGDILN--ITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQL 132
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S+ TP + VK+ A G HS + +V FG +
Sbjct: 133 GHGDTLSLS---------TPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQ 183
Query: 270 MLFQEGN--HARRPSLISG----------------------GELYTWGSNENGCLGIGSI 305
+ F P ++SG G+ ++WG C G
Sbjct: 184 LGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWG--RGFC---GGP 238
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 364
DV H+P+ + P S +V+ GW H ++ +G++ G T ++ Q+
Sbjct: 239 DV-HAPQSLPSPLS---FREVAVGWNHALLLTVDGEVFKLG-----STLNKQPEKQQLQI 289
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ + + + +F + VK +Q++ G H+ A+ E
Sbjct: 290 ---DSSEALFEKVPDF-DGVKVMQIAAGAEHSAAVTE 322
Score = 190 (71.9 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 66/230 (28%), Positives = 109/230 (47%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG ++GQLG K +++P + L I A G +A+T GGKV +WG
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSI--SMLACGGAHVIALTSGGKVFTWG 73
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G SG+LGHG L T P+L+ + + AAAG+ HS + ++G ++
Sbjct: 74 RGSSGQLGHGD------ILNIT---LPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTC 124
Query: 263 GDRAV------DKMLFQ---EGNH-----------ARRPSLI--SGGELYTWGSNENGCL 300
G+ + D + + +H R SL+ +G ++ +GS + G L
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184
Query: 301 GIGS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 347
G S I ++ P V G + V ++S H+AAIS +G+ +WG G
Sbjct: 185 GFSSDRIKSVNLPCVVSG-LKDVEVVRISANGDHSAAISADGQFFSWGRG 233
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 348 (127.6 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 109/338 (32%), Positives = 166/338 (49%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
IC + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 4028 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4087
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4146
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL- 199
DG+L+ +G G+LGLG + K +P +V L G Q A G ++AV+ G ++
Sbjct: 4147 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4204
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ + L G+ +K A G S + ++G V
Sbjct: 4205 AFGDGDYGKLGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 4255
Query: 260 YIFG-DRAVDKMLFQEGNHARR---P------------------SLISGGELYTWGSNEN 297
Y FG DR + + NH R P +L S G++Y WGSN
Sbjct: 4256 YTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSE 4315
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G LG+G + + P V V Q+S G H+AA
Sbjct: 4316 GQLGLGHTNHVREPTLVT-VLQGKNVRQISAGRCHSAA 4352
Score = 323 (118.8 bits), Expect = 6.7e-29, Sum P(3) = 6.7e-29
Identities = 108/335 (32%), Positives = 163/335 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLIS------------G----------GELYTWGSNENGCLGIG-SIDVLHSPER 313
A RP LI G E+Y WG+N G G G S + P++
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 314 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
V G + Q+S G H TA + +++ W
Sbjct: 712 VSG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 265 (98.3 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 100/385 (25%), Positives = 165/385 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
S S P L+K++ V + G H+ + ++GR V+ FG K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 599
Query: 276 NHARRPSLI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPER 313
N +P +I S G++Y WG CLG GS + +
Sbjct: 600 NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPK 657
Query: 314 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
+ + + + +S G H A+S + ++ WG ++S GQ G GN
Sbjct: 658 LIEELAATRIVDISIGDSHCLALSHDNEVYAWG------------NNSMGQCGQGNSTGP 705
Query: 373 I-HPTIVNFGENVKALQVSCGFNHT 396
I P V+ + + Q+S G +H+
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 253 (94.1 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 105/387 (27%), Positives = 164/387 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 3996 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4052
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 4053 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4111
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 4112 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4168
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 4169 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4220
Query: 277 HARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
P +L G +YT+G + L G + P+++
Sbjct: 4221 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4280
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ ++ V+ G +HT A+ S G + WG +S GQLG G+
Sbjct: 4281 P-VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4327
Query: 374 HPTIVNF--GENVKALQVSCGFNHTGA 398
PT+V G+NV+ Q+S G H+ A
Sbjct: 4328 EPTLVTVLQGKNVR--QISAGRCHSAA 4352
Score = 224 (83.9 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 85/300 (28%), Positives = 137/300 (45%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI---------SGGELYT----------W--GSNEN 297
+Y +G+ ++ + N P+L+ S G +T W G +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 356
G LG G + ++ P+ ++ + +V G + + A+ S G++ WG G G S +
Sbjct: 592 GKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Score = 209 (78.6 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 56/163 (34%), Positives = 78/163 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 198 (74.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 79/304 (25%), Positives = 127/304 (41%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3968 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4023
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 4024 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 4080
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------------- 284
+ G HS + E+G V+ +GD K+ + RRP I
Sbjct: 4081 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSC 4136
Query: 285 ---------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
S G+L+T+G+ + G LG+G+ PERV + QV+CG HT A
Sbjct: 4137 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLA 4195
Query: 336 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+S + W +G DG G+LG GN P V+ + +V+CG
Sbjct: 4196 VSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4245
Query: 396 TGAL 399
+ AL
Sbjct: 4246 SVAL 4249
Score = 178 (67.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 85/327 (25%), Positives = 139/327 (42%)
Query: 92 VYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
VY G GQL N+ + P + Q+ G + + I +G + G+
Sbjct: 3994 VYLWGAGRHGQLAEAGRNV---MVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLACGEG 4049
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSG 207
S G+LG G + + + T + L G Q + G + S+A+T G+V SWG G G
Sbjct: 4050 SYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4107
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG S + PR I+ L+G +V + GF HSA + +G+++ FG+
Sbjct: 4108 KLGHGN---------SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDY 4158
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
++ ++ + P ++ E Y G + C G+ + + + F + ++
Sbjct: 4159 GRLGLGNTSNKKLPERVTALEGYQIG--QVAC-GLNHTLAVSADGSMVWAFGDGDYGKLG 4215
Query: 328 CGWKHTAAISEGKI-LTWGWGGSH---GT-FS----EDGHS-SGGQ-----LGHGNDVDY 372
G TA S K+ + G G GT FS +DGH + GQ L G ++
Sbjct: 4216 LG-NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4274
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P + V V+ G HT AL
Sbjct: 4275 NRPQQIPVLAGVVIEDVAVGAEHTLAL 4301
Score = 160 (61.4 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 74/276 (26%), Positives = 118/276 (42%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y+WG NS+ QL G + K++ P S T +A G + ++ G V + G
Sbjct: 373 EVYVWGSNSSHQLVEGTQE-KILQ-PKLAPSFSDAQTIEA--GQYCTFVISTDGSVRACG 428
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL------EGVKVKIAAAGFLHSACIDEN 256
G GRLG G ++ + T E R IK++ +G + G + S +
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFE-PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 257 GRVYIFGDRAVDKM--LFQ---EGN--------HARRPSLISGGELYTWGSNENGCLGIG 303
G++ G+ + K L Q +G + ++ GELYTWG + G LG G
Sbjct: 488 GKLG-HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ + P V+ S V +VSCG HT A+S+ W +GG G+
Sbjct: 547 DSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFGGG----------DNGK 593
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LGHG+ P ++ + + +V G + AL
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 45 (20.9 bits), Expect = 6.7e-29, Sum P(3) = 6.7e-29
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 322 PVDQVSCG-WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
P+ +VS K I E G+ILT G GG + G +SG
Sbjct: 2026 PIQEVSFDPEKAQCCIVENGQILTHGSGGKGYGLASTGVTSG 2067
Score = 40 (19.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ G++L+ G+GG G +G S+ G ++ ++KE G
Sbjct: 2041 IVENGQILTHGSGGKG---YGLAST--GVTSGCYQWKFYIVKENRG 2081
Score = 38 (18.4 bits), Expect = 6.7e-29, Sum P(3) = 6.7e-29
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 376 TIVNFGENVKALQVSCG 392
++VNF +++K CG
Sbjct: 2982 SVVNFNQHMKRNHPGCG 2998
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 348 (127.6 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 109/338 (32%), Positives = 166/338 (49%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
IC + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 4031 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4090
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL- 199
DG+L+ +G G+LGLG + K +P +V L G Q A G ++AV+ G ++
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4207
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ + L G+ +K A G S + ++G V
Sbjct: 4208 AFGDGDYGKLGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 4258
Query: 260 YIFG-DRAVDKMLFQEGNHARR---P------------------SLISGGELYTWGSNEN 297
Y FG DR + + NH R P +L S G++Y WGSN
Sbjct: 4259 YTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSE 4318
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G LG+G + + P V V Q+S G H+AA
Sbjct: 4319 GQLGLGHTNHVREPTLVT-VLQGKNVRQISAGRCHSAA 4355
Score = 323 (118.8 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 108/335 (32%), Positives = 163/335 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLIS------------G----------GELYTWGSNENGCLGIG-SIDVLHSPER 313
A RP LI G E+Y WG+N G G G S + P++
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 314 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
V G + Q+S G H TA + +++ W
Sbjct: 712 VSG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 265 (98.3 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 100/385 (25%), Positives = 165/385 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
S S P L+K++ V + G H+ + ++GR V+ FG K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 599
Query: 276 NHARRPSLI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPER 313
N +P +I S G++Y WG CLG GS + +
Sbjct: 600 NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPK 657
Query: 314 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
+ + + + +S G H A+S + ++ WG ++S GQ G GN
Sbjct: 658 LIEELAATRIVDISIGDSHCLALSHDNEVYAWG------------NNSMGQCGQGNSTGP 705
Query: 373 I-HPTIVNFGENVKALQVSCGFNHT 396
I P V+ + + Q+S G +H+
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 253 (94.1 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 105/387 (27%), Positives = 164/387 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4055
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 4115 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223
Query: 277 HARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
P +L G +YT+G + L G + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ ++ V+ G +HT A+ S G + WG +S GQLG G+
Sbjct: 4284 P-VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4330
Query: 374 HPTIVNF--GENVKALQVSCGFNHTGA 398
PT+V G+NV+ Q+S G H+ A
Sbjct: 4331 EPTLVTVLQGKNVR--QISAGRCHSAA 4355
Score = 222 (83.2 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 84/297 (28%), Positives = 136/297 (45%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDGS 423
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 484 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLI---------SGGELYT----------W--GSNENGCL 300
+G+ ++ + N P+L+ S G +T W G +NG L
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 356
G G + ++ P+ ++ + +V G + + A+ S G++ WG G G S +
Sbjct: 595 GHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Score = 209 (78.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 56/163 (34%), Positives = 78/163 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 198 (74.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 79/304 (25%), Positives = 127/304 (41%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 4083
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------------- 284
+ G HS + E+G V+ +GD K+ + RRP I
Sbjct: 4084 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSC 4139
Query: 285 ---------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
S G+L+T+G+ + G LG+G+ PERV + QV+CG HT A
Sbjct: 4140 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLA 4198
Query: 336 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+S + W +G DG G+LG GN P V+ + +V+CG
Sbjct: 4199 VSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4248
Query: 396 TGAL 399
+ AL
Sbjct: 4249 SVAL 4252
Score = 178 (67.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 85/327 (25%), Positives = 139/327 (42%)
Query: 92 VYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
VY G GQL N+ + P + Q+ G + + I +G + G+
Sbjct: 3997 VYLWGAGRHGQLAEAGRNV---MVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLACGEG 4052
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSG 207
S G+LG G + + + T + L G Q + G + S+A+T G+V SWG G G
Sbjct: 4053 SYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG S + PR I+ L+G +V + GF HSA + +G+++ FG+
Sbjct: 4111 KLGHGN---------SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDY 4161
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
++ ++ + P ++ E Y G + C G+ + + + F + ++
Sbjct: 4162 GRLGLGNTSNKKLPERVTALEGYQIG--QVAC-GLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Query: 328 CGWKHTAAISEGKI-LTWGWGGSH---GT-FS----EDGHS-SGGQ-----LGHGNDVDY 372
G TA S K+ + G G GT FS +DGH + GQ L G ++
Sbjct: 4219 LG-NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P + V V+ G HT AL
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLAL 4304
Score = 160 (61.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 74/276 (26%), Positives = 118/276 (42%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y+WG NS+ QL G + K++ P S T +A G + ++ G V + G
Sbjct: 373 EVYVWGSNSSHQLVEGTQE-KILQ-PKLAPSFSDAQTIEA--GQYCTFVISTDGSVRACG 428
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL------EGVKVKIAAAGFLHSACIDEN 256
G GRLG G ++ + T E R IK++ +G + G + S +
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFE-PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 257 GRVYIFGDRAVDKM--LFQ---EGN--------HARRPSLISGGELYTWGSNENGCLGIG 303
G++ G+ + K L Q +G + ++ GELYTWG + G LG G
Sbjct: 488 GKLG-HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ + P V+ S V +VSCG HT A+S+ W +GG G+
Sbjct: 547 DSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFGGG----------DNGK 593
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LGHG+ P ++ + + +V G + AL
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 45 (20.9 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 322 PVDQVSCG-WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
P+ +VS K I E G+ILT G GG + G +SG
Sbjct: 2027 PIQEVSFDPEKAQCCIVENGQILTHGSGGKGYGLASTGVTSG 2068
Score = 40 (19.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ G++L+ G+GG G +G S+ G ++ ++KE G
Sbjct: 2042 IVENGQILTHGSGGKG---YGLAST--GVTSGCYQWKFYIVKENRG 2082
Score = 37 (18.1 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 194 GGGKVLSWGAGG-SGRLGHGQE 214
G G V GA G SGRL H Q+
Sbjct: 1687 GLGTVGHSGAKGESGRLHHYQD 1708
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 347 (127.2 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 108/338 (31%), Positives = 166/338 (49%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
IC + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 3290 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 3349
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 3350 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 3408
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL- 199
DG+L+ +G G+LGLG + K +P +V L G Q A G ++AV+ G ++
Sbjct: 3409 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW 3466
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ + L G+ +K A G S + ++G V
Sbjct: 3467 AFGDGDYGKLGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 3517
Query: 260 YIFG-DRAVDKMLFQEGNHARR---P------------------SLISGGELYTWGSNEN 297
Y FG DR + + NH R P +L S G++Y WGSN
Sbjct: 3518 YTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSE 3577
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G LG+G + + P V + Q+S G H+AA
Sbjct: 3578 GQLGLGHTNHVREPTLVT-VLQGKNIRQISAGRCHSAA 3614
Score = 252 (93.8 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 104/387 (26%), Positives = 164/387 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 3258 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 3314
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 3315 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 3373
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 3374 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 3430
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 3431 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 3482
Query: 277 HARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
P +L G +YT+G + L G + P+++
Sbjct: 3483 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 3542
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ ++ V+ G +HT A+ S G + WG +S GQLG G+
Sbjct: 3543 P-VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 3589
Query: 374 HPTIVNF--GENVKALQVSCGFNHTGA 398
PT+V G+N++ Q+S G H+ A
Sbjct: 3590 EPTLVTVLQGKNIR--QISAGRCHSAA 3614
Score = 198 (74.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 79/304 (25%), Positives = 127/304 (41%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3230 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3285
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 3286 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 3342
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------------- 284
+ G HS + E+G V+ +GD K+ + RRP I
Sbjct: 3343 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSC 3398
Query: 285 ---------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
S G+L+T+G+ + G LG+G+ PERV + QV+CG HT A
Sbjct: 3399 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLA 3457
Query: 336 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+S + W +G DG G+LG GN P V+ + +V+CG
Sbjct: 3458 VSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 3507
Query: 396 TGAL 399
+ AL
Sbjct: 3508 SVAL 3511
Score = 178 (67.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 85/327 (25%), Positives = 139/327 (42%)
Query: 92 VYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
VY G GQL N+ + P + Q+ G + + I +G + G+
Sbjct: 3256 VYLWGAGRHGQLAEAGRNV---MVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLACGEG 3311
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSG 207
S G+LG G + + + T + L G Q + G + S+A+T G+V SWG G G
Sbjct: 3312 SYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3369
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG S + PR I+ L+G +V + GF HSA + +G+++ FG+
Sbjct: 3370 KLGHGN---------SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDY 3420
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
++ ++ + P ++ E Y G + C G+ + + + F + ++
Sbjct: 3421 GRLGLGNTSNKKLPERVTALEGYQIG--QVAC-GLNHTLAVSADGSMVWAFGDGDYGKLG 3477
Query: 328 CGWKHTAAISEGKI-LTWGWGGSH---GT-FS----EDGHS-SGGQ-----LGHGNDVDY 372
G TA S K+ + G G GT FS +DGH + GQ L G ++
Sbjct: 3478 LG-NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3536
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P + V V+ G HT AL
Sbjct: 3537 NRPQQIPVLAGVVIEDVAVGAEHTLAL 3563
Score = 61 (26.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITV---DGELYMW 147
GQ G + G +P ++SGL +Q IS G HS A T D ++ W
Sbjct: 2 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 52
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 347 (127.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 108/338 (31%), Positives = 166/338 (49%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
IC + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 4034 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4093
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 4094 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4152
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL- 199
DG+L+ +G G+LGLG + K +P +V L G Q A G ++AV+ G ++
Sbjct: 4153 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4210
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ + L G+ +K A G S + ++G V
Sbjct: 4211 AFGDGDYGKLGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 4261
Query: 260 YIFG-DRAVDKMLFQEGNHARR---P------------------SLISGGELYTWGSNEN 297
Y FG DR + + NH R P +L S G++Y WGSN
Sbjct: 4262 YTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSE 4321
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G LG+G + + P V + Q+S G H+AA
Sbjct: 4322 GQLGLGHTNHVREPTLVT-VLQGKNIRQISAGRCHSAA 4358
Score = 313 (115.2 bits), Expect = 7.5e-27, Sum P(2) = 7.5e-27
Identities = 106/336 (31%), Positives = 162/336 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGS-GRLGHGQES 215
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G + G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTN 601
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 RV---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA 652
Query: 276 NHARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPE 312
A RP LI E+Y WG+N G G G S + P+
Sbjct: 653 T-ALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPK 711
Query: 313 RVQGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
+V G + Q+S G H TA + +++ W
Sbjct: 712 KVSG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 746
Score = 252 (93.8 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 98/386 (25%), Positives = 164/386 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKMALSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRA-VDKMLFQE 274
S S P L+K++ V + G H+ + ++GR V+ FG V K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGD 599
Query: 275 GNHARRPSLI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPE 312
N +P ++ S G++Y WG CLG GS +
Sbjct: 600 TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 657
Query: 313 RVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
++ + + + +S G H + + ++ WG ++S GQ G GN
Sbjct: 658 KLIEELAATRIVDISIGDSHVWLFVMDNEVYAWG------------NNSMGQCGQGNSTG 705
Query: 372 YI-HPTIVNFGENVKALQVSCGFNHT 396
I P V+ + + Q+S G +H+
Sbjct: 706 PITKPKKVSGLDGIAIQQISAGTSHS 731
Score = 252 (93.8 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 104/387 (26%), Positives = 164/387 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 4002 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4058
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 4059 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4117
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 4118 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4174
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 4175 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4226
Query: 277 HARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
P +L G +YT+G + L G + P+++
Sbjct: 4227 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4286
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ ++ V+ G +HT A+ S G + WG +S GQLG G+
Sbjct: 4287 P-VLAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4333
Query: 374 HPTIVNF--GENVKALQVSCGFNHTGA 398
PT+V G+N++ Q+S G H+ A
Sbjct: 4334 EPTLVTVLQGKNIR--QISAGRCHSAA 4358
Score = 211 (79.3 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 85/298 (28%), Positives = 136/298 (45%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KMALSFSDAQTIEAGQYCTFVISTDGS 423
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 484 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLI---------SGGELYT----------W--GSNEN-GC 299
+G+ ++ + N P+L+ S G +T W G +N G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGK 594
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 356
LG G + ++ P+ V+ + +V G + + A+ S G++ WG G G S +
Sbjct: 595 LGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 651
Score = 198 (74.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 79/304 (25%), Positives = 127/304 (41%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3974 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4029
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 4030 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 4086
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------------- 284
+ G HS + E+G V+ +GD K+ + RRP I
Sbjct: 4087 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSC 4142
Query: 285 ---------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
S G+L+T+G+ + G LG+G+ PERV + QV+CG HT A
Sbjct: 4143 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLA 4201
Query: 336 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+S + W +G DG G+LG GN P V+ + +V+CG
Sbjct: 4202 VSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4251
Query: 396 TGAL 399
+ AL
Sbjct: 4252 SVAL 4255
Score = 178 (67.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 85/327 (25%), Positives = 139/327 (42%)
Query: 92 VYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
VY G GQL N+ + P + Q+ G + + I +G + G+
Sbjct: 4000 VYLWGAGRHGQLAEAGRNV---MVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLACGEG 4055
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSG 207
S G+LG G + + + T + L G Q + G + S+A+T G+V SWG G G
Sbjct: 4056 SYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4113
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG S + PR I+ L+G +V + GF HSA + +G+++ FG+
Sbjct: 4114 KLGHGN---------SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDY 4164
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
++ ++ + P ++ E Y G + C G+ + + + F + ++
Sbjct: 4165 GRLGLGNTSNKKLPERVTALEGYQIG--QVAC-GLNHTLAVSADGSMVWAFGDGDYGKLG 4221
Query: 328 CGWKHTAAISEGKI-LTWGWGGSH---GT-FS----EDGHS-SGGQ-----LGHGNDVDY 372
G TA S K+ + G G GT FS +DGH + GQ L G ++
Sbjct: 4222 LG-NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4280
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P + V V+ G HT AL
Sbjct: 4281 NRPQQIPVLAGVVIEDVAVGAEHTLAL 4307
Score = 161 (61.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 75/276 (27%), Positives = 118/276 (42%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y+WG NS+ QL G + K++ P S T +A G + ++ G V + G
Sbjct: 373 EVYVWGSNSSHQLVEGTQE-KILQ-PKMALSFSDAQTIEA--GQYCTFVISTDGSVRACG 428
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL------EGVKVKIAAAGFLHSACIDEN 256
G GRLG G ++ + T E R IK++ +G + G + S +
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFE-PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 257 GRVYIFGDRAVDKM--LFQ---EGN--------HARRPSLISGGELYTWGSNENGCLGIG 303
G++ G+ + K L Q +G + ++ GELYTWG + G LG G
Sbjct: 488 GKLG-HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ + P V+ S V +VSCG HT A+S+ W +GG G+
Sbjct: 547 DSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNV---------GK 594
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LGHG+ P +V + + +V G + AL
Sbjct: 595 LGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLAL 630
Score = 44 (20.5 bits), Expect = 7.5e-27, Sum P(2) = 7.5e-27
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 322 PVDQVSCGWKHTAA--ISEGKILTWGWGGSHGTFSEDGHSSG 361
P+ +VS + + G+ILT G GG + G +SG
Sbjct: 2030 PIQEVSFDPEKAQCCLVENGQILTHGSGGKGYGLASTGVTSG 2071
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 299 (110.3 bits), Expect = 5.7e-26, P = 5.7e-26
Identities = 81/225 (36%), Positives = 121/225 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 99 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQLTPC--RVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
L+ ++ E E V V+IAA H SA ++G+VY++G
Sbjct: 276 PLQ--------IMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 287 (106.1 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 75/216 (34%), Positives = 109/216 (50%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 114 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
TP + L GV + A G+ H+ + + G +Y +G
Sbjct: 223 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWG 258
Score = 201 (75.8 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 52/138 (37%), Positives = 74/138 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N L PL+I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 265 LGTG-NKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFACTDDVF 333
Score = 199 (75.1 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 82/311 (26%), Positives = 142/311 (45%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + T + E++++G N + LG G + ++P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVP--KKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G V + T G+V +WG G +LG+G + G + T L
Sbjct: 70 ALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQ--G-VTPVQVCTNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------------DRAV-----DK 269
+K++ ++V A G HS + +G +Y +G R V DK
Sbjct: 127 LKKV--IEV---ACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDK 181
Query: 270 MLFQEG-NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
M+ ++++ GE+Y WG N NG LG+G+ +P RV + Q++C
Sbjct: 182 MVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVC-ILQIAC 240
Query: 329 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
G+ HT A+++ +L + WG + T+ GQLG GN + + P + E + ++
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN--TY--------GQLGTGNKSNQLSPLQIMM-EKERVVE 288
Query: 389 VS-CGFNHTGA 398
++ C HT A
Sbjct: 289 IAACHSAHTSA 299
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 41/128 (32%), Positives = 63/128 (49%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT- 333
G+H +L G+LY WG N G +G GS +P RV + V ++CG +
Sbjct: 136 GSH-HSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSM 194
Query: 334 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A ++ G++ WG+ G+ GQLG GN+ + + P V V LQ++CG+
Sbjct: 195 AVVNNGEVYGWGYNGN------------GQLGLGNNGNQLTPCRVAALHGVCILQIACGY 242
Query: 394 NHTGALLE 401
HT AL +
Sbjct: 243 AHTLALTD 250
Score = 86 (35.3 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+A +L G LY WG+N G LG G+ SP ++ E V+ +C HT+A
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMME-KERVVEIAACHSAHTSAA 300
Query: 337 S--EGKILTWG 345
G++ WG
Sbjct: 301 KTQSGQVYMWG 311
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 340 (124.7 bits), Expect = 9.2e-29, P = 9.2e-29
Identities = 113/387 (29%), Positives = 178/387 (45%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4054 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4111
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4112 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4171 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4224
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4225 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4279
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS+D + P++
Sbjct: 4280 DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 4339
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TWG + GQLG G
Sbjct: 4340 VAA-LQGKKIISIATGSLHCVACSDSGEVYTWG------------DNDEGQLGDGTVTAI 4386
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 4387 QRPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 311 (114.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 104/332 (31%), Positives = 152/332 (45%)
Query: 39 FAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYAT 95
FA +G+G GRLG+G +S W P + + + +K +A GG H L LT G VYA
Sbjct: 4104 FATGYGSG--GRLGVGGSDS-WAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAW 4160
Query: 96 GLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + G+LG + Y L ++G+ V I+ G HS+AIT G + WGK G
Sbjct: 4161 GEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGSAHSAAITASGHVLTWGKGRYG 4218
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGH 211
+LG G ++ P VE L G A G Q++ +T V SWG G G+LG
Sbjct: 4219 RLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4276
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G G S P I+ L G+ V G S + ++G VY +G ++
Sbjct: 4277 G------G---SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG 4327
Query: 272 FQEGNHARRP------------SLISG----------GELYTWGSNENGCLGIGSIDVLH 309
+H RRP S+ +G GE+YTWG N+ G LG G++ +
Sbjct: 4328 HGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4387
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
P R+ + +V+CG HT A+S ++
Sbjct: 4388 RP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4418
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 89/290 (30%), Positives = 145/290 (50%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
L L + +Y +K K+ G K ++ TL + + WG G+ G+LG G+ + +
Sbjct: 3061 LPHQLPVLRQYVVK---KVAVHSG-GKHALALTLDGKVFS-WGEGEDGKLGHGNRTTLDK 3115
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A ++ +ACG +H+ ++ G +Y GL ++G+LG +N L+P ++ L
Sbjct: 3116 PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTT-QLKPKLVTAL 3174
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ VVQ++ G + A+T DG ++ WG G+LG G P ++E LSGI
Sbjct: 3175 AGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGS--DTPHEIERLSGIG 3232
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q G + S+A+T G+V +WG G RLGHG + + R P+ I L G
Sbjct: 3233 VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV----RK-----PQPIGGLRGR 3283
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--RRPSLISG 286
+V A G LH + + G+VY +GD D GN ++P+L+ G
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFVNKKPALVIG 3331
Score = 283 (104.7 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 109/387 (28%), Positives = 179/387 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P + L+ + GG+ +LF+ ++ G VYA G
Sbjct: 2990 VWGLNDKEQLG-GLKGSKVKVPTFSQTISR--LRPIHIAGGSKSLFIVSQDGKVYACGEG 3046
Query: 99 DFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+LG ++ N+ + L LR +KK V + +G H+ A+T+DG+++ WG+ +G+
Sbjct: 3047 TNGRLGLGVTHNVPLPHQLPVLRQYVVKK--VAVHSGGKHALALTLDGKVFSWGEGEDGK 3104
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + + P VE L + A G S A++ G++ +WG G GRLGHG
Sbjct: 3105 LGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD- 3161
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF 272
+T++ P+L+ L G +V A G + + E+G V+ +GD K+
Sbjct: 3162 --------NTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGR 3213
Query: 273 --QEGN---HA-RRPS----------------LISGGELYTWGSNENGCLGIGSIDVLHS 310
EG+ H R S L GE++TWG + LG G +
Sbjct: 3214 GGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRK 3273
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P+ + G V V+ G H A+++ G++ WG ++ H GQ G GN
Sbjct: 3274 PQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---------DNDH---GQQGSGNT 3320
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHT 396
P +V + V +V+CG +H+
Sbjct: 3321 FVNKKPALVIGLDAVFVNRVACGSSHS 3347
Score = 259 (96.2 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 101/350 (28%), Positives = 156/350 (44%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYH 133
AL+ GGA T +Y G N GQLG E P L + V Q++ G
Sbjct: 4042 ALSWGGAST--------IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV-QLAGGEQ 4092
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVA 191
A+T DG+L+ G S G+LG+G + IP T + L +F K+ A+ G + +A
Sbjct: 4093 SLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIP--TLLGSLQHVFVKKVAVNSGGKHCLA 4150
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T G+V +WG G G+LGHG S + R P+L++ L G+ V A G HSA
Sbjct: 4151 LTTEGEVYAWGEGEDGKLGHGNRMS---YDR------PKLVEHLNGMSVADIACGSAHSA 4201
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--------------SGG---------- 287
I +G V +G ++ + RP L+ SG
Sbjct: 4202 AITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDD 4261
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
+++WG + G LG G D P +++ + V +V CG + + A+++ G + TWG
Sbjct: 4262 NVWSWGDGDYGKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGK 4320
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNH 395
G H +LGHG+ VD++ P V + K + ++ G H
Sbjct: 4321 GDFH------------RLGHGS-VDHVRRPKKVAALQGKKIISIATGSLH 4357
Score = 250 (93.1 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 87/337 (25%), Positives = 148/337 (43%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V GLND QLG + + + + + I+ G ++ DG++Y G+ +
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV SWG G G+L
Sbjct: 3048 NGRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKL 3105
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG R+T + PRL++ L K++ A G HSA I G +Y +G +
Sbjct: 3106 GHGN--------RTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3156
Query: 270 MLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLGIGSI 305
+ + +P L++ G +++WG + G LG G
Sbjct: 3157 LGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS 3216
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ +P ++ S V Q+ CG + + A++ G++ TWG G + +L
Sbjct: 3217 EGSDTPHEIER-LSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYY------------RL 3263
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG D P + + + V+ G H A+ +
Sbjct: 3264 GHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 3300
Score = 222 (83.2 bits), Expect = 8.2e-17, Sum P(3) = 8.2e-17
Identities = 56/176 (31%), Positives = 88/176 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 752 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 809
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 810 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 865
Score = 211 (79.3 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 63/224 (28%), Positives = 108/224 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ RLG G +R P +A E+H ++++ CG +++ +T G + G + +
Sbjct: 640 WGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 699
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + SL L ++ VV ++ +G HS A+T +G ++ WG G+LG G
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 759
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
+ PI VE L + ++ G + SVA++ G++ +WG LGH E S+ G
Sbjct: 760 NGSLQPI--LVESLPRV--QRVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQG 813
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRL+ L+ ++ A H + +G V+ +G
Sbjct: 814 CS------VPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWG 851
Score = 193 (73.0 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 48/150 (32%), Positives = 72/150 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT G V+ G D+ +
Sbjct: 3203 WGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYR 3262
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +P I GL+ + V+ ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3263 LGHGGD-QHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTF 3321
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V P V L +F + A G S+A
Sbjct: 3322 --VNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 177 (67.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 86/295 (29%), Positives = 131/295 (44%)
Query: 128 ISTGYHHSSAITVDGEL----YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+ST H +A + +L +WG N QLG G K +KV +PT + +S + A
Sbjct: 2969 VSTS-HEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIA 3025
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI-LGF-LRSTSEYTPRLIKELEGVKVK 241
G + V+ GKV + G G +GRLG G ++ L L +Y + + G K
Sbjct: 3026 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHA 3085
Query: 242 IAAA--GFLHSACIDENGRVYIFGDRA-VDKMLFQEGNHARR-----------PSLISGG 287
+A G + S E+G++ G+R +DK E A++ ++ S G
Sbjct: 3086 LALTLDGKVFSWGEGEDGKLG-HGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQG 3144
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTW 344
ELYTWG E G LG G P+ V + V QV+CG + T A++E G + +W
Sbjct: 3145 ELYTWGLGEYGRLGHGDNTTQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSW 3203
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G G F + G GG G+D + + G +Q+ CG + AL
Sbjct: 3204 G----DGDFGKLGR--GGS--EGSDTPHEIERLSGIG----VVQIECGAQFSLAL 3246
Score = 141 (54.7 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 47/159 (29%), Positives = 69/159 (43%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
ES P + F+ +K +AC L L++ G +Y +L E EPL
Sbjct: 561 ESAGVPTLSCRFQ---IKQVACCETQMLILSQEGKLYTW------RLAKPE-----AEPL 606
Query: 117 RISGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+ + +V G+ H AI + Y WG + +LG G A+ +P TK+
Sbjct: 607 PMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP--TKIAA 664
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
L + G S A+T GG +L+WG G RLGHG
Sbjct: 665 LEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHG 703
Score = 81 (33.6 bits), Expect = 8.2e-17, Sum P(3) = 8.2e-17
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3297 AVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 3349
Score = 53 (23.7 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 282 SLISGGELYTWGSNENG--C-LGIGSIDVLHSPERVQGPFSESPVDQVSC 328
+L S GE++ WG N++ C + S +L +P V P P ++C
Sbjct: 840 ALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLP--TFPASGIAC 887
Score = 43 (20.2 bits), Expect = 8.2e-17, Sum P(3) = 8.2e-17
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 218 LGFLRSTSEYTPRLIKEL 235
LGF+R+ S PRL EL
Sbjct: 2077 LGFIRAISGDCPRLCLEL 2094
Score = 41 (19.5 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 203 AGGSGRLGHGQESSILGFLRSTSEY 227
+ G G G G +LG L S Y
Sbjct: 1770 SSGGGSTGSGSSLHVLGQLNMISAY 1794
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 330 (121.2 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 105/338 (31%), Positives = 155/338 (45%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG+G+ E S + P C F+ LK +ACG H+LFL G VY G N G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + G S P + L + + +S G HS A+ G+++ WG GQLGLG
Sbjct: 65 QLGHDK--GGS-RPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT- 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + + +P ++ L Q G +A++ G++ WG SG+LG G+ G
Sbjct: 121 AEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGK-----G- 174
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
S +P+ +K L G+ + +AG HS + +G V+ +G DRAV
Sbjct: 175 --EPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAV 232
Query: 268 ---------DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
K+++ +L G L+T+G+ G LG S P RV
Sbjct: 233 PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVM-EL 291
Query: 319 SESPVDQVSCGWKHTAAI--SEGKILTWGWG--GSHGT 352
+ V Q++CG HT A S G I +G G GT
Sbjct: 292 MGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGT 329
Score = 270 (100.1 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 92/286 (32%), Positives = 135/286 (47%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG SR P + A + + ++CG AH+L + E G V+A G D GQL
Sbjct: 59 GSNSCGQLGHDKGGSR--PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-KA 161
G+ P I L + + Q+ G HH A++ DG+L++WG+NS+GQLGLGK +
Sbjct: 117 GLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEP 176
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSI-- 217
+ + P P K C GI Q + G + S A++ G V WG +G+LG Q+ ++
Sbjct: 177 STLSPQPLKSLC--GIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPC 234
Query: 218 -LGFLRSTS--------EYTPRLIKELEGVKVKIAAAGFL-HSACIDEN--GRVYIFGDR 265
+ FLRS E+T L KE + G L H + +E RV
Sbjct: 235 HIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGT 294
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
V ++ NH + S G +Y +G N G LG G SP
Sbjct: 295 EVSQIACGR-NHTLA-FVPSTGLIYAFGCNTQGQLGTGIRGSAKSP 338
Score = 228 (85.3 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 93/330 (28%), Positives = 147/330 (44%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G + GQLGI + EP + + +++ G HS + DG +Y G NS GQ
Sbjct: 6 GSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQ 65
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG K ++ P V L + G S+AV G+V +WGAG G+LG G
Sbjct: 66 LGHDKGGSR----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTA 121
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ PRLIK+L ++ G H + ++G+++++G+ + ++ +
Sbjct: 122 EEAVR--------VPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGK 173
Query: 275 GNHAR---RP--SL-------IS-GGE----------LYTWGSNENGCLGIGSIDVLHSP 311
G + +P SL IS GG+ ++ WG N G LG+ P
Sbjct: 174 GEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVP 233
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
++ S+ V +SCG +HTAA++ EG + T+G G S GQLGH +
Sbjct: 234 CHIKFLRSQKVV-YISCGEEHTAALTKEGGLFTFGNG------------SKGQLGHDSTR 280
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ P V + Q++CG NHT A +
Sbjct: 281 NEPLPRRVMELMGTEVSQIACGRNHTLAFV 310
Score = 223 (83.6 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 80/279 (28%), Positives = 123/279 (44%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG + GQLG+G A V P G K+ A G + S+ + G V + G+
Sbjct: 5 WGSSGAGQLGIGASEASVFE-PRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSC 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGH + S P L+ L+ K+ + G HS ++E G+V+ +G
Sbjct: 64 GQLGHDKGGS-----------RPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGD 112
Query: 264 ---------DRAVD-----KMLFQE-------GNHARRPSLISGGELYTWGSNENGCLGI 302
+ AV K L + GNH +L G+L+ WG N +G LG+
Sbjct: 113 GGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNH-HCIALSKDGQLFVWGENSSGQLGL 171
Query: 303 GSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
G + SP+ ++ P+ Q+S G H+ A+S G + +GWG +S
Sbjct: 172 GKGEPSTLSPQPLKS-LCGIPLTQISAGGDHSFALSFSGAV--FGWG----------KNS 218
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG ++ D P + F + K + +SCG HT AL
Sbjct: 219 AGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAAL 257
Score = 218 (81.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 59/178 (33%), Positives = 91/178 (51%)
Query: 42 LWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG G+LGLG E S P + L ++ GG H+ L+ +G V+ G N
Sbjct: 160 VWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSA 219
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+++ ++ P I L+ + VV IS G H++A+T +G L+ +G S GQLG
Sbjct: 220 GQLGLNDEQDRAV-PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLG--H 276
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ + P+P +V L G Q A G ++A V G + ++G G+LG G S
Sbjct: 277 DSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGS 334
Score = 168 (64.2 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 44/143 (30%), Positives = 69/143 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+ G ++ G GQ
Sbjct: 214 WGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG L P R+ L EV QI+ G +H+ A + G +Y +G N+ GQLG G +
Sbjct: 274 LGHDSTRNEPL-PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIR 332
Query: 161 AAKVIPIP-TKVE--CLSGIFTK 180
+ P+P + ++ C+ +T+
Sbjct: 333 GSAKSPVPVSNIQPLCIGNAYTR 355
Score = 150 (57.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 60/226 (26%), Positives = 96/226 (42%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG+ G+G+LG G + S + PR +G +K A G HS + +G
Sbjct: 2 MLCWGSSGAGQLGIGASEA--------SVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSL--------ISG--------------GELYTWGSN 295
VY G + ++ +G RP L ISG G+++ WG+
Sbjct: 54 SVYTCGSNSCGQLGHDKGGS--RPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAG 111
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 354
+ G LG+G+ + R+ E + QV CG H A+S +G++ WG
Sbjct: 112 DGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWG--------- 162
Query: 355 EDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+S GQLG G + + P + + Q+S G +H+ AL
Sbjct: 163 ---ENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFAL 205
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 240 (89.5 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 71/225 (31%), Positives = 107/225 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P S F K +K + GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ L S L + Q++ G+ + +T +G++ G NS GQLG+
Sbjct: 80 QLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVPHGP 139
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGHGQESSIL 218
+ + +P +E AA G ++A T G V WG G SGR L GQ +
Sbjct: 140 RRCV-VPQAIEVQREKVVSIAA-GLRHALAATASGLVFQWGTGLASSGRRLCPGQTLPL- 196
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
FL T++ ++ LE + AG HSA + + G +Y++G
Sbjct: 197 -FL--TAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWG 238
Score = 202 (76.2 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 69/229 (30%), Positives = 107/229 (46%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
N D G+LGLG E +C + ++ +ACG T+ LT+ G V + G N FGQLG
Sbjct: 76 NKD-GQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQLG 134
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN--SNGQ-LGLGKKA 161
+ + P I +++VV I+ G H+ A T G ++ WG S+G+ L G+
Sbjct: 135 VPHGPRRCVVPQAIEVQREKVVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCPGQTL 194
Query: 162 AKVIPI--PTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P+KV G+ QA G S ++T G++ WG+ HGQ +S
Sbjct: 195 PLFLTAKEPSKVTV--GLENSQAVCVLAGSGHSASLTDAGELYVWGSNK-----HGQLAS 247
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFG 263
FL P+ I+ K+AA +G+ H E G+V+ +G
Sbjct: 248 QAAFLP-----LPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWG 291
Score = 196 (74.1 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 64/184 (34%), Positives = 96/184 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFE--KHSLKALACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E + + ++A G H L T +G V+ TGL
Sbjct: 126 GSNSFGQLGVP--HGPRRCVVPQAIEVQREKVVSIAAGLRHALAATASGLVFQWGTGLAS 183
Query: 100 FGQ-LGISENIGYSL---EPLRIS-GLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G+ L + + L EP +++ GL+ + V + G HS+++T GELY+WG N +G
Sbjct: 184 SGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHG 243
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QL +AA +P+P K+E K AA+ G+ VA T GKV +WG G+LG
Sbjct: 244 QLA--SQAA-FLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLGR 300
Query: 212 GQES 215
ES
Sbjct: 301 TLES 304
Score = 176 (67.0 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 57/176 (32%), Positives = 90/176 (51%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S K V +I+ G HS+ +T G L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLL-PQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLGH-TEDVLYF-TLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G HG ++ P+ I E++ KV AAG H+ +G V+ +G
Sbjct: 134 GVPHGPRRCVV----------PQAI-EVQREKVVSIAAGLRHALAATASGLVFQWG 178
Score = 123 (48.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 38/127 (29%), Positives = 55/127 (43%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L+ WG NS GQLGLG K ++P C G K+ G S VT G + G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGC-VKRITGGGGHSAIVTDQGSLFVCGL 75
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G +L F L K L G ++ A G+ + + +NG+V G
Sbjct: 76 NKDGQLGLGHTEDVLYFT---------LCKSLLGCPIQQVACGWDFTIILTKNGQVLSCG 126
Query: 264 DRAVDKM 270
+ ++
Sbjct: 127 SNSFGQL 133
Score = 120 (47.3 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-G 339
SL GELY WGSN++G L L P++++ F V V GW H A +E G
Sbjct: 227 SLTDAGELYVWGSNKHGQLA-SQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETG 285
Query: 340 KILTWG 345
K+ TWG
Sbjct: 286 KVFTWG 291
Score = 80 (33.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 36/129 (27%), Positives = 54/129 (41%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP----FSESPVDQVSCGWKHT-AAIS 337
L G++ + GSN G LG+ H P R P V ++ G +H AA +
Sbjct: 116 LTKNGQVLSCGSNSFGQLGVP-----HGPRRCVVPQAIEVQREKVVSIAAGLRHALAATA 170
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI----HPTIVNFG-ENVKALQVSCG 392
G + WG G + SSG +L G + P+ V G EN +A+ V G
Sbjct: 171 SGLVFQWGTGLA---------SSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAG 221
Query: 393 FNHTGALLE 401
H+ +L +
Sbjct: 222 SGHSASLTD 230
Score = 46 (21.3 bits), Expect = 8.9e-21, Sum P(2) = 8.9e-21
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPE 312
G+++TWG + G LG L SPE
Sbjct: 285 GKVFTWGRADYGQLG----RTLESPE 306
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 329 (120.9 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 106/339 (31%), Positives = 162/339 (47%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+ + L+ P VC S+K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L E +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--KPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL-M 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA 266
F S+ +P+ ++ LEG+ + AAG HS + +G V+ +G DR
Sbjct: 175 F---PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231
Query: 267 ---------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
K+++ L G ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWG--GSHGT 352
S V Q++CG +HT A S G I +G G G GT
Sbjct: 291 LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 242 (90.2 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 82/274 (29%), Positives = 122/274 (44%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG----HGQESSI-LGFLRSTS--------E 226
Q A G S A++ G V WG +G+LG +ES + LR+ E
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEE 252
Query: 227 YTPRLIKELEGVKVKIAAAGFL-HSACIDE-NGR--VYIFGDRAVDKMLFQEGNHARRPS 282
+T L K + G L H + DE N R + + G ++ A PS
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 312
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G +Y +G G LG G + P V+G
Sbjct: 313 ---SGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 179 (68.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 76/280 (27%), Positives = 117/280 (41%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G + SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGH +E + P I L + A G HS + + G+++ +G
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 264 D---------------RAVDKMLFQE------GN-HARRPSLISGGELYTWGSNENGCLG 301
D R + K+ Q GN H +L + G+ +TWG N +G LG
Sbjct: 113 DGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCL--ALAADGQFFTWGKNSHGQLG 170
Query: 302 IGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 359
+G SP+RV+ P+ QV+ G H+ A+S G + +GWG +
Sbjct: 171 LGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAV--FGWG----------MN 217
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ GQLG ++ D P V K + +SCG HT L
Sbjct: 218 NAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVL 257
Score = 173 (66.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 327 (120.2 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 105/339 (30%), Positives = 161/339 (47%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+ S L+ P VC S+K +ACGG H++FL E G VY G+N
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + ++ ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-M 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA 266
F TS P+ ++ LEG+ + AAG HS + +G V+ +G DR
Sbjct: 175 FPSQTS---PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 267 ---------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
K+++ L G ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWG--GSHGT 352
S V Q++CG +HT A+ S G I +G G G GT
Sbjct: 291 LMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGT 329
Score = 242 (90.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 81/274 (29%), Positives = 120/274 (43%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI-----LGFLRSTS--------E 226
Q A G S A++ G V WG +G+LG E + LR+ E
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 227 YTPRLIKELEGVKVKIAAAGFL-HSACIDE-NGR--VYIFGDRAVDKMLFQEGNHARRPS 282
+T L K + G L H + DE N R + + G ++ A PS
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS 312
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G +Y +G G LG G + P V+G
Sbjct: 313 ---SGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 42/130 (32%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A+ G +Y +G + GQLG G
Sbjct: 274 LG-HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 59/225 (26%), Positives = 97/225 (43%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+ G S++ G + P++ + + +K A G HS + E+G
Sbjct: 1 MLCWGYWSLGQ--PGISSNLQGIVAE-----PQVCRFVSDRSIKEVACGGNHSVFLLEDG 53
Query: 258 RVYIFGDRAVDKMLFQ-EGN-----------H--------ARRPSLISGGELYTWGSNEN 297
VY G ++ + EGN H + +L G+L++WG+ +
Sbjct: 54 EVYTCGVNTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 298 GCLGIGSI-DVLHSPERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSE 355
G LG+ + D + P +Q ++ + QVSCG W A ++G+ TWG +
Sbjct: 114 GQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLALAADGQFFTWG---------K 163
Query: 356 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ H GQLG G + P V E + QV+ G H+ AL
Sbjct: 164 NSH---GQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205
Score = 120 (47.3 bits), Expect = 0.00076, P = 0.00076
Identities = 41/127 (32%), Positives = 62/127 (48%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G H+ SL G ++ WG N G LG+ SP V+ ++ V +SCG +HTA
Sbjct: 199 GAHSFALSL--SGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTA 255
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
+++ G + T+G G S GQLGH + D ++P V + Q++CG
Sbjct: 256 VLTKSGGVFTFGAG------------SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303
Query: 394 NHTGALL 400
HT AL+
Sbjct: 304 QHTLALV 310
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 327 (120.2 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 81/244 (33%), Positives = 124/244 (50%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSR 166
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 167 SQA-IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISG 286
LI G
Sbjct: 280 LIEG 283
Score = 263 (97.6 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 89/304 (29%), Positives = 138/304 (45%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKK-EVVQISTGYHH 134
A G H+L L VY+ G N +GQLG + S E P I L V +S G H
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLG--QRRDQSTERPEPIQALNDLHVDLVSCGKEH 85
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G S+A++
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSE 144
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG HS +
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALS 196
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISG----------------------GE 288
G + +G ++ GN + +P I G+
Sbjct: 197 LTGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGW 346
++T+G N +G L P+ ++G V Q+ C HT A + G++++ G
Sbjct: 256 VFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGR 313
Query: 347 GGSH 350
G SH
Sbjct: 314 GPSH 317
Score = 255 (94.8 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 91/307 (29%), Positives = 139/307 (45%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
SG+ E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ +
Sbjct: 20 SGI--ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLH 75
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+ G E SVAV GKV +WGAG G+LG G+ I + P IK L G+
Sbjct: 76 VDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGI 127
Query: 239 KVKIAAAGFLHSACIDENGRVYIFG--------------DRAV-DKMLFQEG-------- 275
K+ + G HS + E+G V+ +G +A+ K+ EG
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187
Query: 276 --NHARRPSLISGGELYTWGSNENGCLGIGSIDV---LHSPERVQGPFSESPVDQVSCGW 330
H+ SL G + WGSN +G L + V ++ P + G V +SCG+
Sbjct: 188 GGTHSFALSLT--GTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGY 244
Query: 331 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
+HTA ++E G++ T+G G S G S GQ G P ++ G + Q+
Sbjct: 245 EHTAVLTEEGQVFTFG-GNSSGQLQPSPRS--GQRG---------PQLIE-GIGGRVSQI 291
Query: 390 SCGFNHT 396
C HT
Sbjct: 292 ECASYHT 298
Score = 244 (91.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 66/224 (29%), Positives = 107/224 (47%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 141 (54.7 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 45/142 (31%), Positives = 66/142 (46%)
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
G ++ + G H L S +Y+ G N G LG PE +Q ++
Sbjct: 18 GTSGIELLQAASGEH-HSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA-LNDLH 75
Query: 323 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN--DVDYIHPTIVN 379
VD VSCG +H+ A+ +GK+ WG G S GQLG G ++ ++ PT +
Sbjct: 76 VDLVSCGKEHSVAVCHKGKVFAWGAG------------SEGQLGIGEFKEISFM-PTKIK 122
Query: 380 FGENVKALQVSCGFNHTGALLE 401
+K +QVSCG H+ AL E
Sbjct: 123 ALAGIKIIQVSCGHYHSLALSE 144
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 39/130 (30%), Positives = 63/130 (48%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAA 335
H +L G +++WG N G LG+G + P++V+ P+ QV+ G H+ A
Sbjct: 136 HYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQVAAGGTHSFA 194
Query: 336 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV-DYIH-PTIVNFGENVKALQVSC 391
+S G ++GWG + GQL GN V + I+ P + +N+ + +SC
Sbjct: 195 LSLTGT--SFGWGSNRS----------GQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242
Query: 392 GFNHTGALLE 401
G+ HT L E
Sbjct: 243 GYEHTAVLTE 252
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 37/116 (31%), Positives = 56/116 (48%)
Query: 287 GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 344
G+++ WG+ G LGIG ++ P +++ + + QVSCG H+ A+SE G + +W
Sbjct: 93 GKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKIIQVSCGHYHSLALSEDGHVFSW 151
Query: 345 GWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G +S GQLG G N P V E + QV+ G H+ AL
Sbjct: 152 G------------RNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL 195
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 326 (119.8 bits), Expect = 3.8e-28, P = 3.8e-28
Identities = 105/339 (30%), Positives = 167/339 (49%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS L+ P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E+ G EP+ ++G + +V ++ G HS A++ G+++ WG S+GQLGL
Sbjct: 64 GQLG-HESEGSKPEPIGALAG--QHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN-- 276
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ L E +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 277 ---HAR-----RPSLISGGE-----------LYTWGSNENGCLGIGSIDVLHSPERVQGP 317
H + + IS GE ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWG--GSHGT 352
S V Q++CG HT A S G I +G G G GT
Sbjct: 291 LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGT 329
Score = 268 (99.4 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 89/292 (30%), Positives = 133/292 (45%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG S S+ P+ A + +ACG +H++ L++ G V++ G GQLG++
Sbjct: 64 GQLGHESEGSKPEPI--GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI 121
Query: 109 IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
P I L ++ ++QIS G H A+ DG+ + WG+NS GQLGLGK+
Sbjct: 122 EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS- 180
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +V+ L GI Q A G S A++ G V WG SG+LG E
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD---------RE 231
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------D--------RAVDKM 270
+P +K L KV + G H+A + ++G V+ FG D R V ++
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 271 LFQE------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ E G H + S G +Y +G G LG G + P V+G
Sbjct: 292 MGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
Score = 254 (94.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 92/331 (27%), Positives = 150/331 (45%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + FGQ GI N+ + ++ G + V +++ G +HS + DGE+Y G N+ G
Sbjct: 5 GYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + +K P + L+G A G SVA++ G+V SWGAG G+LG
Sbjct: 65 QLGHESEGSK----PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-- 118
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
++I + PRLIK+L + + G H + +G+ + +G + ++ L
Sbjct: 119 -TTI-----EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Query: 273 QEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHS 310
+E P + G ++ WG N +G LG+ S
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P V+ S+ V +SCG +HTA +++ G + T+G G S GQLGH +
Sbjct: 233 PCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
D ++P V + Q++CG +HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310
Score = 207 (77.9 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 83/280 (29%), Positives = 119/280 (42%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG +S GQ G+G +IP P + K+ A G SV + G+V + G
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGH E S P I L G + A G HS + + G+V+ +G
Sbjct: 64 GQLGHESEGS-----------KPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112
Query: 264 ---------DRAVD-----KMLFQE-------GN-HARRPSLISGGELYTWGSNENGCLG 301
+ AV K L Q+ GN H +L + G+ +TWG N G LG
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCL--ALAADGQFFTWGQNSYGQLG 170
Query: 302 IGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 359
+G SP+RV+ P+ QV+ G H+ A+S G + +GWG +
Sbjct: 171 LGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAV--FGWG----------KN 217
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
S GQLG ++ D P V + K + +SCG HT L
Sbjct: 218 SSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 324 (119.1 bits), Expect = 4.2e-28, Sum P(2) = 4.2e-28
Identities = 109/335 (32%), Positives = 164/335 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLIS------------G----------GELYTWGSNENGCLGIG-SIDVLHSPER 313
A RP LI G E+Y WG+N G G G S + P++
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 314 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
V G S + Q+S G H TA + +++ W
Sbjct: 712 VSGLDGVS-IQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 315 (115.9 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 91/269 (33%), Positives = 140/269 (52%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
+C + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 4033 VCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA 4151
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVL 199
DG+L+ +G G+LGLG + K +P +V L G Q A G +VAV T G V
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVW 4209
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ + L G+ +K A G S + ++G V
Sbjct: 4210 AFGDGDYGKLGLGN---------STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHV 4260
Query: 260 YIFGDRAVDKML-FQEG---NHARRPSLI 284
Y FG + D+++ EG NH RP +
Sbjct: 4261 YTFG-QVSDRLIGLPEGRARNH-NRPQQV 4287
Score = 314 (115.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 76/245 (31%), Positives = 129/245 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G +G + G
Sbjct: 4225 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPE-----G- 4276
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4277 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4335
Query: 281 PSLIS 285
P+LI+
Sbjct: 4336 PTLIT 4340
Score = 267 (99.0 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 101/385 (26%), Positives = 165/385 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
S S P L+K++ V + G H+ + ++GR V+ FG K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 599
Query: 276 NHARRPSLI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPER 313
N +P +I S G++Y WG CLG GS + +
Sbjct: 600 NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPK 657
Query: 314 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
+ + + + +S G H A+S + ++ WG ++S GQ G GN
Sbjct: 658 LIEELAATRIVDISIGDSHCLALSHDNEVYAWG------------NNSMGQCGQGNSTGP 705
Query: 373 I-HPTIVNFGENVKALQVSCGFNHT 396
I P V+ + V Q+S G +H+
Sbjct: 706 ITKPKKVSGLDGVSIQQISAGTSHS 730
Score = 256 (95.2 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 85/280 (30%), Positives = 135/280 (48%)
Query: 77 ACGG-AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
+CG H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ H
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKH 4145
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-T 193
S+ +T DG+L+ +G G+LGLG + K +P +V L G Q A G +VAV T
Sbjct: 4146 SAVVTADGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTVAVST 4203
Query: 194 GGGKVLSWGAGGSGRLGHG--------QESSIL---GFLRST--SEYTPRLIKELEGV-- 238
G V ++G G G+LG G Q+ IL G + ++++ L K+
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 239 -KVKIAAAGFLHSACIDENG--RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN 295
+V G + N +V + ++ + H +L S G++Y WGSN
Sbjct: 4264 GQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVG-AEHTL--ALSSTGDVYAWGSN 4320
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G LG+G + + P + + Q+S G H+AA
Sbjct: 4321 SEGQLGLGHTNHVREPTLIT-VLQGKNIRQISAGRCHSAA 4359
Score = 222 (83.2 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 84/297 (28%), Positives = 136/297 (45%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDGS 423
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 484 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLI---------SGGELYT----------W--GSNENGCL 300
+G+ ++ + N P+L+ S G +T W G +NG L
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 356
G G + ++ P+ ++ + +V G + + A+ S G++ WG G G S +
Sbjct: 595 GHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Score = 208 (78.3 bits), Expect = 8.7e-16, Sum P(3) = 8.7e-16
Identities = 55/163 (33%), Positives = 78/163 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 198 (74.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 78/304 (25%), Positives = 126/304 (41%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 4029 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 4085
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------- 286
+ G HS + E+G V+ +GD K+ + RRP I
Sbjct: 4086 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSC 4141
Query: 287 -----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G+L+T+G+ + G LG+G+ PERV + QV+CG HT A
Sbjct: 4142 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVA 4200
Query: 336 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+S + W +G DG G+LG GN P V+ + +V+CG
Sbjct: 4201 VSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQF 4250
Query: 396 TGAL 399
+ AL
Sbjct: 4251 SVAL 4254
Score = 177 (67.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 64/254 (25%), Positives = 112/254 (44%)
Query: 92 VYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
VY G GQL N+ + P+ + Q+ G + + I +G + G+
Sbjct: 3999 VYLWGAGRHGQLAEAGRNV---MVPVAAPSFS-QAQQVVCGQNCTFVIQANGTVLACGEG 4054
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSG 207
S G+LG G + + + T + L G Q + G + S+A+T G+V SWG G G
Sbjct: 4055 SYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG S + PR I+ L+G +V + GF HSA + +G+++ FG+
Sbjct: 4113 KLGHGN---------SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDY 4163
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
++ ++ + P ++ E Y G + C G+ + + + F + ++
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIG--QVAC-GLNHTVAVSTDGSMVWAFGDGDYGKLG 4220
Query: 328 CGWKHTAAISEGKI 341
G TA S K+
Sbjct: 4221 LG-NSTAKSSPQKV 4233
Score = 160 (61.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 74/276 (26%), Positives = 118/276 (42%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y+WG NS+ QL G + K++ P S T +A G + ++ G V + G
Sbjct: 373 EVYVWGSNSSHQLVEGTQE-KILQ-PKLAPSFSDAQTIEA--GQYCTFVISTDGSVRACG 428
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL------EGVKVKIAAAGFLHSACIDEN 256
G GRLG G ++ + T E R IK++ +G + G + S +
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFE-PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 257 GRVYIFGDRAVDKM--LFQ---EGN--------HARRPSLISGGELYTWGSNENGCLGIG 303
G++ G+ + K L Q +G + ++ GELYTWG + G LG G
Sbjct: 488 GKLG-HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ + P V+ S V +VSCG HT A+S+ W +GG G+
Sbjct: 547 DSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFGGG----------DNGK 593
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LGHG+ P ++ + + +V G + AL
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 90 (36.7 bits), Expect = 8.7e-16, Sum P(3) = 8.7e-16
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 282 SLISGGELYTWGSNENGCLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
+L G +YT+G + +G+ G + P++V S ++ ++ G +HT A+S
Sbjct: 4253 ALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVP-VLSGVFIEDIAVGAEHTLALSST 4311
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHT 396
G + WG +S GQLG G+ PT++ G+N++ Q+S G H+
Sbjct: 4312 GDVYAWG------------SNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHS 4357
Query: 397 GA 398
A
Sbjct: 4358 AA 4359
Score = 45 (20.9 bits), Expect = 4.2e-28, Sum P(2) = 4.2e-28
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 322 PVDQVSCG-WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
P+ +VS K I E G+ILT G GG + G +SG
Sbjct: 2029 PIQEVSFDPEKAQCCIVENGQILTHGSGGKGYGLASTGVTSG 2070
Score = 41 (19.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 314 VQGPFSESPVDQVSCGWKHTAAISEG 339
+QGP SP +Q + W T S+G
Sbjct: 1158 LQGP-PVSPEEQDTAYWLKTPLFSDG 1182
Score = 40 (19.1 bits), Expect = 8.7e-16, Sum P(3) = 8.7e-16
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ G++L+ G+GG G +G S+ G ++ ++KE G
Sbjct: 2044 IVENGQILTHGSGGKG---YGLAST--GVTSGCYQWKFYIVKENRG 2084
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 244 (91.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 84/289 (29%), Positives = 131/289 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 509 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYG 559
Query: 269 KMLFQEGN-HA--RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
++ GN HA + P+ + G +L+ E C G + VL S V
Sbjct: 560 QL----GNSHADGKTPNRVEG-KLHKSFVEEIAC-GAYHVAVLTSRTEV 602
Score = 235 (87.8 bits), Expect = 5.1e-28, Sum P(2) = 5.1e-28
Identities = 77/268 (28%), Positives = 124/268 (46%)
Query: 42 LWGNG-DYGRLGLG------SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGC 91
+WG G G LG G S + + ++ A E ++ +ACGG H + +T+ G
Sbjct: 269 IWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGE 328
Query: 92 VYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWG 148
++ G G+LG + NI +P I L ++ ++ G HS A+T+ G+LY WG
Sbjct: 329 SFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG 385
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
K G LG G + + +P L GI A G + VT G++ ++G G G
Sbjct: 386 KGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGV 444
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE------------N 256
LGHG + S+ + PR + L+G++ AA G H+A + E +
Sbjct: 445 LGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 495
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLI 284
G+++ +GD DK GN + P L+
Sbjct: 496 GKLFTWGDG--DKGRLGHGN--KEPKLV 519
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 61/164 (37%), Positives = 85/164 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G+ E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 501 WGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 103 LGISENIGYSLEPLRISG-LKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S G + P R+ G L K V+ I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 561 LGNSHADGKT--PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDV 618
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ PT VE L K A G + AV + W +G
Sbjct: 619 DDR--NSPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASG 656
Score = 214 (80.4 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 91/322 (28%), Positives = 136/322 (42%)
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN-SNGQLGLGKKAA------ 162
G ++ R+S + V S G H + G++++WG+ G LG G +
Sbjct: 235 GMGMDAFRVS-MSSAVSSSSHGSGHDDGDAL-GDVFIWGEGIGEGVLGGGNRRVGSSFDI 292
Query: 163 KVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K+ + P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 293 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI---- 348
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAV------------ 267
P+LI L +++ A G HS + +G +Y +G D V
Sbjct: 349 -----QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP 403
Query: 268 DKMLFQ-EGNH----ARRPS----LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
++ F EG H A P + S G+L+T+G G LG G + P V
Sbjct: 404 KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLK 463
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGG-SHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
V + +CG HTAA+ E + + S G G G+LGHGN + PT
Sbjct: 464 GLRTV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTC 522
Query: 378 VNFGENVKALQVSCGFNHTGAL 399
V QV+CG + T AL
Sbjct: 523 VAALVEPNFCQVACGHSLTVAL 544
Score = 205 (77.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 70/256 (27%), Positives = 111/256 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG GD+G LG G+ S W P V E + ++ACG HT +T G ++ G FG
Sbjct: 384 WGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFG 443
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITV------------DGELYMWG 148
LG + + P + LK V+ + G H++A+ G+L+ WG
Sbjct: 444 VLGHGDKKSVFI-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 502
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G K K++P T V L Q A G +VA+T G V + G+ G+
Sbjct: 503 DGDKGRLGHGNKEPKLVP--TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG+ ++ + +L K V+ A G H A + VY +G +
Sbjct: 561 LGNSHADG-----KTPNRVEGKLHKSF----VEEIACGAYHVAVLTSRTEVYTWGKGSNG 611
Query: 269 KMLFQEGNHARRPSLI 284
++ + + P+L+
Sbjct: 612 RLGHGDVDDRNSPTLV 627
Score = 169 (64.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 65/227 (28%), Positives = 100/227 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE------------TG 90
+G+G +G LG G +S + P + + ACG HT + E +G
Sbjct: 437 FGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG 496
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGK 149
++ G D G+LG N L P ++ L + Q++ G+ + A+T G +Y G
Sbjct: 497 KLFTWGDGDKGRLGHG-NKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS 555
Query: 150 NSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
GQLG K P +VE L F ++ A G +T +V +WG G +GR
Sbjct: 556 PVYGQLGNSHADGKT---PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGR 612
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSACI 253
LGHG R++ P L++ L+ +VK A G F + CI
Sbjct: 613 LGHGDVDD-----RNS----PTLVESLKDKQVKSIACGTNFTAAVCI 650
Score = 155 (59.6 bits), Expect = 5.1e-28, Sum P(2) = 5.1e-28
Identities = 41/124 (33%), Positives = 64/124 (51%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
H+ +L + G +YT GS G LG D +P RV+G +S V++++CG H A +
Sbjct: 538 HSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KTPNRVEGKLHKSFVEEIACGAYHVAVL 596
Query: 337 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
S ++ TWG G S G+LGHG+ D PT+V ++ + ++CG N
Sbjct: 597 TSRTEVYTWGKG------------SNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNF 644
Query: 396 TGAL 399
T A+
Sbjct: 645 TAAV 648
Score = 151 (58.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 41/117 (35%), Positives = 62/117 (52%)
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+LYTWG + G LG G+ +V H P+RV V ++CG HTA + S G++ T+
Sbjct: 379 GDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTF 437
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G GTF G LGHG+ P V+ + ++ ++ +CG HT A++E
Sbjct: 438 G----DGTF--------GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 323 (118.8 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 104/339 (30%), Positives = 160/339 (47%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+ + L+ P VC S+K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL-M 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA 266
S+ +P+ ++ LEG+ + AAG HS + +G V+ +G DR
Sbjct: 177 -----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231
Query: 267 ---------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
K+++ L G ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWG--GSHGT 352
S V Q++CG +HT A S G I +G G G GT
Sbjct: 291 LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGT 329
Score = 243 (90.6 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 82/274 (29%), Positives = 122/274 (44%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG----HGQESSI-LGFLRSTS--------E 226
Q A G S A++ G V WG +G+LG +ES + LR+ E
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 227 YTPRLIKELEGVKVKIAAAGFL-HSACIDE-NGR--VYIFGDRAVDKMLFQEGNHARRPS 282
+T L K + G L H + DE N R + + G ++ A PS
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 312
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G +Y +G G LG G + P V+G
Sbjct: 313 ---SGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
Score = 178 (67.7 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 76/280 (27%), Positives = 116/280 (41%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGH +E + P I L + A G HS + + G+++ +G
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 264 D---------------RAVDKMLFQE------GN-HARRPSLISGGELYTWGSNENGCLG 301
D R + K+ Q GN H +L + G+ +TWG N +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL--ALAADGQFFTWGKNSHGQLG 170
Query: 302 IGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 359
+G SP+RV+ P+ QV+ G H+ A+S G + +GWG +
Sbjct: 171 LGKEYPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAV--FGWG----------MN 217
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ GQLG ++ D P V K + +SCG HT L
Sbjct: 218 NAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 173 (66.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 323 (118.8 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 104/339 (30%), Positives = 161/339 (47%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+ + L+ P VC S+K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + ++ ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-M 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA 266
F S+ +P+ ++ LEG+ + AAG HS + +G V+ +G DR
Sbjct: 175 F---PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 267 ---------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
K+++ L G ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWG--GSHGT 352
S V Q++CG +HT A S G I +G G G GT
Sbjct: 291 LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 241 (89.9 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 81/274 (29%), Positives = 120/274 (43%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI-----LGFLRSTS--------E 226
Q A G S A++ G V WG +G+LG E + LR+ E
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 227 YTPRLIKELEGVKVKIAAAGFL-HSACIDE-NGR--VYIFGDRAVDKMLFQEGNHARRPS 282
+T L K + G L H + DE N R + + G ++ A PS
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 312
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G +Y +G G LG G + P V+G
Sbjct: 313 ---SGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 178 (67.7 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 76/280 (27%), Positives = 116/280 (41%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGH +E + P I L + A G HS + + G+++ +G
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 264 D---------------RAVDKMLFQE------GN-HARRPSLISGGELYTWGSNENGCLG 301
D R + K+ Q GN H +L + G+ +TWG N +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL--ALAADGQFFTWGKNSHGQLG 170
Query: 302 IGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 359
+G SP+RV+ P+ QV+ G H+ A+S G + +GWG +
Sbjct: 171 LGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAV--FGWG----------MN 217
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ GQLG ++ D P V K + +SCG HT L
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 169 (64.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 42/130 (32%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 323 (118.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 108/335 (32%), Positives = 163/335 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLIS------------G----------GELYTWGSNENGCLGIG-SIDVLHSPER 313
A RP LI G E+Y WG+N G G G S + P++
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 314 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
V G + Q+S G H TA + +++ W
Sbjct: 712 VSG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 262 (97.3 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 99/385 (25%), Positives = 165/385 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
S S P L+K++ V + G H+ + ++GR V+ FG K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 599
Query: 276 NHARRPSLI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPER 313
N +P +I S G++Y WG CLG GS + +
Sbjct: 600 NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPK 657
Query: 314 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
+ + + + +S G H ++S + ++ WG ++S GQ G GN
Sbjct: 658 LIEELAATRIVDISIGDSHCLSLSHDNEVYAWG------------NNSMGQCGQGNSTGP 705
Query: 373 I-HPTIVNFGENVKALQVSCGFNHT 396
I P V+ + + Q+S G +H+
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 222 (83.2 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 84/297 (28%), Positives = 136/297 (45%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDGS 423
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 484 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLI---------SGGELYT----------W--GSNENGCL 300
+G+ ++ + N P+L+ S G +T W G +NG L
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 356
G G + ++ P+ ++ + +V G + + A+ S G++ WG G G S +
Sbjct: 595 GHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Score = 206 (77.6 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 55/163 (33%), Positives = 78/163 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 160 (61.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 74/276 (26%), Positives = 118/276 (42%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y+WG NS+ QL G + K++ P S T +A G + ++ G V + G
Sbjct: 373 EVYVWGSNSSHQLVEGTQE-KILQ-PKLAPSFSDAQTIEA--GQYCTFVISTDGSVRACG 428
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL------EGVKVKIAAAGFLHSACIDEN 256
G GRLG G ++ + T E R IK++ +G + G + S +
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFE-PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 257 GRVYIFGDRAVDKM--LFQ---EGN--------HARRPSLISGGELYTWGSNENGCLGIG 303
G++ G+ + K L Q +G + ++ GELYTWG + G LG G
Sbjct: 488 GKLG-HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ + P V+ S V +VSCG HT A+S+ W +GG G+
Sbjct: 547 DSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFGGG----------DNGK 593
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LGHG+ P ++ + + +V G + AL
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 318 (117.0 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 103/339 (30%), Positives = 160/339 (47%)
Query: 43 WGNGDYGRLGLG-SLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+ +L+ P VC S+K +ACGG H++FL E G VY G+N
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-M 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA 266
F S+ +P+ ++ LEG+ + AG HS + +G V+ +G DR
Sbjct: 175 F---PSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 267 ---------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
K+++ L G ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWG--GSHGT 352
S V Q++CG +HT A S G I +G G G GT
Sbjct: 291 LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 232 (86.7 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 79/274 (28%), Positives = 119/274 (43%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WG+NS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI-----LGFLRSTS--------E 226
Q G S A++ G V WG +G+LG E + LR+ E
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 227 YTPRLIKELEGVKVKIAAAGFL-HSACIDE-NGR--VYIFGDRAVDKMLFQEGNHARRPS 282
+T L K + G L H + DE N R + + G ++ A PS
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 312
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G +Y +G G LG G + P V+G
Sbjct: 313 ---SGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 176 (67.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 76/280 (27%), Positives = 115/280 (41%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGH +E + P I L + A G HS + + G+++ +G
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112
Query: 264 D---------------RAVDKMLFQE------GN-HARRPSLISGGELYTWGSNENGCLG 301
D R + K+ Q GN H +L + G+ +TWG N +G LG
Sbjct: 113 DGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCL--ALAADGQFFTWGRNSHGQLG 170
Query: 302 IGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 359
+G SP+RV+ P+ QV G H+ A+S G + +GWG +
Sbjct: 171 LGKEFPSQASPQRVRS-LEGIPLAQVVAGGAHSFALSLSGAV--FGWG----------MN 217
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ GQLG ++ D P V K + +SCG HT L
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 169 (64.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 42/130 (32%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 239 (89.2 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 76/232 (32%), Positives = 111/232 (47%)
Query: 40 AAL--WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATG 96
AAL WG YG+LGLG E P + F K S++ + GG H+ +T+ G ++ G
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 74
Query: 97 LNDFGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LN GQLG+ +E+I Y + G + Q++ G+ + +T +G++ G NS GQ
Sbjct: 75 LNKDGQLGLGHTEDIPYFTPCKSLFGCP--IQQVACGWDFTIMLTENGQVLSCGSNSFGQ 132
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGH 211
LG+ + + +P +E AA G +VA T G V WG G GR L
Sbjct: 133 LGVPHGPRRCV-VPQAIELHKEKVVCIAA-GLRHAVAATASGIVFQWGTGLASCGRRLCP 190
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
GQ L + E P + LE K AG HSA + + G VY++G
Sbjct: 191 GQT---LPLFFTAKE--PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWG 237
Score = 198 (74.8 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 65/229 (28%), Positives = 103/229 (44%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
N D G+LGLG E C + ++ +ACG T+ LTE G V + G N FGQLG
Sbjct: 76 NKD-GQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLG 134
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-- 162
+ + P I K++VV I+ G H+ A T G ++ WG G G++
Sbjct: 135 VPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWG---TGLASCGRRLCPG 191
Query: 163 KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ +P+ P++V L G + S ++T G+V WG+ HGQ ++
Sbjct: 192 QTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK-----HGQLAN 246
Query: 217 ILGFLRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
FL P+ I+ + KV +G+ H E G+++ +G
Sbjct: 247 EAAFLP-----VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG 290
Score = 195 (73.7 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 60/183 (32%), Positives = 95/183 (51%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 126 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 183
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 184 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 243
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
L +AA +P+P K+E K A+ G+ VA T GK+ +WG G+LG
Sbjct: 244 LA--NEAA-FLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 300
Query: 213 QES 215
E+
Sbjct: 301 LET 303
Score = 122 (48.0 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 40/136 (29%), Positives = 57/136 (41%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A L+ WG NS GQLGLG K ++P C ++ G S VT
Sbjct: 8 SEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRS-VRRITGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG LG +TP K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLG-------LGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKM 270
ENG+V G + ++
Sbjct: 118 ENGQVLSCGSNSFGQL 133
Score = 115 (45.5 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-G 339
SL GE+Y WGSN++G L L P++++ F V + GW H A +E G
Sbjct: 226 SLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETG 284
Query: 340 KILTWG 345
K+ TWG
Sbjct: 285 KMFTWG 290
Score = 78 (32.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 37/128 (28%), Positives = 56/128 (43%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSC---GWKHT-AAIS 337
L G++ + GSN G LG+ H P R P + E ++V C G +H AA +
Sbjct: 116 LTENGQVLSCGSNSFGQLGVP-----HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATA 170
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI----HPTIVNFGENVKALQVSCGF 393
G + WG G + S G +L G + P+ V EN KA+ V G
Sbjct: 171 SGIVFQWGTGLA---------SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 221
Query: 394 NHTGALLE 401
+H+ +L +
Sbjct: 222 DHSASLTD 229
Score = 44 (20.5 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 287 GELYTWGSNENGCLG 301
G+++TWG + G LG
Sbjct: 284 GKMFTWGRADYGQLG 298
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 315 (115.9 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 104/339 (30%), Positives = 165/339 (48%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS L+ P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E+ G +P + L + +V ++ G HS A++ G+++ WG S+GQLGL
Sbjct: 64 GQLG-HESEGS--KPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN-- 276
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ L E +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 277 ---HAR-----RPSLISGGE-----------LYTWGSNENGCLGIGSIDVLHSPERVQGP 317
H + + IS GE ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWG--GSHGT 352
S V Q++CG HT A S G I +G G G GT
Sbjct: 291 LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGT 329
Score = 261 (96.9 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 88/292 (30%), Positives = 131/292 (44%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG S S+ P + +ACG +H++ L++ G V++ G GQLG++
Sbjct: 64 GQLGHESEGSK--PAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI 121
Query: 109 IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
P I L ++ ++QIS G H A+ DG+ + WG+NS GQLGLGK+
Sbjct: 122 EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS- 180
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +V+ L GI Q A G S A++ G V WG SG+LG E
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD---------RE 231
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------D--------RAVDKM 270
+P +K L KV + G H+A + ++G V+ FG D R V ++
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 271 LFQE------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ E G H + S G +Y +G G LG G + P V+G
Sbjct: 292 MGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
Score = 253 (94.1 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 93/331 (28%), Positives = 150/331 (45%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + FGQ GI N+ + ++ G + V +++ G +HS + DGE+Y G N+ G
Sbjct: 5 GYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + +K P V L+G A G SVA++ G+V SWGAG G+LG
Sbjct: 65 QLGHESEGSK----PAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-- 118
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
++I + PRLIK+L + + G H + +G+ + +G + ++ L
Sbjct: 119 -TTI-----EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Query: 273 QEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHS 310
+E P + G ++ WG N +G LG+ S
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P V+ S+ V +SCG +HTA +++ G + T+G G S GQLGH +
Sbjct: 233 PCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
D ++P V + Q++CG +HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310
Score = 206 (77.6 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 82/280 (29%), Positives = 119/280 (42%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG +S GQ G+G +IP P + K+ A G SV + G+V + G
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGH E S P + L G + A G HS + + G+V+ +G
Sbjct: 64 GQLGHESEGS-----------KPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112
Query: 264 ---------DRAVD-----KMLFQE-------GN-HARRPSLISGGELYTWGSNENGCLG 301
+ AV K L Q+ GN H +L + G+ +TWG N G LG
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCL--ALAADGQFFTWGQNSYGQLG 170
Query: 302 IGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 359
+G SP+RV+ P+ QV+ G H+ A+S G + +GWG +
Sbjct: 171 LGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAV--FGWG----------KN 217
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
S GQLG ++ D P V + K + +SCG HT L
Sbjct: 218 SSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 247 (92.0 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
Identities = 77/232 (33%), Positives = 113/232 (48%)
Query: 40 AAL--WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATG 96
AAL WG YG+LGLG E S F K +K + GG H+ +T+ G ++ G
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 74
Query: 97 LNDFGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LN GQLG+ +E + Y P + S L + Q++ G+ + +T +G++ G NS GQ
Sbjct: 75 LNKDGQLGLGHTEEVLY-FTPCK-SLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQ 132
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGH 211
LG+ + + IP +E L AA G ++A T G V WG G SGR L
Sbjct: 133 LGVPHGPRRCV-IPQAIELLREKVVSIAA-GLRHALAATASGTVFQWGTGLASSGRRLCP 190
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
GQ + FL + P + LE + AG HSA + + G +Y++G
Sbjct: 191 GQTLPL--FLTAKE---PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWG 237
Score = 209 (78.6 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 62/224 (27%), Positives = 101/224 (45%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
N D G+LGLG E C + +++ +ACG T+ LTE G V + G N FGQLG
Sbjct: 76 NKD-GQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLG 134
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN--SNGQLGLGKKAA 162
+ + P I L+++VV I+ G H+ A T G ++ WG S+G+ +
Sbjct: 135 VPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTL 194
Query: 163 KVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + ++G+ QA G + S ++T G++ WG+ HGQ +S
Sbjct: 195 PLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNK-----HGQLASQAA 249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
FL R + K+ +G+ H G+V+ +G
Sbjct: 250 FLLLPQRIEARCF---QNEKIAAVWSGWTHLVAQTVTGKVFTWG 290
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/175 (28%), Positives = 77/175 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + E + G H+ LT+ G +Y G N GQL + + L P RI
Sbjct: 203 PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQL--ASQAAFLLLPQRIEAR 260
Query: 122 ---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAKVIP------ 166
+++ + +G+ H A TV G+++ WG+ GQLG G ++ K P
Sbjct: 261 CFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSG 320
Query: 167 ----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P+ + CL+G + + G E ++AV GG SWG G G G E+ +
Sbjct: 321 PQKGTPSCLPCLTG--ATEISCGSEHNLAVIGG-VCHSWGWNEHGMCGDGTEADV 372
Score = 136 (52.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 43/138 (31%), Positives = 59/138 (42%)
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H S A+ L+ WG NS GQLGLG K + C SG K+ G S V
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCI-KRITGGGGHSAVV 64
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G + G G+LG G +L F TP K L G ++ A G+ +
Sbjct: 65 TDEGSLFVCGLNKDGQLGLGHTEEVLYF-------TP--CKSLLGCAIQQVACGWDFTII 115
Query: 253 IDENGRVYIFGDRAVDKM 270
+ ENG+V G + ++
Sbjct: 116 LTENGQVLSCGSNSFGQL 133
Score = 116 (45.9 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAIS-EG 339
SL GELY WGSN++G L + +L P+R++ F + V GW H A + G
Sbjct: 226 SLTDAGELYVWGSNKHGQLASQAAFLL-LPQRIEARCFQNEKIAAVWSGWTHLVAQTVTG 284
Query: 340 KILTWG 345
K+ TWG
Sbjct: 285 KVFTWG 290
Score = 81 (33.6 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 34/130 (26%), Positives = 52/130 (40%)
Query: 287 GELYTWGSNENGCLG--IGSIDVLHSPERV-----QGPFSESP--------VDQVSCGWK 331
G+++TWG + G LG + + + S ++ GP +P ++SCG +
Sbjct: 284 GKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSE 343
Query: 332 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
H A+ G +WGW HG G G + D P V L V C
Sbjct: 344 HNLAVIGGVCHSWGWN-EHG-----------MCGDGTEADVWAPKPVPGLRFFLGLHVGC 391
Query: 392 GFNHTGALLE 401
G H+ AL +
Sbjct: 392 GAGHSLALCQ 401
Score = 79 (32.9 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 35/128 (27%), Positives = 55/128 (42%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS----ESPVDQVSCGWKHT-AAIS 337
L G++ + GSN G LG+ H P R P + V ++ G +H AA +
Sbjct: 116 LTENGQVLSCGSNSFGQLGVP-----HGPRRCVIPQAIELLREKVVSIAAGLRHALAATA 170
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI----HPTIVNFGENVKALQVSCGF 393
G + WG G + SSG +L G + P+ V EN +A+ V G
Sbjct: 171 SGTVFQWGTGLA---------SSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGS 221
Query: 394 NHTGALLE 401
+H+ +L +
Sbjct: 222 DHSASLTD 229
Score = 66 (28.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+ GG ++WG NE+G G G+ + +P+ V G + V CG H+ A+ +
Sbjct: 348 VIGGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGL-HVGCGAGHSLALCQ 401
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 314 (115.6 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 101/356 (28%), Positives = 173/356 (48%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+ +K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYMWG NS GQ+GLGK++ + P +V +F + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTP--QEVSVGKRVFW--VSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFG--------------DRAVDKML--FQEGN--HA----RRPSLI 284
H+ + EN VY FG + + +++ F++G HA +LI
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALI 311
Query: 285 S-GGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE 338
+ G LYT+G +G LG+G + + + P F + V V+CG H +++
Sbjct: 312 TDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367
Score = 219 (82.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 79/297 (26%), Positives = 139/297 (46%)
Query: 121 LKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
LK +V ++IS G H++ +T +G+L+M+G N+ GQLGLG K + PT V+ L
Sbjct: 33 LKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT--VNKPTCVKALKSERV 90
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF--LRSTSEYTP-RLIKELE 236
K A G ++ T G + + G G+LG G + F + ++ P +++
Sbjct: 91 KLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGS 150
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDR--------AVDKMLFQEGNHARRPSLIS-GG 287
+ G L+ + G++ + + +V K +F + ++ G
Sbjct: 151 NTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFVTVDG 210
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISEGKILTWG 345
LYT+G ++G LG+ S + L + +V ++ P V QV+CG HT A++E ++ ++G
Sbjct: 211 ALYTFGEKDSGKLGL-STEKLAN-HKVPQQVTDIPDRVVQVACGGGHTVALTENEVYSFG 268
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G F GQLGHG + + P +V + +CG NHT + +
Sbjct: 269 LG----QF--------GQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITD 313
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 303 (111.7 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 75/239 (31%), Positives = 119/239 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V+ I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G++ +WGA G+LG G +S+
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSN--- 296
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y ++ E + + ++IAA H SA + G VY++G ++ H
Sbjct: 297 -----QSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHTH 349
Score = 290 (107.1 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 73/224 (32%), Positives = 117/224 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G G LG+G ++S P + + +L+ G G H + T G V+ G N + Q
Sbjct: 71 GTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQ 130
Query: 103 LGISENIGYSLEPLRIS-GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P IS L K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 131 LG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 189
Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 190 ANQ--PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS------ 241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G++Y +G
Sbjct: 242 ---SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 216 (81.1 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 84/320 (26%), Positives = 136/320 (42%)
Query: 59 RWRPV--VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYS 112
+W P+ +CS E ++ AC G L+ T ++ G N G LG+ + I +
Sbjct: 30 KW-PIFSLCSEEELQLIRQ-ACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQST 86
Query: 113 LEPLRISGLK-KEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+EP R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 87 IEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
LS + A G S+ +T G+V +WG SG++G G + ++ PR
Sbjct: 147 TN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPR 196
Query: 231 LIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHAR--RPSLISG 286
+ L+ V A G + S + + G VY++G ++ L GN R + + G
Sbjct: 197 RVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 287 -------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
G++Y WG+N G LG G+ P V + ++ +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAA 315
Query: 328 CGWKHTAAISE--GKILTWG 345
C HT+A G + WG
Sbjct: 316 CHSAHTSAAKTQGGHVYMWG 335
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 43/115 (37%), Positives = 64/115 (55%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQ 154
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ 340
Score = 182 (69.1 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 78/290 (26%), Positives = 128/290 (44%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS---VAVTGG 195
TV+ E+++ G N +G LG+G + + P +++ L+G K A+L + V T
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + G + + L +V A G HS +
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNH--GLVPC------HISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------------------------SLISGGELY 290
+G V+ +G ++ G+ A +P +++ GE+Y
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVY 227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 349
WG N NG LG+GS +P RV V +V+CG+ HT ++ EG+I WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQIYAWG---- 282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS-CGFNHTGA 398
+S GQLG GN + +PT V E + ++++ C HT A
Sbjct: 283 --------ANSYGQLGTGNKSNQSYPTPVVV-EKDRIIEIAACHSAHTSA 323
Score = 138 (53.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 341
L S GE++ WG N +G +G GS P RV G V ++CG + A+ + G++
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEV 226
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
WG+ G+ GQLG G+ + P V + ++ +V+CG+ HT L +
Sbjct: 227 YVWGYNGN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 308 (113.5 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 76/244 (31%), Positives = 121/244 (49%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 53 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 112
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 113 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 172
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L ++ G
Sbjct: 173 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQL------ALSGNSA 225
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ + P
Sbjct: 226 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQ 285
Query: 283 LISG 286
LI G
Sbjct: 286 LIEG 289
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 95/304 (31%), Positives = 146/304 (48%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 31 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 88
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S+A
Sbjct: 89 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 147
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG HS
Sbjct: 148 LSEDGQVFSWGSNRQGQLGLGNNLC--------SQASPQKVKSLEGIPLAQVAAGGTHSF 199
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RP-SL----------ISGGELYTWGSNE 296
+ G + +G+ ++ GN A+ +P S+ IS G +T E
Sbjct: 200 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 258
Query: 297 NGCL----GIGSIDVLHSPERVQG-P-FSES---PVDQVSCGWKHTAAI--SEGKILTWG 345
+G + G S + HSP +G P E V Q+ CG HT A + G++++ G
Sbjct: 259 DGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 318
Query: 346 WGGS 349
G S
Sbjct: 319 RGPS 322
Score = 240 (89.5 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 86/313 (27%), Positives = 149/313 (47%)
Query: 114 EPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+P R+ +G ++++ ++G HS + + +Y G NS GQLG +K+ + P ++
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEPIQ 75
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + + G E SVAV G+V +WGAG G+LG G ES + F+ P I
Sbjct: 76 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFM-------PTKI 127
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSL---- 283
L G+K+ + G HS + E+G+V+ +G ++ L + + + SL
Sbjct: 128 NSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIP 187
Query: 284 ---ISGGELYT-----------WGSNENGCL---GIGSIDVLHSPERVQGPFSESPVDQV 326
++ G ++ WG+N +G L G + + ++ P + G V +
Sbjct: 188 LAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVVYI 246
Query: 327 SCGWKHTAAISE-GKILTWGWGGSHGTFSED-GHSSGGQLGHGNDVDYIHPTIVN-FGEN 383
SCG++HT+ ++E G++ T+G G+ SE HS + G G P ++ G +
Sbjct: 247 SCGYEHTSVLTEDGQVFTFG-----GSSSEQLQHSP--RSGRGG------PQLIEGIGGH 293
Query: 384 VKALQVSCGFNHT 396
V Q+ CG HT
Sbjct: 294 VS--QIECGSYHT 304
Score = 237 (88.5 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 65/224 (29%), Positives = 108/224 (48%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 104 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 163
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 164 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I P + L + + G+E + +T G+V ++G S +L H S G
Sbjct: 224 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 283
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I + A + G+V G
Sbjct: 284 ---------PQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 318
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 41/120 (34%), Positives = 60/120 (50%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L S +Y+ G N G LG S PE +Q S +D VSCG +H+ A+ +G++
Sbjct: 43 LFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQA-LSTVHIDLVSCGKEHSVAVCHQGRV 101
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
TWG GS G +G ++ ++ PT +N +K +QVSCG H+ AL E
Sbjct: 102 FTWG-AGSEGQLG---------IGESKEISFM-PTKINSLAGIKIIQVSCGHYHSLALSE 150
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 38/128 (29%), Positives = 66/128 (51%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
H +L G++++WGSN G LG+G+ + SP++V+ P+ QV+ G H+ A
Sbjct: 142 HYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFA 200
Query: 336 IS-EGKILTWGWGGSH-GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
+S G ++GWG + G + G+S+ Q+ Y P + + + + +SCG+
Sbjct: 201 LSLMGT--SFGWGNNRSGQLALSGNSAKEQI-------Y-KPHSIGALKTLNVVYISCGY 250
Query: 394 NHTGALLE 401
HT L E
Sbjct: 251 EHTSVLTE 258
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 287 GELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 344
G ++TWG+ G LGIG S ++ P ++ + + QVSCG H+ A+SE G++ +W
Sbjct: 99 GRVFTWGAGSEGQLGIGESKEISFMPTKINS-LAGIKIIQVSCGHYHSLALSEDGQVFSW 157
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G + GQLG GN++ P V E + QV+ G H+ AL
Sbjct: 158 G------------SNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFAL 201
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 301 (111.0 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 77/225 (34%), Positives = 117/225 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G +S+
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN--- 296
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
S TP + E + + ++IAA H SA + G VY++G
Sbjct: 297 ----QSYPTPVTV-EKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 282 (104.3 bits), Expect = 9.7e-23, P = 9.7e-23
Identities = 73/224 (32%), Positives = 114/224 (50%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G G LGLG ++S P + + L+ G G H + T G V+ G N + Q
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 130
Query: 103 LGISENIGYSLEPLRIS-GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P IS L K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 131 LG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 189
Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 190 VNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN------ 241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 242 ---SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 205 (77.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 87/341 (25%), Positives = 144/341 (42%)
Query: 45 NGDYGR---LGLGSLE----SRWRPV--VCSAFEKHSLKALAC----GGAHTLFLTETGC 91
+GD G+ L SL+ +W P+ +CS E ++ AC G L+ T
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKW-PIFSLCSEEELQLIRQ-ACVFGSAGNEVLYTTVNDE 66
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH-HSSAITVDGELYMWGK 149
++ G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG
Sbjct: 67 IFVLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGH 125
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N+ QLG G ++P LS + A G S+ +T G+V +WG SG++
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184
Query: 210 GHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
G G + ++ PR + L+ V A G + + + G VY++G
Sbjct: 185 GSGS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235
Query: 269 KM-LFQEGNHAR--RPSLISG-------------------GELYTWGSNENGCLGIGSID 306
++ L GN R + + G G++Y WG+N G LG G+
Sbjct: 236 QLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
P V + ++ +C HT+A G + WG
Sbjct: 296 NQSYPTPVTVE-KDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 47/139 (33%), Positives = 73/139 (52%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 76/290 (26%), Positives = 125/290 (43%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS---VAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + G + + L +V A G HS +
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNH--GLVPC------HISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------------------------SLISGGELY 290
+G V+ +G ++ G+ +P +++ GE+Y
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVY 227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 349
WG N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQVYAWG---- 282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS-CGFNHTGA 398
+S GQLG GN + +PT V E + ++++ C HT A
Sbjct: 283 --------ANSYGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHTSA 323
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 341
L S GE++ WG N +G +G GS P RV G V ++CG A+ + G++
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEV 226
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
WG+ G+ GQLG GN + P V + ++ +V+CG+ HT L +
Sbjct: 227 YVWGYNGN------------GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 304 (112.1 bits), Expect = 8.2e-26, P = 8.2e-26
Identities = 82/250 (32%), Positives = 123/250 (49%)
Query: 46 GDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--------ACGGAHTLFLTETGCVYATGL 97
GD GR G L R P CSA K ++AL +CG H+L + G V+A G
Sbjct: 48 GDNGR---GQLGQRGAP--CSAQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGA 102
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLG E +L P++I L ++ Q+S G++HS A++ G+++ WG NS+GQLG
Sbjct: 103 GSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLG 162
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LGKK P +V L GI Q A G S A++ G WG +G+L +++
Sbjct: 163 LGKKFPSQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLAL-HKNN 220
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ G Y P I L+ + V + G+ H+ + +NG+V+ FGD ++
Sbjct: 221 VSG-----QSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTA 275
Query: 277 HARRPSLISG 286
P L+ G
Sbjct: 276 EKSGPQLVEG 285
Score = 258 (95.9 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 68/230 (29%), Positives = 110/230 (47%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG G E+ P+ +K ++CG H+L L+E G V++
Sbjct: 96 RVFA--WGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSW 153
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L + Q++ G HS A+++ G + WG+N+ GQ
Sbjct: 154 GSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQ 213
Query: 155 LGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L K P + L + + G+E +V +T GKV ++G G+LGH
Sbjct: 214 LALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSP 273
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 274 TAEKSG---------PQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 314
Score = 252 (93.8 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 89/289 (30%), Positives = 137/289 (47%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKK-EVVQIST 130
L+ A G H+L L G V++ G N GQLG S + RI L+ V +S
Sbjct: 25 LRQAASGERHSLLLLSNGQVHSCGDNGRGQLG-QRGAPCSAQLKERIRALETLHVDLVSC 83
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-KAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG G+ K +IP+ K++ L+ I KQ + G S
Sbjct: 84 GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPM--KIKTLNDIKIKQVSCGHYHS 141
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A++ GG+V SWG+ G+LG G++ F S+ +P+ ++ L+G+ + AAG H
Sbjct: 142 LALSEGGQVFSWGSNSDGQLGLGKK-----F---PSQASPQRVRSLDGIPLAQVAAGGAH 193
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISG----GELY-------TWGSN 295
S + +G + +G ++ + N + +P IS G +Y T
Sbjct: 194 SFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLT 253
Query: 296 ENG---CLGIGSIDVL-HSPERVQ-GPFSESPVD----QVSCGWKHTAA 335
+NG G + L HSP + GP +D Q+ CG HT A
Sbjct: 254 QNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYHTLA 302
Score = 216 (81.1 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 85/310 (27%), Positives = 137/310 (44%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + +G+++ G N GQLG + A + ++ L + +
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQ-RGAPCSAQLKERIRALETLHVDLVS 82
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ + T+ P IK L +K+K
Sbjct: 83 CGKEHSLAVCHKGRVFAWGAGSEGQLGTGE-------FKETN-LIPMKIKTLNDIKIKQV 134
Query: 244 AAGFLHSACIDENGRVYIFGD---------------------RAVDKMLFQE----GNHA 278
+ G HS + E G+V+ +G R++D + + G H+
Sbjct: 135 SCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHS 194
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHT 333
SL G + WG N G L + +V S + + P+S S + +SCG++HT
Sbjct: 195 FALSL--SGTSFGWGRNNAGQLALHKNNV--SGQSYK-PYSISALKNLGVIYISCGYEHT 249
Query: 334 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
+++ G TF G ++ GQLGH + P +V G + Q+ CG
Sbjct: 250 VVLTQN--------GKVFTF---GDNTYGQLGHSPTAEKSGPQLVE-GIDGLVSQIDCGS 297
Query: 394 NHTGALLEYV 403
HT L YV
Sbjct: 298 YHT---LAYV 304
Score = 186 (70.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 72/263 (27%), Positives = 118/263 (44%)
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P+ + L G+ +QAA G S+ + G+V S G G G+LG Q + S
Sbjct: 12 PVSRRRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLG--QRGA------PCS 63
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGN------ 276
I+ LE + V + + G HS + GRV+ +G + ++ F+E N
Sbjct: 64 AQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKI 123
Query: 277 --------------HARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSES 321
H +L GG++++WGSN +G LG+G SP+RV+
Sbjct: 124 KTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS-LDGI 182
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDVD--YIHPTIV 378
P+ QV+ G H+ A+S ++GWG ++ GQL H N+V P +
Sbjct: 183 PLAQVAAGGAHSFALSLSGT-SFGWG----------RNNAGQLALHKNNVSGQSYKPYSI 231
Query: 379 NFGENVKALQVSCGFNHTGALLE 401
+ +N+ + +SCG+ HT L +
Sbjct: 232 SALKNLGVIYISCGYEHTVVLTQ 254
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 239 (89.2 bits), Expect = 8.6e-26, Sum P(2) = 8.6e-26
Identities = 76/232 (32%), Positives = 111/232 (47%)
Query: 40 AAL--WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATG 96
AAL WG YG+LGLG E P + F K S++ + GG H+ +T+ G ++ G
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 74
Query: 97 LNDFGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LN GQLG+ +E+I Y + G + Q++ G+ + +T +G++ G NS GQ
Sbjct: 75 LNKDGQLGLGHTEDIPYFTPCKSLFGCP--IQQVACGWDFTIMLTENGQVLSCGSNSFGQ 132
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGH 211
LG+ + + +P +E AA G +VA T G V WG G GR L
Sbjct: 133 LGVPHGPRRCV-VPQAIELHKEKVVCIAA-GLRHAVAATASGIVFQWGTGLASCGRRLCP 190
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
GQ L + E P + LE K AG HSA + + G VY++G
Sbjct: 191 GQT---LPLFFTAKE--PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWG 237
Score = 198 (74.8 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 65/229 (28%), Positives = 103/229 (44%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
N D G+LGLG E C + ++ +ACG T+ LTE G V + G N FGQLG
Sbjct: 76 NKD-GQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLG 134
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-- 162
+ + P I K++VV I+ G H+ A T G ++ WG G G++
Sbjct: 135 VPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWG---TGLASCGRRLCPG 191
Query: 163 KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ +P+ P++V L G + S ++T G+V WG+ HGQ ++
Sbjct: 192 QTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK-----HGQLAN 246
Query: 217 ILGFLRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
FL P+ I+ + KV +G+ H E G+++ +G
Sbjct: 247 EAAFLP-----VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG 290
Score = 195 (73.7 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 60/183 (32%), Positives = 95/183 (51%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 126 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 183
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 184 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 243
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
L +AA +P+P K+E K A+ G+ VA T GK+ +WG G+LG
Sbjct: 244 LA--NEAA-FLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 300
Query: 213 QES 215
E+
Sbjct: 301 LET 303
Score = 143 (55.4 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 49/175 (28%), Positives = 76/175 (43%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG- 120
P + E + G H+ LT+ G VY G N GQL + + P +I
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL--ANEAAFLPVPQKIEAH 260
Query: 121 --LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAK---VIP--- 166
++V I +G+ H A T G+++ WG+ GQLG G K K +P
Sbjct: 261 CFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSR 320
Query: 167 ----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+P+ CL+G + + G E ++A+ GG SWG G G G E+++
Sbjct: 321 PPNSMPSSPHCLTG--ATEVSCGSEHNLAIIGG-VCYSWGWNEHGMCGDGTEANV 372
Score = 122 (48.0 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 40/136 (29%), Positives = 57/136 (41%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A L+ WG NS GQLGLG K ++P C ++ G S VT
Sbjct: 8 SEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRS-VRRITGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG LG +TP K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLG-------LGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKM 270
ENG+V G + ++
Sbjct: 118 ENGQVLSCGSNSFGQL 133
Score = 115 (45.5 bits), Expect = 8.6e-26, Sum P(2) = 8.6e-26
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-G 339
SL GE+Y WGSN++G L L P++++ F V + GW H A +E G
Sbjct: 226 SLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETG 284
Query: 340 KILTWG 345
K+ TWG
Sbjct: 285 KMFTWG 290
Score = 88 (36.0 bits), Expect = 5.7e-23, Sum P(2) = 5.7e-23
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
I GG Y+WG NE+G G G+ + +P+ VQ S S + V CG H+ A+ +
Sbjct: 348 IIGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGL-LVGCGAGHSLALCQ 401
Score = 82 (33.9 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 35/130 (26%), Positives = 48/130 (36%)
Query: 287 GELYTWGSNENGCLG----------IGSIDVLHSPERVQGPFSESP-----VDQVSCGWK 331
G+++TWG + G LG + D R SP +VSCG +
Sbjct: 284 GKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSE 343
Query: 332 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
H AI G +WGW HG G G + + P V + L V C
Sbjct: 344 HNLAIIGGVCYSWGWN-EHG-----------MCGDGTEANVWAPKPVQALLSSSGLLVGC 391
Query: 392 GFNHTGALLE 401
G H+ AL +
Sbjct: 392 GAGHSLALCQ 401
Score = 78 (32.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 37/128 (28%), Positives = 56/128 (43%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSC---GWKHT-AAIS 337
L G++ + GSN G LG+ H P R P + E ++V C G +H AA +
Sbjct: 116 LTENGQVLSCGSNSFGQLGVP-----HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATA 170
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI----HPTIVNFGENVKALQVSCGF 393
G + WG G + S G +L G + P+ V EN KA+ V G
Sbjct: 171 SGIVFQWGTGLA---------SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 221
Query: 394 NHTGALLE 401
+H+ +L +
Sbjct: 222 DHSASLTD 229
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 76/245 (31%), Positives = 122/245 (49%)
Query: 44 GNGDYGRLGLGSLESRWRPVV-CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQ
Sbjct: 53 GDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQ 112
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 113 LGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNL 172
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 173 CSQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA----- 226
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++ Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ + P
Sbjct: 227 KAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGP 286
Query: 282 SLISG 286
LI G
Sbjct: 287 QLIEG 291
Score = 246 (91.7 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 92/291 (31%), Positives = 141/291 (48%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGIS--ENIGYSLEPLR-ISGLKKEVVQIS 129
LKA A G H+L L VY+ G N GQLG ++ EP++ +S + ++V S
Sbjct: 31 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLV--S 87
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S
Sbjct: 88 CGKEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHS 146
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG H
Sbjct: 147 LALSEDGQVFSWGSNRQGQLGLGNNLC--------SQASPQKVKSLEGIPLAQVAAGGTH 198
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR-----RP-SL----------ISGGELYTWG 293
S + G + +G+ ++ GN A+ +P S+ IS G +T
Sbjct: 199 SFALSLMGTSFGWGNNRSGQLALS-GNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSV 257
Query: 294 SNENGCL----GIGSIDVLHSPERVQG-P-FSES---PVDQVSCGWKHTAA 335
E+G + G S + HSP +G P E V Q+ CG HT A
Sbjct: 258 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIA 308
Score = 237 (88.5 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 65/225 (28%), Positives = 108/225 (48%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 105 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 164
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L
Sbjct: 165 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 224
Query: 161 AAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+AK I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 225 SAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRG 284
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+LI+ + G +I + A + G+V G
Sbjct: 285 G---------PQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 320
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 80/309 (25%), Positives = 137/309 (44%)
Query: 114 EPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK-V 171
+P R+ +G ++++ ++G HS + + +Y G NS GQLG +K+ + P + +
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEEPI 75
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ LS + + G E SVAV G+V +WGAG G+LG G ES + F+ P
Sbjct: 76 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFM-------PTK 127
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSL--- 283
I L G+K+ + G HS + E+G+V+ +G ++ L + + + SL
Sbjct: 128 INSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI 187
Query: 284 ----ISGGELYT-----------WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
++ G ++ WG+N +G L + E++ P S + ++
Sbjct: 188 PLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA--KAEQIYKPHSIGALKTLNV 245
Query: 329 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKAL 387
+ + +LT G TF G SS QL H P ++ G +V
Sbjct: 246 VYI-SCGYEHTSVLTED--GQVFTF---GGSSSEQLQHSPRSGRGGPQLIEGIGGHVS-- 297
Query: 388 QVSCGFNHT 396
Q+ CG HT
Sbjct: 298 QIECGSYHT 306
Score = 151 (58.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 40/120 (33%), Positives = 58/120 (48%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L S +Y+ G N G LG S PE S +D VSCG +H+ A+ +G++
Sbjct: 43 LFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRV 102
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
TWG GS G +G ++ ++ PT +N +K +QVSCG H+ AL E
Sbjct: 103 FTWG-AGSEGQLG---------IGESKEISFM-PTKINSLAGIKIIQVSCGHYHSLALSE 151
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 287 GELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 344
G ++TWG+ G LGIG S ++ P ++ + + QVSCG H+ A+SE G++ +W
Sbjct: 100 GRVFTWGAGSEGQLGIGESKEISFMPTKINS-LAGIKIIQVSCGHYHSLALSEDGQVFSW 158
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G + GQLG GN++ P V E + QV+ G H+ AL
Sbjct: 159 G------------SNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFAL 202
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
H +L G++++WGSN G LG+G+ + SP++V+ P+ QV+ G H+ A
Sbjct: 143 HYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFA 201
Query: 336 IS-EGKILTWGWGGSH-GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
+S G ++GWG + G + G+S+ + P + + + + +SCG+
Sbjct: 202 LSLMGT--SFGWGNNRSGQLALSGNSAKAE-------QIYKPHSIGALKTLNVVYISCGY 252
Query: 394 NHTGALLE 401
HT L E
Sbjct: 253 EHTSVLTE 260
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 80/238 (33%), Positives = 115/238 (48%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGEL+ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
TP + L GV V G+ H+ + + G +Y +G ++ N+ P+ I
Sbjct: 223 -TPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI 279
Score = 291 (107.5 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 73/225 (32%), Positives = 118/225 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 210 (79.0 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 89/322 (27%), Positives = 138/322 (42%)
Query: 59 RWRPV--VCSAFEKHSL-KALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
+W P+ + S E S+ KA G + +++T++ V+ GLN LG +N +L
Sbjct: 6 KW-PIFTLLSPQETGSIRKACVFGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQS-TL 63
Query: 114 EPLRISGL-KKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
P ++ L K + +S G H T DG +Y WG N QLG G + PI
Sbjct: 64 VPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV-- 121
Query: 172 ECLSGIFTKQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
C + + KQ A G S+A+ G++ +WG G++G G + ++ T
Sbjct: 122 -C-TNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGS---------TANQPT 170
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN---------- 276
PR + L KV A G S + ++G VY +G ++ L GN
Sbjct: 171 PRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAAL 230
Query: 277 -----------HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
+A +L G LY WG+N G LG GS + L SP ++ E ++
Sbjct: 231 HGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEI 289
Query: 326 VSCGWKHTAAISE--GKILTWG 345
+C HT+A G + WG
Sbjct: 290 AACHSTHTSAAKTQGGHVYMWG 311
Score = 189 (71.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 48/138 (34%), Positives = 71/138 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 189 (71.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 84/315 (26%), Positives = 143/315 (45%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITV-DG-ELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
L P ++K V G S AI V D E++++G N + LG G + ++P K
Sbjct: 13 LSPQETGSIRKACV---FGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVP--KK 67
Query: 171 VECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+E L G K + G V + T G V +WG G +LG+G + + ++ T
Sbjct: 68 LEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TN 124
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------- 282
L+K++ V+V A G HS + +G ++ +G ++ G+ A +P+
Sbjct: 125 LLVKQV--VEV---ACGSHHSMALAADGELFAWGYNNCGQV--GSGSTANQPTPRKVTNC 177
Query: 283 ------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
++ GE+Y WG N NG LG+G+ +P RV V+
Sbjct: 178 LHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVC-VN 236
Query: 325 QVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
Q+ CG+ HT A+++ +L + WG + T+ GQLG G+ + + PT + E
Sbjct: 237 QIVCGYAHTLALTDEGLL-YAWGAN--TY--------GQLGTGSKNNLLSPTQIMV-EKE 284
Query: 385 KALQVS-CGFNHTGA 398
+ ++++ C HT A
Sbjct: 285 RVIEIAACHSTHTSA 299
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G+H +L + GEL+ WG N G +G GS +P +V V ++CG +
Sbjct: 136 GSH-HSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSM 194
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A+ + G++ WG+ G+ GQLG GN+ + + P V V Q+ CG+
Sbjct: 195 AVLDSGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHGVCVNQIVCGY 242
Query: 394 NHTGALLE 401
HT AL +
Sbjct: 243 AHTLALTD 250
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 301 (111.0 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 103/333 (30%), Positives = 157/333 (47%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG ++ + PL I L+ V+ QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLG--HDLP-TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 DK-EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ Y RL L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ---THCNYPLRLTTLL-GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239
Query: 280 RPSLIS------------GGELYTWGSNENGCL--GIGSIDVL-H---SPERVQGPFSE- 320
P+ + G E + +NE G G G+ L H S E + E
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMEL 299
Query: 321 --SPVDQVSCGWKHTAAI--SEGKILTWGWGGS 349
S + QV+CG +HT A+ S G++ +G G S
Sbjct: 300 MGSTITQVACGNRHTLALVPSRGRVYAFGLGSS 332
Score = 233 (87.1 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 83/291 (28%), Positives = 128/291 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L ++ RP++ + + + + CG H+L L++ G V + G ND GQL
Sbjct: 65 GSNDYSQLG-HDLPTK-RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQL 122
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+
Sbjct: 123 GHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPND 182
Query: 163 KV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES--SILG 219
P ++ L GI A G S ++ G V WG G+LG E+ S
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPT 242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV-YIFGDRAVDKMLFQE---- 274
L++ R + + V + G + + G++ + F + + E
Sbjct: 243 QLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGS 302
Query: 275 -------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
GN + S G +Y +G +G LG S L P+ V GP+
Sbjct: 303 TITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPW 353
Score = 200 (75.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 79/278 (28%), Positives = 121/278 (43%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQ------------------EGNHARRPSLISGGELYTWGSNEN 297
GD A DK + Q NH+ +L S GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSL--ALTSCGELYSWGSNIY 172
Query: 298 GCLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 354
G LG+ S D+ H P R+ P+ ++CG H+ IS+ + +GWG
Sbjct: 173 GQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGWG------- 223
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
++ GQLG ++ + +PT + + V+CG
Sbjct: 224 ---RNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258
Score = 193 (73.0 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 88/337 (26%), Positives = 136/337 (40%)
Query: 92 VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGK 149
+Y G GQLG+ L P +I VQ ++ G+ H+ +T G++Y G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N QLG + + IP L Q G S+A++ G+VLSWG G+L
Sbjct: 67 NDYSQLGHDLPTKRPLLIPE----LQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQL 122
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH + I+ P+++++L V A G HS + G +Y +G +
Sbjct: 123 GHATDKEIVQL--------PKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 174
Query: 270 MLFQEGN---HARRPS---------------------LIS-GGELYTWGSNENGCLGIGS 304
+ N H P LIS G ++ WG N G LG+
Sbjct: 175 LGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLND 234
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
P +++ V V+CG + + ++ EG + T G G++G Q
Sbjct: 235 ETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCG-AGAYG-----------Q 281
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
LGHG + + P +V QV+CG HT AL+
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 40/124 (32%), Positives = 68/124 (54%)
Query: 283 LISGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFS-ESPVDQVSCGWKHTAAISE- 338
+ SG ELY WGS +G LG+G I+ + +P ++ P++ ++ V QV+CG +HT ++
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQI--PWTPDTAVQQVACGHRHTLFLTAT 58
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ G S D +S QLGH D+ P ++ ++ +Q+ CG H+ A
Sbjct: 59 GKVYACG--------SND-YS---QLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLA 104
Query: 399 LLEY 402
L ++
Sbjct: 105 LSDW 108
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 300 (110.7 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 103/347 (29%), Positives = 165/347 (47%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + V +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL-KNVSNVC-VPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLG--LPNQLLGNHR-----TPQLVSEIPEKVIQVACGGE-H 254
Query: 250 SACIDENGRVYIFG-----DRAVDKMLFQ-------EGNHARRPSLISGGE--------- 288
+ + EN VY FG + LF+ E + S IS GE
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDI 313
Query: 289 --LYTWGSNENGCLGIGSIDVL-HSPERVQGPFSESPVDQVSCGWKH 332
+YT+G +G LG+G + H + F V V+CG H
Sbjct: 314 GLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Score = 235 (87.8 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 93/301 (30%), Positives = 141/301 (46%)
Query: 122 KKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
K +V V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K
Sbjct: 33 KNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVK 90
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESS---ILGFLRSTSEYTPRLIKEL 235
AA G ++ T GG V + G G+LG G +E + ++ F TSE+ + +
Sbjct: 91 LAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEHKIKQLSAG 148
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-SLIS-G------- 286
+ G L + G++ G + V + + +P S IS G
Sbjct: 149 SNTSAALTEDGRLFMWGDNSEGQI---GLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFV 205
Query: 287 ---GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISEGKI 341
GELY +G ENG LG+ + +L + R SE P V QV+CG +HT ++E +
Sbjct: 206 TTDGELYVFGEPENGKLGLPN-QLLGN-HRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALL 400
T+G G F GQLG G + + P ++ + +SCG NHT +
Sbjct: 264 YTFGLG----QF--------GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311
Query: 401 E 401
+
Sbjct: 312 D 312
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 287 (106.1 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 96/355 (27%), Positives = 158/355 (44%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+G+ G+LG+G+ E + W VV A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVV-EALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRG 68
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 69 TLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPL 128
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+G+ + I IP + C + +Q A G SV +T G V +WG
Sbjct: 129 KDEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPP------ 180
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
G ++ S P ++ LE V+ + A G H+ ++E+GR+ +G+ ++
Sbjct: 181 -----GDIKQIS--VPVRVQGLENVR--LIAVGAFHNLALEEDGRLLAWGNNEYGQLGTG 231
Query: 274 EGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHS- 310
+ P + G GE+Y WG E+G LG+G D
Sbjct: 232 DTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKM 291
Query: 311 -PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
P++V +E + QVSCG H+ A++ +G+I ++G G HG + GQ
Sbjct: 292 VPQKVN-LLAEEDIIQVSCGGTHSVALTRDGRIFSFG-RGDHGRLGYGRKVTTGQ 344
Score = 256 (95.2 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 96/333 (28%), Positives = 143/333 (42%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGEL 144
+T T + A G + GQLGI N + + L+ V+ + +G +S AI DG +
Sbjct: 2 VTATSII-AWGSGEDGQLGIGTNEEKEWACV-VEALEPYSVRSVVSGSRNSLAICDDGTM 59
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG N G LG + K IP++V+ L+ + QAA+G +AV G+ +WG
Sbjct: 60 FTWGWNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 205 GSGRLGHGQESSILGF-LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+ G +G +R R +L V+ AAG HS + G V+ +G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLT---VRQVAAGGTHSVVLTREGHVWTWG 175
Query: 264 D-------RAVDKMLFQEG-NHAR--------RPSLISGGELYTWGSNENGCLGIGSIDV 307
+ + + +G + R +L G L WG+NE G LG G
Sbjct: 176 QPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQP 235
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTFSEDGHSSGGQLGH 366
P VQG + VD + GW TA +G++ +GWG G HG LG
Sbjct: 236 TSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEV--YGWGRGEHGRLG---------LGD 284
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ + P VN +QVSCG H+ AL
Sbjct: 285 NDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVAL 317
Score = 235 (87.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 72/231 (31%), Positives = 105/231 (45%)
Query: 40 AALWGNGDYGRLGLGSLESRW-RPV----VCS--AFEKHSLKALACGGAHTLFLTETGCV 92
A WG +YG+ G L+ RPV V K +++ +A GG H++ LT G V
Sbjct: 112 AYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHV 171
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ +GQ +I P+R+ GL+ V I+ G H+ A+ DG L WG N
Sbjct: 172 WT-----WGQPWPPGDIKQISVPVRVQGLEN-VRLIAVGAFHNLALEEDGRLLAWGNNEY 225
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG G P+P V+ L + A G S A+T G+V WG G GRLG G
Sbjct: 226 GQLGTGDTQPTSHPVP--VQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLG 283
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+S+ P+ + L + + G HS + +GR++ FG
Sbjct: 284 DNDK-------SSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFG 327
Score = 229 (85.7 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 53/161 (32%), Positives = 88/161 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + PV + +L +A GG H+ LT+ G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ +N S + P +++ L +E ++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIPI--PTKVECLSGIF--TKQAALGFEQSVAVTGGGK 197
P+ P K+ G F T + G + ++ GG+
Sbjct: 340 VTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGR 380
Score = 168 (64.2 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 75/281 (26%), Positives = 114/281 (40%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG +GQLG+G K VE L + G S+A+ G + +WG
Sbjct: 10 WGSGEDGQLGIGTNEEK--EWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQR 67
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G LGH E+ +E P +K L VK+ AA G H +D+ GR Y +G
Sbjct: 68 GTLGHQPETK--------TENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 267 V----DKMLFQE-GNHARR---------PSL----ISGGELYTWGSNENGCLGI------ 302
++ L E G RR P L ++ G ++ G +
Sbjct: 120 YGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWP 179
Query: 303 -GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
G I + P RVQG E+ V ++ G H A+ E G++L WG ++
Sbjct: 180 PGDIKQISVPVRVQG--LEN-VRLIAVGAFHNLALEEDGRLLAWG------------NNE 224
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG G+ HP V +++ + ++ G H+ AL +
Sbjct: 225 YGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTD 265
Score = 128 (50.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 42/132 (31%), Positives = 66/132 (50%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAIS-E 338
+L GE+Y WG E+G LG+G D P++V +E + QVSCG H+ A++ +
Sbjct: 262 ALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN-LLAEEDIIQVSCGGTHSVALTRD 320
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY-IHPTIVNFG-----ENVK--ALQVS 390
G+I ++G G HG G+ G ++ I P +F E K A ++
Sbjct: 321 GRIFSFG-RGDHGRL---GYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIA 376
Query: 391 CGFNHTGALLEY 402
CG HT A++E+
Sbjct: 377 CGGRHTLAIVEW 388
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 298 (110.0 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 74/242 (30%), Positives = 122/242 (50%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LI 284
L+
Sbjct: 281 LV 282
Score = 282 (104.3 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 96/313 (30%), Positives = 148/313 (47%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
VC+ ++L A G H+L L G V + G N GQLG + +P RI L+
Sbjct: 18 VCAG--GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALET 74
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
V +S G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q
Sbjct: 75 LNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQV 133
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G SVA++ G+V SWG G+LG G+E F S+ +P+ ++ LEG+ +
Sbjct: 134 ACGHYHSVALSEDGQVFSWGTNSHGQLGLGKE-----F---PSQASPQRVRSLEGIPLAQ 185
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR----RP------------SLISG 286
AAG HS + +G + +G + ++ GN+A +P S+ G
Sbjct: 186 VAAGGHHSFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCG 244
Query: 287 ----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
G+++T+G N G LG P+ V+ E V Q+ CG HT A
Sbjct: 245 YKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAY 302
Query: 337 --SEGKILTWGWG 347
+ G+++++G G
Sbjct: 303 IYTTGQVVSFGRG 315
Score = 259 (96.2 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 90/305 (29%), Positives = 142/305 (46%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQE------------------------GNHAR 279
G HS + E+G+V+ +G + ++ L +E G+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSF 194
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDV---LHSPERVQGPFSESPVDQVSCGWKHTAAI 336
SL G + WGSN G L + + + P + G V +SCG+KHTA +
Sbjct: 195 ALSL--SGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVL 251
Query: 337 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
++ GK+ T+G D +S GQLGH + P +V E + + Q+ CG +H
Sbjct: 252 TQDGKVFTFG----------D--NSYGQLGHDPTAEKRGPQLVERIEGLVS-QIDCGSDH 298
Query: 396 TGALL 400
T A +
Sbjct: 299 TLAYI 303
Score = 257 (95.5 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 71/231 (30%), Positives = 112/231 (48%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G+LG+G E+ + P + +ACG H++ L+E G V++
Sbjct: 95 RVFA--WGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HHS A+++ G + WG NS GQ
Sbjct: 153 GTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L A V P + L + + G++ + +T GKV ++G G+LGH
Sbjct: 213 LALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
+ G P+L++ +EG+ +I G H+ A I G+V FG
Sbjct: 273 TAEKRG---------PQLVERIEGLVSQIDC-GSDHTLAYIYTTGQVVSFG 313
Score = 225 (84.3 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 69/201 (34%), Positives = 103/201 (51%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAG-G-SGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+G G G + R H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKEL 235
SS + L S + +K +
Sbjct: 329 SSDISCLVSAKDLADVQVKHI 349
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 70/263 (26%), Positives = 110/263 (41%)
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P+ + C G QAA G S+ + G V S G G+LG G R
Sbjct: 12 PLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRK------GTPRGEQ 65
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQE-------- 274
P I LE + V + + G HS + GRV+ +G + ++ F+E
Sbjct: 66 ---PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 275 ----G--------NHARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSES 321
G H +L G++++WG+N +G LG+G SP+RV+
Sbjct: 123 KTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGI 181
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGND--VDYIHPTIV 378
P+ QV+ G H+ A+S ++GWG + S GQL GN+ V P +
Sbjct: 182 PLAQVAAGGHHSFALSLSGT-SFGWGSN----------SAGQLALSGNNAPVQRYKPVSI 230
Query: 379 NFGENVKALQVSCGFNHTGALLE 401
+ + + +SCG+ HT L +
Sbjct: 231 GALKTLGVVSISCGYKHTAVLTQ 253
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 295 (108.9 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 77/225 (34%), Positives = 121/225 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P++ S + + ++CG H+L LT G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P ++S K +V I+ G S A+T +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G Q A G+ S+A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQLTPC--RLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ ++ E E + V+IAA H SA ++G+VY++G
Sbjct: 276 PVQ--------VMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 290 (107.1 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 83/219 (37%), Positives = 114/219 (52%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P L +L+ G G H L +TE G +YA G N + QLG + N
Sbjct: 54 LGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRIS-GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
G S P+ +S L+ K V ++S G HHS A+T +GE++ WG N+ GQ+G G A + P
Sbjct: 114 QGVS--PILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQ--P 169
Query: 167 IPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P KV CL A G S+AVT G+V WG G+G+LG G + L
Sbjct: 170 TPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQL------- 222
Query: 226 EYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
TP RLI L+G V A+G+ HS + + G +Y +G
Sbjct: 223 --TPCRLIA-LQGFCVLQIASGYAHSLALTDEGLLYAWG 258
Score = 239 (89.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 92/320 (28%), Positives = 139/320 (43%)
Query: 58 SRWRPV--VCSAFEKHSLKALACGGA---HTLFLTETGCVYATGLNDFGQLGISENIGYS 112
S+W P+ + SA E S++ GA +++T VY GLN LG ++ +
Sbjct: 5 SKW-PLFTLLSAQELSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQS-T 62
Query: 113 LEPLRISGLK-KEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+ P ++ L K+++ +S G H +T DGELY WG N QLG G V PI
Sbjct: 63 IAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVS 122
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L G + + G S+A+T G+V +WG G++G G + ++ TPR
Sbjct: 123 TN-LQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGS---------TANQPTPR 172
Query: 231 LIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN------------ 276
+ KV + A G S + +NG VY +G ++ L GN
Sbjct: 173 KVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQG 232
Query: 277 ---------HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
+A +L G LY WG+N G LG G+ SP +V E V+ +
Sbjct: 233 FCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTE-KERIVEIAA 291
Query: 328 CGWKHTAAIS--EGKILTWG 345
C HT+A G++ WG
Sbjct: 292 CHSTHTSAAKTQSGQVYMWG 311
Score = 180 (68.4 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 42/114 (36%), Positives = 65/114 (57%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P A + + +A G AH+L LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQ 154
LG N L P+++ K+ +V+I+ + H S+A T G++YMWG+ GQ
Sbjct: 265 LGTG-NKSNQLSPVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ-CRGQ 316
Score = 180 (68.4 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 77/289 (26%), Positives = 128/289 (44%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGG 196
IT D E+Y+ G N + LG G + + P K++CLSG + G V VT G
Sbjct: 37 ITHDDEVYVLGLNCSNCLGTGDSQSTIAP--KKLDCLSGKKLISLSYGSGPHVLLVTEDG 94
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDE 255
++ +WG G +LG+G + G +P L+ L+G +V + G HS +
Sbjct: 95 ELYAWGHNGYSQLGNGTTNQ--GV-------SPILVSTNLQGKRVTEVSCGSHHSLALTH 145
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPS-------------------------LISGGELY 290
G V+ +G ++ G+ A +P+ + GE+Y
Sbjct: 146 EGEVFAWGYNNCGQV--GSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVY 203
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 350
WG N NG LG+G+ +P R+ V Q++ G+ H+ A+++ +L + WG +
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRLIA-LQGFCVLQIASGYAHSLALTDEGLL-YAWGAN- 260
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS-CGFNHTGA 398
T+ GQLG GN + + P V E + ++++ C HT A
Sbjct: 261 -TY--------GQLGTGNKSNQLSPVQV-MTEKERIVEIAACHSTHTSA 299
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G+H +L GE++ WG N G +G GS +P +V + ++CG +
Sbjct: 136 GSH-HSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSM 194
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A+++ G++ WG+ G+ GQLG GN+ + + P + + LQ++ G+
Sbjct: 195 AVTDNGEVYGWGYNGN------------GQLGLGNNGNQLTPCRLIALQGFCVLQIASGY 242
Query: 394 NHTGALLE 401
H+ AL +
Sbjct: 243 AHSLALTD 250
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 247 (92.0 bits), Expect = 7.9e-25, Sum P(2) = 7.9e-25
Identities = 71/226 (31%), Positives = 113/226 (50%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG G S +P + S++ ++CG T+ +T+ G +Y+ G + +G L
Sbjct: 381 GSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCL 440
Query: 104 GISENIGYS-LEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G++++ G LEPL + E V Q+S G H A+T +Y WG G+LGL +
Sbjct: 441 GVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSED 500
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P KVE G+ G + S +T GKVL+ G +LG Q ++ +
Sbjct: 501 D--VYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINH 558
Query: 222 RSTSE--YTPRLI--KELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ E YT L K+L K++ + G H+A IDE GR+ FG
Sbjct: 559 EAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFG 604
Score = 186 (70.5 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 59/180 (32%), Positives = 84/180 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S + + P + + CG + LT TG V A GLN+ +
Sbjct: 486 WGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNK 545
Query: 103 LGISE-NIG------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ G + P S L K+ + IS G H++AI G L +G
Sbjct: 546 LGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGS 605
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E + A T + +WG GG+GRL
Sbjct: 606 NKCGQLGVGDYR-KHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRL 664
Score = 158 (60.7 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 53/192 (27%), Positives = 95/192 (49%)
Query: 43 WGNGDYGRLGLG-SLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+ YG LG+ S S P++ F + ++CG +H + LT + VY+ G ++
Sbjct: 432 FGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEY 491
Query: 101 GQLGI-SENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG+ SE+ YS + + + GL +V + G S +T+ G++ G N + +LGL
Sbjct: 492 GRLGLDSEDDVYSPQKVEVQRGLC--IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLN 549
Query: 159 KKAAKVI------PIP-----TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
+ A +I +P T + LS + + G + A+ G++L++G+ G
Sbjct: 550 QYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCG 609
Query: 208 RLGHGQESSILG 219
+LG G LG
Sbjct: 610 QLGVGDYRKHLG 621
Score = 144 (55.7 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 56/223 (25%), Positives = 89/223 (39%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G L + WR A + H +T ++ G G G
Sbjct: 333 VWGGGKTTPQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYT-WVNMQG-----GSKLHG 386
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + Y +P + L+ K V ++S G + IT +G+LY +G + G LG+ +
Sbjct: 387 QLGHGDRASYR-QPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQS 445
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P V+ Q + G +A+T V SWG G GRLG E +
Sbjct: 446 AGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDV--- 502
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
Y+P+ ++ G+ + G S + G+V G
Sbjct: 503 ------YSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACG 539
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE---NIGYSLEPLRISGLKKEVVQ 127
+ +++++ G HT + E G + G N GQLG+ + ++G +L + G K+V++
Sbjct: 579 YKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGG--KQVIR 636
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+S G ++A T D ++ WG NG+L +
Sbjct: 637 VSCGDEFTTAATADNHIFAWGNGGNGRLAM 666
Score = 123 (48.4 bits), Expect = 0.00038, P = 0.00038
Identities = 35/77 (45%), Positives = 45/77 (58%)
Query: 287 GELYTWGSNENGCLGI----GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-I 341
G+LY++GS+ GCLG+ GS +VL P V F PVDQVSCG H A++ K +
Sbjct: 427 GQLYSFGSDYYGCLGVNQSAGS-EVLE-PLLVDF-FLNEPVDQVSCGDSHIMALTRSKSV 483
Query: 342 LTWGWG--GSHGTFSED 356
+WG G G G SED
Sbjct: 484 YSWGCGEYGRLGLDSED 500
Score = 109 (43.4 bits), Expect = 7.9e-25, Sum P(2) = 7.9e-25
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 345
G L T+GSN+ G LG+G + GP V +VSCG + T AA ++ I WG
Sbjct: 598 GRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWG 657
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GG+ G + + + G+D+ P + FG +SC HT ++E V
Sbjct: 658 NGGN-GRLA----MTPNERPQGSDICTSWPRPI-FGSLHHVTDLSCRGWHTILIVEKV 709
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 244 (91.0 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 73/251 (29%), Positives = 124/251 (49%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 463 VAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 522
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P KV+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 523 P--QKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 581 EIPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQL--GVGNYKK 636
Query: 280 RPSL-ISGGEL 289
R + + GG L
Sbjct: 637 RLGINLLGGPL 647
Score = 202 (76.2 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 61/180 (33%), Positives = 89/180 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 103 LGISENIG-------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 564 LGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 624 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 139 (54.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 49/205 (23%), Positives = 86/205 (41%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 370 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 428
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K A + P ++ +Q + G
Sbjct: 429 RQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCG 488
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQKVDVPKALIIVAVQC 539
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM 270
G + + ++G+V G +K+
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKL 564
Score = 124 (48.7 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISEGK-ILTW 344
G+LY +GS+ GC+G+ + E +Q F +PV+QVSCG H ++ K + +W
Sbjct: 445 GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSW 504
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G G+LG ++ DY P V+ + + + V CG + T L +
Sbjct: 505 GCG------------EYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 549
Score = 120 (47.3 bits), Expect = 0.00083, P = 0.00083
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS---ENIGYSLEPLRISGLKKEVVQ 127
+ ++ +A G HT + E G + G N GQLG+ + +G +L + G K+V++
Sbjct: 597 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGG--KQVIR 654
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+S G + A T D ++ WG NG+L +
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 110 (43.8 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 345
G L T+G N+ G LG+G+ + GP V +VSCG + T AA + I WG
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GG+ G + + + HG+D+ P + FG +SC HT ++E V
Sbjct: 676 NGGN-GRLA----MTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTILIVEKV 727
Score = 90 (36.7 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 25/97 (25%), Positives = 45/97 (46%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 414
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+ +++L+G ++ + G + C+ + G++Y FG
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG 451
Score = 86 (35.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
E+Y+WG E G LG+ S + ++P++V P + V V CG T +++ GK+L G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV-AVQCGCDGTFLLTQSGKVLACG 557
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 243 (90.6 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 73/251 (29%), Positives = 124/251 (49%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 463 VAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 522
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P KV+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 523 P--QKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 581 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQL--GVGNYKK 636
Query: 280 RPSL-ISGGEL 289
R + + GG L
Sbjct: 637 RLGINLLGGPL 647
Score = 203 (76.5 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 61/180 (33%), Positives = 89/180 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 103 LGISENIG-------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 564 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 624 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 139 (54.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 49/205 (23%), Positives = 86/205 (41%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 370 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 428
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K A + P ++ +Q + G
Sbjct: 429 RQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCG 488
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQKVDVPKALIIVAVQC 539
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM 270
G + + ++G+V G +K+
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKL 564
Score = 124 (48.7 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISEGK-ILTW 344
G+LY +GS+ GC+G+ + E +Q F +PV+QVSCG H ++ K + +W
Sbjct: 445 GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSW 504
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G G+LG ++ DY P V+ + + + V CG + T L +
Sbjct: 505 GCG------------EYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 549
Score = 120 (47.3 bits), Expect = 0.00083, P = 0.00083
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS---ENIGYSLEPLRISGLKKEVVQ 127
+ ++ +A G HT + E G + G N GQLG+ + +G +L + G K+V++
Sbjct: 597 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGG--KQVIR 654
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+S G + A T D ++ WG NG+L +
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 110 (43.8 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 345
G L T+G N+ G LG+G+ + GP V +VSCG + T AA + I WG
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GG+ G + + + HG+D+ P + FG +SC HT ++E V
Sbjct: 676 NGGN-GRLA----MTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTILIVEKV 727
Score = 90 (36.7 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 25/97 (25%), Positives = 45/97 (46%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 414
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+ +++L+G ++ + G + C+ + G++Y FG
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG 451
Score = 86 (35.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
E+Y+WG E G LG+ S + ++P++V P + V V CG T +++ GK+L G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV-AVQCGCDGTFLLTQSGKVLACG 557
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 246 (91.7 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 77/231 (33%), Positives = 125/231 (54%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG S+ R +P + + ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGESVLERKKPALVPLLQD-VVQAEA-GGMHTVCLSQSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES-SIL 218
K + +P +V+ L K A+ G + V +T G + + G G G+LG E +
Sbjct: 158 PMKKSM-VPVQVQ-LDAPVVKVAS-GNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANR 214
Query: 219 GFLRSTSEY-TPR--LIKE--LEG-VKVKIAAAGFLHSACIDENGRVYIFG 263
G + PR L+K G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFG 265
Score = 176 (67.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 53/179 (29%), Positives = 83/179 (46%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + G P ++ K K V S G HH
Sbjct: 247 CGAYFTFAISREGHVYGFGLSNYHQLG-TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A + IPT + L + A G AV+
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEK-SIPTLISRLPVV--SSVACGASVGYAVSK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQ+ + T K+LE V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG-------KQLENRVVLTVSSGGQHTVLL 414
Score = 170 (64.9 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 52/183 (28%), Positives = 84/183 (45%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ E++ +P + L ++VVQ G H+ ++
Sbjct: 26 SHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP-LLQDVVQAEAGGMHTVCLSQ 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDAPVVKVAS-GNDHLVMLTNDGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 70/262 (26%), Positives = 112/262 (42%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LTE G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + +P V S G + + A G + A++ G V +G
Sbjct: 208 PELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLS 267
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+LG S F+ K G + G H+ C+D G+ Y G
Sbjct: 268 NYHQLGTPGTGSC--FIPQNLTSFKNSTKSWVGF-----SGGQHHTVCMDSEGKAYSLGR 320
Query: 265 RAVDKMLFQEGNHARR-PSLIS 285
++ EG + P+LIS
Sbjct: 321 AEYGRLGLGEGAEEKSIPTLIS 342
Score = 90 (36.7 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 41/135 (30%), Positives = 58/135 (42%)
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER-VQGPFSESPV-DQVSCG 329
F G H + S G+ Y+ G E G LG+G + E+ + S PV V+CG
Sbjct: 299 FSGGQH-HTVCMDSEGKAYSLGRAEYGRLGLGE----GAEEKSIPTLISRLPVVSSVACG 353
Query: 330 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG--ENVKA 386
A+S +G++ WG G ++ QLG G D D P + EN
Sbjct: 354 ASVGYAVSKDGRVFAWGMGTNY------------QLGTGQDEDAWSPVEMTGKQLENRVV 401
Query: 387 LQVSCGFNHTGALLE 401
L VS G HT L++
Sbjct: 402 LTVSSGGQHTVLLVK 416
Score = 48 (22.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 283 LISGGELYTWGSNENGCLG 301
L + G+LYT G E G LG
Sbjct: 187 LTNDGDLYTLGCGEQGQLG 205
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 292 (107.8 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 78/238 (32%), Positives = 115/238 (48%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
TP + L G+ V G+ H+ + + G +Y +G ++ N+ P+ I
Sbjct: 223 -TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI 279
Score = 287 (106.1 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 74/225 (32%), Positives = 117/225 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 204 (76.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 87/322 (27%), Positives = 138/322 (42%)
Query: 59 RWRPV--VCSAFEKHSL-KALACGGA--HTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
+W P+ + S E S+ KA G + +++T+ V+ GLN LG +N +L
Sbjct: 6 KW-PIFTLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQS-TL 63
Query: 114 EPLRISGL-KKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
P ++ L K++ +S G H T DG +Y WG N QLG G + P+
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV-- 121
Query: 172 ECLSGIFTKQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
C + + KQ A G S+A+ G++ +WG G++G G + ++ T
Sbjct: 122 -C-TNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGS---------TANQPT 170
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN---------- 276
PR + L +V A G S + ++G VY +G ++ L GN
Sbjct: 171 PRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAAL 230
Query: 277 -----------HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
+A +L G LY WG+N G LG GS + L SP ++ E ++
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEI 289
Query: 326 VSCGWKHTAAISE--GKILTWG 345
+C HT+A G + WG
Sbjct: 290 AACHSTHTSAAKTQGGHVYMWG 311
Score = 198 (74.8 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 81/313 (25%), Positives = 142/313 (45%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + ++P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + G + T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQ--G-IAPVQVCTNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ ++V A G HS + +G ++ +G ++ G+ A +P+
Sbjct: 127 IKQV--IEV---ACGSHHSMALAADGELFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV V+Q+
Sbjct: 180 TKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG + T+ GQLG G+ + + PT + E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGAN--TY--------GQLGTGSKNNLLSPTQIMV-EKERV 286
Query: 387 LQVS-CGFNHTGA 398
++++ C HT A
Sbjct: 287 IEIAACHSTHTSA 299
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 44/114 (38%), Positives = 63/114 (55%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQ 154
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ 316
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G+H +L + GEL+ WG N G +G GS +P +V V ++CG +
Sbjct: 136 GSH-HSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSM 194
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A+ + G++ WG+ G+ GQLG GN+ + + P V + Q+ CG+
Sbjct: 195 AVLDSGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGY 242
Query: 394 NHTGALLE 401
HT AL +
Sbjct: 243 AHTLALTD 250
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 241 (89.9 bits), Expect = 4.0e-24, Sum P(2) = 4.0e-24
Identities = 72/251 (28%), Positives = 123/251 (49%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 422 HGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 481
Query: 108 NIGYS-LEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 482 VAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 541
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P KV+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 542 P--QKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 599
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 600 EVPYTTSFT--LAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQL--GVGNYKK 655
Query: 280 RPSL-ISGGEL 289
R + + GG L
Sbjct: 656 RLGINLLGGPL 666
Score = 202 (76.2 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 62/180 (34%), Positives = 90/180 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 523 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 582
Query: 103 LGISENIG-------YSLEPLRIS-GLKKEV--VQIST---GYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K++ +I T G H++AI G L +G
Sbjct: 583 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGC 642
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 643 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 701
Score = 145 (56.1 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 50/205 (24%), Positives = 87/205 (42%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 389 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 447
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K A + P ++ S +Q + G
Sbjct: 448 RQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCG 507
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 508 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQKVDVPKALIIVAVQC 558
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM 270
G + + ++G+V G +K+
Sbjct: 559 GCDGTFLLTQSGKVLACGLNEFNKL 583
Score = 130 (50.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISEGK-ILTW 344
G+LY +GS+ GC+G+ + E +Q FS +PV+QVSCG H ++ K + +W
Sbjct: 464 GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSW 523
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G G+LG ++ DY P V+ + + + V CG + T L +
Sbjct: 524 GCG------------EYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 568
Score = 110 (43.8 bits), Expect = 4.0e-24, Sum P(2) = 4.0e-24
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 345
G L T+G N+ G LG+G+ + GP V +VSCG + T AA + I WG
Sbjct: 635 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 694
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GG+ G + + + HG+D+ P + FG +SC HT ++E V
Sbjct: 695 NGGN-GRLA----MTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTILIVEKV 746
Score = 90 (36.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 25/97 (25%), Positives = 45/97 (46%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 378 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 433
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+ +++L+G ++ + G + C+ + G++Y FG
Sbjct: 434 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG 470
Score = 87 (35.7 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
E+Y+WG E G LG+ S + ++P++V P + V V CG T +++ GK+L G
Sbjct: 519 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV-AVQCGCDGTFLLTQSGKVLACGL 577
Query: 347 GGSHGTFSEDGHSS--GGQLGHG--NDVDYIHP-TIVNFGENVKALQVSCGFNHTGALLE 401
F++ G + G + H ++V Y T+ K V+ G HT A+ E
Sbjct: 578 N----EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDE 633
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 288 (106.4 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 103/345 (29%), Positives = 164/345 (47%)
Query: 25 GICKRWISSTL-QRRFAALWGNGDYGRLGLGSLE------SRWRPVVCSAFEKHSLKALA 77
G+ +R +ST +RR +G+G+ G LGL S + P V S + +++
Sbjct: 30 GVVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSIS 88
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQ--ISTGY 132
G H+L +T +G ++A G ND GQLG I + EP R+ GL+ VQ ++G
Sbjct: 89 AGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGV 148
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
S+AI DG L++WG++ GQLGLG + +P++VE L+ + +LG+ ++A+
Sbjct: 149 V-SAAIGDDGSLWVWGRSKRGQLGLGNGIIEA-RVPSRVENLAAEHVVKVSLGWGHALAL 206
Query: 193 TGGGKVLSWGAGGSGRLGH-GQ--ESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGF 247
T GKV WG GR+G+ G E+S+L + S +L E + K+ A
Sbjct: 207 TVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMS 266
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV 307
+ + + + +K+ L G L + GSN G LG D+
Sbjct: 267 KEND-MPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDL 325
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWGGS 349
P + +ESP+ ++ G H+ AI E IL+WGW S
Sbjct: 326 GMKPVDI----TESPIS-IAAGLGHSLAICNRGERNILSWGWNRS 365
Score = 217 (81.4 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 64/194 (32%), Positives = 96/194 (49%)
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRI 118
W P + + +ACG H+L L G + + G N +GQLG S +++G ++P+ I
Sbjct: 275 WEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLG--MKPVDI 332
Query: 119 SGLKKEVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ + + I+ G HS AI GE + WG N + QLG GK +P +VE G
Sbjct: 333 T---ESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN----LPREVEGFDG 385
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ G S+ VT G+ WG G +GRLG G S+ E P L++++E
Sbjct: 386 ESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGS---------SSDEPEPMLLEDVE 436
Query: 237 GVKVKIAAAGFLHS 250
G ++ A AGF HS
Sbjct: 437 GCVLQ-AVAGFDHS 449
Score = 175 (66.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 83/329 (25%), Positives = 142/329 (43%)
Query: 88 ETGCVYATGLNDFGQLGISEN----IGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
E V + G + G LG+S + +G + EP +S L ++ IS G++HS A+T G
Sbjct: 42 ERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSG 101
Query: 143 ELYMWGKNSNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
E++ WG+N GQLG + + P +VE L + + A S A+ G +
Sbjct: 102 EIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWV 161
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G+LG G G + + P ++ L V + G+ H+ + +G+V+
Sbjct: 162 WGRSKRGQLGLGN-----GIIEAR---VPSRVENLAAEHVVKVSLGWGHALALTVDGKVF 213
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
+G A ++ GN P S + T GS + G G +++ + ++V S+
Sbjct: 214 GWGYVADGRV----GN-VGLPLEASLLDSITDGSMK-GHHAAGDLNLEAAEKKVVEAMSK 267
Query: 321 S---PVDQVSCGWKHTAAISEGKILTWGWGGSH-------GTFSEDGHSSGGQLGHGNDV 370
P+ C + T +E K+ G H GT G + GQLG
Sbjct: 268 ENDMPIAWEPCLVEETC--NE-KVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQD 324
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ P V+ E+ + ++ G H+ A+
Sbjct: 325 LGMKP--VDITES--PISIAAGLGHSLAI 349
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/141 (28%), Positives = 64/141 (45%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
++V I+ G HS + DG L G N GQLG K+ + P V+ + A
Sbjct: 286 EKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKP----VDITESPISIAA 341
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
LG ++ G +LSWG S +LG G+ ++ PR ++ +G
Sbjct: 342 GLGHSLAICNRGERNILSWGWNRSRQLGRGKPENL-----------PREVEGFDGESPAS 390
Query: 243 AAAGFLHSACIDENGRVYIFG 263
+AG +HS C+ E G +++G
Sbjct: 391 VSAGRVHSLCVTEKGEAWVWG 411
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 47/152 (30%), Positives = 71/152 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG--CVYATGLNDFG 101
G+ YG+LG + +PV + S ++A G H+L + G + + G N
Sbjct: 311 GSNIYGQLGRSKQDLGMKPVDIT----ESPISIAAGLGHSLAICNRGERNILSWGWNRSR 366
Query: 102 QLGIS--ENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG EN+ P + G E +S G HS +T GE ++WG NG+LGLG
Sbjct: 367 QLGRGKPENL-----PREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLG 421
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+ + P P +E + G QA GF+ S+
Sbjct: 422 SSSDE--PEPMLLEDVEGCVL-QAVAGFDHSL 450
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 293 (108.2 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 74/242 (30%), Positives = 119/242 (49%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LI 284
L+
Sbjct: 281 LV 282
Score = 239 (89.2 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 85/302 (28%), Positives = 136/302 (45%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E F S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKE-----F---PSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPS----------------------LISGGEL 289
G + +G + ++ N + +P L G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWG 347
+T+G N +G LG P+ V+ + V Q+ CG HT A + G+++++G G
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Query: 348 GS 349
S
Sbjct: 316 PS 317
Score = 231 (86.4 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 65/230 (28%), Positives = 106/230 (46%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L G+ P V L + + G + +T GKV ++G SG+LG+
Sbjct: 213 LALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G+ +I + A + G+V FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 221 (82.9 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 84/308 (27%), Positives = 139/308 (45%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRA-----VDKMLFQEGNHARRPSL-------ISGGELYT 291
+ G HS + ++ +V+ +G + + K + + R SL ++ G ++
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193
Query: 292 -----------WGSNENGCLGIGSIDV-LHSPERVQ-GPFSESPVDQVSCGWKHTAAISE 338
WGSN G L + +V + S + + G V +SCG HTA +++
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGFNH 395
GK+ T+G D S GQLG+ + P +V E + L Q+ CG H
Sbjct: 254 DGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQIDCGSYH 298
Query: 396 TGALLEYV 403
T L YV
Sbjct: 299 T---LAYV 303
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 243 (90.6 bits), Expect = 8.7e-24, Sum P(2) = 8.7e-24
Identities = 76/231 (32%), Positives = 124/231 (53%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG S+ R +P + + ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGESVLERKKPALVPLLQD-VVQAEA-GGMHTVCLSQSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQLDTQVV--KVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPR--LIKE--LEG-VKVKIAAAGFLHSACIDENGRVYIFG 263
R E PR L+K G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFG 265
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 54/179 (30%), Positives = 84/179 (46%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + G P ++ K K V S G HH
Sbjct: 247 CGAYFTFAISREGHVYGFGLSNYHQLG-TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A + IPT + L + A G AV+
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEK-SIPTLISRLPVV--SSVACGASVGYAVSK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQE + T K+LE +V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQEDDAWSPVEMTG-------KQLENREVLTVSSGGQHTVLL 414
Score = 167 (63.8 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 52/183 (28%), Positives = 84/183 (45%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ E++ +P + L ++VVQ G H+ ++
Sbjct: 26 SHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP-LLQDVVQAEAGGMHTVCLSQ 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDTQVVKVAS-GNDHLVMLTTDGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 150 (57.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 70/262 (26%), Positives = 114/262 (43%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LTE G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L +VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + + +P V S G + + A G + A++ G V +G
Sbjct: 208 PELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLS 267
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+LG S F+ K G + G H+ C+D G+ Y G
Sbjct: 268 NYHQLGTPGTGSC--FIPQNLTSFKNSTKSWVGF-----SGGQHHTVCMDSEGKAYSLGR 320
Query: 265 RAVDKMLFQEGNHARR-PSLIS 285
++ EG + P+LIS
Sbjct: 321 AEYGRLGLGEGAEEKSIPTLIS 342
Score = 88 (36.0 bits), Expect = 8.7e-24, Sum P(2) = 8.7e-24
Identities = 40/135 (29%), Positives = 59/135 (43%)
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER-VQGPFSESPV-DQVSCG 329
F G H + S G+ Y+ G E G LG+G + E+ + S PV V+CG
Sbjct: 299 FSGGQH-HTVCMDSEGKAYSLGRAEYGRLGLGE----GAEEKSIPTLISRLPVVSSVACG 353
Query: 330 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG--ENVKA 386
A+S +G++ WG G ++ QLG G + D P + EN +
Sbjct: 354 ASVGYAVSKDGRVFAWGMGTNY------------QLGTGQEDDAWSPVEMTGKQLENREV 401
Query: 387 LQVSCGFNHTGALLE 401
L VS G HT L++
Sbjct: 402 LTVSSGGQHTVLLVK 416
Score = 70 (29.7 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKHTAAISEGK 340
G ++ WG N LG G D SP + G E+ V VS G +HT + + K
Sbjct: 364 GRVFAWGMGTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDK 418
Score = 48 (22.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 283 LISGGELYTWGSNENGCLG 301
L + G+LYT G E G LG
Sbjct: 187 LTTDGDLYTLGCGEQGQLG 205
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 241 (89.9 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 72/251 (28%), Positives = 123/251 (49%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 420 HGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 479
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP+++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 480 VAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 539
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P KV+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 540 P--QKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 597
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A +DE GR+ FG ++ GN+ +
Sbjct: 598 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQL--GVGNYKK 653
Query: 280 RPSL-ISGGEL 289
R + + GG L
Sbjct: 654 RLGINLLGGPL 664
Score = 201 (75.8 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 60/180 (33%), Positives = 89/180 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 521 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 580
Query: 103 LGISENIG-------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++A+ G L +G
Sbjct: 581 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGC 640
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 641 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 699
Score = 141 (54.7 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 49/205 (23%), Positives = 87/205 (42%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 387 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 445
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K A + P +++ +Q + G
Sbjct: 446 RQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCG 505
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 506 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQKVDVPKALIIVAVQC 556
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM 270
G + + ++G+V G +K+
Sbjct: 557 GCDGTFLLTQSGKVLACGLNEFNKL 581
Score = 125 (49.1 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKHTAAISEGK-ILTW 344
G+LY +GS+ GC+G+ + E +Q F S PV+QVSCG H ++ K + +W
Sbjct: 462 GQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSW 521
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G G+LG ++ DY P V+ + + + V CG + T L +
Sbjct: 522 GCG------------EYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 566
Score = 122 (48.0 bits), Expect = 0.00051, P = 0.00051
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS---ENIGYSLEPLRISGLKKEVVQ 127
+ ++ +A G HT L E G + G N GQLG+ + +G +L + G K+V++
Sbjct: 614 YKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGG--KQVIR 671
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+S G + A T D ++ WG NG+L +
Sbjct: 672 VSCGDEFTIAATDDNHIFAWGNGGNGRLAM 701
Score = 106 (42.4 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 38/119 (31%), Positives = 57/119 (47%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 345
G L T+G N+ G LG+G+ + GP V +VSCG + T AA + I WG
Sbjct: 633 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 692
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC-GFNHTGALLEYV 403
GG+ G + + + HG+D+ P + FG +SC G+N T ++E V
Sbjct: 693 NGGN-GRLA----MTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWN-TILIVEKV 744
Score = 90 (36.7 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 25/97 (25%), Positives = 45/97 (46%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 376 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 431
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+ +++L+G ++ + G + C+ + G++Y FG
Sbjct: 432 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG 468
Score = 88 (36.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
E+Y+WG E G LG+ S + ++P++V P + V V CG T +++ GK+L G
Sbjct: 517 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV-AVQCGCDGTFLLTQSGKVLACGL 575
Query: 347 GGSHGTFSEDGHSS--GGQLGHG--NDVDYIHP-TIVNFGENVKALQVSCGFNHTGALLE 401
F++ G + G + H ++V Y T+ K ++ G HT AL E
Sbjct: 576 N----EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDE 631
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 284 (105.0 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 73/225 (32%), Positives = 116/225 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 282 (104.3 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 79/238 (33%), Positives = 113/238 (47%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ I
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 279
Score = 230 (86.0 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 62/173 (35%), Positives = 84/173 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + +ACG ++ + + G VY G N G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ N G L P+R++ L V QI GY H+ A+T +G LY WG N+ GQLG G K
Sbjct: 212 QLGLGNN-GNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNK 270
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
+ P VE + A S A T GG V WG G S L H
Sbjct: 271 NNLLSPAHIMVE-KERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 322
Score = 209 (78.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 89/322 (27%), Positives = 138/322 (42%)
Query: 59 RWRPV--VCSAFEKHSL-KALACGGA--HTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
+W P+ + S E S+ KA G + L++T++ V+ GLN LG +N +L
Sbjct: 6 KW-PIFTLLSPHEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHS-TL 63
Query: 114 EPLRISGL-KKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
P ++ L K++ +S G H T DG +Y WG N QLG G + PI
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQV-- 121
Query: 172 ECLSGIFTKQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
C + + KQ A G S+A+ G+V +WG G++G G + ++ T
Sbjct: 122 -C-TNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGS---------TANQPT 170
Query: 229 PRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN---------- 276
PR + +K + A G S + +NG VY +G ++ L GN
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAAL 230
Query: 277 -----------HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
+A +L G LY WG+N G LG G+ + L SP + E ++
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVIEI 289
Query: 326 VSCGWKHTAAISE--GKILTWG 345
+C HT+A G + WG
Sbjct: 290 AACHSAHTSAAKTQGGHVYMWG 311
Score = 208 (78.3 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 85/313 (27%), Positives = 144/313 (46%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + ++P K+E
Sbjct: 13 LSPHEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVP--KKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + L ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V+V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQV--VEV---ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG + T+ GQLG GN + + P + E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGAN--TY--------GQLGTGNKNNLLSPAHIMV-EKERV 286
Query: 387 LQVS-CGFNHTGA 398
++++ C HT A
Sbjct: 287 IEIAACHSAHTSA 299
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G+H +L + GE++ WG N G +G GS +P +V V ++CG +
Sbjct: 136 GSH-HSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSM 194
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A+ + G++ WG+ G+ GQLG GN+ + + P V +V Q+ CG+
Sbjct: 195 AVLDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGY 242
Query: 394 NHTGALLE 401
HT AL +
Sbjct: 243 AHTLALTD 250
Score = 38 (18.4 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
GG +Y WG + + + L S + V F+ V
Sbjct: 304 GGHVYMWGQCRGQSVTLPHLTHLSSTDDVFACFATPAV 341
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 55/151 (36%), Positives = 78/151 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R +P SA H+ +ACG + T+ LT +G VY G +GQ
Sbjct: 466 WGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQ 525
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + N L L L K+ V+ I+ G +H + +T E++ WGK +NG+LG G
Sbjct: 526 LG-NPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVE 584
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT V+ L K A G + A+
Sbjct: 585 DR--KAPTLVDALKERHVKNIACGSNFTAAI 613
Score = 217 (81.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 60/187 (32%), Positives = 92/187 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + P + + S+ +ACG HT +T TG +Y G ++
Sbjct: 296 WGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNA 355
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + ++ +S G H++ IT G+L+ +G + G LG G
Sbjct: 356 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 414
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K + + P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 415 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKS 472
Query: 208 RLGHGQE 214
RLGHG +
Sbjct: 473 RLGHGDK 479
Score = 201 (75.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 79/308 (25%), Positives = 124/308 (40%)
Query: 129 STGYHHSSAITVD--GELYMWGK---------NSNGQLG-LGKKAAKVIPIPTKVECLSG 176
S+ H S+ D G++Y+WG+ ++ +G LG ++ +IP P + +
Sbjct: 214 SSSSHGSAPDDCDALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLD 273
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ A G + + V+ G+V +WG GRLGHG + G P+LI+ L
Sbjct: 274 VH--HIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLA 322
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISG-------- 286
+ A G H+ + G +Y +GD + L G P ISG
Sbjct: 323 ATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIA 382
Query: 287 ---------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
G+L+T+G G LG G + + P V+ S V+CG
Sbjct: 383 SVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVES-LSGLRTIAVACGVW 441
Query: 332 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
H AAI E + S G G +LGHG+ + PT V+ + +V+C
Sbjct: 442 HAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVAC 501
Query: 392 GFNHTGAL 399
G + T L
Sbjct: 502 GHSLTVGL 509
Score = 198 (74.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 70/258 (27%), Positives = 114/258 (44%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G + G LG G+ S W P + E + +++CG HT +T TG ++ G
Sbjct: 348 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGT 407
Query: 100 FGQLGIS--ENIGYSLEPLRISGLKKEVVQISTG-YH----------HSSAITVDGELYM 146
FG LG E + Y E +SGL+ + ++ G +H HSS+ G+L+
Sbjct: 408 FGVLGHGDKETVFYPREVESLSGLR--TIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFT 465
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG +LG G K ++ P T V L + A G +V +T GKV + G+
Sbjct: 466 WGDGDKSRLGHGDKEPRLKP--TCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVY 523
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG+ L L + T ++E+ A G H A + V+ +G A
Sbjct: 524 GQLGNPNADGKLPCLVE-DKLTKDCVEEI--------ACGAYHVAVLTSRNEVFTWGKGA 574
Query: 267 VDKMLFQEGNHARRPSLI 284
++ + + P+L+
Sbjct: 575 NGRLGHGDVEDRKAPTLV 592
Score = 182 (69.1 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 57/188 (30%), Positives = 91/188 (48%)
Query: 90 GCVYATG---LNDFGQLGISENIGYS------LEPLRI-SGLKKEVVQISTGYHHSSAIT 139
G VY G + + G +NIGY L P + S + +V I+ G H++ ++
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVS 288
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
GE++ WG+ S G+LG G K + P +E L+ A G + AVT G++
Sbjct: 289 RQGEVFTWGEASGGRLGHGM--GKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIY 346
Query: 200 SWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDEN 256
+WG G +G LGHG + S + P+ I LEG+++ + G H+A I
Sbjct: 347 TWGDGTHNAGLLGHGTD---------VSHWIPKRISGPLEGLQIASVSCGPWHTALITST 397
Query: 257 GRVYIFGD 264
G+++ FGD
Sbjct: 398 GQLFTFGD 405
Score = 181 (68.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 68/236 (28%), Positives = 103/236 (43%)
Query: 196 GKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACI 253
G V WG + G + +I G+L S S+ P+ ++ + V A G H+A +
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNI-GYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALV 287
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELYT 291
G V+ +G+ + ++ G P LI GE+YT
Sbjct: 288 SRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYT 347
Query: 292 WGSNEN--GCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 347
WG + G LG G+ DV H P+R+ GP + VSCG HTA I S G++ T+G
Sbjct: 348 WGDGTHNAGLLGHGT-DVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFG-- 404
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GTF G LGHG+ +P V ++ + V+CG H A++E +
Sbjct: 405 --DGTF--------GVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVI 450
Score = 173 (66.0 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 56/210 (26%), Positives = 95/210 (45%)
Query: 53 LGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
+G L SR ++ E + + +ACG H ++ G V+ G G+LG +
Sbjct: 251 IGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLG--HGM 308
Query: 110 GYSLE-PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVI 165
G + P I L + ++ G H+ A+T+ GE+Y WG ++ G LG G + I
Sbjct: 309 GKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWI 368
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P L G+ + G + +T G++ ++G G G LGHG + ++
Sbjct: 369 PKRISGP-LEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETV-------- 419
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+ PR ++ L G++ A G H+A I E
Sbjct: 420 -FYPREVESLSGLRTIAVACGVWHAAAIVE 448
Score = 133 (51.9 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
H+ L + G++YT GS G LG + D P V+ ++ V++++CG H A +
Sbjct: 503 HSLTVGLTTSGKVYTMGSTVYGQLGNPNADG-KLPCLVEDKLTKDCVEEIACGAYHVAVL 561
Query: 337 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
S ++ TWG G + G+LGHG+ D PT+V+ + ++CG N
Sbjct: 562 TSRNEVFTWGKGAN------------GRLGHGDVEDRKAPTLVDALKERHVKNIACGSNF 609
Query: 396 TGAL 399
T A+
Sbjct: 610 TAAI 613
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 236 (88.1 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 72/251 (28%), Positives = 123/251 (49%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + ++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 401 HGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 460
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 461 VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 520
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P +V+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 521 P--QRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 578
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 579 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQL--GVGNYKK 634
Query: 280 RPSL-ISGGEL 289
R + + GG L
Sbjct: 635 RLGINLLGGPL 645
Score = 202 (76.2 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 61/180 (33%), Positives = 89/180 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 502 WGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 561
Query: 103 LGISENIG-------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 562 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 621
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 622 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 680
Score = 136 (52.9 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 48/205 (23%), Positives = 86/205 (41%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 368 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 426
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K + + P ++ +Q + G
Sbjct: 427 HQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCG 486
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 487 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQRVDVPKALIIVAVQC 537
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM 270
G + + ++G+V G +K+
Sbjct: 538 GCDGTFLLTQSGKVLACGLNEFNKL 562
Score = 126 (49.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISEGK-ILTW 344
G+LY +GS+ GC+G+ + E +Q F +PV+QVSCG H ++ K + +W
Sbjct: 443 GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSW 502
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G G+LG ++ DY P V+ + + + V CG + T L +
Sbjct: 503 GCG------------EYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 547
Score = 120 (47.3 bits), Expect = 0.00083, P = 0.00083
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS---ENIGYSLEPLRISGLKKEVVQ 127
+ ++ +A G HT + E G + G N GQLG+ + +G +L + G K+V++
Sbjct: 595 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGG--KQVIR 652
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+S G + A T D ++ WG NG+L +
Sbjct: 653 VSCGDEFTIAATDDNHIFAWGNGGNGRLAM 682
Score = 110 (43.8 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 345
G L T+G N+ G LG+G+ + GP V +VSCG + T AA + I WG
Sbjct: 614 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 673
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GG+ G + + + HG+D+ P + FG +SC HT ++E V
Sbjct: 674 NGGN-GRLA----MTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTILIVEKV 725
Score = 89 (36.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
E+Y+WG E G LG+ S + ++P+RV P + V V CG T +++ GK+L G
Sbjct: 498 EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV-AVQCGCDGTFLLTQSGKVLACG 555
Score = 87 (35.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 357 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 412
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+ +++L+G + + G + C+ + G++Y FG
Sbjct: 413 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFG 449
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 236 (88.1 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 72/251 (28%), Positives = 123/251 (49%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + ++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 463 VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 522
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P +V+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 523 P--QRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 581 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQL--GVGNYKK 636
Query: 280 RPSL-ISGGEL 289
R + + GG L
Sbjct: 637 RLGINLLGGPL 647
Score = 202 (76.2 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 61/180 (33%), Positives = 89/180 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 103 LGISENIG-------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 564 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 624 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 136 (52.9 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 48/205 (23%), Positives = 86/205 (41%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 370 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 428
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K + + P ++ +Q + G
Sbjct: 429 HQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCG 488
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQRVDVPKALIIVAVQC 539
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM 270
G + + ++G+V G +K+
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKL 564
Score = 126 (49.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISEGK-ILTW 344
G+LY +GS+ GC+G+ + E +Q F +PV+QVSCG H ++ K + +W
Sbjct: 445 GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSW 504
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G G+LG ++ DY P V+ + + + V CG + T L +
Sbjct: 505 GCG------------EYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 549
Score = 110 (43.8 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 345
G L T+G N+ G LG+G+ + GP V +VSCG + T AA + I WG
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GG+ G + + + HG+D+ P + FG +SC HT ++E V
Sbjct: 676 NGGN-GRLA----MTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTILIVEKV 727
Score = 89 (36.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
E+Y+WG E G LG+ S + ++P+RV P + V V CG T +++ GK+L G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV-AVQCGCDGTFLLTQSGKVLACG 557
Score = 87 (35.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 414
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+ +++L+G + + G + C+ + G++Y FG
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFG 451
Score = 37 (18.1 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 195 GGKVLSWGAGGSGRLGHGQE 214
GG + G GG G G G+E
Sbjct: 752 GGGIGGGGGGGGG--GGGEE 769
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 220 (82.5 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 62/223 (27%), Positives = 103/223 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LG G+ E + P V S ++ ++A+ GG H+ ++++G + G N G
Sbjct: 42 WGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKG 101
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + G + V Q+S G+ + +T DG + G N+ GQLG+ +
Sbjct: 102 QLGLGHTLEIMTFQTCPLPGFGR-VQQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAE 160
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P ++ T AA G ++A T G V WG G S +
Sbjct: 161 KTHSAE-PLLLKSFHEPVTSVAA-GLRHALASTASGCVYQWGTGLSSHAKRMLNPQPVPS 218
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S+ E P L+ V + AG H AC+ NG ++++G
Sbjct: 219 HLSSKE--PCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWG 259
Score = 202 (76.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 96/338 (28%), Positives = 146/338 (43%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRI-SGLKKEVVQISTGYH-HSSAITVDGELYMWGK 149
+Y G N +GQLG N EP R+ SGL++E ++ TG HS+ I+ GEL + G+
Sbjct: 39 LYTWGANSYGQLG-QGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQ 97
Query: 150 NSNGQLGLGKKAAKVIPIPTKVEC-LSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
N GQLGLG + I T C L G +Q + G++ ++ +TG G VL+ G+ G
Sbjct: 98 NHKGQLGLGH----TLEIMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFG 153
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---D 264
+LG E T P L+K V AAG H+ +G VY +G
Sbjct: 154 QLGVSAEK--------THSAEPLLLKSFHE-PVTSVAAGLRHALASTASGCVYQWGTGLS 204
Query: 265 RAVDKMLFQEG--NH--ARRPSLISGGELYTW-----GSNENGCLGI-GSIDVLHSPER- 313
+ML + +H ++ P L+ G T GS CL + G + + S +
Sbjct: 205 SHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHG 264
Query: 314 --VQGP-FSESPV--DQVSCGWKHTAAISEG--KILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ G F PV D+ + + + G ++ G T+ + GQ H
Sbjct: 265 QLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNH 324
Query: 367 GNDVDYIHPTIVNFGENVKAL----QVSCGFNHTGALL 400
+ +V VKAL Q+SCG H A++
Sbjct: 325 SMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVV 362
Score = 201 (75.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 66/230 (28%), Positives = 107/230 (46%)
Query: 44 GNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G G+LGLG +LE ++ F + ++ ++CG T+ LT G V A G N FG
Sbjct: 96 GQNHKGQLGLGHTLEIMTFQTCPLPGFGR--VQQVSCGWDFTIILTGDGLVLACGSNAFG 153
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+S +S EPL + + V ++ G H+ A T G +Y WG G K+
Sbjct: 154 QLGVSAEKTHSAEPLLLKSFHEPVTSVAAGLRHALASTASGCVYQWG---TGLSSHAKRM 210
Query: 162 AKVIPIPT----KVECL----SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
P+P+ K CL + + T++ G +T G++ WG+ G+L G
Sbjct: 211 LNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISG- 269
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S+ FL ++++ E +V +G+ H E+GRV+ +G
Sbjct: 270 --SL--FLPLPVALDRSMLQD-E--RVSDVHSGWTHLVAQTESGRVFTWG 312
Score = 161 (61.7 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 54/172 (31%), Positives = 85/172 (49%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
L S+ P + F + + + G AH LT G ++ G N GQL IS ++ L P
Sbjct: 220 LSSK-EPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQL-ISGSLFLPL-P 276
Query: 116 LRI--SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG-----LGKKAAK--VI 165
+ + S L+ E V + +G+ H A T G ++ WG+++ GQLG + K++ ++
Sbjct: 277 VALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLV 336
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P +V+ L G Q + G E ++AV GG +V SWG G G G I
Sbjct: 337 RSPVEVKALFG--ATQISCGSEHNLAVVGG-RVFSWGWNEHGMCGDGSLQDI 385
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
LWG+ +G+L GSL PV S + + + G H + TE+G V+ G ++
Sbjct: 257 LWGSNKHGQLISGSLFLPL-PVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSN 315
Query: 100 FGQLGIS------ENIGYSL--EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+GQLG + ++ L P+ + L QIS G H+ A+ V G ++ WG N
Sbjct: 316 YGQLGQTNHSMEKQSCDEHLVRSPVEVKALFG-ATQISCGSEHNLAV-VGGRVFSWGWNE 373
Query: 152 NGQLGLG--KKAAKVIPIPTKVECLS 175
+G G G + + PIP + ++
Sbjct: 374 HGMCGDGSLQDITQPQPIPALADAVA 399
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 48/155 (30%), Positives = 73/155 (47%)
Query: 247 FLHSACIDENGRVYIFGDRAVD-KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI 305
FL S D+ VYI + ++ EG+ + +S LYTWG+N G LG G+
Sbjct: 3 FLKSGKTDD---VYIILRHVISWRLNLMEGDQLSK--CVS--LLYTWGANSYGQLGQGNA 55
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ P RV+ E + V+ G H+A IS+ G++L G H GQL
Sbjct: 56 EDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCG----------QNHK--GQL 103
Query: 365 GHGNDVDYI-HPT--IVNFGENVKALQVSCGFNHT 396
G G+ ++ + T + FG + QVSCG++ T
Sbjct: 104 GLGHTLEIMTFQTCPLPGFG---RVQQVSCGWDFT 135
Score = 114 (45.2 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 41/150 (27%), Positives = 66/150 (44%)
Query: 266 AVDKMLFQEGN----HARRPSLIS---GGELYTWGSNENGCLGIG-------SID--VLH 309
A+D+ + Q+ H+ L++ G ++TWG + G LG S D ++
Sbjct: 278 ALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVR 337
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
SP V+ F + Q+SCG +H A+ G++ +WGW HG G G+
Sbjct: 338 SPVEVKALFGAT---QISCGSEHNLAVVGGRVFSWGWN-EHG-----------MCGDGSL 382
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
D P + + AL + CG H+ AL
Sbjct: 383 QDITQPQPIPALADAVALLIGCGAGHSMAL 412
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 230 (86.0 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 66/222 (29%), Positives = 109/222 (49%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +GI +
Sbjct: 413 HGQLGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDK 472
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEPL++ L V Q+S G +H + +T + E+Y WG G+LGL +
Sbjct: 473 AYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYT 532
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG---FL 221
P KV+ + G + + +T GKVL+ G +LG Q S I+ +
Sbjct: 533 P--QKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYC 590
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ L K+L K++ + G H+A IDE GR+ FG
Sbjct: 591 EVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFG 632
Score = 212 (79.7 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 62/180 (34%), Positives = 90/180 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + ++ ++ CG T LT+TG V A GLN+F +
Sbjct: 514 WGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNK 573
Query: 103 LGISE-NIG------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ G Y P S L K+ + IS G H+++I G L +G
Sbjct: 574 LGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGS 633
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 634 NKCGQLGVGDYK-KHLGINLLAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 692
Score = 129 (50.5 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 47/205 (22%), Positives = 84/205 (40%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 380 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYR-QPKHVEKLQGKAI 438
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + IT +G+LY +G + G +G+ K + P +++ +Q + G
Sbjct: 439 RQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCG 498
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+T +V +WG G GRLG E YTP+ + + + +
Sbjct: 499 DNHVAVLTRNREVYTWGCGEYGRLGLDSEED---------HYTPQKVDVPKTLNIVSVHC 549
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM 270
G + + + G+V G +K+
Sbjct: 550 GCDGTFLLTQTGKVLACGLNEFNKL 574
Score = 125 (49.1 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 287 GELYTWGSNENGCLGI----GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-I 341
G+LY +GS+ GC+GI GS +VL P ++ F +PV+QVSCG H A ++ + +
Sbjct: 455 GQLYAFGSDYYGCIGIDKAYGS-EVLE-PLQLDF-FLTNPVEQVSCGDNHVAVLTRNREV 511
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
TWG G G+LG ++ D+ P V+ + + + V CG + T L +
Sbjct: 512 YTWGCG------------EYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQ 559
Score = 124 (48.7 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 47/192 (24%), Positives = 84/192 (43%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+ YG +G+ P+ F + ++ ++CG H LT VY G ++
Sbjct: 460 FGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEY 519
Query: 101 GQLGI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG+ SE Y+ P ++ K +V + G + +T G++ G N +LGL
Sbjct: 520 GRLGLDSEEDHYT--PQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLN 577
Query: 159 KKAAKVIPIPTKVE---CLSGIFTKQAAL--------GFEQSVAVTGGGKVLSWGAGGSG 207
+ + +I T E S KQ + G + ++ G++L++G+ G
Sbjct: 578 QCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCG 637
Query: 208 RLGHGQESSILG 219
+LG G LG
Sbjct: 638 QLGVGDYKKHLG 649
Score = 116 (45.9 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 39/123 (31%), Positives = 57/123 (46%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGK 340
S+ G L T+GSN+ G LG+G + GP V +VSCG + T AA +
Sbjct: 621 SIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIAATDDNH 680
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
I WG GG+ G + + + HG+D+ P + FG +SC HT ++
Sbjct: 681 IFAWGNGGN-GRLA----MTPTERAHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTIIVV 734
Query: 401 EYV 403
E V
Sbjct: 735 EKV 737
Score = 97 (39.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 33/120 (27%), Positives = 58/120 (48%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
E+YTWG E G LG+ S + ++P++V P + + V V CG T +++ GK+L G
Sbjct: 510 EVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVS-VHCGCDGTFLLTQTGKVLACGL 568
Query: 347 GGSHGTFSEDG--HSSGGQLGHGNDVDYIHPTIVNFGENV---KALQVSCGFNHTGALLE 401
F++ G + G + H + + T + + + K +S G HT ++ E
Sbjct: 569 N----EFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDE 624
Score = 91 (37.1 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 26/97 (26%), Positives = 45/97 (46%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 369 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDRASY 424
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+ +++L+G ++ + G + CI + G++Y FG
Sbjct: 425 RQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFG 461
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 290 (107.1 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 103/367 (28%), Positives = 168/367 (45%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P V + ++++CG + + +T+ G +Y+ G G+LG Y P I
Sbjct: 290 PKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV-CSYVPHPKLIDEF 348
Query: 122 KKEVVQIST-GYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIF 178
V+++ G H+ A+T G+LY WG + G LGLG A+ P+ + + GI+
Sbjct: 349 NGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIY 407
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
K + G + VT GK+ ++G G G LGHG S T+ PR ++ L G
Sbjct: 408 VKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRIS-------TN--IPREVEALNGC 458
Query: 239 KVKIAAAGFLHSACI-------DENGRVYIFGDRAVDKMLFQEGNHARR-PSLISG---- 286
+ AA G HSA + +G+++ +GD D L R PS ++
Sbjct: 459 RTIKAACGVWHSAAVVSVFGEATSSGKLFTWGD-GDDGRLGHGDIECRLIPSCVTELDTT 517
Query: 287 -------GELYTWGSNENG---CLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G+ T + +G +G S D++ +P ++G +S V +V+CG+ H A
Sbjct: 518 SFQQVACGQSITVALSMSGQVYAMGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIA 577
Query: 335 AI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY-IHPTIVNFGENVKALQVSCG 392
+ S+ ++ TWG G S GQLGHG D +Y PT+V + + +V CG
Sbjct: 578 VLNSKAEVYTWGKG------------SNGQLGHG-DTEYRCMPTLVKALKGKQVRKVVCG 624
Query: 393 FNHTGAL 399
N+T +
Sbjct: 625 SNYTATI 631
Score = 280 (103.6 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 101/329 (30%), Positives = 143/329 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F +++ CG HT +T +G +YA G D
Sbjct: 323 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 382
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + + IS G H++ +T +G+L+ +G + G LG G
Sbjct: 383 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 441
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T +AA G S AV T GK+ +WG G GRLGH
Sbjct: 442 DRIST--NIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 499
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------- 264
G L P + EL+ + A G + + +G+VY G
Sbjct: 500 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHDI 550
Query: 265 -RA-------VDKMLFQEG--NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
RA + K QE L S E+YTWG NG LG G + P V
Sbjct: 551 VRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLV 610
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKILT 343
+ V +V CG +TA I K +T
Sbjct: 611 KA-LKGKQVRKVVCGSNYTATICLHKPIT 638
Score = 174 (66.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 73/290 (25%), Positives = 126/290 (43%)
Query: 143 ELYMWGKN-SNGQLGLGK----KAAKVIP---IPTKVECLSGIFTKQAALGFEQSVAVTG 194
++++WG++ +G LG G ++ ++ +P ++ + + + G +V VT
Sbjct: 257 DVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTK 316
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ SWG GRLGHG + ++ P+LI E G V++A G H+ +
Sbjct: 317 QGQMYSWGEESGGRLGHG----VCSYVPH-----PKLIDEFNGSTVELADCGEFHTCAVT 367
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHAR--RPSLISG-----------------------GEL 289
+G +Y +GD + L G+ A +P I G G+L
Sbjct: 368 ASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKL 427
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 349
+T+G G LG G + P V+ + + +CG H+AA+ + +G S
Sbjct: 428 FTFGDGTFGALGHGDRISTNIPREVEA-LNGCRTIKAACGVWHSAAV----VSVFGEATS 482
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G G G+LGHG+ + P+ V + QV+CG + T AL
Sbjct: 483 SGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVAL 532
Score = 168 (64.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 59/229 (25%), Positives = 98/229 (42%)
Query: 198 VLSWGAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V WG G G LG G S T + P+++K + + + G ++ + +
Sbjct: 258 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQ 317
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGS 294
G++Y +G+ + ++ ++ P LI + G+LY WG
Sbjct: 318 GQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGD 377
Query: 295 NEN--GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 351
++ G LG+GS P R+ G V +SCG HTA + SEGK+ T+G G
Sbjct: 378 GDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG----DG 433
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
TF G LGHG+ + P V + ++ +CG H+ A++
Sbjct: 434 TF--------GALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 474
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 286 (105.7 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 74/225 (32%), Positives = 116/225 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 128 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 187
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 188 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 246
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 247 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 304
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 305 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 284 (105.0 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 78/238 (32%), Positives = 114/238 (47%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 83 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 141
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 142 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 199
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 200 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 251
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ I
Sbjct: 252 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 308
Score = 230 (86.0 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 62/173 (35%), Positives = 85/173 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + ++ACG ++ + + G VY G N G
Sbjct: 181 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNG 240
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ N G L P+R++ L V QI GY H+ A+T +G LY WG N+ GQLG G K
Sbjct: 241 QLGLGNN-GNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNK 299
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
+ P VE + A S A T GG V WG G S L H
Sbjct: 300 NNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 351
Score = 210 (79.0 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 82/292 (28%), Positives = 125/292 (42%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH-HSSAITVD 141
L++T+ V+ GLN LG +N +L P ++ L K++ +S G H T D
Sbjct: 64 LYVTDNDEVFVFGLNYSNCLGTGDNQS-TLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 122
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKV 198
G +Y WG N QLG G + PI C + + KQ A G S+A+ G+V
Sbjct: 123 GVVYAWGHNGYSQLGNGTTNQGIAPIQV---C-TNLLIKQVVEVACGSHHSMALAADGEV 178
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENG 257
+WG G++G G + ++ TPR + +K ++ A G S + +NG
Sbjct: 179 FAWGYNNCGQVGSGS---------TANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNG 229
Query: 258 RVYIFGDRAVDKM-LFQEGN---------------------HARRPSLISGGELYTWGSN 295
VY +G ++ L GN +A +L G LY WG+N
Sbjct: 230 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 289
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
G LG G+ + L SP + E V+ +C HT+A G + WG
Sbjct: 290 TYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 208 (78.3 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 84/313 (26%), Positives = 145/313 (46%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + ++P K+E
Sbjct: 42 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 98
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 99 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 155
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V+V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 156 IKQV--VEV---ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 208
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 209 IKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 267
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG + T+ GQLG GN + + P + E +
Sbjct: 268 VCGYAHTLALTDEGLL-YAWGAN--TY--------GQLGTGNKNNLLSPAHIMV-EKERV 315
Query: 387 LQVS-CGFNHTGA 398
++++ C HT A
Sbjct: 316 VEIAACHSAHTSA 328
Score = 135 (52.6 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G+H +L + GE++ WG N G +G GS +P +V V ++CG +
Sbjct: 165 GSH-HSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSM 223
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A+ + G++ WG+ G+ GQLG GN+ + + P V +V Q+ CG+
Sbjct: 224 AVLDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGY 271
Query: 394 NHTGALLE 401
HT AL +
Sbjct: 272 AHTLALTD 279
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 238 (88.8 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 74/231 (32%), Positives = 123/231 (53%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFG 263
R E P+ + + G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFG 265
Score = 178 (67.7 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDVPVVKVAS-GNDHLVMLTADGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 173 (66.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 46/140 (32%), Positives = 69/140 (49%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + P ++ K K V S G HH
Sbjct: 247 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFI-PQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A + IPT + L + A G AVT
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEK-SIPTLISRLPAV--SSVACGASVGYAVTK 362
Query: 195 GGKVLSWGAGGSGRLGHGQE 214
G+V +WG G + +LG GQ+
Sbjct: 363 DGRVFAWGMGTNYQLGTGQD 382
Score = 148 (57.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 71/263 (26%), Positives = 115/263 (43%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LT+ G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + + +P V S G + + A G + A++ G V +G
Sbjct: 208 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLS 267
Query: 205 GSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LG G ES F+ K G + G H+ C+D G+ Y G
Sbjct: 268 NYHQLGTPGTESC---FIPQNLTSFKNSTKSWVGF-----SGGQHHTVCMDSEGKAYSLG 319
Query: 264 DRAVDKMLFQEGNHARR-PSLIS 285
++ EG + P+LIS
Sbjct: 320 RAEYGRLGLGEGAEEKSIPTLIS 342
Score = 89 (36.4 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 41/136 (30%), Positives = 59/136 (43%)
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER-VQGPFSESP-VDQVSCG 329
F G H + S G+ Y+ G E G LG+G + E+ + S P V V+CG
Sbjct: 299 FSGGQH-HTVCMDSEGKAYSLGRAEYGRLGLGE----GAEEKSIPTLISRLPAVSSVACG 353
Query: 330 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG---ENVK 385
A++ +G++ WG G ++ QLG G D D P + G EN
Sbjct: 354 ASVGYAVTKDGRVFAWGMGTNY------------QLGTGQDEDAWSP-VEMMGKQLENRV 400
Query: 386 ALQVSCGFNHTGALLE 401
L VS G HT L++
Sbjct: 401 VLSVSSGGQHTVLLVK 416
Score = 68 (29.0 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD-QVSCGWKHTAAISEGK 340
G ++ WG N LG G + SP + G E+ V VS G +HT + + K
Sbjct: 364 GRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDK 418
Score = 48 (22.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 283 LISGGELYTWGSNENGCLG 301
L + G+LYT G E G LG
Sbjct: 187 LTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 285 (105.4 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 75/225 (33%), Positives = 116/225 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 277 (102.6 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 77/238 (32%), Positives = 113/238 (47%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ I
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 279
Score = 216 (81.1 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 85/304 (27%), Positives = 129/304 (42%)
Query: 74 KALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
KA G + L++T+ V+ GLN LG +N +L P ++ GL K++ +S
Sbjct: 23 KACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQS-TLVPKKLEGLCGKKIKSLSY 81
Query: 131 GYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGF 186
G H T DG +Y WG N QLG G + P+ C + + KQ A G
Sbjct: 82 GSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV---C-TNLLIKQVVEVACGS 137
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AA 245
S+A+ G+V +WG G++G G + ++ TPR + +K + A
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGS---------TANQPTPRKVTNCLHIKRVVGIAC 188
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQEGN---------------------HARRPSL 283
G S + +NG VY +G ++ L GN +A +L
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKI 341
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G +
Sbjct: 249 TDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHV 307
Query: 342 LTWG 345
WG
Sbjct: 308 YMWG 311
Score = 204 (76.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 85/313 (27%), Positives = 143/313 (45%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + ++P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + G + T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ--G-IAPVQVCTNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V+V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQV--VEV---ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG + T+ GQLG GN + + P + E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGAN--TY--------GQLGTGNKNNLLSPAHIMV-EKERV 286
Query: 387 LQVS-CGFNHTGA 398
++++ C HT A
Sbjct: 287 VEIAACHSAHTSA 299
Score = 194 (73.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 50/138 (36%), Positives = 71/138 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTG-NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G+H +L + GE++ WG N G +G GS +P +V V ++CG +
Sbjct: 136 GSH-HSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSM 194
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A+ + G++ WG+ G+ GQLG GN+ + + P V +V Q+ CG+
Sbjct: 195 AVLDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGY 242
Query: 394 NHTGALLE 401
HT AL +
Sbjct: 243 AHTLALTD 250
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 241 (89.9 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 76/231 (32%), Positives = 126/231 (54%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVPIPED-IVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ LS K A+ G + V +T G++ + G+G G+LG E
Sbjct: 158 PMKKSM-VPVQVQ-LSMPVVKVAS-GNDHLVMLTADGELYTLGSGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFG 263
R E P+ + + G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFG 265
Score = 180 (68.4 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 53/179 (29%), Positives = 82/179 (45%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + P ++ K K V+ S G HH
Sbjct: 247 CGAYFTFAISSEGHVYGFGLSNYHQLG-TPGTESCFVPQNLTSFKNSTKSWVRFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G Y G+ G+LGLG+ A + +PT + L + A G AVT
Sbjct: 306 TVCMDSEGRAYSLGRAEYGRLGLGEGAEEK-SVPTLISRLPAV--SSVACGASVGYAVTK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQE + T K+LE V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQEEDAWSPVEMTG-------KQLENRMVLSVSSGGQHTVLL 414
Score = 171 (65.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 51/183 (27%), Positives = 83/183 (45%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P + + +++VQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVP-IPEDIVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLSMPVVKVAS-GNDHLVMLTADGELY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 162 (62.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 74/264 (28%), Positives = 117/264 (44%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LTE G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +T DGELY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + + +P V S G + + A G + A++ G V +G
Sbjct: 208 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLS 267
Query: 205 GSGRLGH-GQESSILGF-LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+LG G ES + L S T ++ + G H+ C+D GR Y
Sbjct: 268 NYHQLGTPGTESCFVPQNLTSFKNSTKSWVR---------FSGGQHHTVCMDSEGRAYSL 318
Query: 263 GDRAVDKMLFQEGNHARR-PSLIS 285
G ++ EG + P+LIS
Sbjct: 319 GRAEYGRLGLGEGAEEKSVPTLIS 342
Score = 85 (35.0 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 40/135 (29%), Positives = 57/135 (42%)
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER-VQGPFSESP-VDQVSCG 329
F G H + S G Y+ G E G LG+G + E+ V S P V V+CG
Sbjct: 299 FSGGQH-HTVCMDSEGRAYSLGRAEYGRLGLGE----GAEEKSVPTLISRLPAVSSVACG 353
Query: 330 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG--ENVKA 386
A++ +G++ WG G ++ QLG G + D P + EN
Sbjct: 354 ASVGYAVTKDGRVFAWGMGTNY------------QLGTGQEEDAWSPVEMTGKQLENRMV 401
Query: 387 LQVSCGFNHTGALLE 401
L VS G HT L++
Sbjct: 402 LSVSSGGQHTVLLVK 416
Score = 66 (28.3 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAISEGK 340
G ++ WG N LG G + SP + G E+ V VS G +HT + + K
Sbjct: 364 GRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLSVSSGGQHTVLLVKDK 418
Score = 57 (25.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI- 341
L + GELYT GS E G LG + L + + V + C + S G +
Sbjct: 187 LTADGELYTLGSGEQGQLG--RVPELFANRGGRQGLERLLVPK--CVMLKSRG-SRGHVR 241
Query: 342 LTWGWGGSHGTF--SEDGHSSG-G-----QLGH-GNDVDYIHPTIVNFGENVKA-LQVSC 391
+ G++ TF S +GH G G QLG G + ++ + +F + K+ ++ S
Sbjct: 242 FQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSG 301
Query: 392 GFNHT 396
G +HT
Sbjct: 302 GQHHT 306
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 240 (89.5 bits), Expect = 7.4e-23, Sum P(2) = 7.4e-23
Identities = 76/231 (32%), Positives = 126/231 (54%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPED-IVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++V+Q+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVD-LQEKVIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ LS K A+ G + V +T G + + G+G G+LG E
Sbjct: 158 PMKKSM-VPVQVQ-LSVPVVKVAS-GNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFG 263
R E P+ + + G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFG 265
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG ++ P ++ K K V S G HH
Sbjct: 247 CGAYFTFAISSEGHVYGFGLSNYHQLG-TQGTESCFVPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A + +PT + L + A G AVT
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEK-SVPTLIPRLPTV--SSVACGASVGYAVTK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQ+ + T K+LE V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG-------KQLENRVVLTVSSGGQHTVLL 414
Score = 169 (64.5 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 51/183 (27%), Positives = 84/183 (45%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + +++VQ G H+ ++
Sbjct: 26 SHRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDIVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KV+ + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVDLQEKVI--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLSVPVVKVAS-GNDHLVMLTVDGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 157 (60.3 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 72/262 (27%), Positives = 115/262 (43%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LTE G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVDLQEK--VIQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +TVDG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + + +P V S G + + A G + A++ G V +G
Sbjct: 208 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLS 267
Query: 205 GSGRLG-HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LG G ES F+ K G + G H+ C+D G+ Y G
Sbjct: 268 NYHQLGTQGTESC---FVPQNLTSFKNSTKSWVGF-----SGGQHHTVCMDSEGKAYSLG 319
Query: 264 DRAVDKMLFQEGNHARR-PSLI 284
++ EG + P+LI
Sbjct: 320 RAEYGRLGLGEGAEEKSVPTLI 341
Score = 83 (34.3 bits), Expect = 7.4e-23, Sum P(2) = 7.4e-23
Identities = 40/135 (29%), Positives = 57/135 (42%)
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER-VQGPFSESP-VDQVSCG 329
F G H + S G+ Y+ G E G LG+G + E+ V P V V+CG
Sbjct: 299 FSGGQH-HTVCMDSEGKAYSLGRAEYGRLGLGE----GAEEKSVPTLIPRLPTVSSVACG 353
Query: 330 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG--ENVKA 386
A++ +G++ WG G ++ QLG G D D P + EN
Sbjct: 354 ASVGYAVTKDGRVFAWGMGTNY------------QLGTGQDEDAWSPVEMTGKQLENRVV 401
Query: 387 LQVSCGFNHTGALLE 401
L VS G HT L++
Sbjct: 402 LTVSSGGQHTVLLVK 416
Score = 82 (33.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 53/197 (26%), Positives = 80/197 (40%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
K + V++S H S T G + G+ GQLGLG+ + P V I Q
Sbjct: 19 KSKKVKVS----HRSHGTEPGVVLTLGQGDVGQLGLGENVMERKK-PALVSIPEDIV--Q 71
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG--FLRSTSEYTPRLIKELEGVK 239
A G +V ++ G+V S+G G LG +++S+ G + + ++I+ G
Sbjct: 72 AEAGGMHTVCLSKSGQVYSFGCNDEGALG--RDTSVEGSEMVPGKVDLQEKVIQVSAGDS 129
Query: 240 VKIAAA--G--FLHSACIDENGRVYIFGDR-----------AVDKMLFQEGNHARRPSLI 284
A G FL + D NG + + +V + GN L
Sbjct: 130 HTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSVPVVKVASGND-HLVMLT 188
Query: 285 SGGELYTWGSNENGCLG 301
G+LYT GS E G LG
Sbjct: 189 VDGDLYTLGSGEQGQLG 205
Score = 73 (30.8 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD-QVSCGWKHTAAISEGKILTW 344
G ++ WG N LG G + SP + G E+ V VS G +HT + + K +W
Sbjct: 364 GRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDKEQSW 422
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 235 (87.8 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 77/231 (33%), Positives = 123/231 (53%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG S+ R +P + + ++A A GG HT+ L ++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGESVLERKKPALVPLLQD-VVQAEA-GGMHTVCLNQSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ L K A+ G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQ-LDMPVVKVAS-GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPR--LIKEL--EG-VKVKIAAAGFLHSACIDENGRVYIFG 263
R E P+ L+K G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFG 265
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 52/179 (29%), Positives = 82/179 (45%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + P ++ K K V S G HH
Sbjct: 247 CGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFI-PQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A + IPT + L + A G AV+
Sbjct: 306 TICMDSEGKAYSLGRAEYGRLGLGEGAEEK-SIPTLISRLPVV--SSVACGASVGYAVSK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQ+ + T K+LE V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG-------KQLENRVVLTVSSGGQHTVLL 414
Score = 166 (63.5 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 52/183 (28%), Positives = 83/183 (45%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ E++ +P + L ++VVQ G H+ +
Sbjct: 26 SHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP-LLQDVVQAEAGGMHTVCLNQ 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDMPVVKVAS-GNDHLVMLTTDGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 148 (57.2 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 68/261 (26%), Positives = 117/261 (44%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LTE G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G++ + + +P V S + + F+ + G L++ G +
Sbjct: 208 PELFANRGGRQGLERLLVPKCVLLKSR--GSRGRVRFQDAFC----GAYLTFAISREGHV 261
Query: 210 -GHGQES-SILGFLRSTSEYTPRLIKELEG-VKVKIA-AAGFLHSACIDENGRVYIFGDR 265
G G + LG + S + P+ + + K + + G H+ C+D G+ Y G
Sbjct: 262 YGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRA 321
Query: 266 AVDKMLFQEGNHARR-PSLIS 285
++ EG + P+LIS
Sbjct: 322 EYGRLGLGEGAEEKSIPTLIS 342
Score = 89 (36.4 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 41/135 (30%), Positives = 58/135 (42%)
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER-VQGPFSESPV-DQVSCG 329
F G H + S G+ Y+ G E G LG+G + E+ + S PV V+CG
Sbjct: 299 FSGGQH-HTICMDSEGKAYSLGRAEYGRLGLGE----GAEEKSIPTLISRLPVVSSVACG 353
Query: 330 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG--ENVKA 386
A+S +G++ WG G ++ QLG G D D P + EN
Sbjct: 354 ASVGYAVSKDGRVFAWGMGTNY------------QLGTGQDEDAWSPVEMTGKQLENRVV 401
Query: 387 LQVSCGFNHTGALLE 401
L VS G HT L++
Sbjct: 402 LTVSSGGQHTVLLVK 416
Score = 66 (28.3 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD-QVSCGWKHTAAISEGK 340
G ++ WG N LG G + SP + G E+ V VS G +HT + + K
Sbjct: 364 GRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDK 418
Score = 48 (22.0 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 283 LISGGELYTWGSNENGCLG 301
L + G+LYT G E G LG
Sbjct: 187 LTTDGDLYTLGCGEQGQLG 205
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 282 (104.3 bits), Expect = 8.6e-23, P = 8.6e-23
Identities = 73/225 (32%), Positives = 114/225 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVGSGSTTNQPT-PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 278 (102.9 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 77/238 (32%), Positives = 113/238 (47%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ I
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 279
Score = 214 (80.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 83/292 (28%), Positives = 125/292 (42%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH-HSSAITVD 141
L++T+ V+ GLN LG +N +L P ++ L K++ +S G H T D
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQS-TLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKV 198
G +Y WG N QLG G + PI C + + KQ A G S+A+ G+V
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQV---C-TNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENG 257
+WG G++G G +T++ TPR + +K + A G S + +NG
Sbjct: 150 FAWGYNNCGQVGSGS---------TTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 258 RVYIFGDRAVDKM-LFQEGN---------------------HARRPSLISGGELYTWGSN 295
VY +G ++ L GN +A +L G LY WG+N
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
G LG G+ + L SP + E V+ +C HT+A G + WG
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 207 (77.9 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 86/311 (27%), Positives = 144/311 (46%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + ++P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------------DRAVDKMLFQE 274
IK++ V+V A G HS + +G V+ +G R V L +
Sbjct: 127 IKQV--VEV---ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 275 ---GNHARRPS---LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
G + S ++ GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 329 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
G+ HT A+++ +L + WG + T+ GQLG GN + + P + E + ++
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN--TY--------GQLGTGNKNNLLSPAHIMV-EKERVVE 288
Query: 389 VS-CGFNHTGA 398
++ C HT A
Sbjct: 289 IAACHSAHTSA 299
Score = 195 (73.7 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 51/138 (36%), Positives = 71/138 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTG-NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G+H +L + GE++ WG N G +G GS +P +V V ++CG +
Sbjct: 136 GSH-HSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSM 194
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A+ + G++ WG+ G+ GQLG GN+ + + P V +V Q+ CG+
Sbjct: 195 AVLDNGEVYGWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGY 242
Query: 394 NHTGALLE 401
HT AL +
Sbjct: 243 AHTLALTD 250
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 287 (106.1 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 108/386 (27%), Positives = 170/386 (44%)
Query: 43 WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +LG +S+ P F + +++ G ++ LTE G VY G
Sbjct: 718 WGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGRGA 777
Query: 100 FGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LGI + I L P ++ L +VV +S G+ H +A+ +GEL WG NGQ
Sbjct: 778 VKTPAVPILGIPQ-IEDQLLPFKLESLS-DVVSVSIGFCHGAAVRANGELLTWGVGENGQ 835
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G ++ P ++ L+ + Q G + ++ +T GKV SWGA G+LG G
Sbjct: 836 LGHGDTNNQIEP--KIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDV 893
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD------ 268
T +P + LE V A+G H A + + V +FG+ A
Sbjct: 894 ---------TQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGAAMGAASVV 944
Query: 269 ---------KMLFQEG---NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
K L + H ++ G++YTWG+ + LG G SP+ ++
Sbjct: 945 SLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE--LGHGGNSTETSPKLIEA 1002
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
++S + Q+SCG +HTA +++ G+I T G +D S GQLG + D P
Sbjct: 1003 LRNQS-IRQISCGGRHTAFLTDSGRIFTCG---------KD---SFGQLGQMSG-DQNKP 1048
Query: 376 TIVNFGENVKALQVSCGFNHTGALLE 401
+ + VSCG N+ AL +
Sbjct: 1049 KRIESLTKTTFISVSCGENYNVALFD 1074
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 279 (103.3 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 77/225 (34%), Positives = 117/225 (52%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLGS + +P A + K CG HTL TE G VYA G N G
Sbjct: 60 MFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 119
Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ + + L IS + + Q++ G + S+A+T DG+L++WG NS GQ+GL
Sbjct: 120 QLGLGDTEERTTFHL-ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLAD 178
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ G + G+ S +TG G++ ++G +G+LG E
Sbjct: 179 KTC--VSVPCQVDV--GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ---- 230
Query: 220 FLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L+++ P L I E KV A G H+ + E G VY FG
Sbjct: 231 -LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-VYTFG 269
Score = 261 (96.9 bits), Expect = 8.7e-20, P = 8.7e-20
Identities = 100/337 (29%), Positives = 154/337 (45%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
E+G V+ FG+ +ENI P + + V IS G H++ +T +G+LYM+
Sbjct: 12 ESGAVFT-----FGKSNFAENI-----PSKFWFKNDKPVHISCGDEHTAVVTGNGKLYMF 61
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N GQLGLG K + PT V+ L TK A G ++ T G V + G G
Sbjct: 62 GSNDWGQLGLGSK--NTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 119
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G F S +T + K+K AAG SA + E+G+++++GD +
Sbjct: 120 QLGLGDTEERTTF-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSE 171
Query: 268 DKMLFQEGNHARRP-------------------SLISG-GELYTWGSNENGCLGIGSIDV 307
++ + P + I+G GELYT+G ENG LG+ +
Sbjct: 172 GQIGLADKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQL 231
Query: 308 LHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+S P+ V G + V++V+CG +HT ++E + T+G G GQLG
Sbjct: 232 KNSRVPQPVLGIMEK--VNKVACGGEHTVVLTETGVYTFGLG------------QYGQLG 277
Query: 366 HGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 401
HG + P V + K V+CG +HT + +
Sbjct: 278 HGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAD 314
Score = 254 (94.5 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 102/350 (29%), Positives = 156/350 (44%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
++CG HT +T G +Y G ND+GQLG+ S+N +P + LK E +++ G +
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNT--VRKPTCVKALKPEKTKLAVCGRN 99
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
H+ T G +Y G NS GQLGLG + T +S FT KQ A G
Sbjct: 100 HTLVYTEKGNVYAAGGNSEGQLGLGDTEER-----TTFHLIS-FFTNQHKIKQLAAGSYT 153
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S AVT G++ WG G++G ++ + P + G V + G+
Sbjct: 154 SAAVTEDGQLFVWGDNSEGQIGLADKTCVS---------VPCQVDV--GKPVSSISCGYY 202
Query: 249 HSACIDENGRVYIFGDRAVDKM--LFQEGNHARRPSLI-----------SGGE------- 288
HSA I +G +Y FG+ K+ L ++ ++R P + GGE
Sbjct: 203 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 262
Query: 289 --LYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
+YT+G + G LG G++ S P+ V+ S + V+CG HTA I++ +
Sbjct: 263 TGVYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHK-IHNVTCGESHTAVIADTE----- 316
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
G TF + H G LG N + P + + + L V+CG H
Sbjct: 317 -NGLMFTFGDGRHGKLG-LGEENFANQFDPALCSNFLSFTVLLVACGGCH 364
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 280 (103.6 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 72/205 (35%), Positives = 106/205 (51%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
RP+ E + +ACG H++ LT G ++ G N GQLG+ + + P +
Sbjct: 108 RPL--KGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQS 165
Query: 121 LKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L V QIS G +HS +++ G ++ WG NS GQLGLG + IP T V+ LSG T
Sbjct: 166 LCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIP--TIVKSLSGKKT 223
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ G E + ++ GG V ++G+GG G+LGH L+ E+ PRL+ EL G K
Sbjct: 224 VSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNS-------LKD--EHHPRLVAELWGSK 274
Query: 240 VKIAAAGFLHSACI-DENGRVYIFG 263
V G H+ D + ++Y FG
Sbjct: 275 VSQVTCGRHHTLVFEDSSNQIYSFG 299
Score = 234 (87.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 58/178 (32%), Positives = 92/178 (51%)
Query: 118 ISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ GL+ ++V+QI+ G HS A+T DG+L++WG+N+ GQLGL K+ A P ++ L G
Sbjct: 110 LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGT-QSPQHLQSLCG 168
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
I Q + G S ++ G V WG+ +G+LG G +T + P ++K L
Sbjct: 169 IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGD---------TTDRFIPTIVKSLS 219
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGS 294
G K + G H+A + + G V+ FG ++ P L++ EL WGS
Sbjct: 220 GKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVA--EL--WGS 273
Score = 187 (70.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 44/149 (29%), Positives = 74/149 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LGLG R+ P + + +++CGG HT L++ G V+ G FGQ
Sbjct: 193 WGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ 252
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAIT-VDGELYMWGKNSNGQLGLGKK 160
LG ++ P ++ L +V Q++ G HH+ ++Y +G GQLG G++
Sbjct: 253 LG-HNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQ 311
Query: 161 AAKVIPIPTKV--ECLSGIFTKQAALGFE 187
+ +P+P + EC FT + + E
Sbjct: 312 VKQSVPLPVLLPTECTE--FTMEKLIAGE 338
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 66/226 (29%), Positives = 103/226 (45%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
++ S G +G + + +L +ST R +K LE +V A G HS + +
Sbjct: 78 RIRSIVCGEAGAVLLADDGKVLVMDQST---VCRPLKGLENRQVIQIACGDQHSMALTND 134
Query: 257 GRVYIFGDRAVDKM-LFQE------------------------GNHARRPSLISGGELYT 291
G+++++G+ A+ ++ L +E GNH+ SL G ++
Sbjct: 135 GQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLSL--SGVVFG 192
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSH 350
WGSN G LG+G P V+ + V +SCG +HTA +S+G + T+G GG
Sbjct: 193 WGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVS-ISCGGEHTATLSKGGTVFTFGSGG-- 249
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
F GQLGH + D HP +V K QV+CG +HT
Sbjct: 250 --F--------GQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHT 285
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 40/119 (33%), Positives = 57/119 (47%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
+L + G+L+ WG N G LG+ SP+ +Q PV Q+S G H+ +S
Sbjct: 130 ALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQS-LCGIPVAQISAGGNHSFVLSLSG 188
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
++ +GWG + S GQLG G+ D PTIV K + +SCG HT L
Sbjct: 189 VV-FGWGSN----------SAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATL 236
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 278 (102.9 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 99/327 (30%), Positives = 156/327 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ + S L IS ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL +
Sbjct: 118 QLGLGDTEERSTFHL-ISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL-E 175
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V +P +V I + G+ S VT G++ ++G G+LG + +L
Sbjct: 176 NVTNVC-VPQQVTVGKPI--SWISCGYYHSAFVTTEGQLYTFGEPECGKLG--LPNQLL- 229
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----DRAVDKMLFQE 274
+ P+ + + G V++A G H+ + E VY FG + LF+
Sbjct: 230 ----VNHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFET 283
Query: 275 G-----NHAR--RPSLISGGE-----------LYTWGSNENGCLGIGSIDVLHS--PERV 314
H + + S I+ GE +YT+G +G LG+G + + P
Sbjct: 284 SVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLC 343
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKI 341
F V VSCG HT + ++
Sbjct: 344 SN-FLRFIVQLVSCGGCHTLVFATPRL 369
Score = 244 (91.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 97/352 (27%), Positives = 153/352 (43%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + + +S FT KQ + G S
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEER-----STFHLIS-FFTSQRKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G +++ P+ + G + + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQIGLENVTNVC---------VPQQVTV--GKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISG--GEL--------------- 289
SA + G++Y FG+ K+ NH R P + G G++
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 290 ---YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
YT+G + G LG+G+ S + + + ++CG HTA I++ G + T+G
Sbjct: 261 KAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFG 320
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNHT 396
G HG LG N + PT+ NF + L VSCG HT
Sbjct: 321 -DGRHGKLG---------LGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCHT 361
Score = 231 (86.4 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 97/326 (29%), Positives = 150/326 (46%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FG+ +ENI P + + +V +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKF-WFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 71 SKST--VSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEE-- 126
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
RST + K+K +AG SA + E+G ++++GD + ++ + +
Sbjct: 127 ---RSTFHLISFFTSQR---KIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNV 180
Query: 279 RRP---------SLIS-G----------GELYTWGSNENGCLGI-GSIDVLHS-PERVQG 316
P S IS G G+LYT+G E G LG+ + V H P+ V G
Sbjct: 181 CVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPG 240
Query: 317 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHP 375
V QV+CG HT ++E + T+G G F GQLG G + + P
Sbjct: 241 --IPGKVVQVACGGGHTVVLTEKAVYTFGLG----QF--------GQLGLGTFLFETSVP 286
Query: 376 TIVNFGENVKALQVSCGFNHTGALLE 401
+ ++ K ++CG NHT + +
Sbjct: 287 KAIEHIKDQKISFIACGENHTALITD 312
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 277 (102.6 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 72/219 (32%), Positives = 114/219 (52%)
Query: 47 DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
D G++ + + RP+ + E + +ACG H++ L+ G ++ G N GQLG+
Sbjct: 93 DDGKVLIMDQSTVCRPL--KSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLR 150
Query: 107 ENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ + P + L + V QIS G +HS +++ G ++ WG NS GQLGLG + +
Sbjct: 151 KEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFV 210
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P T V+ L G T + G E + ++ GG V ++G+GG G+LGH L+
Sbjct: 211 P--TIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNS-------LKD-- 259
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFG 263
E+ PRLI EL G KV G H+ +E+ + +Y FG
Sbjct: 260 EHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFG 298
Score = 216 (81.1 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 64/207 (30%), Positives = 101/207 (48%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
E G V L D G++ I + PL+ S ++V+QI+ G HS A++ DG+L++W
Sbjct: 85 EAGAVL---LADDGKVLIMDQ-STVCRPLK-SLENRQVIQIACGDQHSMALSNDGQLFVW 139
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+N++GQLGL K+ A P ++ L I Q + G S ++ G V WG+ +G
Sbjct: 140 GENTHGQLGLRKEQAGT-QSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAG 198
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G + + P ++K L G K + G H+A + + G V+ FG
Sbjct: 199 QLGLGD---------TKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGF 249
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGS 294
++ P LI+ EL WGS
Sbjct: 250 GQLGHNSLKDEHHPRLIA--EL--WGS 272
Score = 187 (70.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 48/155 (30%), Positives = 78/155 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LGLG + R+ P + + +++CGG HT L++ G V+ G FGQ
Sbjct: 192 WGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ 251
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG ++ P I+ L +V Q++ G HH+ +L Y +G GQLG G++
Sbjct: 252 LG-HNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQ 310
Query: 161 AAKVIPIPTKV--ECLSGIFTKQAAL-GFEQSVAV 192
+ +P+P + EC FT + + G S A+
Sbjct: 311 VKQSVPLPVLLPTECTE--FTMEKLITGEHHSFAL 343
Score = 166 (63.5 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG +G+LGL ++ + P + + + ++ GG H+ L+ +G V+ G N
Sbjct: 138 VWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSA 197
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG+ + + + S K+ V IS G H++ ++ G ++ +G GQLG
Sbjct: 198 GQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLG--HN 255
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQE 214
+ K P + L G Q G ++ K++ S+G G G+LG+G++
Sbjct: 256 SLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQ 310
Score = 159 (61.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 55/209 (26%), Positives = 91/209 (43%)
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVY 260
+ G +G +E + LR +E ++ +L+ +++ G + + ++G+V
Sbjct: 40 SAGKSCIGFIREGKV-SVLRLHNEDADEKLEPLQLQNERIRSIVCGEAGAVLLADDGKVL 98
Query: 261 IFGDRAVDKMLFQEGNHA---------RRPSLISGGELYTWGSNENGCLGIGSIDV-LHS 310
I V + L N +L + G+L+ WG N +G LG+ S
Sbjct: 99 IMDQSTVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQS 158
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
P+ +Q E PV Q+S G H+ +S ++ +GWG + S GQLG G+
Sbjct: 159 PQHLQS-LCEIPVAQISAGGNHSFVLSLSGVV-FGWGSN----------SAGQLGLGDTK 206
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
D PTIV K + +SCG HT L
Sbjct: 207 DRFVPTIVKSLCGKKTVSISCGGEHTATL 235
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 45/123 (36%), Positives = 62/123 (50%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
GNH+ SL G ++ WGSN G LG+G P V+ + V +SCG +HTA
Sbjct: 177 GNHSFVLSL--SGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVS-ISCGGEHTA 233
Query: 335 AISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
+S+G + T+G GG F GQLGH + D HP ++ K QV+CG
Sbjct: 234 TLSKGGTVFTFGSGG----F--------GQLGHNSLKDEHHPRLIAELWGSKVSQVTCGR 281
Query: 394 NHT 396
+HT
Sbjct: 282 HHT 284
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 204 (76.9 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 56/164 (34%), Positives = 82/164 (50%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
++++ R WG+GD RLG G+ E+ P S+ ++ +ACG T+ LT +G
Sbjct: 433 ATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGH 492
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKN 150
V+ G GQLG S + G L L L E V+ I+ G HH + +T E++ WGK
Sbjct: 493 VFTMGGTAHGQLGNSISDG-KLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKG 551
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
+NG+LG G K PT VE L K + G F S+ +
Sbjct: 552 ANGRLGHGDTEDK--RTPTLVEALRDRHVKSLSCGSNFTSSICI 593
Score = 200 (75.5 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 66/273 (24%), Positives = 122/273 (44%)
Query: 9 MTKYYLKQDIKLGSKLGICK-RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
+T L+ ++ L +C R ++ ++ WG GRLG G RP +
Sbjct: 240 LTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEF 299
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK-- 123
++ +ACG HT ++ +G +++ G+++ G LG +I + + P R+SG +
Sbjct: 300 LALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWI-PKRVSGPLEGL 358
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V+ ++ G HS+ T +G+L+ +G + G LG G + + + P +V+ L+G+ T + A
Sbjct: 359 QVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKTVKVA 416
Query: 184 LGFEQSVAVT----------GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ A+ K+ +WG G RLGHG + + L P +
Sbjct: 417 CSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYL---------LPTCVS 467
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
L A G + + +G V+ G A
Sbjct: 468 SLIDYNFHKIACGHTFTVALTTSGHVFTMGGTA 500
Score = 194 (73.4 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 74/258 (28%), Positives = 114/258 (44%)
Query: 43 WGNG--DYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G + G LG GS S W P V E + ++ACG H+ T G ++ G
Sbjct: 327 WGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGA 386
Query: 100 FGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-VDGE---------LYMW 147
FG LG E++ Y E ++GLK V+++ H++AI V G+ L+ W
Sbjct: 387 FGVLGHGNRESVSYPKEVQSLNGLK--TVKVACSIWHTAAIVEVMGQTATSMSSRKLFTW 444
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G +LG G K ++P T V L + A G +VA+T G V + G G
Sbjct: 445 GDGDKNRLGHGNKETYLLP--TCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHG 502
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG+ L P L+++ L G V+ A G H A + V+ +G A
Sbjct: 503 QLGNSISDGKL----------PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGA 552
Query: 267 VDKMLFQEGNHARRPSLI 284
++ + R P+L+
Sbjct: 553 NGRLGHGDTEDKRTPTLV 570
Score = 158 (60.7 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 45/121 (37%), Positives = 63/121 (52%)
Query: 285 SGGELYTWGSN-EN-GCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTA-AISEGK 340
+ G+L++WG N G LG GS D+ H P+RV GP V V+CG H+A A + GK
Sbjct: 320 TSGDLFSWGDGIHNVGLLGHGS-DISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGK 378
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ T+G G F G LGHGN +P V +K ++V+C HT A++
Sbjct: 379 LFTFG----DGAF--------GVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIV 426
Query: 401 E 401
E
Sbjct: 427 E 427
Score = 139 (54.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 40/122 (32%), Positives = 65/122 (53%)
Query: 279 RRPSLISG-GELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
R +L++ GE++TWG G LG G +D+ P+ V+ + + +D V+CG HT +
Sbjct: 261 RHVALVTRQGEVFTWGEEVGGRLGHGIQVDISR-PKLVEF-LALTNIDFVACGEYHTCVV 318
Query: 337 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFN 394
S G + +WG DG + G LGHG+D+ + P V+ E ++ L V+CG
Sbjct: 319 STSGDLFSWG----------DGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTW 368
Query: 395 HT 396
H+
Sbjct: 369 HS 370
Score = 125 (49.1 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 37/124 (29%), Positives = 57/124 (45%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
H +L + G ++T G +G LG SI P VQ V++++CG H A +
Sbjct: 481 HTFTVALTTSGHVFTMGGTAHGQLG-NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVL 539
Query: 337 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
S ++ TWG G + G+LGHG+ D PT+V + +SCG N
Sbjct: 540 TSRSEVFTWGKGAN------------GRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNF 587
Query: 396 TGAL 399
T ++
Sbjct: 588 TSSI 591
Score = 122 (48.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 38/115 (33%), Positives = 56/115 (48%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW 344
+ G+L+T+G G LG G+ + + P+ VQ V +V+C HTAAI E T
Sbjct: 375 ANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTV-KVACSIWHTAAIVEVMGQTA 433
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
S F+ G +LGHGN Y+ PT V+ + +++CG T AL
Sbjct: 434 TSMSSRKLFTW-GDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVAL 487
Score = 110 (43.8 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 38/152 (25%), Positives = 64/152 (42%)
Query: 142 GELYMWGKN-SNGQLGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGG 196
G++Y+WG+ + G L G + + + P +E + Q G VT G
Sbjct: 211 GDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQG 270
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V +WG GRLGHG + I P+L++ L + A G H+ + +
Sbjct: 271 EVFTWGEEVGGRLGHGIQVDIS---------RPKLVEFLALTNIDFVACGEYHTCVVSTS 321
Query: 257 GRVYIFGDRAVDKMLFQEGNHARR--PSLISG 286
G ++ +GD + L G+ P +SG
Sbjct: 322 GDLFSWGDGIHNVGLLGHGSDISHWIPKRVSG 353
Score = 89 (36.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 342
+S +L+TWG + LG G+ + P V + +++CG T A++ G +
Sbjct: 436 MSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYN-FHKIACGHTFTVALTTSGHVF 494
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
T G G +HG G + G + +V GE V+ +++CG +H L
Sbjct: 495 TMG-GTAHGQL-------GNSISDGKLPCLVQDRLV--GEFVE--EIACGAHHVAVL 539
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 198 (74.8 bits), Expect = 9.9e-21, Sum P(2) = 9.9e-21
Identities = 66/195 (33%), Positives = 102/195 (52%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK---EVVQIST 130
++CG AH+L LT+ V++ G N +GQ G + EN YS E +++ ++ +VVQ+
Sbjct: 180 VSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYS-ESHKVNRMQDFDGQVVQVVC 238
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQS 189
G HS +T GE+Y G ++GQ GLG + +PTK+ L+G+ Q A +
Sbjct: 239 GQDHSLFLTDKGEVYSCGWGADGQTGLGHY--DITSVPTKLGGDLAGVNVVQVATYGDCC 296
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFL 248
+AV+ G + WG S L Q +S+ ST PR + GV KVK AA G
Sbjct: 297 LAVSAEGGLFGWG--NSEYL---QLASVTD---STQVNVPRCLP-FSGVGKVKQAACGGT 347
Query: 249 HSACIDENGRVYIFG 263
A ++ G V+++G
Sbjct: 348 GCAVLNGEGHVFVWG 362
Score = 161 (61.7 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 66/234 (28%), Positives = 104/234 (44%)
Query: 44 GNGDYGRLGLGSLE----SRWRPVV-CSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
GN YG+ G +E S V F+ ++ + CG H+LFLT+ G VY+ G
Sbjct: 200 GNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQVV-CGQDHSLFLTDKGEVYSCGWG 258
Query: 99 DFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ G+ + + P ++ G VVQ++T A++ +G L+ WG + QL
Sbjct: 259 ADGQTGLG-HYDITSVPTKLGGDLAGVNVVQVATYGDCCLAVSAEGGLFGWGNSEYLQLA 317
Query: 157 LGKKAAKVIPIPTKVECL--SGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ +V +P CL SG+ KQAA G + G G V WG G G+ +
Sbjct: 318 SVTDSTQV-NVP---RCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLV 373
Query: 214 ESSILGFLRST----SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E++ + T +E+ P GV V G H A + G ++++G
Sbjct: 374 ETAFPEVIPPTLFGLTEFNP-------GVHVSHIWCGLSHFAALTSKGELFVWG 420
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 39/131 (29%), Positives = 58/131 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K ACGG L G V+ G G
Sbjct: 308 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILG 367
Query: 102 Q-LGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ + E + P + GL + V I G H +A+T GEL++WGKN G L
Sbjct: 368 KGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCL 427
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 428 GIGRLEDQYFP 438
Score = 115 (45.5 bits), Expect = 9.9e-21, Sum P(2) = 9.9e-21
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+L S GEL+ WG N GCLGIG ++ + P RV P E PVD V+CG H +++
Sbjct: 409 ALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP-GE-PVD-VACGVDHMVTLAK 462
Score = 114 (45.2 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 51/178 (28%), Positives = 76/178 (42%)
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFGQLGI-----SENIG 110
R +PV + + ACG TL ++T V + GLN QLG + G
Sbjct: 96 RIQPVPYRLELDQKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSHKDKTRG 155
Query: 111 YS--LEPLRIS-GLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
Y LEP + L + V+Q+S G HS +T ++ G N+ GQ G +
Sbjct: 156 YEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENE 215
Query: 164 VIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLS--WGAGGSGRLGHGQESSI 217
+ KV + + Q G + S+ +T G+V S WGA G LGH +S+
Sbjct: 216 IYSESHKVNRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSV 273
Score = 73 (30.8 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 32/119 (26%), Positives = 48/119 (40%)
Query: 287 GELYTWGSNENGCLG-IGSIDVLHSPERVQGPFSE-SPVDQVSCGWKHTAAIS-EGKILT 343
G L+ WG++E L + ++ P + PFS V Q +CG A ++ EG +
Sbjct: 303 GGLFGWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGKVKQAACGGTGCAVLNGEGHVFV 360
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI---VNFGENVKALQVSCGFNHTGAL 399
WG+G G L + I PT+ F V + CG +H AL
Sbjct: 361 WGYGIL---------GKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAAL 410
Score = 63 (27.2 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 35/125 (28%), Positives = 53/125 (42%)
Query: 282 SLISG-GELYTWGSNENGCLGIGS--IDVLHS---PERVQGPFSESP---VDQVSCGWKH 332
++++G G ++ WG G LG G ++ P + G +P V + CG H
Sbjct: 350 AVLNGEGHVFVWGY---GILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSH 406
Query: 333 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVS 390
AA+ S+G++ WG + G LG G D P V GE V V+
Sbjct: 407 FAALTSKGELFVWG------------KNIRGCLGIGRLEDQYFPWRVTMPGEPV---DVA 451
Query: 391 CGFNH 395
CG +H
Sbjct: 452 CGVDH 456
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 192 (72.6 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 68/244 (27%), Positives = 109/244 (44%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E + +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 375 GALLPGAVEQQ-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLG 433
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
S +P + L E+VQ++ G H A++ + EL+ WG+ G+LGLG + +
Sbjct: 434 HGSLNDIS-QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH 492
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG-----GSGRLGHGQESSIL 218
P +V G ++ G + S+ +T G+ L+ G+ G RL G+E +
Sbjct: 493 --SCPQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPN 550
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +TP + + G HSA + +G Y FG ++ G +A
Sbjct: 551 QQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQL----GTNA 606
Query: 279 RRPS 282
RR S
Sbjct: 607 RRVS 610
Score = 185 (70.2 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 71/270 (26%), Positives = 116/270 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG GSL +P + A + + +ACG +H L L+ ++A G D G+
Sbjct: 424 FGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGR 483
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ +S P ++S +E ++ G S +TV G G N +LGL + +
Sbjct: 484 LGLGTRESHSC-PQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLS 542
Query: 162 AKVIPIPTKV--ECLS----GI--FTKQAAL----GFEQSVAVTGGGKVLSWGAGGSGRL 209
P P + E LS G F ++ L G S AVT G ++G+ G+L
Sbjct: 543 LGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQL 602
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G R S P ++ L+ +K+ + A G + + G VY +G A +
Sbjct: 603 GTNA--------RRVSR-APCQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGR 653
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGC 299
L + A P + E++ + C
Sbjct: 654 -LGRRDEDAGLPRPVQLDEIHPYTVTSVSC 682
Score = 128 (50.1 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
A ++ + G+ YT+GSN++G LG + V +P +VQG + V+CG T A+
Sbjct: 580 AHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG-LQNIKIAMVACGDAFTVAVG 638
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+EG++ +WG G+ G +G L +D IHP V
Sbjct: 639 AEGEVYSWG-KGARGRLGRRDEDAG--LPRPVQLDEIHPYTV 677
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L G + T+GS NGCLG GS++ + P V+ V QV+CG H A+S E ++
Sbjct: 415 LTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMV-QVACGASHVLALSTEREL 473
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
WG G GG+LG G + P V+ +A +V CG +
Sbjct: 474 FAWGRG------------DGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGID 514
Score = 124 (48.7 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 41/154 (26%), Positives = 69/154 (44%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---LGKKAAKVIP--IPT 169
PLR+ L EVVQ++ G + +T G L +W G G L + P +
Sbjct: 333 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSR 392
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+E SG+ K A G + +T G ++++G+G +G LGHG L S+ P
Sbjct: 393 FLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS-------LNDISQ--P 443
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+++ L G ++ A G H + ++ +G
Sbjct: 444 TIVEALLGYEMVQVACGASHVLALSTERELFAWG 477
Score = 63 (27.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 26/84 (30%), Positives = 36/84 (42%)
Query: 317 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDVDYIHP 375
PF P+ V G H+AA++ G TF + H GQLG + V P
Sbjct: 566 PFDREPLLSVDLGTAHSAAVTAS--------GDCYTFGSNQH---GQLGTNARRVSRA-P 613
Query: 376 TIVNFGENVKALQVSCGFNHTGAL 399
V +N+K V+CG T A+
Sbjct: 614 CQVQGLQNIKIAMVACGDAFTVAV 637
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 272 (100.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 98/334 (29%), Positives = 155/334 (46%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGY 132
+A+ACG H L L+ +G + A G N FGQ G+ + + + L ++ G + +I+ G
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHS--FRIANLHQVDGDWPAIEKIACGQ 836
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSV 190
HS+ I DG L+ +G GQLG G + +PT+V +G+ K Q A G +V
Sbjct: 837 FHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRV---NGLICKVTQIACGRAHTV 893
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T G+VL G+G G++G + ++ +TP + L +V+ A + HS
Sbjct: 894 VLTDTGRVLVCGSGSYGQMGVDDD------IKKVFAFTPLPLGPL---RVRDIATHYYHS 944
Query: 251 ACIDENGRVYIFGDRAVD-KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV-L 308
CI E+ RV+ +G + KM R L + + + + NG ++++
Sbjct: 945 ICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPA 1004
Query: 309 HSPERVQG-----PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 362
P G F + + V+CG H+A I SEG + TWG G +
Sbjct: 1005 EIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDY------------ 1052
Query: 363 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
QLGHGN + + P V K + VS G NHT
Sbjct: 1053 QLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHT 1086
Score = 170 (64.9 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+ G+G R + + +++ +ACG H+ F+ G ++ G +GQ
Sbjct: 800 WGGNRFGQCGVGH-SFRIANLHQVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQ 858
Query: 103 LGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N L P R++GL +V QI+ G H+ +T G + + G S GQ+G+
Sbjct: 859 LGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDI 918
Query: 162 AKVI---PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
KV P+P L + + A + S+ +T +V WG
Sbjct: 919 KKVFAFTPLP-----LGPLRVRDIATHYYHSICITEDNRVFEWG 957
Score = 162 (62.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 41/116 (35%), Positives = 64/116 (55%)
Query: 41 ALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATG 96
+LW G G +G+LG G + +V + K +ACG AHT+ LT+TG V G
Sbjct: 847 SLWTFGWGVWGQLGHGGRNNS-NQLVPTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCG 905
Query: 97 LNDFGQLGISENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+GQ+G+ ++I ++ PL + L+ V I+T Y+HS IT D ++ WG+N
Sbjct: 906 SGSYGQMGVDDDIKKVFAFTPLPLGPLR--VRDIATHYYHSICITEDNRVFEWGRN 959
Score = 147 (56.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 42/122 (34%), Positives = 63/122 (51%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L S G+L WG N G G+G + + +V G + +++++CG H+A I S+G +
Sbjct: 791 LSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPA--IEKIACGQFHSAFICSDGSL 848
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
T+GWG GQLGHG N+ + + PT VN G K Q++CG HT L
Sbjct: 849 WTFGWG------------VWGQLGHGGRNNSNQLVPTRVN-GLICKVTQIACGRAHTVVL 895
Query: 400 LE 401
+
Sbjct: 896 TD 897
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L +V ++ G HS+ IT +G LY WGK + QLG G K ++ P +V +G
Sbjct: 1020 LDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEP--HQVFEPNGAKWV 1077
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+LG ++A T G V +WG G+ G
Sbjct: 1078 NVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 35/94 (37%), Positives = 53/94 (56%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLN-DFGQLGISENIGYSLEPLRI---SGLKKEVVQ 127
++ ++ACG +H+ +T G +Y G D+ QLG N +EP ++ +G K V
Sbjct: 1023 NIVSVACGLSHSALITSEGTLYTWGKGLDY-QLGHG-NKNERMEPHQVFEPNGAKW--VN 1078
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKK 160
+S G +H+ A T DG ++ WGKN GQ G L KK
Sbjct: 1079 VSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKK 1112
Score = 87 (35.7 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKI 341
+ S G LYTWG + LG G+ + P +V P V+ VS G HT A+ +G +
Sbjct: 1037 ITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVN-VSLGNNHTIASTDDGSV 1095
Query: 342 LTWGWG--GSHGTFSE-DGHSS 360
WG G G ++ +G+S+
Sbjct: 1096 FAWGKNDFGQCGVLTKKNGNSA 1117
Score = 75 (31.5 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G S +T G + +WG G +LGHG ++ + P + E G K
Sbjct: 1028 ACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERM---------EPHQVFEPNGAKWVN 1078
Query: 243 AAAGFLHSACIDENGRVYIFG 263
+ G H+ ++G V+ +G
Sbjct: 1079 VSLGNNHTIASTDDGSVFAWG 1099
Score = 46 (21.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQ 154
++ G + + IT D L +WG +N Q
Sbjct: 705 LAGGNNCGATITEDDRLMIWGNFTNAQ 731
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 197 (74.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 66/195 (33%), Positives = 101/195 (51%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK---EVVQIST 130
++CG AH+L LT+ V++ G N +GQ G + EN YS E R+ ++ +VVQ++
Sbjct: 179 VSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYS-ESHRVHRMQDFDGQVVQVAC 237
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQS 189
G HS +T GE+Y G ++GQ GLG + PTK+ L+G+ Q A +
Sbjct: 238 GQDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSSPTKLGGDLAGVNVIQVATYGDCC 295
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFL 248
+AV+ G + WG S L Q +S+ ST PR + GV KV+ AA G
Sbjct: 296 LAVSADGGLFGWG--NSEYL---QLASVTD---STQVNVPRCL-HFSGVGKVRQAACGGT 346
Query: 249 HSACIDENGRVYIFG 263
A ++ G V+++G
Sbjct: 347 GCAVLNGEGHVFVWG 361
Score = 179 (68.1 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 69/251 (27%), Positives = 111/251 (44%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK-------ALAC 78
C R S L R GN YG+ G +E+ + + H ++ +AC
Sbjct: 181 CGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENE---IYSESHRVHRMQDFDGQVVQVAC 237
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISG--LKKEVVQISTGYHHS 135
G H+LFLT+ G VY+ G GQ G+ NI S P ++ G V+Q++T
Sbjct: 238 GQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSS--PTKLGGDLAGVNVIQVATYGDCC 295
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIF-TKQAALGFEQSVAV 192
A++ DG L+ WG + QL + +V +P CL SG+ +QAA G +
Sbjct: 296 LAVSADGGLFGWGNSEYLQLASVTDSTQV-NVP---RCLHFSGVGKVRQAACGGTGCAVL 351
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G G V WG G G+ + ES++ + T E++ +++ G H A
Sbjct: 352 NGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIR---CGLSHFAA 408
Query: 253 IDENGRVYIFG 263
+ G ++++G
Sbjct: 409 LTNKGELFVWG 419
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/134 (31%), Positives = 62/134 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F ++ ACGG L G V+ G +G
Sbjct: 307 WGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWG---YG 363
Query: 102 QLGISENIGYSLEPLRIS----GLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSN 152
LG N+ S P I GL + +V +I G H +A+T GEL++WGKN
Sbjct: 364 ILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIR 423
Query: 153 GQLGLGKKAAKVIP 166
G LG+G+ + P
Sbjct: 424 GCLGIGRLEDQYFP 437
Score = 123 (48.4 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 52/172 (30%), Positives = 75/172 (43%)
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFGQLGI-----SENIG 110
R +PV + + ACG TL ++T V + GLN QLG + G
Sbjct: 95 RIQPVPYRLELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRG 154
Query: 111 YS--LEPLRIS-GLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
Y LEP +S L + V+Q+S G HS +T ++ G NS GQ G +
Sbjct: 155 YEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENE 214
Query: 164 VIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLS--WGAGGSGRLGH 211
+ +V + + Q A G + S+ +T G+V S WGA G LGH
Sbjct: 215 IYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGH 266
Score = 113 (44.8 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
+L + GEL+ WG N GCLGIG ++ + P RV P E PVD V+CG H +++ I
Sbjct: 408 ALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP-GE-PVD-VACGVDHMVTLAKSFI 464
Score = 75 (31.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L GE+Y+ G +G G+G ++ SP ++ G + V QV+ A+S +G +
Sbjct: 245 LTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGL 304
Query: 342 LTWGWGGS 349
+GWG S
Sbjct: 305 --FGWGNS 310
Score = 71 (30.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 30/119 (25%), Positives = 49/119 (41%)
Query: 287 GELYTWGSNENGCLG-IGSIDVLHSPERVQGPFSE-SPVDQVSCGWKHTAAIS-EGKILT 343
G L+ WG++E L + ++ P + FS V Q +CG A ++ EG +
Sbjct: 302 GGLFGWGNSEYLQLASVTDSTQVNVPRCLH--FSGVGKVRQAACGGTGCAVLNGEGHVFV 359
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI---VNFGENVKALQVSCGFNHTGAL 399
WG+G G L + I PT+ F ++ ++ CG +H AL
Sbjct: 360 WGYGIL---------GKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAAL 409
Score = 68 (29.0 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 282 SLISG-GELYTWGSNENGCLGIGSIDVLHS--PERVQ----GPFSESPVDQVS---CGWK 331
++++G G ++ WG G LG G +++ S PE + G +P QVS CG
Sbjct: 349 AVLNGEGHVFVWGY---GILGKGP-NLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQV 389
H AA++ +G++ WG + G LG G D P V GE V V
Sbjct: 405 HFAALTNKGELFVWG------------KNIRGCLGIGRLEDQYFPWRVTMPGEPV---DV 449
Query: 390 SCGFNH 395
+CG +H
Sbjct: 450 ACGVDH 455
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 261 (96.9 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 92/306 (30%), Positives = 143/306 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E + P S F + +K++ GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+ G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLGL----GHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGHGQE 214
K + +P +ECL AA G ++A T G V WG G SGR L GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------DRA 266
+ FL + P + LE A AG HSA + + G +Y++G RA
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRA 248
Query: 267 VDKMLFQ--EGNHAR--RPSLISGGELYTWGSNENGCLGI-GSIDVLHSPERVQGPFSES 321
V L Q E ++ + + + + G + E G + G D R++ P ++
Sbjct: 249 VFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQK 308
Query: 322 PVDQVS 327
PV+Q S
Sbjct: 309 PVEQDS 314
Score = 170 (64.9 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 54/176 (30%), Positives = 89/176 (50%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S + + ++ G HS+ +T G+L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLGH-TEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G HG ++ P+ I+ L KV AAG H+ G V+ +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLRE-KVVCVAAGLRHALATTATGSVFQWG 178
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 51/175 (29%), Positives = 78/175 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG- 120
P + E + G H+ LT+TG +Y G N GQL S + L P RI
Sbjct: 203 PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPL-PQRIEAH 260
Query: 121 --LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---KKAAKVI---------- 165
++V + +G+ H A T G+++ WG+ GQLG +A K +
Sbjct: 261 YFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQG 320
Query: 166 P---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P +P+ + CL+G + + G E ++AV K SWG G G G ES++
Sbjct: 321 PQNSVPSPLHCLTG--ATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNV 372
Score = 137 (53.3 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 40/136 (29%), Positives = 57/136 (41%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S ++ L+ WG NS GQLGLG K +P C +G K G S VT
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKM 270
E G+V G A ++
Sbjct: 118 EKGQVLSCGSNAFGQL 133
Score = 122 (48.0 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-G 339
SL GELY WG N++G L ++ L P+R++ F + V V GW H A +E G
Sbjct: 226 SLTDTGELYVWGRNKHGQLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETG 284
Query: 340 KILTWG 345
K+ TWG
Sbjct: 285 KVFTWG 290
Score = 82 (33.9 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 34/130 (26%), Positives = 54/130 (41%)
Query: 287 GELYTWGSNENGCLG--IGSIDVLHSPER-----VQGPFSESP--------VDQVSCGWK 331
G+++TWG + G LG + + E+ QGP + P ++SCG +
Sbjct: 284 GKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSE 343
Query: 332 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
H A+ K +WGW HG DG S + V + P+ + L V C
Sbjct: 344 HNLAVIRDKCCSWGWN-EHGMCG-DGTESN--VWTPTPVQALPPS------PSRLLLVGC 393
Query: 392 GFNHTGALLE 401
G H+ A+ +
Sbjct: 394 GAGHSLAVCQ 403
Score = 55 (24.4 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 287 GELYTWGSN--ENG---CLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
G ++ WG+ +G C G + P RV G + + V V+ G H+A++++
Sbjct: 172 GSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTDT 230
Query: 339 GKILTWGWGGSHG 351
G++ WG HG
Sbjct: 231 GELYVWG-RNKHG 242
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 257 (95.5 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 95/356 (26%), Positives = 156/356 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E + V A E +++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P + L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + I IP + C + +Q A G SV +T G V +WG
Sbjct: 130 DETGRPVRRDIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPP------- 180
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD---------- 264
G ++ S P ++ LE V+ + A G H+ + E+G ++ +G+
Sbjct: 181 ----GDIKQIS--VPVRVQGLENVR--LIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 265 ----------RAVDKMLFQE----GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS 310
+ +D + + G H+ +L + GE+Y WG E+G LG G D
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHST--ALTNEGEVYGWGRGEHGRLGFGDNDKSSK 290
Query: 311 --PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
P++V E + QVSCG H+ A++ +G+I ++G G HG + GQ
Sbjct: 291 MLPQKVNLLAGEDII-QVSCGGTHSVALTRDGRIFSFG-RGDHGRLGYGRKVTTGQ 344
Score = 251 (93.4 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 73/231 (31%), Positives = 109/231 (47%)
Query: 40 AALWGNGDYGRLGLG-SLESRWRPV----VCS--AFEKHSLKALACGGAHTLFLTETGCV 92
A WG +YG+ G S + RPV V ++ +++ +A GG H++ LT G V
Sbjct: 112 AYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYV 171
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ +GQ +I P+R+ GL+ V I+ G H+ A+ DG L+ WG N
Sbjct: 172 WT-----WGQPWPPGDIKQISVPVRVQGLEN-VRLIAVGAFHNLALKEDGTLWAWGNNEY 225
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG G + PIP V+ L + A G S A+T G+V WG G GRLG G
Sbjct: 226 GQLGTGDTQPRSYPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFG 283
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+S+ P+ + L G + + G HS + +GR++ FG
Sbjct: 284 DNDK-------SSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG 327
Score = 251 (93.4 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 100/331 (30%), Positives = 147/331 (44%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
V A G + GQLG+ + L + + L+ V + G +S AI DG+L+ WG N
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASV-VDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G LG + K P+ V+ L+ + QAA+G +AV G+ +WG G+ G
Sbjct: 66 QRGTLGHPPET-KTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 211 HGQESSILGF-LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----- 264
G +R R ++L V+ AAG HS + G V+ +G
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAQQLT---VRQVAAGGTHSVVLTREGYVWTWGQPWPPG 181
Query: 265 --RAVDKMLFQEG-NHAR--------RPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + + +G + R +L G L+ WG+NE G LG G P
Sbjct: 182 DIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIP 241
Query: 314 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTFSEDGHSSGGQLGHG-NDVD 371
VQG + VD + GW TA +EG++ +GWG G HG +LG G ND
Sbjct: 242 VQGLDDLTLVDIAAGGWHSTALTNEGEV--YGWGRGEHG-----------RLGFGDNDKS 288
Query: 372 Y-IHPTIVNF--GENVKALQVSCGFNHTGAL 399
+ P VN GE++ +QVSCG H+ AL
Sbjct: 289 SKMLPQKVNLLAGEDI--IQVSCGGTHSVAL 317
Score = 214 (80.4 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 45/127 (35%), Positives = 72/127 (56%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R P+ + +L +A GG H+ LT G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P +++ L E ++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIPI 167
P+
Sbjct: 340 VTTGQPL 346
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 42/130 (32%), Positives = 66/130 (50%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAIS-E 338
+L + GE+Y WG E+G LG G D P++V E + QVSCG H+ A++ +
Sbjct: 262 ALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDII-QVSCGGTHSVALTRD 320
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQ-LG---HGNDVD--YIHPTIVNFGENVKALQVSCG 392
G+I ++G G HG + GQ L H + + H + G+ + A V+CG
Sbjct: 321 GRIFSFG-RGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWI-AKHVACG 378
Query: 393 FNHTGALLEY 402
HT A++E+
Sbjct: 379 GRHTLAIVEW 388
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 196 (74.1 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 65/194 (33%), Positives = 98/194 (50%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKEVVQISTG 131
++CG AH+L LT+ V++ G N +GQ G + EN YS R+ +VVQ++ G
Sbjct: 185 VSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQVACG 244
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSV 190
HS +T GE+Y G ++GQ GLG + PTK+ L+G+ Q A + +
Sbjct: 245 QDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSAPTKLGGDLAGVNVVQVATYGDCCL 302
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLH 249
AV+ G + WG S L Q +S+ ST PR + GV +VK AA G
Sbjct: 303 AVSADGSLFGWG--NSEYL---QLASVTD---STQVNVPRCLP-FSGVGQVKQAACGGTG 353
Query: 250 SACIDENGRVYIFG 263
A ++ G V+++G
Sbjct: 354 CAVLNGEGHVFVWG 367
Score = 184 (69.8 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 67/233 (28%), Positives = 107/233 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK-------ALACGGAHTLFLTETGCVYATG 96
GN YG+ G +E+ + + + H ++ +ACG H+LFLT+ G VY+ G
Sbjct: 205 GNNSYGQCGRKVVENE---IYSESHKVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCG 261
Query: 97 LNDFGQLGISE-NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
GQ G+ NI + P ++ G VVQ++T A++ DG L+ WG +
Sbjct: 262 WGADGQTGLGHYNI--TSAPTKLGGDLAGVNVVQVATYGDCCLAVSADGSLFGWGNSEYL 319
Query: 154 QLGLGKKAAKVIPIPTKVECL--SGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
QL + +V +P CL SG+ KQAA G + G G V WG G G+
Sbjct: 320 QLASVTDSTQV-NVP---RCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGP 375
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ E+++ + T L E V+V G H A + + G ++++G
Sbjct: 376 NLVETALPEMIPPTLFGLTELNPE---VRVSRIRCGLSHFAALTDRGELFVWG 425
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 39/131 (29%), Positives = 59/131 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K ACGG L G V+ G G
Sbjct: 313 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILG 372
Query: 102 Q-LGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ + E + P + GL + V +I G H +A+T GEL++WGKN G L
Sbjct: 373 KGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDRGELFVWGKNIRGCL 432
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 433 GIGRLEDQYFP 443
Score = 128 (50.1 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 52/159 (32%), Positives = 74/159 (46%)
Query: 73 LKALACGGAHTLFLTETGCV---YATGLNDFGQLGI-----SENIGYS--LEPLRIS-GL 121
+ + ACG TL ++T V + GLN QLG + GY LEP + L
Sbjct: 115 ISSAACGYGFTLLSSKTRDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPL 174
Query: 122 KK----EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ +V+Q+S G HS +T DGE ++ G NS GQ G ++ KV +
Sbjct: 175 HRPQETQVLQVSCGRAHSLVLT-DGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQD 233
Query: 177 IFTK--QAALGFEQSVAVTGGGKVLS--WGAGGSGRLGH 211
+ Q A G + S+ +T G+V S WGA G LGH
Sbjct: 234 FDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGH 272
Score = 111 (44.1 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+L GEL+ WG N GCLGIG ++ + P RV P E PVD V+CG H +++
Sbjct: 414 ALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP-GE-PVD-VACGVDHMVTLAK 467
Score = 78 (32.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 32/121 (26%), Positives = 51/121 (42%)
Query: 287 GELYTWGSNENGCLG-IGSIDVLHSPERVQGPFSE-SPVDQVSCGWKHTAAIS-EGKILT 343
G L+ WG++E L + ++ P + PFS V Q +CG A ++ EG +
Sbjct: 308 GSLFGWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGQVKQAACGGTGCAVLNGEGHVFV 365
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE---NVKALQVSCGFNHTGALL 400
WG+G G L + I PT+ E V+ ++ CG +H AL
Sbjct: 366 WGYGIL---------GKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALT 416
Query: 401 E 401
+
Sbjct: 417 D 417
Score = 66 (28.3 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 282 SLISG-GELYTWGSNENGCLGIG-SIDVLHSPERVQ----GPFSESP---VDQVSCGWKH 332
++++G G ++ WG G LG G ++ PE + G +P V ++ CG H
Sbjct: 355 AVLNGEGHVFVWGY---GILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSH 411
Query: 333 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVS 390
AA+++ G++ WG + G LG G D P V GE V V+
Sbjct: 412 FAALTDRGELFVWG------------KNIRGCLGIGRLEDQYFPWRVTMPGEPV---DVA 456
Query: 391 CGFNH 395
CG +H
Sbjct: 457 CGVDH 461
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 250 (93.1 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 94/324 (29%), Positives = 145/324 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLND 99
WG GRLG G + + P +V S S+ +ACG HT +T G +Y G ++
Sbjct: 305 WGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN 364
Query: 100 FGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G LG +I + + P RI+G + V +S G H++ IT G L+ +G + G LG
Sbjct: 365 VGLLGHGSDISHWI-PKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGH 423
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
G K + + P +VE LSG+ T + G + AV GK+ +WG G
Sbjct: 424 GDK--ETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGD 481
Query: 206 SGRLGHGQESSILG--FLRSTSEYTPRLIKELEGVKVKIAAAG--F-LHSACIDENGRVY 260
RLGHG + L + + +Y I + V + +G F + S + G +
Sbjct: 482 KNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQ 541
Query: 261 IFG-------DRAVDKMLFQEGNHARR-PSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
G D+ + + + A +L S E+YTWG NG LG G ++ P
Sbjct: 542 TDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPT 601
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI 336
V+ + V ++CG +TAAI
Sbjct: 602 IVEA-LKDRHVKYIACGSNYTAAI 624
Score = 186 (70.5 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 53/185 (28%), Positives = 87/185 (47%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLK--KEVVQISTGY 132
+ACG H F+T G ++ G G+LG IG + P + L V ++ G
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLG--HGIGKDVFHPRLVESLTATSSVDFVACGE 343
Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
H+ A+T+ GELY WG ++ G LG G + IP L G+ + G +
Sbjct: 344 FHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIP-KRIAGSLEGLHVASVSCGPWHTA 402
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T G++ ++G G G LGHG + ++ +Y PR ++ L G++ + G H+
Sbjct: 403 LITSYGRLFTFGDGTFGVLGHGDKETV--------QY-PREVESLSGLRTIAVSCGVWHT 453
Query: 251 ACIDE 255
A + E
Sbjct: 454 AAVVE 458
Score = 183 (69.5 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 53/155 (34%), Positives = 79/155 (50%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V QI+ G H++ +T GE++ WG+ S G+LG G K + P VE
Sbjct: 273 KPLE-SNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHG--IGKDVFHPRLVES 329
Query: 174 LSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTP- 229
L+ + A G + AVT G++ +WG G G LGHG + S + P
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSD---------ISHWIPK 380
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
R+ LEG+ V + G H+A I GR++ FGD
Sbjct: 381 RIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGD 415
Score = 170 (64.9 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 287 GELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
GE++TWG G LG G DV H P V+ + S VD V+CG HT A++ G++ TW
Sbjct: 300 GEIFTWGEESGGRLGHGIGKDVFH-PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTW 358
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGFNHTGALLEY 402
G DG + G LGHG+D+ + P I E + VSCG HT + Y
Sbjct: 359 G----------DGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSY 407
Score = 167 (63.8 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 48/121 (39%), Positives = 63/121 (52%)
Query: 287 GELYTWGSNEN--GCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 342
GELYTWG + G LG GS D+ H P+R+ G V VSCG HTA I S G++
Sbjct: 353 GELYTWGDGTHNVGLLGHGS-DISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLF 411
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
T+G GTF G LGHG+ +P V ++ + VSCG HT A++E
Sbjct: 412 TFG----DGTF--------GVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459
Query: 403 V 403
+
Sbjct: 460 I 460
Score = 143 (55.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 67/245 (27%), Positives = 103/245 (42%)
Query: 129 STGYHHSSAITVD--GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIF 178
S+ H S+A D G++Y+WG+ ++ ++G+ K A+ + + +P +E +
Sbjct: 223 SSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLD 282
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q A G + VT G++ +WG GRLGHG + + PRL++ L
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDV---------FHPRLVESLTAT 333
Query: 239 K-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISG--------- 286
V A G H+ + G +Y +GD + L G+ P I+G
Sbjct: 334 SSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVAS 393
Query: 287 ---GELYTWGSNENGCL---GIGSIDVL-HSP-ERVQGPFSESPVD-----QVSCGWKHT 333
G +T G L G G+ VL H E VQ P + VSCG HT
Sbjct: 394 VSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHT 453
Query: 334 AAISE 338
AA+ E
Sbjct: 454 AAVVE 458
Score = 133 (51.9 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
H+ L + G+++T GS G LG D P V+ + V+++SCG H AA+
Sbjct: 514 HSLTVGLTTSGQVFTMGSTVYGQLGNLQTDG-KLPCLVEDKLASEFVEEISCGAYHVAAL 572
Query: 337 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
S ++ TWG G + G+LGHG+ D PTIV ++ ++CG N+
Sbjct: 573 TSRNEVYTWGKGAN------------GRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNY 620
Query: 396 TGAL 399
T A+
Sbjct: 621 TAAI 624
Score = 108 (43.1 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 37/119 (31%), Positives = 53/119 (44%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 342
+ S G L+T+G G LG G + + P V+ S VSCG HTAA+ E I+
Sbjct: 404 ITSYGRLFTFGDGTFGVLGHGDKETVQYPREVES-LSGLRTIAVSCGVWHTAAVVE-IIV 461
Query: 343 TWGWGGS--HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
T S G G +LGHG+ + PT V + +++CG + T L
Sbjct: 462 TQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGL 520
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 197 (74.4 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 66/195 (33%), Positives = 101/195 (51%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK---EVVQIST 130
++CG AH+L LT+ V++ G N +GQ G + EN YS E R+ ++ +VVQ++
Sbjct: 179 VSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYS-ESHRVHRMQDFDGQVVQVAC 237
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQS 189
G HS +T GE+Y G ++GQ GLG + PTK+ L+G+ Q A +
Sbjct: 238 GQDHSLFLTDQGEVYSCGWGADGQTGLGHY--NITSTPTKLGGDLAGVNVVQVATYGDCC 295
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFL 248
+AV+ G + WG S L Q +S+ ST PR + GV +VK AA G
Sbjct: 296 LAVSADGGLFGWG--NSEYL---QLASVTD---STQVNVPRCLP-FSGVGQVKQAACGGT 346
Query: 249 HSACIDENGRVYIFG 263
A ++ G V+++G
Sbjct: 347 GCAVLNGEGHVFVWG 361
Score = 185 (70.2 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 69/237 (29%), Positives = 108/237 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK-------ALACGGAHTLFLTETGCVYATG 96
GN YG+ G +E+ + + H ++ +ACG H+LFLT+ G VY+ G
Sbjct: 199 GNNSYGQCGRKVVENE---IYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDQGEVYSCG 255
Query: 97 LNDFGQLGISE-NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
GQ G+ NI + P ++ G VVQ++T A++ DG L+ WG +
Sbjct: 256 WGADGQTGLGHYNI--TSTPTKLGGDLAGVNVVQVATYGDCCLAVSADGGLFGWGNSEYL 313
Query: 154 QLGLGKKAAKVIPIPTKVECL--SGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
QL + +V +P CL SG+ KQAA G + G G V WG G G+
Sbjct: 314 QLASVTDSTQV-NVP---RCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGP 369
Query: 211 HGQESSILGFLRST----SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ E+++ + T SE+ P GV+V G H A + G ++++G
Sbjct: 370 NLLETALPEMIPPTLFGLSEFNP-------GVQVSRIRCGLSHFAALTNRGELFVWG 419
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K ACGG L G V+ G G
Sbjct: 307 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILG 366
Query: 102 Q-LGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ + E + P + GL + +V +I G H +A+T GEL++WGKN G L
Sbjct: 367 KGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCL 426
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 427 GIGRLEDQYFP 437
Score = 129 (50.5 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 58/188 (30%), Positives = 82/188 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC---VYATGLNDF 100
G+G R G R +PV + + ACG TL ++T V+ GLN
Sbjct: 81 GSGPQPRAG-SRPRRRIQPVPYRLELDQKISSAACGYGFTLLSSKTKDITKVWGMGLNKD 139
Query: 101 GQLGI-----SENIGYS--LEPLRIS-GLKK----EVVQISTGYHHSSAITVDGE-LYMW 147
QLG + GY LEP + L + V+Q+S G HS +T DGE ++
Sbjct: 140 SQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLVLT-DGEGVFSM 198
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLS--WGA 203
G NS GQ G ++ +V + + Q A G + S+ +T G+V S WGA
Sbjct: 199 GNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDQGEVYSCGWGA 258
Query: 204 GGSGRLGH 211
G LGH
Sbjct: 259 DGQTGLGH 266
Score = 109 (43.4 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
+L + GEL+ WG N GCLGIG ++ + P RV P E P+D V+CG H ++ I
Sbjct: 408 ALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP-GE-PMD-VACGVDHMVTLARSFI 464
Score = 76 (31.8 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 34/119 (28%), Positives = 50/119 (42%)
Query: 287 GELYTWGSNENGCLG-IGSIDVLHSPERVQGPFSE-SPVDQVSCGWKHTAAIS-EGKILT 343
G L+ WG++E L + ++ P + PFS V Q +CG A ++ EG +
Sbjct: 302 GGLFGWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGQVKQAACGGTGCAVLNGEGHVFV 359
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS---CGFNHTGAL 399
WG+G G L + I PT+ E +QVS CG +H AL
Sbjct: 360 WGYGIL---------GKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAAL 409
Score = 72 (30.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L GE+Y+ G +G G+G ++ +P ++ G + V QV+ A+S +G +
Sbjct: 245 LTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNVVQVATYGDCCLAVSADGGL 304
Query: 342 LTWGWGGS 349
+GWG S
Sbjct: 305 --FGWGNS 310
Score = 66 (28.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 282 SLISG-GELYTWGSNENGCLGIGSIDVLHS--PERVQGPF---SE-SPVDQVS---CGWK 331
++++G G ++ WG G LG G ++L + PE + SE +P QVS CG
Sbjct: 349 AVLNGEGHVFVWGY---GILGKGP-NLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLS 404
Query: 332 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQV 389
H AA++ G++ WG + G LG G D P V GE + V
Sbjct: 405 HFAALTNRGELFVWG------------KNIRGCLGIGRLEDQYFPWRVTMPGE---PMDV 449
Query: 390 SCGFNH 395
+CG +H
Sbjct: 450 ACGVDH 455
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 225 (84.3 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20
Identities = 62/190 (32%), Positives = 100/190 (52%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
G + L LT+TG VY++GL +G+ G + L P +I L K + I+ G HHS A
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDV-LIPTQILELSNKRIKSIACGTHHSLA 260
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL----GFEQSVAVT 193
+ G++Y WG ++G+LGLG + ++P PT + ++ + + A G + S+ +
Sbjct: 261 MDDLGQVYSWGNGASGRLGLGNDFS-IVPTPTLISVINRFGSNEIATAIAAGCDNSMILG 319
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V S+G+ +LG+ + LGF + TP+ I + +K IA A + HS +
Sbjct: 320 SNGDVYSFGSNLHYKLGYKECDGALGF-----QSTPKKIPSILQMK-SIACASW-HSVFL 372
Query: 254 DENGRVYIFG 263
D GRVY G
Sbjct: 373 DLKGRVYTCG 382
Score = 178 (67.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 65/249 (26%), Positives = 108/249 (43%)
Query: 43 WGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYATGL 97
WGNG GRLGLG+ S P + S + A+A G +++ L G VY+ G
Sbjct: 270 WGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGS 329
Query: 98 NDFGQLGISE---NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
N +LG E +G+ P +I + ++ I+ HS + + G +Y G ++NG+
Sbjct: 330 NLHYKLGYKECDGALGFQSTPKKIPSIL-QMKSIACASWHSVFLDLKGRVYTCGSSTNGR 388
Query: 155 LGLGKKAAKVIPIPTKVECLS----GIFT-----KQAALGFEQSVAVTGGGKVLSWGAGG 205
LG + P +V + G KQ A G + ++ G + SWG
Sbjct: 389 LGRAISSYSSF-YPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNT 447
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
+LG +++G S+ P+L+ L + A G H + + G V+ +GD
Sbjct: 448 KSQLGL---INLVGISEYYSQ--PKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCYGDN 502
Query: 266 AVDKMLFQE 274
+ + F E
Sbjct: 503 STLQCGFGE 511
Score = 155 (59.6 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 52/153 (33%), Positives = 76/153 (49%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+Q G +++ +T G +Y G S G+ G KK + + IPT++ LS K A G
Sbjct: 197 IQTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKK--RDVLIPTQILELSNKRIKSIACG 254
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV---KVKI 242
S+A+ G+V SWG G SGRLG G + SI+ TP LI + ++
Sbjct: 255 THHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVP--------TPTLISVINRFGSNEIAT 306
Query: 243 A-AAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
A AAG +S + NG VY FG K+ ++E
Sbjct: 307 AIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKE 339
Score = 146 (56.5 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 64/267 (23%), Positives = 117/267 (43%)
Query: 41 ALWGNG--DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A++ +G YG+ G P +K++ACG H+L + + G VY+ G
Sbjct: 214 AVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGNG 273
Query: 99 DFGQLGISENIGYSLEPLRISGLKK----EVVQ-ISTGYHHSSAITVDGELYMWGKNSNG 153
G+LG+ + P IS + + E+ I+ G +S + +G++Y +G N +
Sbjct: 274 ASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHY 333
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+LG K+ + + + + I K A SV + G+V + G+ +GRLG
Sbjct: 334 KLGY-KECDGALGFQSTPKKIPSILQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRA 392
Query: 213 QESSILGF----LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
SS F + T+ T + + E +K +IA G + + E+G +Y +G
Sbjct: 393 I-SSYSSFYPERVSITNSKTNGTLPQEEVIK-QIAC-GTNFTTVLSESGSLYSWGVNTKS 449
Query: 269 KM----LFQEGNHARRPSLISGGELYT 291
++ L + +P L++ YT
Sbjct: 450 QLGLINLVGISEYYSQPKLVTALNPYT 476
Score = 140 (54.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 43/145 (29%), Positives = 70/145 (48%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG---YSLEPLRISGLKKEV 125
++ +K +ACG T L+E+G +Y+ G+N QLG+ +G Y +P ++ L
Sbjct: 417 QEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYT 476
Query: 126 VQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ + G H A++ GE++ +G NS Q G G+ I + TKV+ I T +
Sbjct: 477 IHSFAVGDQHVVALSDQGEVFCYGDNSTLQCGFGEVLNFEINL-TKVK----IETTSS-- 529
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRL 209
+ GGG V AGGS +
Sbjct: 530 ----DAPIIGGGGVFKVSAGGSNTM 550
Score = 87 (35.7 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20
Identities = 26/70 (37%), Positives = 35/70 (50%)
Query: 287 GELYTWGSNENGCLG--IGSIDVLHSPERVQ-------GPF-SESPVDQVSCGWKHTAAI 336
G +YT GS+ NG LG I S + PERV G E + Q++CG T +
Sbjct: 376 GRVYTCGSSTNGRLGRAISSYSSFY-PERVSITNSKTNGTLPQEEVIKQIACGTNFTTVL 434
Query: 337 SE-GKILTWG 345
SE G + +WG
Sbjct: 435 SESGSLYSWG 444
Score = 65 (27.9 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 283 LISGGELYTWGSNENGCLGIGS---IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
L G LY+WG N LG+ + I +S ++ + + + G +H A+S+
Sbjct: 434 LSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQ 493
Query: 339 GKILTWG 345
G++ +G
Sbjct: 494 GEVFCYG 500
Score = 56 (24.8 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 285 SGGELYTWGSNENGCLGI----GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 339
S G++Y++GSN + LG G++ +P+++ P S + ++C H+ + +G
Sbjct: 320 SNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKI--P-SILQMKSIACASWHSVFLDLKG 376
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP-TIVNFGENVKALQVSCGFNHTGA 398
++ T G ++G SS + V + T + Q++CG N T
Sbjct: 377 RVYTCG-SSTNGRLGR-AISSYSSF-YPERVSITNSKTNGTLPQEEVIKQIACGTNFTTV 433
Query: 399 LLE 401
L E
Sbjct: 434 LSE 436
Score = 39 (18.8 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIGSI---DVLHSPERVQGPFSESPV 323
+L GE++ +G N G G + ++ + +++ S++P+
Sbjct: 489 ALSDQGEVFCYGDNSTLQCGFGEVLNFEINLTKVKIETTSSDAPI 533
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 263 (97.6 bits), Expect = 8.7e-20, P = 8.7e-20
Identities = 98/364 (26%), Positives = 154/364 (42%)
Query: 46 GDYGRLGL---GSLESRWRPVVCS---AFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
G+YG + L G + + CS E + +ACG H++ LT G ++ G N
Sbjct: 87 GEYGAVLLDDGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENA 146
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+ + + P + L V QIS G +HS +++ G ++ WG NS GQLGLG
Sbjct: 147 LGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLG 206
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P T V L + G E + A+ GG V ++G+GG G+LGH
Sbjct: 207 DTTDRFVP--TVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNS----- 259
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGNH 277
F E+ PRL+ EL G KV G H+ + + +Y FG ++ E
Sbjct: 260 -F---KDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVK 315
Query: 278 ARRPSLISG----GELYTW-----GSNENGCLGIGSIDVLHSPERVQG--PFSESPVDQV 326
P + + YT G N + L + +P+ +G F ++Q
Sbjct: 316 QSVPLPVDQPTEYNDEYTIQKLVAGENHSFALYFKELGNEANPDPTRGIMTFDNGMIEQC 375
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSE---DGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
CG AI + K + +G+F + DGH + G D + +I N
Sbjct: 376 ECGKDPRKAIKDLKKVFSSAASLNGSFLKTRHDGHYQTSEEYCGLDFGLVESSIATLSRN 435
Query: 384 VKAL 387
+ +
Sbjct: 436 ERLI 439
Score = 233 (87.1 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 68/227 (29%), Positives = 113/227 (49%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQ 127
+K++++ + CG E G V L+D G++ I + S E + GL+ ++V+Q
Sbjct: 77 KKNTIRLIVCG--------EYGAVL---LDDGGKVLIMDK---STECSPLKGLENRQVIQ 122
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
I+ G HS A+T DG+L++WG+N+ GQLGL K+ A P ++ L GI Q + G
Sbjct: 123 IACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGT-QSPRHLQSLCGIPVAQISAGGN 181
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S ++ G V WG +G+LG G +T + P ++ L+ K+ + G
Sbjct: 182 HSFVLSLSGVVFGWGGNSAGQLGLGD---------TTDRFVPTVVNSLKRKKIVSISCGG 232
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGS 294
H+A + + G V+ FG ++ P L++ EL WGS
Sbjct: 233 EHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVA--EL--WGS 275
Score = 187 (70.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 41/128 (32%), Positives = 68/128 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG R+ P V ++ ++ + +++CGG HT L + G V+ G FGQ
Sbjct: 195 WGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQ 254
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG + P ++ L +V Q++ G +H+ T +L Y +G GQLG G++
Sbjct: 255 LG-HNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQ 313
Query: 161 AAKVIPIP 168
+ +P+P
Sbjct: 314 VKQSVPLP 321
Score = 177 (67.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 53/180 (29%), Positives = 87/180 (48%)
Query: 42 LWGNGDYGRLGL-----GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
+WG G+LGL G+ R +C + ++ GG H+ L+ +G V+ G
Sbjct: 141 VWGENALGQLGLRKEQAGTQSPRHLQSLCGI----PVAQISAGGNHSFVLSLSGVVFGWG 196
Query: 97 LNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N GQLG+ + + P ++ LK K++V IS G H++A+ G ++ +G GQL
Sbjct: 197 GNSAGQLGLGDTTDRFV-PTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQL 255
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQE 214
G + K P V L G Q G ++ T K++ S+G G G+LG+G++
Sbjct: 256 G--HNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQ 313
Score = 168 (64.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 60/214 (28%), Positives = 97/214 (45%)
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK--VKIAAAGFLHSACIDEN 256
+S G G + G+ S +L S+ +L K L+ K +++ G + +D+
Sbjct: 40 MSAGKSFVGFIREGKVS-VLRLRGKDSDQDGKL-KHLQLKKNTIRLIVCGEYGAVLLDDG 97
Query: 257 GRVYIFGDRAVD---------KMLFQEG-NHARRPSLISGGELYTWGSNENGCLGIGSID 306
G+V I D++ + + + Q +L + G+L+ WG N G LG+
Sbjct: 98 GKVLIM-DKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQ 156
Query: 307 V-LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
SP +Q PV Q+S G H+ +S ++ +GWGG+ S GQLG
Sbjct: 157 AGTQSPRHLQS-LCGIPVAQISAGGNHSFVLSLSGVV-FGWGGN----------SAGQLG 204
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+ D PT+VN + K + +SCG HT AL
Sbjct: 205 LGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAAL 238
Score = 158 (60.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 68/224 (30%), Positives = 104/224 (46%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+++ G G+ L G + I+ +ST E +P +K LE +V A G HS + +
Sbjct: 82 RLIVCGEYGAVLLDDGGKVLIMD--KST-ECSP--LKGLENRQVIQIACGDQHSMALTND 136
Query: 257 GRVYIFGDRAVDKMLF---QEGNHARR--PSL-------IS-GGE----------LYTWG 293
G+++++G+ A+ ++ Q G + R SL IS GG ++ WG
Sbjct: 137 GQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWG 196
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGT 352
N G LG+G P V + +SCG +HTAA+++G + T+G GG
Sbjct: 197 GNSAGQLGLGDTTDRFVPTVVNS-LKRKKIVSISCGGEHTAALAKGGTVFTFGSGG---- 251
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
F GQLGH + D HP +V K QV+CG NHT
Sbjct: 252 F--------GQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHT 287
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 234 (87.4 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 64/222 (28%), Positives = 112/222 (50%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-------- 123
+++ ++CG AH + L+E G + A G N+ GQLG P I+ K
Sbjct: 167 AIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPEL 226
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQ 181
+++Q+S G +H++A++ GE+Y WG S GQLG + ++ IP +V L G+ K+
Sbjct: 227 VKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKE 286
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKV 240
A G + A++ G + +WG G +G+LG G +S + + SE R + L V
Sbjct: 287 VACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDV 346
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
++ A G H+ GR+ +G + + ++ ++A PS
Sbjct: 347 RLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPS 388
Score = 181 (68.8 bits), Expect = 9.5e-20, Sum P(2) = 9.5e-20
Identities = 64/240 (26%), Positives = 103/240 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWR------PVV--CSAFEKHSLKALACGGAHTLFLTETGCVY 93
+WG G+ G E R P + C A ++CG HT + G ++
Sbjct: 24 VWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASDGSLF 83
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITV----DG-----E 143
A G N++GQLG +G P ++ L+ E V+ +S G ++AI DG
Sbjct: 84 AWGANEYGQLGDGTEVGRK-HPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTSR 142
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L++WG+N L + + P T + +Q + G VA++ G + +WG
Sbjct: 143 LWVWGQNQGSNLP--RLFSGAFPATTAI--------RQVSCGTAHVVALSEEGLLQAWGY 192
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G L R + Y L + E VK+ + G H+A + + G VY +G
Sbjct: 193 NEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWG 252
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 58/208 (27%), Positives = 89/208 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVV---CSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G G+LG SL+S + ++ + S+K +ACGG HT L+ G +YA G
Sbjct: 251 WGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWGGGQ 310
Query: 100 FGQLGISENIGYS----------LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
GQLG+ G+ L + + + +V ++ G+ H+ +G + WG
Sbjct: 311 AGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRICGWGY 370
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG--KVLSWGAGGSG 207
NS GQ K + P P V+ G K AA G +V ++ + S
Sbjct: 371 NSYGQAANEKSSYAWYPSP--VDWCVGQVRKLAAGGGHSAVLTDAFSLKELCEFQLADSV 428
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKEL 235
L + E + F R SE RL + L
Sbjct: 429 NLSNASEIQDVAF-RMGSEALARLCERL 455
Score = 134 (52.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 48/127 (37%), Positives = 65/127 (51%)
Query: 282 SLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQG--PF-SESP----VDQVSCGWKHT 333
+L G L WG NE G LG G + + L +P + F E+P + Q+SCG HT
Sbjct: 180 ALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHT 239
Query: 334 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
AA+S+ G++ TWG G S G GH S L G D + I +V + V +V+CG
Sbjct: 240 AALSDAGEVYTWGLG-SMGQL---GHVS---LQSG-DKELIPRRVVGL-DGVSMKEVACG 290
Query: 393 FNHTGAL 399
HT AL
Sbjct: 291 GVHTCAL 297
Score = 125 (49.1 bits), Expect = 9.5e-20, Sum P(2) = 9.5e-20
Identities = 41/121 (33%), Positives = 61/121 (50%)
Query: 282 SLISGGELYTWGSNENGCLGIGSI---DVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 337
+L GE+YTWG G LG S+ D P RV G S + +V+CG HT A+S
Sbjct: 241 ALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVS-MKEVACGGVHTCALSL 299
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGG--QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
EG + WG GG G G SG + +G+++ + ++ +V+ V+CG +H
Sbjct: 300 EGALYAWG-GGQAGQLGL-GPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRL--VACGHSH 355
Query: 396 T 396
T
Sbjct: 356 T 356
Score = 118 (46.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 35/113 (30%), Positives = 50/113 (44%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISEN-----IGYSLEPLRI---SGLKKEVVQISTGY 132
A ++ + +Y G N GQ G +E I L P +G + IS G
Sbjct: 11 APSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGR 70
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
H++A+ DG L+ WG N GQLG G + + P KV+ L F K + G
Sbjct: 71 EHTAAVASDGSLFAWGANEYGQLGDGTEVGR--KHPKKVKQLQSEFVKFVSCG 121
Score = 108 (43.1 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 42/126 (33%), Positives = 59/126 (46%)
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQVSCGWKHTAAISEGKIL 342
+S L+ WG N+ GS + P G F + + + QVSCG H A+SE +L
Sbjct: 138 LSTSRLWVWGQNQ------GS----NLPRLFSGAFPATTAIRQVSCGTAHVVALSEEGLL 187
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVN----F----GENVKALQVSCGF 393
WG ++E G QLG G + + P ++N F E VK +Q+SCG
Sbjct: 188 Q-AWG-----YNEQG-----QLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGE 236
Query: 394 NHTGAL 399
HT AL
Sbjct: 237 YHTAAL 242
Score = 102 (41.0 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 41/120 (34%), Positives = 56/120 (46%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
++ S G L+ WG+NE G LG G+ P++V+ SE V VSCG TAAI+E +
Sbjct: 75 AVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEF-VKFVSCGAFCTAAIAEPR- 132
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GT S GQ G+++ + F QVSCG H AL E
Sbjct: 133 ------ENDGTLSTSRLWVWGQ-NQGSNLPRLFSGA--FPATTAIRQVSCGTAHVVALSE 183
Score = 87 (35.7 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 27/83 (32%), Positives = 38/83 (45%)
Query: 287 GELYTWGSNENGCLGIGS-----IDVLHSPERV--QGPFSESPVDQ--VSCGWKHTAA-I 336
G LY WG + G LG+G V + E + P P D V+CG HT +
Sbjct: 301 GALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYM 360
Query: 337 SEGKILTWGWGGSHGTFSEDGHS 359
EG+I WG+ S+G + + S
Sbjct: 361 REGRICGWGYN-SYGQAANEKSS 382
Score = 57 (25.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 17/77 (22%), Positives = 33/77 (42%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--AAG 246
SV++ + WG SG+ G ++ +L R + P L G + + G
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLL---RIPKQLPPELFGCPAGANSRWLDISCG 69
Query: 247 FLHSACIDENGRVYIFG 263
H+A + +G ++ +G
Sbjct: 70 REHTAAVASDGSLFAWG 86
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 238 (88.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 74/231 (32%), Positives = 123/231 (53%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFG 263
R E P+ + + G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFG 265
Score = 178 (67.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDVPVVKVAS-GNDHLVMLTADGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 39/118 (33%), Positives = 62/118 (52%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LT+ G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 48 (22.0 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 283 LISGGELYTWGSNENGCLG 301
L + G+LYT G E G LG
Sbjct: 187 LTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 238 (88.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 74/231 (32%), Positives = 123/231 (53%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFG 263
R E P+ + + G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFG 265
Score = 178 (67.7 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDVPVVKVAS-GNDHLVMLTADGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 39/118 (33%), Positives = 62/118 (52%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LT+ G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 48 (22.0 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 283 LISGGELYTWGSNENGCLG 301
L + G+LYT G E G LG
Sbjct: 187 LTADGDLYTLGCGEQGQLG 205
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 262 (97.3 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 109/339 (32%), Positives = 166/339 (48%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYM 146
+TG V+ FG+ +ENI P + K ++ + +S G H++ +T + +LYM
Sbjct: 10 DTGAVFT-----FGKTKFAENI-----PSKF-WFKNDIPICLSCGDEHTAIVTGNNKLYM 58
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+G N+ GQLGLG KAA +I PT ++ L K AA G ++ T G V + G
Sbjct: 59 FGSNNWGQLGLGSKAA-IIK-PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNE 116
Query: 207 GRLGHGQESSILGFLRSTSEYTPR-LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G F + +TP IK+L +AG SA + E+G+++++GD
Sbjct: 117 GQLGLGDTDDRDTFHQIVF-FTPADTIKQL--------SAGANTSAALTEDGKLFMWGDN 167
Query: 266 AVDKM-LFQEGN----H---ARRP-SLIS-G----------GELYTWGSNENGCLGI-GS 304
+ ++ L + N H +P S IS G GELYT+G ENG LG+
Sbjct: 168 SEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE 227
Query: 305 IDVLH-SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ + H SP+RV G E + QV+CG HT ++E + +G G F GQ
Sbjct: 228 LLMNHRSPQRVLG-IPERVI-QVACGGGHTVVLTEKVVYAFGLG----QF--------GQ 273
Query: 364 LGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
LG G + + P I+ ++ K +SCG NHT + E
Sbjct: 274 LGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312
Score = 261 (96.9 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 103/360 (28%), Positives = 165/360 (45%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP V G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS R++ E V +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRSPQ----RVLGIPERV-IQVACGGG- 253
Query: 249 HSACIDENGRVYIFG-----DRAVDKMLFQ-------EGNHARRPSLISGGE-------- 288
H+ + E VY FG + LF+ E ++ IS GE
Sbjct: 254 HTVVLTEKV-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312
Query: 289 ---LYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILT 343
LYT+G +G LG+G + + P F V ++CG H + ++ T
Sbjct: 313 LGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSN-FLRFAVQLIACGGCHMLVFATPRLGT 371
Score = 216 (81.1 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 88/338 (26%), Positives = 144/338 (42%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ ++P I LK E V+++ G +H
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + I T + + KQ + G S
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G +S++ T I + G L++
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYT 213
Query: 251 ACIDENGRV-----YIFGDRAVDKML------FQEGNHARRPSLISGGELYTWGSNENGC 299
ENG++ + R+ ++L Q +++ +Y +G + G
Sbjct: 214 FGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGLGQFGQ 273
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+G+ S ++ + + +SCG HTA ++E G + T+G G HG
Sbjct: 274 LGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---- 328
Query: 359 SSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNH 395
LG N + PT+ NF L ++CG H
Sbjct: 329 -----LGMENFTNQFFPTLCSNFLRFAVQL-IACGGCH 360
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 67/245 (27%), Positives = 105/245 (42%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAVDKML--FQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 94 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 210
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG N++ H P V G + +QV+CG HT
Sbjct: 211 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 257
Query: 399 LLEYV 403
L E V
Sbjct: 258 LTEKV 262
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 263 (97.6 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 104/349 (29%), Positives = 156/349 (44%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
++ +LK DI + G + R F ++G+ + G+LGL +PV +
Sbjct: 27 SRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVKVLK 84
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
+++ACG HTL T G + A G N GQLG+ N S + LR + +
Sbjct: 85 GERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLL 144
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G H S+A+T DG L++WG NS GQLG G + ++P E G + G+
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----KELNMGQSIHWVSCGYRH 200
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G V S+G GRLG L + S Y P+ ++ L V +++A G
Sbjct: 201 SALVTDSGDVYSFGESADGRLGLSAHQ-----LANHS-Y-PQRVESLHSV-LQVACGG-K 251
Query: 249 HSACIDENGRVYIFG----------------DRAVDKMLFQEGN--HA----RRPSLIS- 285
H+ + E+ +Y FG D V F++G H + +LI+
Sbjct: 252 HTLALTED-ELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITD 310
Query: 286 GGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPVDQVSCGWKH 332
G LYT+G +G LG G + + +P Q F E V V+CG H
Sbjct: 311 SGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQR-FFEYSVMTVACGSSH 358
Score = 248 (92.4 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 95/332 (28%), Positives = 156/332 (46%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ I+ N+ P R+ LK ++ V IS G HS+ +T G L
Sbjct: 7 IPDTGAVFT-----FGKSKIANNV-----PSRL-WLKSDIPVHISCGQSHSAFVTEQGRL 55
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+++G N+ GQLGL K P+ KV L G + A G + ++ T G++L+ G
Sbjct: 56 FVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGN 113
Query: 205 GSGRLGHGQESSILGF--LRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G+LG G + + F LR +Y P +L+ + + G L + G++
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGF 173
Query: 262 FGDR--AVDKML-FQEGNH-----ARRPSLIS-GGELYTWGSNENGCLGIGSIDVL-HS- 310
D + K L + H R +L++ G++Y++G + +G LG+ + + HS
Sbjct: 174 GNDSHALLPKELNMGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSY 233
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
P+RV+ S V QV+CG KHT A++E ++ +G GG G QLG G V
Sbjct: 234 PQRVESLHS---VLQVACGGKHTLALTEDELYCFG-GGEFG-----------QLGLGTLV 278
Query: 371 DYIH-PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + V+CG H+ + +
Sbjct: 279 FVADSPVAVGHFRKGRVTHVTCGEQHSALITD 310
Score = 127 (49.8 bits), Expect = 0.00027, P = 0.00027
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 288 ELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
ELY +G E G LG+G+ + V SP V G F + V V+CG +H+A I++ +L
Sbjct: 260 ELYCFGGGEFGQLGLGTLVFVADSPVAV-GHFRKGRVTHVTCGEQHSALITDSGLLY--- 315
Query: 347 GGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSCGFNH 395
TF + H G+LGHG++ + PT+ + V+CG +H
Sbjct: 316 -----TFGDGRH---GKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 238 (88.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 74/231 (32%), Positives = 123/231 (53%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 58 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 115
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 116 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 174
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E
Sbjct: 175 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANR 231
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFG 263
R E P+ + + G V+ + A G + I G VY FG
Sbjct: 232 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFG 282
Score = 185 (70.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 55/189 (29%), Positives = 88/189 (46%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A +C +H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H
Sbjct: 37 ARSCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMH 95
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ ++ G++Y +G N G LG +P KVE + Q + G + A+T
Sbjct: 96 TVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTD 153
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V WG S R +G ++G L + + +L+ VK+A+ G H +
Sbjct: 154 DGRVFLWG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDVPVVKVAS-GNDHLVMLT 205
Query: 255 ENGRVYIFG 263
+G +Y G
Sbjct: 206 ADGDLYTLG 214
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 71/263 (26%), Positives = 115/263 (43%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LT+ G V+ G +
Sbjct: 108 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFLWGSFRD 165
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 166 NNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRV 224
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + + +P V S G + + A G + A++ G V +G
Sbjct: 225 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLS 284
Query: 205 GSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LG G ES F+ K G + G H+ C+D G+ Y G
Sbjct: 285 NYHQLGTPGTESC---FIPQNLTSFKNSTKSWVGF-----SGGQHHTVCMDSEGKAYSLG 336
Query: 264 DRAVDKMLFQEGNHARR-PSLIS 285
++ EG + P+LIS
Sbjct: 337 RAEYGRLGLGEGAEEKSIPTLIS 359
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 32/103 (31%), Positives = 50/103 (48%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + P ++ K K V S G HH
Sbjct: 264 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFI-PQNLTSFKNSTKSWVGFSGGQHH 322
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+ + +G+ Y G+ G+LGLG+ A + IPT + L +
Sbjct: 323 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEK-SIPTLISRLPAV 364
Score = 48 (22.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 283 LISGGELYTWGSNENGCLG 301
L + G+LYT G E G LG
Sbjct: 204 LTADGDLYTLGCGEQGQLG 222
Score = 47 (21.6 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER-VQGPFSESP-VDQVSCG 329
F G H + S G+ Y+ G E G LG+G + E+ + S P V V+CG
Sbjct: 316 FSGGQH-HTVCMDSEGKAYSLGRAEYGRLGLGE----GAEEKSIPTLISRLPAVSSVACG 370
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 45/151 (29%), Positives = 73/151 (48%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
V C +K +ACGG H+ +T+TG + G +GQ G + L P +S L
Sbjct: 303 VQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCG-QGSTDDELSPTCVSSLL 361
Query: 123 K-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ +++ G H++ + DG++Y +G N GQLG G A+ +P + L + K
Sbjct: 362 GIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKT 421
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ G + +T G+V WG G+LG G
Sbjct: 422 ISCGARHTAVITDEGRVFCWGWNKYGQLGIG 452
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 49/147 (33%), Positives = 71/147 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G YG+ G GS + P S+ ++ +A G HT + G VYA G N FGQ
Sbjct: 335 FGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQ 394
Query: 103 LGISENIGYSLEPL-RISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + +L L L+ V IS G H++ IT +G ++ WG N GQLG+G
Sbjct: 395 LGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDV 454
Query: 161 AAKVIPIPTKV-ECLSGIFTKQAALGF 186
+ P ++ +C F K A G+
Sbjct: 455 IDRNAPAEVRIKDC----FPKNIACGW 477
Score = 169 (64.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 65/216 (30%), Positives = 95/216 (43%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-------------SGL 121
++A GG HTL L++ G V+ G GQLG+ + P I SG+
Sbjct: 238 SVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGV 297
Query: 122 K-KEVVQ-----------ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
VVQ I+ G HS+ IT G L +G GQ G G ++ P T
Sbjct: 298 NMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSP--T 355
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
V L GI ++ A G + + G V ++G G+LG G + + E P
Sbjct: 356 CVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQA---------ETLP 406
Query: 230 RLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+L++ LE V VK + G H+A I + GRV+ +G
Sbjct: 407 KLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWG 442
Score = 168 (64.2 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 53/184 (28%), Positives = 86/184 (46%)
Query: 106 SENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
S+NI S P +S G++ +V ++ G H+ A++ G+++ WG GQLGLG +
Sbjct: 216 SDNIDLSALPCLVSLAPGVR--IVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVR 273
Query: 163 KVI---PIP------------------TKVEC--LSGIFTKQAALGFEQSVAVTGGGKVL 199
V PIP + V+C + G + K+ A G S +T G +L
Sbjct: 274 LVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALL 333
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+ G G + E +P + L G++++ AAG H+ C +G V
Sbjct: 334 TFGWGLYGQCGQGS---------TDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDV 384
Query: 260 YIFG 263
Y FG
Sbjct: 385 YAFG 388
Score = 144 (55.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 94/378 (24%), Positives = 161/378 (42%)
Query: 35 LQRRFAALWG---NGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+ +R +WG R L S +E + P V S+++ + CG A + E+G
Sbjct: 28 VSQRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWK--DVSGGGCGFA--MATAESG 83
Query: 91 CVYATG-LNDFGQLGI-SENIGYSLEPLRISGLKKEV-VQ-ISTGYHHSSAITVDGELYM 146
+ G +D GQ + S G + EP L EV VQ G+ H A+T + ++Y
Sbjct: 84 KLITWGSTDDLGQSYVTSGKHGETPEPFP---LPPEVCVQKAEAGWAHCVAVTENQQVYT 140
Query: 147 WGKNS---NGQL-GL--GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
WG G++ G G + I T+ + S K+++ G V GGG+
Sbjct: 141 WGWRECIPTGRVFGQVDGDSCERNISFSTE-QVSSSSQGKKSSGGTSSQVEGRGGGEPTK 199
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
+ + SS + ++ P L+ GV++ AAG H+ + + G+V+
Sbjct: 200 KRRISPSKQA-AENSSQSDNIDLSA--LPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVW 256
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
+G ++ L P I E ++G + G+ V+ RV G +
Sbjct: 257 GWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSS--GVNMSSVVQCG-RVLGSY- 312
Query: 320 ESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
V +++CG +H+A I++ G +LT+GWG GQ G G+ D + PT V
Sbjct: 313 ---VKKIACGGRHSAVITDTGALLTFGWG------------LYGQCGQGSTDDELSPTCV 357
Query: 379 NFGENVKALQVSCGFNHT 396
+ ++ +V+ G HT
Sbjct: 358 SSLLGIRIEEVAAGLWHT 375
Score = 137 (53.3 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 37/114 (32%), Positives = 58/114 (50%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAIS-EGKIL 342
S G++Y +G N+ G LG G P+ ++ P E+ V +SCG +HTA I+ EG++
Sbjct: 380 SDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVF 439
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
WGW + GQLG G+ +D P V ++ ++CG+ HT
Sbjct: 440 CWGW------------NKYGQLGIGDVIDRNAPAEVRI-KDCFPKNIACGWWHT 480
Score = 89 (36.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 278 ARRPSLISG-GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
AR ++I+ G ++ WG N+ G LGIG + ++P V+ + ++CGW HT +
Sbjct: 426 ARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR--IKDCFPKNIACGWWHTLLL 483
Query: 337 SE 338
+
Sbjct: 484 GQ 485
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 220 (82.5 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 67/236 (28%), Positives = 109/236 (46%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTE---TGCVYATG 96
A+WGN + G+LG G+ S P + F +S A G +HTL + V A G
Sbjct: 53 AVWGNNESGQLGDGTTTSAATPKRLRLGFATYS-SGFATGASHTLAIARFDNVSGVRAWG 111
Query: 97 LNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N GQ+G + S P++I G V Q++ G HS A+ G ++ WG NS GQL
Sbjct: 112 SNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMALA-GGTVWAWGSNSAGQL 170
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAAL-GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L ++ P +VE A + G S+A T + +WG SG+LG+G
Sbjct: 171 ALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGT- 228
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ S + P+ ++ + ++ +AG H+ +D G ++ +G A ++
Sbjct: 229 --------TLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQL 276
Score = 199 (75.1 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 58/185 (31%), Positives = 89/185 (48%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WGN G+LG G+ S P +++ ++ GG+H L L TG ++A G N
Sbjct: 213 AYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNA 272
Query: 100 FGQLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+GQLG S P++++ L V + + G HS A+ + +Y WG N+ G L
Sbjct: 273 YGQLGNGTTTNQST-PVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLS 330
Query: 157 LGKKAAKVIPIPTKVECLSGI-FT---KQAALG-FEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G ++ P +V S + FT + LG F V G G + +WG G G+LG
Sbjct: 331 VGTTGDQLSP--AQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGD 388
Query: 212 GQESS 216
G S+
Sbjct: 389 GTTSN 393
Score = 182 (69.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 78/300 (26%), Positives = 128/300 (42%)
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S Y HS+ L +WG N +GQLG G + P ++ ++ A G
Sbjct: 37 SPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATP--KRLRLGFATYSSGFATGASH 94
Query: 189 SVAVT---GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
++A+ V +WG+ +G++G +++ TS TP I G ++AA
Sbjct: 95 TLAIARFDNVSGVRAWGSNSAGQIGR-DPATV-----PTSS-TPVKIGGFGGAVQQVAAG 147
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--P-------------SLISGG--- 287
G LHS + G V+ +G + ++ + A R P ++++GG
Sbjct: 148 G-LHSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHS 205
Query: 288 ------ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 340
E Y WG+N +G LG G+ H P++VQ P S + ++S G H A+ S G
Sbjct: 206 IAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLP-SSITIRKISAGGSHNLALDSTGA 264
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA-LQVSCGFNHTGAL 399
I W WG + + GQLG+G + P + V + V G +H+ A+
Sbjct: 265 I--WAWGSN----------AYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAV 312
Score = 146 (56.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 74/275 (26%), Positives = 111/275 (40%)
Query: 96 GLNDFGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAIT----VDGELYMWGKN 150
G N+ GQLG + + LR+ G +TG H+ AI V G + WG N
Sbjct: 56 GNNESGQLGDGTTTSAATPKRLRL-GFATYSSGFATGASHTLAIARFDNVSG-VRAWGSN 113
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S GQ+G P K+ G +Q A G S+A+ GG V +WG+ +G+L
Sbjct: 114 SAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAGGLHSMALAGG-TVWAWGSNSAGQLA 171
Query: 211 HGQESSILGFLRSTSEYTPRLIKE---LEGVKVKIA------------AAGFLHSACIDE 255
SS F E I + G IA A+G L +
Sbjct: 172 LNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTSTEAYAWGNNASGQLGNGTTLS 231
Query: 256 NG---RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
N +V + + K + G+H +L S G ++ WGSN G LG G+ +P
Sbjct: 232 NHMPQKVQLPSSITIRK-ISAGGSH--NLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPV 288
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGW 346
++ P + V G H+ A++ + TWG+
Sbjct: 289 QLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGF 323
Score = 73 (30.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG----PFSESPVDQVSC-GWKHTAAI 336
++ S +YTWG N G L +G+ SP +V+ PF++ V++V G T
Sbjct: 311 AVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTD--VERVVLLGSFFTIVK 368
Query: 337 SEGKILTWGWG-GSHGTFSEDGHSS 360
G W WG +G DG +S
Sbjct: 369 KNGSGGMWAWGYNGYGQLG-DGTTS 392
Score = 50 (22.7 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
SGG ++ WG N G LG G+ +P +V P
Sbjct: 372 SGG-MWAWGYNGYGQLGDGTTSNRTAPVQVALP 403
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 220 (82.5 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 67/236 (28%), Positives = 109/236 (46%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTE---TGCVYATG 96
A+WGN + G+LG G+ S P + F +S A G +HTL + V A G
Sbjct: 53 AVWGNNESGQLGDGTTTSAATPKRLRLGFATYS-SGFATGASHTLAIARFDNVSGVRAWG 111
Query: 97 LNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N GQ+G + S P++I G V Q++ G HS A+ G ++ WG NS GQL
Sbjct: 112 SNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMALA-GGTVWAWGSNSAGQL 170
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAAL-GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L ++ P +VE A + G S+A T + +WG SG+LG+G
Sbjct: 171 ALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGT- 228
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ S + P+ ++ + ++ +AG H+ +D G ++ +G A ++
Sbjct: 229 --------TLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQL 276
Score = 199 (75.1 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 58/185 (31%), Positives = 89/185 (48%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WGN G+LG G+ S P +++ ++ GG+H L L TG ++A G N
Sbjct: 213 AYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNA 272
Query: 100 FGQLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+GQLG S P++++ L V + + G HS A+ + +Y WG N+ G L
Sbjct: 273 YGQLGNGTTTNQST-PVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLS 330
Query: 157 LGKKAAKVIPIPTKVECLSGI-FT---KQAALG-FEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G ++ P +V S + FT + LG F V G G + +WG G G+LG
Sbjct: 331 VGTTGDQLSP--AQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGD 388
Query: 212 GQESS 216
G S+
Sbjct: 389 GTTSN 393
Score = 182 (69.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 78/300 (26%), Positives = 128/300 (42%)
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S Y HS+ L +WG N +GQLG G + P ++ ++ A G
Sbjct: 37 SPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATP--KRLRLGFATYSSGFATGASH 94
Query: 189 SVAVT---GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
++A+ V +WG+ +G++G +++ TS TP I G ++AA
Sbjct: 95 TLAIARFDNVSGVRAWGSNSAGQIGR-DPATV-----PTSS-TPVKIGGFGGAVQQVAAG 147
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--P-------------SLISGG--- 287
G LHS + G V+ +G + ++ + A R P ++++GG
Sbjct: 148 G-LHSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHS 205
Query: 288 ------ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 340
E Y WG+N +G LG G+ H P++VQ P S + ++S G H A+ S G
Sbjct: 206 IAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLP-SSITIRKISAGGSHNLALDSTGA 264
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA-LQVSCGFNHTGAL 399
I W WG + + GQLG+G + P + V + V G +H+ A+
Sbjct: 265 I--WAWGSN----------AYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAV 312
Score = 146 (56.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 74/275 (26%), Positives = 111/275 (40%)
Query: 96 GLNDFGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAIT----VDGELYMWGKN 150
G N+ GQLG + + LR+ G +TG H+ AI V G + WG N
Sbjct: 56 GNNESGQLGDGTTTSAATPKRLRL-GFATYSSGFATGASHTLAIARFDNVSG-VRAWGSN 113
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S GQ+G P K+ G +Q A G S+A+ GG V +WG+ +G+L
Sbjct: 114 SAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAGGLHSMALAGG-TVWAWGSNSAGQLA 171
Query: 211 HGQESSILGFLRSTSEYTPRLIKE---LEGVKVKIA------------AAGFLHSACIDE 255
SS F E I + G IA A+G L +
Sbjct: 172 LNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTSTEAYAWGNNASGQLGNGTTLS 231
Query: 256 NG---RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
N +V + + K + G+H +L S G ++ WGSN G LG G+ +P
Sbjct: 232 NHMPQKVQLPSSITIRK-ISAGGSH--NLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPV 288
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGW 346
++ P + V G H+ A++ + TWG+
Sbjct: 289 QLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGF 323
Score = 73 (30.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG----PFSESPVDQVSC-GWKHTAAI 336
++ S +YTWG N G L +G+ SP +V+ PF++ V++V G T
Sbjct: 311 AVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTD--VERVVLLGSFFTIVK 368
Query: 337 SEGKILTWGWG-GSHGTFSEDGHSS 360
G W WG +G DG +S
Sbjct: 369 KNGSGGMWAWGYNGYGQLG-DGTTS 392
Score = 50 (22.7 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
SGG ++ WG N G LG G+ +P +V P
Sbjct: 372 SGG-MWAWGYNGYGQLGDGTTSNRTAPVQVALP 403
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 235 (87.8 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 61/175 (34%), Positives = 104/175 (59%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K + +P +V+ + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE 209
Score = 178 (67.7 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDVPVVKVAS-GNDHLVMLTADGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 125 (49.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/118 (33%), Positives = 62/118 (52%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LT+ G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 48 (22.0 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 283 LISGGELYTWGSNENGCLG 301
L + G+LYT G E G LG
Sbjct: 187 LTADGDLYTLGCGEQGQLG 205
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 188 (71.2 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 64/194 (32%), Positives = 97/194 (50%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKEVVQISTG 131
++CG AH+L LT+ V++ G N GQ G + E+ YS R+ + +VVQ+ G
Sbjct: 176 VSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCG 235
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSV 190
HS +T GE+Y G ++GQ GLG + P+K+ L+G+ Q A + +
Sbjct: 236 QDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSTPSKLGGDLAGVTVVQVATYGDCCL 293
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLH 249
A++ G V WG S L Q +S+ ST PR + GV KVK A G
Sbjct: 294 ALSADGGVFGWG--NSEYL---QLASVTD---STQVNVPRCLP-FSGVGKVKQVACGGTG 344
Query: 250 SACIDENGRVYIFG 263
A ++E G V+++G
Sbjct: 345 CAILNEEGHVFVWG 358
Score = 154 (59.3 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 69/255 (27%), Positives = 109/255 (42%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK-------ALAC 78
C R S L R GN +G+ G +E V + + H ++ + C
Sbjct: 178 CGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDE---VYSESHKVHRMQDFEGQVVQVVC 234
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISG--LKKEVVQISTGYHHS 135
G H+LFLT+ G VY+ G GQ G+ NI + P ++ G VVQ++T
Sbjct: 235 GQDHSLFLTDKGEVYSCGWGADGQTGLGHYNI--TSTPSKLGGDLAGVTVVQVATYGDCC 292
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIF-TKQAALGFEQSVAV 192
A++ DG ++ WG + QL + +V +P CL SG+ KQ A G +
Sbjct: 293 LALSADGGVFGWGNSEYLQLASVTDSTQV-NVP---RCLPFSGVGKVKQVACGGTGCAIL 348
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRST----SEYTPRLIKELEGVKVKIAAAGFL 248
G V WG G G+ + E+++ + T +E+ P VKV G
Sbjct: 349 NEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPE-------VKVSQIRCGLS 401
Query: 249 HSACIDENGRVYIFG 263
H A + G ++++G
Sbjct: 402 HFAALTNKGELFVWG 416
Score = 152 (58.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 42/131 (32%), Positives = 63/131 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K +ACGG L E G V+ G G
Sbjct: 304 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVWGYGILG 363
Query: 102 Q-LGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ +SE + P + GL + +V QI G H +A+T GEL++WGKN G L
Sbjct: 364 KGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGCL 423
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 424 GIGRLEDQYFP 434
Score = 127 (49.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 56/186 (30%), Positives = 81/186 (43%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFG 101
+G R GL R +PV H + + ACG TL ++T V + GLN
Sbjct: 79 SGPGPRAGLRP-RRRIQPVPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDS 137
Query: 102 QLGI-----SENIGYS--LEPLRIS-GLKK----EVVQISTGYHHSSAITVDGELYMWGK 149
QLG + GY LEP + L + +V+Q+S G HS +T ++ G
Sbjct: 138 QLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGN 197
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLS--WGAGG 205
N++GQ G +V KV + + Q G + S+ +T G+V S WGA G
Sbjct: 198 NAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADG 257
Query: 206 SGRLGH 211
LGH
Sbjct: 258 QTGLGH 263
Score = 113 (44.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
+L + GEL+ WG N GCLGIG ++ + P RV P E PVD V+CG H +++ I
Sbjct: 405 ALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP-GE-PVD-VACGVDHMVTLAKSFI 461
Score = 91 (37.1 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 282 SLISGGELYTWGSNENGCLG-IGSIDVLHSPERVQGPFSE-SPVDQVSCGWKHTAAISE- 338
+L + G ++ WG++E L + ++ P + PFS V QV+CG A ++E
Sbjct: 294 ALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGKVKQVACGGTGCAILNEE 351
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI---VNFGENVKALQVSCGFNH 395
G + WG+G G L + I PT+ F VK Q+ CG +H
Sbjct: 352 GHVFVWGYGIL---------GKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSH 402
Query: 396 TGAL 399
AL
Sbjct: 403 FAAL 406
Score = 75 (31.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L GE+Y+ G +G G+G ++ +P ++ G + V QV+ A+S +G +
Sbjct: 242 LTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGV 301
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCG 392
+GWG S QL D ++ P + F K QV+CG
Sbjct: 302 --FGWGNSEYL----------QLASVTDSTQVNVPRCLPFSGVGKVKQVACG 341
Score = 71 (30.1 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 36/119 (30%), Positives = 51/119 (42%)
Query: 287 GELYTWGSNENGCLGIG-SIDVLHSPERVQ----G--PFS-ESPVDQVSCGWKHTAAIS- 337
G ++ WG G LG G ++ PE + G F+ E V Q+ CG H AA++
Sbjct: 352 GHVFVWGY---GILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTN 408
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVSCGFNH 395
+G++ WG + G LG G D P V GE V V+CG +H
Sbjct: 409 KGELFVWG------------KNIRGCLGIGRLEDQYFPWRVTMPGEPV---DVACGVDH 452
Score = 65 (27.9 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 45/188 (23%), Positives = 76/188 (40%)
Query: 115 PLRISGLKKEVVQISTGYHHS--SAITVD-GELYMWGKNSNGQLGLGKKAAK-------V 164
P R+ L ++ + GY + S+ T D +++ G N + QLG + V
Sbjct: 97 PYRLE-LDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 155
Query: 165 I---PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+P ++ Q + G S+ +T V S G G+ G + +
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGR---KVVEDEV 212
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
S S R+ ++ EG V++ G HS + + G VY G A + N P
Sbjct: 213 YSESHKVHRM-QDFEGQVVQVVC-GQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTP 270
Query: 282 SLISGGEL 289
S + GG+L
Sbjct: 271 SKL-GGDL 277
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 234 (87.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 67/198 (33%), Positives = 95/198 (47%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST + FA WG GD GRLGLG+ ES P + + + CG ++ LT G
Sbjct: 467 STERELFA--WGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQA 524
Query: 93 YATGLNDFGQLGISE-NIG------------YSLEPLRISGLKKE-VVQISTGYHHSSAI 138
A G N F +LG+ ++G + PL + L +E ++ + G HS +
Sbjct: 525 LACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLL 584
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
T G+ Y +G N +GQLG A +V P +V+ L GI A G +VA+ G+V
Sbjct: 585 TASGDCYTFGSNQHGQLGTN--ARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEV 642
Query: 199 LSWGAGGSGRLGHGQESS 216
SWG G GRLG E +
Sbjct: 643 FSWGKGARGRLGRKDEDA 660
Score = 175 (66.7 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 67/244 (27%), Positives = 107/244 (43%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 374 GALLPGAIEQP-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLG 432
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
S +P + L E+VQ++ G H A++ + EL+ WG+ G+LGLG + +
Sbjct: 433 HGSLNDIS-QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH 491
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSIL 218
P V G ++ G + S+ +T G+ L+ G+ +LG G+E +
Sbjct: 492 CCP--QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPH 549
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +TP L+ + G HS + +G Y FG ++ G +A
Sbjct: 550 QQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQL----GTNA 605
Query: 279 RRPS 282
RR S
Sbjct: 606 RRVS 609
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 58/228 (25%), Positives = 95/228 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG GSL +P + A + + +ACG +H L L+ ++A G D G+
Sbjct: 423 FGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGR 482
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + L +E ++ G S +TV G+ G N +LGL +
Sbjct: 483 LGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSL 542
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQ----SVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P P + + FT + +Q SV + +L +G G Q +
Sbjct: 543 GEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLG 602
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
R S P ++ L+G+K+ A G + I G V+ +G A
Sbjct: 603 TNARRVSR-APCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGA 649
Score = 129 (50.5 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L + G+ YT+GSN++G LG + V +P RVQG + V+CG T AI +EG++
Sbjct: 584 LTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQG-LQGIKISTVACGDAFTVAIGAEGEV 642
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+WG G+ G +G L +D HP V
Sbjct: 643 FSWG-KGARGRLGRKDEDAG--LPRPVQLDETHPYTV 676
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L G + T+GS NGCLG GS++ + P V+ V QV+CG H A+S E ++
Sbjct: 414 LTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMV-QVACGASHVLALSTEREL 472
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
WG G GG+LG G + P +V +A +V CG +
Sbjct: 473 FAWGRG------------DGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGID 513
Score = 127 (49.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 44/155 (28%), Positives = 69/155 (44%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI--PIPTKV- 171
PLR+ L EVVQ++ G + +T G L +W G G G I P P V
Sbjct: 332 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG-GALLPGAIEQPQPQFVS 390
Query: 172 ---ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
E SG+ K A G + +T G ++++G+G +G LGHG L S+
Sbjct: 391 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS-------LNDISQ-- 441
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P +++ L G ++ A G H + ++ +G
Sbjct: 442 PTIVEALLGYEMVQVACGASHVLALSTERELFAWG 476
Score = 47 (21.6 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 28/120 (23%), Positives = 49/120 (40%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISEG---K 340
G+ GSN LG+ + + P ++V+ + +P+ + ++ G
Sbjct: 522 GQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHS 581
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLG-HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+L G + TF + H GQLG + V P V + +K V+CG T A+
Sbjct: 582 LLLTASGDCY-TFGSNQH---GQLGTNARRVSRA-PCRVQGLQGIKISTVACGDAFTVAI 636
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 206 (77.6 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 67/205 (32%), Positives = 101/205 (49%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLR-ISGLK 122
C EK +A+A G H++ +T G VY G N+ GQLG + ++P+R + G++
Sbjct: 140 CCRREKS--QAVA-GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVR 196
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
++Q + G + I+ DG++Y GK S G+ G + K + P V L IF QA
Sbjct: 197 --IIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQA 254
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR-LIKELEGVKVK 241
A+G + ++ GKV ++ G GRLGH E++ + PR L+ LE V V
Sbjct: 255 AIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAA---------DVEPRPLLGPLENVPVV 305
Query: 242 IAAAGF---LHSACIDENGRVYIFG 263
AAG+ L AC VY G
Sbjct: 306 QIAAGYCYLLALACQPNGMSVYSVG 330
Score = 204 (76.9 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 66/231 (28%), Positives = 115/231 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G + G+LG G E R + + + A G A T+ +++ G VYA G FG+
Sbjct: 167 FGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGE 226
Query: 103 LGISENIGYSLEPLR----ISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+E G +P+ ++ LK VVQ + G + ++ ++ +G++Y + ++G+LG
Sbjct: 227 ---AEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGH 283
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---GGGKVLSWGAGGSGRLGHGQE 214
+AA V P P + L + Q A G+ +A+ G V S G G G+LGHG
Sbjct: 284 QTEAADVEPRPL-LGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSR 342
Query: 215 SSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFG 263
T E PR+I++ + ++ ++ AAG H+A + ++GRV +G
Sbjct: 343 ---------TDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWG 384
Score = 181 (68.8 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 86/302 (28%), Positives = 131/302 (43%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--KKAAKVIPIPTKVECLSGIFT 179
++E Q G HS A+T GE+Y +G N++GQLG G + A++ P V L G+
Sbjct: 142 RREKSQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQP----VRSLQGVRI 197
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
QAA G +++ ++ GKV + G G +G + + + + TP+L+ L+ +
Sbjct: 198 IQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGT-----KPVT--TPQLVTSLKNIF 250
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ-EGNHAR-RPSL----------ISGG 287
V AA G +A + G+VY F ++ Q E RP L I+ G
Sbjct: 251 VVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAG 310
Query: 288 --------------ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ--VSCGWK 331
+Y+ G G LG GS P RV F + V+ G
Sbjct: 311 YCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYP-RVIEQFQILNLQPRVVAAGAW 369
Query: 332 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
H A + + G++ TWGWG G LGHGN+ P +V +VKA+ V+
Sbjct: 370 HAAVVGQDGRVCTWGWGRY------------GCLGHGNEECESVPKVVEGLSHVKAVHVA 417
Query: 391 CG 392
G
Sbjct: 418 TG 419
Score = 162 (62.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 66/237 (27%), Positives = 104/237 (43%)
Query: 43 WGNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT--ETGC-VYATGL 97
WGN GRLG + + RP++ E + +A G + L L G VY+ G
Sbjct: 275 WGND--GRLGHQTEAADVEPRPLL-GPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGC 331
Query: 98 NDFGQLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G+LG E +E +I L+ VV + G H++ + DG + WG G
Sbjct: 332 GLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVV--AAGAWHAAVVGQDGRVCTWGWGRYG 389
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
LG G + + +P VE LS + A G + V+ G V S+G G S LGH
Sbjct: 390 CLGHGNEECE--SVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHP 447
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVK---VKIAAAGFL----HSACIDENGRVYIFG 263
G R + +P ++ L+ V V+I+ + H+ + E+G+++ FG
Sbjct: 448 SFDEQGN-RHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFG 503
Score = 159 (61.0 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 60/226 (26%), Positives = 99/226 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G +YG G + + P + ++ + + A G T L+ G VY + G+
Sbjct: 224 FGEAEYGGQGTKPVTT---PQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR 280
Query: 103 LGISENIGYSLEPLRISG-LKK-EVVQISTGYHHSSAITV--DG-ELYMWGKNSNGQLGL 157
LG + +EP + G L+ VVQI+ GY + A+ +G +Y G G+LG
Sbjct: 281 LG-HQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGH 339
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P + + + + A G + V G+V +WG G G LGHG E
Sbjct: 340 GSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC- 398
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E P++++ L VK A G + + ++G VY FG
Sbjct: 399 --------ESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFG 436
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 51/184 (27%), Positives = 83/184 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDFG 101
G G G+LG GS P V F+ +L + +A G H + + G V G +G
Sbjct: 330 GCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYG 389
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---- 156
LG S+ P + GL + V ++TG + + ++ DG++Y +G + LG
Sbjct: 390 CLGHGNEECESV-PKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPS 448
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-------AVTGGGKVLSWGAGGS 206
G + A V+ PT V L + + + S+ A+T GK+ ++GAG
Sbjct: 449 FDEQGNRHANVLS-PTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQ 507
Query: 207 GRLG 210
G+LG
Sbjct: 508 GQLG 511
Score = 90 (36.7 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
G + TWG GCLG G+ + P+ V+G S V+ G T +S+ G + ++G
Sbjct: 378 GRVCTWGWGRYGCLGHGNEECESVPKVVEG-LSHVKAVHVATGDYTTFVVSDDGDVYSFG 436
Query: 346 WG-----GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV--KALQVSCG----FN 394
G G H +F E G+ H N + PT+V + V + +Q+S +N
Sbjct: 437 CGESASLGHHPSFDEQGNR------HAN---VLSPTVVTSLKQVNERMVQISLTNSIYWN 487
Query: 395 -HTGALLE 401
HT AL E
Sbjct: 488 AHTFALTE 495
Score = 41 (19.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 282 SLISGGELYTWGSNENGCLG 301
+L G+L+ +G+ + G LG
Sbjct: 492 ALTESGKLFAFGAGDQGQLG 511
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 247 (92.0 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 116/409 (28%), Positives = 178/409 (43%)
Query: 17 DIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKA 75
D + KL + IS ++ + G GD G+LGLG + R +P + + E ++A
Sbjct: 16 DSTVAKKLKVSH--ISHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEG-IVQA 72
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
+A GG HT+ L++TG VY G ND G LG SE G P ++ L ++++Q+S G
Sbjct: 73 VA-GGMHTVCLSDTGNVYTFGCNDEGALGRDTSEE-GSETVPAKVD-LGEKIIQVSAGDS 129
Query: 134 HSSAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS+A+T DG +Y+WG +++NG +GL + K +P KV + + G + V
Sbjct: 130 HSAALTEDGGVYVWGSFRDNNGVIGL-LEPMKKCTVPVKVPIDKPVV--KIVSGNDHLVM 186
Query: 192 VTGGGKVLSWGAGGSGRLGHGQE-----SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+T G++ + G G G+LG E G +R E +IK V G
Sbjct: 187 LTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLL-EPQMVIIKPRGKVVFTDVFCG 245
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT--W-----GSNENGC 299
+ + + G VY FG ++ Q N P +S + T W G + C
Sbjct: 246 AYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLC 305
Query: 300 LGI-GSIDVLHSPE--RVQ-GP-FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 354
L G L E R+ G E V G ++ G +++ FS
Sbjct: 306 LNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQVVACGASVSYAVTKQGSVFS 365
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFG--ENVKALQVSCGFNHTGALLE 401
G + QLG G + D P + EN L VS G HT L++
Sbjct: 366 W-GMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLLVK 413
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 182 (69.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 63/194 (32%), Positives = 95/194 (48%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKEVVQISTG 131
++CG AH+L LT+ V++ G N GQ G + E+ YS R+ +VVQ+ G
Sbjct: 176 VSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCG 235
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSV 190
HS +T GE+Y G ++GQ GLG + P+K+ L+G+ Q A + +
Sbjct: 236 QDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSTPSKLGGDLAGVTVVQVATYGDCCL 293
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLH 249
A++ G V WG S L Q +S+ ST PR + GV KVK A G
Sbjct: 294 ALSADGGVFGWG--NSEYL---QLASVTD---STQVNVPRCLP-FSGVGKVKQVACGGTG 344
Query: 250 SACIDENGRVYIFG 263
A ++ G V+++G
Sbjct: 345 CAVLNAEGHVFVWG 358
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 41/131 (31%), Positives = 60/131 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K +ACGG L G V+ G G
Sbjct: 304 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILG 363
Query: 102 ------QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ I E I +L L + +V QI G H +A+T GEL++WGKN G L
Sbjct: 364 KGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCL 423
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 424 GIGRLEDQYFP 434
Score = 130 (50.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 57/186 (30%), Positives = 81/186 (43%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFG 101
+G R GL R +PV H + + ACG TL ++T V + GLN
Sbjct: 79 SGPGPRAGLRP-RRRIQPVPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDS 137
Query: 102 QLGI-----SENIGYS--LEPLRIS-GLKK----EVVQISTGYHHSSAITVDGELYMWGK 149
QLG + GY LEP + L + +V+Q+S G HS +T ++ G
Sbjct: 138 QLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGN 197
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLS--WGAGG 205
NS+GQ G +V KV + + Q G + S+ +T G+V S WGA G
Sbjct: 198 NSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADG 257
Query: 206 SGRLGH 211
LGH
Sbjct: 258 QTGLGH 263
Score = 113 (44.8 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
+L + GEL+ WG N GCLGIG ++ + P RV P E PVD V+CG H +++ I
Sbjct: 405 ALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP-GE-PVD-VACGVDHMVTLAKSFI 461
Score = 86 (35.3 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 34/124 (27%), Positives = 55/124 (44%)
Query: 282 SLISGGELYTWGSNENGCLG-IGSIDVLHSPERVQGPFSE-SPVDQVSCGWKHTAAIS-E 338
+L + G ++ WG++E L + ++ P + PFS V QV+CG A ++ E
Sbjct: 294 ALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGKVKQVACGGTGCAVLNAE 351
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI---VNFGENVKALQVSCGFNH 395
G + WG+G G +L + I PT+ F V+ Q+ CG +H
Sbjct: 352 GHVFVWGYGIL---------GKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSH 402
Query: 396 TGAL 399
AL
Sbjct: 403 FAAL 406
Score = 75 (31.5 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L GE+Y+ G +G G+G ++ +P ++ G + V QV+ A+S +G +
Sbjct: 242 LTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGV 301
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCG 392
+GWG S QL D ++ P + F K QV+CG
Sbjct: 302 --FGWGNSEYL----------QLASVTDSTQVNVPRCLPFSGVGKVKQVACG 341
Score = 68 (29.0 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 37/120 (30%), Positives = 52/120 (43%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHS--PERVQ----G--PFS-ESPVDQVSCGWKHTAAIS 337
G ++ WG G LG G +L + PE + G F+ E V Q+ CG H AA++
Sbjct: 352 GHVFVWGY---GILGKGP-KLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALT 407
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVSCGFNH 395
+G++ WG + G LG G D P V GE V V+CG +H
Sbjct: 408 NKGELFVWG------------KNIRGCLGIGRLEDQYFPWRVTMPGEPV---DVACGVDH 452
Score = 62 (26.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 44/188 (23%), Positives = 76/188 (40%)
Query: 115 PLRISGLKKEVVQISTGYHHS--SAITVD-GELYMWGKNSNGQLGLGKKAAK-------V 164
P R+ L ++ + GY + S+ T D +++ G N + QLG + V
Sbjct: 97 PYRLE-LDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 155
Query: 165 I---PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+P ++ Q + G S+ +T V S G G+ G + +
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGR---KVVEDEV 212
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
S S R+ ++ +G V++ G HS + + G VY G A + N P
Sbjct: 213 YSESHKVHRM-QDFDGQVVQVVC-GQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTP 270
Query: 282 SLISGGEL 289
S + GG+L
Sbjct: 271 SKL-GGDL 277
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 253 (94.1 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 72/221 (32%), Positives = 108/221 (48%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-E 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK--DDPSLIEGLDNQKVEFVAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGYRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
G H+ A + + G+V+ FG D L GN R L+
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGS-GKDGQL---GNGGTRDQLM 338
Score = 243 (90.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 62/191 (32%), Positives = 102/191 (53%)
Query: 111 YSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
YS++ LR + +K+++QI+ G +HS A++ GEL+ WG+N +GQLG+G+K P
Sbjct: 124 YSMKHLRFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-P 182
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
VE L+G+ Q + G S+A++ G + SWG G+LG LG S +
Sbjct: 183 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLG-------LGHTESKDD-- 233
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
P LI+ L+ KV+ A G HSA + ++G ++ FG ++ + RP L++ E
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA--E 291
Query: 289 LYTWGSNENGC 299
L + + C
Sbjct: 292 LVGYRVTQIAC 302
Score = 210 (79.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 49/162 (30%), Positives = 84/162 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG ES+ P + + ++ +ACGG+H+ LT+ G ++ G GQ
Sbjct: 215 WGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 275 LGHNSTQN-ELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSW 201
+++P+P KV S ++ ++ + + GG + +L W
Sbjct: 334 RDQLMPLPVKVSS-SEELKLESHTSEKELIMIAGGNQSILLW 374
Score = 210 (79.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 57/173 (32%), Positives = 90/173 (52%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G S P + L ++ G AH++ L+ +G +Y+ G N+ G
Sbjct: 162 WGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECG 221
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ +P I GL + V+ ++ G HS+ +T DG L+ +G +GQLG
Sbjct: 222 QLGLGHTESKD-DPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNST 280
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 281 QNELRPC--LVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Score = 149 (57.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
A +L G +Y+WG NE G LG+G + P ++G V+ V+CG H+A ++
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSALLT 259
Query: 338 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
+ G + T+G G HG QLGH + + + P +V + Q++CG HT
Sbjct: 260 QDGLLFTFG-AGKHG-----------QLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307
Query: 397 GALLEYV 403
L YV
Sbjct: 308 ---LAYV 311
Score = 143 (55.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 50/188 (26%), Positives = 88/188 (46%)
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF----QE--------G 275
TP+ IK + +K+ G H + +G+ + + + ++ + F QE G
Sbjct: 87 TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCG 146
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
++ +L GGEL+ WG N +G LG+G +P+ V+ + P+ Q+S G H+
Sbjct: 147 DY-HSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH-LAGVPLAQISAGEAHSM 204
Query: 335 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A+S G I +WG + GQLG G+ P+++ +N K V+CG
Sbjct: 205 ALSMSGNIYSWG------------KNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGG 252
Query: 394 NHTGALLE 401
+H+ L +
Sbjct: 253 SHSALLTQ 260
Score = 138 (53.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 61/219 (27%), Positives = 98/219 (44%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G S+A++ GG++ +WG G+LG G++ ST+ TP++++ L GV +
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK------FPSTT--TPQIVEHLAGVPL 193
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG-------------- 286
+AG HS + +G +Y +G ++ PSLI G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 287 --------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-IS 337
G L+T+G+ ++G LG S P V V Q++CG HT A +S
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHTLAYVS 312
Query: 338 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
+ GK+ ++G G +DG QLG+G D + P
Sbjct: 313 DLGKVFSFGSG-------KDG-----QLGNGGTRDQLMP 339
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 211 (79.3 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 70/244 (28%), Positives = 109/244 (44%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LGL E +C+A ++ +ACG T+ L G V + G N FGQL
Sbjct: 55 GHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQL 114
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA-- 161
G+ + G L P +I LK++ V I+ G H+ A T G ++ WG G K+
Sbjct: 115 GVPQISGPCLIPQKIKSLKEKAVGIAAGLRHALAATESGLVFQWG---TGMASRAKRVHQ 171
Query: 162 AKVIPI------PTKVECLSGIFTKQAALG-FEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K +P+ P +++ G+ Q +L + S++ G G + WG+ HGQ
Sbjct: 172 GKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNK-----HGQL 226
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S FL + + K+ +G+ H E G+V+ +G RA D Q
Sbjct: 227 VSKEVFLVEPKKIDTQFFSH---EKIGAVWSGWTHLVAQTETGKVFTWG-RA-D--YGQL 279
Query: 275 GNHA 278
G HA
Sbjct: 280 GRHA 283
Score = 182 (69.1 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 62/236 (26%), Positives = 110/236 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCS--AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G YG+LGLG E P + + + +K++A GG H+ +T G ++ G N G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 102 QLGIS--ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG++ E++ +SG V +++ G+ + + G + G N+ GQLG+ +
Sbjct: 61 QLGLNHTEDVLCFTLCTALSGFC--VQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ 118
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + IP K++ L AA G ++A T G V WG G + R + L
Sbjct: 119 ISGPCL-IPQKIKSLKEKAVGIAA-GLRHALAATESGLVFQWGTGMASRAKRVHQGKTLP 176
Query: 220 FLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ E P IK GV + +++ + +L S G +Y++G +++ +E
Sbjct: 177 VFWAAKE--PCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQLVSKE 230
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 50/180 (27%), Positives = 82/180 (45%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYM 146
G +Y G N GQL +S+ + + +EP +I +++ + +G+ H A T G+++
Sbjct: 213 GHLYVWGSNKHGQL-VSKEV-FLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFT 270
Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKVECL-------SG---IFTKQAALGFEQSVAVT 193
WG+ GQLG A +VI + + + C +G I Q A G E ++AV
Sbjct: 271 WGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHNLAVV 330
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G LSWG G G G E+++ + P+ +K L K + G HS +
Sbjct: 331 GDC-CLSWGWNEHGMCGDGTEANV---------HVPKPVKALGYAKQILIGCGAGHSLAL 380
Score = 73 (30.8 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 21/77 (27%), Positives = 32/77 (41%)
Query: 325 QVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
Q++CG +H A+ L+WGW HG G G + + P V
Sbjct: 318 QIACGSEHNLAVVGDCCLSWGWN-EHG-----------MCGDGTEANVHVPKPVKALGYA 365
Query: 385 KALQVSCGFNHTGALLE 401
K + + CG H+ AL +
Sbjct: 366 KQILIGCGAGHSLALCQ 382
Score = 66 (28.3 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
+LFQ + + G +WG NE+G G G+ +H P+ V+ + + CG
Sbjct: 315 LLFQIACGSEHNLAVVGDCCLSWGWNEHGMCGDGTEANVHVPKPVKALGYAKQI-LIGCG 373
Query: 330 WKHTAAISE 338
H+ A+ +
Sbjct: 374 AGHSLALCQ 382
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 245 (91.3 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 60/178 (33%), Positives = 97/178 (54%)
Query: 111 YSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
YS+E R + +K ++QI+ G +HS A++ GEL+ WG+N +GQLG+G+ A P
Sbjct: 134 YSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFAST-STP 192
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
VE LSG+ Q + G S+A++ G V SWG G+LG G + ++ +
Sbjct: 193 EIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGH---------TYNKES 243
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P I+ L+ KV+ A G H+A + ++G V+ FGD ++ + RP L++G
Sbjct: 244 PSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTG 301
Score = 243 (90.6 bits), Expect = 6.8e-18, Sum P(3) = 6.8e-18
Identities = 72/222 (32%), Positives = 109/222 (49%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK- 123
C EK+ ++ + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 143 CILQEKNIIQ-ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGV 201
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+VQIS G HS A+++ G +Y WG+N GQLGLG K P+ +E L + A
Sbjct: 202 PLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNK--ESPSCIEALDDQKVEFLA 259
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + +T G V ++G G G+LGH + +E PRL+ L G +V
Sbjct: 260 CGGCHTALLTKSGLVFTFGDGKYGQLGHNS---------TQNELRPRLVTGLVGNRVTQI 310
Query: 244 AAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
A G H+ A + + G+V+ FG ++ GN R LI
Sbjct: 311 ACGRQHTLAYVSDTGKVFSFGSGKEGQL----GNGGTRNQLI 348
Score = 228 (85.3 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG ++ P A + ++ LACGG HT LT++G V+ G +GQ
Sbjct: 225 WGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQ 284
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++GL V QI+ G H+ A D G+++ +G GQLG G
Sbjct: 285 LGHNSTQN-ELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGT 343
Query: 161 AAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGK-VLSW 201
++IP P K+ LS K +++ ++ + V GG + +L W
Sbjct: 344 RNQLIPRPMKL--LSSEELKSESSTSVKELIMVAGGNQSILIW 384
Score = 193 (73.0 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 57/174 (32%), Positives = 90/174 (51%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG+G + S P + L ++ G AH++ L+ +G VY+ G ND G
Sbjct: 172 WGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCG 231
Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ Y+ E P I L + V+ ++ G H++ +T G ++ +G GQLG
Sbjct: 232 QLGLGHT--YNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNS 289
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L G Q A G + ++A V+ GKV S+G+G G+LG+G
Sbjct: 290 TQNELRP--RLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNG 341
Score = 138 (53.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 51/183 (27%), Positives = 84/183 (45%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---DRAVDKMLFQEGNHARRP---- 281
P+ IK + +K+ G H + +G+ + + + A + + QE N +
Sbjct: 99 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEHARFQCILQEKNIIQITCGDY 158
Query: 282 ---SLISGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAIS 337
+L GGEL+ WG N +G LG+G I S PE V+ S P+ Q+S G H+ A+S
Sbjct: 159 HSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN-LSGVPLVQISAGEAHSMALS 217
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
G + +WG + GQLG G+ + P+ + ++ K ++CG HT
Sbjct: 218 MSGNVYSWG------------RNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHT 265
Query: 397 GAL 399
L
Sbjct: 266 ALL 268
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 62/219 (28%), Positives = 95/219 (43%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G S+A++ GG++ +WG G+LG G+ STS TP +++ L GV +
Sbjct: 152 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGR------IFASTS--TPEIVENLSGVPL 203
Query: 241 KIAAAGFLHSACIDENGRVYIFG--D------------------RAVD--KMLFQEGNHA 278
+AG HS + +G VY +G D A+D K+ F
Sbjct: 204 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 263
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-IS 337
L G ++T+G + G LG S P V G V Q++CG +HT A +S
Sbjct: 264 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNR-VTQIACGRQHTLAYVS 322
Query: 338 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
+ GK+ ++G G GQLG+G + + P
Sbjct: 323 DTGKVFSFGSGKE------------GQLGNGGTRNQLIP 349
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
A +L G +Y+WG N+ G LG+G SP ++ + V+ ++CG HTA ++
Sbjct: 211 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGGCHTALLT 269
Query: 338 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
+ G + T+G DG GQLGH + + + P +V + Q++CG HT
Sbjct: 270 KSGLVFTFG----------DGKY--GQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHT 317
Query: 397 GALLEYV 403
L YV
Sbjct: 318 ---LAYV 321
Score = 46 (21.3 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK--ILTW 344
G+++++GS + G LG G P ++ SE + S K ++ G IL W
Sbjct: 325 GKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSESSTSVKELIMVAGGNQSILIW 384
Score = 39 (18.8 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
TF ++ H HG D HPTIV F
Sbjct: 854 TFEKNAHYE-----HGYDSS--HPTIVMF 875
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 216 (81.1 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 69/223 (30%), Positives = 104/223 (46%)
Query: 46 GDYGRLGLGSLE-SR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
GD G L+ SR +RP + A + K +A G T+FL+ G Y G N GQ
Sbjct: 188 GDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQ 247
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P + LK VVQI+ G + A+T DG +Y +G SN LG G++
Sbjct: 248 LGHGDTLDRPV-PKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQ 306
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P + GI + + G E +VA+ G+V +WG G G LGHG E+
Sbjct: 307 QDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDEND---- 362
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ TP+++ L A + + E G +Y FG
Sbjct: 363 -----KITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFG 400
Score = 189 (71.6 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G+ +G+LG G R P V + + +A G ++ L +T+ G VY+ G
Sbjct: 241 GSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC 300
Query: 103 LGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E L+P I K++ ++++S G H+ A+ +G +Y WGK G LG G
Sbjct: 301 LGHGEQQD-ELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGD 359
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ K+ P V L+ Q ++ + GG + +G G G LG
Sbjct: 360 ENDKITP-QVLVN-LNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDK 417
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
LR PR+++ L+ +V + G H+ + + GR++ FGD
Sbjct: 418 VLR------PRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGD 456
Score = 176 (67.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 84/303 (27%), Positives = 127/303 (41%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+QI+TG +H+ I + ++Y G + +G L G + + + T +E Q +
Sbjct: 114 MQIATGKYHTLLIN-NSKVYSCGVSLSGVLAHGSETTQCVAF-TPIEFPFPAQVAQVSAT 171
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S V G+VL+ G S GH S + + P+L++ L+G K AA
Sbjct: 172 QNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPI--------FRPKLVEALKGTPCKQVAA 223
Query: 246 GFLHSACIDENGRVYIFG-------------DRAVDKML-FQE--G---NHARRPSLI-- 284
G + + G Y G DR V K++ F + G A PS +
Sbjct: 224 GLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLA 283
Query: 285 --SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD--QVSCGWKHTAAI-SEG 339
G +Y++GS N CLG G P +Q F + +VS G +H A+ S G
Sbjct: 284 VTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQA-FKRKGIHILRVSAGDEHAVALDSNG 342
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI-VNFGENVKALQVSCGFNHTGA 398
++ TWG G G LGHG++ D I P + VN N A+QV T
Sbjct: 343 RVYTWGKGYC------------GALGHGDENDKITPQVLVNLN-NCLAVQVCARKRKTFV 389
Query: 399 LLE 401
L+E
Sbjct: 390 LVE 392
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 92/350 (26%), Positives = 147/350 (42%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYH 133
+A G HTL + + VY+ G++ G L G + P+ +V Q+S +
Sbjct: 116 IATGKYHTLLINNSK-VYSCGVSLSGVLAHGSETTQCVAFTPIEFP-FPAQVAQVSATQN 173
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+ + G++ G NS+ G ++ I P VE L G KQ A G +V ++
Sbjct: 174 HSAFVLQSGQVLTCGDNSSHCCG-HLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLS 232
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSA 251
G + G+ G+LGHG + P++++ L+ G V+IAA G +
Sbjct: 233 REGHAYTCGSNTHGQLGHGD---------TLDRPVPKVVEFLKTIGPVVQIAA-GPSYVL 282
Query: 252 CIDENGRVYIFG-------------DRAVDKML--FQ-EGNHARRPS--------LISGG 287
+ ++G VY FG D +++ F+ +G H R S L S G
Sbjct: 283 AVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNG 342
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT-WGW 346
+YTWG G LG G + +P+ V + QV + T + EG +L +GW
Sbjct: 343 RVYTWGKGYCGALGHGDENDKITPQ-VLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGW 401
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
G F G G +D + P ++ + + QVS G HT
Sbjct: 402 MG----FGSLGFPDRGV----SD-KVLRPRVLECLKPHRVSQVSTGLYHT 442
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 50/187 (26%), Positives = 78/187 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDF 100
+G+G LG G + +P V AF++ + L + G H + L G VY G
Sbjct: 293 FGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYC 352
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G LG + + P + L + VQ+ + + G LY +G G LG
Sbjct: 353 GALGHGDE-NDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPD 411
Query: 160 KAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ KV+ P +ECL Q + G ++ VT G++ +G +LGH S+
Sbjct: 412 RGVSDKVLR-PRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGH---DSL 467
Query: 218 LGFLRST 224
G L T
Sbjct: 468 RGCLEPT 474
Score = 69 (29.3 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 283 LISGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
L+ GG LY +G G LG G D + P RV V QVS G HT +++
Sbjct: 390 LVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRP-RVLECLKPHRVSQVSTGLYHTIVVTQR 448
Query: 339 GKILTWGWGGSHGTFSEDGHSS 360
G+I +G+G + ++ GH S
Sbjct: 449 GRI--FGFGDNER--AQLGHDS 466
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 245 (91.3 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 68/188 (36%), Positives = 92/188 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLGLG+ ES P + + CG ++ LT G V A G N F +
Sbjct: 473 WGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNK 532
Query: 103 LGIS------ENIGY-------SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWG 148
LG+ E + Y S PL + L +E ++ + G HS+AIT G+ Y +G
Sbjct: 533 LGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFG 592
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N +GQLG + +V P +V+ L GI A G +VAV G+V SWG G GR
Sbjct: 593 SNQHGQLGTSSR--RVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGR 650
Query: 209 LGHGQESS 216
LG E +
Sbjct: 651 LGRRDEDA 658
Score = 208 (78.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 62/223 (27%), Positives = 100/223 (44%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
++K +ACG T LT+ G + G G LG N+ +P + L E+VQ++
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHG-NLTDISQPTIVEALLGYEMVQVAC 456
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G H A++ DGEL+ WG+ G+LGLG + + P +V G ++ G + S+
Sbjct: 457 GASHVLALSTDGELFAWGRGDGGRLGLGTRESH--NCPQQVPVAPGQEAQRVVCGIDSSM 514
Query: 191 AVTGGGKVLSWGAGGSGRLG--H---GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+T G+VL+ G+ +LG H +E + +TP L+ +
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDL 574
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
G HSA I +G Y FG ++ +R P + G E
Sbjct: 575 GTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLE 617
Score = 181 (68.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 65/236 (27%), Positives = 106/236 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG G+L +P + A + + +ACG +H L L+ G ++A G D G+
Sbjct: 421 FGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGR 480
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ ++ P ++ +E ++ G S +T G + G N +LGL +
Sbjct: 481 LGLGTRESHNC-PQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLS 539
Query: 162 AKVIPIPTKV--ECLSGIFTKQAA------------LGFEQSVAVTGGGKVLSWGAGGSG 207
P+P + E LS FT + LG S A+T G ++G+ G
Sbjct: 540 LDEEPVPYQQVEEALS--FTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHG 597
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LG SS R S P ++ LEG+K+ + A G + + G VY +G
Sbjct: 598 QLG---TSS-----RRVSR-APCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWG 644
Score = 146 (56.5 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 78/316 (24%), Positives = 130/316 (41%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPIPTKV- 171
PLR+ L EVVQ++ G + +T G L +W G G G A +P P V
Sbjct: 330 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG-GTLLPGAVELPQPQFVS 388
Query: 172 ---ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
E SG+ K A G + +T G ++++G+G +G LGHG + I S+
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDI-------SQ-- 439
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--D------------RAVDKMLFQE 274
P +++ L G ++ A G H + +G ++ +G D ++
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAP 499
Query: 275 GNHARR------PSLI--SGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPV 323
G A+R S+I S G + GSN LG+ + + P ++V+ S +P+
Sbjct: 500 GQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPL 559
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+ + G + S ++ G + GQLG + P V E
Sbjct: 560 GSAPLDQEPLLCVDLGTAHSAAITASGDCYTF-GSNQHGQLGTSSRRVSRAPCRVQGLEG 618
Query: 384 VKALQVSCGFNHTGAL 399
+K + V+CG T A+
Sbjct: 619 IKMVMVACGDAFTVAV 634
Score = 128 (50.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
A ++ + G+ YT+GSN++G LG S V +P RVQG V V+CG T A+
Sbjct: 577 AHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMV-MVACGDAFTVAVG 635
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+EG++ +WG G+ G +G L +D HP +V
Sbjct: 636 AEGEVYSWG-KGTRGRLGRRDEDAG--LPRPVQLDETHPYMV 674
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 250 (93.1 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 95/316 (30%), Positives = 153/316 (48%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQI 128
K + +++CG HTL LT +++ G N GQLGI EN+ S PL + L K V++I
Sbjct: 73 KRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGI-ENVVDSAVPLPVDTLSKFNVIKI 131
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI-PTKV--------ECLSGIFT 179
G + S+AIT G+LY WG ++ GQLG GK AK+ PT + E I+
Sbjct: 132 KAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQ 191
Query: 180 K----QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + ++A++ G + SWG+ G+LG G ++ P I L
Sbjct: 192 NLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGH---------CNAKLVPVPI-HL 241
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYI--FGDRAVDKMLFQE--GN-HARRPSLISGGELY 290
+ + AG ++S G + F + + +++ GN H+ +L G+L+
Sbjct: 242 DNSFER--RAGHINSL-----GEIVTTDFTAKTIHRIVVDIACGNFHSALLTL--EGDLF 292
Query: 291 TWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
WGSN+ G LG G S+D P+ V+G +++++ G HT ++ E + T+G
Sbjct: 293 LWGSNQYGQLGQGDSLDQ-SVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTFG--- 348
Query: 349 SHGTFSEDGHSS-GGQ 363
F + GH S GG+
Sbjct: 349 -SNEFYQLGHGSIGGK 363
Score = 142 (55.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 41/122 (33%), Positives = 64/122 (52%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV I+ G HS+ +T++G+L++WG N GQLG G + +P K L + + AL
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGS-LEFVKINRMAL 330
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++ +T V ++G+ +LGHG SI G R Y P I++ + + I A
Sbjct: 331 GNNHTILLTKEQDVFTFGSNEFYQLGHG---SIGGKNRL---YFPTQIQKPKVMASDIFA 384
Query: 245 AG 246
AG
Sbjct: 385 AG 386
Score = 138 (53.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 48/187 (25%), Positives = 86/187 (45%)
Query: 1 MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
++GR T + K K+ + + G + ++ + F+ G G+LG+ ++
Sbjct: 59 VMGRKHTTLFKIVWKRRV-VSVSCGFNHTLLLTSEYKIFSM--GFNQTGQLGIENVVDSA 115
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIG-YSLEPLRI 118
P+ K ++ + G + +TE G +Y G + +GQLG + N +S P I
Sbjct: 116 VPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175
Query: 119 SG-----LKKE--VVQ------ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+K+ + Q I G H+ AI+ G ++ WG N GQLGLG AK++
Sbjct: 176 LNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV 235
Query: 166 PIPTKVE 172
P+P ++
Sbjct: 236 PVPIHLD 242
Score = 96 (38.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 53/205 (25%), Positives = 92/205 (44%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+S G +HS+AI V+ E MWG+ +G+K + I K +S + GF
Sbjct: 37 QLSMGPNHSAAI-VNNECLMWGEV------MGRKHTTLFKIVWKRRVVS------VSCGF 83
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
++ +T K+ S G +G+LG + +S++ + + S++ IK V I
Sbjct: 84 NHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITE 143
Query: 245 AGFLH---SACIDE--NGRVY--------------IFGDRAVDKMLFQEGNH------AR 279
AG L+ S+ + NG++ + D D ++Q + A+
Sbjct: 144 AGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQ 203
Query: 280 RPSLISG-GELYTWGSNENGCLGIG 303
IS G +++WGSN+ G LG+G
Sbjct: 204 HTIAISTTGAIFSWGSNQYGQLGLG 228
Score = 85 (35.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 35/124 (28%), Positives = 53/124 (42%)
Query: 287 GELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCG----WKHTAAISEGK 340
G +++WGSN+ G LG+G + ++ P + F S G TA
Sbjct: 212 GAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRI 271
Query: 341 ILTWGWGGSHG---TFSED----GHSSGGQLGHGNDVDYIHP-TIVNFGENVKALQVSCG 392
++ G H T D G + GQLG G+ +D P T+ E VK +++ G
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALG 331
Query: 393 FNHT 396
NHT
Sbjct: 332 NNHT 335
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 212 (79.7 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 65/182 (35%), Positives = 91/182 (50%)
Query: 44 GNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GNGD G+LGLG LE + V + + A GG H L LT++G +Y+ G ND G
Sbjct: 48 GNGDVGQLGLGEDILERKRLSPVAGIPDAVDISA---GGMHNLVLTKSGDIYSFGCNDEG 104
Query: 102 QLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGL 157
LG SE+ G +P I L + + IS G HS+ + DG ++ WG ++S+G +GL
Sbjct: 105 ALGRDTSED-GSESKPDLID-LPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGL 162
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
K PI + + G A G + V +T GKV + G G+LG E SI
Sbjct: 163 TIDGNKRTPI----DLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSI 218
Query: 218 LG 219
G
Sbjct: 219 SG 220
Score = 157 (60.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 45/128 (35%), Positives = 70/128 (54%)
Query: 87 TETGCVYATGLNDFGQLGISENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
++T ++ATGLN+F QL E G ++L P++ K++ I+ G HH+ +T D +
Sbjct: 258 SQTQVIWATGLNNFKQLA-HETKGKEFALTPIKTE--LKDIRHIAGGQHHTVILTTDLKC 314
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ G+ G+LGLG V+ PT V+ L+ G S AVT GK+ SWG+G
Sbjct: 315 SVVGRPEYGRLGLGD-VKDVVEKPTIVKKLTEKIVS-VGCGEVCSYAVTIDGKLYSWGSG 372
Query: 205 GSGRLGHG 212
+ +LG G
Sbjct: 373 VNNQLGVG 380
Score = 144 (55.7 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 56/185 (30%), Positives = 82/185 (44%)
Query: 87 TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGEL 144
T G V G D GQLG+ E+I LE R+S + + V IS G H+ +T G++
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGEDI---LERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 145 YMWGKNSNGQLGL-----GKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
Y +G N G LG G ++ +I +P K C+S G S + G+V
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISA--------GDSHSACLLEDGRV 147
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+WG S R HG +G ++ TP I +EG A+G H + G+
Sbjct: 148 FAWG---SFRDSHGN----MGLTIDGNKRTP--IDLMEGTVCCSIASGADHLVILTTAGK 198
Query: 259 VYIFG 263
V+ G
Sbjct: 199 VFTVG 203
Score = 138 (53.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
E ++ +A G HT+ LT G ++G+LG+ + +P + L +++V +
Sbjct: 291 ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSV 350
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
G S A+T+DG+LY WG N QLG+G ++ PI
Sbjct: 351 GCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPI 389
Score = 74 (31.1 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 293 GSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
G E G LG+G + DV+ P V+ +E V V CG + A++ +GK+ +WG G ++
Sbjct: 318 GRPEYGRLGLGDVKDVVEKPTIVK-KLTEKIVS-VGCGEVCSYAVTIDGKLYSWGSGVNN 375
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
QLG G+ D + P +V
Sbjct: 376 ------------QLGVGDGDDELEPIVV 391
Score = 62 (26.9 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 287 GELYTWGSNENGCLGIGSID 306
G+LY+WGS N LG+G D
Sbjct: 364 GKLYSWGSGVNNQLGVGDGD 383
Score = 45 (20.9 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 357 GHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCG 392
G G+LG G+ D + PTIV K + V CG
Sbjct: 318 GRPEYGRLGLGDVKDVVEKPTIVK-KLTEKIVSVGCG 353
Score = 38 (18.4 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 283 LISGGELYTWGSNENGCLG 301
L + G+++T G E G LG
Sbjct: 193 LTTAGKVFTVGCAEQGQLG 211
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 216 (81.1 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 73/226 (32%), Positives = 110/226 (48%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
++ LG E ++ + G+V SWGAG G+LGHG L + E PRL++ L+G++
Sbjct: 162 RRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGT-------LEAEPE--PRLLEALQGLR 212
Query: 240 VKIAAAGFLHSACIDENGRVYIFG-----DRAVD-KMLFQEGNH-ARRPSLIS--GGELY 290
+ AAG HS C+ E G +YI+G A+ K L ++G A S + G E+
Sbjct: 213 MAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEASGLEEDGSEVK 272
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 348
+ E+G I V P + P SE+ +VSCG +HTA ++ G++ TWGWG
Sbjct: 273 RGSAGEDGAPA-PFIAVQPFPALLDLSPGSEAV--KVSCGSRHTAVLTRTGELYTWGWG- 328
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCG 392
GQLGH + P V + + ++ VSCG
Sbjct: 329 -----------KYGQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCG 363
Score = 163 (62.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 50/175 (28%), Positives = 82/175 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ L+ETG +Y G N+ GQ
Sbjct: 183 WGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQ 242
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + SL E + + G +S + DG G S G+ G
Sbjct: 243 LALPTK---SLA---------EDGKTTAG--EASGLEEDGSEVKRG--SAGEDGAPAPFI 286
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
V P P ++ G + + G + +T G++ +WG G G+LGH +++
Sbjct: 287 AVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTL 341
Score = 149 (57.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 65/227 (28%), Positives = 100/227 (44%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G H+ + G+++ WG +GQLG G A+ P P +E L G+ + A G
Sbjct: 163 RLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAE--PEPRLLEALQGLRMAEVAAGG 220
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SV ++ G + WG SG+L +S + ++T+ L E +G +VK +AG
Sbjct: 221 WHSVCLSETGDIYIWGWNESGQLALPTKS-LAEDGKTTAGEASGL--EEDGSEVKRGSAG 277
Query: 247 FLHSACIDENGRVYIF-GDRAVDKML-FQEGNHARRPS--------LISGGELYTWGSNE 296
E+G F + +L G+ A + S L GELYTWG +
Sbjct: 278 --------EDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGK 329
Query: 297 NGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCG-WK-HTAAISEGK 340
G LG L P RV+ + V VSCG W + A+ + K
Sbjct: 330 YGQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNTYVYAVEKEK 376
Score = 120 (47.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGY 132
+ L G H L L G V++ G GQLG + EP + L+ + +++ G
Sbjct: 162 RRLELGAEHALLLDAAGQVFSWGAGRHGQLGHG-TLEAEPEPRLLEALQGLRMAEVAAGG 220
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
HS ++ G++Y+WG N +GQL L K+
Sbjct: 221 WHSVCLSETGDIYIWGWNESGQLALPTKS 249
Score = 59 (25.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 90 GCVYATGLNDFGQL---GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
G + G FGQ G+ + +S EPLR G V ++S + +++ +T G + +
Sbjct: 7 GTWFGFGFCGFGQALGSGLGRQV-HSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRVQL 65
Query: 147 WG 148
G
Sbjct: 66 SG 67
Score = 55 (24.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 348 GSHGTFSEDGHS-SGGQLGH-GNDVDYI----HPTIVNFGENVKALQVSCGFNHTGAL 399
G EDG G G G +I P +++ +A++VSCG HT L
Sbjct: 259 GEASGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVL 316
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 209 (78.6 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 73/244 (29%), Positives = 108/244 (44%)
Query: 162 AKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A V P P + L+ + +Q LG E + + G+V SWGAG G+LGHG +
Sbjct: 145 AYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEA---- 200
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEG--N 276
E PRL++ L+G+++ AAG HS C+ E G +YI+G ++ + G N
Sbjct: 201 -----ELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTEN 255
Query: 277 HARRPSLISGGELYTWGSNENGCLG-IGS----IDVLHSPERVQGPFSESPVDQVSCGWK 331
A R EL G E + G+ I + P + P V SCG +
Sbjct: 256 KAEREEAT---ELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAV-MASCGSR 311
Query: 332 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQ 388
HTA ++ G++ TWGWG GQLGH + P V + ++
Sbjct: 312 HTAVVTRTGELYTWGWG------------KYGQLGHKDSTSLDRPCCVEYFVERQLEVRA 359
Query: 389 VSCG 392
V+CG
Sbjct: 360 VTCG 363
Score = 135 (52.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 57/211 (27%), Positives = 92/211 (43%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V Q+ G H + G+++ WG +GQLG G A++ P +E L G+ + A
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEP--RLLEALQGLRMAKVAA 220
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G SV ++ G + WG SG+L S ++ E L ++ ++ +A
Sbjct: 221 GGWHSVCLSETGDIYIWGWNESGQLALPTRSGTEN--KAEREEATELNEDGLKEELAVAD 278
Query: 245 AGF-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG-GELYTWGSNENGCLGI 302
AG H I + D ++ G+ R ++++ GELYTWG + G LG
Sbjct: 279 AGAPAHFIAIQPFPALLDL-PLGSDAVMASCGS--RHTAVVTRTGELYTWGWGKYGQLGH 335
Query: 303 GSIDVLHSPERVQGPFSESPVD--QVSCG-W 330
L P V+ F E ++ V+CG W
Sbjct: 336 KDSTSLDRPCCVEY-FVERQLEVRAVTCGPW 365
Score = 134 (52.2 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ L+ETG +Y G N+ GQ
Sbjct: 185 WGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQ 244
Query: 103 LGI-----SENIGYSLEPLRIS--GLKKEVVQISTG 131
L + +EN E ++ GLK+E+ G
Sbjct: 245 LALPTRSGTENKAEREEATELNEDGLKEELAVADAG 280
Score = 124 (48.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
++ L G H L L G V++ G GQLG + LEP + L+ + +++ G
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG-TLEAELEPRLLEALQGLRMAKVAAG 221
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL 157
HS ++ G++Y+WG N +GQL L
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLAL 247
Score = 67 (28.6 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 90 GCVYATGLNDFGQL---GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
G + G FGQ G S + YS EPL S ++ Q+S G+ +++ +T G + +
Sbjct: 7 GAWFGFGFCGFGQALGSGNSHHSVYSPEPLHASD---DICQVSAGWSYTALVTRGGRVEL 63
Query: 147 WGKNSNGQLG 156
G S G
Sbjct: 64 SGSVSGAADG 73
Score = 39 (18.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +++ A+ SCG HT +
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVV 316
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 247 (92.0 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 104/344 (30%), Positives = 147/344 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPV--VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LG G+ SR +PV V A+A GG H L L G ++A G N
Sbjct: 159 WGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLT 218
Query: 101 GQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG I + PL+I G ++ IS G HS A+ DG L+ WG+N G+LG G
Sbjct: 219 GQLGTGGTGILPNPTPLKI-GTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNGV 277
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ PT+V +G A G +VA+ G V +WG G +G G ++
Sbjct: 278 ALPGANVTTPTRVG--TGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVAN-- 333
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
RST + + V + AAG S + NG V+ +G ++
Sbjct: 334 ---RSTPTLIVAPVTLVNNVAI---AAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAV 387
Query: 279 RRPSLISGGELYTWGSNENGC--LGIGSIDVLH------SPERVQGPFSES--PVDQVS- 327
P+++S G G G LG+ S L S + G + S PV V
Sbjct: 388 TAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGG 447
Query: 328 CG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
G W+ TA + + + GT G +S GQLG G+ V
Sbjct: 448 AGNWRTTATGTAHSVAV----RADGTLWAWGDNSSGQLGIGSTV 487
Score = 238 (88.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 99/377 (26%), Positives = 170/377 (45%)
Query: 37 RRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
R LW G+ +G+LG G+ +R PV + K +A G H+L + G ++A
Sbjct: 48 RSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG----TWKTVAAGTTHSLGIKADGSLWA 103
Query: 95 TGLNDFGQLG---ISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G N FGQLG ++ + + P+RI G + V +S G S + DG L+ WG N
Sbjct: 104 WGSNLFGQLGQPLVNGQLATNKFSPIRI-GTGNDWVAVSAGELTSFGLKGDGTLWSWGNN 162
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G ++ P+ + LS G + AA G E ++A+ G + +WGA +G+L
Sbjct: 163 LFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAA-GGEHALALQADGTLWAWGANLTGQL 221
Query: 210 GHGQESSILGFLRSTSEYTPRLI-KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
G G G L + TP I + + + +AG +HS + +G ++ +G
Sbjct: 222 GTGGT----GILPNP---TPLKIGTDRDWTAI---SAGEMHSVALKADGSLWSWGQNLFG 271
Query: 269 KM---LFQEGNHARRPS---------LISGGELYT-----------WGSNENGCLGIGSI 305
++ + G + P+ I+ G L+T WG+N G +G G++
Sbjct: 272 ELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTV 331
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQL 364
+P + P + ++ G + + ++ G + +GWGG+ GQL
Sbjct: 332 ANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTV--FGWGGN----------GAGQL 379
Query: 365 GHGNDVDYIHPTIVNFG 381
G+G PT+++ G
Sbjct: 380 GNGTFGAVTAPTVLSAG 396
Score = 207 (77.9 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 69/228 (30%), Positives = 103/228 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + P V SA L + GGA +L L G ++A G N GQ
Sbjct: 371 WGGNGAGQLGNGTFGAVTAPTVLSAGASAWL-GVEPGGAFSLGLRSNGTLWAWGGNASGQ 429
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+ + G +TG HS A+ DG L+ WG NS+GQLG+G A
Sbjct: 430 LGDGTTTPSAI-PVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVA 488
Query: 163 KVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P I +G A G S+ + G + SWG G+LG G +S
Sbjct: 489 ASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSN--- 545
Query: 221 LRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
R+T + + V +AA G + S + +G ++ +GD ++
Sbjct: 546 -RTTPVQIVTGNPGNFDRNWVAVAAGG-VFSLALQADGTIWTWGDNSL 591
Score = 200 (75.5 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRP----VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG+ G+LG+GS + P V A + A+A GGAH+L L G +++ G N
Sbjct: 473 WGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDN 532
Query: 99 DFGQLGISENIGYSLEPLRI-SG----LKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
FGQLG P++I +G + V ++ G S A+ DG ++ WG NS
Sbjct: 533 TFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLL 592
Query: 154 QLG-----LGKKAAKVIPIPTKVECL-SGIFTKQ---AALGFEQSVAVTGGGKVLSWGAG 204
QLG L + +P V S F A G + +++ G + +WGA
Sbjct: 593 QLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGAN 652
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG+G +T+ +TP + EGV AAG HS +G ++ +G+
Sbjct: 653 SVGQLGNGV---------TTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGN 703
Score = 195 (73.7 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 69/242 (28%), Positives = 102/242 (42%)
Query: 43 WGNGDYGRLGLGS-LESRWRPV-VCSA----FEKHSLKALACGGAHTLFLTETGCVYATG 96
WG+ +G+LG G+ +R PV + + F+++ + A+A GG +L L G ++ G
Sbjct: 529 WGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWV-AVAAGGVFSLALQADGTIWTWG 587
Query: 97 LNDFGQLGIS---------ENIGYSLEPLR--ISGLKKEVVQISTGYHHSSAITVDGELY 145
N QLG N+ L + V I+ G H ++ DG L+
Sbjct: 588 DNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLW 647
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
WG NS GQLG G A P+ +V G+ A G S+A G + +WG
Sbjct: 648 AWGANSVGQLGNGVTTATFTPV--QVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNT 705
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK----IAAAGFLHSACIDENGRVYI 261
SG+LG G L P I V +A AG HSA + NG ++
Sbjct: 706 SGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWT 765
Query: 262 FG 263
+G
Sbjct: 766 WG 767
Score = 194 (73.4 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 64/229 (27%), Positives = 102/229 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN G +G G++ +R P ++ + + A+A G + + G V+ G N G
Sbjct: 318 WGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAG 377
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + G P +S + + G S + +G L+ WG N++GQLG G
Sbjct: 378 QLG-NGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTT 436
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
IP+P V +G + + A G SVAV G + +WG SG+LG G S++
Sbjct: 437 PSAIPVP--VVGGAGNW-RTTATGTAHSVAVRADGTLWAWGDNSSGQLGIG--STVAA-- 489
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
ST + G A G HS + +G ++ +GD ++
Sbjct: 490 -STPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQL 537
Score = 177 (67.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 83/321 (25%), Positives = 132/321 (41%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A GG H L L G ++A G N FGQLG I + P+++ G K V + G HS
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT-SPVQVPGTWKTV---AAGTTHS 92
Query: 136 SAITVDGELYMWGKNSNGQLGL----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
I DG L+ WG N GQLG G+ A P ++ +G + G S
Sbjct: 93 LGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFS-PIRIG--TGNDWVAVSAGELTSFG 149
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G G + SWG G LG G +++ S + + L + AAG H+
Sbjct: 150 LKGDGTLWSWGNNLFGELGDG--TTV-----SRPQPVQVVADPLSNGRYVAVAAGGEHAL 202
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPS-----------LISGGELYTWGSNENGCL 300
+ +G ++ +G ++ P+ IS GE+++ +G L
Sbjct: 203 ALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSL 262
Query: 301 ---GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
G L + + G +P +V G AI+ G + T +GT S G
Sbjct: 263 WSWGQNLFGELGNGVALPGANVTTPT-RVGTG-SDWVAIAAGALHTVALH-RNGTVSAWG 319
Query: 358 HSSGGQLGHGNDVDYIHPTIV 378
+++ G +G G + PT++
Sbjct: 320 NNAQGAVGDGTVANRSTPTLI 340
Score = 163 (62.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 48/159 (30%), Positives = 72/159 (45%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-E 124
+AF S A+A G H L L G ++A G N GQLG + P+++ +
Sbjct: 621 TAFNS-SWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTA-TFTPVQVINAEGVP 678
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-------IPTKVECLSGI 177
V ++ G HS A DG L+ WG N++GQLG G P +P ++ + +
Sbjct: 679 YVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPV 738
Query: 178 FTKQ----AALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
A G S A+ G + +WG SG+LG+G
Sbjct: 739 SAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNG 777
Score = 149 (57.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 78/303 (25%), Positives = 132/303 (43%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V ++ G +H + DG L+ G N GQLG G + P+ + G + K A
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQ-----VPGTW-KTVAA 87
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S+ + G + +WG+ G+LG + + G L +T++++P I+ G +
Sbjct: 88 GTTHSLGIKADGSLWAWGSNLFGQLG---QPLVNGQL-ATNKFSP--IRIGTGNDWVAVS 141
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP----------------SLISGGE 288
AG L S + +G ++ +G+ ++ +G RP ++ +GGE
Sbjct: 142 AGELTSFGLKGDGTLWSWGNNLFGEL--GDGTTVSRPQPVQVVADPLSNGRYVAVAAGGE 199
Query: 289 ----------LYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAI- 336
L+ WG+N G LG G +L +P ++ G ++ +S G H+ A+
Sbjct: 200 HALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIG--TDRDWTAISAGEMHSVALK 257
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
++G + W WG F E G+ G L N PT V G + A ++ G HT
Sbjct: 258 ADGSL--WSWG--QNLFGELGN--GVALPGANVTT---PTRVGTGSDWVA--IAAGALHT 306
Query: 397 GAL 399
AL
Sbjct: 307 VAL 309
Score = 145 (56.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 62/243 (25%), Positives = 103/243 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ PV + + A G AH++ + G ++A G N GQ
Sbjct: 422 WGGNASGQLGDGTTTPSAIPVPVVG-GAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQ 480
Query: 103 LGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LGI + S P +I+ + ++ G HS + DG L+ WG N+ GQLG
Sbjct: 481 LGIGSTVAAST-PQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGD 539
Query: 158 GKKAA-KVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G + + P+ V G F + A G S+A+ G + +WG +LG
Sbjct: 540 GTGTSNRTTPVQI-VTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLG--T 596
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVK-----IA-AAGFLHSACIDENGRVYIFGDRAV 267
+ ++L +T P + +A AAG H + +G ++ +G +V
Sbjct: 597 DPAML--TPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSV 654
Query: 268 DKM 270
++
Sbjct: 655 GQL 657
Score = 133 (51.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G + + PV E +LA G +H+L G ++A G N GQ
Sbjct: 649 WGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQ 708
Query: 103 LGISENIG----YSLEPLRISG--LKKEVVQ------IST-GYHHSSAITVDGELYMWGK 149
LG + G + +P + L V ++T G HS+A+ +G L+ WG+
Sbjct: 709 LGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQ 768
Query: 150 NSNGQLGLGKKAAKVIP 166
N++GQLG G IP
Sbjct: 769 NTSGQLGNGTTTEADIP 785
Score = 90 (36.7 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 30/98 (30%), Positives = 45/98 (45%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGK 340
SL + G L+ WG+N G LG G +P +V P ++ G H+ A S+G
Sbjct: 639 SLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINA-EGVPYVSLAAGTSHSLAGRSDGT 697
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLG---HGNDVDYIHP 375
+ W WG +++ GQLG H D D ++P
Sbjct: 698 L--WAWG----------NNTSGQLGTGPHPGDADPLNP 723
Score = 82 (33.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 32/104 (30%), Positives = 44/104 (42%)
Query: 285 SGGELYTWGSNENGCLGIG----SIDVL----HS-PERVQGPFSESPVDQ---VSCGWKH 332
S G L+ WG+N +G LG G D L H+ P R+ S D + G H
Sbjct: 694 SDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSH 753
Query: 333 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+AA+ L W WG ++ GQLG+G + PT
Sbjct: 754 SAALKSNGTL-WTWG----------QNTSGQLGNGTTTEADIPT 786
Score = 73 (30.8 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 20/58 (34%), Positives = 26/58 (44%)
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESP 322
A D L + +L S G L+TWG N +G LG G+ P + P S SP
Sbjct: 740 AADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTALLEPRISVSP 797
Score = 71 (30.1 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 32/121 (26%), Positives = 54/121 (44%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSP--ER---VQGPFSESPVDQVSCGWKHTAAI 336
+L + G ++TWG +N L +G+ + +P +R Q + P + W AI
Sbjct: 576 ALQADGTIWTWG--DNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSW---VAI 630
Query: 337 SEGKILTWGWG-GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+ G+ G + GT G +S GQLG+G P V E V + ++ G +H
Sbjct: 631 AAGQ--DHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSH 688
Query: 396 T 396
+
Sbjct: 689 S 689
Score = 66 (28.3 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERV----QGPFSESPVDQVSCG 329
G A L + G L++WG N G LG G+ +P ++ G F + V V+ G
Sbjct: 512 GGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWV-AVAAG 570
Query: 330 WKHTAAI-SEGKILTWG 345
+ A+ ++G I TWG
Sbjct: 571 GVFSLALQADGTIWTWG 587
Score = 44 (20.5 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 333 TAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
T ++G+ILT G+ TF G ++GG
Sbjct: 1322 TVVGTDGEILTSEDAGTTWTFRTSGLAAGG 1351
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 247 (92.0 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 104/344 (30%), Positives = 147/344 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPV--VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LG G+ SR +PV V A+A GG H L L G ++A G N
Sbjct: 159 WGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLT 218
Query: 101 GQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG I + PL+I G ++ IS G HS A+ DG L+ WG+N G+LG G
Sbjct: 219 GQLGTGGTGILPNPTPLKI-GTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNGV 277
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ PT+V +G A G +VA+ G V +WG G +G G ++
Sbjct: 278 ALPGANVTTPTRVG--TGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVAN-- 333
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
RST + + V + AAG S + NG V+ +G ++
Sbjct: 334 ---RSTPTLIVAPVTLVNNVAI---AAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAV 387
Query: 279 RRPSLISGGELYTWGSNENGC--LGIGSIDVLH------SPERVQGPFSES--PVDQVS- 327
P+++S G G G LG+ S L S + G + S PV V
Sbjct: 388 TAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGG 447
Query: 328 CG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
G W+ TA + + + GT G +S GQLG G+ V
Sbjct: 448 AGNWRTTATGTAHSVAV----RADGTLWAWGDNSSGQLGIGSTV 487
Score = 238 (88.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 99/377 (26%), Positives = 170/377 (45%)
Query: 37 RRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
R LW G+ +G+LG G+ +R PV + K +A G H+L + G ++A
Sbjct: 48 RSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG----TWKTVAAGTTHSLGIKADGSLWA 103
Query: 95 TGLNDFGQLG---ISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G N FGQLG ++ + + P+RI G + V +S G S + DG L+ WG N
Sbjct: 104 WGSNLFGQLGQPLVNGQLATNKFSPIRI-GTGNDWVAVSAGELTSFGLKGDGTLWSWGNN 162
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G ++ P+ + LS G + AA G E ++A+ G + +WGA +G+L
Sbjct: 163 LFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAA-GGEHALALQADGTLWAWGANLTGQL 221
Query: 210 GHGQESSILGFLRSTSEYTPRLI-KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
G G G L + TP I + + + +AG +HS + +G ++ +G
Sbjct: 222 GTGGT----GILPNP---TPLKIGTDRDWTAI---SAGEMHSVALKADGSLWSWGQNLFG 271
Query: 269 KM---LFQEGNHARRPS---------LISGGELYT-----------WGSNENGCLGIGSI 305
++ + G + P+ I+ G L+T WG+N G +G G++
Sbjct: 272 ELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTV 331
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQL 364
+P + P + ++ G + + ++ G + +GWGG+ GQL
Sbjct: 332 ANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTV--FGWGGN----------GAGQL 379
Query: 365 GHGNDVDYIHPTIVNFG 381
G+G PT+++ G
Sbjct: 380 GNGTFGAVTAPTVLSAG 396
Score = 207 (77.9 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 69/228 (30%), Positives = 103/228 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + P V SA L + GGA +L L G ++A G N GQ
Sbjct: 371 WGGNGAGQLGNGTFGAVTAPTVLSAGASAWL-GVEPGGAFSLGLRSNGTLWAWGGNASGQ 429
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+ + G +TG HS A+ DG L+ WG NS+GQLG+G A
Sbjct: 430 LGDGTTTPSAI-PVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVA 488
Query: 163 KVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P I +G A G S+ + G + SWG G+LG G +S
Sbjct: 489 ASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSN--- 545
Query: 221 LRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
R+T + + V +AA G + S + +G ++ +GD ++
Sbjct: 546 -RTTPVQIVTGNPGNFDRNWVAVAAGG-VFSLALQADGTIWTWGDNSL 591
Score = 200 (75.5 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRP----VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG+ G+LG+GS + P V A + A+A GGAH+L L G +++ G N
Sbjct: 473 WGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDN 532
Query: 99 DFGQLGISENIGYSLEPLRI-SG----LKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
FGQLG P++I +G + V ++ G S A+ DG ++ WG NS
Sbjct: 533 TFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLL 592
Query: 154 QLG-----LGKKAAKVIPIPTKVECL-SGIFTKQ---AALGFEQSVAVTGGGKVLSWGAG 204
QLG L + +P V S F A G + +++ G + +WGA
Sbjct: 593 QLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGAN 652
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG+G +T+ +TP + EGV AAG HS +G ++ +G+
Sbjct: 653 SVGQLGNGV---------TTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGN 703
Score = 195 (73.7 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 69/242 (28%), Positives = 102/242 (42%)
Query: 43 WGNGDYGRLGLGS-LESRWRPV-VCSA----FEKHSLKALACGGAHTLFLTETGCVYATG 96
WG+ +G+LG G+ +R PV + + F+++ + A+A GG +L L G ++ G
Sbjct: 529 WGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWV-AVAAGGVFSLALQADGTIWTWG 587
Query: 97 LNDFGQLGIS---------ENIGYSLEPLR--ISGLKKEVVQISTGYHHSSAITVDGELY 145
N QLG N+ L + V I+ G H ++ DG L+
Sbjct: 588 DNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLW 647
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
WG NS GQLG G A P+ +V G+ A G S+A G + +WG
Sbjct: 648 AWGANSVGQLGNGVTTATFTPV--QVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNT 705
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK----IAAAGFLHSACIDENGRVYI 261
SG+LG G L P I V +A AG HSA + NG ++
Sbjct: 706 SGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWT 765
Query: 262 FG 263
+G
Sbjct: 766 WG 767
Score = 194 (73.4 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 64/229 (27%), Positives = 102/229 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN G +G G++ +R P ++ + + A+A G + + G V+ G N G
Sbjct: 318 WGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAG 377
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + G P +S + + G S + +G L+ WG N++GQLG G
Sbjct: 378 QLG-NGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTT 436
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
IP+P V +G + + A G SVAV G + +WG SG+LG G S++
Sbjct: 437 PSAIPVP--VVGGAGNW-RTTATGTAHSVAVRADGTLWAWGDNSSGQLGIG--STVAA-- 489
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
ST + G A G HS + +G ++ +GD ++
Sbjct: 490 -STPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQL 537
Score = 177 (67.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 83/321 (25%), Positives = 132/321 (41%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A GG H L L G ++A G N FGQLG I + P+++ G K V + G HS
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT-SPVQVPGTWKTV---AAGTTHS 92
Query: 136 SAITVDGELYMWGKNSNGQLGL----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
I DG L+ WG N GQLG G+ A P ++ +G + G S
Sbjct: 93 LGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFS-PIRIG--TGNDWVAVSAGELTSFG 149
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G G + SWG G LG G +++ S + + L + AAG H+
Sbjct: 150 LKGDGTLWSWGNNLFGELGDG--TTV-----SRPQPVQVVADPLSNGRYVAVAAGGEHAL 202
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPS-----------LISGGELYTWGSNENGCL 300
+ +G ++ +G ++ P+ IS GE+++ +G L
Sbjct: 203 ALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSL 262
Query: 301 ---GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
G L + + G +P +V G AI+ G + T +GT S G
Sbjct: 263 WSWGQNLFGELGNGVALPGANVTTPT-RVGTG-SDWVAIAAGALHTVALH-RNGTVSAWG 319
Query: 358 HSSGGQLGHGNDVDYIHPTIV 378
+++ G +G G + PT++
Sbjct: 320 NNAQGAVGDGTVANRSTPTLI 340
Score = 163 (62.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 48/159 (30%), Positives = 72/159 (45%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-E 124
+AF S A+A G H L L G ++A G N GQLG + P+++ +
Sbjct: 621 TAFNS-SWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTA-TFTPVQVINAEGVP 678
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-------IPTKVECLSGI 177
V ++ G HS A DG L+ WG N++GQLG G P +P ++ + +
Sbjct: 679 YVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPV 738
Query: 178 FTKQ----AALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
A G S A+ G + +WG SG+LG+G
Sbjct: 739 SAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNG 777
Score = 149 (57.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 78/303 (25%), Positives = 132/303 (43%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V ++ G +H + DG L+ G N GQLG G + P+ + G + K A
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQ-----VPGTW-KTVAA 87
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S+ + G + +WG+ G+LG + + G L +T++++P I+ G +
Sbjct: 88 GTTHSLGIKADGSLWAWGSNLFGQLG---QPLVNGQL-ATNKFSP--IRIGTGNDWVAVS 141
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP----------------SLISGGE 288
AG L S + +G ++ +G+ ++ +G RP ++ +GGE
Sbjct: 142 AGELTSFGLKGDGTLWSWGNNLFGEL--GDGTTVSRPQPVQVVADPLSNGRYVAVAAGGE 199
Query: 289 ----------LYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAI- 336
L+ WG+N G LG G +L +P ++ G ++ +S G H+ A+
Sbjct: 200 HALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIG--TDRDWTAISAGEMHSVALK 257
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
++G + W WG F E G+ G L N PT V G + A ++ G HT
Sbjct: 258 ADGSL--WSWG--QNLFGELGN--GVALPGANVTT---PTRVGTGSDWVA--IAAGALHT 306
Query: 397 GAL 399
AL
Sbjct: 307 VAL 309
Score = 145 (56.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 62/243 (25%), Positives = 103/243 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ PV + + A G AH++ + G ++A G N GQ
Sbjct: 422 WGGNASGQLGDGTTTPSAIPVPVVG-GAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQ 480
Query: 103 LGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LGI + S P +I+ + ++ G HS + DG L+ WG N+ GQLG
Sbjct: 481 LGIGSTVAAST-PQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGD 539
Query: 158 GKKAA-KVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G + + P+ V G F + A G S+A+ G + +WG +LG
Sbjct: 540 GTGTSNRTTPVQI-VTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLG--T 596
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVK-----IA-AAGFLHSACIDENGRVYIFGDRAV 267
+ ++L +T P + +A AAG H + +G ++ +G +V
Sbjct: 597 DPAML--TPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSV 654
Query: 268 DKM 270
++
Sbjct: 655 GQL 657
Score = 133 (51.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G + + PV E +LA G +H+L G ++A G N GQ
Sbjct: 649 WGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQ 708
Query: 103 LGISENIG----YSLEPLRISG--LKKEVVQ------IST-GYHHSSAITVDGELYMWGK 149
LG + G + +P + L V ++T G HS+A+ +G L+ WG+
Sbjct: 709 LGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQ 768
Query: 150 NSNGQLGLGKKAAKVIP 166
N++GQLG G IP
Sbjct: 769 NTSGQLGNGTTTEADIP 785
Score = 90 (36.7 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 30/98 (30%), Positives = 45/98 (45%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGK 340
SL + G L+ WG+N G LG G +P +V P ++ G H+ A S+G
Sbjct: 639 SLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINA-EGVPYVSLAAGTSHSLAGRSDGT 697
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLG---HGNDVDYIHP 375
+ W WG +++ GQLG H D D ++P
Sbjct: 698 L--WAWG----------NNTSGQLGTGPHPGDADPLNP 723
Score = 82 (33.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 32/104 (30%), Positives = 44/104 (42%)
Query: 285 SGGELYTWGSNENGCLGIG----SIDVL----HS-PERVQGPFSESPVDQ---VSCGWKH 332
S G L+ WG+N +G LG G D L H+ P R+ S D + G H
Sbjct: 694 SDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSH 753
Query: 333 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+AA+ L W WG ++ GQLG+G + PT
Sbjct: 754 SAALKSNGTL-WTWG----------QNTSGQLGNGTTTEADIPT 786
Score = 73 (30.8 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 20/58 (34%), Positives = 26/58 (44%)
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESP 322
A D L + +L S G L+TWG N +G LG G+ P + P S SP
Sbjct: 740 AADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTALLEPRISVSP 797
Score = 71 (30.1 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 32/121 (26%), Positives = 54/121 (44%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSP--ER---VQGPFSESPVDQVSCGWKHTAAI 336
+L + G ++TWG +N L +G+ + +P +R Q + P + W AI
Sbjct: 576 ALQADGTIWTWG--DNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSW---VAI 630
Query: 337 SEGKILTWGWG-GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+ G+ G + GT G +S GQLG+G P V E V + ++ G +H
Sbjct: 631 AAGQ--DHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSH 688
Query: 396 T 396
+
Sbjct: 689 S 689
Score = 66 (28.3 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERV----QGPFSESPVDQVSCG 329
G A L + G L++WG N G LG G+ +P ++ G F + V V+ G
Sbjct: 512 GGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWV-AVAAG 570
Query: 330 WKHTAAI-SEGKILTWG 345
+ A+ ++G I TWG
Sbjct: 571 GVFSLALQADGTIWTWG 587
Score = 44 (20.5 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 333 TAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
T ++G+ILT G+ TF G ++GG
Sbjct: 1322 TVVGTDGEILTSEDAGTTWTFRTSGLAAGG 1351
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 201 (75.8 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 73/245 (29%), Positives = 109/245 (44%)
Query: 161 AAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A V P P L+ ++ LG E ++ + G+V SWG G G+LGHG
Sbjct: 147 SAYVSPQPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT------ 200
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----DRAVD-KMLFQ 273
L + E PR+++ L+G+ + AAG HS C+ E G +YI+G A+ + L +
Sbjct: 201 -LEAERE--PRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPARSLAE 257
Query: 274 EGNHAR--RPSLIS-GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
+G P L G E E+G I V P + P V + SCG
Sbjct: 258 DGKTITGDAPGLNEDGSEAKRATEGEDGG-PTPFIAVQPFPALLDLPLGSDAV-KASCGS 315
Query: 331 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKAL 387
+HTA ++ G++ TWGWG GQLGH + P V + + ++
Sbjct: 316 RHTAVVTRTGELYTWGWG------------KYGQLGHKDTTSLDRPCRVEYFVDKQLQVR 363
Query: 388 QVSCG 392
VSCG
Sbjct: 364 TVSCG 368
Score = 133 (51.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 61/226 (26%), Positives = 95/226 (42%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G H+ + G+++ WG +GQLG G A+ P +E L G+ + A G
Sbjct: 168 RLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAE--REPRVLEALQGLPMAEVAAGG 225
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SV V+ G + WG SG+L S T + P L ++ G + K A G
Sbjct: 226 WHSVCVSETGDIYIWGWNESGQLALPARSLAEDGKTITGD-APGLNED--GSEAKRATEG 282
Query: 247 FLHSACIDENGRVYIFGDRAVDKML-FQEGNHA-------RRPSLISG-GELYTWGSNEN 297
++ G + +L G+ A R ++++ GELYTWG +
Sbjct: 283 -------EDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKY 335
Query: 298 GCLGIGSIDVLHSPERVQGPFSES-PVDQVSCG-WK-HTAAISEGK 340
G LG L P RV+ + V VSCG W + A+ + K
Sbjct: 336 GQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCGPWNTYVFAVEKEK 381
Score = 129 (50.5 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P V A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 188 WGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 247
Query: 103 LGI 105
L +
Sbjct: 248 LAL 250
Score = 114 (45.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGY 132
+ L G H L L G V++ G GQLG + EP + L+ + +++ G
Sbjct: 167 RRLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAEREPRVLEALQGLPMAEVAAGG 225
Query: 133 HHSSAITVDGELYMWGKNSNGQLGL 157
HS ++ G++Y+WG N +GQL L
Sbjct: 226 WHSVCVSETGDIYIWGWNESGQLAL 250
Score = 86 (35.3 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L + V+ S G H++ +T GELY WG GQLG K + P +VE
Sbjct: 304 LGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG--HKDTTSLDRPCRVE 353
Score = 75 (31.5 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 22/69 (31%), Positives = 33/69 (47%)
Query: 90 GCVYATGLNDFGQ-LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
G + G FGQ LG YS EPL + G +V ++S + +++ +T G L +
Sbjct: 7 GAWFGFGFCGFGQALGSGRGRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRLELS 66
Query: 148 GKNSNGQLG 156
G S G G
Sbjct: 67 GSVS-GSAG 74
Score = 46 (21.3 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP--TIVNFGENVKALQVSCGFNH 395
+GK +T G + SE ++ G+ G + P +++ A++ SCG H
Sbjct: 258 DGKTITGDAPGLNEDGSEAKRATEGEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRH 317
Query: 396 TGAL 399
T +
Sbjct: 318 TAVV 321
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 183 (69.5 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 51/160 (31%), Positives = 83/160 (51%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVY--ATGLNDFGQL---GISENIGYSL-EPLRI 118
C K + +A G H + T +G V+ TGL G+ G + + ++ EP R+
Sbjct: 11 CHMLHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRV 70
Query: 119 SGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+GL+ + + + G HS+++T GE+Y+WG N +GQL +AA +P+P K+E
Sbjct: 71 TGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA--NEAA-FLPVPQKIEAHCFQ 127
Query: 178 FTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
K A+ G+ VA T GK+ +WG G+LG E+
Sbjct: 128 NEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLET 167
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 60/241 (24%), Positives = 98/241 (40%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA--KVIPI------PTKVEC 173
K++VV I+ G H+ A T G ++ WG G G++ + +P+ P++V
Sbjct: 16 KEKVVCIAAGLRHAVAATASGIVFQWG---TGLASCGRRLCPGQTLPLFFTAKEPSRVTG 72
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L G + S ++T G+V WG+ HGQ ++ FL P+ I+
Sbjct: 73 LENSKAMCVLAGSDHSASLTDAGEVYVWGSNK-----HGQLANEAAFLP-----VPQKIE 122
Query: 234 E--LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
+ KV +G+ H E G+++ +G RA G R+ G +L
Sbjct: 123 AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG-RA------DYGQLGRKLETYEGWKL-- 173
Query: 292 WGSNENGCLGIGSIDVLHSPERV-QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 350
++ L P + P + +VSCG +H AI G +WGW H
Sbjct: 174 --EKQDSFLPCS-----RPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVCYSWGWN-EH 225
Query: 351 G 351
G
Sbjct: 226 G 226
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG- 120
P + E + G H+ LT+ G VY G N GQL + + P +I
Sbjct: 67 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL--ANEAAFLPVPQKIEAH 124
Query: 121 --LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAK---VIPI-- 167
++V I +G+ H A T G+++ WG+ GQLG G K K +P
Sbjct: 125 CFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSR 184
Query: 168 -PTKVECLSGIFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P + T + + G E ++A+ GG SWG G G G E+++
Sbjct: 185 PPNSMPSSPHCLTGATEVSCGSEHNLAIIGG-VCYSWGWNEHGMCGDGTEANV 236
Score = 88 (36.0 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
I GG Y+WG NE+G G G+ + +P+ VQ S S + V CG H+ A+ +
Sbjct: 212 IIGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGL-LVGCGAGHSLALCQ 265
Score = 82 (33.9 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 35/130 (26%), Positives = 48/130 (36%)
Query: 287 GELYTWGSNENGCLG----------IGSIDVLHSPERVQGPFSESP-----VDQVSCGWK 331
G+++TWG + G LG + D R SP +VSCG +
Sbjct: 148 GKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSE 207
Query: 332 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
H AI G +WGW HG G G + + P V + L V C
Sbjct: 208 HNLAIIGGVCYSWGWN-EHG-----------MCGDGTEANVWAPKPVQALLSSSGLLVGC 255
Query: 392 GFNHTGALLE 401
G H+ AL +
Sbjct: 256 GAGHSLALCQ 265
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 240 (89.5 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 71/218 (32%), Positives = 107/218 (49%)
Query: 65 CSAFEKHSLKALACGGAHTLFLT--ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
C EK S+ + CG H+L L+ + G ++A G N GQLG+ P + L
Sbjct: 130 CILQEK-SIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLS 188
Query: 123 K-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+VQIS G HS A+++ G +Y WG+N GQLGLG + P+ +E L +
Sbjct: 189 GVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGE--DFPSLIEALDNQKVEF 246
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV- 240
A G + +T G V ++GAG G+LGH + +E PRL+ EL G +V
Sbjct: 247 LACGGSHTALLTKDGLVFTFGAGKYGQLGHNS---------TQNELRPRLVTELAGNRVT 297
Query: 241 KIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNH 277
++A H+ A + + G+V+ FG + L G H
Sbjct: 298 QVACGSRWHTLAYVSDLGKVFSFGS-GKEGQLGNGGTH 334
Score = 226 (84.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 56/166 (33%), Positives = 89/166 (53%)
Query: 122 KKEVVQISTGYHHSSAITVD--GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
+K ++QI+ G +HS A++ GEL+ WG+N +GQLG+G+ IP P VE LSG+
Sbjct: 134 EKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTS-IPTPQLVEHLSGVPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G S+A++ G + SWG G+LG G + E P LI+ L+ K
Sbjct: 193 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGH---------TNGEDFPSLIEALDNQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
V+ A G H+A + ++G V+ FG ++ + RP L++
Sbjct: 244 VEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVT 289
Score = 208 (78.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 50/163 (30%), Positives = 82/163 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG P + A + ++ LACGG+HT LT+ G V+ G +GQ
Sbjct: 214 WGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYH-HSSAITVD-GELYMWGKNSNGQLGLGK 159
LG + L P ++ L V Q++ G H+ A D G+++ +G GQLG G
Sbjct: 274 LGHNSTQN-ELRPRLVTELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGG 332
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSW 201
++IP+P K+ + ++ ++ + + GG + +L W
Sbjct: 333 THNQLIPLPMKLPSNEEL-KFESRTSEKELIMIAGGNQSILLW 374
Score = 198 (74.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 57/174 (32%), Positives = 90/174 (51%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G L S P + L ++ G AH++ L+ +G +Y+ G ND G
Sbjct: 161 WGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ G P I L + V+ ++ G H++ +T DG ++ +G GQLG
Sbjct: 221 QLGLGHTNGEDF-PSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNST 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE-QSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 280 QNELRP--RLVTELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 42/125 (33%), Positives = 64/125 (51%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSESPVDQVSCGWKHTAA 335
H+ S GGEL+ WG N +G LG+G + + +P+ V+ S P+ Q+S G H+ A
Sbjct: 146 HSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEH-LSGVPLVQISAGKAHSMA 204
Query: 336 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+S G I +WG D G LGH N D+ P+++ +N K ++CG +
Sbjct: 205 LSMSGNIYSWG--------RNDLGQLG--LGHTNGEDF--PSLIEALDNQKVEFLACGGS 252
Query: 395 HTGAL 399
HT L
Sbjct: 253 HTALL 257
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
A +L G +Y+WG N+ G LG+G + P ++ V+ ++CG HTA ++
Sbjct: 200 AHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGGSHTALLT 258
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN-H 395
+G + T+G G +G QLGH + + + P +V + QV+CG H
Sbjct: 259 KDGLVFTFG-AGKYG-----------QLGHNSTQNELRPRLVTELAGNRVTQVACGSRWH 306
Query: 396 TGALLEYV 403
T L YV
Sbjct: 307 T---LAYV 311
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 63/230 (27%), Positives = 101/230 (43%)
Query: 181 QAALGFEQSVAVT-G-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q G S+A++ G GG++ +WG G+LG G+ F TS TP+L++ L GV
Sbjct: 139 QITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRL-----F---TSIPTPQLVEHLSGV 190
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS------------G 286
+ +AG HS + +G +Y +G + ++ N PSLI G
Sbjct: 191 PLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACG 250
Query: 287 GE----------LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG--WKHTA 334
G ++T+G+ + G LG S P R+ + + V QV+CG W A
Sbjct: 251 GSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRP-RLVTELAGNRVTQVACGSRWHTLA 309
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+S+ GK+ ++G G GQLG+G + + P + N
Sbjct: 310 YVSDLGKVFSFGSGKE------------GQLGNGGTHNQLIPLPMKLPSN 347
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 198 (74.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 49/151 (32%), Positives = 75/151 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG + + P + H ++CG T+ L+ +G VY G + GQ
Sbjct: 483 WGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQ 542
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S+ + + L ++ V+ I++G HH + +T G +Y WGK NGQLGLG
Sbjct: 543 LGCPRAKDKSVNVV-LGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVR 601
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ P+ VE L + A G + A+
Sbjct: 602 DRNSPV--LVEPLGDRLVESIACGLNLTAAI 630
Score = 174 (66.3 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 58/224 (25%), Positives = 107/224 (47%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + + +++++ G H +T G V+ G + G+LG+ NI P R+ L
Sbjct: 283 PKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDID-HPKRVESL 341
Query: 122 KKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFT 179
+ V+ ++ H + A+T GELY+WG + G +++ + K+ + L G T
Sbjct: 342 EDVAVRSVACSDHQTCAVTESGELYLWGIDG----GTIEQSGSQF-LTRKISDVLGGSLT 396
Query: 180 K-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G + VT G++ ++G+G G LGHG L S ++ P+ ++ L +
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGS-------LESVTK--PKEVESLRRM 447
Query: 239 KVKIAAAGFLHSACIDE--NGRVYIFGDRAVDKML-FQEGNHAR 279
KV + G H+A I E N R + + ++ K+ + +G+ R
Sbjct: 448 KVISVSCGPWHTAAIVETANDRKF-YNAKSCGKLFTWGDGDKGR 490
Score = 168 (64.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 62/237 (26%), Positives = 106/237 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG+ G+LGL P + E +++++AC T +TE+G +Y G++
Sbjct: 316 WGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG--- 372
Query: 103 LGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G E G +IS G V+ ++ G H++ +T G+L+ +G + G LG G
Sbjct: 373 -GTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHG- 430
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV--TGG----------GKVLSWGAGGSG 207
+ + + P +VE L + + G + A+ T GK+ +WG G G
Sbjct: 431 -SLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKG 489
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFG 263
RLGH S + P + EL + +K++ G+ + + +G VY G
Sbjct: 490 RLGHAD---------SKRKLVPTCVTELIDHDFIKVSC-GWTLTVALSISGTVYTMG 536
Score = 158 (60.7 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 48/166 (28%), Positives = 81/166 (48%)
Query: 101 GQLGISENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G + S+N +L P L S +V IS G H++ +T GE++ WG ++G+LGL
Sbjct: 269 GLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGL-- 326
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K I P +VE L + + A Q+ AVT G++ WG G G ++S
Sbjct: 327 KVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG----GTIEQSG--- 379
Query: 220 FLRSTSEYTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYIFG 263
S++ R I ++ G + + A G H+A + +G+++ +G
Sbjct: 380 -----SQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYG 420
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 56/202 (27%), Positives = 94/202 (46%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYH 133
++ACG HT +T +G ++ G FG LG ++ +P + L++ +V+ +S G
Sbjct: 399 SVACGAWHTAIVTSSGQLFTYGSGTFGVLGHG-SLESVTKPKEVESLRRMKVISVSCGPW 457
Query: 134 HSSAI--TVD----------GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
H++AI T + G+L+ WG G+LG K++P E + F K
Sbjct: 458 HTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCV-TELIDHDFIK- 515
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ +VA++ G V + G+ HGQ LG R+ + ++ L VK
Sbjct: 516 VSCGWTLTVALSISGTVYTMGSSI-----HGQ----LGCPRAKDKSVNVVLGNLTRQFVK 566
Query: 242 IAAAGFLHSACIDENGRVYIFG 263
A+G H A + G VY +G
Sbjct: 567 DIASGSHHVAVLTSFGNVYTWG 588
Score = 134 (52.2 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 41/116 (35%), Positives = 57/116 (49%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 343
S G+L+T+GS G LG GS++ + P+ V+ V VSCG HTAAI E
Sbjct: 412 SSGQLFTYGSGTFGVLGHGSLESVTKPKEVES-LRRMKVISVSCGPWHTAAIVETANDRK 470
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ S G G G+LGH + + PT V + ++VSCG+ T AL
Sbjct: 471 FYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVAL 526
Score = 133 (51.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 48/156 (30%), Positives = 72/156 (46%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG--VKVKIAAAGFLHSACI 253
GK+ +WG G GRLGH L T IK G + V ++ +G +++
Sbjct: 478 GKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGS 537
Query: 254 DENGRVYIFGDRAVDKML-FQEGNHARR--PSLISG----------GELYTWGSNENGCL 300
+G++ RA DK + GN R+ + SG G +YTWG NG L
Sbjct: 538 SIHGQLGC--PRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQL 595
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
G+G + +SP V+ P + V+ ++CG TAAI
Sbjct: 596 GLGDVRDRNSPVLVE-PLGDRLVESIACGLNLTAAI 630
Score = 91 (37.1 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 35/120 (29%), Positives = 52/120 (43%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 340
+L G +YT GS+ +G LG S V G + V ++ G H A ++ G
Sbjct: 525 ALSISGTVYTMGSSIHGQLGCPRAKD-KSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGN 583
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFNHTGAL 399
+ TWG G GQLG G+ D P +V G+ + ++CG N T A+
Sbjct: 584 VYTWGKG------------MNGQLGLGDVRDRNSPVLVEPLGDRLVE-SIACGLNLTAAI 630
Score = 84 (34.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 24/68 (35%), Positives = 31/68 (45%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILT 343
S G+L+TWG + G LG P V + +VSCGW T A+S G + T
Sbjct: 476 SCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFI-KVSCGWTLTVALSISGTVYT 534
Query: 344 WGWGGSHG 351
G HG
Sbjct: 535 MG-SSIHG 541
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 239 (89.2 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 69/228 (30%), Positives = 116/228 (50%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVV 126
++ ++++ CG E G V L D G++ + + Y++ PL+ GL +V+
Sbjct: 77 KREKIRSIVCG--------EDGAVL---LADGGKVLLMDK--YTVCRPLK--GLDNTKVI 121
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QI+ G HS A++ DG+L++WG+N++GQLGL K+ A +I P ++ L GI Q + G
Sbjct: 122 QIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQA-LIQSPQHLQSLCGIPVAQISAGG 180
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S ++ G V WG+ +G+LG G +T + P ++K L G K + G
Sbjct: 181 NHSFVLSLSGVVFGWGSNSAGQLGLGD---------TTDRFVPTIVKSLSGKKTVSISCG 231
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGS 294
H+A + + G V+ FG ++ P L++ EL WGS
Sbjct: 232 GEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVA--EL--WGS 275
Score = 188 (71.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 43/154 (27%), Positives = 77/154 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LGLG R+ P + + +++CGG HT L++ G V+ G FGQ
Sbjct: 195 WGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ 254
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG ++ P ++ L +V Q++ G HH+ + + +Y +G GQLG G++
Sbjct: 255 LG-HNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQ 313
Query: 161 AAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAV 192
+ +P+P + +C ++ G + S A+
Sbjct: 314 VKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347
Score = 166 (63.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 64/218 (29%), Positives = 101/218 (46%)
Query: 212 GQESSIL----GFLRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G++ ++L G + +YT R +K L+ KV A G HS + +G+++++G+ A
Sbjct: 87 GEDGAVLLADGGKVLLMDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENA 146
Query: 267 -------VDKMLFQEGNHARR----P--SLISGGE----------LYTWGSNENGCLGIG 303
++ L Q H + P + +GG ++ WGSN G LG+G
Sbjct: 147 HGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLG 206
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGG 362
P V+ + V +SCG +HTA +S+G + T+G GG F G
Sbjct: 207 DTTDRFVPTIVKSLSGKKTVS-ISCGGEHTATLSKGGTVFTFGSGG----F--------G 253
Query: 363 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
QLGH + D HP +V K QV+CG +HT L+
Sbjct: 254 QLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLV 291
Score = 165 (63.1 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG +G+LGL ++ + P + + ++ GG H+ L+ +G V+ G N
Sbjct: 141 VWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSA 200
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ + + P + L K+ V IS G H++ ++ G ++ +G GQLG
Sbjct: 201 GQLGLGDTTDRFV-PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLG--H 257
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQS-VAVTGGGKVLSWGAGGSGRLGHGQE 214
+ K P V L G Q G + V V ++ S+G G G+LG+G++
Sbjct: 258 NSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQ 313
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 236 (88.1 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 65/188 (34%), Positives = 90/188 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLGLG+ ES P + + CG ++ LT G V A G N F +
Sbjct: 473 WGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNK 532
Query: 103 LGIS------ENIGY-------SLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWG 148
LG+ E + + S PL + L +E + + G HS+A+T G Y +G
Sbjct: 533 LGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFG 592
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N +GQLG + +V P +V+ L GI A G +VA+ G+V SWG G GR
Sbjct: 593 SNQHGQLGTSSR--RVSRAPCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGR 650
Query: 209 LGHGQESS 216
LG E +
Sbjct: 651 LGRRDEDA 658
Score = 202 (76.2 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 71/255 (27%), Positives = 113/255 (44%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLND 99
G G G L G++E +P S F E S +K +ACG T LT+ G + G
Sbjct: 368 GTGG-GTLLPGAVELP-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGS 425
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG S +P + L E+VQ++ G H A++ DGEL+ WG+ G+LGLG
Sbjct: 426 NGCLGHGSLTDIS-QPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLG 484
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG----QE 214
+ + P +V + G ++ G + S+ +T G+VL+ G+ +LG +E
Sbjct: 485 TRESH--NCPQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEE 542
Query: 215 SSILGF-LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ + +TP L+ + G HSA + +G Y FG ++
Sbjct: 543 EPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTS 602
Query: 274 EGNHARRPSLISGGE 288
+R P + G E
Sbjct: 603 SRRVSRAPCRVQGLE 617
Score = 187 (70.9 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 69/239 (28%), Positives = 109/239 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG GSL +P + A + + +ACG +H L L+ G ++A G D G+
Sbjct: 421 FGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGR 480
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ ++ P ++ + +E ++ G S +T G + G N +LGL +
Sbjct: 481 LGLGTRESHNC-PQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLS 539
Query: 162 AKVIPIPTKV--ECLSGIFTKQAA------------LGFEQSVAVTGGGKVLSWGAGGSG 207
+ P+P + E LS FT + LG S AVT G ++G+ G
Sbjct: 540 LEEEPVPHQQVEEALS--FTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHG 597
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG SS R S P ++ LEG+K+ + A G + I G VY +G A
Sbjct: 598 QLG---TSS-----RRVSR-APCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGA 647
Score = 133 (51.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 46/160 (28%), Positives = 75/160 (46%)
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPI 167
G S+ PLR+ EVVQ++ G + +T G L +W G G G A +P
Sbjct: 326 GLSI-PLRLPMPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGG-GTLLPGAVELPQ 383
Query: 168 PTKV----ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P V E SG+ K A G + +T G ++++G+G +G LGHG + I
Sbjct: 384 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDI------ 437
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S+ P +++ L G ++ A G H + +G ++ +G
Sbjct: 438 -SQ--PTIVEALLGYEMVQVACGASHVLALSADGELFAWG 474
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 37/113 (32%), Positives = 52/113 (46%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L G + T+GS NGCLG GS+ + P V+ V QV+CG H A+S +G++
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV-QVACGASHVLALSADGEL 470
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
WG G GG+LG G + P V +A +V CG +
Sbjct: 471 FAWGRG------------DGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGID 511
Score = 123 (48.4 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
A ++ + G YT+GSN++G LG S V +P RVQG V V+CG T AI
Sbjct: 577 AHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMV-MVACGDAFTVAIG 635
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+EG++ +WG G+ G +G L +D HP V
Sbjct: 636 AEGEVYSWG-KGARGRLGRRDEDAG--LPRPVQLDETHPYTV 674
Score = 68 (29.0 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 35/130 (26%), Positives = 55/130 (42%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSP---ERVQG-----PFSESPVDQ-----VSCG 329
L S G + GSN LG+ + + P ++V+ P +P+D+ V G
Sbjct: 516 LTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLG 575
Query: 330 WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
H+AA++ G+ TF + H GQLG + P V E +K + V
Sbjct: 576 TAHSAAVTAS--------GACYTFGSNQH---GQLGTSSRRVSRAPCRVQGLEGIKMVMV 624
Query: 390 SCGFNHTGAL 399
+CG T A+
Sbjct: 625 ACGDAFTVAI 634
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 234 (87.4 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 99/343 (28%), Positives = 151/343 (44%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGIS----ENIGYSLE-PLRISGLKKEVVQIS 129
+LA G AHT+ LT GCVY+ G FG+LG E + +E P + G + +V ++
Sbjct: 20 SLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVA 79
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE---CLSGIFTKQAALG 185
G +HS A++ DG ++ WG N GQLG G+ + I E S + +G
Sbjct: 80 AGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVG 139
Query: 186 FEQSVAVTGGGKVLSWG---AGGSGRLGH--GQESSILGFLRSTSEYTPRLIKELEGVKV 240
+ V G ++S GG G+ Q+S L TS P I + G V
Sbjct: 140 SDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTV 199
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL 300
L AC DE+ V + G + K +++ S+ LY+WG+N +G L
Sbjct: 200 -------LKVACGDEHV-VALVGPGDIHK------DNSYDVSV-----LYSWGNNHHGQL 240
Query: 301 GIGSIDVLHSPERVQGPFSESP---VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
G+G + P+ V+ F++ V ++CG HTA ++ K G TF G
Sbjct: 241 GLGDGESRARPQTVE-TFNQKSGLTVYDIACGAHHTALLTYRKETPKG-PSICWTF---G 295
Query: 358 HSSGGQLGH-GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLGH N + + + E+ + V CG HT +
Sbjct: 296 FGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVV 338
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 71/238 (29%), Positives = 105/238 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKA--LACGGAHTLFLT---ET----GCV 92
WGN +G+LGLG ESR RP F +K L +ACG HT LT ET
Sbjct: 232 WGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSIC 291
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKN 150
+ G + GQLG N SL P +S L + +V + G H+S ++ +G ++ WG
Sbjct: 292 WTFGFGENGQLGHRSNKSSSL-PEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGM- 349
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG---FEQSVAVTGGGKVLSWGAGGSG 207
+ GLG + T+VE ++ + G F V V+ G G
Sbjct: 350 ---ERGLG--LCPDVNF-TEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVDGGY 403
Query: 208 RL---GHGQESSILGFLRSTSEYTPRLI---KELEGVKVKIAAAGFLHSACIDENGRV 259
+L G G+ + +LG + Y P L+ EL+ K ++ G SA +E R+
Sbjct: 404 KLWSWGRGR-NGVLGTGNVSDCYVPTLVFWPNELKPEKEEVPDDG--KSASTEEIKRL 458
Score = 156 (60.0 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 46/156 (29%), Positives = 78/156 (50%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI----PTKVECLSG 176
L ++++ ++ G H+ A+T DG +Y WG+ G+LG GK++ +++P+ P + E
Sbjct: 14 LSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEG-DR 72
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG------FLRSTSEYTPR 230
I A G S+AV+ G V WG G+LG E+S+ F R TS +
Sbjct: 73 IRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLN 132
Query: 231 LIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGD 264
G +K+ AG + S ID G ++++G+
Sbjct: 133 DSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGN 168
Score = 104 (41.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 29/85 (34%), Positives = 42/85 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC-----SAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG G +GRLG G PV+ + ++ + +A G H+L +++ G V+ G
Sbjct: 40 WGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGY 99
Query: 98 NDFGQLGIS-ENIGYSLEPLRISGL 121
N +GQLG EN SL P I L
Sbjct: 100 NIYGQLGFDGEN---SLAPCLIKNL 121
Score = 95 (38.5 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 36/151 (23%), Positives = 59/151 (39%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
V C ++H + + G H + +Y+ G N GQLG+ + + P +
Sbjct: 202 VACG--DEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRA-RPQTVETFN 258
Query: 123 KE----VVQISTGYHHSSAITV-----DGELYMW--GKNSNGQLGLGKKAAKVIPIPTKV 171
++ V I+ G HH++ +T G W G NGQLG + +P P
Sbjct: 259 QKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVS- 317
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ + G + V+ G V SWG
Sbjct: 318 DLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Score = 94 (38.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 35/114 (30%), Positives = 49/114 (42%)
Query: 282 SLISG-GELYTWGSNENG---CLGIGSIDVLHS----PERVQGPFSE--SPVDQVSCGWK 331
S++S G +++WG E G C + +V P ++ G S PV QVSCG
Sbjct: 336 SVVSSEGYVWSWGM-ERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPV-QVSCGAA 393
Query: 332 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
HT + +G W WG G LG GN D PT+V + +K
Sbjct: 394 HTVLVVDGGYKLWSWG----------RGRNGVLGTGNVSDCYVPTLVFWPNELK 437
Score = 94 (38.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 35/109 (32%), Positives = 47/109 (43%)
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
+T+G ENG LG S PE V + + V CG HT+ +S EG + W WG
Sbjct: 292 WTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYV--WSWGM 349
Query: 349 SHGT-FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
G D + + + G + I F + V QVSCG HT
Sbjct: 350 ERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPV---QVSCGAAHT 395
Score = 68 (29.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 283 LISGG-ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
++ GG +L++WG NG LG G++ + P V P P
Sbjct: 398 VVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLVFWPNELKP 438
Score = 41 (19.5 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
WG YG+LG S ++ + FE+ +
Sbjct: 97 WGYNIYGQLGFDGENSLAPCLIKNLFERET 126
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 377 IVNF-GENVKALQVSCGFNHTGALL 400
I++F G V L+V+CG H AL+
Sbjct: 191 ILDFHGRTV--LKVACGDEHVVALV 213
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 225 (84.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 69/221 (31%), Positives = 103/221 (46%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+Q LG E ++ + G+V SWG G G+LGHG + E PRL++ L+G+
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA---------ELEPRLLEALQGLV 211
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM------LFQEGNHARRPSLIS-GGELYTW 292
+ AAG HS C+ E G +YI+G ++ L ++G R L G ++
Sbjct: 212 MAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREELNEDGSQVKRT 271
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
G E+G I V P + P V + SCG +HTA ++ G++ TWGWG
Sbjct: 272 GGAEDGAPA-PFIAVQPFPALLDLPMGSDAV-KASCGSRHTAVVTRTGELYTWGWG---- 325
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+ + GH L V+Y V+ VKA V+CG
Sbjct: 326 KYGQLGHEDTTSLDRPRRVEYF----VDKQLQVKA--VTCG 360
Score = 131 (51.2 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 182 WGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQIS-TG 131
L + + N+ E + L ++ Q+ TG
Sbjct: 242 LALPTRNLAEDGETVAREELNEDGSQVKRTG 272
Score = 123 (48.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGY 132
+ L G H L L G V++ G GQLG + LEP + L+ V+ +++ G
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 133 HHSSAITVDGELYMWGKNSNGQLGL 157
HS ++ G++Y+WG N +GQL L
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLAL 244
Score = 118 (46.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+ G H+ + G+++ WG +GQLG G A++ P +E L G+ + A G
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEP--RLLEALQGLVMAEVAAGG 219
Query: 187 EQSVAVTGGGKVLSWGAGGSGRL 209
SV V+ G + WG SG+L
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQL 242
Score = 81 (33.6 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ V+ S G H++ +T GELY WG GQLG
Sbjct: 299 DAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 331
Score = 78 (32.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
V P P ++ G +A+ G + VT G++ +WG G G+LGH +S+
Sbjct: 285 VQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSL 338
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +++ A++ SCG HT +
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVV 313
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 187 (70.9 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 47/125 (37%), Positives = 79/125 (63%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 49 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 106
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK------NSNGQL 155
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++ +L
Sbjct: 107 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRHCLFHTSQRL 165
Query: 156 GLGKK 160
G GK+
Sbjct: 166 GWGKE 170
Score = 172 (65.6 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 66/227 (29%), Positives = 97/227 (42%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 34 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 92
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 93 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 150
Query: 201 WGA------GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
WG+ S RLG G+E + + S R+ K+ GV G L
Sbjct: 151 WGSFRHCLFHTSQRLGWGKEV----WRQGLSHL--RVSKDNNGV------IGLLEPM--- 195
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
+ V + V + GN L + G+LYT G E G LG
Sbjct: 196 KKSMVPVQVQLDVPVVKVASGND-HLVMLTADGDLYTLGCGEQGQLG 241
Score = 65 (27.9 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
K++NG +GL + K + +P +V+ + + A G + V +T G + + G G G+
Sbjct: 183 KDNNGVIGLLEPMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQ 239
Query: 209 LGHGQE 214
LG E
Sbjct: 240 LGRVPE 245
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 173 (66.0 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 59/200 (29%), Positives = 99/200 (49%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKE 124
+K + ++CG AH+L LT++ V+ G N +GQ G + E+ YS L +++
Sbjct: 163 QKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSR 222
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAA 183
VVQ+ G HS T G ++ G ++GQ GLG + +PTK+ ++G+ Q +
Sbjct: 223 VVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHY--NITSVPTKLGGDIAGVNIVQVS 280
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
+ +AV+ G + WG S L Q +S+ +T PR + G K+K A
Sbjct: 281 SYGDCCLAVSDEGDLFGWG--NSEYL---QLASVT---ETTQVNVPRHLPFKIG-KIKEA 331
Query: 244 AAGFLHSACIDENGRVYIFG 263
A G + + E G V+++G
Sbjct: 332 ACGGTGNIVLTEEGAVFVWG 351
Score = 149 (57.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 56/230 (24%), Positives = 101/230 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK-------ALACGGAHTLFLTETGCVYATG 96
GN YG+ G +E + + H L + CG H+LF T+ G V+A G
Sbjct: 190 GNNSYGQCGRKVVEDE---IYSESHLIHQLNDFDSRVVQVVCGQDHSLFRTKKGAVFACG 246
Query: 97 LNDFGQLGISE-NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
GQ G+ NI + P ++ G +VQ+S+ A++ +G+L+ WG +
Sbjct: 247 WGADGQTGLGHYNI--TSVPTKLGGDIAGVNIVQVSSYGDCCLAVSDEGDLFGWGNSEYL 304
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QL + +V +P + G K+AA G ++ +T G V WG G G+ +
Sbjct: 305 QLASVTETTQV-NVPRHLPFKIGKI-KEAACGGTGNIVLTEEGAVFVWGYGILGKGPNLT 362
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E+++ + + ++ +V+ G H A + G ++++G
Sbjct: 363 ETAVPEMIPPSLFGWSDFSSDVRVARVR---CGLSHFAALTNRGELFVWG 409
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 44/135 (32%), Positives = 64/135 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCS--AFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +Y L L S+ + V F+ +K ACGG + LTE G V+ G +
Sbjct: 298 WGNSEY--LQLASVTETTQVNVPRHLPFKIGKIKEAACGGTGNIVLTEEGAVFVWG---Y 352
Query: 101 GQLGISENIGYSLEPLRI-------SGLKKEV--VQISTGYHHSSAITVDGELYMWGKNS 151
G LG N+ + P I S +V ++ G H +A+T GEL++WGKN
Sbjct: 353 GILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALTNRGELFVWGKNL 412
Query: 152 NGQLGLGKKAAKVIP 166
G LG+G+ + P
Sbjct: 413 RGCLGIGRMEDQYFP 427
Score = 131 (51.2 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 59/218 (27%), Positives = 95/218 (43%)
Query: 29 RWISSTLQRRFAA-LWGNGDYGRLGLGSL---ESRW---RPVVCSAFE---KHSLKALAC 78
+++ ++R+ +WG G LG+ S ++ W R + + + + + + AC
Sbjct: 46 QYVGKAVKRKDRVFVWGFSYSGALGVPSFVKPDAGWKKPRRIQATPYRLETEEKITSAAC 105
Query: 79 GGAHTLF---LTETGCVYATGLNDFGQLGISENI-----GYS--LEPLRIS-GLKK---- 123
G TL T+ V+ GLN QLG +I GY LEP I L+K
Sbjct: 106 GYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPLEKPQKT 165
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--Q 181
V+Q+S G HS +T ++ G NS GQ G ++ + L+ ++ Q
Sbjct: 166 RVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQ 225
Query: 182 AALGFEQSVAVTGGGKVLS--WGAGGSGRLGHGQESSI 217
G + S+ T G V + WGA G LGH +S+
Sbjct: 226 VVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSV 263
Score = 100 (40.3 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+L + GEL+ WG N GCLGIG ++ + P RV P V V+CG H ++
Sbjct: 398 ALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTIP---GEVVDVACGVDHMVSM 449
Score = 84 (34.6 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 287 GELYTWGSNENGCLG-IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 344
G+L+ WG++E L + ++ P + PF + + +CG ++E G + W
Sbjct: 293 GDLFGWGNSEYLQLASVTETTQVNVPRHL--PFKIGKIKEAACGGTGNIVLTEEGAVFVW 350
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV---NFGENVKALQVSCGFNHTGAL 399
G+G G L + I P++ +F +V+ +V CG +H AL
Sbjct: 351 GYGIL---------GKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAAL 399
Score = 65 (27.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 34/128 (26%), Positives = 52/128 (40%)
Query: 283 LISGGELYTWGSNENGCLGIG-SIDVLHSPERVQ------GPFSESP-VDQVSCGWKHTA 334
L G ++ WG G LG G ++ PE + FS V +V CG H A
Sbjct: 341 LTEEGAVFVWGY---GILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFA 397
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A++ G++ WG + G LG G D P V V + V+CG
Sbjct: 398 ALTNRGELFVWG------------KNLRGCLGIGRMEDQYFPWRVTIPGEV--VDVACGV 443
Query: 394 NHTGALLE 401
+H ++++
Sbjct: 444 DHMVSMVK 451
Score = 63 (27.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 345
G ++ G +G G+G ++ P ++ G + + QVS A+S EG + +G
Sbjct: 240 GAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIVQVSSYGDCCLAVSDEGDL--FG 297
Query: 346 WGGS 349
WG S
Sbjct: 298 WGNS 301
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 217 (81.4 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 89/319 (27%), Positives = 136/319 (42%)
Query: 90 GCVYATGLNDFGQL---GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
G + G FGQ G + S EPL+ G +V ++S + +++ +T E
Sbjct: 7 GSWFGFGFCGFGQAPGSGRGRQV-LSPEPLQTPGSGADVRRVSASWSYTALVT--RERPP 63
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
G G KA + P L+ + ++ LG E ++ + G+V SWG G
Sbjct: 64 PALLRPGPRVPGAKAPQPALRPPAPRALAPELRARRLELGAEHALLLDEAGQVFSWGQGR 123
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-- 263
G+LGHG L + E PRL++ L+G+ V AAG HS C+ E G +YI+G
Sbjct: 124 HGQLGHGS-------LEAEPE--PRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWN 174
Query: 264 ---DRAVDKMLFQEGNHA--RRPSLIS--GGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
A+ E R S ++ G E+ E+G I + P +
Sbjct: 175 ESGQLALPSRSLAEDTKTIPREASGLNEDGFEVRRTAKGEDGAPA-PFIAIQPFPALLDL 233
Query: 317 PFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
P V + SCG +HTA ++ G++ TWGWG GQLGH + P
Sbjct: 234 PLGADVV-KASCGSRHTAVVTGTGELYTWGWG------------KYGQLGHKDTTSLDRP 280
Query: 376 TIVNF--GENVKALQVSCG 392
V + + ++ VSCG
Sbjct: 281 CRVEYFVDKQLQVRAVSCG 299
Score = 185 (70.2 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 51/175 (29%), Positives = 85/175 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG GSLE+ P + A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 119 WGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQ 178
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P R L ++ I +S + DG + + + G+ G
Sbjct: 179 LAL---------PSR--SLAEDTKTIP---REASGLNEDG--FEVRRTAKGEDGAPAPFI 222
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P P ++ G +A+ G + VTG G++ +WG G G+LGH +S+
Sbjct: 223 AIQPFPALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSL 277
Score = 129 (50.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGY 132
+ L G H L L E G V++ G GQLG ++ EP + L+ V +++ G
Sbjct: 98 RRLELGAEHALLLDEAGQVFSWGQGRHGQLGHG-SLEAEPEPRLLEALQGLPVAEVAAGG 156
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKK--AAKVIPIPTKVECLS--GIFTKQAALG 185
HS ++ G++Y+WG N +GQL L + A IP + L+ G ++ A G
Sbjct: 157 WHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGLNEDGFEVRRTAKG 213
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +++ ++ SCG HT +
Sbjct: 228 PALLDLPLGADVVKASCGSRHTAVV 252
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 224 (83.9 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 74/233 (31%), Positives = 106/233 (45%)
Query: 43 WGN--GDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG + G LG + + + P + +K +K L CG H L L + G V + G
Sbjct: 255 WGTFRSNDGILGFDAKTKVQTTPKLLPDLKK--IKHLVCGDNHVLALNDKGAVLSWGSGQ 312
Query: 100 FGQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
QLG I N L+P R GL K +V I G HS A+ G+++ WG NS G+ G
Sbjct: 313 QNQLGRRIIERNKLNGLQP-REFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETG 371
Query: 157 LGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ + A I PT V+ LS Q G S+A T G+ L WG + G
Sbjct: 372 IRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKI 431
Query: 214 ESSILGFLRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ + PR++ E + G+K K AAG HS ID +GR + +G
Sbjct: 432 DTLPDDAVIKDERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWG 484
Score = 204 (76.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 60/195 (30%), Positives = 90/195 (46%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G +LG +E ++ + F + + G H+ + ++G V+A GLN F
Sbjct: 308 WGSGQQNQLGRRIIERNKLNGLQPREFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSF 367
Query: 101 GQLGISENIGYS----LEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+ GI EN G S + P + L KK V QI G HHS A T DGE +WG+ Q
Sbjct: 368 GETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQT 427
Query: 156 GLG-------------KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
GL + +++ PT V GI K A G + S+A+ G+ SWG
Sbjct: 428 GLKIDTLPDDAVIKDERDRPRILIEPTAVP---GIKAKAVAAGSDHSIAIDTSGRPWSWG 484
Query: 203 AGGSGRLGHGQESSI 217
+ + G G + +
Sbjct: 485 FSATYQTGQGTQDDV 499
Score = 135 (52.6 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 45/142 (31%), Positives = 72/142 (50%)
Query: 125 VVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+V+++ G S A+T +G++Y WG ++++G LG K KV P + L I K
Sbjct: 233 IVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKT-KVQTTPKLLPDLKKI--KHL 289
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVK 241
G +A+ G VLSWG+G +LG E + L L+ PR +G+ V
Sbjct: 290 VCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQ------PREFGLPKGI-VH 342
Query: 242 IAAAGFLHSACIDENGRVYIFG 263
I A F HS + ++G+V+ +G
Sbjct: 343 IGAGAF-HSFAVHQSGKVFAWG 363
Score = 82 (33.9 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 27/89 (30%), Positives = 40/89 (44%)
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKE 234
G + A G S A+T G+V WG S ILGF T + TP+L+ +
Sbjct: 230 GTVIVEVAAGDSSSFALTDEGQVYGWGTFRSN-------DGILGFDAKTKVQTTPKLLPD 282
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L+ K+K G H +++ G V +G
Sbjct: 283 LK--KIKHLVCGDNHVLALNDKGAVLSWG 309
Score = 80 (33.2 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 92 VYATGLNDFGQLG--ISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGELYM 146
VY G G+LG + +N+ P L + VVQ++ G H A+T D ++
Sbjct: 112 VYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLT 171
Query: 147 WGKNSNGQLG 156
WG N G LG
Sbjct: 172 WGVNDQGALG 181
Score = 74 (31.1 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 34/122 (27%), Positives = 49/122 (40%)
Query: 287 GELYTWGSNENGCLGI----GSIDVLHSPERVQGPFSESPVDQVSCGWKH--TAAISEGK 340
G+++ WG N G GI G + V S+ V Q+ CG H AA +G+
Sbjct: 357 GKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQI-CGGAHHSIAATQDGE 415
Query: 341 ILTWGWGGSHGT-FSEDGHSSGGQLGHGNDVD--YIHPTIVNFGENVKALQVSCGFNHTG 397
L WG + T D + D I PT V +KA V+ G +H+
Sbjct: 416 CLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAV---PGIKAKAVAAGSDHSI 472
Query: 398 AL 399
A+
Sbjct: 473 AI 474
Score = 74 (31.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 30/125 (24%), Positives = 54/125 (43%)
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGWKHT 333
NH +L G + +WGS + LG I+ L+ + + + V + G H+
Sbjct: 294 NHVL--ALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGIV-HIGAGAFHS 350
Query: 334 AAISE-GKILTWGWGGSHGTFSEDG-HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
A+ + GK+ WG +F E G + G ++ +HPT+V+ Q+
Sbjct: 351 FAVHQSGKVFAWGLN----SFGETGIRENAGD----SEAAIVHPTVVDSLSKKNVTQICG 402
Query: 392 GFNHT 396
G +H+
Sbjct: 403 GAHHS 407
Score = 63 (27.2 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 22/66 (33%), Positives = 30/66 (45%)
Query: 44 GNGDYGRLGLG---SLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLN 98
G G G LGLG ++ RP + + + +A GG H + LT V G+N
Sbjct: 116 GEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLTWGVN 175
Query: 99 DFGQLG 104
D G LG
Sbjct: 176 DQGALG 181
Score = 42 (19.8 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 339 GKILTW-GWGGSHGTFSE 355
GK L W G GG F+E
Sbjct: 512 GKSLNWAGGGGQFSVFTE 529
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 230 (86.0 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 98/380 (25%), Positives = 164/380 (43%)
Query: 44 GNGDYG-RLGLGSLESRWRPVVC-SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G G G RL +++ R + + + ++ ++ CG HT+FLT+ G +++ G N G
Sbjct: 12 GEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDG 71
Query: 102 QLGI-SENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S G +S+ P+ + K ++QIS G H+ ++T DG ++ WG N +GQLG+
Sbjct: 72 QLGRGSRTEGSFSIYPVSWTSSAK-IIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMES 130
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K P +V+ ++ I Q A G +A+ GG+V WG GR H
Sbjct: 131 KFTWQ-GTPRRVQEINDIV--QVASGSNHCIALDEGGRVFVWGEQADGRCIH-------- 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-----AVDKMLFQE 274
P +++L GV + AG H + +G V+ +G +D + Q
Sbjct: 180 --------RPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQT 231
Query: 275 G-NHARRPS----------------LISGGELYTWGSNENGCLGIGS-IDVLHSPERVQG 316
H + L G +++GS+ G G G ++ +P V
Sbjct: 232 SVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSD 291
Query: 317 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
S V +++ G HT AI +G +G +S GQLG+G + P
Sbjct: 292 LIG-SHVTRIAAGACHTIAICKGAPYPFGL------------NSSGQLGNGKIMTQSTPR 338
Query: 377 IVNFGENVKALQVSCGFNHT 396
+ ++V V G++ T
Sbjct: 339 KTDELDHVTG--VFAGYHQT 356
Score = 167 (63.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 49/179 (27%), Positives = 91/179 (50%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R FA WG+ ++G+LG+ S + W+ E + + +A G H + L E G V+ G
Sbjct: 114 RVFA--WGSNEHGQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWG 170
Query: 97 LNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+ I + EP+ ++SG+ +V++ G H A++ G ++ WG+N++G+L
Sbjct: 171 EQADGRC-I-----HRPEPVEQLSGVP--IVRVLAGARHCLALSASGAVFTWGQNNSGEL 222
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + V + G+ +AA G +V +T G+ S+G+ G+ G G++
Sbjct: 223 GIDDLRPQTSV--QHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKK 279
Score = 166 (63.5 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 46/158 (29%), Positives = 73/158 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G LG+ L + + + ACG HT+ LT G ++ G + GQ
Sbjct: 214 WGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQ 273
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G + + P +S L V +I+ G H+ AI G Y +G NS+GQLG GK
Sbjct: 274 CGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIM 332
Query: 162 AKVIPIPT-KVECLSGIFTKQAALGFEQSVAVTGGGKV 198
+ P T +++ ++G+F G+ Q+ V G +
Sbjct: 333 TQSTPRKTDELDHVTGVFA-----GYHQTFFVRSSGTI 365
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 68/272 (25%), Positives = 112/272 (41%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVTGGGKV 198
EL G GQLG+ + + I +P ++ + G G + +V +T GK+
Sbjct: 4 ELLGCGHTGEGQLGV-RLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKM 62
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
S G+ G+LG G + G S S Y P + K+ +AG H+ + ++GR
Sbjct: 63 WSVGSNMDGQLGRGSRTE--G---SFSIY-P--VSWTSSAKIIQISAGRSHTVSVTDDGR 114
Query: 259 VYIFGDR-----AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI---GSIDV--- 307
V+ +G ++ +G RR I+ ++ S N C+ + G + V
Sbjct: 115 VFAWGSNEHGQLGMESKFTWQGT-PRRVQEIN--DIVQVASGSNHCIALDEGGRVFVWGE 171
Query: 308 ------LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
+H PE V+ S P+ +V G +H A+S G + TWG S G D
Sbjct: 172 QADGRCIHRPEPVE-QLSGVPIVRVLAGARHCLALSASGAVFTWGQNNS-GELGIDDLRP 229
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+ H + +D + G+N L CG
Sbjct: 230 QTSVQHVHQMDGLGVVEAACGDNHTVLLTHCG 261
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 230 (86.0 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 98/380 (25%), Positives = 164/380 (43%)
Query: 44 GNGDYG-RLGLGSLESRWRPVVC-SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G G G RL +++ R + + + ++ ++ CG HT+FLT+ G +++ G N G
Sbjct: 12 GEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDG 71
Query: 102 QLGI-SENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S G +S+ P+ + K ++QIS G H+ ++T DG ++ WG N +GQLG+
Sbjct: 72 QLGRGSRTEGSFSIYPVSWTSSAK-IIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMES 130
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K P +V+ ++ I Q A G +A+ GG+V WG GR H
Sbjct: 131 KFTWQ-GTPRRVQEINDIV--QVASGSNHCIALDEGGRVFVWGEQADGRCIH-------- 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-----AVDKMLFQE 274
P +++L GV + AG H + +G V+ +G +D + Q
Sbjct: 180 --------RPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQT 231
Query: 275 G-NHARRPS----------------LISGGELYTWGSNENGCLGIGS-IDVLHSPERVQG 316
H + L G +++GS+ G G G ++ +P V
Sbjct: 232 SVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSD 291
Query: 317 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
S V +++ G HT AI +G +G +S GQLG+G + P
Sbjct: 292 LIG-SHVTRIAAGACHTIAICKGAPYPFGL------------NSSGQLGNGKIMTQSTPR 338
Query: 377 IVNFGENVKALQVSCGFNHT 396
+ ++V V G++ T
Sbjct: 339 KTDELDHVTG--VFAGYHQT 356
Score = 167 (63.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 49/179 (27%), Positives = 91/179 (50%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R FA WG+ ++G+LG+ S + W+ E + + +A G H + L E G V+ G
Sbjct: 114 RVFA--WGSNEHGQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWG 170
Query: 97 LNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+ I + EP+ ++SG+ +V++ G H A++ G ++ WG+N++G+L
Sbjct: 171 EQADGRC-I-----HRPEPVEQLSGVP--IVRVLAGARHCLALSASGAVFTWGQNNSGEL 222
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + V + G+ +AA G +V +T G+ S+G+ G+ G G++
Sbjct: 223 GIDDLRPQTSV--QHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKK 279
Score = 166 (63.5 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 46/158 (29%), Positives = 73/158 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G LG+ L + + + ACG HT+ LT G ++ G + GQ
Sbjct: 214 WGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQ 273
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G + + P +S L V +I+ G H+ AI G Y +G NS+GQLG GK
Sbjct: 274 CGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIM 332
Query: 162 AKVIPIPT-KVECLSGIFTKQAALGFEQSVAVTGGGKV 198
+ P T +++ ++G+F G+ Q+ V G +
Sbjct: 333 TQSTPRKTDELDHVTGVFA-----GYHQTFFVRSSGTI 365
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 68/272 (25%), Positives = 112/272 (41%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVTGGGKV 198
EL G GQLG+ + + I +P ++ + G G + +V +T GK+
Sbjct: 4 ELLGCGHTGEGQLGV-RLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKM 62
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
S G+ G+LG G + G S S Y P + K+ +AG H+ + ++GR
Sbjct: 63 WSVGSNMDGQLGRGSRTE--G---SFSIY-P--VSWTSSAKIIQISAGRSHTVSVTDDGR 114
Query: 259 VYIFGDR-----AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI---GSIDV--- 307
V+ +G ++ +G RR I+ ++ S N C+ + G + V
Sbjct: 115 VFAWGSNEHGQLGMESKFTWQGT-PRRVQEIN--DIVQVASGSNHCIALDEGGRVFVWGE 171
Query: 308 ------LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
+H PE V+ S P+ +V G +H A+S G + TWG S G D
Sbjct: 172 QADGRCIHRPEPVE-QLSGVPIVRVLAGARHCLALSASGAVFTWGQNNS-GELGIDDLRP 229
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+ H + +D + G+N L CG
Sbjct: 230 QTSVQHVHQMDGLGVVEAACGDNHTVLLTHCG 261
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 226 (84.6 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 67/198 (33%), Positives = 92/198 (46%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST + FA WG GD GRLGLG+ ES P + + CG ++ LT G
Sbjct: 459 STERELFA--WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQA 516
Query: 93 YATGLNDFGQLGISE-NIGYSLEP------------LRISGLKKE-VVQISTGYHHSSAI 138
A G N F +LG+ ++G P L + L +E ++ I G HS+A+
Sbjct: 517 LACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAV 576
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
T G+ Y +G N +GQLG + P KV+ L GI A G +VA+ +V
Sbjct: 577 TASGDCYTFGSNQHGQLGTNTRRGS--RAPCKVQGLEGIKMAMVACGDAFTVAIGAESEV 634
Query: 199 LSWGAGGSGRLGHGQESS 216
SWG G GRLG E +
Sbjct: 635 YSWGKGARGRLGRRDEDA 652
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 69/254 (27%), Positives = 108/254 (42%)
Query: 27 CKRWISSTL-QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C + ++ L R +G+G G LG GSL +P + A + + +ACG +H L
Sbjct: 398 CGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLA 457
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL 144
L+ ++A G D G+LG+ +S P ++ +E ++ G S +TV G+
Sbjct: 458 LSTERELFAWGRGDSGRLGLGTRESHSC-PQQVPMPPGQEAQRVVCGIDSSMILTVPGQA 516
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAAL----------GFEQSVAV 192
G N +LGL + P+P + E LS A L G S AV
Sbjct: 517 LACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAV 576
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G ++G+ G+LG R S P ++ LEG+K+ + A G +
Sbjct: 577 TASGDCYTFGSNQHGQLGTNT--------RRGSR-APCKVQGLEGIKMAMVACGDAFTVA 627
Query: 253 IDENGRVYIFGDRA 266
I VY +G A
Sbjct: 628 IGAESEVYSWGKGA 641
Score = 179 (68.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 67/250 (26%), Positives = 109/250 (43%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 366 GSLLPGAVEQP-QPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLG 424
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
S +P + L E+VQ++ G H A++ + EL+ WG+ +G+LGLG + +
Sbjct: 425 HGSLTDIS-QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESH 483
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--H---GQESSIL 218
P +V G ++ G + S+ +T G+ L+ G+ +LG H G+E
Sbjct: 484 --SCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPH 541
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +T L+ + G HSA + +G Y FG ++ +
Sbjct: 542 QQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGS 601
Query: 279 RRPSLISGGE 288
R P + G E
Sbjct: 602 RAPCKVQGLE 611
Score = 125 (49.1 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI--PIPTKV- 171
PLR+ L EVVQ++ G + +T G L +W G G G + P P +
Sbjct: 324 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG-GSLLPGAVEQPQPQFIS 382
Query: 172 ---ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
E SG+ K A G + +T G ++++G+G +G LGHG + I S+
Sbjct: 383 RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDI-------SQ-- 433
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P +++ L G ++ A G H + ++ +G
Sbjct: 434 PTIVEALLGYEMVQVACGASHVLALSTERELFAWG 468
Score = 120 (47.3 bits), Expect = 0.00054, P = 0.00054
Identities = 31/85 (36%), Positives = 43/85 (50%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L G + T+GS NGCLG GS+ + P V+ V QV+CG H A+S E ++
Sbjct: 406 LTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV-QVACGASHVLALSTEREL 464
Query: 342 LTWGWG--GSHGTFSEDGHSSGGQL 364
WG G G G + + HS Q+
Sbjct: 465 FAWGRGDSGRLGLGTRESHSCPQQV 489
Score = 108 (43.1 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
A ++ + G+ YT+GSN++G LG + +P +VQG + V+CG T AI
Sbjct: 571 AHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTVAIG 629
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+E ++ +WG G+ G +G L +D HP V
Sbjct: 630 AESEVYSWG-KGARGRLGRRDEDAG--LPRPVQLDETHPYTV 668
Score = 59 (25.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 23/83 (27%), Positives = 33/83 (39%)
Query: 317 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
P + P+ + G H+AA++ G TF + H GQLG P
Sbjct: 557 PLDQEPLLSIDLGTAHSAAVTAS--------GDCYTFGSNQH---GQLGTNTRRGSRAPC 605
Query: 377 IVNFGENVKALQVSCGFNHTGAL 399
V E +K V+CG T A+
Sbjct: 606 KVQGLEGIKMAMVACGDAFTVAI 628
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 219 (82.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 70/223 (31%), Positives = 106/223 (47%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+Q LG E ++ + G+V SWG G G+LGHG + E PRL++ L+G+
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA---------ELEPRLLEALQGLV 211
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM------LFQEGNH-ARRPSLIS--GGELY 290
+ AAG HS C+ E G +YI+G ++ L ++G AR + ++ G ++
Sbjct: 212 MAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVK 271
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
G E+G I V P + P V + SCG +HTA ++ G++ TWGWG
Sbjct: 272 RTGGAEDGAPA-PFIAVQPFPALLDLPMGSDAV-KASCGSRHTAVVTRTGELYTWGWG-K 328
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+G GH L V+Y V+ VKA V+CG
Sbjct: 329 YGQL---GHEDTTSLDRPRRVEYF----VDKQLQVKA--VTCG 362
Score = 165 (63.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 182 WGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P R E V ++ + DG + + G
Sbjct: 242 LAL---------PTRNLAEDGETVA-----REATELNEDGSQVK--RTGGAEDGAPAPFI 285
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
V P P ++ G +A+ G + VT G++ +WG G G+LGH +S+
Sbjct: 286 AVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSL 340
Score = 123 (48.4 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGY 132
+ L G H L L G V++ G GQLG + LEP + L+ V+ +++ G
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 133 HHSSAITVDGELYMWGKNSNGQLGL 157
HS ++ G++Y+WG N +GQL L
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLAL 244
Score = 118 (46.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+ G H+ + G+++ WG +GQLG G A++ P +E L G+ + A G
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEP--RLLEALQGLVMAEVAAGG 219
Query: 187 EQSVAVTGGGKVLSWGAGGSGRL 209
SV V+ G + WG SG+L
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQL 242
Score = 41 (19.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +++ A++ SCG HT +
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVV 315
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 198 (74.8 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 82/295 (27%), Positives = 133/295 (45%)
Query: 57 ESRWRPVVCSAFEKHSLKALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
++ W P + + G AH+L +T G +++ G ND GQLG + LE
Sbjct: 107 QNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDT--KRLE 164
Query: 115 -PLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P I GL +EV V + G +H+ A+T +G +Y +G+N GQLG G + V+ P ++
Sbjct: 165 APKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLS-PATIQ 223
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
+G + A G E S+ V G + S+G G+LGH + + + E+ LI
Sbjct: 224 -YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRI-EFDCELI 281
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+V I F+ ++G+V + V + + NH L S +++W
Sbjct: 282 PR----RVAI----FIEKT---KDGQVLPVPN-VVARDVACGANHTL--VLDSQKRVFSW 327
Query: 293 GSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
G G LG P V+ F Q+ CG++ + A+SE G + WG
Sbjct: 328 GFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWG 382
Score = 185 (70.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 58/200 (29%), Positives = 89/200 (44%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKL-GICKRW-ISSTLQRRFAALWGNGDYGRLGLGSLESR 59
LG++L +Y D+++ + G C + T + + + WG D G+LG G +
Sbjct: 105 LGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWS-WGRNDKGQLGHGDTKRL 163
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + A ACG HTL LTE G VY G N GQLG L P I
Sbjct: 164 EAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ 223
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
+ +V+++ G S + G LY +G GQLG K I ++E +
Sbjct: 224 YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEFDCELIP 282
Query: 180 KQAALGFEQSVAVTGGGKVL 199
++ A+ E+ T G+VL
Sbjct: 283 RRVAIFIEK----TKDGQVL 298
Score = 138 (53.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 49/181 (27%), Positives = 78/181 (43%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL-RISGLK-KEVVQISTGYH 133
+ACG HTL L V++ G +G+LG +E + L ++ + QI GY
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQ 367
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
S A++ G L+ WG + + + P V+ L G + A G + S+ V
Sbjct: 368 CSFALSEMGGLFFWGVTNTSR--------ESTMYPKAVQDLCGWKIRSLACG-KSSIIVA 418
Query: 194 GGGKVLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
+SWG + G LG+G + S T + +K L+GV + G+ HS
Sbjct: 419 ADDSTISWGPSPTFGELGYGDN-------KPKSSTTAQEVKTLDGVYSEQVVMGYSHSLV 471
Query: 253 I 253
I
Sbjct: 472 I 472
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/108 (32%), Positives = 57/108 (52%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
G+L++WG N+ G LG G L +P+ ++G E + +CG HT A++E
Sbjct: 142 GKLWSWGRNDKGQLGHGDTKRLEAPKLIEG-LGEEVIVAAACGRNHTLALTEN------- 193
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNF-GENVKALQVSCG 392
G+ TF G + GQLG GN D + P + + G+ + ++V+CG
Sbjct: 194 -GTVYTF---GENKLGQLGQGNQTDAVLSPATIQYNGQPI--VKVACG 235
Score = 118 (46.6 bits), Expect = 0.00056, P = 0.00056
Identities = 39/160 (24%), Positives = 70/160 (43%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY 93
Q+R + WG G YGRLG + P + F+ A + CG + L+E G ++
Sbjct: 321 QKRVFS-WGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLF 379
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN- 152
G+ + + E+ Y + G K + ++ G S + D WG +
Sbjct: 380 FWGVTNTSR----ESTMYPKAVQDLCGWK--IRSLACG-KSSIIVAADDSTISWGPSPTF 432
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G+LG G K +V+ L G++++Q +G+ S+ +
Sbjct: 433 GELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVI 472
Score = 82 (33.9 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 326 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE-- 382
V+CG HT + S+ ++ +WG+GG G+LGH D + P +V +
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGY------------GRLGHAEQKDEMVPRLVKLFDFP 355
Query: 383 NVKALQVSCGFNHTGALLE 401
A Q+ CG+ + AL E
Sbjct: 356 GRGATQIYCGYQCSFALSE 374
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 154 (59.3 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 56/185 (30%), Positives = 86/185 (46%)
Query: 123 KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGK-KAAKVIPIPTKVE-CLSGIFT 179
K V+I G H S ++ G++Y G N NG+LG G+ K +P + C++ I
Sbjct: 751 KSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKII- 809
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ A G+ + V+ G V WG +LG +G ++ Y P +K L V
Sbjct: 810 -KIACGYNYVLCVSDVGLVYGWGKNDKSQLG-------IGVIKDF--YEPVHVKNLTNV- 858
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG-NHARRPSLISGGELYTWGSNENG 298
+ I A G+ HSACI N + V+ + G N S G+LY WG+ E+G
Sbjct: 859 INIFA-GYDHSACII-NKLLDKGNTNGVNNVNNVNGVNGVNNYSSDECGDLYIWGNAESG 916
Query: 299 CLGIG 303
+G+G
Sbjct: 917 KVGLG 921
Score = 151 (58.2 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 43/146 (29%), Positives = 67/146 (45%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
K V+ S G HS A + G++Y WG NG+LGLG I K + + G+ K+
Sbjct: 438 KNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGN-----IKSYNKPQLIKGLRNKR 492
Query: 182 ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-G 237
G S + V +WG G +LGHG + + Y P+L++ L
Sbjct: 493 ILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDI--------YYPKLVECLNHN 544
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFG 263
KV + + G +S ++ G VY++G
Sbjct: 545 KKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 143 (55.4 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 65/252 (25%), Positives = 111/252 (44%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQ--LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
G + E G +Y G + G+ LG+ G L P +I+ + K + + S G HS
Sbjct: 895 GVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINK-IYKCSLGNSHSLF 953
Query: 138 ITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+T ELY+ G N+NG+LGL +K+ ++ +PTKV + I+ K G S+ ++
Sbjct: 954 LTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSV 1013
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G + +G G G+ S S Y E VK + H +
Sbjct: 1014 DGFIYIFGEFIKGSNGNSNNMSC----EVISLYN-------EITNVKYMNGKYEHVFFLT 1062
Query: 255 ENGRVYIFGDRAVDKMLF---QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ +++ G+ ++L +E N+ ++P LI T+ EN + I SI H+
Sbjct: 1063 YDNKLFGIGNNKNCQILCDNEKENNYIKKPKLI------TYFLKENNKI-IESIFSFHNV 1115
Query: 312 ERVQGPFSESPV 323
+Q F+ S +
Sbjct: 1116 TFIQ--FNNSEI 1125
Score = 136 (52.9 bits), Expect = 5.9e-05, Sum P(4) = 5.9e-05
Identities = 44/143 (30%), Positives = 73/143 (51%)
Query: 68 FEKHSL--KA---LACGGAH-TLFLTETGCVYATGLNDFGQLGISE-NIGYSLE-PLRIS 119
FEK+ L K+ + G H ++FL E+G VY G N G+LG E N+ P+ ++
Sbjct: 743 FEKNKLVLKSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN 802
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
++++I+ GY++ ++ G +Y WGKN QLG+G K P V+ L+ +
Sbjct: 803 ICVNKIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIG--VIKDFYEPVHVKNLTNVIN 860
Query: 180 KQAALGFEQSVAVTGGGKVLSWG 202
A G++ S + K+L G
Sbjct: 861 IFA--GYDHSACIIN--KLLDKG 879
Score = 131 (51.2 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + S+A G + SWG GG+GRLG LG ++S ++ P+LIK L ++
Sbjct: 447 GSKHSLACNLHGDIYSWGYGGNGRLG-------LGNIKSYNK--PQLIKGLRNKRILYVC 497
Query: 245 AGFLHSACIDENGRVYIFGD 264
AG HS CID N VY +G+
Sbjct: 498 AGTSHSGCIDSNYNVYTWGN 517
Score = 131 (51.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 37/112 (33%), Positives = 55/112 (49%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G++Y+WG NG LG+G+I + P+ ++G + V G H+ I S + TWG
Sbjct: 458 GDIYSWGYGGNGRLGLGNIKSYNKPQLIKG-LRNKRILYVCAGTSHSGCIDSNYNVYTWG 516
Query: 346 WGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVN-FGENVKALQVSCG-FN 394
+G F + LGHGND +D +P +V N K +S G FN
Sbjct: 517 ----NGKFYK--------LGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFN 556
Score = 130 (50.8 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 46/141 (32%), Positives = 63/141 (44%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-K 123
CSA KHSL AC H G +Y+ G G+LG+ Y+ +P I GL+ K
Sbjct: 444 CSAGSKHSL---ACN-LH-------GDIYSWGYGGNGRLGLGNIKSYN-KPQLIKGLRNK 491
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
++ + G HS I + +Y WG +LG G + P VECL+ K
Sbjct: 492 RILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIY-YPKLVECLNHN-KKVCM 549
Query: 184 LGFE--QSVAVTGGGKVLSWG 202
L F S+A+ G V WG
Sbjct: 550 LSFGCFNSLALNVKGDVYVWG 570
Score = 126 (49.4 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLGLG+++S +P + + + G +H+ + VY G F +
Sbjct: 463 WGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYK 522
Query: 103 LGI-SENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
LG +++I Y + + K+V +S G +S A+ V G++Y+WG
Sbjct: 523 LGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 109 (43.4 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 42/144 (29%), Positives = 63/144 (43%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+K ++CG HTL + G +Y+ G N+FG +G N EP I L+ V + G
Sbjct: 351 IKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNV-YEPTPIF-LEPHSVD-NNGD 407
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
++ D N+N KK + K + + +A G + S+A
Sbjct: 408 NNDDDYDDDN-------NNNSTYKFHKKEDSI-----KWDKKKNVVIHCSA-GSKHSLAC 454
Query: 193 TGGGKVLSWGAGGSGRLGHGQESS 216
G + SWG GG+GRLG G S
Sbjct: 455 NLHGDIYSWGYGGNGRLGLGNIKS 478
Score = 92 (37.4 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
L+ G++YT G N+NG LG G ++ + + + +++CG+ + +S+
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCVSDVG- 825
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
L +GWG + QLG G D+ P V NV + + G++H+ ++
Sbjct: 826 LVYGWG----------KNDKSQLGIGVIKDFYEPVHVKNLTNV--INIFAGYDHSACII 872
Score = 89 (36.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 34/118 (28%), Positives = 51/118 (43%)
Query: 127 QISTGYHHSSAITV---DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQ 181
+ISTG H + + ++ WG NS QLGLG + + PT V C S I
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINN-RFVNNPTVV-CFFDSFIVASI 78
Query: 182 AALGFEQSVAVTG-----GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
+ V V G V S+G G +G LG+ ++ + FL + + +KE
Sbjct: 79 CCTNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKKKRELPNFLEHEEKKNIQKVKE 136
Score = 89 (36.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 41/184 (22%), Positives = 74/184 (40%)
Query: 227 YTP---RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS- 282
+TP +++ + K+K + G +H+ I G +Y +G + + P+
Sbjct: 335 FTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTP 394
Query: 283 -LISGGELYTWGSNENGCL----GIGSIDVLHSPE-RVQGPFSESPVDQVSCGWKHTAAI 336
+ + G N + S H E ++ ++ V S G KH+ A
Sbjct: 395 IFLEPHSVDNNGDNNDDDYDDDNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLAC 454
Query: 337 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+ G I +WG+GG+ G+LG GN Y P ++ N + L V G +H
Sbjct: 455 NLHGDIYSWGYGGN------------GRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSH 502
Query: 396 TGAL 399
+G +
Sbjct: 503 SGCI 506
Score = 73 (30.8 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
G +Y WG N+ LGIG I + P V+ + + V + G+ H+A I K+L G
Sbjct: 825 GLVYGWGKNDKSQLGIGVIKDFYEPVHVK---NLTNVINIFAGYDHSACIIN-KLLDKG 879
Score = 67 (28.6 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLT-----ETGC-VYA 94
WG +LGLG + +R+ P V F+ + ++ C T L + GC VY+
Sbjct: 44 WGGNSCNQLGLG-INNRFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSVYS 102
Query: 95 TGLNDFGQLG 104
G + G LG
Sbjct: 103 FGKGNNGLLG 112
Score = 67 (28.6 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 285 SGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 342
S +YTWG+ + LG G+ D+ ++ P+ V+ V +S G ++ A++ +G +
Sbjct: 508 SNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVY 567
Query: 343 TWG 345
WG
Sbjct: 568 VWG 570
Score = 51 (23.0 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPV 63
WG D +LG+G ++ + PV
Sbjct: 830 WGKNDKSQLGIGVIKDFYEPV 850
Score = 47 (21.6 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 285 SGGELYTWG--SNENGCLGI-GSIDVLHSPERV 314
+ E++ WG +N + C+GI +I L P ++
Sbjct: 1121 NNSEIFAWGYTNNYHLCIGIPNNIKYLKHPTKI 1153
Score = 45 (20.9 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDY 372
GG G +S D SG + G+D DY
Sbjct: 1632 GGGDGDYSGDDIYSGDDIYSGDD-DY 1656
Score = 43 (20.2 bits), Expect = 4.2e-09, Sum P(4) = 4.2e-09
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
WG ++G +G G+ ++ + P E HS+
Sbjct: 373 WGYNNFGCIGNGTNQNVYEPTPIF-LEPHSV 402
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 154 (59.3 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 56/185 (30%), Positives = 86/185 (46%)
Query: 123 KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGK-KAAKVIPIPTKVE-CLSGIFT 179
K V+I G H S ++ G++Y G N NG+LG G+ K +P + C++ I
Sbjct: 751 KSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKII- 809
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ A G+ + V+ G V WG +LG +G ++ Y P +K L V
Sbjct: 810 -KIACGYNYVLCVSDVGLVYGWGKNDKSQLG-------IGVIKDF--YEPVHVKNLTNV- 858
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG-NHARRPSLISGGELYTWGSNENG 298
+ I A G+ HSACI N + V+ + G N S G+LY WG+ E+G
Sbjct: 859 INIFA-GYDHSACII-NKLLDKGNTNGVNNVNNVNGVNGVNNYSSDECGDLYIWGNAESG 916
Query: 299 CLGIG 303
+G+G
Sbjct: 917 KVGLG 921
Score = 151 (58.2 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 43/146 (29%), Positives = 67/146 (45%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
K V+ S G HS A + G++Y WG NG+LGLG I K + + G+ K+
Sbjct: 438 KNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGN-----IKSYNKPQLIKGLRNKR 492
Query: 182 ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-G 237
G S + V +WG G +LGHG + + Y P+L++ L
Sbjct: 493 ILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDI--------YYPKLVECLNHN 544
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFG 263
KV + + G +S ++ G VY++G
Sbjct: 545 KKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 143 (55.4 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 65/252 (25%), Positives = 111/252 (44%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQ--LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
G + E G +Y G + G+ LG+ G L P +I+ + K + + S G HS
Sbjct: 895 GVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINK-IYKCSLGNSHSLF 953
Query: 138 ITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+T ELY+ G N+NG+LGL +K+ ++ +PTKV + I+ K G S+ ++
Sbjct: 954 LTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSV 1013
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G + +G G G+ S S Y E VK + H +
Sbjct: 1014 DGFIYIFGEFIKGSNGNSNNMSC----EVISLYN-------EITNVKYMNGKYEHVFFLT 1062
Query: 255 ENGRVYIFGDRAVDKMLF---QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ +++ G+ ++L +E N+ ++P LI T+ EN + I SI H+
Sbjct: 1063 YDNKLFGIGNNKNCQILCDNEKENNYIKKPKLI------TYFLKENNKI-IESIFSFHNV 1115
Query: 312 ERVQGPFSESPV 323
+Q F+ S +
Sbjct: 1116 TFIQ--FNNSEI 1125
Score = 136 (52.9 bits), Expect = 5.9e-05, Sum P(4) = 5.9e-05
Identities = 44/143 (30%), Positives = 73/143 (51%)
Query: 68 FEKHSL--KA---LACGGAH-TLFLTETGCVYATGLNDFGQLGISE-NIGYSLE-PLRIS 119
FEK+ L K+ + G H ++FL E+G VY G N G+LG E N+ P+ ++
Sbjct: 743 FEKNKLVLKSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN 802
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
++++I+ GY++ ++ G +Y WGKN QLG+G K P V+ L+ +
Sbjct: 803 ICVNKIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIG--VIKDFYEPVHVKNLTNVIN 860
Query: 180 KQAALGFEQSVAVTGGGKVLSWG 202
A G++ S + K+L G
Sbjct: 861 IFA--GYDHSACIIN--KLLDKG 879
Score = 131 (51.2 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + S+A G + SWG GG+GRLG LG ++S ++ P+LIK L ++
Sbjct: 447 GSKHSLACNLHGDIYSWGYGGNGRLG-------LGNIKSYNK--PQLIKGLRNKRILYVC 497
Query: 245 AGFLHSACIDENGRVYIFGD 264
AG HS CID N VY +G+
Sbjct: 498 AGTSHSGCIDSNYNVYTWGN 517
Score = 131 (51.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 37/112 (33%), Positives = 55/112 (49%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G++Y+WG NG LG+G+I + P+ ++G + V G H+ I S + TWG
Sbjct: 458 GDIYSWGYGGNGRLGLGNIKSYNKPQLIKG-LRNKRILYVCAGTSHSGCIDSNYNVYTWG 516
Query: 346 WGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVN-FGENVKALQVSCG-FN 394
+G F + LGHGND +D +P +V N K +S G FN
Sbjct: 517 ----NGKFYK--------LGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFN 556
Score = 130 (50.8 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 46/141 (32%), Positives = 63/141 (44%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-K 123
CSA KHSL AC H G +Y+ G G+LG+ Y+ +P I GL+ K
Sbjct: 444 CSAGSKHSL---ACN-LH-------GDIYSWGYGGNGRLGLGNIKSYN-KPQLIKGLRNK 491
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
++ + G HS I + +Y WG +LG G + P VECL+ K
Sbjct: 492 RILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIY-YPKLVECLNHN-KKVCM 549
Query: 184 LGFE--QSVAVTGGGKVLSWG 202
L F S+A+ G V WG
Sbjct: 550 LSFGCFNSLALNVKGDVYVWG 570
Score = 126 (49.4 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLGLG+++S +P + + + G +H+ + VY G F +
Sbjct: 463 WGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYK 522
Query: 103 LGI-SENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
LG +++I Y + + K+V +S G +S A+ V G++Y+WG
Sbjct: 523 LGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 109 (43.4 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 42/144 (29%), Positives = 63/144 (43%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+K ++CG HTL + G +Y+ G N+FG +G N EP I L+ V + G
Sbjct: 351 IKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNV-YEPTPIF-LEPHSVD-NNGD 407
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
++ D N+N KK + K + + +A G + S+A
Sbjct: 408 NNDDDYDDDN-------NNNSTYKFHKKEDSI-----KWDKKKNVVIHCSA-GSKHSLAC 454
Query: 193 TGGGKVLSWGAGGSGRLGHGQESS 216
G + SWG GG+GRLG G S
Sbjct: 455 NLHGDIYSWGYGGNGRLGLGNIKS 478
Score = 92 (37.4 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
L+ G++YT G N+NG LG G ++ + + + +++CG+ + +S+
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCVSDVG- 825
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
L +GWG + QLG G D+ P V NV + + G++H+ ++
Sbjct: 826 LVYGWG----------KNDKSQLGIGVIKDFYEPVHVKNLTNV--INIFAGYDHSACII 872
Score = 89 (36.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 34/118 (28%), Positives = 51/118 (43%)
Query: 127 QISTGYHHSSAITV---DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQ 181
+ISTG H + + ++ WG NS QLGLG + + PT V C S I
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINN-RFVNNPTVV-CFFDSFIVASI 78
Query: 182 AALGFEQSVAVTG-----GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
+ V V G V S+G G +G LG+ ++ + FL + + +KE
Sbjct: 79 CCTNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKKKRELPNFLEHEEKKNIQKVKE 136
Score = 89 (36.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 41/184 (22%), Positives = 74/184 (40%)
Query: 227 YTP---RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS- 282
+TP +++ + K+K + G +H+ I G +Y +G + + P+
Sbjct: 335 FTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTP 394
Query: 283 -LISGGELYTWGSNENGCL----GIGSIDVLHSPE-RVQGPFSESPVDQVSCGWKHTAAI 336
+ + G N + S H E ++ ++ V S G KH+ A
Sbjct: 395 IFLEPHSVDNNGDNNDDDYDDDNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLAC 454
Query: 337 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+ G I +WG+GG+ G+LG GN Y P ++ N + L V G +H
Sbjct: 455 NLHGDIYSWGYGGN------------GRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSH 502
Query: 396 TGAL 399
+G +
Sbjct: 503 SGCI 506
Score = 73 (30.8 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
G +Y WG N+ LGIG I + P V+ + + V + G+ H+A I K+L G
Sbjct: 825 GLVYGWGKNDKSQLGIGVIKDFYEPVHVK---NLTNVINIFAGYDHSACIIN-KLLDKG 879
Score = 67 (28.6 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLT-----ETGC-VYA 94
WG +LGLG + +R+ P V F+ + ++ C T L + GC VY+
Sbjct: 44 WGGNSCNQLGLG-INNRFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSVYS 102
Query: 95 TGLNDFGQLG 104
G + G LG
Sbjct: 103 FGKGNNGLLG 112
Score = 67 (28.6 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 285 SGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 342
S +YTWG+ + LG G+ D+ ++ P+ V+ V +S G ++ A++ +G +
Sbjct: 508 SNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVY 567
Query: 343 TWG 345
WG
Sbjct: 568 VWG 570
Score = 51 (23.0 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPV 63
WG D +LG+G ++ + PV
Sbjct: 830 WGKNDKSQLGIGVIKDFYEPV 850
Score = 47 (21.6 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 285 SGGELYTWG--SNENGCLGI-GSIDVLHSPERV 314
+ E++ WG +N + C+GI +I L P ++
Sbjct: 1121 NNSEIFAWGYTNNYHLCIGIPNNIKYLKHPTKI 1153
Score = 45 (20.9 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDY 372
GG G +S D SG + G+D DY
Sbjct: 1632 GGGDGDYSGDDIYSGDDIYSGDD-DY 1656
Score = 43 (20.2 bits), Expect = 4.2e-09, Sum P(4) = 4.2e-09
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
WG ++G +G G+ ++ + P E HS+
Sbjct: 373 WGYNNFGCIGNGTNQNVYEPTPIF-LEPHSV 402
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 185 (70.2 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 61/211 (28%), Positives = 98/211 (46%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQ 127
EK+ A AHT+ + G N GQLG+S++I + +P I L++ +VQ
Sbjct: 114 EKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQ 173
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+ G HH+ +T G +Y G+N +GQ G+G A + PT + G + G E
Sbjct: 174 AAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYS-PTPIN-YRGPPIIRIGCGAE 231
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS---EYTPRLI-------KE--- 234
SV + G + ++G G+LGH ++ S E +P+ + KE
Sbjct: 232 FSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHV 291
Query: 235 --LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++GV++ A G H+ ID RVY +G
Sbjct: 292 TPVDGVQIVDFACGNNHTVAIDSKKRVYSWG 322
Score = 185 (70.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 68/246 (27%), Positives = 107/246 (43%)
Query: 38 RFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R A +G G+LGL ++ +P + A E+ ++ A G HTLFLT+TG VYA G
Sbjct: 135 RKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACG 194
Query: 97 LNDFGQLGISE---NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
N GQ G+ NI YS P+ G +++I G S + + G L+ +G G
Sbjct: 195 ENKSGQCGVGNTHANI-YSPTPINYRG--PPIIRIGCGAEFSVILDIKGSLHTFGLPEYG 251
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS----VAVTGGGKVLSWGAGGSGRL 209
QLG A K K+ K+ L E+S V G +++ + G + +
Sbjct: 252 QLGHNTDA-KYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTV 310
Query: 210 GHGQESSI----------LGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENG 257
+ + LG E PRL+K + +G + G S ++E G
Sbjct: 311 AIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELG 370
Query: 258 RVYIFG 263
+++FG
Sbjct: 371 LLFLFG 376
Score = 75 (31.5 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 46/187 (24%), Positives = 75/187 (40%)
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS------ 285
+ ++GV++ A G H+ ID RVY +G ++ E P L+
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQG 350
Query: 286 -GGELYTWGSNENGCLG-IGSIDVLHSPERV-QGPFSESPVDQVSCGWKHT--------A 334
GG GS + + +G + + ++ + PV +S GW T
Sbjct: 351 RGGRSVFCGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLS-GWNITDIGCANTSI 409
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
IS L WG S TF E G G+ + V P + +N+K QV+ G++
Sbjct: 410 MISADDTLI-AWGASP-TFGELGI---GEFQKSSTVPKEVPKL----DNIKIPQVTMGYS 460
Query: 395 HTGALLE 401
HT L++
Sbjct: 461 HTVLLVD 467
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 195 (73.7 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 60/183 (32%), Positives = 95/183 (51%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 12 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 69
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 70 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 129
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
L +AA +P+P K+E K A+ G+ VA T GK+ +WG G+LG
Sbjct: 130 LA--NEAA-FLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 186
Query: 213 QES 215
E+
Sbjct: 187 LET 189
Score = 157 (60.3 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 52/188 (27%), Positives = 84/188 (44%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTE G V + G N FGQLG+ + P I K++VV I+ G H+ A T G ++
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 146 MWGKNSNGQLGLGKKAA--KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
WG G G++ + +P+ P++V L G + S ++T G+
Sbjct: 62 QWG---TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDE 255
V WG+ HGQ ++ FL P+ I+ + KV +G+ H E
Sbjct: 119 VYVWGSNK-----HGQLANEAAFLP-----VPQKIEAHCFQNEKVTAIWSGWTHLVAQTE 168
Query: 256 NGRVYIFG 263
G+++ +G
Sbjct: 169 TGKMFTWG 176
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-G 339
SL GE+Y WGSN++G L L P++++ F V + GW H A +E G
Sbjct: 112 SLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETG 170
Query: 340 KILTWG 345
K+ TWG
Sbjct: 171 KMFTWG 176
Score = 44 (20.5 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 287 GELYTWGSNENGCLG 301
G+++TWG + G LG
Sbjct: 170 GKMFTWGRADYGQLG 184
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 193 (73.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 66/227 (29%), Positives = 103/227 (45%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCS--AFEKHSLKALACGGAHTLFLTETGCV 92
L+ L G YG+LGLG E P + + + +K++A GG H+ +T G +
Sbjct: 12 LRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGEL 71
Query: 93 YATGLNDFGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+ G N GQLG++ E++ +SG V +++ G+ + + G + G N
Sbjct: 72 FVCGHNKAGQLGLNHTEDVLCFTLCTALSGFC--VQEVACGWDFTIILGRAGLVLSCGSN 129
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ GQLG+ + + + IP K++ A G ++A T G V WG G + R
Sbjct: 130 AFGQLGVPQISGPCL-IPQKIKQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAK 188
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ L + E P IK LE VKVK AAG H C+ G
Sbjct: 189 RVHQGKTLPVFWAAKE--PCEIKGLEDVKVKRVAAGSYH--CVSLTG 231
Score = 171 (65.3 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 58/190 (30%), Positives = 88/190 (46%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR--ISGLKKEVVQISTGYH 133
+AC H+ + CV G N +GQLG+ + L +S +++ I+ G
Sbjct: 4 IAC---HSHLILRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGG 60
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+ IT GEL++ G N GQLGL V+ T LSG ++ A G++ ++ +
Sbjct: 61 HSAVITGAGELFVCGHNKAGQLGLNH-TEDVLCF-TLCTALSGFCVQEVACGWDFTIILG 118
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G VLS G+ G+LG Q S P+ IK+ K AAG H+
Sbjct: 119 RAGLVLSCGSNAFGQLGVPQISGPC--------LIPQKIKQSLKEKAVGIAAGLRHALAA 170
Query: 254 DENGRVYIFG 263
E+G V+ +G
Sbjct: 171 TESGLVFQWG 180
Score = 95 (38.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 37/124 (29%), Positives = 52/124 (41%)
Query: 148 GKNSNGQLGLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G NS GQLGLG K ++P K V C K A G S +TG G++ G +
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDI-KSIAGGGGHSAVITGAGELFVCGHNKA 79
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG +L F T+ L G V+ A G+ + + G V G A
Sbjct: 80 GQLGLNHTEDVLCFTLCTA---------LSGFCVQEVACGWDFTIILGRAGLVLSCGSNA 130
Query: 267 VDKM 270
++
Sbjct: 131 FGQL 134
Score = 69 (29.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 287 GELYTWGSNENGCLGIGSID-VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 344
G + + GSN G LG+ I P++++ E V ++ G +H A +E G + W
Sbjct: 121 GLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKEKAVG-IAAGLRHALAATESGLVFQW 179
Query: 345 GWG 347
G G
Sbjct: 180 GTG 182
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 210 (79.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 94/349 (26%), Positives = 144/349 (41%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF----GQLGISENIGYSLEPLRI- 118
VC S AL G C A G D G L + N S L+
Sbjct: 42 VCQVSASWSYTALVTRGGRVELSGSVSCA-ADGCRDVWASEGLLVVQRNKSGSGTELQAW 100
Query: 119 ---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA-AKVIPIPTKVECL 174
S L+ E + + + +S GE + G L L A A + P P + L
Sbjct: 101 VPGSALQGEPLWVQ---NLASGAKAQGEDEPGSEPRMGTLPLLPCARAYMTPQPPFCQPL 157
Query: 175 SG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ + +Q LG E ++ + G+V SWG G G+LGHG S+ +E PRL++
Sbjct: 158 APELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHG---SL------EAELEPRLLE 208
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG-ELYTW 292
L+G+++ AAG HS C+ E G +YI+G ++ + + ++ EL
Sbjct: 209 ALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELNDD 268
Query: 293 G-SNENGCLG-IGS----IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
G E L +G+ I + P + P V + SCG +HTA ++ G++ TWG
Sbjct: 269 GLRGEEAALADVGAPAHFIAIQPFPALLDLPLGSDAV-KASCGSRHTAVVTRTGELYTWG 327
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCG 392
WG GQLGH + P V + ++ V+CG
Sbjct: 328 WG------------KYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCG 364
Score = 134 (52.2 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG GSLE+ P + A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 185 WGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 244
Query: 103 LGISENIGYSLEPLR 117
L + G + +R
Sbjct: 245 LALPTRSGTEKKTVR 259
Score = 40 (19.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +++ A++ SCG HT +
Sbjct: 293 PALLDLPLGSDAVKASCGSRHTAVV 317
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 221 (82.9 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 57/191 (29%), Positives = 101/191 (52%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G GD+GRLGLG SL + P + + + H + ++ GG H+L LT G V++ G ND
Sbjct: 362 FGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQ 421
Query: 101 GQLGIS-----ENIGYSLEPLRISGLKKE----VVQISTGYHHSSAITVDGELYMWGKNS 151
GQLGI + I ++ + S +++ ++++S G +HS AI+ + + Y WG++
Sbjct: 422 GQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSD 481
Query: 152 NGQLG--LGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G LG + + + +P I + + + + GF+ +VA++ G + SWG
Sbjct: 482 YGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQ 541
Query: 208 RLGHGQESSIL 218
RLG + + L
Sbjct: 542 RLGFKSDENQL 552
Score = 163 (62.4 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 41/143 (28%), Positives = 75/143 (52%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
K ++V++S G + S+ IT G L+ +G+ +G+LGLG+++ + P V+ L G F
Sbjct: 337 KIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIID 396
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV- 240
+ G S+ +T G V S+G G+LG G S+ + + ++ + + +
Sbjct: 397 MSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINII 456
Query: 241 KIAAAGFLHSACIDENGRVYIFG 263
K++A G+ HS I +N Y +G
Sbjct: 457 KVSAGGY-HSIAISDNNDTYAWG 478
Score = 142 (55.0 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 37/126 (29%), Positives = 61/126 (48%)
Query: 39 FAALWGNG--DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
+ +WGNG +Y + S+ + + + ++ G H+ F+T+ G +Y G
Sbjct: 160 YITIWGNGIRNYKNCNMSSIG------FSEMYNQQKIVLISTGAIHSSFITDQGNLYTFG 213
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKE----VVQISTGYHHSSAITVDGELYMWGKNSN 152
G+LG YS P + + + VV I+ G HS A+T+ G++Y WG N +
Sbjct: 214 DGLLGKLGHGNLESYS-SPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDS 272
Query: 153 GQLGLG 158
QLGLG
Sbjct: 273 CQLGLG 278
Score = 139 (54.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 37/139 (26%), Positives = 70/139 (50%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKH--------SLKALACGGAHTLFLTETGCVY 93
+G D G+LG+G ++ P F+ ++ ++ GG H++ +++ Y
Sbjct: 416 FGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTY 475
Query: 94 ATGLNDFGQLGISENI-GYSLEPLRISGLKKEV-----VQISTGYHHSSAITVDGELYMW 147
A G +D+G LG S ++ G P+ I+ V + +S+G+ H+ A+++DG LY W
Sbjct: 476 AWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSW 535
Query: 148 GKNSNGQLGLGKKAAKVIP 166
G N+ +LG ++ P
Sbjct: 536 GCNAGQRLGFKSDENQLTP 554
Score = 132 (51.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
++ G+ ++ +S +IG+S E ++++V ISTG HSS IT G LY +G
Sbjct: 163 IWGNGIRNYKNCNMS-SIGFS-EMYN----QQKIVLISTGAIHSSFITDQGNLYTFGDGL 216
Query: 152 NGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G + P + + + A G + S+A+T GKV SWG S +LG
Sbjct: 217 LGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLG 276
Query: 211 HGQESS 216
G SS
Sbjct: 277 LGNGSS 282
Score = 102 (41.0 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 42/132 (31%), Positives = 63/132 (47%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSES------PVD--QVSCGWKHT 333
L + G ++++G N+ G LGIG + P+++Q F S P++ +VS G H+
Sbjct: 407 LTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQW-FQTSQQQQQQPINIIKVSAGGYHS 465
Query: 334 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYIHPTIVNFG----ENVKAL 387
AIS+ T+ WG S G LG DV D P ++N +NVK +
Sbjct: 466 IAISDNND-TYAWG----------RSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFI 514
Query: 388 QVSCGFNHTGAL 399
VS GF H A+
Sbjct: 515 DVSSGFQHNVAM 526
Score = 70 (29.7 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQV-----SCGWKHT 333
++ + Y WG ++ G LG SIDV + P + + VD V S G++H
Sbjct: 467 AISDNNDTYAWGRSDYGVLGT-SIDVQGDRNLPVLINS--NSVVVDNVKFIDVSSGFQHN 523
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT--IVNFGENVKALQVS 390
A+S +G + +WG ++G +LG +D + + P +N ++ K L +
Sbjct: 524 VAMSIDGSLYSWGC------------NAGQRLGFKSDENQLTPKKCFIN-SKDSKPLLFT 570
Query: 391 CG 392
CG
Sbjct: 571 CG 572
Score = 65 (27.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 280 RPSLISG-GELYTWGSNENGCLGIGSIDVL--HSPERVQGPFSESPVDQVSCGWKHTAAI 336
R ++I+ G L+T+G ++G LG+G +L +P+ VQ +D S G
Sbjct: 349 RSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLT 408
Query: 337 SEGKILTWG 345
++G + ++G
Sbjct: 409 NKGLVFSFG 417
Score = 46 (21.3 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 271 LFQEGNHARRPSLISGGELYTWGSNEN 297
+F + N + ISGG L W N N
Sbjct: 1218 VFYDRNAFMQMEYISGGNLLDWCRNNN 1244
Score = 40 (19.1 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 43 WGNGDYGRLGLGS 55
WG D +LGLG+
Sbjct: 267 WGGNDSCQLGLGN 279
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 384 VKALQVSCGFNHTGALLE 401
+K +++SCG N + + +
Sbjct: 338 IKIVKLSCGTNRSAVITD 355
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 172 (65.6 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 59/186 (31%), Positives = 87/186 (46%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHS 135
A G H + L E G VY+ FG+L +N S EP+ + L ++ VV ++ G HS
Sbjct: 44 ALGARHGVLLVEGGQVYS-----FGELPWKQNQTSSAEPILEAVLSEQRVVFVAAGSAHS 98
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK-------QAALGFEQ 188
+T DG ++MWG+N +GQ GL VIP PT V L T + A G +
Sbjct: 99 GVVTEDGGVHMWGENVHGQCGL--LGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQH 156
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE-YTPRLIKELEGVKVKIAAAGF 247
++A++ +V +WG+G LG ST + P+ + L G V A G
Sbjct: 157 TLALSAKHEVWAWGSGCQ-----------LGLNTSTFPVWKPQKVDHLSGRHVLQVACGS 205
Query: 248 LHSACI 253
HS +
Sbjct: 206 AHSVAL 211
Score = 130 (50.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 35/108 (32%), Positives = 56/108 (51%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++ WG+ +GQLG G ++ P V+ L+G + A G S+A+T +V SWG
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQP--DCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWG 607
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
SG+LGH + S + + P+L K +G++V AG H+
Sbjct: 608 CNTSGQLGH---------MESPTTF-PQLTKLSDGIRVWDIGAGLQHT 645
Score = 129 (50.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 43/141 (30%), Positives = 68/141 (48%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRIS 119
P++ + + + +A G AH+ +TE G V+ G N GQ G+ +G S+ P +
Sbjct: 77 PILEAVLSEQRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGL---LGLSVIPNPTPVG 133
Query: 120 GLKKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
L E +++++ G H+ A++ E++ WG S QLGL V P KV
Sbjct: 134 VLDSEATPPQTVKILEVACGDQHTLALSAKHEVWAWG--SGCQLGLNTSTFPVWK-PQKV 190
Query: 172 ECLSGIFTKQAALGFEQSVAV 192
+ LSG Q A G SVA+
Sbjct: 191 DHLSGRHVLQVACGSAHSVAL 211
Score = 127 (49.8 bits), Expect = 0.00027, P = 0.00027
Identities = 58/187 (31%), Positives = 86/187 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG G L R +P V S K LK +A G H+L LT V++ G N G
Sbjct: 554 WGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLK-VAAGAHHSLALTAQSQVFSWGCNTSG 612
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG E+ + ++S G++ V I G H+ + DG+ +GQ
Sbjct: 613 QLGHMESPTTFPQLTKLSDGIR--VWDIGAGLQHT-LLLADGDCIQPILYYSGQ------ 663
Query: 161 AAKVIPIPTKVECLSGIFTKQAAL-GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K +P PT+ E + +T+Q L F ++ G V S AGG + +++G
Sbjct: 664 QVKEVPEPTEEEEQTAEYTQQPVLLPFCMNL-----GYVSSVYAGGR-TCAALTDCNVMG 717
Query: 220 FLRSTSE 226
F+ S E
Sbjct: 718 FIASLHE 724
Score = 95 (38.5 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
A PSL + E+++WG ++G LG G + P+ V+ + V +V+ G H+ A++
Sbjct: 542 AHLPSLQT--EVWSWGQGQDGQLGHGDLLPRLQPDCVKS-LNGKEVLKVAAGAHHSLALT 598
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
+ ++ +WG S GQLGH + P + + ++ + G HT
Sbjct: 599 AQSQVFSWGCNTS------------GQLGH-MESPTTFPQLTKLSDGIRVWDIGAGLQHT 645
Score = 85 (35.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V SWG G G+LGHG +L L+ P +K L G +V AAG HS +
Sbjct: 550 EVWSWGQGQDGQLGHGD---LLPRLQ------PDCVKSLNGKEVLKVAAGAHHSLALTAQ 600
Query: 257 GRVYIFG 263
+V+ +G
Sbjct: 601 SQVFSWG 607
Score = 84 (34.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 30/105 (28%), Positives = 49/105 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHS-----LKAL--ACGGAHTLFLTETGCVYA 94
+WG +G+ GL L P + + +K L ACG HTL L+ V+A
Sbjct: 109 MWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKHEVWA 168
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G QLG++ + +P ++ L + V+Q++ G HS A+
Sbjct: 169 WGSGC--QLGLNTSTFPVWKPQKVDHLSGRHVLQVACGSAHSVAL 211
Score = 67 (28.6 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G GQLGHG+ + + P V + L+V+ G +H+ AL
Sbjct: 555 GQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLAL 597
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 155 (59.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 45/138 (32%), Positives = 73/138 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 12 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 69
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 70 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 129
Query: 155 LGLGKKAAKVIPIPTKVE 172
L A +P+P K+E
Sbjct: 130 LA---NEAAFLPVPQKIE 144
Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTE G V + G N FGQLG+ + P I K++VV I+ G H+ A T G ++
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 146 MWGKNSNGQLGLGKKAA--KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
WG G G++ + +P+ P++V L G + S ++T G+
Sbjct: 62 QWG---TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 198 VLSWGAGGSGRLGH 211
V WG+ G+L +
Sbjct: 119 VYVWGSNKHGQLAN 132
Score = 123 (48.4 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 42/129 (32%), Positives = 58/129 (44%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T +G++ G NS GQLG+ + + +P +E AA G +VA T G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIELHKEKVVCIAA-GLRHAVAATASGI 59
Query: 198 VLSWGAG--GSGR-LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
V WG G GR L GQ L + E P + LE K AG HSA +
Sbjct: 60 VFQWGTGLASCGRRLCPGQT---LPLFFTAKE--PSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 255 ENGRVYIFG 263
+ G VY++G
Sbjct: 115 DAGEVYVWG 123
Score = 87 (35.7 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAA 335
SL GE+Y WGSN++G L L P++++ F V + GW H A
Sbjct: 112 SLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 157 (60.3 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 38/117 (32%), Positives = 63/117 (53%)
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGK-NSNGQLGLGKKA 161
G+++ + +EP+ + L KK +VQ+S G H+ ++ G+LY WG NS+GQLG G
Sbjct: 18 GVNQGDKHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSK 77
Query: 162 -----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
K I + ++ LSG Q + G + + +T G + +WG+ G+L GQ
Sbjct: 78 NQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQ 134
Score = 153 (58.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 38/110 (34%), Positives = 56/110 (50%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL-NDFGQLGISENIGYSLEPLRIS- 119
P+ K ++ L+CG HTL L+++G +Y+ G N GQLG ++ +P I
Sbjct: 29 PIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKK 88
Query: 120 -GLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
L K V+Q+STG + +T G +Y WG N GQL LG+ K
Sbjct: 89 FSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNK 138
Score = 150 (57.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 39/135 (28%), Positives = 69/135 (51%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
T + + G+ D LG G + + + ++ + ++CG H L L++ VY
Sbjct: 334 TTPTKVLSFGGSNDNNFLG-GVINNELQ-MMTDQMNSIKIIQISCGSNHILALSDQYHVY 391
Query: 94 ATGLNDFGQLG-------ISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGE 143
+ G + G+LG +S+N + P +I L+++ V+ +S+GY H A+T+D
Sbjct: 392 SWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSG 451
Query: 144 LYMWGKNSNGQLGLG 158
+ WGK S+GQLG G
Sbjct: 452 ILTWGKGSDGQLGTG 466
Score = 137 (53.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 54/186 (29%), Positives = 87/186 (46%)
Query: 87 TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
T T + G ND LG N + +++ +K ++QIS G +H A++ +Y
Sbjct: 335 TPTKVLSFGGSNDNNFLGGVINNELQMMTDQMNSIK--IIQISCGSNHILALSDQYHVYS 392
Query: 147 WGKNSNGQLGLGKKAAKV------IPIPTKVECLS--GIFTKQAALGFEQSVAVTGGGKV 198
WG +G+LG G+ + V I P K++ L G+ + G+ +A+T +
Sbjct: 393 WGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGI 452
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENG 257
L+WG G G+LG G I S E R+I + E + V+I G+ +S I E
Sbjct: 453 LTWGKGSDGQLGTGFRHDIW----SPFEIK-RVIDKNEKI-VQICC-GYFNSFFITLEKR 505
Query: 258 RVYIFG 263
+Y FG
Sbjct: 506 ELYQFG 511
Score = 120 (47.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 46/187 (24%), Positives = 83/187 (44%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG+ N G K +I P +V L+ Q + G ++ ++ G + SWG
Sbjct: 11 QIFYWGRGVNQ----GDK--HIIE-PIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWG 63
Query: 203 AGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
+ S G+LGHG + G ++ +++ LIK L G V + G + + + G +Y
Sbjct: 64 SSNSSGQLGHGDSKNQYGKPKNIKKFS--LIKALSGDSVIQVSTGLDFTFVLTDQGSIYN 121
Query: 262 FGDRAVDKM-LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
+G ++ L Q N + + I+ SN N G G + + + P +
Sbjct: 122 WGSNIEGQLALGQPVNKNEKENNINNNTTNNNNSNSNKEGGGGGGGGVKGGKNILSPIPQ 181
Query: 321 SPVDQVS 327
P+DQ S
Sbjct: 182 -PLDQFS 187
Score = 105 (42.0 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 352
GSN+N LG G I+ + + + + + Q+SCG H A+S+ + + WG +
Sbjct: 344 GSNDNNFLG-GVIN--NELQMMTDQMNSIKIIQISCGSNHILALSD-QYHVYSWGSAE-- 397
Query: 353 FSEDGHSSGGQLGHGNDVDYI--HPTIVNFGENVKALQ--------VSCGFNHTGAL 399
H G+LGHG D ++ +P +N + +K+LQ VS G++H AL
Sbjct: 398 -----H---GKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMAL 446
Score = 100 (40.3 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 43/127 (33%), Positives = 56/127 (44%)
Query: 289 LYTWGSNENGCLGIGSID---VLHSPERVQGP-----FSESPVD--QVSCGWKHTAAIS- 337
+Y+WGS E+G LG G D V +P + P E V VS G+ H A++
Sbjct: 390 VYSWGSAEHGKLGHGE-DYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTL 448
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--FGENVKALQVSCG-FN 394
+ ILTWG G S GQLG G D P + +N K +Q+ CG FN
Sbjct: 449 DSGILTWGKG------------SDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFN 496
Query: 395 HTGALLE 401
LE
Sbjct: 497 SFFITLE 503
Score = 60 (26.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/77 (29%), Positives = 34/77 (44%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
KQ + G+ ++ + G+ LS G G G+LG + S + S Y P +I L
Sbjct: 567 KQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSID-KDSFVNY-PTVIPALLPYF 624
Query: 240 VKIAAAGFLHSACIDEN 256
V+ G HS I N
Sbjct: 625 VESVQCGRWHSVAIVSN 641
Score = 55 (24.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 323 VDQVSCGWKHTAAISE-GKILTWGWG--GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ Q+S G+ HT ++E G+ L+ G G G G + HSS + + V+Y PT++
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLD--HSS---IDKDSFVNY--PTVIP 618
Query: 380 FGENVKALQVSCGFNHTGALL 400
V CG H+ A++
Sbjct: 619 ALLPYFVESVQCGRWHSVAIV 639
Score = 51 (23.0 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 273 QEGNHARRPSLISGGELYTWGSNENG-CLGIG 303
+ +++ R IS G +T NENG CL IG
Sbjct: 558 ENNDNSNRIKQISSGYSHTLILNENGECLSIG 589
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 239 KVKIAAAGFLHSACIDENGRVYIFG 263
++K ++G+ H+ ++ENG G
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIG 589
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 22/69 (31%), Positives = 30/69 (43%)
Query: 283 LISGGELYTWGSNENGCLGI----GSID---VLHSPERVQG--PFSESPVDQVSCGWKHT 333
L GE + G E G LGI SID ++ P + P+ V+ V CG H+
Sbjct: 579 LNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYF---VESVQCGRWHS 635
Query: 334 AAISEGKIL 342
AI + L
Sbjct: 636 VAIVSNRNL 644
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 207 (77.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 60/189 (31%), Positives = 89/189 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLGLG+LE P + +H + + CG ++ LT + A G N +
Sbjct: 473 WGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNK 532
Query: 103 LGISENIGYSLEP--------------LRISGLKKE-VVQISTGYHHSSAITVDGELYMW 147
LG+ + I + EP + + L +E VV G HS+A+T G+ Y +
Sbjct: 533 LGL-DRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTF 591
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N +GQLG + + +P V L + A G +VA+ G+V +WG G G
Sbjct: 592 GSNQHGQLGTN--SCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARG 649
Query: 208 RLGHGQESS 216
RLG E +
Sbjct: 650 RLGRKDEET 658
Score = 179 (68.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 55/224 (24%), Positives = 100/224 (44%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++K ++CG T LT+ G + G G LG S + + L E+VQ++ G
Sbjct: 398 TIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACG 457
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFE 187
H A++ + E++ WG+ NG+LGLG + + + +P + E ++ G +
Sbjct: 458 ASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEA------QRVICGID 511
Query: 188 QSVAVTGGGKVLSWGAG-----GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
S+ +T ++L+ G+ G R+ +E S + + +T L V
Sbjct: 512 SSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVC 571
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
A G HSA + +G+ Y FG ++ ++R P L+ G
Sbjct: 572 ADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVG 615
Score = 168 (64.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 62/237 (26%), Positives = 104/237 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG G+ +P + A + + +ACG +H L ++ V+A G D G+
Sbjct: 421 FGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGR 480
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + P +++ + E ++ G S +TV+ ++ G N +LGL + +
Sbjct: 481 LGLG-TLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRIS 539
Query: 162 AKVIPIPT-KVE------CLSGIFTKQ-----AALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ P P +VE C Q A +G S AVT G+ ++G+
Sbjct: 540 SAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQ---- 595
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
HGQ LG + P L+ L +KV + A G + I +G V +G A
Sbjct: 596 -HGQ----LGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGA 647
Score = 141 (54.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 42/154 (27%), Positives = 72/154 (46%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---LGKKAAKVIP--IPT 169
PLR+ L EVVQ+S G + +T G L MW G G L ++ P +
Sbjct: 330 PLRLPMLNTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSR 389
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+E SG+ K + G + +T G ++++G+G +G LGHG + + S+ P
Sbjct: 390 FLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDV-------SQ--P 440
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++++ L G ++ A G H + V+ +G
Sbjct: 441 KIVEALLGYEMVQVACGASHVLAVSNEREVFAWG 474
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 33/95 (34%), Positives = 50/95 (52%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA 137
G AH+ +T +G Y G N GQLG + + S P + GL+ +V ++ G + A
Sbjct: 575 GTAHSAAVTASGQCYTFGSNQHGQLG-TNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVA 633
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
I DGE+ WGK + G+LG K +P P ++E
Sbjct: 634 IGADGEVCTWGKGARGRLGR-KDEETGMPRPVQLE 667
Score = 112 (44.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
A ++ + G+ YT+GSN++G LG S P V G V V+CG T AI
Sbjct: 577 AHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVG-LRAMKVTVVACGDAFTVAIG 635
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
++G++ TWG G+ G +G + ++ HP +V
Sbjct: 636 ADGEVCTWG-KGARGRLGRKDEETG--MPRPVQLEETHPYVV 674
Score = 90 (36.7 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 345
E++ WG +NG LG+G+++ +SP++V P E +V CG + ++ +IL G
Sbjct: 469 EVFAWGRGDNGRLGLGTLECHNSPQQVAVP-PEHEAQRVICGIDSSMVLTVNNQILACG 526
Score = 51 (23.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 317 PFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
P ++ PV G H+AA++ G+ T+G HG
Sbjct: 563 PLNQEPVVCADIGTAHSAAVTASGQCYTFG-SNQHG 597
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 204 (76.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 61/200 (30%), Positives = 93/200 (46%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYH 133
A C H + L G Y G N+ GQLG + I P +SGL K ++V+ + G +
Sbjct: 62 ATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRD-RPTVVSGLSKHKIVKAAAGRN 120
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSV 190
H+ ++ DG+ +G N GQLGLG + + T + C+ A G + +V
Sbjct: 121 HTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTV 180
Query: 191 --AVTGGGKVLSWGAGGSGRLGHGQESSIL---GFLRSTSEYTPR--LIKELEGVKVKIA 243
+ T G +L+ G G+LGHG ++ +R E PR I L G +
Sbjct: 181 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKV 240
Query: 244 AAGFLHSACIDENGRVYIFG 263
A G H+ +D+NG VY +G
Sbjct: 241 ACGTNHTVAVDKNGYVYTWG 260
Score = 153 (58.9 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 67/244 (27%), Positives = 100/244 (40%)
Query: 30 WISSTLQRRFAALWGNGDYGRLGLGS--------------LESRWRPVVCSAFEKHSLKA 75
W+SST G YG+LG G+ E++ RP ++ ++
Sbjct: 181 WLSSTEGASILTA-GLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVK 239
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-----IST 130
+ACG HT+ + + G VY G +G+LG E P RI ++ V +S
Sbjct: 240 VACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKD-EWAPRRIDVFQRNNVLPPNAILSA 298
Query: 131 GYHHSSAITVDGELYMWGK-NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G +S+ G+LYMWGK +NG + P + LSG + G
Sbjct: 299 GSANSACTAGGGQLYMWGKIKNNGDDWM---------YPKPMMDLSGWNLRWMDSGSMHH 349
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
V +SWG G LG+G +S++ P+ + LEG+ V A GF H
Sbjct: 350 F-VGADSSCISWGHAQYGELGYGPNGQ-----KSSA--APKKVDMLEGMHVMGVACGFCH 401
Query: 250 SACI 253
S I
Sbjct: 402 SMVI 405
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 41/123 (33%), Positives = 59/123 (47%)
Query: 110 GYSLEPLRISGLKKEVVQ-ISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
G + P R+ L ++ ++TG H A+ V+G Y WG+N GQLG G +
Sbjct: 42 GNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQR--D 99
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
PT V LS +AA G +V V+ G+ L +G G+LG G + GF+ E
Sbjct: 100 RPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKN--GFVSVEVE 157
Query: 227 YTP 229
TP
Sbjct: 158 STP 160
Score = 129 (50.5 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G + R RP V S KH + A G HT+ +++ G G N +GQ
Sbjct: 82 WGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQ 141
Query: 103 LGI-SENIGY-SLE----PLRISGLKKEVVQISTGYHHSSAIT-VDG-ELYMWGKNSNGQ 154
LG+ S G+ S+E PL + EV ++ G + ++ +G + G GQ
Sbjct: 142 LGLGSAKNGFVSVEVESTPLPCV-VSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQ 200
Query: 155 LGLG 158
LG G
Sbjct: 201 LGHG 204
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 57/253 (22%), Positives = 104/253 (41%)
Query: 169 TKVECLSGIFTKQAALGFEQSV--AVTGGGKVLSWGAGGSGRLGHGQESSIL---GFLRS 223
T + C+ A G + +V + T G +L+ G G+LGHG ++ +R
Sbjct: 159 TPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRL 218
Query: 224 TSEYTPR--LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--- 278
E PR I L G + A G H+ +D+NG VY +G ++ +E
Sbjct: 219 AYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAP 278
Query: 279 ------RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP--FSESPVDQVSCGW 330
+R +++ + + GS + C G + + G P+ +S GW
Sbjct: 279 RRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLS-GW 337
Query: 331 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQ 388
+ + G + + G+ + GH+ G+LG+G P V+ E + +
Sbjct: 338 -NLRWMDSGSM--HHFVGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMG 394
Query: 389 VSCGFNHTGALLE 401
V+CGF H+ +++
Sbjct: 395 VACGFCHSMVIVD 407
Score = 120 (47.3 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 34/102 (33%), Positives = 49/102 (48%)
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P P + L+G + A G +VAV G V +WG GG GRLGH ++
Sbjct: 224 PRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKD--------- 274
Query: 226 EYTPRLIKELEGVKV----KIAAAGFLHSACIDENGRVYIFG 263
E+ PR I + V I +AG +SAC G++Y++G
Sbjct: 275 EWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWG 316
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 181 (68.8 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 61/190 (32%), Positives = 88/190 (46%)
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HGQ LG SE PRL++ L GV ++ AAG HSAC+ + G +Y++G ++
Sbjct: 10 HGQ----LGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQL 65
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCL-----GIGSIDVLHSPERVQGPFSESPVDQ 325
G +R + + E+ L G I + P + P E V
Sbjct: 66 ----GLPSRAVAEEQAEDEDMGAGPEDPLLPGEPPGAAFISIQAFPALLDLPL-EPAVAA 120
Query: 326 VSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--FGE 382
VSCG +HTAA++ G ++ TWGWG GQLGHG+ HP V + E
Sbjct: 121 VSCGSRHTAALTRGGELNTWGWG------------KYGQLGHGDRASCDHPRRVEQLWAE 168
Query: 383 NVKALQVSCG 392
++A +V CG
Sbjct: 169 GLRAQEVVCG 178
Score = 110 (43.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
+G+LG GSLES +P + A ++A+A GG H+ +++ G +Y G N+ GQLG+
Sbjct: 10 HGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGL 67
Score = 91 (37.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIF 178
L+ V +S G H++A+T GEL WG GQLG G +A+ P +VE L G+
Sbjct: 114 LEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRAS--CDHPRRVEQLWAEGLR 171
Query: 179 TKQAALG 185
++ G
Sbjct: 172 AQEVVCG 178
Score = 91 (37.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P + L ++ ++ G HS+ ++ G+LY+WG N +GQLGL
Sbjct: 11 GQLGHG-SLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLPS 69
Query: 160 KA 161
+A
Sbjct: 70 RA 71
Score = 80 (33.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKI 242
G + A+T GG++ +WG G G+LGHG R++ ++ PR +++L EG++ +
Sbjct: 124 GSRHTAALTRGGELNTWGWGKYGQLGHGD--------RASCDH-PRRVEQLWAEGLRAQE 174
Query: 243 AAAGFLHS-ACIDENG 257
G ++ C+ + G
Sbjct: 175 VVCGPWNTYVCVLQQG 190
Score = 43 (20.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +++ VSCG HT AL
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAAL 131
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 192 (72.6 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 64/224 (28%), Positives = 102/224 (45%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHS 135
+C AH+L +T G +++ G N+ GQLG + P I GL EV V + G +H+
Sbjct: 157 SCA-AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA-PRLIEGLSHEVIVSAACGRNHT 214
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+T G ++ +G+N GQLGLG + +P P ++ TK A G E S+ +
Sbjct: 215 LALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYNGQPITKMAC-GAEFSMIMDCK 272
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTS---EYTPRLI-----KELEG-------VKV 240
G + S+G G+LGH + + + E PR + K +G V V
Sbjct: 273 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 332
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
+ A G H+ +D RV+ +G ++ E P L+
Sbjct: 333 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV 376
Score = 171 (65.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 60/237 (25%), Positives = 95/237 (40%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G + P + + + ACG HTL LTETG V+A G N GQ
Sbjct: 174 WGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 233
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ P +I + + +++ G S + G LY +G GQLG
Sbjct: 234 LGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDG- 292
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQS----VAVTGGGKVLSWGAGGSGRLGHGQESSI- 217
K I ++E + ++ A+ E++ + V G + L + +
Sbjct: 293 KFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVF 352
Query: 218 ---------LGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
LG E PRL+K + G AG+ S + E G ++ +G
Sbjct: 353 SWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 149 (57.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 49/160 (30%), Positives = 75/160 (46%)
Query: 108 NIGYSL-EPLR---ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
N+G +L P R ++G++ V + HS IT +G+L+ WG+N GQLG G K
Sbjct: 131 NLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD--TK 188
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+ P +E LS AA G ++A+T G V ++G G+LG G ++ +
Sbjct: 189 RVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVP---- 244
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+P I G + A G S +D G +Y FG
Sbjct: 245 ----SPAQIM-YNGQPITKMACGAEFSMIMDCKGNLYSFG 279
Score = 135 (52.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 50/189 (26%), Positives = 83/189 (43%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL-RISGLK-KEVVQIST 130
++ +ACG HTL L V++ G +G+LG +E + L ++ + QI
Sbjct: 332 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYA 391
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
GY S A++ G L+ WG + + + P V+ L G + A G + S+
Sbjct: 392 GYTCSFAVSEVGGLFFWGATNTSR--------ESTMYPKAVQDLCGWRIRSLACG-KSSI 442
Query: 191 AVTGGGKVLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
V +SWG + G LG+G + S + +K L+G+ + A G+ H
Sbjct: 443 IVAADESTISWGPSPTFGELGYGDH-------KPKSSTAAQEVKTLDGIFSEQVAMGYSH 495
Query: 250 SACI--DEN 256
S I DE+
Sbjct: 496 SLVIARDES 504
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 38/120 (31%), Positives = 59/120 (49%)
Query: 275 GNHARRPSLISG-GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
G+ A LI+ G+L++WG NE G LG G + +P ++G S + +CG HT
Sbjct: 156 GSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEG-LSHEVIVSAACGRNHT 214
Query: 334 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-QVSCG 392
A++E GS F G + GQLG GN D + P+ N + + +++CG
Sbjct: 215 LALTET--------GSVFAF---GENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACG 262
Score = 72 (30.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 24/88 (27%), Positives = 39/88 (44%)
Query: 317 PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
P V V+CG HT + S+ ++ +WG+GG G+LGH D + P
Sbjct: 326 PVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGY------------GRLGHAEQKDEMVP 373
Query: 376 TIVNFGE--NVKALQVSCGFNHTGALLE 401
+V + A Q+ G+ + A+ E
Sbjct: 374 RLVKLFDFPGRGASQIYAGYTCSFAVSE 401
Score = 50 (22.7 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 328 CGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CGW+ + A + I+ T S + G+LG+G D+ P + VK
Sbjct: 428 CGWRIRSLACGKSSIIV---AADESTISWGPSPTFGELGYG---DH-KPKSSTAAQEVKT 480
Query: 387 L------QVSCGFNHT 396
L QV+ G++H+
Sbjct: 481 LDGIFSEQVAMGYSHS 496
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 203 (76.5 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 78/298 (26%), Positives = 130/298 (43%)
Query: 40 AALWGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
A WG G +G+LGL +LE+ W+ P + + + + G T+ +T+ G + + G
Sbjct: 473 AYAWGEGTHGQLGLTALEA-WKHYPSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGS 531
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N LG E Y P I+ L V Q++ G H A++ +G +Y+WG ++ G LG
Sbjct: 532 NAHLALGQDEQRNYH-SPKLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALG 590
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG + P K+ LS + TK + + G + S + G++ G+ +LG +
Sbjct: 591 LGNYQQQQ-KFPQKI-LLSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRS 648
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ I F + + KV A HS + E G VY G A + +
Sbjct: 649 AKITAFKKVQLPH-----------KVTQACFSSTHSVFLVEGGYVYTMGRNAEGQRGIRH 697
Query: 275 GNHARRPSLI-SGGELYTWGSN-ENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCG 329
N P+L+ S Y +N + C + S D + + V G + P + +CG
Sbjct: 698 CNSVDHPTLVDSVKSRYIVKANCSDQCTIVASEDNIIT---VWGTRNGLPGIGSTNCG 752
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 79/308 (25%), Positives = 134/308 (43%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPT 169
+S+ P+++ K +V ++ H + DG Y WG+ ++GQLGL +A K P+
Sbjct: 441 FSMAPIQLPP-KAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWK--HYPS 497
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
++E + A G ++ VT G +LS G + L GQ+ + ++P
Sbjct: 498 RMESVRNYHVVSACAGDGFTILVTQAGSLLS--CGSNAHLALGQDEQ-------RNYHSP 548
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEG---------NH 277
+LI L V+V+ AAG H + G VY++G + +Q+ +H
Sbjct: 549 KLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSH 608
Query: 278 AR-RPS-----------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
+ +PS L + GEL+ GSN+ LG + + ++VQ P V Q
Sbjct: 609 VKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPHK---VTQ 665
Query: 326 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG--HGNDVDYIHPTIVNFGEN 383
H+ + EG G G ++ GQ G H N VD HPT+V+ ++
Sbjct: 666 ACFSSTHSVFLVEG-----------GYVYTMGRNAEGQRGIRHCNSVD--HPTLVDSVKS 712
Query: 384 VKALQVSC 391
++ +C
Sbjct: 713 RYIVKANC 720
Score = 180 (68.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 77/299 (25%), Positives = 122/299 (40%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
+A +H + + E G YA G GQLG++ + P R+ ++ VV G
Sbjct: 457 VAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAGDGF 516
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ +T G L G SN L LG+ + P + L+ + +Q A G + +A++
Sbjct: 517 TILVTQAGSLLSCG--SNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSR 574
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSAC 252
G V WG G LG LG + ++ +++ L VK K + G SA
Sbjct: 575 EGAVYVWGTSTCGALG-------LGNYQQQQKFPQKIL--LSHVKTKPSKIYCGPDTSAV 625
Query: 253 IDENGRVYIFGDRAVDKMLFQEG------NHARRPS--------------LISGGELYTW 292
+ NG +++ G +K+ FQ + P L+ GG +YT
Sbjct: 626 LFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPHKVTQACFSSTHSVFLVEGGYVYTM 685
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 351
G N G GI + + P V S V + +C + T SE I+T WG +G
Sbjct: 686 GRNAEGQRGIRHCNSVDHPTLVDSVKSRYIV-KANCSDQCTIVASEDNIITV-WGTRNG 742
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 198 (74.8 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 64/199 (32%), Positives = 92/199 (46%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST + FA WG GD GRLGLG+ ES P + + + CG ++ LT G
Sbjct: 454 STERELFA--WGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQA 511
Query: 93 YATGLNDFGQLGISE-NIG------------YSLEPLRISGLKKE-VVQISTGYHHSSAI 138
A G N F +LG+ ++G + PL + L +E ++ + G HS+A+
Sbjct: 512 LACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAV 571
Query: 139 T-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
T G+ Y +G N A +V P +V+ L GI A G +VA+ G+
Sbjct: 572 TXASGDCYTFGSN----------ARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGE 621
Query: 198 VLSWGAGGSGRLGHGQESS 216
V SWG G GRLG E +
Sbjct: 622 VFSWGKGARGRLGRKDEDA 640
Score = 174 (66.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 69/257 (26%), Positives = 114/257 (44%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 361 GALLPGAIEQP-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLG 419
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
S +P + L E+VQ++ G H A++ + EL+ WG+ G+LGLG + +
Sbjct: 420 HGSLNDIS-QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH 478
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSIL 218
P V G ++ G + S+ +T G+ L+ G+ +LG G+E +
Sbjct: 479 CCP--QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPH 536
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRA--VDKMLFQ-E 274
+ +TP L+ + G HSA + +G Y FG A V + + +
Sbjct: 537 QQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQ 596
Query: 275 GNHARRPSLISGGELYT 291
G + S ++ G+ +T
Sbjct: 597 GLQGIKISTVACGDAFT 613
Score = 152 (58.6 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 54/224 (24%), Positives = 91/224 (40%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG GSL +P + A + + +ACG +H L L+ ++A G D G+
Sbjct: 410 FGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGR 469
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + L +E ++ G S +TV G+ G N +LGL +
Sbjct: 470 LGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSL 529
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P + + FT + +Q ++ L + G + R
Sbjct: 530 GEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVD---LGTAHSAAVTXASGDCYTFGSNAR 586
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
S P ++ L+G+K+ A G + I G V+ +G A
Sbjct: 587 RVSR-APCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGA 629
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L G + T+GS NGCLG GS++ + P V+ V QV+CG H A+S E ++
Sbjct: 401 LTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMV-QVACGASHVLALSTEREL 459
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
WG G GG+LG G + P +V +A +V CG +
Sbjct: 460 FAWGRG------------DGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGID 500
Score = 47 (21.6 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 287 GELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSESPVDQVSC 328
GE+++WG G LG D L P ++ + V VSC
Sbjct: 620 GEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYT-VTSVSC 661
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 194 (73.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 67/235 (28%), Positives = 103/235 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG LG +S+ R + + LA G H + LT TG VY G Q
Sbjct: 198 WGTFRCSDGVLGYSDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQ 257
Query: 103 LGISENIGYSLEPLRISGLK------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LG LE R+ GL K ++ + G +HS AI G +Y WG N Q G
Sbjct: 258 LGRR-----MLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCG 312
Query: 157 L---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--- 210
+ ++ VI PT V+ L G K G ++A+ G+VL+WG +LG
Sbjct: 313 IEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPD 372
Query: 211 HGQESSILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ +++ + + Y TP +I L V +++ G H+ + +G+VY +G
Sbjct: 373 NALPETVVKDEKGNNYYLSTPTIIPGLTNV-IQVVC-GTHHNLAVTSDGKVYSWG 425
Score = 182 (69.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 62/224 (27%), Positives = 98/224 (43%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGNG +LG LE R + + ++ ++ G H+ + G VYA GLN
Sbjct: 250 WGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITR 309
Query: 102 QLGIS---ENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
Q GI E G + +P + L+ V I+ G HH+ A+ DG + WG++ QLG
Sbjct: 310 QCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLG 369
Query: 157 LGKKAAK------------VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ A + PT + L+ + Q G ++AVT GKV SWG+
Sbjct: 370 IPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVI--QVVCGTHHNLAVTSDGKVYSWGSA 427
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLI--KELEGVKVKIAAAG 246
+ +G G + P L+ K ++ V +++A AG
Sbjct: 428 ENYEVGQGDNDEDVA--------VPTLVRSKAIKEVAIRVAGAG 463
Score = 168 (64.2 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 57/193 (29%), Positives = 89/193 (46%)
Query: 78 CGGAHTLFLTETGCVYATGL---NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
C T +T+ GC + G +D G LG S++ + EP ++ E+ Q++TG H
Sbjct: 181 CSDNLTAAITDNGCCFTWGTFRCSD-GVLGYSDSQKRTAEPTQMR--LPEICQLATGTDH 237
Query: 135 SSAITVDGELYMWGKNSNGQLG---LGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSV 190
A+T G++Y WG QLG L ++ + + P P L I + A G S
Sbjct: 238 IIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL---ALKNIISVGA--GSYHSF 292
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ G+V +WG + + G E G + + P L+ LEG VK G H+
Sbjct: 293 AIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITK----PTLVDALEGYNVKSITGGEHHT 348
Query: 251 ACIDENGRVYIFG 263
+ E+GRV +G
Sbjct: 349 LALLEDGRVLAWG 361
Score = 166 (63.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 79/282 (28%), Positives = 125/282 (44%)
Query: 42 LWGNGDYGRLGLGSLESR--WRPVV--CSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
++G+G LG+G E +RP + + +K + LA GG H+ L+ G VY G+
Sbjct: 75 VFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGV 134
Query: 98 NDFGQLGI------SEN---IGYSL---EPLRISGLKKE--VVQISTGYHHSSAITVDGE 143
ND LG EN + L P ++ G V ++ + ++AIT +G
Sbjct: 135 NDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGC 194
Query: 144 LYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
+ WG + S+G LG + PT++ L I Q A G + +A+T GKV +W
Sbjct: 195 CFTWGTFRCSDGVLGYSDSQKRTAE-PTQMR-LPEIC--QLATGTDHIIALTTTGKVYTW 250
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G +LG R TP+ + L+ + + + A + HS ID GRVY
Sbjct: 251 GNGQQFQLGRRMLER-----RRLQGLTPQPLA-LKNI-ISVGAGSY-HSFAIDNKGRVYA 302
Query: 262 FG---DR--AVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
+G R ++ +EG +P+L+ E Y S G
Sbjct: 303 WGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGG 344
Score = 164 (62.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 46/144 (31%), Positives = 71/144 (49%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----------- 109
+P + A E +++K++ G HTL L E G V A G +D QLGI +N
Sbjct: 326 KPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKG 385
Query: 110 -GYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV-IP 166
Y L P I GL V+Q+ G HH+ A+T DG++Y WG N ++G G V +P
Sbjct: 386 NNYYLSTPTIIPGLTN-VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVP 444
Query: 167 IPTKVECLSGIFTKQAALGFEQSV 190
+ + + + + A G + S+
Sbjct: 445 TLVRSKAIKEVAIRVAGAGGQFSI 468
Score = 119 (46.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 54/197 (27%), Positives = 84/197 (42%)
Query: 87 TETGCVYATGLNDFGQLGISE---NIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVD 141
TE VY G +LG+ E ++ Y L P+ +S K VV ++ G HS+A++ D
Sbjct: 68 TERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPI-LSTDKVGVVDLAVGGMHSAALSHD 126
Query: 142 GELYMWGKNSNGQLGLGKKAAK-----------VIPIPTKVE-CLSGIFTKQAALGFEQS 189
G +Y WG N + LG K K + P+KVE LS + + +
Sbjct: 127 GRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLT 186
Query: 190 VAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
A+T G +WG G LG+ + T+E T + E+ + A G
Sbjct: 187 AAITDNGCCFTWGTFRCSDGVLGYSDSQ------KRTAEPTQMRLPEICQL-----ATGT 235
Query: 248 LHSACIDENGRVYIFGD 264
H + G+VY +G+
Sbjct: 236 DHIIALTTTGKVYTWGN 252
Score = 87 (35.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 34/123 (27%), Positives = 56/123 (45%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 340
+L + G++YTWG+ + LG ++ P + + V G H+ AI ++G+
Sbjct: 240 ALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGR 299
Query: 341 ILTWGWGGSH--GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+ WG + G ED G + VD + G NVK+ ++ G +HT A
Sbjct: 300 VYAWGLNITRQCGIEVED-EEEGAVITKPTLVDALE------GYNVKS--ITGGEHHTLA 350
Query: 399 LLE 401
LLE
Sbjct: 351 LLE 353
Score = 84 (34.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 36/121 (29%), Positives = 49/121 (40%)
Query: 287 GELYTWGSNENGCLGIGSID-----VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 340
G +Y WG N GI D V+ P V V ++ G HT A+ E G+
Sbjct: 298 GRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDA-LEGYNVKSITGGEHHTLALLEDGR 356
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+L WG H D + GN+ PTI+ NV +QV CG +H A
Sbjct: 357 VLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNV--IQVVCGTHHNLA 414
Query: 399 L 399
+
Sbjct: 415 V 415
Score = 76 (31.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 32/117 (27%), Positives = 53/117 (45%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGI--GSI-DVLHSPERVQGPFSESP--------V 323
G H +L+ G + WG ++ LGI ++ + + E+ + +P V
Sbjct: 344 GEH-HTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNV 402
Query: 324 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIV 378
QV CG H A+ S+GK+ +WG S + + ++G G ND D PT+V
Sbjct: 403 IQVVCGTHHNLAVTSDGKVYSWG--------SAENY----EVGQGDNDEDVAVPTLV 447
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 198 (74.8 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 60/188 (31%), Positives = 90/188 (47%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGNG +LG +E R + + F +K +A G H LT+ + + GLN FG
Sbjct: 245 WGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFG 304
Query: 102 QLGISENI---GYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
Q G+SE++ +P R++ L VV I+ G HHS ++ DG+LY G+ ++G
Sbjct: 305 QCGVSEDVEDGALVTKPKRLA-LPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVG 363
Query: 157 LGKK------------AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ K A+ +P+PTK+ + K A G SVAV G SWG G
Sbjct: 364 IPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF--KSVAAGSHHSVAVAQNGIAYSWGFG 421
Query: 205 GSGRLGHG 212
+ +G G
Sbjct: 422 ETYAVGLG 429
Score = 175 (66.7 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 66/234 (28%), Positives = 105/234 (44%)
Query: 43 WGNG--DYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG + G LG ++ + P F K+++ LA G H LFL E G V+A G
Sbjct: 189 WGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNG 248
Query: 99 DFGQLG--ISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
QLG + E +L+P R GL+ V I++G +H A+T D +L WG N GQ
Sbjct: 249 QQNQLGRKVMERFRLKTLDP-RPFGLR-HVKYIASGENHCFALTKDNKLVSWGLNQFGQC 306
Query: 156 GLGKKA--AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G+ + ++ P ++ + + A G S+ ++ G + S G +G +
Sbjct: 307 GVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPK 366
Query: 214 ESS---ILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFG 263
++ + + P L +L V K K AAG HS + +NG Y +G
Sbjct: 367 DNLPEYTYKDVHGKARAVP-LPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWG 419
Score = 102 (41.0 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 28/89 (31%), Positives = 44/89 (49%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+VVQ++ + S A+ +GE+Y WG + + G LG + K+ P KV S Q
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ 225
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
A G + + + G V +WG G +LG
Sbjct: 226 LAPGKDHILFLDEEGMVFAWGNGQQNQLG 254
Score = 92 (37.4 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 26/67 (38%), Positives = 31/67 (46%)
Query: 43 WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGL 97
WG G LGLG L RP + + K + A GG HTL L E V++ G
Sbjct: 51 WGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGC 110
Query: 98 NDFGQLG 104
ND G LG
Sbjct: 111 NDVGALG 117
Score = 57 (25.1 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESP-VDQVSCG 329
G+H ++ G Y+WG E +G+G D P R++ ++ + V CG
Sbjct: 402 GSH-HSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCG 457
Score = 56 (24.8 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV-----LHSPERVQG 316
FG R V K + NH +L +L +WG N+ G G+ S DV + P+R+
Sbjct: 271 FGLRHV-KYIASGENHCF--ALTKDNKLVSWGLNQFGQCGV-SEDVEDGALVTKPKRLAL 326
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWG 345
P + ++ G H+ +S+ G + + G
Sbjct: 327 P-DNVVIRSIAAGEHHSLILSQDGDLYSCG 355
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 198 (74.8 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 63/205 (30%), Positives = 92/205 (44%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGIS------ENIGYS---LEPLRISGLKKE 124
K + G H L L G +Y+ G FG LG ENI Y+ + ++ +
Sbjct: 248 KKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENI-YTPKKITTFTLNNNESR 306
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL----SGIFTK 180
+V I+ G +HS +T D E+Y +G GQLG G+ IP +++ +G K
Sbjct: 307 IVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIK 366
Query: 181 QAALG-FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
G S +T G V SWG G LGHG + Y+P+ I+ L +K
Sbjct: 367 SIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNEN---------HYSPKKIQSLSNIK 417
Query: 240 VKIAAAGFLHSACIDENGRVYIFGD 264
KI + GF H+ N +Y+FGD
Sbjct: 418 -KITS-GFKHTLAQSINNDIYVFGD 440
Score = 197 (74.4 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 59/182 (32%), Positives = 91/182 (50%)
Query: 43 WGNGDYGRLG--LGS--LESRWRPVVCSAFEKHSLKA----LACGGAHTLFLTETGCVYA 94
WGNG +G LG +GS E+ + P + F ++ ++ +ACGG H++FLT +Y
Sbjct: 269 WGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYT 328
Query: 95 TGLNDFGQLGISEN--IGYSLEPLRI-----SGLKKEVVQISTGYHHSSA-ITVDGELYM 146
G +FGQLG EN + + + P RI + ++ I G H +S IT DG +Y
Sbjct: 329 FGYGEFGQLGHGENDTLNHYI-PKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYS 387
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG N G LG G P K++ LS I K+ GF+ ++A + + +G
Sbjct: 388 WGWNDGGSLGHGTNENHYSP--KKIQSLSNI--KKITSGFKHTLAQSINNDIYVFGDNTF 443
Query: 207 GR 208
G+
Sbjct: 444 GQ 445
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 84/318 (26%), Positives = 137/318 (43%)
Query: 76 LACGGAHTLFLT-ETGCVYATGLNDFGQLGISENI------GYSLEPL-RISGLKKEVVQ 127
++ GG + T + +Y+ G + +G LGI +I + E + +I ++
Sbjct: 121 VSLGGNFIILQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFNDNIIS 180
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK---VIPI-PTKVECLSG------- 176
I +GY HS +T D +Y WG+N QLG G++ K P P++ E S
Sbjct: 181 IVSGYEHSLVVTKDDGIYGWGRNHKNQLG-GRERVKDKSSSPSSPSEDEYYSKPIKVLKE 239
Query: 177 ---IFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
IF K+ G + ++ + G + SWG G G LGHG +G + YTP+
Sbjct: 240 TDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHG-----VGSNDKENIYTPK- 293
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
KI F ++ N R VD + G H+ L + E+YT
Sbjct: 294 ---------KITT--FT----LNNNE------SRIVD--IACGGYHSM--FLTNDNEIYT 328
Query: 292 WGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSC--GWKHTAAI---SEGKILTW 344
+G E G LG G D L+ P+R++ + +++ H + ++G + +W
Sbjct: 329 FGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSW 388
Query: 345 GW--GGSHGTFSEDGHSS 360
GW GGS G + + H S
Sbjct: 389 GWNDGGSLGHGTNENHYS 406
Score = 135 (52.6 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 35/122 (28%), Positives = 69/122 (56%)
Query: 43 WGNGDYGRLGLGSLES--RWRPV-VCSAFEK---HSLKALACGG-AHTLFLTETGCVYAT 95
+G G++G+LG G ++ + P + S + + +K++ G A++ ++T G VY+
Sbjct: 329 FGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSW 388
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G ND G LG N + P +I L + +I++G+ H+ A +++ ++Y++G N+ GQ
Sbjct: 389 GWNDGGSLGHGTNENH-YSPKKIQSLSN-IKKITSGFKHTLAQSINNDIYVFGDNTFGQT 446
Query: 156 GL 157
L
Sbjct: 447 AL 448
Score = 117 (46.2 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 258 RVYIFGDRAVD---KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
R+ GD A K +F G+HA + + G +Y+WG N+ G LG G+ + +SP+++
Sbjct: 352 RIKSTGDNAAGNKIKSIFA-GDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKI 410
Query: 315 QGPFSESPVDQVSCGWKHTAAIS 337
Q S S + +++ G+KHT A S
Sbjct: 411 Q---SLSNIKKITSGFKHTLAQS 430
Score = 113 (44.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSC--GWKHTAAI-- 336
L + E+YT+G E G LG G D L+ P+R++ + +++ H +
Sbjct: 320 LTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYI 379
Query: 337 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
++G + +WGW + GG LGHG + ++ P + N+K +++ GF H
Sbjct: 380 TTDGSVYSWGW------------NDGGSLGHGTNENHYSPKKIQSLSNIK--KITSGFKH 425
Query: 396 T 396
T
Sbjct: 426 T 426
Score = 77 (32.2 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 40/180 (22%), Positives = 77/180 (42%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
P++++GLK + I +HS I + E Y WG SN V +P K++
Sbjct: 66 PIKLNGLKAK--DIFANAYHSGIINENDEFYHWGLYSN----------LVTEVPNKIKIN 113
Query: 175 SGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ +LG + T ++ S G G LG G+ + +E ++ K
Sbjct: 114 NDKKISNVSLGGNFIILQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEK 173
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG--NHARRPSLISGGELYT 291
+ + + I + G+ HS + ++ +Y +G +++ +E + + PS S E Y+
Sbjct: 174 FNDNI-ISIVS-GYEHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYS 231
Score = 52 (23.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 44 GNGDYGRLGLG-SLE----SRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATG 96
G YG LG+G S++ + EK + + ++ G H+L +T+ +Y G
Sbjct: 142 GKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFNDNIISIVSGYEHSLVVTKDDGIYGWG 201
Query: 97 LNDFGQLGISENI 109
N QLG E +
Sbjct: 202 RNHKNQLGGRERV 214
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 200 (75.5 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 69/244 (28%), Positives = 112/244 (45%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E + +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 372 GALLPGAVEQQ-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLG 430
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ +P + L E+VQ++ G H A++ + EL+ WG+ G+LGLG + +
Sbjct: 431 HG-GLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH 489
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--H---GQESSIL 218
P +V G ++ G + SV +T G+ L+ G+ +LG H G+E ++
Sbjct: 490 --SCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALH 547
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +TP L+ + G HSA + +G Y FG ++ G +A
Sbjct: 548 QQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQL----GTNA 603
Query: 279 RRPS 282
RR S
Sbjct: 604 RRVS 607
Score = 168 (64.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 70/265 (26%), Positives = 116/265 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG G L +P + A + + +ACG +H L L+ ++A G D G+
Sbjct: 421 FGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGR 480
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ +S P ++ +E ++ G S +TV G+ G N +LGL +
Sbjct: 481 LGLGTRESHSC-PQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLS 539
Query: 162 AKVIP-IPTKVE-CLSGIFTKQAA------------LGFEQSVAVTGGGKVLSWGAGGSG 207
P + +VE L+ FT + LG S AVT G ++G+ G
Sbjct: 540 LGEEPALHQQVEEALN--FTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHG 597
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG R S P ++ L+G+K+ + A G + I G VY +G A
Sbjct: 598 QLGTNA--------RRVSR-APCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGAR 648
Query: 268 DKMLFQEGNHAR-RPSLISGGELYT 291
++ ++ + A RP + + YT
Sbjct: 649 GRLGRRDEDAALPRPVQLDETQPYT 673
Score = 123 (48.4 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 42/154 (27%), Positives = 70/154 (45%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---LGKKAAKVIP--IPT 169
PLR+ L EVVQ++ G + +T G L +W G G L + P +
Sbjct: 330 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSR 389
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+E SG+ K A G + +T G ++++G+G +G LGHG G L S+ P
Sbjct: 390 FLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHG------G-LNDISQ--P 440
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+++ L G ++ A G H + ++ +G
Sbjct: 441 TIVEALLGYEMVQVACGASHVLALSTERELFAWG 474
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/113 (31%), Positives = 51/113 (45%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L G + T+GS NGCLG G ++ + P V+ V QV+CG H A+S E ++
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMV-QVACGASHVLALSTEREL 470
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
WG G GG+LG G + P V +A +V CG +
Sbjct: 471 FAWGRG------------DGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGID 511
Score = 118 (46.6 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
A ++ + G+ YT+GSN++G LG + V +P +VQG + V+CG T AI
Sbjct: 577 AHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG-LQGIKIAMVACGDAFTVAIG 635
Query: 337 SEGKILTWGWG--GSHGTFSED 356
+EG++ +WG G G G ED
Sbjct: 636 AEGEVYSWGKGARGRLGRRDED 657
Score = 58 (25.5 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 34/127 (26%), Positives = 52/127 (40%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSP---ERVQG-----PFSESPVDQ-----VSCGWKHT 333
G+ GSN LG+ + + P ++V+ P +P+DQ V G H+
Sbjct: 520 GQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHS 579
Query: 334 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDVDYIHPTIVNFGENVKALQVSCG 392
AA++ G TF + H GQLG + V P V + +K V+CG
Sbjct: 580 AAVTAS--------GDCYTFGSNQH---GQLGTNARRVSRA-PCQVQGLQGIKIAMVACG 627
Query: 393 FNHTGAL 399
T A+
Sbjct: 628 DAFTVAI 634
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 160 (61.4 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 52/162 (32%), Positives = 82/162 (50%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 12 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 69
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 70 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 129
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTG 194
L A +P+P K+E K A+ G+ VA TG
Sbjct: 130 LA---NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTG 168
Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTE G V + G N FGQLG+ + P I K++VV I+ G H+ A T G ++
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 146 MWGKNSNGQLGLGKKAA--KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
WG G G++ + +P+ P++V L G + S ++T G+
Sbjct: 62 QWG---TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 198 VLSWGAGGSGRLGH 211
V WG+ G+L +
Sbjct: 119 VYVWGSNKHGQLAN 132
Score = 123 (48.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 42/129 (32%), Positives = 58/129 (44%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T +G++ G NS GQLG+ + + +P +E AA G +VA T G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIELHKEKVVCIAA-GLRHAVAATASGI 59
Query: 198 VLSWGAG--GSGR-LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
V WG G GR L GQ L + E P + LE K AG HSA +
Sbjct: 60 VFQWGTGLASCGRRLCPGQT---LPLFFTAKE--PSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 255 ENGRVYIFG 263
+ G VY++G
Sbjct: 115 DAGEVYVWG 123
Score = 87 (35.7 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAA 335
SL GE+Y WGSN++G L L P++++ F V + GW H A
Sbjct: 112 SLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 193 (73.0 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 56/186 (30%), Positives = 89/186 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLGL + +S P S + + CG ++ ++ + A G N F +
Sbjct: 474 WGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNK 533
Query: 103 LGISENIGYS-------LEPLRISGL-------KKEVVQISTGYHHSSAITVDGELYMWG 148
LG+ + G +E + + L +++V I G HS A+T G+ + +G
Sbjct: 534 LGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFG 593
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N +GQLG + + +P +V L GI AA G ++A+ G+V +WG G GR
Sbjct: 594 SNQHGQLGCSHRRSSRVPY--QVSGLQGI--TMAACGDAFTLAIGAEGEVYTWGKGARGR 649
Query: 209 LGHGQE 214
LG +E
Sbjct: 650 LGRKEE 655
Score = 174 (66.3 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 65/244 (26%), Positives = 110/244 (45%)
Query: 54 GSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
G++E + +P S F E S +K+++CG T LT+ G + G G LG N
Sbjct: 378 GAVE-QMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHG-NF 435
Query: 110 GYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+P + L E+VQ+S G H A+T + E++ WG+ NG+LGL + + P
Sbjct: 436 NDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSH--NCP 493
Query: 169 TKVECLSGIFTKQAAL-GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI---LGFLRST 224
+V L F Q L G + S+ ++ ++L+ G +LG + S F +
Sbjct: 494 QQVS-LPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVE 552
Query: 225 SEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ +L++ L K+ G HS + E G+ + FG ++ +R P
Sbjct: 553 EVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPY 612
Query: 283 LISG 286
+SG
Sbjct: 613 QVSG 616
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 62/237 (26%), Positives = 103/237 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG G+ +P + A + L ++CG +H L +T V++ G D G+
Sbjct: 422 FGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGR 481
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG++ ++ P ++S E ++ G S ++ ++ G N +LGL K +
Sbjct: 482 LGLATQDSHNC-PQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVS 540
Query: 162 AKVIPIP-TKVECLSGIFTKQAA-----------LGFEQSVAVTGGGKVLSWGAGGSGRL 209
P +VE + Q+A +G SVAVT G+ ++G+
Sbjct: 541 GTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQ---- 596
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
HGQ LG S P + L+G+ + AA G + I G VY +G A
Sbjct: 597 -HGQ----LGCSHRRSSRVPYQVSGLQGITM--AACGDAFTLAIGAEGEVYTWGKGA 646
Score = 129 (50.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 39/153 (25%), Positives = 70/153 (45%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIP--IPTK 170
PLR+ L EV+Q+S G +T G L W S +G+ L ++ P I
Sbjct: 332 PLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRF 391
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+E SG+ K + G + +T G ++++G+G +G LGHG + + P+
Sbjct: 392 LEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVT---------QPK 442
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+++ L G ++ + G H + V+ +G
Sbjct: 443 IVEALLGYELVQVSCGASHVLAVTNEREVFSWG 475
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L G + T+GS NGCLG G+ + + P+ V+ V QVSCG H A++ E ++
Sbjct: 413 LTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELV-QVSCGASHVLAVTNEREV 471
Query: 342 LTWGWG--GSHGTFSEDGHSSGGQL 364
+WG G G G ++D H+ Q+
Sbjct: 472 FSWGRGDNGRLGLATQDSHNCPQQV 496
Score = 97 (39.2 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
+K+++ + A ++ G+ +T+GSN++G LG P +V G + +
Sbjct: 568 EKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGL---QGITMAA 624
Query: 328 CGWKHTAAI-SEGKILTWGWG--GSHGTFSED 356
CG T AI +EG++ TWG G G G ED
Sbjct: 625 CGDAFTLAIGAEGEVYTWGKGARGRLGRKEED 656
Score = 75 (31.5 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 345
E+++WG +NG LG+ + D + P++V P ++ +V CG + +S + +IL G
Sbjct: 470 EVFSWGRGDNGRLGLATQDSHNCPQQVSLP-ADFEAQRVLCGVDCSMIMSTQHQILACG 527
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 182 (69.1 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 61/224 (27%), Positives = 101/224 (45%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHHS 135
+C AH+L +T G +++ G N+ GQLG + P I L E + ++ G +H+
Sbjct: 155 SCA-AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA-PRLIEALSHEAIVLAACGRNHT 212
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+T G ++ +G+N GQLGLG + +P P ++ TK A G E S+ +
Sbjct: 213 LALTDTGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYNGQPITKMAC-GAEFSMLMDCK 270
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTS---EYTPRLI-----KELEG-------VKV 240
G + S+G G+LGH + + + E PR + K +G V V
Sbjct: 271 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 330
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
+ A G H+ +D RV+ +G ++ E P L+
Sbjct: 331 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV 374
Score = 172 (65.6 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 60/237 (25%), Positives = 96/237 (40%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G + P + A ++ ACG HTL LT+TG V+A G N GQ
Sbjct: 172 WGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ 231
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ P +I + + +++ G S + G LY +G GQLG
Sbjct: 232 LGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDG- 290
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQS----VAVTGGGKVLSWGAGGSGRLGHGQESSI- 217
K I ++E + ++ A+ E++ + V G + L + +
Sbjct: 291 KFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVF 350
Query: 218 ---------LGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
LG E PRL+K + G AG+ S + E G ++ +G
Sbjct: 351 SWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 407
Score = 153 (58.9 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 50/160 (31%), Positives = 75/160 (46%)
Query: 108 NIGYSL-EPLR---ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
N+G +L P R +SG++ V + HS IT +G+L+ WG+N GQLG G K
Sbjct: 129 NLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD--TK 186
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+ P +E LS AA G ++A+T G V ++G G+LG G ++ +
Sbjct: 187 RVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVP---- 242
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+P I G + A G S +D G +Y FG
Sbjct: 243 ----SPAQIM-YNGQPITKMACGAEFSMLMDCKGNLYSFG 277
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 50/189 (26%), Positives = 83/189 (43%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL-RISGLK-KEVVQIST 130
++ +ACG HTL L V++ G +G+LG +E + L ++ + QI
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYA 389
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
GY S A++ G L+ WG + + + P V+ L G + A G + S+
Sbjct: 390 GYTCSFAVSEVGGLFFWGATNTSR--------ESTMYPKAVQDLCGWRIRSLACG-KSSI 440
Query: 191 AVTGGGKVLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
V +SWG + G LG+G + S + +K L+G+ + A G+ H
Sbjct: 441 IVAADESTISWGPSPTFGELGYGDH-------KPKSSTAAQEVKTLDGIFSEQVAMGYSH 493
Query: 250 SACI--DEN 256
S I DE+
Sbjct: 494 SLVIARDES 502
Score = 73 (30.8 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 24/88 (27%), Positives = 39/88 (44%)
Query: 317 PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
P V V+CG HT + S+ ++ +WG+GG G+LGH D + P
Sbjct: 324 PVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGY------------GRLGHAEQKDEMVP 371
Query: 376 TIVNFGE--NVKALQVSCGFNHTGALLE 401
+V + A Q+ G+ + A+ E
Sbjct: 372 RLVKLFDFPGRGATQIYAGYTCSFAVSE 399
Score = 50 (22.7 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 328 CGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CGW+ + A + I+ T S + G+LG+G D+ P + VK
Sbjct: 426 CGWRIRSLACGKSSIIV---AADESTISWGPSPTFGELGYG---DH-KPKSSTAAQEVKT 478
Query: 387 L------QVSCGFNHT 396
L QV+ G++H+
Sbjct: 479 LDGIFSEQVAMGYSHS 494
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 187 (70.9 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 58/202 (28%), Positives = 96/202 (47%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ CG HTL LT G +Y+ G N+ QLGI ++ +L+P+ ++ L + + G +
Sbjct: 1177 AIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQY 1235
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H++A+ DG+LYMWG GQLG G + + I P V Q +LG ++ +
Sbjct: 1236 HNAAVA-DGKLYMWGWGIYGQLGQG--SCENIATPQLVSFFKFKKILQISLGHAHTLVLC 1292
Query: 194 G-----------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP-RLIKELEGVKVK 241
G G ++ +G+ G+LG G G T P RL E+ ++
Sbjct: 1293 GAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDH--G---DTKTNLPVRL--EVGDCSLR 1345
Query: 242 IAAAGFLHSACIDENGRVYIFG 263
+ F + +DE R++ +G
Sbjct: 1346 LIHTKFFTNLAVDEQDRLFTWG 1367
Score = 59 (25.8 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 23/77 (29%), Positives = 31/77 (40%)
Query: 283 LISGG-ELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
LIS LYTWG N LG D + P + E P+ V CG T ++
Sbjct: 1515 LISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDS--IERPM-YVDCGSDFTLVMTTD 1571
Query: 340 KILTWGWGGSHGTFSED 356
++ G S+G D
Sbjct: 1572 HVVRAFGGNSNGQCGRD 1588
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 166 (63.5 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 58/168 (34%), Positives = 87/168 (51%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMW 147
G VYATG N+ GQLG+ + S L IS + + Q+S G + S+A+T +GELY +
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHL-ISFFTSQHKIKQLSAGSNTSAALTAEGELYTF 61
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGG 205
G+ +G+LGL K +P + + GI K Q A G +V +T V ++G G
Sbjct: 62 GEPESGKLGLPPKLLVNHKVP---QLVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQ 117
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+LG G F TSE P++I+ ++ K+ G H+A I
Sbjct: 118 FGQLGLGT------FTFETSE--PKVIESVKDKKISHVCCGENHTALI 157
Score = 142 (55.0 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 38/120 (31%), Positives = 65/120 (54%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLND 99
A GN + G+LGLG + R + S F +H +K L+ G + LT G +Y G +
Sbjct: 7 ATGGNNE-GQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGEPE 65
Query: 100 FGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG+ + + + P + G+ ++V+Q++ G H+ +T + +Y +G GQLGLG
Sbjct: 66 SGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLG 124
Score = 130 (50.8 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 282 SLISGGELYTWGSNENGCLGIG-SIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEG 339
+L + GELYT+G E+G LG+ + V H P+ V G SE + QV+CG HT ++E
Sbjct: 51 ALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPG-ISEKVI-QVACGGGHTVVLTEK 108
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G F GQLG G + P ++ ++ K V CG NHT
Sbjct: 109 AVYTFGLG----QF--------GQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTAL 156
Query: 399 L 399
+
Sbjct: 157 I 157
Score = 104 (41.7 bits), Expect = 0.00094, P = 0.00094
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
GG++Y G N G LG+G D + + S+ + Q+S G +AA++ EG++ T+
Sbjct: 2 GGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTF 61
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGALLE 401
G G+LG + H P +V G + K +QV+CG HT L E
Sbjct: 62 G------------EPESGKLGLPPKLLVNHKVPQLVP-GISEKVIQVACGGGHTVVLTE 107
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTE G V + G N FGQLG+ + P I K++VV I+ G H+ A T G ++
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 146 MWGKNSNGQLGLGKKAA--KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
WG G G++ + +P+ P++V L G + S ++T G+
Sbjct: 62 QWG---TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 198 VLSWGAGGSGRLGH 211
V WG+ G+L +
Sbjct: 119 VYVWGSNKHGQLAN 132
Score = 136 (52.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 40/121 (33%), Positives = 65/121 (53%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 12 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 69
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 70 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 129
Query: 155 L 155
L
Sbjct: 130 L 130
Score = 123 (48.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 42/129 (32%), Positives = 58/129 (44%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T +G++ G NS GQLG+ + + +P +E AA G +VA T G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIELHKEKVVCIAA-GLRHAVAATASGI 59
Query: 198 VLSWGAG--GSGR-LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
V WG G GR L GQ L + E P + LE K AG HSA +
Sbjct: 60 VFQWGTGLASCGRRLCPGQT---LPLFFTAKE--PSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 255 ENGRVYIFG 263
+ G VY++G
Sbjct: 115 DAGEVYVWG 123
Score = 62 (26.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 282 SLISGGELYTWGSNENGCL 300
SL GE+Y WGSN++G L
Sbjct: 112 SLTDAGEVYVWGSNKHGQL 130
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 148 (57.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGYHH 134
+A GG HT+ + + G V++ G N+FGQ G+ G SL ++ G + + IS G+
Sbjct: 48 IAGGGNHTMVILDNGEVFSCGSNEFGQCGLPR--GESLGVFHKVPG--NDWLDISCGWEF 103
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S + GE+Y+ G+ G+LGLGK+ + I + + G K+ + ++ T
Sbjct: 104 SILVKRSGEVYVCGRGLKGELGLGKETPESELIYSTT--VDGF--KEIKSCMQHTIIQTT 159
Query: 195 GGKVLSWGAGGSGRLGHGQE 214
G V WG G+LG ++
Sbjct: 160 NGLV-GWGNSRKGQLGETED 178
Score = 98 (39.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 36/134 (26%), Positives = 64/134 (47%)
Query: 93 YATGLN-DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
Y G+N D Q + + + ++ S + + ++I+ G +H+ I +GE++ G N
Sbjct: 13 YQLGINNDEDQNSLKVTL-FDIDGTMSSEVPGKPMKIAGGGNHTMVILDNGEVFSCGSNE 71
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQ GL + + + + KV G + G+E S+ V G+V G G G LG
Sbjct: 72 FGQCGLPR--GESLGVFHKVP---GNDWLDISCGWEFSILVKRSGEVYVCGRGLKGELGL 126
Query: 212 GQESSILGFLRSTS 225
G+E+ + ST+
Sbjct: 127 GKETPESELIYSTT 140
Score = 75 (31.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 37/147 (25%), Positives = 60/147 (40%)
Query: 206 SGRLGHGQE-SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+G +G G LG +TP+ ++ GV K + G +A + RV IFG
Sbjct: 160 NGLVGWGNSRKGQLGETEDKIMWTPKTLRF--GVVCKDFSLGREFTAIQTDTNRVKIFGK 217
Query: 265 RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
++ + E AR ++ S + + +N G S D L P S V+
Sbjct: 218 SSIKNI--PESTVARVAAMWSSVHILS-ETNVLQSFGNNSHDQLF-PNN-----SSVAVE 268
Query: 325 QVSCGWKHTAAISEGKILTWGWGGSHG 351
+ + G +H S+ + WGW HG
Sbjct: 269 EYAIGSEHGLVTSDNIVYAWGWS-EHG 294
Score = 37 (18.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 289 LYTWGSNENGCLG 301
+Y WG +E+G G
Sbjct: 285 VYAWGWSEHGNCG 297
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 148 (57.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGYHH 134
+A GG HT+ + + G V++ G N+FGQ G+ G SL ++ G + + IS G+
Sbjct: 48 IAGGGNHTMVILDNGEVFSCGSNEFGQCGLPR--GESLGVFHKVPG--NDWLDISCGWEF 103
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S + GE+Y+ G+ G+LGLGK+ + I + + G K+ + ++ T
Sbjct: 104 SILVKRSGEVYVCGRGLKGELGLGKETPESELIYSTT--VDGF--KEIKSCMQHTIIQTT 159
Query: 195 GGKVLSWGAGGSGRLGHGQE 214
G V WG G+LG ++
Sbjct: 160 NGLV-GWGNSRKGQLGETED 178
Score = 98 (39.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 36/134 (26%), Positives = 64/134 (47%)
Query: 93 YATGLN-DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
Y G+N D Q + + + ++ S + + ++I+ G +H+ I +GE++ G N
Sbjct: 13 YQLGINNDEDQNSLKVTL-FDIDGTMSSEVPGKPMKIAGGGNHTMVILDNGEVFSCGSNE 71
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQ GL + + + + KV G + G+E S+ V G+V G G G LG
Sbjct: 72 FGQCGLPR--GESLGVFHKVP---GNDWLDISCGWEFSILVKRSGEVYVCGRGLKGELGL 126
Query: 212 GQESSILGFLRSTS 225
G+E+ + ST+
Sbjct: 127 GKETPESELIYSTT 140
Score = 75 (31.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 37/147 (25%), Positives = 60/147 (40%)
Query: 206 SGRLGHGQE-SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+G +G G LG +TP+ ++ GV K + G +A + RV IFG
Sbjct: 160 NGLVGWGNSRKGQLGETEDKIMWTPKTLRF--GVVCKDFSLGREFTAIQTDTNRVKIFGK 217
Query: 265 RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
++ + E AR ++ S + + +N G S D L P S V+
Sbjct: 218 SSIKNI--PESTVARVAAMWSSVHILS-ETNVLQSFGNNSHDQLF-PNN-----SSVAVE 268
Query: 325 QVSCGWKHTAAISEGKILTWGWGGSHG 351
+ + G +H S+ + WGW HG
Sbjct: 269 EYAIGSEHGLVTSDNIVYAWGWS-EHG 294
Score = 37 (18.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 289 LYTWGSNENGCLG 301
+Y WG +E+G G
Sbjct: 285 VYAWGWSEHGNCG 297
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 185 (70.2 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 74/266 (27%), Positives = 120/266 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLNDF 100
WGN LG G +S+ P + F ++S +K + H++FL+ G +Y G
Sbjct: 150 WGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGHGQG 209
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL + QI+ H+ +T DG +Y +G N+ QLG+
Sbjct: 210 GRLGHGDE-QTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQLGILP 268
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A +P + + L G A G +V T V + G G G+LG+ + +
Sbjct: 269 PPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEA-VYTMGLNG-GQLGYLLDPN-- 324
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G T+ PR + L + V V + +A + C+ E G +Y+ D K+ ++ N
Sbjct: 325 GEKCVTA---PRQVSALHHKDVSVSLVSASDGATVCVTERGDIYLLADYQCKKIASKQLN 381
Query: 277 HARRPSLISGGEL-Y---TWGSNENG 298
+ L++GG L Y T ENG
Sbjct: 382 --LKKVLVNGGYLEYKVDTQHLKENG 405
Score = 145 (56.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/121 (33%), Positives = 59/121 (48%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y WG N N LG G + +K P + + ++ KQ L SV ++ G++ + G
Sbjct: 146 EVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCG 205
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L + AA H+ + E+G VY F
Sbjct: 206 HGQGGRLGHGDEQTCL---------VPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTF 256
Query: 263 G 263
G
Sbjct: 257 G 257
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 148 (57.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 49/158 (31%), Positives = 73/158 (46%)
Query: 59 RWRPVVCSAF-EKHSLKA----LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
RW+ CS EK L A G H L L E G VY+ G + + L
Sbjct: 15 RWQGYFCSVSPEKLLLSRPVLHAALGSLHGLLLIEGGQVYSFGEQPWKPVE-PPPASLVL 73
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
E +SG + V+ +S G +H SA+T DG + MWG+NS GQ G+ +P PT V
Sbjct: 74 EST-LSG--QHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVS--GTDRVPSPTPVTV 128
Query: 174 LSG-------IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + A G + ++A++ +V +WG+G
Sbjct: 129 VDDETHPPQLVRVLNVACGAQHTLALSNKHEVWAWGSG 166
Score = 127 (49.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKN 150
V++ G GQLG + + L+PL I L KKEVV+I+ G +HS A+T ++Y WG
Sbjct: 522 VWSWGKGHEGQLGHGDYLP-RLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSE 580
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
GQLG + +P T V GI A G ++ + G
Sbjct: 581 KFGQLGR-MNSPSTVPNLTTVS--DGIRVWDVAAGQTHTLLLADG 622
Score = 112 (44.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 39/128 (30%), Positives = 60/128 (46%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE--------VV 126
+++ G H +TE G V G N +GQ G+S P ++ + E V+
Sbjct: 84 SVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVP-SPTPVTVVDDETHPPQLVRVL 142
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSGIFTKQAAL 184
++ G H+ A++ E++ WG S QLGL V P+ P KVE L G + Q A
Sbjct: 143 NVACGAQHTLALSNKHEVWAWG--SGCQLGL---VTNVFPVWKPQKVEHLVGRYVVQIAC 197
Query: 185 GFEQSVAV 192
G S+A+
Sbjct: 198 GAFHSLAL 205
Score = 108 (43.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 42/144 (29%), Positives = 65/144 (45%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
R S L+ V+ ST + ++ E++ WGK GQLG G ++ P+ K LS
Sbjct: 497 RTSNLR--AVRASTSESRNLLPSLFTEVWSWGKGHEGQLGHGDYLPRLQPLCIK--SLSK 552
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ G S+A+T +V SWG+ G+LG + S S P L +
Sbjct: 553 KEVVKITAGANHSLALTAQCQVYSWGSEKFGQLGR---------MNSPST-VPNLTTVSD 602
Query: 237 GVKVKIAAAGFLHSACIDENGRVY 260
G++V AAG H+ + + G Y
Sbjct: 603 GIRVWDVAAGQTHTLLLAD-GDCY 625
Score = 100 (40.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 35/115 (30%), Positives = 53/115 (46%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLES--RWRPVVCSAFEKHS---LKAL--ACGGAHTL 84
S+ + +WG YG+ G+ + PV E H ++ L ACG HTL
Sbjct: 93 SAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTL 152
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
L+ V+A G QLG+ N+ +P ++ L + VVQI+ G HS A+
Sbjct: 153 ALSNKHEVWAWGSGC--QLGLVTNVFPVWKPQKVEHLVGRYVVQIACGAFHSLAL 205
Score = 87 (35.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 30/116 (25%), Positives = 51/116 (43%)
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
PSL + E+++WG G LG G P ++ S+ V +++ G H+ A++ +
Sbjct: 516 PSLFT--EVWSWGKGHEGQLGHGDYLPRLQPLCIKS-LSKKEVVKITAGANHSLALT-AQ 571
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
+ WG SE GQLG N + P + + ++ V+ G HT
Sbjct: 572 CQVYSWG------SE----KFGQLGRMNSPSTV-PNLTTVSDGIRVWDVAAGQTHT 616
Score = 72 (30.4 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V SWG G G+LGHG +L P IK L +V AG HS +
Sbjct: 521 EVWSWGKGHEGQLGHGD------YL---PRLQPLCIKSLSKKEVVKITAGANHSLALTAQ 571
Query: 257 GRVYIFG 263
+VY +G
Sbjct: 572 CQVYSWG 578
Score = 70 (29.7 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
W WG GH GQLGHG+ + + P + + ++++ G NH+ AL
Sbjct: 523 WSWG--------KGHE--GQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLAL 568
Score = 55 (24.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP---VDQVSCGWKH 332
NH+ +L + ++Y+WGS + G LG ++SP V + S V V+ G H
Sbjct: 563 NHSL--ALTAQCQVYSWGSEKFGQLGR-----MNSPSTVPNLTTVSDGIRVWDVAAGQTH 615
Query: 333 TAAISEG 339
T +++G
Sbjct: 616 TLLLADG 622
Score = 50 (22.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 43 WGNGDYGRLGL-GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
WG+G +LGL ++ W+P + +ACG H+L L +
Sbjct: 163 WGSGC--QLGLVTNVFPVWKPQKVEHLVGRYVVQIACGAFHSLALVQ 207
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 130 (50.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 67/232 (28%), Positives = 100/232 (43%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVI---PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+Y +G S G+LG G +V PI + + A +G VAV G V
Sbjct: 136 VYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPETEVVGLSACMG--HVVAVLSNGDVYG 193
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDE--N 256
WG G G+LG + G + PR ++EGV K+A A G + + E +
Sbjct: 194 WGNGRKGQLGAPE-----GIITE-----PR---KIEGVPFKVAKAACGKEFTCLVGEPGS 240
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGG-ELY-TWGSNENGCLGIGSIDVLHSPERV 314
G + + G +DK Q P+ + G +L +WG N GSI +
Sbjct: 241 GDILVMG---LDKWSVQSS----APNSVPGWRDLQASWG-NIYVLQADGSILSWGRNDHG 292
Query: 315 QGPFSESP-VDQVSCGWKHTAAISEGK--ILTWGWG--GSHGTFSEDGHSSG 361
Q SE P + Q++ G +H AI E + + WGWG G+ G +D +S G
Sbjct: 293 QLAPSELPKMSQIAVGSEHVVAIDEARQSVAAWGWGEHGNCGPQVQDDNSQG 344
Score = 91 (37.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 34/116 (29%), Positives = 52/116 (44%)
Query: 92 VYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
VY+ G G+LG + + ++ + EVV +S H A+ +G++Y WG
Sbjct: 136 VYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPETEVVGLSACMGHVVAVLSNGDVYGWG 195
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV--TGGGKVLSWG 202
GQLG + +I P K+E + K AA G E + V G G +L G
Sbjct: 196 NGRKGQLGAPEG---IITEPRKIEGVPFKVAK-AACGKEFTCLVGEPGSGDILVMG 247
Score = 90 (36.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 93 YATGLNDFGQLGISENIGYSL-EPLRISGLKKE--------VVQISTGYHHSSAITVDGE 143
+A G N GQLGI S+ +P S E VVQ++ G +H+ +T DGE
Sbjct: 5 FALGSNGSGQLGIGHKEDISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQDGE 64
Query: 144 LYMWGKNSNGQLGLGKKAA 162
+Y G ++G GL A
Sbjct: 65 IYSSGDPASGACGLKSATA 83
Score = 76 (31.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 47/184 (25%), Positives = 72/184 (39%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V S+G G G LG G + F + + + P E E V + A G H + N
Sbjct: 135 RVYSFGCGSKGELGQGPLIIRVPFAQPIANFPP---PETEVVGLS-ACMG--HVVAVLSN 188
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGS---NENGCL----GIGSIDVLH 309
G VY +G+ ++ EG P I G + E CL G G I V+
Sbjct: 189 GDVYGWGNGRKGQLGAPEGI-ITEPRKIEGVPFKVAKAACGKEFTCLVGEPGSGDILVMG 247
Query: 310 SPE-RVQG--PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ VQ P S + W + + ++G IL+WG HG + Q+
Sbjct: 248 LDKWSVQSSAPNSVPGWRDLQASWGNIYVLQADGSILSWG-RNDHGQLAPSELPKMSQIA 306
Query: 366 HGND 369
G++
Sbjct: 307 VGSE 310
Score = 74 (31.1 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 39 FA-ALWGNGDYGRLGLGSLE--SRWRPVV-------CSAFEKHSLKALACGGAHTLFLTE 88
FA AL NG G+LG+G E S +P + SA + +A GG HTL LT+
Sbjct: 3 FAFALGSNGS-GQLGIGHKEDISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQ 61
Query: 89 TGCVYATGLNDFGQLGI 105
G +Y++G G G+
Sbjct: 62 DGEIYSSGDPASGACGL 78
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 153 (58.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 62/211 (29%), Positives = 95/211 (45%)
Query: 50 RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
R G S+ P +C K L+A A G H L LTE G VY+ G + + G E
Sbjct: 24 RAGSCSVTPERLPGLCG---KTVLQA-ALGTNHGLLLTEGGEVYSFGKLPW-RSGPEEFC 78
Query: 110 GYSLEP-LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
S P L + L + V+ ++ G H+ A+T G +YMWG NS+GQ + + P P
Sbjct: 79 ANS--PILENTLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQP 136
Query: 169 TKVEC-----LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+ L + Q A G E ++A++ ++ +WG+G LG + +
Sbjct: 137 ISISDSETSPLLSVRVLQLACGEEHTLALSLSREIWAWGSGCQ-----------LGLITT 185
Query: 224 TSEYT-PRLIKELEGVKVKIAAAGFLHSACI 253
T T P+ ++ L G V A G HS +
Sbjct: 186 TFPVTKPQKVEHLAGRVVLQIACGAYHSLAL 216
Score = 143 (55.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 47/152 (30%), Positives = 72/152 (47%)
Query: 46 GDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC-----GGAHTLFLTETGCVYATGLNDF 100
G RL L L S+ P + + ++ +A G A L + V++ G
Sbjct: 472 GGSRRLSLPGLLSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKD 531
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + + L+PL + L KEV+Q+S G HHS A+T ++Y WG N GQLG
Sbjct: 532 GQLGHGDVLP-RLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLG-HT 589
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ +P KV C G+++ A + +A
Sbjct: 590 NSPTTVPRLAKV-CGDGVWSTAAGSDYSLFLA 620
Score = 80 (33.2 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
PSL + E+++WG ++G LG G + P V+ V Q+S G H+ A++ K
Sbjct: 517 PSLRT--EVWSWGRGKDGQLGHGDVLPRLQPLCVKS-LDGKEVIQLSAGGHHSLALT-AK 572
Query: 341 ILTWGWGGSHGTFSEDGHSS 360
+ WG + F + GH++
Sbjct: 573 SQVYSWGSN--IFGQLGHTN 590
Score = 71 (30.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G GQLGHG+ + + P V + + +Q+S G +H+ AL
Sbjct: 527 GRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLAL 569
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 152 (58.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQI 128
K L+A A G H + LTE G VY+ G + S I S PL S L V+ +
Sbjct: 41 KTVLQA-ALGVRHGVLLTEDGEVYSFGTLPWKSE--SAEICPS-SPLLESALVGHHVITV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---ECLSGIFTK--QAA 183
+TG HS A+T G +YMWG+N+ GQ + + P P + E + + Q A
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLA 156
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKI 242
G E ++A++ ++ +WG G LG + +T T P+ ++ L G V
Sbjct: 157 CGEEHTLALSLSREIWAWGTGCQ-----------LGLITTTFPVTKPQKVEHLAGRVVLQ 205
Query: 243 AAAGFLHSACI 253
A G HS +
Sbjct: 206 VACGAFHSLAL 216
Score = 140 (54.3 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 45/139 (32%), Positives = 68/139 (48%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-- 119
P++ SA H + +A G H+ +TE+G VY G N GQ ++ N Y EP +S
Sbjct: 82 PLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVA-NQQYVPEPSPVSIS 140
Query: 120 ------GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++Q++ G H+ A+++ E++ WG QLGL V P KVE
Sbjct: 141 DSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 131 (51.2 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 38/114 (33%), Positives = 57/114 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG+H+L LT VY+ G N FGQ
Sbjct: 525 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQ 584
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG SE + R+S + E V ++ G +S + VD E + G +G+
Sbjct: 585 LGHSE---FPTTVPRLSKVSSENGVWSVAAGQDYSLFL-VDTEDFQPGLYYSGR 634
Score = 93 (37.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 34/118 (28%), Positives = 50/118 (42%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++ G QAALG V +T G+V S+G L ES+ +
Sbjct: 32 PERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFGT-----LPWKSESAEI------CPS 80
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+P L L G V A G HS + E+G VY++G+ A + + PS +S
Sbjct: 81 SPLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVS 138
Score = 81 (33.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
PSL + E++TWG + G LG G + P V+ V + G H+ A++ K
Sbjct: 516 PSLRT--EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGSHSLALT-AK 571
Query: 341 ILTWGWGGSHGTFSEDGHS 359
+ WG + TF + GHS
Sbjct: 572 SQVYSWGSN--TFGQLGHS 588
Score = 60 (26.2 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G GQLGHG+ + + P V + + + + G +H+ AL
Sbjct: 526 GKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
Score = 55 (24.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
G+H+ +L + ++Y+WGSN G LG + R+ SE+ V V+ G
Sbjct: 562 GSHSL--ALTAKSQVYSWGSNTFGQLGHSEFPT--TVPRLSKVSSENGVWSVAAG 612
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
GGS RL S+ G L S+ +PRL+++ VK +
Sbjct: 471 GGSRRL------SLPGLL---SQVSPRLLRKAARVKTR 499
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 151 (58.2 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQI 128
K L+A A G H + LTE G VY+ G + + +E S PL S L VV +
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPW-KSEAAEICPSS--PLLESALVGHHVVTV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-----LSGIFTKQAA 183
+TG HS A+T G +YMWG+N+ GQ + + P P + L + Q A
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLA 156
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKI 242
G E ++A++ ++ +WG G LG + +T T P+ ++ L G V
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQ-----------LGLITTTFPVTKPQKVEHLAGRVVLQ 205
Query: 243 AAAGFLHSACI 253
A G HS +
Sbjct: 206 VACGAFHSLAL 216
Score = 141 (54.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 45/139 (32%), Positives = 68/139 (48%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P++ SA H + +A G H+ +TE+G VY G N GQ ++ N Y EP +S
Sbjct: 82 PLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVA-NQQYVSEPSPVSIS 140
Query: 122 KKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
E ++Q++ G H+ A+++ E++ WG QLGL V P KVE
Sbjct: 141 DSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 39/114 (34%), Positives = 56/114 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG+H+L LT VY+ G N FGQ
Sbjct: 525 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQ 584
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG SE + R+S + E V ++ G H S VD E + G +G+
Sbjct: 585 LGHSE---FPTTVPRLSKVSSESGVWSVAAG-HGYSLFLVDTEDFQPGLYYSGR 634
Score = 131 (51.2 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKN 150
V+ G GQLG + + L+PL + L KEV+ + G HS A+T ++Y WG N
Sbjct: 522 VWTWGKGKEGQLGHGDVLP-RLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ GQLG + +P +KV SG+++ A G+ + T + G SGR
Sbjct: 581 TFGQLG-HSEFPTTVPRLSKVSSESGVWSVAAGHGYSLFLVDT---EDFQPGLYYSGRQD 636
Query: 211 HGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYI 261
+ ++ T+ TP L+ + G ++ A + A +D+N YI
Sbjct: 637 RAEGDTLPENPSGTT--TPVLLSCSKLGYISRVTAGKDSYLALVDKNIMGYI 686
Score = 93 (37.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 33/118 (27%), Positives = 51/118 (43%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++ G QAALG + V +T G+V S+G L E++ +
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWKSEAAEI------CPS 80
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+P L L G V A G HS + E+G VY++G+ A + + PS +S
Sbjct: 81 SPLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVS 138
Score = 81 (33.6 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
PSL + E++TWG + G LG G + P V+ V + G H+ A++ K
Sbjct: 516 PSLRT--EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGSHSLALT-AK 571
Query: 341 ILTWGWGGSHGTFSEDGHS 359
+ WG + TF + GHS
Sbjct: 572 SQVYSWGSN--TFGQLGHS 588
Score = 60 (26.2 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G GQLGHG+ + + P V + + + + G +H+ AL
Sbjct: 526 GKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
Score = 58 (25.5 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
G+H+ +L + ++Y+WGSN G LG + R+ SES V V+ G
Sbjct: 562 GSHSL--ALTAKSQVYSWGSNTFGQLGHSEFPT--TVPRLSKVSSESGVWSVAAG 612
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 178 (67.7 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 83/340 (24%), Positives = 143/340 (42%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG-LNDF 100
WG+ + +L ++ S +P+ +K+++CGG + + E G +Y G L +
Sbjct: 58 WGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVWGTLIEG 117
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-------ELYMWGKNSNG 153
G+ +E+ P ++ L K V +S G +H A+ D +Y WG N G
Sbjct: 118 GKC--TES------PTKVD-LLKGVTCVSIGINHC-AVVADSPTTPEKRSVYTWGTNRKG 167
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG+ + P +V S + G E + A+ G +V WG S ++
Sbjct: 168 QLGV--VGDSITNAPRRVTLGSKAIS--VCCGEEFTAAIVEGNEVFVWGYNKSRQICSNN 223
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI-DENGRVYIFGD-RAVD--- 268
I+ + R I EL K IAA + + C+ N +V GD + ++
Sbjct: 224 SDEIISI--PVKPFLGRDIVELSCTKNYIAARSGVGNVCVWGSNEQVCRIGDDKFINFPN 281
Query: 269 --KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
K + +H L GE+++WG++E+ L +DV SP + +P
Sbjct: 282 KIKQISASTSHIL--VLSEKGEIFSWGNSEDNQLS-HKLDVNSSPNINSSSGTTTPTTNT 338
Query: 327 SCGWKH-TAAIS-----EGK-ILT-WGWGGSHGTFSEDGH 358
+ K T + EG+ +L+ + WG S G E G+
Sbjct: 339 TTTTKKSTLQFNNVYQLEGRNVLSVYSWGKSSGAIIEPGN 378
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 78/289 (26%), Positives = 121/289 (41%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSA 137
G H+L LTETG +Y G N QL ++ I +P++I + + V+ IS G + S+A
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA--VTGG 195
I +G LY+WG G K PTKV+ L G+ + VA T
Sbjct: 102 IMENGLLYVWGTLIEG--------GKCTESPTKVDLLKGVTCVSIGINHCAVVADSPTTP 153
Query: 196 GK--VLSWGAGGSGRLGHGQESSILGFLRST-----------SEYTPRLIKELEGVKVKI 242
K V +WG G+LG +S R T E+T ++ EG +V +
Sbjct: 154 EKRSVYTWGTNRKGQLGVVGDSITNAPRRVTLGSKAISVCCGEEFTAAIV---EGNEVFV 210
Query: 243 AAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNEN 297
C + + + F R + ++ + A R + G + WGSNE
Sbjct: 211 WGYNKSRQICSNNSDEIISIPVKPFLGRDIVELSCTKNYIAARSGV---GNVCVWGSNEQ 267
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
C IG ++ P +++ Q+S H +SE G+I +WG
Sbjct: 268 VCR-IGDDKFINFPNKIK---------QISASTSHILVLSEKGEIFSWG 306
Score = 139 (54.0 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 59/234 (25%), Positives = 96/234 (41%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+ GY+HS A+T GELY WG N + QL KA I P K++ + K + G
Sbjct: 39 MDNGYNHSLALTETGELYGWGDNRHHQLS-SNKAITSIDKPIKIQVIPNQRVKSISCGGN 97
Query: 188 QSVAVTGGGKVLSWGA---GGSGR-------LGHGQESSILGF----LRSTSEYTPRLIK 233
S A+ G + WG GG L G +G + + S TP
Sbjct: 98 FSAAIMENGLLYVWGTLIEGGKCTESPTKVDLLKGVTCVSIGINHCAVVADSPTTPEKRS 157
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG 293
+ G + + + RV + G +A+ +E A ++ G E++ WG
Sbjct: 158 VYTWGTNRKGQLGVVGDSITNAPRRVTL-GSKAISVCCGEEFTAA----IVEGNEVFVWG 212
Query: 294 SNENGCLGIGSID-VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
N++ + + D ++ P + PF + ++SC + AA S G + WG
Sbjct: 213 YNKSRQICSNNSDEIISIPVK---PFLGRDIVELSCTKNYIAARSGVGNVCVWG 263
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 169 (64.5 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 84/336 (25%), Positives = 150/336 (44%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+L NG++ +LGL + E + P + F++ +++ ++CGG HTL L E ++A G N
Sbjct: 4 SLGSNGNF-QLGLNNDEDVYSPQIVP-FDR-AIEKISCGGNHTLLLDEDSQLWACGDNRK 60
Query: 101 GQLG--ISENIGYSLEP--LRI-SGLKKEV-VQISTGYHHSSAITVDGE-LYMWGKNSNG 153
GQ G + E + L P LRI + + E V ++ G+ S + D + G+ +G
Sbjct: 61 GQCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSVIVHADRRRVCSCGEGLSG 120
Query: 154 QLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+LG G ++ + I IP + F + G + VT G + G G G+L
Sbjct: 121 ELGQGNRSNSQGLREIDIPYLDD---KEFIIDISAGLRHWICVTNEGNLYGCGDGRKGQL 177
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR---- 265
G ++ +++ ++ + + +E + + F SA + E G V + G
Sbjct: 178 G-----PVV--MKTVNKVS--FLGRIEHAQAVVCGVQF--SAVLQETGHVIVLGGEKWNV 226
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGS--NENGCL-GIGSIDVLHSPERVQGPFSE-S 321
A + +Q N S+ S ++ S + GC+ G D R Q ++ S
Sbjct: 227 AAECDAWQANNSELSSSICSISANWSTLSLLSTEGCVYAFGRCD------RAQKAHTKAS 280
Query: 322 PVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSED 356
+ Q++ G +H +G +L +GW HG S D
Sbjct: 281 DIVQIASGTEHNILRTKKGSVLIYGWN-EHGNASND 315
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 174 (66.3 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 69/257 (26%), Positives = 114/257 (44%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 357 GALLPGAIEQP-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLG 415
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
S +P + L E+VQ++ G H A++ + EL+ WG+ G+LGLG + +
Sbjct: 416 HGSLNDIS-QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH 474
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSIL 218
P V G ++ G + S+ +T G+ L+ G+ +LG G+E +
Sbjct: 475 CCP--QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPH 532
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRA--VDKMLFQ-E 274
+ +TP L+ + G HSA + +G Y FG A V + + +
Sbjct: 533 QQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQ 592
Query: 275 GNHARRPSLISGGELYT 291
G + S ++ G+ +T
Sbjct: 593 GLQGIKISTVACGDAFT 609
Score = 157 (60.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 62/272 (22%), Positives = 108/272 (39%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG GSL +P + A + + +ACG +H L L+ ++A G D G+
Sbjct: 406 FGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGR 465
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + L +E ++ G S +TV G+ G N +LGL +
Sbjct: 466 LGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSL 525
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P + + FT + +Q ++ L + G + R
Sbjct: 526 GEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVD---LGTAHSAAVTXASGDCYTFGSNAR 582
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S P ++ L+G+K+ A G + I G V+ +G A + L ++ A P
Sbjct: 583 RVSR-APCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGR-LGRKDEDAGLPR 640
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+ E + + C ++ + PE V
Sbjct: 641 PVQLDETHPYTVTSVSCCHGNTLLAVRRPEWV 672
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L G + T+GS NGCLG GS++ + P V+ V QV+CG H A+S E ++
Sbjct: 397 LTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMV-QVACGASHVLALSTEREL 455
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
WG G GG+LG G + P +V +A +V CG +
Sbjct: 456 FAWGRG------------DGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGID 496
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 177 (67.4 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 70/251 (27%), Positives = 110/251 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A +P + + L G A G +V T V + G G G+LGH + +
Sbjct: 266 PPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNG-GQLGHLLDPN-- 321
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G T TPR + L + + V + AA + C+ G +Y+ D KM ++ N
Sbjct: 322 GEKCVT---TPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYLLADYQCKKMATKQLN 378
Query: 277 HARRPSLISGG 287
+ L+SGG
Sbjct: 379 --LKKVLVSGG 387
Score = 163 (62.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 43/121 (35%), Positives = 61/121 (50%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y WG N+N LG G + +K P + SG++ KQ L SV ++ G+V + G
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + ++G VY F
Sbjct: 203 HGRGGRLGHGDEQTCL---------VPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTF 253
Query: 263 G 263
G
Sbjct: 254 G 254
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 147 (56.8 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 57/191 (29%), Positives = 88/191 (46%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQI 128
K L+A A G H + LTE G VY+ G + + +E S P+ + L + VV +
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPW-RSEPAELCPSS--PILENALVGQYVVTV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-----LSGIFTKQAA 183
+TG HS A+T G +YMWG+NS GQ + + P P + L + Q A
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLA 156
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKI 242
G E ++A++ ++ +WG G LG + +T T P+ ++ L G V
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQ-----------LGLITTTFPVTKPQKVEHLAGRVVLQ 205
Query: 243 AAAGFLHSACI 253
A G HS +
Sbjct: 206 VACGAFHSLAL 216
Score = 132 (51.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP--LRIS 119
P++ +A + +A G H+ +TE+G VY G N GQ ++ N Y EP + IS
Sbjct: 82 PILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVA-NQQYVPEPNPVSIS 140
Query: 120 G------LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++Q++ G H+ A+++ E++ WG QLGL V P KVE
Sbjct: 141 DSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 122 (48.0 bits), Expect = 0.00091, P = 0.00091
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG H+L LT VY+ G N FGQ
Sbjct: 525 WGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ 584
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG S+ + R++ + E V ++ G +S + VD E + G +G+
Sbjct: 585 LGHSD---FPTTVPRLAKMNSENGVWSVAAGQDYSLFL-VDTEDFQPGLYYSGR 634
Score = 80 (33.2 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
PSL + E++TWG ++G LG G + P V+ V + G H+ A++ K
Sbjct: 516 PSLRT--EVWTWGKGKDGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHSLALT-AK 571
Query: 341 ILTWGWGGSHGTFSEDGHS 359
+ WG + TF + GHS
Sbjct: 572 SQVYSWGSN--TFGQLGHS 588
Score = 58 (25.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G GQLGHG+ + + P V + + + + G H+ AL
Sbjct: 526 GKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 568
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 29 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 88
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 89 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHT 147
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 148 CNVKCPSPVK 157
Score = 161 (61.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 68/249 (27%), Positives = 110/249 (44%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
G V+ G+N+ GQLG+S+ P + L+ ++VV IS G H++ +T G ++ +G
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSG 207
S GQLG +V P +V L G Q A G + ++A V G + ++G G G
Sbjct: 83 AGSCGQLGHDSMNDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKG 140
Query: 208 RLGHGQE------SSILGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
+LG G S + G+ + S + + R + + +I + G + Y
Sbjct: 141 QLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSK----Y 196
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWG---SNENGCLGI-GSIDVLHSPERVQG 316
AVD F+ N A SLI+ + W S N + G + +L S G
Sbjct: 197 ENSSPAVD---FRTMNQAHYTSLINDETIAVWRQKLSEHNNANTMNGVVQILSSAACWNG 253
Query: 317 PFSESPVDQ 325
F E +D+
Sbjct: 254 SFLEKKIDE 262
Score = 139 (54.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+G ++ WG N+ GQLGL + + P K+ + + G E + +T G V +
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV--YISCGEEHTAVLTKSGGVFT 80
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRV 259
+GAG G+LGH + E PR + EL G +V A G H+ A + +G +
Sbjct: 81 FGAGSCGQLGHDSMND---------EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 131
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISG 286
Y FG A ++ + + PS + G
Sbjct: 132 YAFGCGAKGQLGTGHTCNVKCPSPVKG 158
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
PS + G ++ WG N G LG+ + SP V+ ++ V +SCG +HTA +++ G
Sbjct: 18 PSQPAEGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSG 76
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ T+G G S GQLGH + D ++P V + Q++CG HT A
Sbjct: 77 GVFTFGAG------------SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF 124
Query: 400 L 400
+
Sbjct: 125 V 125
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 151 (58.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 59/219 (26%), Positives = 96/219 (43%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS-AF-- 68
Y L++ ++ +L R++ + + +WG GRLGL + R PV S F
Sbjct: 231 YLLERGDRI-VQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFP 289
Query: 69 EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL----RISGL 121
E H + + G HTL LT+ G +YA G N +GQLG + + L R GL
Sbjct: 290 EWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGL 349
Query: 122 KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ ++++ G S A T G +Y+WG + L G + P+ G+
Sbjct: 350 LERNDRIIELIAGGARSLARTEQGFIYIWG--ARWLLVRGDPEFRHHPMLLTENYFPGLR 407
Query: 179 TK-----QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ + G + ++A T G + +WG G+LG G
Sbjct: 408 RRGDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLG 446
Score = 147 (56.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 61/254 (24%), Positives = 109/254 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLT-ETGCVYAT--G 96
WGN G+L G++ +P + S + + A FL+ + + AT G
Sbjct: 92 WGNNYTGQLDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFLSGKARSLVATRQG 151
Query: 97 -LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
L+++ IS ++ R L +VQ+ + Y H+ +T +G +Y WG N +G+L
Sbjct: 152 QLHEYYWERISNTRSEFIQH-RHYELNVTIVQLLSDYRHAFILTEEGGIYGWGFNISGEL 210
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQS--VAVTGGGKVLSWGAGGSGRLG 210
GLG + + P + + L F VA T G V WG GRLG
Sbjct: 211 GLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLG 270
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
E L + + ++ P + ++V + G H+ + + G +Y +G + ++
Sbjct: 271 LDDEQDRLHPVELSWDFFPEWHPDDYIIQVVV---GDRHTLALTQLGYIYAWGKNSYGQL 327
Query: 271 LFQEGNHARRPSLI 284
F++ RP+L+
Sbjct: 328 GFRDQQDRNRPALL 341
Score = 143 (55.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 68/261 (26%), Positives = 108/261 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKA------LACGGAHTLFLTETGCVYAT 95
WG G LGLG R +P + F + L+ L + + T G VY
Sbjct: 202 WGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVW 261
Query: 96 GLNDFGQLGISENIGYSLEPLRIS-GLKKE------VVQISTGYHHSSAITVDGELYMWG 148
G N G+LG+ + L P+ +S E ++Q+ G H+ A+T G +Y WG
Sbjct: 262 GFNYRGRLGLDDEQD-RLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWG 320
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL-----GFEQSVAVTGGGKVLSWGA 203
KNS GQLG + + P G+ + + G +S+A T G + WGA
Sbjct: 321 KNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA 380
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L G + T Y P L + + + V++ A G H+ E G +Y +G
Sbjct: 381 --RWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHL-VELIA-GPDHTLARTEQGYIYAWG 436
Query: 264 DRAVDKMLFQEGNHARRPSLI 284
++ + R+P+L+
Sbjct: 437 RNYYGQLGLGDRRIQRQPALL 457
Score = 61 (26.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
G +Y WG N G LG+G + P + P + P+ Q + + E KI
Sbjct: 430 GYIYAWGRNYYGQLGLGDRRIQRQPALLD-PNAIPPLSQWRNAFSFIKSFREEKI 483
Score = 55 (24.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSP-----ERVQGPFSESP--VDQVSCGWKHTAAISEG 339
G +Y WG N G LG + P R G + ++ ++ G + A +G
Sbjct: 314 GYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQG 373
Query: 340 KILTWG 345
I WG
Sbjct: 374 FIYIWG 379
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 151 (58.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 59/219 (26%), Positives = 96/219 (43%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS-AF-- 68
Y L++ ++ +L R++ + + +WG GRLGL + R PV S F
Sbjct: 231 YLLERGDRI-VQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFP 289
Query: 69 EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL----RISGL 121
E H + + G HTL LT+ G +YA G N +GQLG + + L R GL
Sbjct: 290 EWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGL 349
Query: 122 KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ ++++ G S A T G +Y+WG + L G + P+ G+
Sbjct: 350 LERNDRIIELIAGGARSLARTEQGFIYIWG--ARWLLVRGDPEFRHHPMLLTENYFPGLR 407
Query: 179 TK-----QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ + G + ++A T G + +WG G+LG G
Sbjct: 408 RRGDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLG 446
Score = 147 (56.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 61/254 (24%), Positives = 109/254 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLT-ETGCVYAT--G 96
WGN G+L G++ +P + S + + A FL+ + + AT G
Sbjct: 92 WGNNYTGQLDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFLSGKARSLVATRQG 151
Query: 97 -LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
L+++ IS ++ R L +VQ+ + Y H+ +T +G +Y WG N +G+L
Sbjct: 152 QLHEYYWERISNTRSEFIQH-RHYELNVTIVQLLSDYRHAFILTEEGGIYGWGFNISGEL 210
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQS--VAVTGGGKVLSWGAGGSGRLG 210
GLG + + P + + L F VA T G V WG GRLG
Sbjct: 211 GLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLG 270
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
E L + + ++ P + ++V + G H+ + + G +Y +G + ++
Sbjct: 271 LDDEQDRLHPVELSWDFFPEWHPDDYIIQVVV---GDRHTLALTQLGYIYAWGKNSYGQL 327
Query: 271 LFQEGNHARRPSLI 284
F++ RP+L+
Sbjct: 328 GFRDQQDRNRPALL 341
Score = 143 (55.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 68/261 (26%), Positives = 108/261 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKA------LACGGAHTLFLTETGCVYAT 95
WG G LGLG R +P + F + L+ L + + T G VY
Sbjct: 202 WGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVW 261
Query: 96 GLNDFGQLGISENIGYSLEPLRIS-GLKKE------VVQISTGYHHSSAITVDGELYMWG 148
G N G+LG+ + L P+ +S E ++Q+ G H+ A+T G +Y WG
Sbjct: 262 GFNYRGRLGLDDEQD-RLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWG 320
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL-----GFEQSVAVTGGGKVLSWGA 203
KNS GQLG + + P G+ + + G +S+A T G + WGA
Sbjct: 321 KNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA 380
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L G + T Y P L + + + V++ A G H+ E G +Y +G
Sbjct: 381 --RWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHL-VELIA-GPDHTLARTEQGYIYAWG 436
Query: 264 DRAVDKMLFQEGNHARRPSLI 284
++ + R+P+L+
Sbjct: 437 RNYYGQLGLGDRRIQRQPALL 457
Score = 61 (26.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
G +Y WG N G LG+G + P + P + P+ Q + + E KI
Sbjct: 430 GYIYAWGRNYYGQLGLGDRRIQRQPALLD-PNAIPPLSQWRNAFSFIKSFREEKI 483
Score = 55 (24.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSP-----ERVQGPFSESP--VDQVSCGWKHTAAISEG 339
G +Y WG N G LG + P R G + ++ ++ G + A +G
Sbjct: 314 GYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQG 373
Query: 340 KILTWG 345
I WG
Sbjct: 374 FIYIWG 379
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 146 (56.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 58/191 (30%), Positives = 88/191 (46%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQI 128
K L+A A G H + LTE G VY+ G + + G E S P+ + L + VV +
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPW-RSGPVEICPSS--PILENALVGQYVVTV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---EC--LSGIFTKQAA 183
+TG HS A+T +G YMWG+NS GQ + + P P + E L + Q A
Sbjct: 97 ATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLA 156
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKI 242
G E ++A++ ++ +WG G LG + + T P+ ++ L G V
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQ-----------LGLITTAFPVTKPQKVEHLAGRVVLQ 205
Query: 243 AAAGFLHSACI 253
A G HS +
Sbjct: 206 VACGAFHSLAL 216
Score = 128 (50.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 42/139 (30%), Positives = 66/139 (47%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P++ +A + +A G H+ +T+ G Y G N GQ ++ N Y EP +S
Sbjct: 82 PILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVA-NQQYVPEPNPVSIA 140
Query: 122 KKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
E ++Q++ G H+ A+++ E++ WG QLGL A V P KVE
Sbjct: 141 DSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 122 (48.0 bits), Expect = 0.00092, P = 0.00092
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG H+L LT VY+ G N FGQ
Sbjct: 531 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ 590
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG S+ + R++ + E V ++ G +S + VD E + G +G+
Sbjct: 591 LGHSD---FPTTVPRLAKISSENGVWSVAAGRDYSLFL-VDTEDFQPGLYYSGR 640
Score = 79 (32.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
PSL + E++TWG + G LG G + P V+ V + G H+ A++ K
Sbjct: 522 PSLRT--EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHSLALT-AK 577
Query: 341 ILTWGWGGSHGTFSEDGHS 359
+ WG + TF + GHS
Sbjct: 578 SQVYSWGSN--TFGQLGHS 594
Score = 57 (25.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G GQLGHG+ + + P V + + + + G H+ AL
Sbjct: 532 GKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 574
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 145 (56.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 57/191 (29%), Positives = 88/191 (46%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQI 128
K L+A A G H + LTE G VY+ G + + G E S P+ + L + V+ +
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPW-RSGPVEICPSS--PILENALVGQYVITV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---EC--LSGIFTKQAA 183
+TG HS A+T +G YMWG+NS GQ + + P P + E L + Q A
Sbjct: 97 ATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLA 156
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKI 242
G E ++A++ ++ +WG G LG + + T P+ ++ L G V
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQ-----------LGLITTAFPVTKPQKVEHLAGRVVLQ 205
Query: 243 AAAGFLHSACI 253
A G HS +
Sbjct: 206 VACGAFHSLAL 216
Score = 127 (49.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 42/139 (30%), Positives = 66/139 (47%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P++ +A + +A G H+ +T+ G Y G N GQ ++ N Y EP +S
Sbjct: 82 PILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVA-NQQYVPEPNPVSIA 140
Query: 122 KKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
E ++Q++ G H+ A+++ E++ WG QLGL A V P KVE
Sbjct: 141 DSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 123 (48.4 bits), Expect = 0.00072, P = 0.00072
Identities = 37/114 (32%), Positives = 56/114 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG H+L LT VY+ G N FGQ
Sbjct: 531 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ 590
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG S+ + R++ + E V I+ G +S + VD E + G +G+
Sbjct: 591 LGHSD---FPTTVPRLAKISSENGVWSIAAGRDYSLFL-VDTEDFQPGLYYSGR 640
Score = 79 (32.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
PSL + E++TWG + G LG G + P V+ V + G H+ A++ K
Sbjct: 522 PSLRT--EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHSLALT-AK 577
Query: 341 ILTWGWGGSHGTFSEDGHS 359
+ WG + TF + GHS
Sbjct: 578 SQVYSWGSN--TFGQLGHS 594
Score = 57 (25.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G GQLGHG+ + + P V + + + + G H+ AL
Sbjct: 532 GKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 574
>SGD|S000000018 [details] [associations]
symbol:ATS1 "Protein required for modification of wobble
nucleosides in tRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0007017 "microtubule-based process" evidence=IGI;ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA;IPI] [GO:0002098 "tRNA wobble uridine
modification" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IGI;IMP] [GO:0007117 "budding cell bud
growth" evidence=IGI;IMP] SGD:S000000018 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0000226 EMBL:L05146 EMBL:BK006935
GO:GO:0007117 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
PIR:S36714 RefSeq:NP_009382.2 ProteinModelPortal:P31386 SMR:P31386
IntAct:P31386 MINT:MINT-2786397 STRING:P31386 PeptideAtlas:P31386
EnsemblFungi:YAL020C GeneID:851213 KEGG:sce:YAL020C CYGD:YAL020c
eggNOG:COG5184 HOGENOM:HOG000163478 KO:K15462 OMA:GAGCATS
OrthoDB:EOG4H75MP NextBio:968094 Genevestigator:P31386
GermOnline:YAL020C GO:GO:0002098 Uniprot:P31386
Length = 333
Score = 103 (41.3 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 35/116 (30%), Positives = 53/116 (45%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGK 149
CVYA G N QLG+ + + G +V+ I+ G +HS +T DG L G
Sbjct: 3 CVYAFGSNGQRQLGLGHDEDMDTPQRSVPGDDGAIVRKIACGGNHSVMLTNDGNLVGCGD 62
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
N G+L +A + + VE + + A G++ +V V G+V W GG
Sbjct: 63 NRRGELD-SAQALRQVHDWRPVEVPAPVV--DVACGWDTTVIVDADGRV--WQRGG 113
Score = 103 (41.3 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 55/195 (28%), Positives = 75/195 (38%)
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G Q+ V G +V WG+ +L QE RS E P L+ + V V
Sbjct: 133 AVYGCFQNFVVVQGTRVYGWGSNTKCQL---QEPKS----RSLKE--PVLVYDTGSVAVD 183
Query: 242 IAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC- 299
A G +DE GR V+ G L Q+ L ++ W + N
Sbjct: 184 YVAMGKDFMVIVDEGGRIVHASGRLPTGFELKQQQKRHNLVVLCMWTSIHLWNARLNTVE 243
Query: 300 -LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH---TAAISEGK-----ILTWGWGGSH 350
G G+ L ER+ + P+ V+ G +H T A EGK + WGWG H
Sbjct: 244 SFGRGTHSQLFPQERL-----DFPIVGVATGSEHGILTTANQEGKSHCYNVYCWGWG-EH 297
Query: 351 GTFS-EDGHSSGGQL 364
G + G G QL
Sbjct: 298 GNCGPQKGSQPGLQL 312
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 173 (66.0 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 49/163 (30%), Positives = 78/163 (47%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGC--VYATGLNDFGQLGISENIGYSLEPLRIS 119
P F + + + H++ LT+ VY G+ G++G + ++ Y+ P I
Sbjct: 186 PTSGQLFSRDKILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIGFNTDVQYNFIP--IP 243
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-KAAKVIPI---PTKVECLS 175
G+ +V+QIS + HS A+T G +Y WGKN +G+LGL + K PI P ++
Sbjct: 244 GIIHKVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFK 303
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A G SVA T + SWG +G+LG S++
Sbjct: 304 DYQIIGMAAGKSYSVAWTDTD-IYSWGLN-NGQLGISDHISVV 344
Score = 41 (19.5 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSE 320
SNE L GSI +L S E + FS+
Sbjct: 594 SNEMQLLFEGSIPILTSYENYKQSFSD 620
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 135 (52.6 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 69/277 (24%), Positives = 110/277 (39%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G V+ TG
Sbjct: 541 IYYTGKYQSLGIKQGGPSSGKWVELPVTKSPKIVQFSVGHDGSHALLVAEDGSVFFTGSA 600
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKEV-VQISTGYHH--SSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E + + T ++ SS +T DGELYM+GK+
Sbjct: 601 SKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGSSSIVTKDGELYMFGKD---- 656
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--- 211
A +V L G F Q A+G + +T G+V ++G G+ G
Sbjct: 657 -------AIYSDSTCQVSDLKGHFVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCGRDTG 709
Query: 212 --GQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRVYIFGD-RA 266
Q G + L EL+ + K + G +H +D+ + GD
Sbjct: 710 AMSQAGKAFGVENMATAMDEDLEDELDEKEEKSMMCQPG-MHKWKLDQCMVCTVCGDCTG 768
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 769 YGASCVSSG----RPDRVPGG-ICGCGSGESGCSSCG 800
Score = 125 (49.1 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+ L G T Q G
Sbjct: 928 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GSPTLVQALPGPST-QVTAG 984
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLG 210
+ + G+V ++G+ G+LG
Sbjct: 985 SNHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 101 (40.6 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L+ G++YT+G ++G LG G ++ SP VQ P QV+ G HTA + +G++
Sbjct: 940 LMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQA--LPGPSTQVTAGSNHTAVLLMDGQV 997
Query: 342 LTWG 345
T+G
Sbjct: 998 FTFG 1001
Score = 99 (39.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 37/109 (33%), Positives = 50/109 (45%)
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
GS+E G I + P V+ V QVSCG+ H+ + E G + T+G+G HG
Sbjct: 899 GSSERGDKDASKITT-YPPGAVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYG-QHG 955
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
QLGHG+ PT+V + QV+ G NHT LL
Sbjct: 956 -----------QLGHGDVNSRGSPTLVQALPG-PSTQVTAGSNHTAVLL 992
Score = 88 (36.0 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 39/155 (25%), Positives = 65/155 (41%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---GKKAAKVIPIP-TKVECL 174
+G +E I G + T G++Y GK + LG+ G + K + +P TK +
Sbjct: 516 TGFDEEAALIGAGREFALMKTASGKIYYTGKYQS--LGIKQGGPSSGKWVELPVTKSPKI 573
Query: 175 SGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
Q ++G + S A V G V G+ G G +S R Y P+ +
Sbjct: 574 V-----QFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSR-----RQPKPYKPKKM 623
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LE A S+ + ++G +Y+FG A+
Sbjct: 624 IKLETKMAVYTACNNGSSSIVTKDGELYMFGKDAI 658
Score = 76 (31.8 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+DG S G Y P V F ++A+QVSCGF+H+ L+E
Sbjct: 897 KDGSSERGDKDASKITTY-PPGAVRFDCELRAVQVSCGFHHSVVLME 942
Score = 76 (31.8 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 12 YYLKQDIKLGSKLGI---CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
Y K+ IKL +K+ + C SS + + +G+ G ++ S V S
Sbjct: 618 YKPKKMIKLETKMAVYTACNNGSSSIVTK-------DGELYMFGKDAIYSDSTCQV-SDL 669
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ H + +A G AHT LT++G V+ G+N+ GQ G
Sbjct: 670 KGHFVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCG 705
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKL 24
LGR A++K LK+ K+ SK+
Sbjct: 90 LGRGKKALSKKKLKRRQKVKSKV 112
Score = 39 (18.8 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 324 DQVSCGWKHTAAI 336
D + CGW T +
Sbjct: 2263 DDIRCGWPTTVVV 2275
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 149 (57.5 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 55/192 (28%), Positives = 80/192 (41%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
+K +A G +T LTE G +Y G+N+ G+LG+ + I P R+ LK EVV I+
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRT-PTRVIRLKNEVVSTIACS 474
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS+ T G++Y+WG++ GK A IP P + K G
Sbjct: 475 STHSACYTESGKMYVWGQSDE----TGKIQA--IPSPLPIHSYLDREIKSPNGGGVGGF- 527
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
GGGK+ G Q + F+ L LE V+ G H
Sbjct: 528 FGGGGKIKQLACGQRCIAVLTQMGEV--FMWEIPGIPIPLRNALENHSVRNIVMGNFHLV 585
Query: 252 CIDENGRVYIFG 263
C+ ++G V G
Sbjct: 586 CLTDSGEVVTIG 597
Score = 141 (54.7 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 52/178 (29%), Positives = 77/178 (43%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSILGFLRSTSEYTPRLIKE 234
KQ ALG V +T GG V +WG+ +G+LG+ Q+ L +S S P
Sbjct: 336 KQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQP----- 390
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGS 294
++ L + C + + + V + N A +L GELY WG
Sbjct: 391 --SASSSSPSSSSLQTTCTPKMVEI-----KCVKYIATGVKNTA---ALTEWGELYMWGI 440
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
NE+G LG+G +P RV +E V ++C H+A +E GK+ WG G
Sbjct: 441 NEHGELGLGDTIDRRTPTRVIRLKNEV-VSTIACSSTHSACYTESGKMYVWGQSDETG 497
Score = 135 (52.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 58/229 (25%), Positives = 97/229 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND-F 100
+WG ++G LGLG R P + + +AC H+ TE+G +Y G +D
Sbjct: 437 MWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQSDET 496
Query: 101 GQL-GISENI---GYSLEPLR------ISGL---KKEVVQISTGYHHSSAITVDGELYMW 147
G++ I + Y ++ + G ++ Q++ G + +T GE++MW
Sbjct: 497 GKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMW 556
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G IPIP + L + +G V +T G+V++ G +G
Sbjct: 557 --EIPG-----------IPIPLR-NALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTG 602
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+LG + G ++ S + P + E V V IAA F HS + EN
Sbjct: 603 QLGRTDAENEPGIVKQLS-FDPDGLNSDEFV-VSIAAGEF-HSVALVEN 648
Score = 127 (49.8 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 60/199 (30%), Positives = 82/199 (41%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
K V I+TG +++A+T GELYMWG N +G+LGLG + PT+V L
Sbjct: 414 KCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDR--RTPTRVIRLKNEVVSTI 471
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV---- 238
A S T GK+ WG G+ +I L S Y R IK G
Sbjct: 472 ACSSTHSACYTESGKMYVWGQSDET----GKIQAIPSPLPIHS-YLDREIKSPNGGGVGG 526
Query: 239 ------KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRP---------S 282
K+K A G A + + G V+++ + L NH+ R
Sbjct: 527 FFGGGGKIKQLACGQRCIAVLTQMGEVFMWEIPGIPIPLRNALENHSVRNIVMGNFHLVC 586
Query: 283 LISGGELYTWGSNENGCLG 301
L GE+ T G N+ G LG
Sbjct: 587 LTDSGEVVTIGRNKTGQLG 605
Score = 79 (32.9 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 33/130 (25%), Positives = 59/130 (45%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEK--HSLKALACGGAHTLFLTETGCVYATGLN 98
+G+G G LGLG + ++ P + F + +K +ACG HT+F+T+ +Y G+
Sbjct: 6 FGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYICGIK 65
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG---ELYMWGKNSNGQL 155
+ G + + Y+ P + +T ++ T +G E KN+NG+
Sbjct: 66 KDPKHGTT--LFYTSPPPTTT-----TTTTTTSSTSATTTTTNGMVNEKNNNNKNNNGEK 118
Query: 156 GLGKKAAKVI 165
+ K VI
Sbjct: 119 IVNSKPESVI 128
Score = 73 (30.8 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF--TKQAALGFEQSVAVT 193
++ +G SNG LGLGK P P KV + I K+ A G +V VT
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVT 54
Score = 71 (30.1 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+++K +A G H + LTE G V+ G N GQLG
Sbjct: 333 NTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 38 (18.4 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 349 SHGTFSEDGHSSGGQL-GHGND 369
+H +GH S G G+GN+
Sbjct: 730 NHHNGDSNGHHSNGHYHGNGNN 751
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 141 (54.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 54/190 (28%), Positives = 84/190 (44%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
K L+A A G H + LTE G VY+ G + I S L + + + VV ++
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPWRSE--PAEICPSCPILENALIGQFVVTVA 97
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-----CLSGIFTKQAAL 184
+G H+ A+T G YMWG+NS GQ + + P P + L + Q A
Sbjct: 98 SGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLAC 157
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKIA 243
G E ++A++ ++ +WG G LG + +T T P+ ++ L G V
Sbjct: 158 GEEHTLALSISREIWAWGTGCQ-----------LGLITTTFPVTKPQKVEHLAGRVVLQV 206
Query: 244 AAGFLHSACI 253
A G HS +
Sbjct: 207 ACGAFHSLAL 216
Score = 126 (49.4 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 43/139 (30%), Positives = 66/139 (47%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP--LRIS 119
P++ +A + +A G H +TE+G Y G N GQ ++ N Y EP + IS
Sbjct: 82 PILENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVA-NQQYVPEPNPVSIS 140
Query: 120 G------LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++Q++ G H+ A+++ E++ WG QLGL V P KVE
Sbjct: 141 DSETSSLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 74 (31.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
PSL + E++TWG + G LG G + P V+ V + G H+ A++ K
Sbjct: 521 PSLRT--EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIYLEAGGYHSLALT-AK 576
Query: 341 ILTWGWGGSHGTFSEDGH 358
+ WG + TF + GH
Sbjct: 577 SQVYSWGSN--TFGQLGH 592
Score = 56 (24.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G GQLGHG+ + + P V + + + + G H+ AL
Sbjct: 531 GKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLAL 573
Score = 55 (24.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
++++ E +L + ++Y+WGSN G LG D + R+ SE+ V V+
Sbjct: 559 EVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLG--HYDFPTTVPRLAKVSSENGVWSVAA 616
Query: 329 G 329
G
Sbjct: 617 G 617
>UNIPROTKB|H0YE53 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 Ensembl:ENST00000533241 Uniprot:H0YE53
Length = 144
Score = 118 (46.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
GE+Y+WG N +GQL +AA +P+P K+E K A+ G+ VA T GK+
Sbjct: 4 GEVYVWGSNKHGQLA--NEAA-FLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMF 60
Query: 200 SWGAGGSGRLGHGQES 215
+WG G+LG E+
Sbjct: 61 TWGRADYGQLGRKLET 76
Score = 108 (43.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTW 344
GE+Y WGSN++G L L P++++ F V + GW H A +E GK+ TW
Sbjct: 4 GEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTW 62
Query: 345 G 345
G
Sbjct: 63 G 63
Score = 38 (18.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 386 ALQVSCGFNHTGALL 400
A +VSCG H A++
Sbjct: 108 ATEVSCGSEHNLAII 122
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 171 (65.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 67/253 (26%), Positives = 111/253 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + +K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G G+LGH + S
Sbjct: 266 PPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNG-GQLGHLLDPS-- 321
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G T+ PR + L + + + + AA + C+ G +Y+ D K+ ++ N
Sbjct: 322 GEKCVTA---PRQVSALHHKDIALSLVAASDGATVCVTARGDIYLLADYQCKKLASKQLN 378
Query: 277 HARRPSLISGGEL 289
+ L+SGG +
Sbjct: 379 --LKKVLVSGGHM 389
Score = 163 (62.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 43/121 (35%), Positives = 61/121 (50%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SG++ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 G 263
G
Sbjct: 254 G 254
Score = 121 (47.7 bits), Expect = 0.00094, P = 0.00094
Identities = 40/118 (33%), Positives = 56/118 (47%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV---DQVSCGWKHTAAISE-GKILT 343
++YTWG N N LG GS + H PE V FS S V V C + H+ +S+ G++ T
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVD-LFSRSGVYIKQVVLCKF-HSVFLSQKGQVYT 200
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G H GG+LGHG++ + P +V QV+ +HT L E
Sbjct: 201 CG------------HGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTE 246
Score = 38 (18.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
EL T +E G+GS L SP+ G S+
Sbjct: 1022 ELLT-SDSEGSYAGVGSPRDLQSPDFTTGFHSD 1053
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 134 (52.2 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 45/139 (32%), Positives = 68/139 (48%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP--LRIS 119
P++ SA + +A G HT +T++G VY G N GQ ++ N Y EP + IS
Sbjct: 87 PILESALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVA-NQPYVPEPNPVSIS 145
Query: 120 G------LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++Q++ G H+ A+++ E++ WG QLGL V P KVE
Sbjct: 146 DSETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTK-PQKVEH 202
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 203 LAGRVVLQVACGAFHSLAL 221
Score = 132 (51.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 51/186 (27%), Positives = 79/186 (42%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRISGLKKE-VVQISTGYH 133
A G H + LTE + FG L + P+ S L + VV ++TG
Sbjct: 47 ALGVKHGVLLTEVFKPSDGEVYSFGTLPWRSEPAETCPSNPILESALVGQYVVTVATGSF 106
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-----LSGIFTKQAALGFEQ 188
H+ A+T G +YMWG+NS GQ + + P P + L + Q A G E
Sbjct: 107 HTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQLACGEEH 166
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGF 247
++A++ ++ +WG G LG + +T T P+ ++ L G V A G
Sbjct: 167 TLALSLSREIWAWGTGCQ-----------LGLITTTFPVTKPQKVEHLAGRVVLQVACGA 215
Query: 248 LHSACI 253
HS +
Sbjct: 216 FHSLAL 221
Score = 125 (49.1 bits), Expect = 0.00044, P = 0.00044
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG H+L LT VY+ G N FGQ
Sbjct: 535 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ 594
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
LG S+ + R++ + E V ++ G +S + VD E + G +G+L
Sbjct: 595 LGHSD---FPTTVPRLAKVNSENGVWSVAAGQDYSLFL-VDTEDFQPGLCYSGRL 645
Score = 79 (32.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
PSL + E++TWG + G LG G + P V+ V + G H+ A++ K
Sbjct: 526 PSLRT--EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHSLALT-AK 581
Query: 341 ILTWGWGGSHGTFSEDGHS 359
+ WG + TF + GHS
Sbjct: 582 SQVYSWGSN--TFGQLGHS 598
Score = 57 (25.1 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G GQLGHG+ + + P V + + + + G H+ AL
Sbjct: 536 GKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 578
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 120 (47.3 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 66/278 (23%), Positives = 114/278 (41%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G V+ TG
Sbjct: 526 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSA 585
Query: 99 DFGQLGISENI---GYSLEPLRISGLKKEVVQISTGYHH--SSAITVDGELYMWGKNSNG 153
G+ G S +P +I ++ ++V + T ++ SS I+ DGELYM+GK++
Sbjct: 586 SKGEDGESAKSRRQSKPYKPKKIIKMEGKIV-VCTACNNGSSSVISKDGELYMFGKDA-- 642
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-- 211
+ ++ + V L G F Q A+G + + G+V ++G G+ G
Sbjct: 643 ---IYSDSSSL------VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 693
Query: 212 ---GQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGD-R 265
Q G + L +EL+ K + G +H +++ + GD
Sbjct: 694 GAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMCPPG-MHKWKLEQCMVCTVCGDCT 752
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 753 GYGASCVSSG----RPDRVPGG-ICGCGSGESGCAVCG 785
Score = 116 (45.9 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+++G+ G K A+KV P + +C + Q + GF SV + G V ++G G
Sbjct: 888 KDASGERG-EKDASKVTTYPPGSVRFDC--EVRAVQVSCGFHHSVVLMENGDVYTFGYGQ 944
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 945 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAVLVMDGQVFTFG 992
Score = 97 (39.2 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-ISEGKI 341
L+ G++YT+G ++G LG G ++ P VQ P QV+ G HTA + +G++
Sbjct: 931 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQVTAGSNHTAVLVMDGQV 988
Query: 342 LTWG 345
T+G
Sbjct: 989 FTFG 992
Score = 91 (37.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 325 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
QVSCG+ H+ + E G + T+G+G HG QLGHG+ PT+V
Sbjct: 920 QVSCGFHHSVVLMENGDVYTFGYG-QHG-----------QLGHGDVNSRGCPTLVQALPG 967
Query: 384 VKALQVSCGFNHTGALL 400
+ QV+ G NHT L+
Sbjct: 968 -PSTQVTAGSNHTAVLV 983
Score = 74 (31.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 356 DGHS-SGGQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D H + G+ G + V P V F V+A+QVSCGF+H+ L+E
Sbjct: 885 DKHKDASGERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLME 933
Score = 73 (30.8 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
Y K+ IK+ K+ +C + + + + +G+ G ++ S +V S + H
Sbjct: 603 YKPKKIIKMEGKIVVCTACNNGSS----SVISKDGELYMFGKDAIYSDSSSLV-SDLKGH 657
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ +A G AHT L + G V+ G+N+ GQ G
Sbjct: 658 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 690
Score = 48 (22.0 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDV 307
L+ G+++T+GS G LG +DV
Sbjct: 982 LVMDGQVFTFGSFSKGQLGRPILDV 1006
Score = 38 (18.4 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 324 DQVSCGWKHTAAI 336
D + CGW T +
Sbjct: 2217 DDIRCGWPTTITV 2229
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 142 (55.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 42/143 (29%), Positives = 68/143 (47%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F H +ALA +H L + G + G+ S+ Y +R + VQ
Sbjct: 848 FMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYPPGSVRFD-CELRAVQ 906
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G+HHS + +G++Y +G +GQLG G ++ PT V+ L G T Q G
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQALPGPST-QVTAGSN 963
Query: 188 QSVAVTGGGKVLSWGAGGSGRLG 210
+ A+ G+V ++G+ G+LG
Sbjct: 964 HTAALLMDGQVFTFGSFSKGQLG 986
Score = 119 (46.9 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 66/277 (23%), Positives = 111/277 (40%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 512 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 571
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 572 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 628
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--- 211
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 629 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 680
Query: 212 --GQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGD-RA 266
Q G + L +EL+ K + G +H +++ + GD
Sbjct: 681 AMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMCPPG-MHKWKLEQCMVCTVCGDCTG 739
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 740 YGASCVSSG----RPDRVPGG-ICGCGSGESGCAVCG 771
Score = 104 (41.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 55/211 (26%), Positives = 90/211 (42%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SA+ T +G++Y GK + LG+ G A K +
Sbjct: 478 LEKDLHIISTGFDEESAVLGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 535
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G + G+ G G +S R
Sbjct: 536 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQ 585
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNH-- 277
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ H
Sbjct: 586 SKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFV 645
Query: 278 -------ARRPSLISGGELYTWGSNENGCLG 301
A L+ GE++T+G N G G
Sbjct: 646 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 100 (40.3 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L+ G++YT+G ++G LG G ++ P VQ P QV+ G HTAA+ +G++
Sbjct: 917 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQVTAGSNHTAALLMDGQV 974
Query: 342 LTWG 345
T+G
Sbjct: 975 FTFG 978
Score = 99 (39.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 38/109 (34%), Positives = 50/109 (45%)
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
GS E G I + P V+ V QVSCG+ H+ + E G + T+G+G HG
Sbjct: 876 GSGERGEKDASKITT-YPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYG-QHG 932
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
QLGHG+ PT+V + QV+ G NHT ALL
Sbjct: 933 -----------QLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAALL 969
Score = 75 (31.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 356 DGHSSG-GQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D H G G+ G + + P V F ++A+QVSCGF+H+ L+E
Sbjct: 871 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME 919
Score = 38 (18.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 324 DQVSCGWKHTAAI 336
D + CGW T +
Sbjct: 2239 DDIRCGWPTTITV 2251
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 164 (62.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 44/121 (36%), Positives = 61/121 (50%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SGI+ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 G 263
G
Sbjct: 254 G 254
Score = 162 (62.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 65/253 (25%), Positives = 107/253 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G G+LG +L
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLG-----CLL 318
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
PR + L + + + + AA + C+ G +Y+ D KM ++ N
Sbjct: 319 DPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLN 378
Query: 277 HARRPSLISGGEL 289
+ L+SGG +
Sbjct: 379 --LKKVLVSGGHM 389
Score = 156 (60.0 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 70/243 (28%), Positives = 106/243 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + H+ +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 104 GI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
GI S N+ ++ + G + ++ ++ G H+ T + +Y G N GQLG
Sbjct: 262 GIIPPPSSCNVPRQIQAKYLKG--RTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGCL 317
Query: 157 LGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L K + P +V L I A +V VT G + ++ ++
Sbjct: 318 LDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMA-SKQ 376
Query: 215 SSILGFLRSTS--EYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
++ L S EY P +KE G K+ I A +D GRV+ + R+V+
Sbjct: 377 LNLKKVLVSGGHMEYKVDPEHLKENGGQKICILA--------MDGAGRVFCW--RSVNSS 426
Query: 271 LFQ 273
L Q
Sbjct: 427 LKQ 429
Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
S EL T +E G+GS L SP+ G S+
Sbjct: 1006 SSTELLT-SDSEGSYAGVGSPRDLQSPDFTTGFHSD 1040
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 164 (62.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 44/121 (36%), Positives = 61/121 (50%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SGI+ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 G 263
G
Sbjct: 254 G 254
Score = 162 (62.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 65/253 (25%), Positives = 107/253 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G G+LG +L
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLG-----CLL 318
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
PR + L + + + + AA + C+ G +Y+ D KM ++ N
Sbjct: 319 DPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLN 378
Query: 277 HARRPSLISGGEL 289
+ L+SGG +
Sbjct: 379 --LKKVLVSGGHM 389
Score = 156 (60.0 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 70/243 (28%), Positives = 106/243 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + H+ +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 104 GI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
GI S N+ ++ + G + ++ ++ G H+ T + +Y G N GQLG
Sbjct: 262 GIIPPPSSCNVPRQIQAKYLKG--RTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGCL 317
Query: 157 LGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L K + P +V L I A +V VT G + ++ ++
Sbjct: 318 LDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMA-SKQ 376
Query: 215 SSILGFLRSTS--EYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
++ L S EY P +KE G K+ I A +D GRV+ + R+V+
Sbjct: 377 LNLKKVLVSGGHMEYKVDPEHLKENGGQKICILA--------MDGAGRVFCW--RSVNSS 426
Query: 271 LFQ 273
L Q
Sbjct: 427 LKQ 429
Score = 38 (18.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
EL T +E G+GS L SP+ G S+
Sbjct: 823 ELLT-SDSEGSYAGVGSPRDLQSPDFTTGFHSD 854
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 120 (47.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 66/278 (23%), Positives = 114/278 (41%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G V+ TG
Sbjct: 512 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSA 571
Query: 99 DFGQLGISENI---GYSLEPLRISGLKKEVVQISTGYHH--SSAITVDGELYMWGKNSNG 153
G+ G S +P +I ++ ++V + T ++ SS I+ DGELYM+GK++
Sbjct: 572 SKGEDGESAKSRRQSKPYKPKKIIKMEGKIV-VCTACNNGSSSVISKDGELYMFGKDA-- 628
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-- 211
+ ++ + V L G F Q A+G + + G+V ++G G+ G
Sbjct: 629 ---IYSDSSSL------VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 679
Query: 212 ---GQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGD-R 265
Q G + L +EL+ K + G +H +++ + GD
Sbjct: 680 GAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMCPPG-MHKWKLEQCMVCTVCGDCT 738
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 739 GYGASCVSSG----RPDRVPGG-ICGCGSGESGCAVCG 771
Score = 116 (45.9 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+++G+ G K A+KV P + +C + Q + GF SV + G V ++G G
Sbjct: 874 KDASGERG-EKDASKVTTYPPGSVRFDC--EVRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 931 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAVLVMDGQVFTFG 978
Score = 97 (39.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-ISEGKI 341
L+ G++YT+G ++G LG G ++ P VQ P QV+ G HTA + +G++
Sbjct: 917 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQVTAGSNHTAVLVMDGQV 974
Query: 342 LTWG 345
T+G
Sbjct: 975 FTFG 978
Score = 91 (37.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 325 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
QVSCG+ H+ + E G + T+G+G HG QLGHG+ PT+V
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYG-QHG-----------QLGHGDVNSRGCPTLVQALPG 953
Query: 384 VKALQVSCGFNHTGALL 400
+ QV+ G NHT L+
Sbjct: 954 -PSTQVTAGSNHTAVLV 969
Score = 74 (31.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 356 DGHS-SGGQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D H + G+ G + V P V F V+A+QVSCGF+H+ L+E
Sbjct: 871 DKHKDASGERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLME 919
Score = 73 (30.8 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
Y K+ IK+ K+ +C + + + + +G+ G ++ S +V S + H
Sbjct: 589 YKPKKIIKMEGKIVVCTACNNGSS----SVISKDGELYMFGKDAIYSDSSSLV-SDLKGH 643
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ +A G AHT L + G V+ G+N+ GQ G
Sbjct: 644 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 48 (22.0 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDV 307
L+ G+++T+GS G LG +DV
Sbjct: 968 LVMDGQVFTFGSFSKGQLGRPILDV 992
Score = 38 (18.4 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 324 DQVSCGWKHTAAI 336
D + CGW T +
Sbjct: 2236 DDIRCGWPTTITV 2248
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 165 (63.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 66/253 (26%), Positives = 111/253 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLGL
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGLIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G G+LG+ + +
Sbjct: 266 PPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGYLLDPN-- 321
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G T+ PR + L + + + + AA + C+ G +Y+ D K+ ++ N
Sbjct: 322 GEKCVTA---PRQVSALHHKDITLSLVAASDGATVCVTTKGDIYLLADYQCKKLASKQLN 378
Query: 277 HARRPSLISGGEL 289
+ L+SGG +
Sbjct: 379 --LKKVLVSGGHM 389
Score = 164 (62.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 44/121 (36%), Positives = 61/121 (50%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SGI+ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 G 263
G
Sbjct: 254 G 254
Score = 154 (59.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 69/243 (28%), Positives = 106/243 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + H+ +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 104 GI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
G+ S N+ ++ + G + ++ ++ G H+ T + +Y G N GQLG
Sbjct: 262 GLIPPPSSCNVPRQMQAKYLKG--RTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGYL 317
Query: 157 LGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L K + P +V L I A +V VT G + +L ++
Sbjct: 318 LDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVTTKGDIYLLADYQCKKLA-SKQ 376
Query: 215 SSILGFLRSTS--EYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
++ L S EY P +KE G K+ I A +D GRV+ + R+V+
Sbjct: 377 LNLKKVLVSGGHMEYKVDPEHLKENGGQKICILA--------MDGAGRVFCW--RSVNSS 426
Query: 271 LFQ 273
+ Q
Sbjct: 427 MKQ 429
Score = 38 (18.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
EL T +E G+GS L SP+ G S+
Sbjct: 1024 ELLT-SDSEGSYAGVGSPRDLQSPDFTTGFHSD 1055
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 134 (52.2 bits), Expect = 0.00014, P = 0.00014
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F H +ALA H L + G + G+ S+ Y +R + VQ
Sbjct: 786 FMNHREQALARIRPHPAQLKHKRDKHKDGSGERGEKDASKITTYPPGAVRFD-CELRAVQ 844
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G+HHS + +G++Y +G +GQLG G ++ PT V+ L G T Q G
Sbjct: 845 VSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQALPGPST-QVTAGSN 901
Query: 188 QSVAVTGGGKVLSWGAGGSGRLG 210
+ + G+V ++G+ G+LG
Sbjct: 902 HTAILLMDGQVFTFGSFSKGQLG 924
Score = 121 (47.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 66/278 (23%), Positives = 115/278 (41%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + + G ++ TG
Sbjct: 450 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIIQFSVGHDGSHALLVADDGSIFFTGSA 509
Query: 99 DFGQLGISENI---GYSLEPLRISGLKKEVVQISTGYHH--SSAITVDGELYMWGKNSNG 153
G+ G S +P +I ++ ++V IST ++ SS I+ DGELYM+GK++
Sbjct: 510 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIV-ISTACNNGSSSVISKDGELYMFGKDA-- 566
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-- 211
+ + ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 567 ---IYSDSTSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 617
Query: 212 ---GQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGD-R 265
Q G + L +EL+ K + G +H +++ + GD
Sbjct: 618 GSMSQGGKGFGVENMATAMDEDLEEELDEKDEKSMMCPPG-MHKWKLEQCMVCTVCGDCT 676
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 677 GYGASCVSSG----RPDRVPGG-ICGCGSGESGCAVCG 709
Score = 106 (42.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 57/211 (27%), Positives = 91/211 (43%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SA+ T G++Y GK + LG+ G A K +
Sbjct: 416 LEKDLHIISTGFDEESAVLGAGREFALMKTASGKIYYTGKYQS--LGIKQGGPSAGKWVE 473
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + Q ++G + S A V G + G+ G G +S R
Sbjct: 474 LPITKSPKII-----QFSVGHDGSHALLVADDGSIFFTGSASKGEDGESTKSR-----RQ 523
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV--DK--MLFQEGNH-- 277
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ D ++ H
Sbjct: 524 SKPYKPKKIIKMEGKIVISTACNNGSSSVISKDGELYMFGKDAIYSDSTSLVTDLKGHFV 583
Query: 278 -------ARRPSLISGGELYTWGSNENGCLG 301
A L+ GE++T+G N G G
Sbjct: 584 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 614
Score = 95 (38.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L+ G++YT+G ++G LG G ++ P VQ P QV+ G HTA + +G++
Sbjct: 855 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQVTAGSNHTAILLMDGQV 912
Query: 342 LTWG 345
T+G
Sbjct: 913 FTFG 916
Score = 93 (37.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
GS E G I + P V+ V QVSCG+ H+ + E G + T+G+G HG
Sbjct: 814 GSGERGEKDASKITT-YPPGAVRFDCELRAV-QVSCGFHHSVILMENGDVYTFGYG-QHG 870
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
QLGHG+ PT+V + QV+ G NHT LL
Sbjct: 871 -----------QLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAILL 907
Score = 75 (31.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 356 DGHSSG-GQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D H G G+ G + + P V F ++A+QVSCGF+H+ L+E
Sbjct: 809 DKHKDGSGERGEKDASKITTYPPGAVRFDCELRAVQVSCGFHHSVILME 857
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 164 (62.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 44/121 (36%), Positives = 61/121 (50%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SGI+ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 G 263
G
Sbjct: 254 G 254
Score = 162 (62.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 65/253 (25%), Positives = 107/253 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G G+LG +L
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLG-----CLL 318
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
PR + L + + + + AA + C+ G +Y+ D KM ++ N
Sbjct: 319 DPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLN 378
Query: 277 HARRPSLISGGEL 289
+ L+SGG +
Sbjct: 379 --LKKVLVSGGHM 389
Score = 156 (60.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 70/243 (28%), Positives = 106/243 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + H+ +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 104 GI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
GI S N+ ++ + G + ++ ++ G H+ T + +Y G N GQLG
Sbjct: 262 GIIPPPSSCNVPRQIQAKYLKG--RTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGCL 317
Query: 157 LGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L K + P +V L I A +V VT G + ++ ++
Sbjct: 318 LDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMA-SKQ 376
Query: 215 SSILGFLRSTS--EYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
++ L S EY P +KE G K+ I A +D GRV+ + R+V+
Sbjct: 377 LNLKKVLVSGGHMEYKVDPEHLKENGGQKICILA--------MDGAGRVFCW--RSVNSS 426
Query: 271 LFQ 273
L Q
Sbjct: 427 LKQ 429
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
EL T +E G+GS L SP+ G S+
Sbjct: 1024 ELLT-SDSEGSYAGVGSPRDLQSPDFTTGFHSD 1055
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 119 (46.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 66/277 (23%), Positives = 111/277 (40%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 425 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 484
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 485 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 541
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--- 211
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 542 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 593
Query: 212 --GQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGD-RA 266
Q G + L +EL+ K + G +H +++ + GD
Sbjct: 594 AMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMCPPG-MHKWKLEQCMVCTVCGDCTG 652
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 653 YGASCVSSG----RPDRVPGG-ICGCGSGESGCAVCG 684
Score = 104 (41.7 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 55/211 (26%), Positives = 90/211 (42%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SA+ T +G++Y GK + LG+ G A K +
Sbjct: 391 LEKDLHIISTGFDEESAVLGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 448
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G + G+ G G +S R
Sbjct: 449 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQ 498
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNH-- 277
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ H
Sbjct: 499 SKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFV 558
Query: 278 -------ARRPSLISGGELYTWGSNENGCLG 301
A L+ GE++T+G N G G
Sbjct: 559 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 589
Score = 96 (38.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L+ G++YT+G ++G LG G ++ P VQ P QV+ G HTA + +G++
Sbjct: 830 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQVTAGSNHTAVLLMDGQV 887
Query: 342 LTWG 345
T+G
Sbjct: 888 FTFG 891
Score = 95 (38.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
GS E G I + P V+ V QVSCG+ H+ + E G + T+G+G HG
Sbjct: 789 GSGERGEKDASKITT-YPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYG-QHG 845
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
QLGHG+ PT+V + QV+ G NHT LL
Sbjct: 846 -----------QLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLL 882
Score = 75 (31.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 356 DGHSSG-GQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D H G G+ G + + P V F ++A+QVSCGF+H+ L+E
Sbjct: 784 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME 832
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 140 (54.3 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + G + G+ S+ Y
Sbjct: 834 LEEGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYPP 893
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 894 GSVRFD-CELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 950
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T Q G + + G+V ++G+ G+LG
Sbjct: 951 LPGPST-QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 119 (46.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 66/277 (23%), Positives = 111/277 (40%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 512 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 571
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 572 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 628
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--- 211
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 629 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 680
Query: 212 --GQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGD-RA 266
Q G + L +EL+ K + G +H +++ + GD
Sbjct: 681 AMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMCPPG-MHKWKLEQCMVCTVCGDCTG 739
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 740 YGASCVSSG----RPDRVPGG-ICGCGSGESGCAVCG 771
Score = 105 (42.0 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 56/211 (26%), Positives = 90/211 (42%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SAI T +G++Y GK + LG+ G A K +
Sbjct: 478 LEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 535
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G + G+ G G +S R
Sbjct: 536 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQ 585
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNH-- 277
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ H
Sbjct: 586 SKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFV 645
Query: 278 -------ARRPSLISGGELYTWGSNENGCLG 301
A L+ GE++T+G N G G
Sbjct: 646 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 96 (38.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L+ G++YT+G ++G LG G ++ P VQ P QV+ G HTA + +G++
Sbjct: 917 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQVTAGSNHTAVLLMDGQV 974
Query: 342 LTWG 345
T+G
Sbjct: 975 FTFG 978
Score = 95 (38.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
GS E G I + P V+ V QVSCG+ H+ + E G + T+G+G HG
Sbjct: 876 GSGERGEKDASKITT-YPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYG-QHG 932
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
QLGHG+ PT+V + QV+ G NHT LL
Sbjct: 933 -----------QLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLL 969
Score = 75 (31.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 356 DGHSSG-GQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D H G G+ G + + P V F ++A+QVSCGF+H+ L+E
Sbjct: 871 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME 919
Score = 38 (18.4 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 324 DQVSCGWKHTAAI 336
D + CGW T +
Sbjct: 2239 DDIRCGWPTTITV 2251
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 140 (54.3 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + G + G+ S+ Y
Sbjct: 834 LEEGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYPP 893
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 894 GSVRFD-CELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 950
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T Q G + + G+V ++G+ G+LG
Sbjct: 951 LPGPST-QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 119 (46.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 66/277 (23%), Positives = 111/277 (40%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 512 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 571
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 572 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 628
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--- 211
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 629 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 680
Query: 212 --GQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGD-RA 266
Q G + L +EL+ K + G +H +++ + GD
Sbjct: 681 AMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMCPPG-MHKWKLEQCMVCTVCGDCTG 739
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 740 YGASCVSSG----RPDRVPGG-ICGCGSGESGCAVCG 771
Score = 101 (40.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 54/209 (25%), Positives = 88/209 (42%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ---------LGL---GKKAAKVIPIP 168
L+K++ ISTG+ SA+ G + K S+G+ LG+ G A K + +P
Sbjct: 478 LEKDLHIISTGFDEESAVLGAGREFALMKTSSGKIYYTGKYQSLGIKQGGPSAGKWVELP 537
Query: 169 -TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
TK + ++G + S A V G + G+ G G +S R +
Sbjct: 538 ITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQSK 587
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNH---- 277
Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ H
Sbjct: 588 PYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQ 647
Query: 278 -----ARRPSLISGGELYTWGSNENGCLG 301
A L+ GE++T+G N G G
Sbjct: 648 VAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 96 (38.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L+ G++YT+G ++G LG G ++ P VQ P QV+ G HTA + +G++
Sbjct: 917 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQVTAGSNHTAVLLMDGQV 974
Query: 342 LTWG 345
T+G
Sbjct: 975 FTFG 978
Score = 95 (38.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
GS E G I + P V+ V QVSCG+ H+ + E G + T+G+G HG
Sbjct: 876 GSGERGEKDASKITT-YPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYG-QHG 932
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
QLGHG+ PT+V + QV+ G NHT LL
Sbjct: 933 -----------QLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLL 969
Score = 75 (31.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 356 DGHSSG-GQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D H G G+ G + + P V F ++A+QVSCGF+H+ L+E
Sbjct: 871 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME 919
Score = 38 (18.4 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 324 DQVSCGWKHTAAI 336
D + CGW T +
Sbjct: 2239 DDIRCGWPTTITV 2251
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 140 (54.3 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + G + G+ S+ Y
Sbjct: 872 LEEGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYPP 931
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 932 GSVRFD-CELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 988
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T Q G + + G+V ++G+ G+LG
Sbjct: 989 LPGPST-QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 119 (46.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 66/277 (23%), Positives = 111/277 (40%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 550 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 609
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 610 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 666
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--- 211
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 667 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 718
Query: 212 --GQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGD-RA 266
Q G + L +EL+ K + G +H +++ + GD
Sbjct: 719 AMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMCPPG-MHKWKLEQCMVCTVCGDCTG 777
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 778 YGASCVSSG----RPDRVPGG-ICGCGSGESGCAVCG 809
Score = 105 (42.0 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 56/211 (26%), Positives = 90/211 (42%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SAI T +G++Y GK + LG+ G A K +
Sbjct: 516 LEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 573
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G + G+ G G +S R
Sbjct: 574 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQ 623
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNH-- 277
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ H
Sbjct: 624 SKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFV 683
Query: 278 -------ARRPSLISGGELYTWGSNENGCLG 301
A L+ GE++T+G N G G
Sbjct: 684 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 96 (38.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L+ G++YT+G ++G LG G ++ P VQ P QV+ G HTA + +G++
Sbjct: 955 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQVTAGSNHTAVLLMDGQV 1012
Query: 342 LTWG 345
T+G
Sbjct: 1013 FTFG 1016
Score = 95 (38.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
GS E G I + P V+ V QVSCG+ H+ + E G + T+G+G HG
Sbjct: 914 GSGERGEKDASKITT-YPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYG-QHG 970
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
QLGHG+ PT+V + QV+ G NHT LL
Sbjct: 971 -----------QLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLL 1007
Score = 75 (31.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 356 DGHSSG-GQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D H G G+ G + + P V F ++A+QVSCGF+H+ L+E
Sbjct: 909 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME 957
Score = 38 (18.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 324 DQVSCGWKHTAAI 336
D + CGW T +
Sbjct: 2277 DDIRCGWPTTITV 2289
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 119 (46.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 66/277 (23%), Positives = 111/277 (40%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 550 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 609
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 610 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 666
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--- 211
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 667 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 718
Query: 212 --GQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGD-RA 266
Q G + L +EL+ K + G +H +++ + GD
Sbjct: 719 AMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMCPPG-MHKWKLEQCMVCTVCGDCTG 777
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 778 YGASCVSSG----RPDRVPGG-ICGCGSGESGCAVCG 809
Score = 101 (40.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 54/209 (25%), Positives = 88/209 (42%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ---------LGL---GKKAAKVIPIP 168
L+K++ ISTG+ SA+ G + K S+G+ LG+ G A K + +P
Sbjct: 516 LEKDLHIISTGFDEESAVLGAGREFALMKTSSGKIYYTGKYQSLGIKQGGPSAGKWVELP 575
Query: 169 -TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
TK + ++G + S A V G + G+ G G +S R +
Sbjct: 576 ITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQSK 625
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNH---- 277
Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ H
Sbjct: 626 PYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQ 685
Query: 278 -----ARRPSLISGGELYTWGSNENGCLG 301
A L+ GE++T+G N G G
Sbjct: 686 VAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 96 (38.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L+ G++YT+G ++G LG G ++ P VQ P QV+ G HTA + +G++
Sbjct: 955 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQVTAGSNHTAVLLMDGQV 1012
Query: 342 LTWG 345
T+G
Sbjct: 1013 FTFG 1016
Score = 95 (38.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
GS E G I + P V+ V QVSCG+ H+ + E G + T+G+G HG
Sbjct: 914 GSGERGEKDASKITT-YPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYG-QHG 970
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
QLGHG+ PT+V + QV+ G NHT LL
Sbjct: 971 -----------QLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLL 1007
Score = 75 (31.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 356 DGHSSG-GQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D H G G+ G + + P V F ++A+QVSCGF+H+ L+E
Sbjct: 909 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME 957
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 158 (60.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 43/121 (35%), Positives = 60/121 (49%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y WG N+N LG G + +K P + S ++ KQ L SV ++ G+V + G
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGRGGRLGHGDEQTCL---------VPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 G 263
G
Sbjct: 254 G 254
Score = 131 (51.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 39/119 (32%), Positives = 55/119 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + HS +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQL 261
Query: 104 GISENIGYSLEPLRIS-GLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GI P +++ +KK V + + + + G NS G LG+ +K
Sbjct: 262 GIIPPPSSCNVPRQLTVRMKKGHTVVCRKAWRFWQVLWTSEDFLVLGLNS-GHLGILRK 319
Score = 121 (47.7 bits), Expect = 0.00094, P = 0.00094
Identities = 40/118 (33%), Positives = 56/118 (47%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV---DQVSCGWKHTAAISE-GKILT 343
E+YTWG N N LG GS + H PE + FS S V V C + H+ +S+ G++ T
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLD-LFSRSRVYVKQVVLCKF-HSVFLSQQGQVYT 200
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G H GG+LGHG++ + P +V QV+ +HT L E
Sbjct: 201 CG------------HGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTE 246
Score = 41 (19.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
A+ S+ S EL T +E G+GS L SP+ G S+
Sbjct: 1015 AKTNSVESLPELLT-SDSEGSYAGVGSPRDLQSPDFTAGFHSD 1056
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 137 (53.3 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 49/185 (26%), Positives = 84/185 (45%)
Query: 46 GDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ LG + +P FE+ LK L GG H+ LT G VY G+N+ G +
Sbjct: 158 GEGEALGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCGINEKGTV 217
Query: 104 ---GISENIGYSLEPLRIS---GLKKE--VVQISTGYHHSSAITVDGELYMWG--KNSNG 153
G+ E G + E ++ ++KE +V ++ G ++A+T G + WG +NSNG
Sbjct: 218 PAEGV-EKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNG 276
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ + K+ P + + + A G V + G +L++G G G+LG
Sbjct: 277 NVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSS 336
Query: 214 ESSIL 218
+ +
Sbjct: 337 RTKTI 341
Score = 84 (34.6 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK------VIPIPTKVEC 173
G ++ V I G H + DG+++ GKN++ LGLG K + ++E
Sbjct: 432 GAERTFVNIE-GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEF 490
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
S I A L S+A + G +WG +G+LG G
Sbjct: 491 DSKIVGVSAKLA--TSIAWSEDGTAYAWGFDTTGQLGLG 527
Score = 78 (32.5 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 30/109 (27%), Positives = 47/109 (43%)
Query: 5 SLTAMTKYYLKQDIKLGSKLGICKRWISST--LQRRFAAL-WGN--GDYGRLGLGSLESR 59
S K ++DI+ K+ + S T L + + + WGN G + + L +
Sbjct: 227 STDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHK 286
Query: 60 WR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
+ PVV K + +A G H + L E GC+ G + GQLG S
Sbjct: 287 MQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRS 335
Score = 52 (23.4 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 287 GELYTWGSNENGCLGIGSID----VLHSPERVQGPFSES-PVDQVSCGWKHTAAISE 338
G Y WG + G LG+G D ++ PE + + + S +HT I++
Sbjct: 511 GTAYAWGFDTTGQLGLGLKDEDEKMVSKPEEISSAHLDGYSIIGASISDQHTLIIAK 567
Score = 49 (22.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/116 (24%), Positives = 45/116 (38%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPER-VQGPFSESPVDQVSCGWKHTAAISEGKILT 343
S G+++ G N + LG+G+ + + E D G A S +
Sbjct: 451 SDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKLATS----IA 506
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
W GT G + GQLG G D D +V+ E + + + G++ GA
Sbjct: 507 WS---EDGTAYAWGFDTTGQLGLGLKDED---EKMVSKPEEISSAHLD-GYSIIGA 555
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 150 (57.9 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 67/234 (28%), Positives = 109/234 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
G G GRLG G +R+ VC + ++A G HTL +TE G +++ G N F
Sbjct: 450 GFGPGGRLGTGDESTRFS-FVCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKF 508
Query: 101 GQLGIS-------ENIGYSLEPLRI-SGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNS 151
GQLG +++ L P +I + KKEV+ + HS + G LY +GKN
Sbjct: 509 GQLGYGLPRANNKDDVPVQLSPRQIFNPFKKEVILGAAASAVHSVVYSTSG-LYTFGKNE 567
Query: 152 NGQLGLGKKAAKVIPIPTKVECL-SGIFTK--QAALGFEQSVAVT-GGGKVLSWGAGGSG 207
GQLGL A+ + + T + + +F+ Q+ +Q+ A+ +V + G
Sbjct: 568 -GQLGLVDSDARSLEVQTTPRRVGASLFSTPIQSVSATDQATAILLQNHEVWVFAHYGYS 626
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVY 260
RL E + F+R + T R + + VKI + G ++ C + +G V+
Sbjct: 627 RLSFPLEINSR-FIRDSFMAT-RYDTSINRI-VKIRSGG--NTICALSSSGDVF 675
Score = 141 (54.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 55/213 (25%), Positives = 90/213 (42%)
Query: 73 LKALACGGAHTLFLTET--GCVYATGLNDFGQLGIS-ENIGYSLEPLRISGL-KKEVVQI 128
++ LA HT LT+ ++ G G+LG E+ +S + GL K+V +
Sbjct: 425 IQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGDESTRFSFVCIEGGGLANKKVASV 484
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV---IPIPTKVECLSGIFTKQAALG 185
+ G H+ AIT G+++ WG N GQLG G A +P+ + F K+ LG
Sbjct: 485 ALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQLSPRQIFNPFKKEVILG 544
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-----EYTPRLI-KELEGVK 239
S V S SG G+ LG + S + + TPR + L
Sbjct: 545 AAASA-------VHSVVYSTSGLYTFGKNEGQLGLVDSDARSLEVQTTPRRVGASLFSTP 597
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
++ +A +A + +N V++F ++ F
Sbjct: 598 IQSVSATDQATAILLQNHEVWVFAHYGYSRLSF 630
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 140 (54.3 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 46/157 (29%), Positives = 74/157 (47%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + G D G+ S+ Y
Sbjct: 834 LEDGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGDRGEKDASKITTYPP 893
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 894 GSVRFD-CELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 950
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T+ A +V + G +V ++G+ G+LG
Sbjct: 951 LPGPSTQVTACSNHTAVLLMDG-QVFTFGSFSKGQLG 986
Score = 121 (47.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 67/277 (24%), Positives = 110/277 (39%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G V+ TG
Sbjct: 512 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSA 571
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 572 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 628
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--- 211
+ ++ + V L G F Q A+G + + G+V ++G G+ G
Sbjct: 629 --IYSDSSSL------VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 680
Query: 212 --GQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGD-RA 266
Q G + L +EL+ K + G +H +++ + GD
Sbjct: 681 AMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMCPPG-MHKWKLEQCMVCTVCGDCTG 739
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G RP + GG + GS E+GC G
Sbjct: 740 YGASCVSSG----RPDRVPGG-ICGCGSGESGCAVCG 771
Score = 106 (42.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 57/211 (27%), Positives = 92/211 (43%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SAI T +G++Y GK + LG+ G A K +
Sbjct: 478 LEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 535
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G V G+ G G +S R
Sbjct: 536 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSR-----RQ 585
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV---DKMLFQE--GNHA 278
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ L + G+
Sbjct: 586 SKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVSDLKGHFV 645
Query: 279 RRPS--------LISGGELYTWGSNENGCLG 301
+ + L+ GE++T+G N G G
Sbjct: 646 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 87 (35.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L+ G++YT+G ++G LG G ++ P VQ P QV+ HTA + +G++
Sbjct: 917 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQVTACSNHTAVLLMDGQV 974
Query: 342 LTWG 345
T+G
Sbjct: 975 FTFG 978
Score = 85 (35.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 27/77 (35%), Positives = 36/77 (46%)
Query: 325 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
QVSCG+ H+ + E G + T+G+G HG QLGHG+ PT+V
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYG-QHG-----------QLGHGDVNSRGCPTLVQALPG 953
Query: 384 VKALQVSCGFNHTGALL 400
+C NHT LL
Sbjct: 954 PSTQVTACS-NHTAVLL 969
Score = 73 (30.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 356 DGHSSG-GQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D H G G G + + P V F ++A+QVSCGF+H+ L+E
Sbjct: 871 DKHKDGSGDRGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME 919
Score = 38 (18.4 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 324 DQVSCGWKHTAAI 336
D + CGW T +
Sbjct: 2236 DDIRCGWPTTITV 2248
>UNIPROTKB|H0YD20 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 PANTHER:PTHR22870:SF7
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
Ensembl:ENST00000532546 Bgee:H0YD20 Uniprot:H0YD20
Length = 126
Score = 118 (46.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 114 EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
EP R++GL+ + + + G HS+++T GE+Y+WG N +GQL +AA +P+P K+E
Sbjct: 18 EPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA--NEAA-FLPVPQKIE 74
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 118 (46.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQI 128
K L+A A G H + LTE G VY+ G + + G E S P+ + L + V+ +
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPW-RSGPVEICPSS--PILENALVGQYVITV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+TG HS A+T +G YMWG+NS GQ + + + +P P V
Sbjct: 97 ATGSFHSGAVTDNGVAYMWGENSAGQCAVANQ--QYVPEPNPV 137
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 53 LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS 112
+GS ES P+ E + ++ C + + +G V++ GLN+ GQ G +E G
Sbjct: 164 VGSEESPLLPLSFPTSEP--IISIHCSMDTSFVVDSSGAVFSFGLNEDGQCG-NEAYGIQ 220
Query: 113 LEPLRISG-LKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
EP ++ G ++ +Q +G + A + +GE+++WG+ GQ G A I + T
Sbjct: 221 WEPAKVRGDVEGSKIQKVSGSTDTLLACSENGEIFIWGQTEYGQAA-G--ATDEIQLNTS 277
Query: 171 VECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+ + + SV G V WG G LG G E+ L ++ ++
Sbjct: 278 RHVANSLGPIICVDSTQSSVVARNSRGNVFVWGVGV---LGMGPEAESL---KTPTQMDQ 331
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
L +G V +AG + I+E+GR++I+G+
Sbjct: 332 PLF---DGKMVTSVSAGNSCMSAINEDGRLFIWGE 363
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 77/341 (22%), Positives = 144/341 (42%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG-----ISENIGY 111
E+R+ P + F S+K ++ G +LF ++ +Y G+N+ Q+G I++ Y
Sbjct: 53 EARF-PKRIAYFNTKSIKFISSGFGFSLFASKNR-LYGAGINNRFQIGGQLTNINKYQDY 110
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---------LGKKAA 162
+ +I+ E+++IS+G HS T G ++ G N+ GQ G +G + +
Sbjct: 111 YISAKKINIPGDEILEISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEES 169
Query: 163 KVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++P+ PT +S + S V G V S+G G+ G+ G
Sbjct: 170 PLLPLSFPTSEPIIS------IHCSMDTSFVVDSSGAVFSFGLNEDGQCGN----EAYGI 219
Query: 221 LRSTSEYTPRLIK-ELEGVKV-KIAAAGFLHSACIDENGRVYIFGDR-------AVDKML 271
++ P ++ ++EG K+ K++ + AC ENG ++I+G A D++
Sbjct: 220 -----QWEPAKVRGDVEGSKIQKVSGSTDTLLAC-SENGEIFIWGQTEYGQAAGATDEIQ 273
Query: 272 FQEGNHARR---PSL-ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
H P + + + N G + + + VL + + + +DQ
Sbjct: 274 LNTSRHVANSLGPIICVDSTQSSVVARNSRGNVFVWGVGVLGMGPEAESLKTPTQMDQPL 333
Query: 328 CGWKHTAAISEGK--ILTWGWGGSHGTFSEDGHSSGGQLGH 366
K ++S G + G + E+ +SS G LGH
Sbjct: 334 FDGKMVTSVSAGNSCMSAINEDGRLFIWGENRYSSLG-LGH 373
>ASPGD|ASPL0000040680 [details] [associations]
symbol:AN2874 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:BN001306 EMBL:AACD01000051
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_660478.1 ProteinModelPortal:Q5B9A6
EnsemblFungi:CADANIAT00010215 GeneID:2873908 KEGG:ani:AN2874.2
Uniprot:Q5B9A6
Length = 1365
Score = 142 (55.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 62/201 (30%), Positives = 92/201 (45%)
Query: 92 VYATGLNDFGQLGISEN--IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
VY G N GQLG+ + Y +P + + L +VVQ++ G H A+T D ++Y WG
Sbjct: 906 VYVLGENGNGQLGMGNGTPVQYK-QPTKNTQLP-DVVQVAAGGEHCIALTHDNKIYTWGD 963
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-------VTGGGKVLSWG 202
NS+GQLG + +P +V+ S + + F Q VA +T G V WG
Sbjct: 964 NSHGQLGRLTNSMTA-QMPGEVD-FSEVNLPDYTI-FAQVVATRSACFVLTMFGDVYGWG 1020
Query: 203 AGGS-GRLGHG-QESSILGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+G Q LGF + TP I+EL+ VK ++AA A I +
Sbjct: 1021 TFSEIYEDENGEQHCEPLGFRHQCKCQRTPLHIQELQNVK-RLAAGSDHVLAQIS----I 1075
Query: 260 YIFGDRAVDKMLFQEGNHARR 280
I G+RA +G+ R+
Sbjct: 1076 LIGGNRASSSASKMKGSRVRK 1096
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 37/142 (26%), Positives = 61/142 (42%)
Query: 68 FEKHSLKALACGGAHTLFLTETGC-VYATGLNDFGQLGIS--ENIGYSLEPLRISGLKKE 124
FE + + + CGG +T E VY G N +G G+S +NI E ++ KK
Sbjct: 260 FE-NKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQELSQKK- 317
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ Q+ G + + + +LY+WG LG+ P+ + K
Sbjct: 318 INQLCGGQSFTVCLLNNNDLYIWGNREI--LGMEYDDDAYSPLELDFFKKNNYTVKNITC 375
Query: 185 GFEQSVAVTGGGKVLSWGAGGS 206
G + + +T GK+ WG GG+
Sbjct: 376 GTDHCLVLTDNGKLFGWGTGGN 397
Score = 94 (38.1 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES--PVDQVSCGWKHTAAISE-G 339
L++ +LY WG+ E LG+ D +SP + F ++ V ++CG H +++ G
Sbjct: 331 LLNNNDLYIWGNRE--ILGMEYDDDAYSPLELDF-FKKNNYTVKNITCGTDHCLVLTDNG 387
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
K+ WG GG+ F E+ + + +++D+
Sbjct: 388 KLFGWGTGGNE--FDENTSLAVIEKNEPSEIDF 418
Score = 88 (36.0 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLE--PLRIS-GLKKE 124
+ + + CG HT+ T +Y+ G ND G LG S I LE P I+ +
Sbjct: 39 NDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIK-DLEHSPTLINFTFPSK 97
Query: 125 VVQISTGYHHSSAITVDGELYMWG--KNSNGQLGL 157
+ +I+ G +H++ + +G++Y+ G ++ G LGL
Sbjct: 98 IKKITCGDNHTAILLENGKVYITGGFRDYCGVLGL 132
Score = 84 (34.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++ T K+ S+G G LG SS + L E++P LI K+K
Sbjct: 47 GSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDL----EHSPTLINFTFPSKIKKIT 102
Query: 245 AGFLHSACIDENGRVYIFG 263
G H+A + ENG+VYI G
Sbjct: 103 CGDNHTAILLENGKVYITG 121
Score = 73 (30.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 35/147 (23%), Positives = 57/147 (38%)
Query: 101 GQLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQL Y + P I L ++ ++ G H+ T D +LY +G N G LG
Sbjct: 16 GQLPPEYCTDYVQVNPTAIPNLPNDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKT 75
Query: 160 KAAKVIPI---PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ + + PT + K+ G + + GKV G G
Sbjct: 76 YSSGIKDLEHSPTLINFTFPSKIKKITCGDNHTAILLENGKVYITG-------GFRDYCG 128
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIA 243
+LG L S E L K E ++++ +
Sbjct: 129 VLG-LPSFGEKNELLTKSFEFIEIQFS 154
Score = 41 (19.5 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIF 262
E +K+ +G H C+DE+ YIF
Sbjct: 195 EDIKIINIISGEDHLICLDESHE-YIF 220
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 37/142 (26%), Positives = 61/142 (42%)
Query: 68 FEKHSLKALACGGAHTLFLTETGC-VYATGLNDFGQLGIS--ENIGYSLEPLRISGLKKE 124
FE + + + CGG +T E VY G N +G G+S +NI E ++ KK
Sbjct: 260 FE-NKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQELSQKK- 317
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ Q+ G + + + +LY+WG LG+ P+ + K
Sbjct: 318 INQLCGGQSFTVCLLNNNDLYIWGNREI--LGMEYDDDAYSPLELDFFKKNNYTVKNITC 375
Query: 185 GFEQSVAVTGGGKVLSWGAGGS 206
G + + +T GK+ WG GG+
Sbjct: 376 GTDHCLVLTDNGKLFGWGTGGN 397
Score = 94 (38.1 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES--PVDQVSCGWKHTAAISE-G 339
L++ +LY WG+ E LG+ D +SP + F ++ V ++CG H +++ G
Sbjct: 331 LLNNNDLYIWGNRE--ILGMEYDDDAYSPLELDF-FKKNNYTVKNITCGTDHCLVLTDNG 387
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
K+ WG GG+ F E+ + + +++D+
Sbjct: 388 KLFGWGTGGNE--FDENTSLAVIEKNEPSEIDF 418
Score = 88 (36.0 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLE--PLRIS-GLKKE 124
+ + + CG HT+ T +Y+ G ND G LG S I LE P I+ +
Sbjct: 39 NDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIK-DLEHSPTLINFTFPSK 97
Query: 125 VVQISTGYHHSSAITVDGELYMWG--KNSNGQLGL 157
+ +I+ G +H++ + +G++Y+ G ++ G LGL
Sbjct: 98 IKKITCGDNHTAILLENGKVYITGGFRDYCGVLGL 132
Score = 84 (34.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++ T K+ S+G G LG SS + L E++P LI K+K
Sbjct: 47 GSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDL----EHSPTLINFTFPSKIKKIT 102
Query: 245 AGFLHSACIDENGRVYIFG 263
G H+A + ENG+VYI G
Sbjct: 103 CGDNHTAILLENGKVYITG 121
Score = 73 (30.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 35/147 (23%), Positives = 57/147 (38%)
Query: 101 GQLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQL Y + P I L ++ ++ G H+ T D +LY +G N G LG
Sbjct: 16 GQLPPEYCTDYVQVNPTAIPNLPNDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKT 75
Query: 160 KAAKVIPI---PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ + + PT + K+ G + + GKV G G
Sbjct: 76 YSSGIKDLEHSPTLINFTFPSKIKKITCGDNHTAILLENGKVYITG-------GFRDYCG 128
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIA 243
+LG L S E L K E ++++ +
Sbjct: 129 VLG-LPSFGEKNELLTKSFEFIEIQFS 154
Score = 41 (19.5 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIF 262
E +K+ +G H C+DE+ YIF
Sbjct: 195 EDIKIINIISGEDHLICLDESHE-YIF 220
>DICTYBASE|DDB_G0289237 [details] [associations]
symbol:tirA "Toll-Interleukin (TIR) receptor
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0006952 "defense
response" evidence=IMP] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000157 InterPro:IPR002110 Pfam:PF13676
PROSITE:PS50088 PROSITE:PS50104 SMART:SM00248 InterPro:IPR001357
dictyBase:DDB_G0289237 Pfam:PF00533 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007165 GO:GO:0006952 GO:GO:0008283 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GenomeReviews:CM000154_GR GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AAFI02000131
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 SUPFAM:SSF52200 RefSeq:XP_636358.1
ProteinModelPortal:Q54HT1 EnsemblProtists:DDB0232375 GeneID:8627031
KEGG:ddi:DDB_G0289237 eggNOG:NOG261364 InParanoid:Q54HT1
OMA:WRAEITR Uniprot:Q54HT1
Length = 1336
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 52/193 (26%), Positives = 86/193 (44%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV-YATG-LND 99
+WGN + + L ++ CS HS+ + G HT+ L + G + Y G N
Sbjct: 361 IWGNIKSNQK-VEQLADHYQVDYCSVGGSHSV--MIKRGIHTVGLNKFGQLGYKNGNTNC 417
Query: 100 FG-----QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G +L I I S+ + + LKK V+ +S G + +T +G+++ WGKN GQ
Sbjct: 418 IGGGGNNKLMIENQIQRSISIINQNFLKK-VLMVSCGKDFNVLLTNEGQVFSWGKNDQGQ 476
Query: 155 LGLGKKAAK------VIPIPTKVECLSGIFTKQAALGFEQSVAV-----TGGG-KVLSWG 202
LGLG +K ++ + S F + G S+A+ T G ++ WG
Sbjct: 477 LGLGNSDSKENYEIKLVNFDDPYDSNSNKFISFISCGGNHSIAIESNSSTDGNCRLYGWG 536
Query: 203 AGGSGRLGHGQES 215
+ G++G S
Sbjct: 537 SNSQGQIGEKYSS 549
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 130 (50.8 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VVQ++ G HH+ +T+ GE+Y +G N GQLG G + + P +V+ I Q A
Sbjct: 968 VVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGD--LQPVSGPVRVQVPGAI--SQVAA 1023
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLG 210
G +V +T G V ++G G+LG
Sbjct: 1024 GSNHTVLLTSKGMVYTFGNYQKGQLG 1049
Score = 113 (44.8 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L GE+YT+GSN+ G LG G + + P RVQ P + QV+ G HT + S+G +
Sbjct: 981 LTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQVP---GAISQVAAGSNHTVLLTSKGMV 1037
Query: 342 LTWG 345
T+G
Sbjct: 1038 YTFG 1041
Score = 98 (39.6 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 42/169 (24%), Positives = 70/169 (41%)
Query: 157 LGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
L K +V P+ P ++ S Q A G +V +T G+V ++G+ G+LG G
Sbjct: 945 LDKDPPRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQ 1004
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ G +R P I ++ AAG H+ + G VY FG+ ++
Sbjct: 1005 PVSGPVRVQ---VPGAISQV--------AAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPS 1053
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDV--LHSPERVQGPFSESP 322
++ +P GS + G G ++ + PER Q P + P
Sbjct: 1054 DYGLKPPPQDDDSPVGAGS-DGGAGGSPTVAPVGMPGPERSQSPANVQP 1101
Score = 83 (34.3 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 27/109 (24%), Positives = 50/109 (45%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P + + H + AC + F+T+TG + G D + +G+ E L
Sbjct: 697 KPKKMTKIDGHVVVHAACNNGTSAFVTKTGKLIMYG-KDTAHC---DAMGFVSELL---- 748
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKKAAKVIPIP 168
++ V +++ G H A+ G+L+ +G N+ GQ G + K V +P
Sbjct: 749 -EQHVTKVALGKAHCVALNAKGQLFSFGLNNKGQCGRIFNKLQPVKDVP 796
Score = 78 (32.5 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLG-ISENIGY--SLEPLRISGLKKEVVQISTG 131
A+ G H L + + G V+ G G+ G S+N +++P +++ + VV +
Sbjct: 655 AVGHDGIHALLVNDDGTVFFAGTARRGEDGDSSKNRRQPKAVKPKKMTKIDGHVVVHAAC 714
Query: 132 YHHSSA-ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+ +SA +T G+L M+GK++ +G + E L TK ALG V
Sbjct: 715 NNGTSAFVTKTGKLIMYGKDTAHCDAMGFVS----------ELLEQHVTK-VALGKAHCV 763
Query: 191 AVTGGGKVLSWGAGGSGRLG 210
A+ G++ S+G G+ G
Sbjct: 764 ALNAKGQLFSFGLNNKGQCG 783
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 355 EDGHSSGGQLGHGNDV 370
+DGHS+ G+ G G++V
Sbjct: 2174 QDGHSASGRTGDGSNV 2189
Score = 45 (20.9 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 343 TWGWGG 348
TWGWGG
Sbjct: 2903 TWGWGG 2908
Score = 38 (18.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGN 368
G G H T + S GQ G GN
Sbjct: 3989 GTGKDHATGTLGLDQSAGQNGGGN 4012
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 67/312 (21%), Positives = 131/312 (41%)
Query: 42 LWGNGDY--GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
L+G GD G+LG G + + + ++++ G ++ + G + G
Sbjct: 488 LFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGVGNYFSVICCDRGTLLTFGTAK 547
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG+ ++ S +P+ + L +E ++ I G+ H A+ GE WG N GQLGL
Sbjct: 548 --NLGLGKDAKDSAKPMLLEQLLRENIKDIYCGHDHVVAVLESGECLGWGSNQYGQLGL- 604
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ PTKV L+ + AL + + K++ AG + + S++
Sbjct: 605 -PTLEHFFAPTKVFFLN----EATALYGPFQIPMPSNKKIVYGKAGKDATMLLSDDGSLI 659
Query: 219 GFLRSTSEYTPRLIKELEG--VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
++++ + + G K K +++ I + F +R VD F G+
Sbjct: 660 AM--GSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQG-----FPERVVD---FSVGS 709
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGWKHT- 333
+ ++ G++ +G N+N LG+G+ + + V+ + V CG T
Sbjct: 710 Y-HSGVILESGQVMIFGRNDNTELGLGNSQKMAVRCVKPVKSLLHHA-CTHVLCGDGFTL 767
Query: 334 AAISEGKILTWG 345
+ +E ++ WG
Sbjct: 768 VSTTEQELYFWG 779
>ASPGD|ASPL0000075377 [details] [associations]
symbol:AN10609 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001303
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
EnsemblFungi:CADANIAT00005518 HOGENOM:HOG000197481 OMA:QRIECGR
Uniprot:C8V9T3
Length = 575
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 87/331 (26%), Positives = 136/331 (41%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WGN Y + S ES + P S F+ + L+ L G + E G L +
Sbjct: 113 IWGNNKYRVVDPESKESVIKTPRRLSYFDSNVLRDLKLGETSGAAIIENG-----DLVQW 167
Query: 101 GQLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+ G SE +P + ++G K ++ +S + A++ DG++Y + + Q GK
Sbjct: 168 GK-GYSET---EFKPTKTLTG--KNLISLSMSHDRIVALSSDGKVYSLPVSKHDQTS-GK 220
Query: 160 KAAKV--IPIPTKVECLS-GIFTKQAALGFEQSVAVTGG----------GKVLSWGAGGS 206
KA + +P + +S + LG E+ VA++GG G+V S +
Sbjct: 221 KAEEKSWLPFSSGKSSMSYRLIQPILKLG-EKIVAISGGLEHVLLLTSSGRVFSAVSSTE 279
Query: 207 GRLGHGQESSILGFLRSTSEY----TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
GQ + G +T P +K GVKV A G HS + +NG V F
Sbjct: 280 NFPSFGQ-LGVPGLTWATRPPGPVDAPHEVKTPNGVKVAQIATGDYHSLLLTKNGNVLAF 338
Query: 263 GDRAVDKM-LFQEGNHA--RRPSLISGGELYTWGSNENGCLGIGS--------IDVLHSP 311
GD + ++ L + N P+ I LY S G+ + +DV H
Sbjct: 339 GDNSFGQLGLGFDPNSPFLDTPTPILMESLYRDSSRSPRATGVAAGGANSFFTVDV-HQD 397
Query: 312 ERVQGPFSESPV--DQVSCGWKHTAAISEGK 340
+ QG S S V D +CG A+ GK
Sbjct: 398 GQGQGSKSPSKVISDIWTCGRGIWGALGNGK 428
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 49/142 (34%), Positives = 70/142 (49%)
Query: 44 GNGDYGRLGLGSLES-RWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLGL + R+ V V A + + G HT+ +T+ G ++ G N +
Sbjct: 347 GVGRGGRLGLSDDQRVRFTYVPVQGALADRKVTQVVLGQDHTMAVTDKGELWTWGSNAYS 406
Query: 102 QLGIS-------ENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
QLG + + SL P ++ G LKKEVV +S HS A T + ++ WGKNS
Sbjct: 407 QLGYALPPPAKKDEEPMSLAPKQVFGALKKEVVIGVSASAIHSVAHTTNS-VFCWGKNS- 464
Query: 153 GQLGL---GKKAAKVIPIPTKV 171
GQL L ++ +V P KV
Sbjct: 465 GQLALMDADSRSLEVQQTPRKV 486
Score = 124 (48.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 92 VYATGLNDFGQLGISEN--IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
+Y G+ G+LG+S++ + ++ P++ + ++V Q+ G H+ A+T GEL+ WG
Sbjct: 343 LYICGVGRGGRLGLSDDQRVRFTYVPVQGALADRKVTQVVLGQDHTMAVTDKGELWTWGS 402
Query: 150 NSNGQLG--LGKKAAK-VIPIPTKVECLSGIFTKQAALGFE----QSVAVTGGGKVLSWG 202
N+ QLG L A K P+ + + G K+ +G SVA T V WG
Sbjct: 403 NAYSQLGYALPPPAKKDEEPMSLAPKQVFGALKKEVVIGVSASAIHSVAHTTNS-VFCWG 461
Query: 203 AGGSGRL 209
SG+L
Sbjct: 462 KN-SGQL 467
Score = 47 (21.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 289 LYTWGSNENGCLGI-----GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 342
++ WG N +G L + S++V +P +V +P+ VS K T + I+
Sbjct: 457 VFCWGKN-SGQLALMDADSRSLEVQQTPRKVAASLFSAPIVMVSAIDKATTVLLANHIV 514
>UNIPROTKB|G4NDH5 [details] [associations]
symbol:MGG_00913 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:CM001235 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
RefSeq:XP_003718048.1 ProteinModelPortal:G4NDH5
EnsemblFungi:MGG_00913T0 GeneID:2674805 KEGG:mgr:MGG_00913
Uniprot:G4NDH5
Length = 578
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 64/260 (24%), Positives = 105/260 (40%)
Query: 114 EPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK-------AAKVI 165
+P + GL V QI+ G +HS A+ + L+ WG NS+GQLG K +
Sbjct: 309 QPHEVKGLPPAGVSQIAAGNYHSLALDKNSNLHAWGDNSSGQLGFEVNPQSPTIDTPKAV 368
Query: 166 PIPTKVECLSGI----FTKQAALGFEQ-----SVAVTGGGKVLSW--GAGGSGRLGHGQ- 213
P+ T++ G+ T AA G S+ G +W GAG G LG+G+
Sbjct: 369 PL-TRLLTSGGVQRSEITSIAAGGSNSFFTTSSIPANGRPTAEAWSCGAGLQGELGNGKW 427
Query: 214 --ESSILGFLRSTS---EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
S+ +++ S EY R +++ + ++ + G H+A + +N +
Sbjct: 428 IHMSTAPAKMKALSGMAEYDDRT-QQMVPIGIRALSVGTTHAAAVMDN----------LT 476
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
+ G+ R G ++ WG NE LG G + P R+ P S +
Sbjct: 477 SVAAAPGS-GRN----WGSDVMWWGGNEFYQLGTGKRRNVSEPLRI-APLDNSRTGNPAA 530
Query: 329 GWKHTAAISEGKILTWGWGG 348
++ K G GG
Sbjct: 531 ADGQRFQLAPAKTTRIGEGG 550
>SGD|S000004067 [details] [associations]
symbol:FMP25 "Protein required for assembly of respiratory
complex III" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IMP] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
SGD:S000004067 INTERPRO:IPR000408 Pfam:PF00415 EMBL:BK006945
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0031305
EMBL:U53880 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0034551 EMBL:Z73250 EMBL:Z73249 EMBL:AY723844
PIR:S64909 RefSeq:NP_013178.1 ProteinModelPortal:Q08023 SMR:Q08023
DIP:DIP-4474N IntAct:Q08023 MINT:MINT-504101 STRING:Q08023
PaxDb:Q08023 PeptideAtlas:Q08023 EnsemblFungi:YLR077W GeneID:850766
KEGG:sce:YLR077W CYGD:YLR077w HOGENOM:HOG000111193 OMA:KLIEPED
OrthoDB:EOG4ZCXDB NextBio:966924 Genevestigator:Q08023
GermOnline:YLR077W Uniprot:Q08023
Length = 583
Score = 118 (46.6 bits), Expect = 0.00071, P = 0.00071
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV-DGELYMWGKNS 151
+A G FG+LG + +P++I K++ S G H T + E+ WG N
Sbjct: 463 FAFGNGLFGELGNNTFKNSQCDPIKIKSDDKKLTNWSCGSHCVFTETEQENEVIAWGNND 522
Query: 152 NGQLGLGKKA---AKVIPIPTKVEC------LSGIFTKQAALGFEQSVAVTGGGKVLSW 201
+GQLG+GKK AK + IP ++ L I+ + L EQ V G L W
Sbjct: 523 HGQLGIGKKTMKCAKPMNIPEVLKPGQDTTDLDSIYNSKLHLKKEQRVVTNGNKSCLYW 581
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.137 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 403 403 0.00099 117 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 224
No. of states in DFA: 616 (65 KB)
Total size of DFA: 260 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.25u 0.18s 32.43t Elapsed: 00:00:01
Total cpu time: 32.40u 0.18s 32.58t Elapsed: 00:00:01
Start: Sat May 11 14:29:05 2013 End: Sat May 11 14:29:06 2013
WARNINGS ISSUED: 1